BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10478
(451 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|390333039|ref|XP_001184484.2| PREDICTED: uncharacterized protein LOC754123 [Strongylocentrotus
purpuratus]
Length = 1976
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 199/302 (65%), Gaps = 16/302 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+AIDEAHCVSQWGHDFR +YR L LR LP+VP LA+TATATP+V DIC SL L+
Sbjct: 1096 ITLVAIDEAHCVSQWGHDFRSAYRTLGNLRQLLPEVPFLALTATATPMVQKDICRSLHLK 1155
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P++ T FDRPNLYL +K +D+ DL + F +F+G TIIYCPTK E V
Sbjct: 1156 NPDVTCTSFDRPNLYLQVQLKTNDVENDLANILIETQKFNYEFDGPTIIYCPTKKATESV 1215
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L G++ YHA ++ ++RKE H FV+D ++ +VAT AFGMGIDKPDVR VIHYG
Sbjct: 1216 GSTLKNLGVKADIYHAGMNPERRKENHHKFVRDELQCIVATVAFGMGIDKPDVRNVIHYG 1275
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APKD+ +YYQEIGRAGRDG+ S C+ FY ADF N F + E QEH M+K++
Sbjct: 1276 APKDIESYYQEIGRAGRDGMPSNCFAFYSRADFVL-NWHFVREIKSEEFQEHKAKMIKKI 1334
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVEN 427
E Y++ CRRK +L+HF+ ++ ++ CCDNC+ +LE GG VEN
Sbjct: 1335 EDYVQTSQCRRKLILSHFQHNAKSLLTGS---RDCCDNCKR----KLE----GGEDSVEN 1383
Query: 428 SE 429
S+
Sbjct: 1384 SQ 1385
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 172/268 (64%), Gaps = 16/268 (5%)
Query: 166 DVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKL-- 223
+VP LA+TATATP+V DIC SL L++P++ T FDRPNLYL +K +D+ DL +
Sbjct: 578 EVPFLALTATATPMVQKDICRSLHLKNPDVTCTSFDRPNLYLQVQLKTNDVENDLANILI 637
Query: 224 --TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDL 281
F +F+G TIIYCPTK E V L G++ YHA ++ ++RKE H FV+D
Sbjct: 638 ETQKFNYEFDGPTIIYCPTKKATESVGSTLKNLGVKADIYHAGMNPERRKENHHKFVRDE 697
Query: 282 IKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT 341
++ +VAT AFGMGIDKPDVR VIHYGAPKD+ +YYQEIGRAGRDG+ S C+ FY ADF
Sbjct: 698 LQCIVATVAFGMGIDKPDVRNVIHYGAPKDIESYYQEIGRAGRDGMPSNCFAFYSRADFV 757
Query: 342 KNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDK 401
N F + E QEH M+K++E Y++ CRRK +L+HF+ ++ ++
Sbjct: 758 L-NWHFVREIKSVEFQEHKAKMIKKIEDYVQTSQCRRKLILSHFQHNAKSLLTGS---RD 813
Query: 402 CCDNCRHNEMLELEQVPRGGRMVVENSE 429
CCDNC+ +LE GG VENS+
Sbjct: 814 CCDNCKR----KLE----GGEDSVENSQ 833
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
F + E QEH M+K++E Y++ CRRK +L+HF+ ++ ++ CCDNC
Sbjct: 1314 FVREIKSEEFQEHKAKMIKKIEDYVQTSQCRRKLILSHFQHNAKSLLTGS---RDCCDNC 1370
Query: 63 RQVVYMTPEYVTNNTS 78
++ + + V N+ S
Sbjct: 1371 KRKLEGGEDSVENSQS 1386
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
F + E QEH M+K++E Y++ CRRK +L+HF+ ++ ++ CCDNC
Sbjct: 762 FVREIKSVEFQEHKAKMIKKIEDYVQTSQCRRKLILSHFQHNAKSLLTGS---RDCCDNC 818
Query: 63 RQVVYMTPEYVTNNTS 78
++ + + V N+ S
Sbjct: 819 KRKLEGGEDSVENSQS 834
>gi|193697793|ref|XP_001950864.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Acyrthosiphon pisum]
Length = 785
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/284 (53%), Positives = 193/284 (67%), Gaps = 5/284 (1%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+IV++AIDEAHCVSQWG DFR SYR L +LR LP+VPI+A+TATATP+V DIC SL L
Sbjct: 139 KIVVVAIDEAHCVSQWGFDFRSSYRNLGKLRNILPNVPIMALTATATPIVRKDICNSLNL 198
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKV 247
+P + TGFDR NLY S K+ I DL K + FEG+TIIYCPTK E V
Sbjct: 199 INPKYVCTGFDRKNLYFEVS-KKTSIFVDLNKFMKKNGLKMFFEGATIIYCPTKKQTEAV 257
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L N I+ YHA I L +R +H FVKD +++VVAT AFGMGIDKPDVR VIHYG
Sbjct: 258 AQELKSNRIECEVYHADIPLNKRNTVHENFVKDKLQIVVATVAFGMGIDKPDVRRVIHYG 317
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APKD+ +YYQE+GRAGRDGL ++C+ FY AD N I NL + + H + M K +
Sbjct: 318 APKDIESYYQEVGRAGRDGLPAMCHIFYNQADIVLNRHIMLSNLTNDTYRSHKEKMAKVI 377
Query: 368 EKYLELRTCRRKYLLNHFKG-SSVTVAESQVPPDKCCDNCRHNE 410
E+Y+E R CRR+ LL++F+ SS T +++ + CCDNC +N+
Sbjct: 378 EQYMETRLCRRQLLLSYFEDVSSSTKSDTSIIRTDCCDNCTNNQ 421
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKG-SSVTMAESQVPPDKCCD 60
I NL + + H + M K +E+Y+E R CRR+ LL++F+ SS T +++ + CCD
Sbjct: 356 IMLSNLTNDTYRSHKEKMAKVIEQYMETRLCRRQLLLSYFEDVSSSTKSDTSIIRTDCCD 415
Query: 61 NC 62
NC
Sbjct: 416 NC 417
>gi|405954059|gb|EKC21596.1| Werner syndrome ATP-dependent helicase-like protein [Crassostrea
gigas]
Length = 1136
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/287 (50%), Positives = 188/287 (65%), Gaps = 8/287 (2%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R + LIAIDEAHCVSQWGHDFR +YR L +L+ P VP++A+TATAT V DIC
Sbjct: 375 LDRDVGLDLIAIDEAHCVSQWGHDFRSAYRSLGQLKEAFPQVPVVALTATATQEVRLDIC 434
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTIIYCPTKV 242
SL LRDP+II TGFDRPNL+L+ +K D D+ + + K N N F+G TIIYCPTK
Sbjct: 435 RSLKLRDPSIICTGFDRPNLFLSVGLKTDTAFDLRSQMTKQGNKFN-FDGPTIIYCPTKK 493
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
V ++ I + PYHA +S R + H FV D ++V++AT AFGMGIDKPDVR
Sbjct: 494 ATNDVAAIVKGMNIPSAPYHAGLSQADRNKAHRQFVNDQVQVIIATVAFGMGIDKPDVRK 553
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHYGAPKD+ +YYQE+GRAGRDGL S C+ FY DF + F + + + +EH
Sbjct: 554 VIHYGAPKDIESYYQEVGRAGRDGLPSQCHVFYTEKDFLTSRH-FISEVQNEKFREHKMK 612
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
M+ ++++YL+ TCRR+ LL+HF+ + CCDNCR N
Sbjct: 613 MLGKMQQYLKTTTCRRRLLLSHFENKKLDDIGGTT---NCCDNCRKN 656
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
F + + + +EH M+ ++++YL+ TCRR+ LL+HF+ + CCDNC
Sbjct: 597 FISEVQNEKFREHKMKMLGKMQQYLKTTTCRRRLLLSHFENKKLDDIGGTT---NCCDNC 653
Query: 63 RQ 64
R+
Sbjct: 654 RK 655
>gi|198432737|ref|XP_002131753.1| PREDICTED: similar to FFA-1 protein [Ciona intestinalis]
Length = 1194
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/328 (48%), Positives = 206/328 (62%), Gaps = 26/328 (7%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R I LIAIDEAHCVSQWGHDFR +YR L L+ LP VPI+A+TATATP V DIC
Sbjct: 367 LNRNVGISLIAIDEAHCVSQWGHDFRAAYRNLGRLKTILPKVPIIALTATATPEVRKDIC 426
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN-------QFEGSTIIYC 238
SL L++ I T FDR NLYL K D ADLR L + FEG TIIYC
Sbjct: 427 NSLHLKNALITCTSFDRVNLYLDVYKKSGDPAADLRGLMKQKTVRNKTVYSFEGPTIIYC 486
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
PTK K+ + G++ YHA IS+++R E H FV+D ++ +VAT AFGMGIDKP
Sbjct: 487 PTKKDTAKLGQAVKSLGVRCLIYHAGISMERRSEAHHKFVRDEVECIVATVAFGMGIDKP 546
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR +IHYGAPKD+ +YYQEIGRAGRDGL + C+TF+ + DF N F +++ ++ ++
Sbjct: 547 DVRKIIHYGAPKDIESYYQEIGRAGRDGLPATCHTFFTSGDFN-TNRFFLRDISSAKFKD 605
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCRHNEMLELEQV 417
H M+ ++E+YL +CRRK +L+HF AES + +KCCDNCR +Q+
Sbjct: 606 HKAGMILKMEQYLTTTSCRRKAVLSHFDKR----AESSIFGTEKCCDNCRSRS----KQL 657
Query: 418 PRGGRMVVENSEVWMSTEARPGREAFEF 445
+G + VEN A P E F+F
Sbjct: 658 -KGMGLSVEN--------ATPVEEEFDF 676
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 2 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCD 60
F +++ ++ ++H M+ ++E+YL +CRRK +L+HF AES + +KCCD
Sbjct: 593 FFLRDISSAKFKDHKAGMILKMEQYLTTTSCRRKAVLSHFD----KRAESSIFGTEKCCD 648
Query: 61 NCR 63
NCR
Sbjct: 649 NCR 651
>gi|49118127|gb|AAH73087.1| FFA-1 protein [Xenopus laevis]
Length = 1434
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/282 (49%), Positives = 190/282 (67%), Gaps = 7/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S+WGHDFR +YR L L+ LP+VPI+A+TATA+P + +DI SL L
Sbjct: 603 ITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPNVPIVALTATASPSIREDITKSLNLH 662
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQ-----FEGSTIIYCPTKVICEK 246
+P + T FDRPNLYL + K +I DLR+ + Q FEG+TI+YCPT+ E+
Sbjct: 663 NPQVTCTSFDRPNLYLDVARKTTNISIDLRQFLIKKQQGSGWEFEGATIVYCPTRKTSEQ 722
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V L + GI YHA + +KQR+E+H F++D I+ VVAT AFGMGI+KPD+R VIHY
Sbjct: 723 VTAELIKLGIACGTYHAGMGIKQRREVHHRFMRDEIQCVVATVAFGMGINKPDIRKVIHY 782
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
GAPK++ +YYQEIGRAGRDGL S C+ + AD N + + + +E+ M+ +
Sbjct: 783 GAPKEMESYYQEIGRAGRDGLPSCCHALWTQADMNFNRHML-GEIPNKGFREYKLKMLTK 841
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL TCRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 842 MEKYLNSSTCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 883
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 12 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+E+ M+ ++EKYL TCRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 831 FREYKLKMLTKMEKYLNSSTCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 883
>gi|148227808|ref|NP_001081838.1| Werner syndrome ATP-dependent helicase homolog [Xenopus laevis]
gi|29428101|sp|O93530.1|WRN_XENLA RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN; AltName:
Full=Focus-forming activity 1; Short=FFA-1
gi|3420291|gb|AAC63512.1| focus forming activity 1 [Xenopus laevis]
Length = 1436
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/282 (49%), Positives = 189/282 (67%), Gaps = 7/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S+WGHDFR +YR L L+ LP+VPI+A+TATA+P + +DI SL L
Sbjct: 603 ITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPNVPIVALTATASPSIREDITKSLNLH 662
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQ-----FEGSTIIYCPTKVICEK 246
+P + T FDRPNLYL + K +I DLR+ + Q FEG+TI+YCPT+ E+
Sbjct: 663 NPQVTCTSFDRPNLYLDVARKTTNISIDLRQFLIKKQQGSGWEFEGATIVYCPTRKTSEQ 722
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V L + GI YHA + +KQR+E+H F++D I VVAT AFGMGI+KPD+R VIHY
Sbjct: 723 VTAELIKLGIACGTYHAGMGIKQRREVHHRFMRDEIHCVVATVAFGMGINKPDIRKVIHY 782
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
GAPK++ +YYQEIGRAGRDGL S C+ + AD N + + + +E+ M+ +
Sbjct: 783 GAPKEMESYYQEIGRAGRDGLPSCCHALWAQADMNFNRHML-GEIPNKGFREYKLKMLTK 841
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL TCRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 842 MEKYLNSSTCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 883
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 12 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+E+ M+ ++EKYL TCRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 831 FREYKLKMLTKMEKYLNSSTCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 883
>gi|301619865|ref|XP_002939304.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Xenopus
(Silurana) tropicalis]
Length = 1431
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/281 (49%), Positives = 189/281 (67%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S+WGHDFR +YR L L+ LP VPI+A+TATA+P + +DI SL L
Sbjct: 601 ITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPTVPIVALTATASPSIREDISKSLSLH 660
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL + K +I DL+ K +FEG+TI+YCPT+ E+V
Sbjct: 661 NPQITCTSFDRPNLYLDVAKKTTNISTDLQQFLIKKQGSGWEFEGATIVYCPTRKTSEQV 720
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L++ GI YHA + +KQR+++H F++D I+ VVAT AFGMGI+KPD+R VIHYG
Sbjct: 721 TAELTKLGIACGTYHAGMGIKQRRDVHHRFMRDEIQCVVATVAFGMGINKPDIRKVIHYG 780
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + N+S +E+ M+ ++
Sbjct: 781 APKEMESYYQEIGRAGRDGLPSCCHALWTQADINFNRHMLGEIPNNS-FREYKLKMLTKM 839
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 840 EKYLNSSNCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 880
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 9 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++ +E+ M+ ++EKYL CRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 825 NNSFREYKLKMLTKMEKYLNSSNCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 880
>gi|89267461|emb|CAJ83573.1| Werner syndrome homolog (human) [Xenopus (Silurana) tropicalis]
Length = 1171
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/281 (49%), Positives = 189/281 (67%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S+WGHDFR +YR L L+ LP VPI+A+TATA+P + +DI SL L
Sbjct: 594 ITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPTVPIVALTATASPSIREDISKSLSLH 653
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL + K +I DL+ K +FEG+TI+YCPT+ E+V
Sbjct: 654 NPQITCTSFDRPNLYLDVAKKTTNISTDLQQFLIKKQGSGWEFEGATIVYCPTRKTSEQV 713
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L++ GI YHA + +KQR+++H F++D I+ VVAT AFGMGI+KPD+R VIHYG
Sbjct: 714 TAELTKLGIACGTYHAGMGIKQRRDVHHRFMRDEIQCVVATVAFGMGINKPDIRKVIHYG 773
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + N+S +E+ M+ ++
Sbjct: 774 APKEMESYYQEIGRAGRDGLPSCCHALWTQADINFNRHMLGEIPNNS-FREYKLKMLTKM 832
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 833 EKYLNSSNCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 873
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 9 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++ +E+ M+ ++EKYL CRRK +L+HF+ + A S + +KCCDNC+
Sbjct: 818 NNSFREYKLKMLTKMEKYLNSSNCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCK 873
>gi|157134860|ref|XP_001656478.1| werner syndrome helicase [Aedes aegypti]
gi|108881338|gb|EAT45563.1| AAEL003152-PA [Aedes aegypti]
Length = 968
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 185/277 (66%), Gaps = 9/277 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++VLIAIDEAHC+S+WGHDFRP+YR L +R P VPILAVTATATP V DDI TSL L
Sbjct: 136 QLVLIAIDEAHCLSKWGHDFRPAYRNLGVIRKWCPRVPILAVTATATPNVRDDIVTSLGL 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQD-DIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+P ++ TGFDRPNL +K I D++ L EGS IIYC T+ E++ +
Sbjct: 196 WNPQVLCTGFDRPNLQFHVKMKSSLGIWEDVKGL--LSRNVEGSIIIYCLTRKQTEEIVE 253
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L I PYHA + LKQR+E+H FV+D ++++VAT AFGMGIDKPDVR V+HYGA
Sbjct: 254 LLRSKKIDCEPYHAGLGLKQRREVHESFVRDRVQIIVATIAFGMGIDKPDVRLVVHYGAS 313
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
KDL +YYQE GRAGRDG S C F+ ADF + ++ + N +Q++ + + K++ +
Sbjct: 314 KDLESYYQEAGRAGRDGQPSKCVMFWSRADFKTHEILREH--NQGGVQKNLEALSKKMYE 371
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
YL+ R CRR ++L +F+G V V P CCDNC
Sbjct: 372 YLDTRDCRRMFILKYFEGDVVKVD----PRKNCCDNC 404
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 8 NDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVV 66
N +Q++ + + K++ +YL+ R CRR ++L +F+G V + P CCDNC ++V
Sbjct: 354 NQGGVQKNLEALSKKMYEYLDTRDCRRMFILKYFEGDVVKVD----PRKNCCDNCDRIV 408
>gi|449676970|ref|XP_002163880.2| PREDICTED: uncharacterized protein LOC100213322 [Hydra
magnipapillata]
Length = 802
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 206/359 (57%), Gaps = 56/359 (15%)
Query: 57 KCCDNCRQVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRL 116
K D ++VY+TPEY+TN+ SFL + + +L
Sbjct: 491 KVFDGYYRLVYVTPEYITNSESFLKDLDK-----------------------------KL 521
Query: 117 PLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATA 176
L L+AIDEAHCVSQWGHDFR SYR L +R +P VPI+A+TATA
Sbjct: 522 GL--------------TLVAIDEAHCVSQWGHDFRLSYRKLHLIRKLIPSVPIIALTATA 567
Query: 177 TPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN-------Q 229
TP+V +DIC +L++R I TGFDR NLYL K DL L EN +
Sbjct: 568 TPLVRNDICNNLLMRKAIIRCTGFDRKNLYLEVRNKVS-AHHDLTSLMIEENLNGVRKYR 626
Query: 230 FEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATC 289
F G+TI+YCPTK E++ + L G+ PYHA ++L QRK+ H F++D + +VAT
Sbjct: 627 FCGTTIVYCPTKKKVEEIANTLIGFGLTCEPYHAGLTLPQRKKTHNKFIRDELDCIVATV 686
Query: 290 AFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQP 349
AFGMGIDKPD+R VIHYGAP+D+ +YYQEIGRAGRDG S CY FY ADF N F
Sbjct: 687 AFGMGIDKPDIRMVIHYGAPRDIESYYQEIGRAGRDGQPSFCYAFYNCADFAINRY-FLA 745
Query: 350 NLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ D + +E+ M+ ++E+YL +CRR +L HF S + S D CCDNCR+
Sbjct: 746 EVTDPKFKEYKNEMITKMEQYLMTSSCRRDAILAHFDPS---IKNSGGHKD-CCDNCRN 800
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
F + D + +E+ M+ ++E+YL +CRR +L HF S + S D CCDNC
Sbjct: 743 FLAEVTDPKFKEYKNEMITKMEQYLMTSSCRRDAILAHFDPS---IKNSGGHKD-CCDNC 798
Query: 63 RQ 64
R
Sbjct: 799 RN 800
>gi|355779620|gb|EHH64096.1| hypothetical protein EGM_17222, partial [Macaca fascicularis]
Length = 1237
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 186/281 (66%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATAT + +DI L LR
Sbjct: 466 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATATSSIREDIVRCLNLR 525
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P II TGFDRPNLYL K +I+ DL+ K T+ +FEG TIIYCP++ + E+V
Sbjct: 526 NPQIICTGFDRPNLYLEVRRKTGNILQDLQPFLVKTTSSHWEFEGPTIIYCPSRKMTEQV 585
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S +RK++H FV+D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 586 TAELRKLNLSCETYHAGMSFSRRKDVHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYG 645
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 646 APKEMESYYQEIGRAGRDGLQSSCHILWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKM 704
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVP-PDKCCDNCR 407
EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 705 EKYLHSSRCRRQIILSHFEDKQVQKASLGITGTEKCCDNCR 745
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVP-PDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 700 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGITGTEKCCDNCR 745
>gi|109504268|ref|XP_001059940.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform 1
[Rattus norvegicus]
gi|392354016|ref|XP_002728460.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Rattus
norvegicus]
Length = 1400
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 192/283 (67%), Gaps = 10/283 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRTLGSLKTALPLVPVIALSATASSSIREDIIRCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP+I TGFDRPNLYL K +I+ DL+ + T+ +FEG TIIYCP++ + E+V
Sbjct: 686 DPHITCTGFDRPNLYLEVERKTGNILQDLKPFLVRKTSSAWEFEGPTIIYCPSRKVTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + + YHA + + +RK+IH F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TVELGKLNVACQAYHAGMKISERKDIHHRFLRDEIQCVVATIAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF--TKNNMIFQPNLNDSEIQEHSKTMMK 365
APK++ +YYQEIGRAGRDGL S C+ + ADF T+N +I +++ + + H MM
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTTRNRLI---EIHNEKFRLHKLKMMV 862
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
++EKYL CRR+ +L+HF+ + A V +KCCDNCR
Sbjct: 863 KMEKYLHSSRCRRQIILSHFEDKRLQKASLAVMGTEKCCDNCR 905
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+++ + + H MM ++EKYL CRR+ +L+HF+ + A V +KCCDNCR
Sbjct: 848 IHNEKFRLHKLKMMVKMEKYLHSSRCRRQIILSHFEDKRLQKASLAVMGTEKCCDNCR 905
>gi|109086093|ref|XP_001085031.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Macaca
mulatta]
Length = 1432
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 186/281 (66%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATAT + +DI L LR
Sbjct: 661 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATATSSIREDIVRCLNLR 720
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P II TGFDRPNLYL K +I+ DL+ K T+ +FEG TIIYCP++ + E+V
Sbjct: 721 NPQIICTGFDRPNLYLEVRRKTGNILQDLQPFLVKTTSSHWEFEGPTIIYCPSRKMTEQV 780
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S +RK++H FV+D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 781 TAELRKLNLSCETYHAGMSFSRRKDVHHKFVRDEIQCVIATIAFGMGINKADIRQVIHYG 840
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 841 APKEMESYYQEIGRAGRDGLQSSCHILWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKM 899
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVP-PDKCCDNCR 407
EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 900 EKYLHSSRCRRQIILSHFEDKQVQKASLGITGTEKCCDNCR 940
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVP-PDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 895 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGITGTEKCCDNCR 940
>gi|170763502|ref|NP_035851.3| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|170763504|ref|NP_001116294.1| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|342187359|sp|O09053.3|WRN_MOUSE RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN
gi|3885838|gb|AAC78077.1| Wrn protein [Mus musculus]
gi|29748014|gb|AAH50921.1| Wrn protein [Mus musculus]
gi|38173728|gb|AAH60700.1| Wrn protein [Mus musculus]
Length = 1401
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 191/282 (67%), Gaps = 8/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 686 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM +
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMMVK 863
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 864 MEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 848 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
>gi|2130973|dbj|BAA20269.1| WRN typeI [Mus musculus]
gi|2130975|dbj|BAA20270.1| WRN typeII [Mus musculus]
Length = 1401
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 191/282 (67%), Gaps = 8/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 686 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRQVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM +
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMMVK 863
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 864 MEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 848 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
>gi|340382611|ref|XP_003389812.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Amphimedon queenslandica]
Length = 1072
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/286 (50%), Positives = 183/286 (63%), Gaps = 15/286 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+AIDEAHCVSQWGHDFR SYR L +R +P+VP+LA+TATATP V DI +SL L
Sbjct: 309 ITLVAIDEAHCVSQWGHDFRDSYRRLGNIRQHIPNVPLLALTATATPAVRKDIISSLRLT 368
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL--------TNFE-NQFEGSTIIYCPTKV 242
+P ++ T FDRPNLY+ + K D + L TN + FEG TI+YC K
Sbjct: 369 NPLMVTTSFDRPNLYIEINPKSGLPSEDFKPLLLATKDPATNRTVHSFEGPTIVYCRKKA 428
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ E++ VL G+ YHA I LK+RKE+H F++D ++ VVAT AFGMGIDKPDVR
Sbjct: 429 VTEEITSVLKSMGVSCGTYHADIPLKERKEVHHKFLRDELQCVVATIAFGMGIDKPDVRL 488
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
+IHY AP+D+ YYQEIGRAGRDG S CY FY +DF N + F +++DS EH +
Sbjct: 489 IIHYSAPQDIECYYQEIGRAGRDGSPSKCYMFYSDSDFNLNRL-FLKDISDSLFLEHKQK 547
Query: 363 MMKRVEKYLELRTCRRKYLLNHF-KGSSVTVAESQVPPDKCCDNCR 407
M++++ L CRRK LL HF K S + + CCDNCR
Sbjct: 548 MLRKLMTLLSSSECRRKLLLEHFSKNLSTDIGGHK----DCCDNCR 589
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDN 61
+F +++DS EH + M++++ L CRRK LL HF S ++ CCDN
Sbjct: 531 LFLKDISDSLFLEHKQKMLRKLMTLLSSSECRRKLLLEHF---SKNLSTDIGGHKDCCDN 587
Query: 62 CRQVVYMTPEYVTN 75
CR+ + + TN
Sbjct: 588 CRRFLRGDIQIKTN 601
>gi|407261615|ref|XP_003946318.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Mus
musculus]
Length = 1434
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 191/282 (67%), Gaps = 8/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 693 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 752
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 753 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 812
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 813 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 872
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM +
Sbjct: 873 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMMVK 930
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 931 MEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 972
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 915 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 972
>gi|296221953|ref|XP_002756974.1| PREDICTED: Werner syndrome ATP-dependent helicase [Callithrix
jacchus]
Length = 1433
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 202/349 (57%), Gaps = 49/349 (14%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q+VY+TPEY + N S L ++ EA+
Sbjct: 636 QIVYITPEYCSGNLSLLQQL---------EANI--------------------------- 659
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+AVTATA+ + D
Sbjct: 660 -------GITLIAVDEAHCISEWGHDFRNSFRELGSLKTALPLVPIVAVTATASSSIRKD 712
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCP 239
I L L++P I TGFDRPNLYL K +I+ DL+ + TN +FEG TIIYCP
Sbjct: 713 IVCCLNLKNPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKTNTRWEFEGPTIIYCP 772
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ + E+V D L + + YHA +S +R + H F++D I+ V+AT AFGMGI+K D
Sbjct: 773 SRKMTEQVTDELRKLKLSCGTYHAGMSFSKRTDTHHRFMRDEIQCVIATIAFGMGINKAD 832
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
+R VIHYGAPK++ +YYQEIGRAGRDGL S C+ + AD N ++ ++D + +
Sbjct: 833 IRQVIHYGAPKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRLLL-TEIHDEMFRLY 891
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 892 KLKMMSKMEKYLHSSRCRRRIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 895 MMSKMEKYLHSSRCRRRIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
>gi|7595900|gb|AAF64490.1|AF241636_1 WRN protein [Mus musculus]
Length = 1401
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 191/282 (67%), Gaps = 8/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 686 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM +
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMMVK 863
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 864 MEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 848 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
>gi|170042986|ref|XP_001849186.1| werner syndrome helicase [Culex quinquefasciatus]
gi|167866388|gb|EDS29771.1| werner syndrome helicase [Culex quinquefasciatus]
Length = 1079
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 185/279 (66%), Gaps = 8/279 (2%)
Query: 129 IPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSL 188
+ ++VLIAIDEAHC+S+WGHDFRP+YR L +R P VPILAVTATATP V DI TSL
Sbjct: 134 LDQLVLIAIDEAHCLSKWGHDFRPAYRNLGVVRRICPRVPILAVTATATPNVRQDIVTSL 193
Query: 189 MLRDPNIINTGFDRPNLYLAASVKQD-DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
LR+P ++ TGFDRPNL +K D++ L EGS IIYC T+ +++
Sbjct: 194 GLREPQVLCTGFDRPNLQFHVRMKSSLGFWEDVKGL--LSRNTEGSIIIYCLTRKQTDEI 251
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
D L +Q YHA ++LKQRKE+H FV+D ++++VAT AFGMGIDKPDVR VIHYG
Sbjct: 252 VDTLRSCKVQCEAYHAGLTLKQRKEVHESFVRDRVQIIVATIAFGMGIDKPDVRLVIHYG 311
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
A KDL +YYQE GRAGRDG S F+ ADF K + + N + Q++ + + K++
Sbjct: 312 ASKDLESYYQEAGRAGRDGQPSKVVMFWNRADF-KTHEFLRENTPGGQ-QKNLEALSKKM 369
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+YL+ R CRR+++LN+F+G S SQ CCDNC
Sbjct: 370 HEYLDTRDCRRQFILNYFEGDSAKPTTSQ---KNCCDNC 405
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 13 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
Q++ + + K++ +YL+ R CRR+++LN+F+G S SQ CCDNC
Sbjct: 359 QKNLEALSKKMHEYLDTRDCRRQFILNYFEGDSAKPTTSQ---KNCCDNC 405
>gi|148703462|gb|EDL35409.1| Werner syndrome homolog (human) [Mus musculus]
Length = 1385
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 191/282 (67%), Gaps = 8/282 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 686 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM +
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMMVK 863
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
+EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 864 MEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 848 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
>gi|345306474|ref|XP_001508312.2| PREDICTED: Werner syndrome ATP-dependent helicase-like
[Ornithorhynchus anatinus]
Length = 1751
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 198/330 (60%), Gaps = 19/330 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
+ I I LIA+DEAHCVS+WGHDFR S+R L L+ LP VP++A+TATA+ + DDI
Sbjct: 875 IDSIVGITLIAVDEAHCVSEWGHDFRNSFRTLGSLKTTLPLVPVIALTATASSSIRDDIM 934
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTK 241
L L++P + TGFDRPNLYL K +++ DL+ K T +FEG TIIYCP++
Sbjct: 935 HCLKLKNPQVTCTGFDRPNLYLEVGRKTGNVLQDLKQFLVKKTGSVLEFEGPTIIYCPSR 994
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
I E+V L + I YHA + + R+E H F++D I+ +VAT AFGMGI+K D+R
Sbjct: 995 KITEQVAVELKKLNIVCGTYHAGMGINLRRETHHKFMRDEIQCIVATVAFGMGINKADIR 1054
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHYGAPK++ +YYQEIGRAGRDGL S C+T + D + N + ND+ + +
Sbjct: 1055 KVIHYGAPKEMESYYQEIGRAGRDGLPSSCHTLWAPGDMSLNRHLLNEIKNDT-FRLYKL 1113
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCRHNEMLELEQVPRG 420
MM ++EKYL CRRK +L+HF+ + A S + +KCCDNCR VP
Sbjct: 1114 KMMAKIEKYLHSSMCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCRSRSSYYTTDVPE- 1172
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHLK 450
T G +AF+F+ +K
Sbjct: 1173 ------------DTLQDFGPQAFQFISAVK 1190
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRRK +L+HF+ + A S + +KCCDNCR
Sbjct: 1115 MMAKIEKYLHSSMCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCR 1160
>gi|326918448|ref|XP_003205500.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Meleagris gallopavo]
Length = 1569
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 207/350 (59%), Gaps = 50/350 (14%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
+V+YMTPE+ + N L I R + IA
Sbjct: 687 RVIYMTPEFCSGNLELLQDIDRTIGIA--------------------------------- 713
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
LIAIDEAHC+S+WGHDFR S+R L+ L+ LP VPI+A+TATA+P + +D
Sbjct: 714 ----------LIAIDEAHCISEWGHDFRNSFRKLNSLKKALPSVPIVALTATASPSIRED 763
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL-----RKLTNFENQFEGSTIIYC 238
I L L++P I T FDRPNLYL + +I+ DL RK ++ +FEG TI+YC
Sbjct: 764 IVNCLNLKNPQITCTSFDRPNLYLEVGRQSGNILRDLKQFLSRKGSSSTYEFEGPTIVYC 823
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
P++ E+V L++ G+ YHA + +++R++ H F++D I+ VVAT AFGMGI+K
Sbjct: 824 PSRKATEQVLFELNKLGVTCGAYHAGMGIQKRRDTHHQFMRDEIQCVVATVAFGMGINKA 883
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
D+R VIHYGAPK++ +YYQEIGRAGRDGL + C+ + AD N + +++ + +
Sbjct: 884 DIRMVIHYGAPKEMESYYQEIGRAGRDGLPASCHVLWTAADLVLNRRLLN-EIHNEKFRS 942
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSV-TVAESQVPPDKCCDNCR 407
+ M++++EKYL +CRRK +L+HF+ + V+ + ++CCDNCR
Sbjct: 943 YKLKMLEKMEKYLSSNSCRRKIILSHFEDKQLRKVSSGIMGTEECCDNCR 992
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+++ + + + M++++EKYL +CRRK +L+HF+ + S + ++CCDNCR
Sbjct: 935 IHNEKFRSYKLKMLEKMEKYLSSNSCRRKIILSHFEDKQLRKVSSGIMGTEECCDNCR 992
>gi|354474937|ref|XP_003499686.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Cricetulus griseus]
gi|344242328|gb|EGV98431.1| Werner syndrome ATP-dependent helicase-like [Cricetulus griseus]
Length = 1405
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 189/281 (67%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L++ LP VP++A++ATA+ ++ +DI L L+
Sbjct: 633 ITLIAVDEAHCISEWGHDFRSSFRTLGSLKIALPLVPVIALSATASSLIREDIIRCLNLK 692
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P I TGFDRPNLYL K +I+ DL+ ++ +FEG TIIYCP++ + E+V
Sbjct: 693 NPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVQKSSTAWEFEGPTIIYCPSRKMTEQV 752
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA +++ +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 753 TAELGKLNLACRAYHAGMNINKRKDVHHWFLRDEIQCVVATIAFGMGINKADIRKVIHYG 812
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + ADF F +++ + + H MM ++
Sbjct: 813 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNLTRHHFL-EIHNEKFRLHKLKMMAKM 871
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 872 EKYLHSSQCRRQIILSHFEDKRLQKASLDIMGTEKCCDNCR 912
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 15 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
H MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 863 HKLKMMAKMEKYLHSSQCRRQIILSHFEDKRLQKASLDIMGTEKCCDNCR 912
>gi|403294330|ref|XP_003938145.1| PREDICTED: Werner syndrome ATP-dependent helicase [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 183/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+AVTATA+ + DI + L L+
Sbjct: 660 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPLVPIVAVTATASSSIQQDIVSCLNLK 719
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P I TGFDRPNLYL K +I+ DL+ + TN +FEG TIIYCP++ + E+V
Sbjct: 720 NPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKTNTRWEFEGPTIIYCPSRKMTEQV 779
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S +RK+ H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 780 TAELRKLQLSCETYHAGMSFNKRKDTHHRFLRDEIQCVIATIAFGMGINKADIRQVIHYG 839
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + D + + MM ++
Sbjct: 840 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRCLL-AEIRDETFRLYKLKMMSKM 898
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVP-PDKCCDNCR 407
EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 899 EKYLHSSRCRRRIILSHFEDKQVQKASLGITGTEKCCDNCR 939
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVP-PDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 894 MMSKMEKYLHSSRCRRRIILSHFEDKQVQKASLGITGTEKCCDNCR 939
>gi|340382607|ref|XP_003389810.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog, partial
[Amphimedon queenslandica]
Length = 864
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/286 (49%), Positives = 182/286 (63%), Gaps = 15/286 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+AIDEAHCVSQWGHDFR SYR L +R +P+VP+LA+TATATP V DI +SL L
Sbjct: 98 ITLVAIDEAHCVSQWGHDFRDSYRRLGNIRHHIPNVPLLALTATATPAVRKDIISSLRLT 157
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL--------TNFE-NQFEGSTIIYCPTKV 242
+P ++ T FDRPNLY+ + K D + L TN + FEG TI+YC K
Sbjct: 158 NPLMVTTSFDRPNLYIEINPKSGLPSEDFKPLLLATKDPATNRTVHSFEGPTIVYCRKKA 217
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ E++ VL G+ YHA I LK+RKE+H F++D ++ VVAT AFGMGIDKPDVR
Sbjct: 218 VTEEITSVLKSMGVSCGTYHADIPLKERKEVHHKFLRDELQCVVATIAFGMGIDKPDVRL 277
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
++HY AP+D+ YYQEIGRAGRDG S CY FY +DF N F +++DS EH +
Sbjct: 278 IVHYSAPQDIECYYQEIGRAGRDGSPSKCYMFYSDSDFNLNRF-FLKDISDSLFLEHKQK 336
Query: 363 MMKRVEKYLELRTCRRKYLLNHF-KGSSVTVAESQVPPDKCCDNCR 407
M++++ L CRRK LL HF K S + + CCDNCR
Sbjct: 337 MLRKLMTLLSSSECRRKLLLEHFSKNLSTDIGGHK----DCCDNCR 378
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 2 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDN 61
F +++DS EH + M++++ L CRRK LL HF S ++ CCDN
Sbjct: 320 FFLKDISDSLFLEHKQKMLRKLMTLLSSSECRRKLLLEHF---SKNLSTDIGGHKDCCDN 376
Query: 62 CRQVVYMTPEYVTN 75
CR+ + + TN
Sbjct: 377 CRRFLRGDIQIKTN 390
>gi|3851581|gb|AAC72359.1| Wrn protein [Mus musculus]
Length = 988
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 192/283 (67%), Gaps = 10/283 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 686 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF--TKNNMIFQPNLNDSEIQEHSKTMMK 365
APK++ +YYQEIGRAGRDGL S C+ + ADF ++N++I ++D + + + MM
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNHLI---EIHDEKFRLYKLKMMV 862
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 863 KMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 848 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905
>gi|332240842|ref|XP_003269596.1| PREDICTED: Werner syndrome ATP-dependent helicase [Nomascus
leucogenys]
Length = 1433
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 185/280 (66%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 663 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPKVPIVALTATASSSIREDIVCCLNLR 722
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +F+G TIIYCP++ + ++V
Sbjct: 723 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFKGPTIIYCPSRKMTQQVT 782
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D L + + YHA +S + RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 783 DELRKLNLSCGTYHAGMSFRTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 842
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 843 PKEMESYYQEIGRAGRDGLQSSCHVLWAPADINVNRHLL-TEIRNEKFRLYKLKMMAKME 901
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 902 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 941
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 896 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 941
>gi|119583828|gb|EAW63424.1| Werner syndrome, isoform CRA_a [Homo sapiens]
Length = 1405
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 635 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 694
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 695 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 754
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 755 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 814
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 815 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 873
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 874 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 913
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 868 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 913
>gi|119583830|gb|EAW63426.1| Werner syndrome, isoform CRA_c [Homo sapiens]
Length = 1406
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 636 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 695
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 696 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 755
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 756 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 815
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 816 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 874
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 875 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 914
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 869 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 914
>gi|62088884|dbj|BAD92889.1| Werner syndrome protein variant [Homo sapiens]
Length = 842
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 72 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 131
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 132 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 191
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 192 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 251
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 252 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 310
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 311 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 350
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 305 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 350
>gi|110735439|ref|NP_000544.2| Werner syndrome ATP-dependent helicase [Homo sapiens]
gi|322510082|sp|Q14191.2|WRN_HUMAN RecName: Full=Werner syndrome ATP-dependent helicase; AltName:
Full=DNA helicase, RecQ-like type 3; Short=RecQ3;
AltName: Full=Exonuclease WRN; AltName: Full=RecQ
protein-like 2
gi|37953299|gb|AAR05448.1| Werner syndrome [Homo sapiens]
Length = 1432
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 662 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 721
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 722 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 781
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 782 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 841
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 842 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 900
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 901 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 895 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
>gi|229442299|gb|AAI72840.1| Werner syndrome protein [synthetic construct]
Length = 863
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 93 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 152
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 153 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 212
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 213 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 272
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 273 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 331
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 332 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 371
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 326 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 371
>gi|306921707|dbj|BAJ17933.1| Werner syndrome, RecQ helicase-like [synthetic construct]
Length = 1432
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 662 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 721
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 722 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 781
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 782 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 841
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 842 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 900
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 901 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 895 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
>gi|426359284|ref|XP_004046910.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Gorilla gorilla gorilla]
Length = 1429
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 659 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 718
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 719 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 778
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 779 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 838
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 839 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 897
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 898 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 937
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 892 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 937
>gi|1280208|gb|AAC41981.1| unnamed protein product [Homo sapiens]
gi|3719421|gb|AAC63361.1| WRN [Homo sapiens]
gi|6272686|gb|AAF06162.1| WRN [Homo sapiens]
gi|60461921|gb|AAX21098.1| Werner syndrome helicase [Homo sapiens]
Length = 1432
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 662 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 721
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 722 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 781
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 782 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 841
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 842 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 900
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 901 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 895 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
>gi|119583829|gb|EAW63425.1| Werner syndrome, isoform CRA_b [Homo sapiens]
Length = 1436
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 666 ITLIAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 725
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 726 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 785
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 786 GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 845
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 846 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 904
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 905 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 944
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 899 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 944
>gi|350593451|ref|XP_003133429.3| PREDICTED: Werner syndrome ATP-dependent helicase [Sus scrofa]
Length = 1443
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 184/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I +IA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TAT T + +DI L L+
Sbjct: 665 ITVIAVDEAHCISEWGHDFRNSFRTLGSLKSALPLVPIVALTATGTSSIREDIVRCLKLK 724
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K DI+ DL++ T+ +FEG TIIYCP++ + E+V
Sbjct: 725 DPQITCTGFDRPNLYLEVGRKTGDILQDLKQFLVQKTSSAWEFEGPTIIYCPSRKMTEQV 784
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S+ RK++H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 785 TAELKKLKLACETYHAGLSIHLRKQVHHKFMRDEIQCVIATIAFGMGINKADIRKVIHYG 844
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + N++ + + MM ++
Sbjct: 845 APKEIESYYQEIGRAGRDGLQSSCHILWAPADINLNRHLLSEICNEN-FRLYKLKMMAKM 903
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 904 EKYLHSSRCRRQIILSHFEDKQLRKASLGIMGTEKCCDNCR 944
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 899 MMAKMEKYLHSSRCRRQIILSHFEDKQLRKASLGIMGTEKCCDNCR 944
>gi|197927293|ref|NP_001128149.1| Werner syndrome ATP-dependent helicase [Pongo abelii]
gi|55726573|emb|CAH90053.1| hypothetical protein [Pongo abelii]
Length = 1486
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 716 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATASSSIQEDIVRCLNLR 775
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + E+V
Sbjct: 776 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTEQVT 835
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 836 AELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 895
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++E
Sbjct: 896 PKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKME 954
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 955 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 994
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 949 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 994
>gi|355697852|gb|EHH28400.1| Werner syndrome ATP-dependent helicase [Macaca mulatta]
Length = 1431
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 182/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATAT + +DI L LR
Sbjct: 661 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATATSSIREDIVRCLNLR 720
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P II TGFDRPNLYL K +I+ DL+ T +FEG TIIYCP++ + E+V
Sbjct: 721 NPQIICTGFDRPNLYLEVRRKTGNILQDLQPFLVKTTSHWEFEGPTIIYCPSRKMTEQVT 780
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S +RK++H FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 781 AELRKLNLSCETYHAGMSFSRRKDVHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 840
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK++ +YYQEIGRAGRDGL S C+ + AD N + + + + MM ++E
Sbjct: 841 PKEMESYYQEIGRAGRDGLQSSCHILWAPADINLNXXXXXXXXXE-KFRLYKLKMMAKME 899
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVP-PDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 900 KYLHSSRCRRQIILSHFEDKQVQKASLGITGTEKCCDNCR 939
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVP-PDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 894 MMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGITGTEKCCDNCR 939
>gi|431902275|gb|ELK08776.1| Werner syndrome ATP-dependent helicase [Pteropus alecto]
Length = 1338
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 185/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ P VPI+A+TATA+ V +DI L L+
Sbjct: 534 IALIAVDEAHCISEWGHDFRNSFRALGSLKAAFPLVPIVALTATASSSVREDIVRCLNLK 593
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ +L++ T+ +FEG TIIYCP++ + E+V
Sbjct: 594 DPQITCTGFDRPNLYLEVGRKTGNILQNLKQFLVRKTSSAWEFEGPTIIYCPSRKMTERV 653
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
D L + + YHA +++ RK +H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 654 TDELRKLKLTCGTYHAGMTINSRKAVHHRFMRDEIQCVVATIAFGMGINKADIRKVIHYG 713
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + M+ ++
Sbjct: 714 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRYRL-SEIQNEKFRLYKLKMLAKM 772
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL +CRR+ +L+HF+ + A S + +KCCDNC+
Sbjct: 773 EKYLHSSSCRRRIILSHFEDKQLRKASSGIMGTEKCCDNCK 813
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M+ ++EKYL +CRR+ +L+HF+ + A S + +KCCDNC+
Sbjct: 768 MLAKMEKYLHSSSCRRRIILSHFEDKQLRKASSGIMGTEKCCDNCK 813
>gi|290490726|dbj|BAI79323.1| WRN helicase [Gallus gallus]
Length = 1498
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 210/365 (57%), Gaps = 50/365 (13%)
Query: 49 AESQVPPDKCCDNCRQVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSY 108
A+S+ D +V+YMTPE+ + N L I R IA
Sbjct: 601 AQSKDVKDNIKAGLYRVIYMTPEFCSGNLELLQDIDRTTGIA------------------ 642
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
LIA+DEAHC+S+WGHDFR S+R L+ L+ LP VP
Sbjct: 643 -------------------------LIAVDEAHCISEWGHDFRISFRKLNSLKKALPSVP 677
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL-----RKL 223
I+A+TATA+P + +DI L L++P + T FDRPNLYL + + + DL RK
Sbjct: 678 IVALTATASPSIREDIVNCLNLKNPQVTCTSFDRPNLYLEVGRQSGNTLRDLKQFLTRKG 737
Query: 224 TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIK 283
++ +FEG TIIYCP++ E+V L++ G+ YHA + +++R++ H F++D I+
Sbjct: 738 SSSTYEFEGPTIIYCPSRKATEQVMFELNKLGVTCGAYHAGMGIQKRRDTHHQFMRDEIQ 797
Query: 284 VVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKN 343
VVAT AFGMGI+K D+R VIHYGAPK++ +YYQEIGRAGRDGL + C+ + AD N
Sbjct: 798 CVVATVAFGMGINKADIRMVIHYGAPKEMESYYQEIGRAGRDGLPASCHVLWTAADLVLN 857
Query: 344 NMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSV-TVAESQVPPDKC 402
+ +++ + + + M++++EKYL +CRRK +L+HF+ + V+ + ++C
Sbjct: 858 RRLLN-EIHNEKFRLYKLKMLEKMEKYLSSNSCRRKIILSHFEDKQLRKVSSGIMGTEEC 916
Query: 403 CDNCR 407
CDNCR
Sbjct: 917 CDNCR 921
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M++++EKYL +CRRK +L+HF+ + S + ++CCDNCR
Sbjct: 876 MLEKMEKYLSSNSCRRKIILSHFEDKQLRKVSSGIMGTEECCDNCR 921
>gi|363733349|ref|XP_001235033.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Gallus gallus]
Length = 1498
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 210/365 (57%), Gaps = 50/365 (13%)
Query: 49 AESQVPPDKCCDNCRQVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSY 108
A+S+ D +V+YMTPE+ + N L I R IA
Sbjct: 601 AQSKDVKDNIKAGLYRVIYMTPEFCSGNLELLQDIDRTTGIA------------------ 642
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
LIA+DEAHC+S+WGHDFR S+R L+ L+ LP VP
Sbjct: 643 -------------------------LIAVDEAHCISEWGHDFRISFRKLNSLKKALPSVP 677
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL-----RKL 223
I+A+TATA+P + +DI L L++P + T FDRPNLYL + + + DL RK
Sbjct: 678 IVALTATASPSIREDIVNCLNLKNPQVTCTSFDRPNLYLEVGRQSGNTLRDLKQFLTRKG 737
Query: 224 TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIK 283
++ +FEG TIIYCP++ E+V L++ G+ YHA + +++R++ H F++D I+
Sbjct: 738 SSSTYEFEGPTIIYCPSRKATEQVMFELNKLGVTCGAYHAGMGIQKRRDTHHQFMRDEIQ 797
Query: 284 VVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKN 343
VVAT AFGMGI+K D+R VIHYGAPK++ +YYQEIGRAGRDGL + C+ + AD N
Sbjct: 798 CVVATVAFGMGINKADIRMVIHYGAPKEMESYYQEIGRAGRDGLPASCHVLWTAADLVLN 857
Query: 344 NMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSV-TVAESQVPPDKC 402
+ +++ + + + M++++EKYL +CRRK +L+HF+ + V+ + ++C
Sbjct: 858 RRLLN-EIHNEKFRLYKLKMLEKMEKYLSSNSCRRKIILSHFEDKQLRKVSSGIMGTEEC 916
Query: 403 CDNCR 407
CDNCR
Sbjct: 917 CDNCR 921
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M++++EKYL +CRRK +L+HF+ + S + ++CCDNCR
Sbjct: 876 MLEKMEKYLSSNSCRRKIILSHFEDKQLRKVSSGIMGTEECCDNCR 921
>gi|397521446|ref|XP_003830806.1| PREDICTED: Werner syndrome ATP-dependent helicase [Pan paniscus]
Length = 1405
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 182/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 635 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 694
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 695 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 754
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 755 GELRKLNLSCGTYHAGMSFNTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 814
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + M ++E
Sbjct: 815 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMTAKME 873
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 874 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 913
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 868 MTAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 913
>gi|312384688|gb|EFR29358.1| hypothetical protein AND_01775 [Anopheles darlingi]
Length = 936
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 184/286 (64%), Gaps = 12/286 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ LIAIDEAHC+S+WGHDFRP+YR L +R PDVPILAVTATATP V DDI SL L
Sbjct: 91 QLALIAIDEAHCLSKWGHDFRPAYRNLGIVRTLCPDVPILAVTATATPKVRDDIVQSLHL 150
Query: 191 RDPNIINTGFDRPNL-YLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ I+ TGFDRPNL ++ + D++ L + EGS IIYC T+ E++ +
Sbjct: 151 NNAQILCTGFDRPNLEFIVRPKGSQGPLGDIQPLLGSGTR-EGSIIIYCLTRKQTEEIVE 209
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L GI+ YHA +S+ +R+++H FV+D ++++VAT AFGMGIDKPDVR VIHYGA
Sbjct: 210 LLRSKGIECEAYHAGLSVTKRRQVHEHFVRDRLQIIVATIAFGMGIDKPDVRLVIHYGAS 269
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
KDL +YYQE GRAGRDG S C F+ ADF K + + +Q + + + +++ +
Sbjct: 270 KDLESYYQEAGRAGRDGQPSRCVMFWSRADF-KTHEFLRSQAGSGSVQHNLEQLSRKMSE 328
Query: 370 YLELRTCRRKYLLNHFKGS---------SVTVAESQVPPDKCCDNC 406
YL+ R CRR+++L +F+G+ S P +CCDNC
Sbjct: 329 YLDTRDCRRRFILQYFEGTLSQIGNREKSAAQTAGDGKPRRCCDNC 374
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 8 NDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGS---------SVTMAESQVPPDKC 58
+Q + + + +++ +YL+ R CRR+++L +F+G+ S P +C
Sbjct: 311 GSGSVQHNLEQLSRKMSEYLDTRDCRRRFILQYFEGTLSQIGNREKSAAQTAGDGKPRRC 370
Query: 59 CDNC 62
CDNC
Sbjct: 371 CDNC 374
>gi|426256366|ref|XP_004021811.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Ovis aries]
Length = 1446
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 182/281 (64%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+AVTATA V +DI L L+
Sbjct: 669 ITLIAVDEAHCISEWGHDFRSSFRALCSLKAVLPQVPIVAVTATAGSSVREDIVRCLKLK 728
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K I+ DL++ ++ +FEG TIIYCP++ + E+V
Sbjct: 729 DPQITCTGFDRPNLYLEVGRKTGSILEDLKQFLVCKSSSAWEFEGPTIIYCPSRKMTEQV 788
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S+ RK++H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 789 TAELKKLNLACGTYHAGLSINLRKQVHHRFMRDEIQCVIATVAFGMGINKADIRQVIHYG 848
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + E Q + M+ ++
Sbjct: 849 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADMNLNRHLL-GEIRNKEFQLYKLKMLAKM 907
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + + CCDNC+
Sbjct: 908 EKYLYSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCK 948
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+ + E Q + M+ ++EKYL CRR+ +L+HF+ + A + + CCDNC+
Sbjct: 891 IRNKEFQLYKLKMLAKMEKYLYSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCK 948
>gi|114619614|ref|XP_528104.2| PREDICTED: Werner syndrome ATP-dependent helicase [Pan troglodytes]
Length = 1432
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 182/280 (65%), Gaps = 5/280 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L LR
Sbjct: 662 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLR 721
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+P I TGFDRPNLYL K +I+ DL+ T+ +FEG TIIYCP++ + ++V
Sbjct: 722 NPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVT 781
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + YHA +S RK+IH FV+D I+ V+AT AFGMGI+K D+R VIHYGA
Sbjct: 782 GELRKLNLSCGTYHAGMSFNTRKDIHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYGA 841
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PKD+ +YYQEIGRAGRDGL S C+ + AD N + + + + + + M ++E
Sbjct: 842 PKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL-TEIRNEKFRLYKLKMTAKME 900
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
KYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 901 KYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M ++EKYL CRR+ +L+HF+ V A + +KCCDNCR
Sbjct: 895 MTAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940
>gi|301789889|ref|XP_002930354.1| PREDICTED: Werner syndrome ATP-dependent helicase-like, partial
[Ailuropoda melanoleuca]
Length = 1120
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 184/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI SL L+
Sbjct: 342 ITLIAVDEAHCISEWGHDFRSSFRNLGSLKAILPSVPIVALTATASSSIREDIVRSLNLK 401
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL K +I DL + T+ +FEG TIIYCP++ + E+V
Sbjct: 402 NPQITCTSFDRPNLYLEVGRKTGNIHQDLVQFLVQKTSSSWEFEGPTIIYCPSRKMTEQV 461
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + +K R+E+H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 462 TAELQKLKLACGTYHAGLGVKSRREVHHSFMRDEIQCVVATIAFGMGINKADIRKVIHYG 521
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 522 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLS-EIPNEKFRLYKLKMMAKM 580
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
E+YL R CRRK +L+HF+ + A + +KCCDNCR
Sbjct: 581 EEYLHSRRCRRKLILSHFEDKQLRKASVGIMGTEKCCDNCR 621
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++E+YL R CRRK +L+HF+ + A + +KCCDNCR
Sbjct: 576 MMAKMEEYLHSRRCRRKLILSHFEDKQLRKASVGIMGTEKCCDNCR 621
>gi|334330890|ref|XP_001372295.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Monodelphis domestica]
Length = 1391
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 184/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+A+DEAHCVS+WGHDFR ++R L L+ LP VP+LA+TATA+ + DI L LR
Sbjct: 696 ITLVAVDEAHCVSEWGHDFRNAFRNLGLLKTTLPSVPMLALTATASSSIRADIAHCLYLR 755
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN----QFEGSTIIYCPTKVICEKV 247
DP + T FDRPNLYL K I+ DL K + +FEG TIIYCP++ I E+V
Sbjct: 756 DPQVTCTSFDRPNLYLDVGPKTGSILRDLDKFLVKKPGSCWEFEGPTIIYCPSRKISEQV 815
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + +K R+EIH F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 816 TVELRKLDLACGTYHAGMGIKSRREIHHKFMRDEIQCVIATVAFGMGINKADIRKVIHYG 875
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N ++ ND+ +++ MM+++
Sbjct: 876 APKEMESYYQEIGRAGRDGLPSACHVLWTPADINFNRLLLSDIQNDN-FRQYKLKMMRQL 934
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL+ CRRK +L+HF+ + A + ++CCDNCR
Sbjct: 935 EKYLQSSNCRRKIILSHFEDKQLRKASLGIMGTEQCCDNCR 975
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 6 NLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++ + +++ MM+++EKYL+ CRRK +L+HF+ + A + ++CCDNCR
Sbjct: 917 DIQNDNFRQYKLKMMRQLEKYLQSSNCRRKIILSHFEDKQLRKASLGIMGTEQCCDNCR 975
>gi|281348780|gb|EFB24364.1| hypothetical protein PANDA_020784 [Ailuropoda melanoleuca]
Length = 1113
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 184/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI SL L+
Sbjct: 374 ITLIAVDEAHCISEWGHDFRSSFRNLGSLKAILPSVPIVALTATASSSIREDIVRSLNLK 433
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL K +I DL + T+ +FEG TIIYCP++ + E+V
Sbjct: 434 NPQITCTSFDRPNLYLEVGRKTGNIHQDLVQFLVQKTSSSWEFEGPTIIYCPSRKMTEQV 493
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + +K R+E+H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 494 TAELQKLKLACGTYHAGLGVKSRREVHHSFMRDEIQCVVATIAFGMGINKADIRKVIHYG 553
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 554 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLS-EIPNEKFRLYKLKMMAKM 612
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
E+YL R CRRK +L+HF+ + A + +KCCDNCR
Sbjct: 613 EEYLHSRRCRRKLILSHFEDKQLRKASVGIMGTEKCCDNCR 653
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++E+YL R CRRK +L+HF+ + A + +KCCDNCR
Sbjct: 608 MMAKMEEYLHSRRCRRKLILSHFEDKQLRKASVGIMGTEKCCDNCR 653
>gi|348578015|ref|XP_003474779.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Cavia
porcellus]
Length = 1486
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 186/281 (66%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L L
Sbjct: 637 IALIAVDEAHCISEWGHDFRSSFRTLGSLKTALPLVPIVALTATASSSIQEDIIRCLKLN 696
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL K +I+ DL+ K TN E +FEG TIIYCP++ + E+V
Sbjct: 697 NPQITCTSFDRPNLYLEVGRKTGNILQDLQPFLVKRTNSEWEFEGPTIIYCPSRKMTEQV 756
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S RK++H F++D I+ ++AT AFGMGI+KPD+R +IHYG
Sbjct: 757 TAELRKLNLACETYHAGMSSGTRKDVHHRFMRDEIQCIIATIAFGMGINKPDIRKIIHYG 816
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQE+GRAGRDGL S C+ + AD N F +++ + + + M+ ++
Sbjct: 817 APKEMESYYQEVGRAGRDGLPSSCHVLWAPADINLNRYRF-FEIHNEKFRLYKLKMVAKM 875
Query: 368 EKYLELRTCRRKYLLNHFKGSSV-TVAESQVPPDKCCDNCR 407
EKYL CRR+ +L+HF+ + V+ + +KCCDNCR
Sbjct: 876 EKYLHSNRCRRQIILSHFEDKKLQKVSLDIMGTEKCCDNCR 916
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M+ ++EKYL CRR+ +L+HF+ + + +KCCDNCR
Sbjct: 871 MVAKMEKYLHSNRCRRQIILSHFEDKKLQKVSLDIMGTEKCCDNCR 916
>gi|395541837|ref|XP_003772843.1| PREDICTED: Werner syndrome ATP-dependent helicase [Sarcophilus
harrisii]
Length = 1448
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 184/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHCVS+WGHDFR S+R L L+ LP VP+LA+TATA+ + DI L LR
Sbjct: 682 ITLIAVDEAHCVSEWGHDFRNSFRNLGSLKTTLPLVPVLALTATASSSIRTDIMHCLNLR 741
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P + T FDRPNLYL K +I+ DL + T +FEG TIIYCP++ I E+V
Sbjct: 742 NPQVTCTSFDRPNLYLEVGRKTGNILQDLDRFLVKKTGSSWEFEGPTIIYCPSRKISEQV 801
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + +K R+EIH F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 802 TAELQKLNLACGTYHAGLGIKLRREIHHKFMRDEIQCVIATVAFGMGINKADIRKVIHYG 861
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQE+GRAGRDGL S C+ + AD N + + + + +++ MM+++
Sbjct: 862 APKEMESYYQEMGRAGRDGLPSACHVLWAPADINFNRHLIG-EIQNVDFRQYKLKMMRKL 920
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL+ CRRK +L+HF+ + A + ++CCDNC+
Sbjct: 921 EKYLQSSRCRRKIILSHFEDRQLRKASLGIMGTEQCCDNCQ 961
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+ + + +++ MM+++EKYL+ CRRK +L+HF+ + A + ++CCDNC+
Sbjct: 904 IQNVDFRQYKLKMMRKLEKYLQSSRCRRKIILSHFEDRQLRKASLGIMGTEQCCDNCQ 961
>gi|291386094|ref|XP_002709593.1| PREDICTED: Werner syndrome protein [Oryctolagus cuniculus]
Length = 1416
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 183/281 (65%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ V +DI L L
Sbjct: 636 ITLIAVDEAHCISEWGHDFRSSFRSLGSLKTALPLVPIVALTATASSSVREDIVRCLKLS 695
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL K +I+ DL+ K T+ + +FEG TIIYCP++ + E+V
Sbjct: 696 NPQITCTSFDRPNLYLEVGPKTGNILQDLKQFLVKKTSSDWEFEGPTIIYCPSRKMTEQV 755
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S +RKE+H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 756 TAELRKLNVACGTYHAGMSCSRRKEVHHSFMRDDIQCVIATIAFGMGINKADIRKVIHYG 815
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQEIGRAGRDGL S C+ + AD N + + D + + + M+ ++
Sbjct: 816 TPKEMESYYQEIGRAGRDGLQSSCHLLWAAADSNLNRHLLM-EIRDEKFRLYKLQMLTKM 874
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 875 EKYLHSSRCRRQIILSHFEDKQLRKASLGIMGTEKCCDNCR 915
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+ D + + + M+ ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 858 IRDEKFRLYKLQMLTKMEKYLHSSRCRRQIILSHFEDKQLRKASLGIMGTEKCCDNCR 915
>gi|449499575|ref|XP_002193489.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Taeniopygia guttata]
Length = 1497
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 188/290 (64%), Gaps = 7/290 (2%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L++ I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+P + +DI
Sbjct: 697 LNQTVGITLIAVDEAHCISEWGHDFRSSFRNLGILKKALPLVPIIALTATASPSIREDIV 756
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL-----RKLTNFENQFEGSTIIYCPT 240
L LR+P + T FDRPNLYL + DI DL RK ++ +FEG TIIYCPT
Sbjct: 757 KCLDLRNPQVTCTSFDRPNLYLEVGQQSGDICRDLKQFLIRKGSSSVYEFEGPTIIYCPT 816
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E+V L++ + YHA + KQR++ H F++D I+ VVAT AFGMGI+K D+
Sbjct: 817 RKATEQVVCALNKLNVACGTYHAGMESKQRRDTHHQFMRDEIQCVVATVAFGMGINKADI 876
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIHYGAPK++ +YYQE+GRAGRDGL + C+ + D N + N++ + +
Sbjct: 877 RLVIHYGAPKEMESYYQEMGRAGRDGLPAACHVLWAATDLVSNRRLLGEIRNEA-FRLYK 935
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSV-TVAESQVPPDKCCDNCRHN 409
M++++EKYL CRRK +L+HF+ + V+ + ++CCDNCR +
Sbjct: 936 LKMLEKMEKYLVSNGCRRKIILSHFEDRQLRKVSSGIMGTEECCDNCRSS 985
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M++++EKYL CRRK +L+HF+ + S + ++CCDNCR
Sbjct: 938 MLEKMEKYLVSNGCRRKIILSHFEDRQLRKVSSGIMGTEECCDNCR 983
>gi|196003676|ref|XP_002111705.1| hypothetical protein TRIADDRAFT_56013 [Trichoplax adhaerens]
gi|190585604|gb|EDV25672.1| hypothetical protein TRIADDRAFT_56013 [Trichoplax adhaerens]
Length = 1020
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 185/302 (61%), Gaps = 32/302 (10%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+AIDEAHCVSQWGHDFR SYR L +R LP VPI+A+TATATP+V DICT+L L
Sbjct: 297 ISLVAIDEAHCVSQWGHDFRSSYRQLDFIRNLLPHVPIMALTATATPLVRADICTALKLS 356
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADL------RKLTNFENQFEGSTIIYCPTKVICE 245
DP I +T FDRPNLY +K D+M DL R+ +FEGSTIIYC ++ E
Sbjct: 357 DPLISSTSFDRPNLYFEVRIK-SDLMKDLKPYMRKREEKKLFYEFEGSTIIYCISRKDSE 415
Query: 246 KVCDVLSRN-------------------GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVV 286
V L + GI+ YHA + L+ R+ IH F++D ++ VV
Sbjct: 416 MVASKLQGSNILKQRSLINVRMTDLVTFGIKCGYYHAGMGLQDRQRIHHEFIRDELQCVV 475
Query: 287 ATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMI 346
AT AFGMGIDKPDVR +IHYGAP+D+ +YYQE+GRAGRDGL VC F+ ADF +
Sbjct: 476 ATIAFGMGIDKPDVRRIIHYGAPRDIESYYQEVGRAGRDGLPGVCVVFFAEADFRLHKH- 534
Query: 347 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDK-CCDN 405
F + D + ++H MM ++ YL + CRR+ +++HF+ ++ P CCDN
Sbjct: 535 FIGEIADEDFRKHKLEMMNKLLTYLITKDCRRREIISHFESKNI----DDFPKHADCCDN 590
Query: 406 CR 407
CR
Sbjct: 591 CR 592
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDK-CCDN 61
F + D + ++H MM ++ YL + CRR+ +++HF+ ++ P CCDN
Sbjct: 535 FIGEIADEDFRKHKLEMMNKLLTYLITKDCRRREIISHFESKNI----DDFPKHADCCDN 590
Query: 62 CRQ 64
CR+
Sbjct: 591 CRR 593
>gi|410956163|ref|XP_003984713.1| PREDICTED: Werner syndrome ATP-dependent helicase, partial [Felis
catus]
Length = 1190
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 206/354 (58%), Gaps = 59/354 (16%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q+VY+TPE+ + N S L ++ EA+
Sbjct: 387 QIVYVTPEFCSGNLSLLQQL---------EANI--------------------------- 410
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+AVTATA+ + +D
Sbjct: 411 -------GITLIAVDEAHCISEWGHDFRNSFRTLGSLKKALPTVPIVAVTATASSSIRED 463
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCP 239
I L L++P I TGFDRPNLYL K +I+ DL++ T+ +FEG TIIYCP
Sbjct: 464 IIHCLKLKNPQITCTGFDRPNLYLEVGRKSGNILQDLKQFLVQKTSSTWEFEGPTIIYCP 523
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ + E+V L + + YHA + + R+E+H F++D I+ VVAT AFGMGI+K D
Sbjct: 524 SRKMTEEVTAELRKVKLACGTYHAGMCVTARREVHHRFMRDEIQCVVATIAFGMGINKAD 583
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKN-NMIFQPNLNDSEIQE 358
+R VIHYGAPK++ +YYQEIGRAGRDGL S C+ + D N N++ Q + + +
Sbjct: 584 IRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHVLWAPVDIQSNRNLLSQ--IPSEKFRL 641
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHF-----KGSSVTVAESQVPPDKCCDNCR 407
+ M+ ++E YL R CRR+ +L+HF + +SV + E++ KCCDNCR
Sbjct: 642 YKLNMVAKMENYLLSRRCRRQIILSHFEDKQLRKASVGIMETE----KCCDNCR 691
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M+ ++E YL R CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 646 MVAKMENYLLSRRCRRQIILSHFEDKQLRKASVGIMETEKCCDNCR 691
>gi|351715433|gb|EHB18352.1| Werner syndrome ATP-dependent helicase [Heterocephalus glaber]
Length = 1411
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 182/281 (64%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L L
Sbjct: 642 ITLIAVDEAHCISEWGHDFRSSFRTLGSLKTALPLVPIVALTATASSSIQEDIIHCLKLS 701
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P I T FDRPNLYL K +I+ DL+ K T+ E +FEG TIIYC ++ + EKV
Sbjct: 702 NPQITCTSFDRPNLYLEVGRKTGNILQDLQPFLVKKTSSEWEFEGPTIIYCSSRKMTEKV 761
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S RK++H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 762 TAELRKLNLACGTYHAGMSFNTRKDVHHRFMRDEIQCVIATIAFGMGINKSDIRKVIHYG 821
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + ADF N F +++ + + + M+ ++
Sbjct: 822 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADFNLNRHHF-IEIHNEKFRSYKLKMVAKM 880
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L HF+ + A + + CCDNCR
Sbjct: 881 EKYLHSSRCRRQIILCHFEDRQLQKASLDIMGTENCCDNCR 921
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
+++ + + + M+ ++EKYL CRR+ +L HF+ + A + + CCDNCR
Sbjct: 864 IHNEKFRSYKLKMVAKMEKYLHSSRCRRQIILCHFEDRQLQKASLDIMGTENCCDNCR 921
>gi|345781559|ref|XP_539984.3| PREDICTED: Werner syndrome ATP-dependent helicase [Canis lupus
familiaris]
Length = 1412
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 180/281 (64%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATA+ + +DI L L+
Sbjct: 633 ITLIAVDEAHCISEWGHDFRSSFRTLGSLKAILPSVPIVALTATASSSIREDIVRCLNLK 692
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P I TGFDRPNLYL K I+ DL + T+ +FEG TIIYCP++ E+V
Sbjct: 693 NPQITCTGFDRPNLYLEVRRKTGSILQDLDQFLVQKTSSIWEFEGPTIIYCPSRKTTEQV 752
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + +K R+EIH F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 753 TAELRKLKLACGAYHAGLDIKSRREIHHRFMRDEIQCVVATIAFGMGINKADIRKVIHYG 812
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + MM ++
Sbjct: 813 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADICLNRHRLS-EITSEKFRLYKLKMMAKM 871
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + ++CCDNCR
Sbjct: 872 EKYLHSTRCRRQLILSHFEDKQLRKASVGIMGTEQCCDNCR 912
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ + A + ++CCDNCR
Sbjct: 867 MMAKMEKYLHSTRCRRQLILSHFEDKQLRKASVGIMGTEQCCDNCR 912
>gi|440907539|gb|ELR57678.1| Werner syndrome ATP-dependent helicase [Bos grunniens mutus]
Length = 1430
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 182/281 (64%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ P VPI+A+TATA V +DI L L+
Sbjct: 654 ITLIAVDEAHCISEWGHDFRNSFRDLGCLKAEFPKVPIVALTATAGSSVREDIVCCLNLK 713
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K DI+ DL++ ++ +FEG TIIYCP++ + E+V
Sbjct: 714 DPQITCTGFDRPNLYLEVGRKTGDILQDLKQFLVCKSSSAWEFEGPTIIYCPSRKMTEQV 773
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S+ RK++H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 774 TAELKKLKLACGTYHAGLSINLRKQVHHRFMRDEIQCVIATVAFGMGINKADIRQVIHYG 833
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 834 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADMNLNRCLLS-EIRNEKFRLYKLKMMGKM 892
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + + CCDNC+
Sbjct: 893 EKYLYSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCK 933
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ + A + + CCDNC+
Sbjct: 888 MMGKMEKYLYSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCK 933
>gi|297307109|ref|NP_001137329.2| Werner syndrome ATP-dependent helicase [Bos taurus]
Length = 1404
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 182/281 (64%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ P VPI+A+TATA V +DI L L+
Sbjct: 628 ITLIAVDEAHCISEWGHDFRNSFRDLGCLKAEFPKVPIVALTATAGSSVREDIVCCLNLK 687
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K DI+ DL++ ++ +FEG TIIYCP++ + E+V
Sbjct: 688 DPQITCTGFDRPNLYLEVGRKTGDILQDLKQFLVCKSSSAWEFEGPTIIYCPSRKMTEQV 747
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S+ RK++H F++D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 748 TAELKKLKLACGTYHAGLSINLRKQVHHRFMRDEIQCVIATVAFGMGINKADIRQVIHYG 807
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 808 APKEMESYYQEIGRAGRDGLQSSCHVLWAPADMNLNRCLLS-EIRNEKFRLYKLKMMGKM 866
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + + CCDNC+
Sbjct: 867 EKYLYSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCK 907
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
MM ++EKYL CRR+ +L+HF+ + A + + CCDNC+
Sbjct: 862 MMGKMEKYLYSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCK 907
>gi|395847404|ref|XP_003796366.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Otolemur garnettii]
Length = 1432
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 199/349 (57%), Gaps = 49/349 (14%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q+VYMTPE+ + N L ++ EA+
Sbjct: 633 QIVYMTPEFCSGNLDLLQQL---------EANI--------------------------- 656
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
I LIA+DEAHC+S+WGHDFR S+R L L+ P VP++A+TATA+ + +D
Sbjct: 657 -------GITLIAVDEAHCISEWGHDFRSSFRNLGSLKTTFPSVPVVALTATASSSIRED 709
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCP 239
I +L LR+P I T FDRPNLYL K +I DL++ T+ E +FEG TIIYC
Sbjct: 710 IIHALNLRNPQITCTSFDRPNLYLEVLRKTGNIFQDLKQFLVRKTSSEWEFEGPTIIYCH 769
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ + E+V L + + YHA +S+ RKE+H F++D I+ V+AT AFGMGI+K D
Sbjct: 770 SRKMTEQVTAELRKLSLSCGTYHAGMSINVRKEVHHRFMRDEIQCVIATIAFGMGINKAD 829
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
+R VIHYGAPK++ +YYQEIGRAGRDGL S C+ + AD N N++ + +
Sbjct: 830 IRKVIHYGAPKEMESYYQEIGRAGRDGLESSCHLLWAPADLAINRFRLTEIQNET-FRLY 888
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
M+ ++ KYL CRR+ +L+HF+ + A S + +KCCDNCR
Sbjct: 889 KLKMLAKMSKYLNSSKCRRRIILSHFEDKQLRKASSGIMGTEKCCDNCR 937
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
M+ ++ KYL CRR+ +L+HF+ + A S + +KCCDNCR
Sbjct: 892 MLAKMSKYLNSSKCRRRIILSHFEDKQLRKASSGIMGTEKCCDNCR 937
>gi|443717544|gb|ELU08558.1| hypothetical protein CAPTEDRAFT_162090 [Capitella teleta]
Length = 818
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 179/281 (63%), Gaps = 13/281 (4%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
L+AIDEAHCVSQWGHDFR +YR L LR LP+VPI+A+TATATP V DIC SL L++P
Sbjct: 65 LVAIDEAHCVSQWGHDFRSAYRQLGTLRQKLPNVPIMALTATATPEVRRDICISLKLKNP 124
Query: 194 NIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+ + FDRPNL+L +K D+ ++L ++ + F G IIYCPTK E+ +V
Sbjct: 125 IMTCSSFDRPNLFLRVHMKSSAPKDLRSELMEVGG-KLSFGGPAIIYCPTKKASEEALNV 183
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
+ G+ YHA + +RK+ H F+ D I VVAT AFGMGIDKPDVR +IHYGAPK
Sbjct: 184 VKMLGVSCGLYHAGLPFSERKKTHKQFISDEISCVVATVAFGMGIDKPDVRKIIHYGAPK 243
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
D+ AYYQE+GRAGRDG +S C +Y ADF + + + ++ + + H M++++E Y
Sbjct: 244 DIEAYYQEMGRAGRDGDNSDCVVYYSPADFNISRFLLK-DVTSEKFKTHKLKMLQKMESY 302
Query: 371 LELRTCRRKYLLN-----HFKGSSVTVAESQVPPDKCCDNC 406
L CRR+ + N HF+ VT ++CCDNC
Sbjct: 303 LATTKCRRRLVFNQTILSHFEDKDVTDVGGT---NRCCDNC 340
>gi|432099984|gb|ELK28878.1| Werner syndrome ATP-dependent helicase [Myotis davidii]
Length = 1398
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ P VPI+A+TATA+ + +DI L L+
Sbjct: 619 ITLIAVDEAHCISEWGHDFRNSFRELGSLKAAFPSVPIVALTATASSSIREDIVRCLNLK 678
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P I TGFDRPNLYL K +I+ DL++ T+ +FEG TIIYCP++ + E+V
Sbjct: 679 NPQITCTGFDRPNLYLEVGQKTGNILQDLKQFLVQKTSSAWEFEGPTIIYCPSRKMTEQV 738
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + RKE+H F++D I+ VVAT AFGMGI+K DVR VIHYG
Sbjct: 739 TVELRKLNLACGTYHAGMDNSSRKEVHHKFMRDEIQCVVATIAFGMGINKADVRKVIHYG 798
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N +++ + + + MM ++
Sbjct: 799 APKEMESYYQEIGRAGRDGLQSSCHLLWTPADICLNRHRLN-EIHNEKFRLYKLKMMAKM 857
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + +KCCDNC+
Sbjct: 858 EKYLHSSRCRRQLILSHFEDKQLRKASLGIMGTEKCCDNCK 898
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 19 MMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCRQVVY 67
MM ++EKYL CRR+ +L+HF+ + A + +KCCDNC+ +Y
Sbjct: 853 MMAKMEKYLHSSRCRRQLILSHFEDKQLRKASLGIMGTEKCCDNCKFSLY 902
>gi|91091128|ref|XP_969655.1| PREDICTED: similar to werner syndrome helicase [Tribolium
castaneum]
gi|270013136|gb|EFA09584.1| hypothetical protein TcasGA2_TC011701 [Tribolium castaneum]
Length = 874
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 179/280 (63%), Gaps = 15/280 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+IVLIAIDEAHC+S WGHDFR YR L LR P VP++AVTATAT V DI SL L
Sbjct: 162 KIVLIAIDEAHCISSWGHDFRSQYRNLGNLRQIFPRVPVIAVTATATTRVRGDIVKSLQL 221
Query: 191 RDPNIINTGFDRPNLYLAASVKQDD-IMADLRKLTNFEN---QFEGSTIIYCPTKVICEK 246
RDP I+ +GFDRPNLY + DL K +E +F G TIIYC T+ E
Sbjct: 222 RDPLIVCSGFDRPNLYFEVYQRAGGGAFKDLTKAMVYEKSEWKFSGPTIIYCITRRQTED 281
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+C++L G++ R YHA +S K+R+E H FV+D + V+VAT AFGMGIDKPD+R VIHY
Sbjct: 282 LCEILKNCGVRCRVYHAGLSQKERQEAHEEFVRDKVDVIVATIAFGMGIDKPDIRNVIHY 341
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
G+ + +YYQE+GRAGRDGL + C T Y + DF I + N++ +++ T +++
Sbjct: 342 GSSNSVESYYQEVGRAGRDGLPARCVTIYSSGDF----QILR-NISGGSVKKE--TALRQ 394
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+E YL R CRR+++L F+ V E + P +CCD C
Sbjct: 395 IEDYLTTRKCRRRFILEFFEDE---VGEDK-PKQRCCDVC 430
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
FQ N S +T ++++E YL R CRR+++L F+ + E + P +CCD C
Sbjct: 375 FQILRNISGGSVKKETALRQIEDYLTTRKCRRRFILEFFEDE---VGEDK-PKQRCCDVC 430
Query: 63 RQVVY 67
Q +Y
Sbjct: 431 TQKLY 435
>gi|338720942|ref|XP_001915839.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Equus caballus]
Length = 1405
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 179/281 (63%), Gaps = 6/281 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ P VP++A+TATA+ + DDI L L+
Sbjct: 629 ITLIAVDEAHCISEWGHDFRNSFRNLGSLKTAFPLVPVVALTATASSSIRDDIVRCLELK 688
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKL----TNFENQFEGSTIIYCPTKVICEKV 247
+P I TGFDRPNLYL K +I+ DL++ T +FEG TIIYC ++ + E+V
Sbjct: 689 NPRITCTGFDRPNLYLEVGQKTGNILQDLKQFLVQKTCSAWEFEGPTIIYCLSRKMTEQV 748
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA + RKE+H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 749 TAELRKLQLACGTYHAGMGSNSRKEVHHRFMRDEIQCVVATIAFGMGINKADIRKVIHYG 808
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + D N ++ D + + + MM+++
Sbjct: 809 APKEMESYYQEIGRAGRDGLQSSCHLLWTPTDINLNRNRLS-DIPDEKFRLYKLKMMEKM 867
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + + CCDNCR
Sbjct: 868 EKYLRSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCR 908
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 9 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
D + + + MM+++EKYL CRR+ +L+HF+ + A + + CCDNCR
Sbjct: 853 DEKFRLYKLKMMEKMEKYLRSSKCRRQIILSHFEDKQLRKASVGIMGTENCCDNCR 908
>gi|391341494|ref|XP_003745065.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Metaseiulus
occidentalis]
Length = 869
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 188/322 (58%), Gaps = 23/322 (7%)
Query: 124 LFLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVV 180
LFL+ + I L+A+DEAHCVSQWGH+FR +YR L ELR ++P +A+TATA+ V
Sbjct: 304 LFLTNLNESVGICLVAVDEAHCVSQWGHEFRKTYRSLGELRTRFLEIPFMALTATASANV 363
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTIIY 237
+DI +SL L P I T FDRPNLYL K D+++ L STIIY
Sbjct: 364 QNDIESSLRLLQPWITVTPFDRPNLYLTVKRKTSPDRDLLSVLDPGV--------STIIY 415
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
CP +V E+V +L GI YHA ++ RKE FV ++VAT AFGMGIDK
Sbjct: 416 CPKRVTTEEVSMLLRSKGIPANAYHAGMTPSARKETQDAFVNGTNPIIVATIAFGMGIDK 475
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR V+HYGAP+ L AYYQEIGRAGRDG S+C TF+ ++DF ++F + D ++
Sbjct: 476 PDVRKVVHYGAPQSLEAYYQEIGRAGRDGEPSLCATFWDSSDF-DTYLLFVSKIRDMDVV 534
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC----RHNEMLE 413
H M+KR YLE CRRK+++ HF S AE KCCDNC
Sbjct: 535 RHKTRMLKRTRAYLETTGCRRKFMITHF---SPDEAERIPMRSKCCDNCDSELSKRAFTN 591
Query: 414 LEQVPRGGRM-VVENSEVWMST 434
L + GR+ V E+S ++++
Sbjct: 592 LPAIEDSGRVDVTEDSRLFLNA 613
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1 MIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCD 60
++F + D ++ H M+KR YLE CRRK+++ HF S AE KCCD
Sbjct: 522 LLFVSKIRDMDVVRHKTRMLKRTRAYLETTGCRRKFMITHF---SPDEAERIPMRSKCCD 578
Query: 61 NC 62
NC
Sbjct: 579 NC 580
>gi|324504342|gb|ADY41874.1| Werner syndrome ATP-dependent helicase 1 [Ascaris suum]
Length = 916
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 180/302 (59%), Gaps = 16/302 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
RI L+AIDEAHCVSQWGH+FR YRCLS +R + DVP++A+TATATP V DI +L +
Sbjct: 170 RIGLLAIDEAHCVSQWGHEFRSDYRCLSSIRDIIGDVPLMALTATATPEVKKDIIKNLHM 229
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKL-TNFEN----QFEGSTIIYCPTKVICE 245
R + T DR NLYL V+ + L+ L T ++ F G TIIYCPT+ E
Sbjct: 230 RQAVTLCTSLDRSNLYL--EVRSPTSIEGLQSLVTEVDDMRGKHFGGPTIIYCPTRASVE 287
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
V VLS G++ YHA +S K R + H FVKD I +VAT AFGMGIDKPDVR +IH
Sbjct: 288 DVNKVLSGMGVKCAMYHAGLSSKARSKAHENFVKDKITTIVATVAFGMGIDKPDVRNIIH 347
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTM 363
+GAPK + +YYQEIGRAGRDG S C FY + +N +I L D + H+ M
Sbjct: 348 FGAPKGIESYYQEIGRAGRDGFPSKCIVFYSDNEIAINRNRLIRDGKLKDP-YKAHAIEM 406
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRM 423
+ +EK+L TCRR +L+HF S +S P CCD C N +E E P +
Sbjct: 407 QRHMEKFLTGNTCRRFLMLSHFDAS----LKSSTPRAGCCDICDGN--IESENNPNKRTL 460
Query: 424 VV 425
V
Sbjct: 461 TV 462
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 13 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNC 62
+ H+ M + +EK+L TCRR +L+HF S +S P CCD C
Sbjct: 400 KAHAIEMQRHMEKFLTGNTCRRFLMLSHFDAS----LKSSTPRAGCCDIC 445
>gi|402877950|ref|XP_003902671.1| PREDICTED: Werner syndrome ATP-dependent helicase [Papio anubis]
Length = 1373
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 165/244 (67%), Gaps = 5/244 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VPI+A+TATAT + +DI L LR
Sbjct: 661 ITLIAVDEAHCISEWGHDFRNSFRKLGSLKTALPMVPIVALTATATSSIREDIVRCLNLR 720
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
+P II TGFDRPNLYL K +I+ DL+ K T+ +FEG TIIYCP++ + E+V
Sbjct: 721 NPQIICTGFDRPNLYLEVRRKTGNILQDLQPFLVKTTSSHWEFEGPTIIYCPSRKMTEQV 780
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + YHA +S +RK++H FV+D I+ V+AT AFGMGI+K D+R VIHYG
Sbjct: 781 TAELRKLNLSCETYHAGMSFSRRKDVHHRFVRDEIQCVIATIAFGMGINKADIRQVIHYG 840
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
APK++ +YYQEIGRAGRDGL S C+ + AD N + + + + + + MM ++
Sbjct: 841 APKEMESYYQEIGRAGRDGLQSSCHILWAPADINLNRHLL-TEIRNEKFRLYKLKMMAKM 899
Query: 368 EKYL 371
EKYL
Sbjct: 900 EKYL 903
>gi|341892349|gb|EGT48284.1| hypothetical protein CAEBREN_31081 [Caenorhabditis brenneri]
Length = 1069
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 177/306 (57%), Gaps = 10/306 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELR--LPLPDVPILAVTATATPVVIDDICTSLM 189
+ L+AIDEAHCVSQWGHDFR SYR L+ +R L +VP++A+TATAT V DD+ +L
Sbjct: 335 LSLLAIDEAHCVSQWGHDFRNSYRHLAAIRNRSDLCNVPMIALTATATVRVRDDVIENLR 394
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
LR+PNI T FDR NLY++ +D D+ L+ F G TIIYC TK + +
Sbjct: 395 LRNPNITTTSFDRKNLYISVHNSKDLATDMAEYLQTDEVKGRHFGGPTIIYCQTKQMVDD 454
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V L R G+++ YHA ++ QR++ H F++D I +VAT AFGMGIDKPDVR VIHY
Sbjct: 455 VNTALRRIGVRSAHYHAGLTKNQREKAHTEFMRDKITTIVATVAFGMGIDKPDVRNVIHY 514
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
G PKD+ +YYQEIGRAGRDG SVC F+ D + E+ E+ M+++
Sbjct: 515 GCPKDIESYYQEIGRAGRDGAPSVCRVFWAPKDLATIKFKLRNAQLKEEVIENLNLMLRQ 574
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
+E L CRR LL HF S A P CCD C EML Q + V
Sbjct: 575 LELVLTTVGCRRYQLLKHFDPSFTKPA---TPQADCCDRC--TEMLNGNQDISSSTLDVT 629
Query: 427 NSEVWM 432
W+
Sbjct: 630 TESKWL 635
>gi|2645409|gb|AAB87366.1| homolog of human Werners syndrome protein [Mus musculus]
Length = 643
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 184/281 (65%), Gaps = 9/281 (3%)
Query: 134 LIAIDEAHCV-SQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
L ++ + CV S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+D
Sbjct: 287 LCSLRKVICVPSEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLKD 346
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKVC 248
P I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 347 PQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQVT 406
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + + R YHA + + +RK++H ++D I+ VVAT AFG+GI+K D+R VIH GA
Sbjct: 407 AELGKLNLACRTYHAGMKISERKDVHHRLLRDEIQCVVATVAFGVGINKADIRKVIHNGA 466
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM ++
Sbjct: 467 PKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMMVKM 524
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQV-PPDKCCDNCR 407
EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 525 EKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 565
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQV-PPDKCCDNCR 63
++D + + + MM ++EKYL CRR+ +L+HF+ + A + +KCCDNCR
Sbjct: 508 IHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 565
>gi|308503486|ref|XP_003113927.1| CRE-WRN-1 protein [Caenorhabditis remanei]
gi|308263886|gb|EFP07839.1| CRE-WRN-1 protein [Caenorhabditis remanei]
Length = 1081
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 189/344 (54%), Gaps = 19/344 (5%)
Query: 102 HDFRPSYRCLSELRLPLPDVPILFLSRI-------PRIVLIAIDEAHCVSQWGHDFRPSY 154
H R Y C + ++FL R+ + L+AIDEAHCVSQWGHDFR SY
Sbjct: 336 HVSRNGYECERSGIIIFVSRTLVFLFRVNSKILEFSDLSLLAIDEAHCVSQWGHDFRNSY 395
Query: 155 RCLSELR--LPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVK 212
R L+ +R L +VP++A+TATAT V DD+ +L LR P I T FDR NLY++
Sbjct: 396 RHLAAIRNRSDLCNVPLIALTATATVRVRDDVIENLKLRRPQITTTSFDRKNLYISVHSS 455
Query: 213 QDDIMADLRKLTNFEN----QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLK 268
+D + D+ + ++ F G TIIYC TK + + V VL G+++ YHA ++
Sbjct: 456 KD-LATDMGEFLQTDDVKGRHFGGPTIIYCQTKQMVDDVNSVLRSIGVRSAHYHAGLTKN 514
Query: 269 QRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLS 328
QR+ H F++D I +VAT AFGMGIDKPDVR VIHYG PKD+ +YYQEIGRAGRDG
Sbjct: 515 QRERAHTEFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPKDIESYYQEIGRAGRDGAP 574
Query: 329 SVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGS 388
SVC F+ D + + E+ E+ M++++E L CRR LL HF
Sbjct: 575 SVCRVFWAPKDLNTIKFKLRNSQLKDEVIENLTLMLRQLELVLTTVGCRRYQLLKHF--- 631
Query: 389 SVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVENSEVWM 432
T A+ P CCD C EML Q + V W+
Sbjct: 632 DPTFAKPATPQADCCDRC--TEMLNGNQDVSSSTIDVATESKWL 673
>gi|311977672|ref|YP_003986792.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga
mimivirus]
gi|82000006|sp|Q5UPX0.1|YR290_MIMIV RecName: Full=Putative ATP-dependent RNA helicase R290
gi|55416912|gb|AAV50562.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204737|gb|ADO18538.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga
mimivirus]
gi|339061226|gb|AEJ34530.1| hypothetical protein MIMI_R290 [Acanthamoeba polyphaga mimivirus]
Length = 548
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 175/287 (60%), Gaps = 16/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I+ L I LIAIDEAHC+S +G DFR +YR ++ + LP+VPILA+TATAT +V
Sbjct: 135 IVKLEDFQGISLIAIDEAHCISAYGFDFRTAYREITFFKEILPNVPILALTATATNIVAK 194
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTN-FENQFEGSTIIYCPTK 241
DIC L L+ I FDRPNLYL K + D+ + N + NQ S IIYC TK
Sbjct: 195 DICKVLQLKTNEPIKASFDRPNLYLEVRTKSKNPANDIVPIINKYPNQ---SVIIYCLTK 251
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+K+ D+L+ + + YHA +S + + + H F+ + IK+VVAT AFGMGI+KPDVR
Sbjct: 252 KETQKIADILTVHKVVCGIYHAGLSNEHKTKTHTNFINNKIKIVVATIAFGMGINKPDVR 311
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHYGAPK++ YYQEIGRAGRDG S CY FY DF N N+ Q+
Sbjct: 312 VVIHYGAPKNIEGYYQEIGRAGRDGEKSYCYAFYNFQDFMIQRRFISQN-NNPNYQKTQL 370
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++++++KY+ LRTCRRK LL +F + +KC CDNC
Sbjct: 371 ALLEQMKKYVTLRTCRRKILLEYFDEET---------KEKCDFCDNC 408
>gi|351737443|gb|AEQ60478.1| DEAD/SNF2-like helicase [Acanthamoeba castellanii mamavirus]
gi|398257134|gb|EJN40742.1| hypothetical protein lvs_R238 [Acanthamoeba polyphaga
lentillevirus]
Length = 548
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 176/287 (61%), Gaps = 16/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I+ L I LIAIDEAHC+S +G DFR +YR ++ + LP+VPILA+TATAT +V
Sbjct: 135 IVKLEDFQGISLIAIDEAHCISAYGFDFRTAYREITFFKEILPNVPILALTATATNIVAK 194
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTN-FENQFEGSTIIYCPTK 241
DIC L L+ I FDRPNLYL +K + D+ + N + NQ S IIYC TK
Sbjct: 195 DICKVLQLKTDEPIKASFDRPNLYLEVRMKSKNPANDIIPIINKYPNQ---SVIIYCLTK 251
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+K+ D+L+ + + YHA +S + + + H F+ + IK+VVAT AFGMGI+KPDVR
Sbjct: 252 KETQKIADILTVHKVVCGIYHAGLSNEHKTKTHTNFINNKIKIVVATIAFGMGINKPDVR 311
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHYGAPK++ YYQEIGRAGRDG S CY FY DF N N+ Q+
Sbjct: 312 VVIHYGAPKNIEGYYQEIGRAGRDGEKSYCYAFYNFQDFMIQRRFISQN-NNPNYQKTQL 370
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++++++KY+ LRTCRRK LL +F + +KC CDNC
Sbjct: 371 ALLEQMKKYVTLRTCRRKILLEYFDEET---------KEKCDFCDNC 408
>gi|149057893|gb|EDM09136.1| rCG43045, isoform CRA_b [Rattus norvegicus]
Length = 1335
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 158/228 (69%), Gaps = 4/228 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRTLGSLKTALPLVPVIALSATASSSIREDIIRCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP+I TGFDRPNLYL K +I+ DL+ + T+ +FEG TIIYCP++ + E+V
Sbjct: 686 DPHITCTGFDRPNLYLEVERKTGNILQDLKPFLVRKTSSAWEFEGPTIIYCPSRKVTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + + YHA + + +RK+IH F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TVELGKLNVACQAYHAGMKISERKDIHHRFLRDEIQCVVATIAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE 355
APK++ +YYQEIGRAGRDGL S C+ + ADF + + N+SE
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTTRLNHCSSANNSE 853
>gi|74142907|dbj|BAE42489.1| unnamed protein product [Mus musculus]
Length = 862
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 164/238 (68%), Gaps = 7/238 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGHDFR S+R L L+ LP VP++A++ATA+ + +DI + L L+
Sbjct: 626 ITLIAVDEAHCISEWGHDFRSSFRMLGSLKTALPLVPVIALSATASSSIREDIISCLNLK 685
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLR----KLTNFENQFEGSTIIYCPTKVICEKV 247
DP I TGFDRPNLYL K +I+ DL+ + + +FEG TIIYCP++ + E+V
Sbjct: 686 DPQITCTGFDRPNLYLEVGRKTGNILQDLKPFLVRKASSAWEFEGPTIIYCPSRKMTEQV 745
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + + R YHA + + +RK++H F++D I+ VVAT AFGMGI+K D+R VIHYG
Sbjct: 746 TAELGKLNLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 805
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMM 364
APK++ +YYQEIGRAGRDGL S C+ + ADF T N++ + ++D + + + MM
Sbjct: 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIE--IHDEKFRLYKLKMM 861
>gi|195049699|ref|XP_001992771.1| GH24943 [Drosophila grimshawi]
gi|193893612|gb|EDV92478.1| GH24943 [Drosophila grimshawi]
Length = 681
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 175/282 (62%), Gaps = 3/282 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ LIAIDEAHC+S+WGH+FRP+YR LSE+R +P V LA+T TAT V +DIC L +R
Sbjct: 146 LALIAIDEAHCISKWGHEFRPAYRRLSEVRSAVPLVRFLALTGTATRRVREDICQQLQMR 205
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+P I+ +G DRPNL L K DI +DL+ ++ + GS II+ T E++ +
Sbjct: 206 NPLILCSGLDRPNLELTVRAKSADIWSDLQPYLSWAAEAAGSVIIFNNTIRDTEQMAQEI 265
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
SR+G++ YH+ + L+ ++ F D ++++ AT AFG+GIDKP+VR V+HYGAP D
Sbjct: 266 SRHGMRCHSYHSKLPLELKRRNQEQFTSDEVRLMAATTAFGLGIDKPNVRLVVHYGAPSD 325
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQEIGRAGRD L + C FY AD + + ++ E + + + + +Y
Sbjct: 326 MERYYQEIGRAGRDNLHAKCVLFYGDADAAIHQRLQHSQPLTAQRSEELQQLARVMLEYT 385
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ CRR+++LN+F T A SQ P CCDNCR + ++
Sbjct: 386 QSNQCRRQFILNYFDDQ--TAARSQ-PRRNCCDNCRKAQHIK 424
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 11 EIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYM 68
E+Q+ ++ M++ Y + CRR+++LN+F T A SQ P CCDNCR+ ++
Sbjct: 373 ELQQLARVMLE----YTQSNQCRRQFILNYFDDQ--TAARSQ-PRRNCCDNCRKAQHI 423
>gi|32564293|ref|NP_495324.2| Protein WRN-1 [Caenorhabditis elegans]
gi|29428119|sp|Q19546.2|WRN_CAEEL RecName: Full=Probable Werner syndrome ATP-dependent helicase
homolog 1
gi|351060519|emb|CCD68193.1| Protein WRN-1 [Caenorhabditis elegans]
Length = 1056
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 176/307 (57%), Gaps = 12/307 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELR--LPLPDVPILAVTATATPVVIDDICTSLM 189
I L+AIDEAHCVSQWGHDFR SYR L+E+R L ++P++A+TATAT V DD+ +L
Sbjct: 342 ISLLAIDEAHCVSQWGHDFRNSYRHLAEIRNRSDLCNIPMIALTATATVRVRDDVIANLR 401
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN----QFEGSTIIYCPTKVICE 245
LR P I T FDR NLY++ +D + DL + F G TIIYC TK + +
Sbjct: 402 LRKPLITTTSFDRKNLYISVHSSKD-MAEDLGLFMKTDEVKGRHFGGPTIIYCQTKQMVD 460
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
V VL R G+++ YHA ++ QR++ H F++D I +VAT AFGMGIDKPDVR VIH
Sbjct: 461 DVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIH 520
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
YG P ++ +YYQEIGRAGRDG S+C F+ D + + E+ E+ M++
Sbjct: 521 YGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKDLNTIKFKLRNSQQKEEVVENLTMMLR 580
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVV 425
++E L CRR LL HF S Q CCD C EML Q + V
Sbjct: 581 QLELVLTTVGCRRYQLLKHFDPSYAKPPTMQA---DCCDRC--TEMLNGNQDSSSSIVDV 635
Query: 426 ENSEVWM 432
W+
Sbjct: 636 TTESKWL 642
>gi|195133332|ref|XP_002011093.1| GI16195 [Drosophila mojavensis]
gi|193907068|gb|EDW05935.1| GI16195 [Drosophila mojavensis]
Length = 665
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 175/293 (59%), Gaps = 10/293 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ LIAIDEAHC+S+WGH+FRP+YR LS+LR +P V ILA+T TAT V DIC L +R
Sbjct: 140 LALIAIDEAHCISKWGHEFRPAYRQLSQLRSAVPQVRILALTGTATRRVRLDICEQLQMR 199
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P ++ + DRPNL L ++ + +DL++ N+ + EG+ II+ T E + L
Sbjct: 200 RPLVLCSNLDRPNLELTVRMRSSSLWSDLQQYLNWAAEAEGAVIIFSNTIRDTEHMAQEL 259
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
S G YH+ + L+ ++ F D+++++ AT AFGMGIDKP+VR V+HYGAP D
Sbjct: 260 SSRGKPCHSYHSKLPLEVKRRNQQDFASDVVQIMAATTAFGMGIDKPNVRLVVHYGAPSD 319
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQEIGRAGRDGL + C FY AD + + ++ E + + + + +Y
Sbjct: 320 MERYYQEIGRAGRDGLPAKCVLFYSEADAAIHRRLQHSQPVTAQRSEELQQLAQAMLEYT 379
Query: 372 ELRTCRRKYLLNHF--KGSSVTVAESQVPPDKCCDNCRHNEM----LELEQVP 418
++ CRR+Y+LN+F + S T+ + CCDNCR +E+E P
Sbjct: 380 QINQCRRQYILNYFDDRASLATLQQR----SNCCDNCRKARQAKPAVEVESAP 428
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 10/62 (16%)
Query: 11 EIQEHSKTMMKRVEKYLELRTCRRKYLLNHF--KGSSVTMAESQVPPDKCCDNCRQVVYM 68
E+Q+ ++ M++ Y ++ CRR+Y+LN+F + S T+ + CCDNCR+
Sbjct: 367 ELQQLAQAMLE----YTQINQCRRQYILNYFDDRASLATLQQR----SNCCDNCRKARQA 418
Query: 69 TP 70
P
Sbjct: 419 KP 420
>gi|356569961|ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
max]
Length = 920
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 178/296 (60%), Gaps = 21/296 (7%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
VP F S + + I L A+DEAHC+S+WGHDFR Y+ L +LR L DVP + +TATAT
Sbjct: 119 VPSSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATE 178
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI +SL L +P + FDR NL+ + + + +L + + E GSTII
Sbjct: 179 KVRYDIISSLKLNNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREISKEVTNGGSTII 238
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E++ + GI+ YH ++ K R+E H LFV+D ++V+VAT AFGMGID
Sbjct: 239 YCTTIKDVEQIFKSFAEAGIEAGMYHGQMNGKAREESHRLFVRDELQVMVATIAFGMGID 298
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y +DF K + D +
Sbjct: 299 KPNIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFY----CGDVKS 354
Query: 357 QEHSKTMMKRV---EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
++ K +M+ + E+Y L TCRRK+LL +F + P D+C CDNC+
Sbjct: 355 EKQRKAIMESLLAAERYCVLTTCRRKFLLEYFG--------EKFPADRCGNCDNCK 402
>gi|357121465|ref|XP_003562440.1| PREDICTED: Werner syndrome ATP-dependent helicase-like
[Brachypodium distachyon]
Length = 894
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/290 (45%), Positives = 170/290 (58%), Gaps = 12/290 (4%)
Query: 121 VPILFLSRI--PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S + I L+AIDEAHC+S+WGHDFRP Y+ L LR L VP +A+TATAT
Sbjct: 114 LPSRFWSNLQASGICLLAIDEAHCISEWGHDFRPEYKQLHSLRDHLVGVPFVALTATATE 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI TSL L +P+I FDRPNL+ + +++L K + GSTII
Sbjct: 174 RVRGDIATSLNLSNPHIAIGSFDRPNLFYGVKSCNRSVSFISELVKEVSKNCTVGGSTII 233
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E+V + + GI+ YH + K R++ H FV+D + V+VAT AFGMGID
Sbjct: 234 YCTTIKDTEQVHEAMVSAGIKANIYHGRMGSKAREDSHRSFVRDEVFVMVATIAFGMGID 293
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVRCVIHYG PK L +YYQE GR GRDGL SVC+ +Y+ +DFTK + N ++
Sbjct: 294 KPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSVCWLYYQRSDFTKGDFYCSEATNPTQR 353
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + M +KY CRRK LL +F S T + CDNC
Sbjct: 354 KAIMDSFMA-AQKYCLHTACRRKVLLQYFGQESTTDCGN-------CDNC 395
>gi|449462782|ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
Length = 906
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 175/296 (59%), Gaps = 23/296 (7%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
VP+ F S++ + I L A+DEAHC+S+WGHDFR Y+ L +LR LPD+P +A+TATAT
Sbjct: 114 VPMSFWSKLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATE 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAAS------VKQDDIMADLRKLTNFENQFEG 232
V DI SL ++DP + FDR NL+ + ++ + D+ K G
Sbjct: 174 KVRSDIINSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNEFVLDISKYV----ASGG 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E++ L GI YH + K R E H LF++D ++V+VAT AFG
Sbjct: 230 STIIYCTTIKDVEQIFKALEEAGISAGIYHGQMDKKSRAESHRLFIRDEVQVMVATVAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y +DF K + +
Sbjct: 290 MGIDKPNIRLVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKADFYCGESQT 349
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+++ + +++M ++Y + TCRR +LL +F + DKC CDNC
Sbjct: 350 ENQRRAIRESLMA-AQQYCSIATCRRNFLLGYFG--------ERFHSDKCGNCDNC 396
>gi|428307721|ref|YP_007144546.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
gi|428249256|gb|AFZ15036.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
Length = 728
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 173/293 (59%), Gaps = 14/293 (4%)
Query: 118 LPDVPILFLSRIPRIVLI---AIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
L D LFL ++ R V I AIDEAHCVSQWGHDFRP YR L +LR DVPI A+TA
Sbjct: 121 LTDKFTLFLEQVQRQVGISAFAIDEAHCVSQWGHDFRPEYRQLKQLRQRYRDVPIFALTA 180
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TAT V +DI L LR P+I + F+RPNLY +KQ L KL Q+EGS
Sbjct: 181 TATNRVREDIIQQLALRQPSIHISSFNRPNLYYEVQLKQKQAYLQLLKLIR---QYEGSG 237
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
I+YC ++ ++V L ++GI PYHA ++ ++R F++D ++V+VAT AFGMG
Sbjct: 238 IVYCLSRRHVDEVAFRLQKDGISALPYHAGMTDEERAYNQTRFIRDDVQVMVATIAFGMG 297
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
I+KPDVR VIHY P++L YYQE GRAGRDG + C + T D N + + +D+
Sbjct: 298 INKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPARCTLLFGTGDLRTINYLIEQK-SDA 356
Query: 355 EIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
+ Q ++ ++++ Y E CRRK L++F E CDNCR
Sbjct: 357 QEQRVARQQLQKMIDYAEGTDCRRKIQLSYF-------GERFAGNCDNCDNCR 402
>gi|242046956|ref|XP_002461224.1| hypothetical protein SORBIDRAFT_02g043160 [Sorghum bicolor]
gi|241924601|gb|EER97745.1| hypothetical protein SORBIDRAFT_02g043160 [Sorghum bicolor]
Length = 901
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 175/290 (60%), Gaps = 12/290 (4%)
Query: 121 VPILFLSRI--PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S + I L+A+DEAHC+S+WGHDFR Y+ L LR L DVP +A+TATAT
Sbjct: 114 LPSRFWSNLQAAGICLLAVDEAHCISEWGHDFRIEYKQLHSLRDLLVDVPFVALTATATE 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI TSL+LR P+++ FDR NL+ + +++L K + ++ STII
Sbjct: 174 RVRQDISTSLVLRSPHVVVGSFDRHNLFYGVKTCNRSMSFVSELVKDVSKKSAAGESTII 233
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E+V + L +GI+ YH + + R+E H F++D + V+VAT AFGMGID
Sbjct: 234 YCTTIRDTEQVHEALVTSGIKAGIYHGQMGSRAREESHRSFIRDEVLVMVATIAFGMGID 293
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVRCVIHYG PK L +YYQE GR GRDGL S+C+ +Y+ +DFTK + N ++
Sbjct: 294 KPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSICWLYYQRSDFTKADFYCSEAKNGTQR 353
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + M +KY L TCRR++LL +F E + CDNC
Sbjct: 354 KAIMDSFMA-AQKYCLLATCRRRFLLQYF-------GEERNTDCGNCDNC 395
>gi|222637699|gb|EEE67831.1| hypothetical protein OsJ_25607 [Oryza sativa Japonica Group]
Length = 905
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 121 VPILFLSRI--PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S + I L+A+DEAHC+S+WGHDFR Y+ L LR L VP +A+TATAT
Sbjct: 114 LPSRFWSNLQAAGICLLAVDEAHCISEWGHDFRTEYKQLHMLRDLLVGVPFVALTATATQ 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI TSL LR P+I+ FDRPNL+ + + +L K + GSTII
Sbjct: 174 RVRGDIATSLTLRIPHIVVGSFDRPNLFYGVKSCNRSMAFINELVKDVSKNCTVGGSTII 233
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E+V + L GI++ YH + K R+E H FV+D + V+VAT AFGMGID
Sbjct: 234 YCTTIRETEQVHEALVAAGIKSSIYHGRMGNKAREESHRSFVRDEVLVMVATIAFGMGID 293
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVRCVIHYG PK L +YYQE GR GRDGL SVC+ +Y+ +DF K++ +++
Sbjct: 294 KPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSVCWLYYQRSDFMKSDFY----CAEAKS 349
Query: 357 QEHSKTMMKR---VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Q H K +M+ +KY L TC RK+LL +F E + C+NC
Sbjct: 350 QTHRKAIMESFMAAQKYCLLATCHRKFLLQYF-------GEDRTTDCGNCENC 395
>gi|115474113|ref|NP_001060655.1| Os07g0681600 [Oryza sativa Japonica Group]
gi|33146670|dbj|BAC80016.1| putative ATP-dependent DNA helicase recQ [Oryza sativa Japonica
Group]
gi|113612191|dbj|BAF22569.1| Os07g0681600 [Oryza sativa Japonica Group]
gi|215707030|dbj|BAG93490.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 886
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/293 (45%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 121 VPILFLSRI--PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S + I L+A+DEAHC+S+WGHDFR Y+ L LR L VP +A+TATAT
Sbjct: 114 LPSRFWSNLQAAGICLLAVDEAHCISEWGHDFRTEYKQLHMLRDLLVGVPFVALTATATQ 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI TSL LR P+I+ FDRPNL+ + + +L K + GSTII
Sbjct: 174 RVRGDIATSLTLRIPHIVVGSFDRPNLFYGVKSCNRSMAFINELVKDVSKNCTVGGSTII 233
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E+V + L GI++ YH + K R+E H FV+D + V+VAT AFGMGID
Sbjct: 234 YCTTIRETEQVHEALVAAGIKSSIYHGRMGNKAREESHRSFVRDEVLVMVATIAFGMGID 293
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVRCVIHYG PK L +YYQE GR GRDGL SVC+ +Y+ +DF K++ +++
Sbjct: 294 KPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSVCWLYYQRSDFMKSDFY----CAEAKS 349
Query: 357 QEHSKTMMKR---VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Q H K +M+ +KY L TC RK+LL +F E + C+NC
Sbjct: 350 QTHRKAIMESFMAAQKYCLLATCHRKFLLQYF-------GEDRTTDCGNCENC 395
>gi|218200270|gb|EEC82697.1| hypothetical protein OsI_27361 [Oryza sativa Indica Group]
Length = 905
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 121 VPILFLSRI--PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S + I L+A+DEAHC+S+WGHDFR Y+ L LR L VP +A+TATAT
Sbjct: 114 LPSRFWSNLQAAGICLLAVDEAHCISEWGHDFRTEYKQLHMLRDLLVGVPFVALTATATQ 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI TSL LR+P+I+ FDRPNL+ + + +L K + GSTII
Sbjct: 174 RVRGDIATSLTLRNPHIVVGSFDRPNLFYGVKSCNRSMAFINELVKDVSKNCTVGGSTII 233
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E+V + L GI++ YH + K R+E H FV+D + V+VAT AFGMGID
Sbjct: 234 YCTTIRETEQVHEALVAAGIKSSIYHGRMGNKAREESHRSFVRDEVLVMVATIAFGMGID 293
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVRCVIHYG PK L +YYQE GR GRDGL SVC+ +Y+ +DF K++ +++
Sbjct: 294 KPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSVCWLYYQRSDFMKSDFY----CAEAKS 349
Query: 357 QEHSKTMMKR---VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
H K +M+ +KY L TC RK+LL +F E + C+NC
Sbjct: 350 HTHRKAIMESFMAAQKYCLLATCHRKFLLQYF-------GEDRTTDCGNCENC 395
>gi|449517403|ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis
sativus]
Length = 919
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/296 (41%), Positives = 175/296 (59%), Gaps = 23/296 (7%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
VP+ F S++ + I L A+DEAHC+S+WGHDFR Y+ L +LR LPD+P +A+TATAT
Sbjct: 114 VPMSFWSKLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATE 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAAS------VKQDDIMADLRKLTNFENQFEG 232
V DI SL ++DP + FDR NL+ + ++ + D+ K G
Sbjct: 174 KVRSDIINSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNEFVLDISKYV----ASGG 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E++ L GI YH + K R E H LF++D ++V+VAT AFG
Sbjct: 230 STIIYCTTIKDVEQIFKALEEAGISAGIYHGQMDKKSRAESHRLFIRDELQVMVATIAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y +DF K + +
Sbjct: 290 MGIDKPNIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKADFYCGESQT 349
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+++ + +++M ++Y + TCRR +LL +F + DKC CDNC
Sbjct: 350 ENQRRAIRESLMA-AQQYCSIATCRRNFLLGYFG--------ERFHSDKCGNCDNC 396
>gi|302755182|ref|XP_002961015.1| hypothetical protein SELMODRAFT_402571 [Selaginella moellendorffii]
gi|300171954|gb|EFJ38554.1| hypothetical protein SELMODRAFT_402571 [Selaginella moellendorffii]
Length = 935
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 165/279 (59%), Gaps = 13/279 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L+A+DEAHC+S+WGHDFRP Y+ LS +R LP+VP +A+TATAT V +DI SLML
Sbjct: 124 VSLLAVDEAHCISEWGHDFRPEYQRLSSIRSKLPEVPFVALTATATHKVREDILKSLMLT 183
Query: 192 DPNIINTGFDRPNLYLAAS--VKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ I + FDRPN+ + + +L + + GSTI+YC T ++V +
Sbjct: 184 NAYIAVSSFDRPNILYGVKPLTRSNAFREELATEVVKDLEQGGSTIVYCNTIKDVDEVTN 243
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + G R YH+ + LK+R ++H F+KD ++VVVAT AFGMGIDKPD+R VIHYG P
Sbjct: 244 ALVKAGAAARAYHSKLGLKERNDVHRTFLKDELQVVVATVAFGMGIDKPDIRRVIHYGCP 303
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L +YYQE GR GRDGL S C+ ++ ADFT+ + + E ++ +
Sbjct: 304 KSLESYYQESGRCGRDGLPSACWLYFTRADFTRAE-FYTSEVRTQERKKAVADAFAASQG 362
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y TCRRK++L +F D C CDNC
Sbjct: 363 YCTTTTCRRKFILQYFG--------ELTKNDNCGNCDNC 393
>gi|302767148|ref|XP_002966994.1| hypothetical protein SELMODRAFT_408296 [Selaginella moellendorffii]
gi|300164985|gb|EFJ31593.1| hypothetical protein SELMODRAFT_408296 [Selaginella moellendorffii]
Length = 901
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 166/279 (59%), Gaps = 13/279 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L+A+DEAHC+S+WGHDFRP Y+ LS +R LP+VP +A+TATAT V +DI SLML+
Sbjct: 124 VSLLAVDEAHCISEWGHDFRPEYQRLSSIRSKLPEVPFVALTATATHKVREDILKSLMLK 183
Query: 192 DPNIINTGFDRPNLYLAAS--VKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ I + FDR N++ + + +L + + GSTI+YC T ++V +
Sbjct: 184 NAYIAVSSFDRSNIFYGVKPLTRSNAFREELATEVVKDLEQGGSTIVYCNTIKDVDEVTN 243
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + G R YH+ + LK+R ++H F+KD ++VVVAT AFGMGIDKPD+R VIHYG P
Sbjct: 244 ALVKAGAAARAYHSKLGLKERNDVHRTFLKDELQVVVATVAFGMGIDKPDIRRVIHYGCP 303
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L +YYQE GR GRDGL S C+ ++ ADFT+ + + E ++ +
Sbjct: 304 KSLESYYQESGRCGRDGLPSACWLYFTRADFTRAEY-YTSEVRTQERKKAVADAFAASQG 362
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y TCRRK++L +F D C CDNC
Sbjct: 363 YCTTTTCRRKFILQYFG--------EFTKNDNCGNCDNC 393
>gi|428166873|gb|EKX35841.1| hypothetical protein GUITHDRAFT_146193 [Guillardia theta CCMP2712]
Length = 865
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 166/291 (57%), Gaps = 22/291 (7%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ ++ L AIDEAHCVSQWG DFRPSY L +LR +VPI+A+TA+A P V DD+
Sbjct: 155 LASSGQLALFAIDEAHCVSQWGVDFRPSYALLRKLRESFDNVPIMALTASAVPRVRDDLF 214
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
+ L LR P I + DRPNL + S KQ AD+ + + ++ GS I+Y T E
Sbjct: 215 SILNLRSPIISVSTCDRPNLKITVSRKQT-FAADVNYICDILSKMSGSAIVYVATTGEAE 273
Query: 246 KVCDVL---SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
K+C + S N I R YH ++ R H F+ +IKVVVAT AFGMGIDKPD+RC
Sbjct: 274 KLCTAILQKSENKITARYYHGKDKMEARDTTHHQFLTGVIKVVVATTAFGMGIDKPDIRC 333
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHYGAPK YYQ IGRAGRDGL S C +DF+K N F N + + +K
Sbjct: 334 VIHYGAPKTFEEYYQHIGRAGRDGLQSDCIMICSDSDFSKYNDDFYLN----GLSQDNKV 389
Query: 363 MMKRVEKYL-----ELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+K YL E CRRK +L+ F ES D+C CDNC
Sbjct: 390 AVKNSTSYLRTFAMEQDKCRRKLVLDFF-------GESSAWGDRCGDCDNC 433
>gi|195398941|ref|XP_002058079.1| GJ15886 [Drosophila virilis]
gi|194150503|gb|EDW66187.1| GJ15886 [Drosophila virilis]
Length = 692
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 164/276 (59%), Gaps = 2/276 (0%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ LIAIDEAHC+S+WGH+FRP+YR LS+LR +P V +LA+T TAT V DIC L +R
Sbjct: 142 LALIAIDEAHCISKWGHEFRPAYRQLSQLREAVPQVRLLALTGTATLRVRRDICEQLQMR 201
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P ++ +G DRPNL L K + +DL+ ++ + G+ IIY T E + L
Sbjct: 202 RPLLLCSGLDRPNLELTVRPKGAQLWSDLQPYLSWAEEAAGAVIIYSNTIRDTEHMAQEL 261
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
SR G YH+ + L+ ++ F D ++++ AT AFG+GIDKP+VR V+HYGAP D
Sbjct: 262 SRRGKSCHSYHSKLPLELKRSNQQDFASDRVRIMAATTAFGLGIDKPNVRLVVHYGAPSD 321
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQEIGRAGRDGL++ C F+ D + + Q ++ E + + + +Y
Sbjct: 322 MERYYQEIGRAGRDGLTAKCVLFWGDTDAATHQRLQQSQPLTAQRSEELQQLASAMLEYT 381
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
+ CRR+Y+L +F + A + CCDNCR
Sbjct: 382 QTTQCRRQYILRYFDDQATLGALQRR--HNCCDNCR 415
>gi|356537724|ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Glycine max]
Length = 920
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 175/296 (59%), Gaps = 21/296 (7%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
VP F S + + I L A+DEAHC+S+WGHDFR Y+ L +LR L DVP + +TATAT
Sbjct: 119 VPSSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATE 178
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI SL L P + DR NL+ + + + +L + + E GSTII
Sbjct: 179 KVQYDIIGSLKLNYPFVTIGSVDRTNLFYGVKLLNRGQSFIDELVREISKEVTNGGSTII 238
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E++ + GI+ YH ++ K R+E H LFV+D ++V+VAT AFGMGID
Sbjct: 239 YCTTIKDVEQIFKSFAEAGIEAGMYHGQMNGKAREESHRLFVRDELQVMVATIAFGMGID 298
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y +DF K + + +
Sbjct: 299 KPNIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFY----CGEVKS 354
Query: 357 QEHSKTMMKRV---EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
++ K +M+ + E+Y L TCRRK+LL +F + P D+C CDNC+
Sbjct: 355 EKQRKAIMESLLAAERYCVLTTCRRKFLLEYFG--------EKFPADRCGNCDNCK 402
>gi|298251484|ref|ZP_06975287.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
gi|297546076|gb|EFH79944.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
Length = 739
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 160/275 (58%), Gaps = 13/275 (4%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIA+DEAHCVS+WGHDFRP YR L LR+ P VP +A+TATAT V +DI T L L DP
Sbjct: 137 LIAVDEAHCVSEWGHDFRPEYRQLGRLRVRYPQVPAMALTATATERVQEDILTQLKLNDP 196
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSR 253
+ ++RPNLY K + ++L + Q + IIYC ++ + + D L
Sbjct: 197 YVEVASYNRPNLYYEVRQKHQNTYSELVQF--LREQSDAPVIIYCQSRKNVDTIADSLQH 254
Query: 254 NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
+GI+ PYHA +S +R F+ D + V+VAT AFGMGI KPDVR VIHY PK L
Sbjct: 255 HGIRALPYHAGLSTDERTRNQDSFIHDDVPVLVATIAFGMGIAKPDVRAVIHYDMPKSLE 314
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQE GRAGRDGL + C FY+ D K I ++ E+ + ++ +++V Y E
Sbjct: 315 GYYQESGRAGRDGLEARCILFYQHGDRMKYEFILAQKEDEHELLK-ARQQIQQVITYSES 373
Query: 374 RTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
CRRK LL +F G + T + C CDNC
Sbjct: 374 TGCRRKALLAYF-GENFT-------EENCGNCDNC 400
>gi|448825605|ref|YP_007418536.1| putative ATP-dependent RNA helicase [Megavirus lba]
gi|444236790|gb|AGD92560.1| putative ATP-dependent RNA helicase [Megavirus lba]
Length = 467
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 166/282 (58%), Gaps = 22/282 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S +G DFR +YR L+ + LP++PILA+TATAT V+ DIC +L L+
Sbjct: 63 ISLIAIDEAHCISSYGFDFRKAYRELTLFKEILPNIPILALTATATNVIGKDICKTLQLK 122
Query: 192 DPNIINTGFDRPNLYLAASVK----QDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
N I T FDRPNL+L K DDI+ ++K N S IIYC TK E V
Sbjct: 123 TQNPIKTSFDRPNLFLEVRCKTSRSSDDIIPIVKKHKN------ESVIIYCVTKKETENV 176
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L I YH + K + + H FV +KV+VAT AFGMGI+K DVR VIHYG
Sbjct: 177 AAILKTFKIDCGMYHGDLDAKIKSKAHRKFVSGKVKVMVATIAFGMGINKSDVRAVIHYG 236
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ YYQEIGRAGRDG S CY FY DF + ++I + +E ++
Sbjct: 237 APKNIEGYYQEIGRAGRDGEKSYCYAFYNYRDFAIQESLIKNSTMTTPTYKELLTKLLGV 296
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ YL + CRR+ LL +F+ + PDKC CDNC
Sbjct: 297 MKNYLTAKRCRRQILLEYFE---------EDYPDKCNFCDNC 329
>gi|363540725|ref|YP_004894671.1| mg620 gene product [Megavirus chiliensis]
gi|350611890|gb|AEQ33334.1| putative ATP-dependent RNA helicase [Megavirus chiliensis]
Length = 548
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 166/282 (58%), Gaps = 22/282 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S +G DFR +YR L+ + LP++PILA+TATAT V+ DIC +L L+
Sbjct: 144 ISLIAIDEAHCISSYGFDFRKAYRELTLFKEILPNIPILALTATATNVIGKDICKTLQLK 203
Query: 192 DPNIINTGFDRPNLYLAASVK----QDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
N I T FDRPNL+L K DDI+ ++K N S IIYC TK E V
Sbjct: 204 TQNPIKTSFDRPNLFLEVRCKTSRSSDDIIPIVKKHKN------ESVIIYCVTKKETENV 257
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L I YH + K + + H FV +KV+VAT AFGMGI+K DVR VIHYG
Sbjct: 258 AAILKTFKIDCGMYHGDLDAKIKSKAHRKFVSGKVKVMVATIAFGMGINKSDVRAVIHYG 317
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ YYQEIGRAGRDG S CY FY DF + ++I + +E ++
Sbjct: 318 APKNIEGYYQEIGRAGRDGEKSYCYAFYNYRDFAIQESLIKNSTMTTPTYKELLTKLLGV 377
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ YL + CRR+ LL +F+ + PDKC CDNC
Sbjct: 378 MKNYLTAKRCRRQILLEYFE---------EDYPDKCNFCDNC 410
>gi|373849778|ref|ZP_09592579.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV5]
gi|372475943|gb|EHP35952.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV5]
Length = 620
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 167/283 (59%), Gaps = 16/283 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R + +AIDEAHC+S+WGHDFRP YR ++ LR LP+VP++A+TATAT V +DI
Sbjct: 127 RAWNVAALAIDEAHCISEWGHDFRPEYRQIARLREFLPEVPVMALTATATGRVREDIVKH 186
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L LR+P + F+RPNL K L+++ +F + E S IIYC T+ EK
Sbjct: 187 LQLREPAVYVASFNRPNLSYRVLPKDQP----LKQIIDFVKKREDESGIIYCATRATAEK 242
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ L+ G RPYHA +S R LF++D +K++ AT AFGMGI+KP+VR VIH+
Sbjct: 243 TAESLASRGYAARPYHAGLSADDRSANQELFLRDDVKIICATIAFGMGINKPNVRWVIHH 302
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ YYQE GRAGRDGL + C Y D K F + D+ Q+ ++ ++
Sbjct: 303 DLPKNIEGYYQETGRAGRDGLPADCLLLYSAGDIVKQTH-FIDEITDAHEQQVARRQLRL 361
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+ Y E TCRR+ LL++F G + V D C CDNC+
Sbjct: 362 MSHYAEDTTCRRRTLLDYF-GEAFAV-------DNCGACDNCQ 396
>gi|393908486|gb|EJD75078.1| CBR-WRN-1 protein [Loa loa]
Length = 1137
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/281 (44%), Positives = 173/281 (61%), Gaps = 12/281 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELR-LPLPDVPILAVTATATPVVIDDICTSLML 190
I L+A+DEAHCVS+WGH+FRPSYR L+++R L +VP++A+TAT+T V DI +SL L
Sbjct: 438 INLLAVDEAHCVSEWGHEFRPSYRQLAKIRYLFGKNVPVMALTATSTEQVRTDIASSLEL 497
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQ----FEGSTIIYCPTKVICEK 246
P I DRPNLYL SV+ + L L + + + F G TIIYC T+++ ++
Sbjct: 498 HQPVITLAPLDRPNLYL--SVRTPTSLEGLLHLLSEDERNGKHFNGPTIIYCSTRILVDE 555
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V + LS+ G+Q YHA +S R++ H F+KD I ++AT AFGMGIDK DVR VIHY
Sbjct: 556 VYEYLSKEGVQCTRYHAGMSTVARRKAHECFMKDRITTIIATVAFGMGIDKADVRNVIHY 615
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNM-IFQPNLNDSEIQEHSKTMMK 365
GAPK++ +YYQEIGRAGRDG S F+K + TK+ I ++H M+
Sbjct: 616 GAPKNMESYYQEIGRAGRDGCPSKSIVFFKDQELTKHRYCILGEQSWKENYKKHLLEMLS 675
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+E++L +CRR LL+HF + + CCD C
Sbjct: 676 LMERFLHAESCRRFLLLSHFDER----VKKEAGNVGCCDIC 712
>gi|414888136|tpg|DAA64150.1| TPA: hypothetical protein ZEAMMB73_018829 [Zea mays]
Length = 898
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 171/290 (58%), Gaps = 12/290 (4%)
Query: 121 VPILFLSRI--PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S + I L+A+DEAHC+S+WGHDFR Y+ L LR L VP +A+TATAT
Sbjct: 114 LPSRFWSNLQASGICLLAVDEAHCISEWGHDFRTEYKQLHSLRNLLVGVPFVALTATATE 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNFENQFEGSTII 236
V DI TSL+L P+++ FDR NL+ + +++L K + + STII
Sbjct: 174 RVRQDISTSLVLCSPHVVVGSFDRHNLFYGVKTCNRSMSFISELVKDVSKRSDVGESTII 233
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC T E+V + L +GI+ YH + + R+E H F++D + V+VAT AFGMGID
Sbjct: 234 YCTTIRDTEQVHEALVTSGIKTGIYHGQMGSRAREESHRSFIRDEVLVMVATIAFGMGID 293
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVRCVIHYG PK L +YYQE GR GRDGL S+C+ +Y+ +D TK + N+++
Sbjct: 294 KPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSICWLYYQRSDITKADFYCSEAKNETQR 353
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + M +KY L TCRR++LL +F E CDNC
Sbjct: 354 KAIMDSFMA-AQKYCLLATCRRRFLLQYF-------GEEWNIDCGNCDNC 395
>gi|391232165|ref|ZP_10268371.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV1]
gi|391221826|gb|EIQ00247.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV1]
Length = 620
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 167/283 (59%), Gaps = 16/283 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R + +AIDEAHC+S+WGHDFRP YR ++ LR LP+VP++A+TATAT V +DI
Sbjct: 127 RAWNVAALAIDEAHCISEWGHDFRPEYRQIARLREFLPEVPVMALTATATGRVREDIVKH 186
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L LR+P + F+RPNL K L+++ +F + E S IIYC T+ EK
Sbjct: 187 LQLREPAVYVASFNRPNLSYRVLPKDQP----LKQIIDFVKKREDESGIIYCATRATAEK 242
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ L+ G RPYHA +S R LF++D +K++ AT AFGMGI+KP+VR VIH+
Sbjct: 243 TAESLASRGYAARPYHAGLSADDRSANQELFLRDDVKIICATIAFGMGINKPNVRWVIHH 302
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ YYQE GRAGRDGL + C Y D K F + D+ Q+ ++ ++
Sbjct: 303 DLPKNIEGYYQETGRAGRDGLPADCLLLYSAGDIVKQTH-FIDEITDAHEQQVARRQLRL 361
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+ Y E TCRR+ LL++F G + + D C CDNC+
Sbjct: 362 MSHYAEDTTCRRRTLLDYF-GETFAI-------DNCGACDNCQ 396
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 43/163 (26%)
Query: 3 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKC--CD 60
F + D+ Q+ ++ ++ + Y E TCRR+ LL++F G + + D C CD
Sbjct: 342 FIDEITDAHEQQVARRQLRLMSHYAEDTTCRRRTLLDYF-GETFAI-------DNCGACD 393
Query: 61 NCRQVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD 120
NC++ P + T L+A CV YRC R
Sbjct: 394 NCQE-----PRETYDGT----------LVAQKFLSCV----------YRCRQASRF---G 425
Query: 121 VPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLP 163
V ++ ++ + + E+ +++WGHD +Y EL P
Sbjct: 426 VGMMHITEV-----LTGSESEKITKWGHDRLSTYGIGKELSRP 463
>gi|371943982|gb|AEX61810.1| putative ATP-dependent RNA helicase [Megavirus courdo7]
Length = 467
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 166/282 (58%), Gaps = 22/282 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S +G DFR +YR L+ + LP++PILA+TATAT V+ DIC +L L+
Sbjct: 63 ISLIAIDEAHCISSYGFDFRKAYRELTLFKEILPNIPILALTATATNVIGKDICKTLQLK 122
Query: 192 DPNIINTGFDRPNLYLAASVK----QDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ I T FDRPNL+L K DDI+ ++K N S IIYC TK E V
Sbjct: 123 TQDPIKTSFDRPNLFLEVRCKTSRSSDDIIPIVKKHKN------ESVIIYCVTKKETENV 176
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L I YH + K + + H FV +KV+VAT AFGMGI+K DVR VIHYG
Sbjct: 177 AAILKTFKIDCGMYHGDLDAKIKSKAHRKFVSGKVKVMVATIAFGMGINKSDVRAVIHYG 236
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ YYQEIGRAGRDG S CY FY DF + ++I + +E ++
Sbjct: 237 APKNIEGYYQEIGRAGRDGEKSYCYAFYNYRDFAIQESLIKNSTMTTPTYKELLTKLLGV 296
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ YL + CRR+ LL +F+ + PDKC CDNC
Sbjct: 297 MKNYLTAKRCRRQILLEYFE---------EDYPDKCNFCDNC 329
>gi|425701542|gb|AFX92704.1| putative ATP-dependent RNA helicase [Megavirus courdo11]
Length = 548
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 166/282 (58%), Gaps = 22/282 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S +G DFR +YR L+ + LP++PILA+TATAT V+ DIC +L L+
Sbjct: 144 ISLIAIDEAHCISSYGFDFRKAYRELTLFKEILPNIPILALTATATNVIGKDICKTLQLK 203
Query: 192 DPNIINTGFDRPNLYLAASVK----QDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ I T FDRPNL+L K DDI+ ++K N S IIYC TK E V
Sbjct: 204 TQDPIKTSFDRPNLFLEVRCKTSRSSDDIIPIVKKHKN------ESVIIYCVTKKETENV 257
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L I YH + K + + H FV +KV+VAT AFGMGI+K DVR VIHYG
Sbjct: 258 AAILKTFKIDCGMYHGDLDAKIKSKAHRKFVSGKVKVMVATIAFGMGINKSDVRAVIHYG 317
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLNDSEIQEHSKTMMKR 366
APK++ YYQEIGRAGRDG S CY FY DF + ++I + +E ++
Sbjct: 318 APKNIEGYYQEIGRAGRDGEKSYCYAFYNYRDFAIQESLIKNSTMTTPTYKELLTKLLGV 377
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ YL + CRR+ LL +F+ + PDKC CDNC
Sbjct: 378 MKNYLTAKRCRRQILLEYFE---------EDYPDKCNFCDNC 410
>gi|449510454|ref|XP_004163669.1| PREDICTED: Bloom syndrome protein homolog [Cucumis sativus]
Length = 1050
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 168/283 (59%), Gaps = 21/283 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L A+DEAHC+S+WGHDFR Y+ L +LR LP +P +A+TATAT V +DI SL ++
Sbjct: 492 ICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRNDIINSLKMK 551
Query: 192 DPNIINTGFDRPNLYLAAS------VKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
DP + FDR NL+ + + ++ D+ K GSTIIYC T E
Sbjct: 552 DPQVTIGSFDRTNLFYGVKSFDRGPLFMNKLVLDISKYV----ASGGSTIIYCTTIKDVE 607
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L GI YH + R E H LF++D ++V+VAT AFGMGIDKP+VR VIH
Sbjct: 608 QISKALEEAGISAGIYHGLMDKTSRAESHRLFIRDEVQVMVATVAFGMGIDKPNVRQVIH 667
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
YG PK L +YYQE GR GRDG++SVC+ +Y +DF K + +L +++ +++M
Sbjct: 668 YGCPKSLESYYQESGRGGRDGIASVCWLYYTRSDFAKADFYCGESLTENQRTAIMESLMA 727
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++Y + TCRR +LL++F S + +KC CDNC
Sbjct: 728 -AQQYCSIATCRRNFLLSYFGEKSQS--------EKCGNCDNC 761
>gi|383450034|ref|YP_005356755.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
gi|380501656|emb|CCG52698.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
Length = 731
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 181/322 (56%), Gaps = 22/322 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL+ + ++ +AIDEAHC+S+WGHDFRP YR L + L DVPI+ +TATATP V +
Sbjct: 130 IQFLNEV-KLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRQLGDVPIIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N+ F+RPNLY K ++ AD+ + F Q +G S +IYC ++
Sbjct: 189 DILKNLDMPDANVFKASFNRPNLYYEVRPKTKNVEADIIR---FIKQHKGKSGVIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL NGI PYHA + K R + +F+ + ++VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVEEIAQVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 306 FVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMAGKPVAE----QEI 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH--------NEM 411
+++ V Y E RRKYLL++F V D DN R+ NE+
Sbjct: 362 GYALLQEVVAYAETSMSRRKYLLHYFGEEFDEVNGEGADMD---DNVRNPKKKVEAKNEV 418
Query: 412 LELEQVPRGGRMVVENSEVWMS 433
+ L +V R + + + EV ++
Sbjct: 419 VTLLEVIRATKQLYKPKEVILA 440
>gi|325280334|ref|YP_004252876.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
gi|324312143|gb|ADY32696.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
Length = 727
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 160/283 (56%), Gaps = 13/283 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL +I +I A+DEAHC+S+WGHDFR YR + + + PI+A+TATATP V +DI
Sbjct: 131 FLKKI-KISFFAVDEAHCISEWGHDFRTEYRKIRPIVEEIGKAPIIALTATATPKVQNDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY KQ D+ D+ K +N S IIYC ++
Sbjct: 190 QKNLDMMDAQVFKSSFNRPNLYYEVRPKQGDVTKDIIKF--IKNHEGKSGIIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ +VLS NGI+ PYHA + R F+ + + V+VAT AFGMGIDKPDVR VI
Sbjct: 248 EELAEVLSINGIKAAPYHAGMDASTRSTNQDRFLMEEVDVIVATIAFGMGIDKPDVRFVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSKTM 363
HY PK L YYQE GRAGRDG +C T+Y D K Q + + EI K +
Sbjct: 308 HYDIPKSLEGYYQETGRAGRDGGEGICLTYYSFKDIQKLEKFMQGKPIAEQEI---GKQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ Y E CRRK LL++F T E CCDNC
Sbjct: 365 LMETVAYAETSLCRRKVLLHYF---GETYEEDNCG---CCDNC 401
>gi|395645903|ref|ZP_10433763.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
gi|395442643|gb|EJG07400.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
Length = 724
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 181/343 (52%), Gaps = 30/343 (8%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
F++R P + LIAIDEAHC+S+WGH+FRP YR LS LR P VPI+A+TATA P V +DI
Sbjct: 125 FINRFP-VRLIAIDEAHCISEWGHNFRPEYRQLSALREHFPPVPIVALTATAIPAVREDI 183
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
CT L L D F+RPNL K + L + N S IIYC ++
Sbjct: 184 CTQLQLSDVREYIGSFNRPNLSYRVVPKNKPVEFILDYIGQHPND---SGIIYCLSRKAT 240
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + + L +G YHA + + RK++ F+KD I ++ AT AFGMGIDKPDVR VI
Sbjct: 241 EDLAETLVEHGHMASAYHAGLLPEVRKKVQEAFIKDDISIICATVAFGMGIDKPDVRYVI 300
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+ PK + AYYQE GRAGRDG C Y D K + + + D E + M
Sbjct: 301 HHDLPKSVEAYYQESGRAGRDGQPGECILLYSRGDLAKVRYLLEHDDQDEEQSGIAFKKM 360
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH-NEMLE-------- 413
+ V Y E +CRRKYLL +F + P + C CDNC H E+ +
Sbjct: 361 QEVVDYCETNSCRRKYLLAYFG--------EEYPGETCDACDNCTHPQELFDGTGVAQNI 412
Query: 414 ---LEQVPR--GGRMVVENSEVWMSTEARPGREAFEFLPHLKT 451
+ Q+P G M+ + + S +A GR F+ LP T
Sbjct: 413 IRCVRQLPTKYGAGMITDI--LLGSKKAEIGRLRFDALPAYAT 453
>gi|223940604|ref|ZP_03632448.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
gi|223890722|gb|EEF57239.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
Length = 728
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 162/275 (58%), Gaps = 10/275 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L AIDEAHCVS+WGHDFRP YR +S+LR P+VP +A+TATAT V +DI +L LR
Sbjct: 139 VNLFAIDEAHCVSEWGHDFRPEYRAISKLRELFPEVPFMALTATATERVREDIIRALSLR 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+P I F+RPNL K A + L+ + S I+YC ++ E V L
Sbjct: 199 EPQIFVASFNRPNLTYRVHAKSG---AYEQTLSFIRARPRESGIVYCHSRKTAESVAQKL 255
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ +G+ RPYHA + ++R LF++D ++VV AT AFGMGI+KP+VR VIHY PK+
Sbjct: 256 NEDGVSARPYHAGLPGEERSRNQELFLRDEVRVVCATIAFGMGINKPNVRFVIHYDLPKN 315
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQE GRAGRDGL S C + D K + E Q+ ++ ++++ Y
Sbjct: 316 VEGYYQETGRAGRDGLPSECLLLFSPGDVVKQTGFINEKTDPHE-QQLAREQLQQMVHYA 374
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E+ +CRR LL++F G VA + CDNC
Sbjct: 375 EIASCRRASLLDYF-GEEFPVANCE-----ACDNC 403
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 161/276 (58%), Gaps = 11/276 (3%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +GS I+YC ++ +KV + L ++
Sbjct: 201 IHTASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGSGIVYCISRKTVDKVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GIDALPYHAGMDDRERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
CRR +L +F ES CDNCR+ +
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNGK 405
>gi|441432471|ref|YP_007354513.1| DEAD/SNF2-like helicase [Acanthamoeba polyphaga moumouvirus]
gi|440383551|gb|AGC02077.1| DEAD/SNF2-like helicase [Acanthamoeba polyphaga moumouvirus]
Length = 546
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 171/291 (58%), Gaps = 22/291 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I+ L+ I L+AIDEAHC+S +G DFR +YR L+ + LP +PILA+TATAT ++
Sbjct: 135 IIELNEKKGISLVAIDEAHCISSYGFDFRKAYRELTLFKEILPQIPILALTATATHIIGK 194
Query: 183 DICTSLMLRDPNIINTGFDRPNLYL----AASVKQDDIMADLRKLTNFENQFEGSTIIYC 238
DIC +L L+ I T FDRPNL+L +S +DI+ ++K ENQ S IIYC
Sbjct: 195 DICKTLQLKTQEPIKTSFDRPNLFLEVRSKSSKASNDIIPIIQK---HENQ---SVIIYC 248
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
TK E + +L I+ YH + K + + H FV + ++VAT AFGMGI+K
Sbjct: 249 VTKKETENIAKILKTFKIKCGMYHGDLDSKVKSKAHKNFVNGKVNIMVATIAFGMGINKS 308
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLNDSEIQ 357
DVR VIHYGAPK++ YYQEIGRAGRDG S CY FY DF + ++I + +
Sbjct: 309 DVRAVIHYGAPKNIEGYYQEIGRAGRDGDKSYCYAFYNFRDFAIQESLIKTSTMTTQAYK 368
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
E+ ++ ++ YL + CRR+ LL +F + PDKC CDNC
Sbjct: 369 ENLLKLLGVMKNYLTAKRCRRQILLEYF---------DEEYPDKCNFCDNC 410
>gi|374629362|ref|ZP_09701747.1| ATP-dependent DNA helicase, RecQ family [Methanoplanus limicola DSM
2279]
gi|373907475|gb|EHQ35579.1| ATP-dependent DNA helicase, RecQ family [Methanoplanus limicola DSM
2279]
Length = 1165
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 167/286 (58%), Gaps = 13/286 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ +I LIA+DEAHC+S WGH+FRP YR + LR PDVPI+A+TATA P V +
Sbjct: 133 ISFLKKL-KISLIAVDEAHCISMWGHNFRPEYREIRVLRDTFPDVPIIALTATAIPEVRN 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTK 241
DI L LRDPN+ F+R NLY K+ ++ + N+ GS IIYC ++
Sbjct: 192 DIIKQLELRDPNVYVGSFNRENLYYYVKEKK----KAKEQILQYLNENHGSCGIIYCLSR 247
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ L NG +P+HA++ ++E F+ ++ +T AFGMG+DKPD+R
Sbjct: 248 KTTEEIAGFLRNNGFNAKPFHANLQEDVKRETQEEFLYGKTPIICSTVAFGMGVDKPDIR 307
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHS 360
VIHY PKDL +YYQE GRAGRD +S C FY DF+K NM+++ N +S + +
Sbjct: 308 FVIHYDPPKDLESYYQETGRAGRDRENSDCIFFYSLGDFSKIRNMVYEENSGNSGRRSIA 367
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E CRRKYLL++F + P CDNC
Sbjct: 368 MKRINDLINFCETSQCRRKYLLSYFG------EDYNEEPCPGCDNC 407
>gi|449462784|ref|XP_004149120.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
Length = 822
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 172/296 (58%), Gaps = 23/296 (7%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P+ F S++ + I L A+DEAHC+S WGH+FR Y L R LP +P +A+TATA+
Sbjct: 114 LPMSFWSKLKKAGICLFAVDEAHCISDWGHNFRAEYELLDNFRDILPGLPFVALTATASE 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAAS------VKQDDIMADLRKLTNFENQFEG 232
V +DI SL ++DP + FDR NL+ + ++++ D+ K G
Sbjct: 174 KVRNDIINSLKMKDPQVTIGSFDRTNLFYGVKFFNHRRLLMNELVLDISKYVGSG----G 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E++ L GI YHA + + R E H LFV+D ++V+VAT AFG
Sbjct: 230 STIIYCRTIKDVEQISKSLKEAGISAGIYHAQMVKESRAESHRLFVRDELQVMVATVAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y +DF K + +
Sbjct: 290 MGIDKPNIRLVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKAELYCGDSPT 349
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++E +++M ++Y + TCRR +LL + S + +KC CDNC
Sbjct: 350 ENERTAIMESLMA-AQQYCSIATCRRNFLLGYLGEKSQS--------EKCGNCDNC 396
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 161/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDAS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY K ++L + +GS I+YC ++ ++V + L ++
Sbjct: 201 IHIASFNRPNLYYEVRAKTS---KSYQQLYQYIKGQKGSGIVYCISRKTVDQVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA ++ ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|189462633|ref|ZP_03011418.1| hypothetical protein BACCOP_03325 [Bacteroides coprocola DSM 17136]
gi|189430794|gb|EDU99778.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 607
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/285 (43%), Positives = 164/285 (57%), Gaps = 20/285 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + RI L AIDEAHC+SQWGHDFRP Y L LR PDVP++A+TATA + DI
Sbjct: 121 FLMKDIRISLFAIDEAHCISQWGHDFRPEYTQLKILRQQFPDVPVVALTATADKITRQDI 180
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
L ++DP I + FDRPNL L +Q + M R + +F + G S IIYC ++
Sbjct: 181 IRQLAMKDPQIFISSFDRPNLSLDVKRGFQQKEKM---RTIFDFIARHRGESGIIYCMSR 237
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
EKV ++L +GI YHA +S R+ F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 SKTEKVAEMLEEHGIATAVYHAGLSTAAREAAQDDFINDRVQVVCATIAFGMGIDKSNVR 297
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK + ++YQEIGRAGRDGL S FY D ++ +S QE +
Sbjct: 298 WVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSFGDI----VLLSKFAAESNQQEINM 353
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 354 EKLNRMQQYAETDICRRRILLNYF-GETM---------DHDCGNC 388
>gi|451927310|gb|AGF85188.1| helicase [Moumouvirus goulette]
Length = 546
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 164/279 (58%), Gaps = 16/279 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+AIDEAHC+S +G DFR +YR L+ + LP PILA+TATAT ++ DIC +L L+
Sbjct: 144 ISLVAIDEAHCISSYGFDFRKAYRELTLFKEILPQTPILALTATATHIIGKDICKTLQLK 203
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTN-FENQFEGSTIIYCPTKVICEKVCDV 250
I T FDRPNL+L K + D+ + ENQ S IIYC TK E + +
Sbjct: 204 TQEPIKTSFDRPNLFLEVRSKSNKASNDIIPIIQKHENQ---SIIIYCVTKKETENIVKI 260
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L I+ YH + K + + H FV + V+VAT AFGMGI+K DVR VIHYGAPK
Sbjct: 261 LKTFKIECGMYHGDLDSKVKSKAHKNFVNGKVNVMVATIAFGMGINKSDVRAVIHYGAPK 320
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
++ YYQEIGRAGRDG +S CY FY DF + ++I + +E+ ++ ++
Sbjct: 321 NIEGYYQEIGRAGRDGKNSYCYAFYNYRDFAIQESLIKTSTMTTPAYKENLLKLLGIMKN 380
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
YL + CRR+ LL +F+ + PDKC CDNC
Sbjct: 381 YLTAKRCRRQILLEYFE---------EEYPDKCNFCDNC 410
>gi|223558023|gb|ACM91029.1| ATP-dependent DNA helicase RecQ [uncultured bacterium URE4]
Length = 731
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/280 (43%), Positives = 154/280 (55%), Gaps = 17/280 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +L +
Sbjct: 139 ISFYAVDEAHCISEWGHDFRPEYRKIRSIIEDIQPAPVIALTATATPKVQSDILKNLRIS 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
D + + F+RPNLY K D + + F Q G S IIYC ++ E++ +
Sbjct: 199 DATVFKSSFNRPNLYYEVRDKVDT----EKDIIRFIRQNPGKSGIIYCLSRKKVEELAQL 254
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LS NGIQ PYHA + K R E F+ + I+V+VAT AFGMGIDKPDVR VIHY PK
Sbjct: 255 LSINGIQALPYHAGLDAKTRAENQDRFLMEDIQVIVATIAFGMGIDKPDVRFVIHYDIPK 314
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ YYQE GRAGRDG +C T+Y D K Q QE K ++ Y
Sbjct: 315 SIEGYYQETGRAGRDGQEGLCITYYSYKDIQKLEKFMQGKPVAE--QEIGKQLLAETVAY 372
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDK--CCDNCRH 408
E CRRK LLN+F P D CCDNC H
Sbjct: 373 AESSQCRRKLLLNYFG--------EDYPQDNCGCCDNCLH 404
>gi|395801803|ref|ZP_10481058.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395435992|gb|EJG01931.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 731
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 178/323 (55%), Gaps = 16/323 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +P I +AIDEAHC+S+WGHDFRP YR L + L VPI+ +TATATP V +
Sbjct: 130 VAFLQSVP-ISFVAIDEAHCISEWGHDFRPEYRNLRNIIKQLGKVPIIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N F+RPNLY K +I +D+ + F Q +G S IIYC ++
Sbjct: 189 DILKNLDMADANTFKASFNRPNLYYEVRTKTKNIESDIIR---FIKQHKGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + +VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVESIAEVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 306 FVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAE----QEI 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH-----NEMLEL 414
+++ V Y E RRK+LL++F + D N +H +++++L
Sbjct: 362 GFALLQEVVAYAETSMSRRKFLLHYFGEEFDSETGEGADMDDNVRNPKHKVEAKDQVVKL 421
Query: 415 EQVPRGGRMVVENSEVWMSTEAR 437
++ R + + ++ E+ + R
Sbjct: 422 LEIVRDTKHIYKSKEIVFTLIGR 444
>gi|146298045|ref|YP_001192636.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146152463|gb|ABQ03317.1| ATP-dependent DNA helicase, RecQ family [Flavobacterium johnsoniae
UW101]
Length = 731
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 178/318 (55%), Gaps = 16/318 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +P I +AIDEAHC+S+WGHDFRP YR L + L VPI+ +TATATP V +
Sbjct: 130 VAFLQSVP-ISFVAIDEAHCISEWGHDFRPEYRNLRTIIKQLGKVPIIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N F+RPNLY K I +D+ + F Q +G S IIYC ++
Sbjct: 189 DILKNLDMSDANTFKASFNRPNLYYEVRTKTKSIESDIIR---FIKQHKGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + +VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVESIAEVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 306 FVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAE----QEI 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH--NEMLELEQV 417
+++ V Y E RRK+LL++F G +E+ D DN R+ N++ EQV
Sbjct: 362 GFALLQEVVAYAETSMSRRKFLLHYF-GEEFD-SETGEGAD-MDDNVRNPKNKIEAKEQV 418
Query: 418 PRGGRMVVENSEVWMSTE 435
+ +V + ++ S E
Sbjct: 419 VKLLEIVRDTKHIYKSKE 436
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 161/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDAS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY K ++L + +GS I+YC ++ ++V + L ++
Sbjct: 201 IHIASFNRPNLYYEVRAKTS---KSYQQLYQYIKGKKGSGIVYCISRKTVDQVAEHLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA ++ ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 160/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +GS I+YC ++ +KV + L ++
Sbjct: 201 IHIASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGSGIVYCISRKTVDKVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GIDALPYHAGMDDRERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFSGNCGNCDNCRNG 404
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 161/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDAS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY K ++L + +GS I+YC ++ ++V + L ++
Sbjct: 201 IHIASFNRPNLYYEVRAKTS---KSYQQLYQYIKGKKGSGIVYCISRKTVDQVAEHLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA ++ ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|29349252|ref|NP_812755.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|380693604|ref|ZP_09858463.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
gi|383120164|ref|ZP_09940895.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|29341160|gb|AAO78949.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837322|gb|EES65422.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 726
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/329 (40%), Positives = 173/329 (52%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K ++I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTNNIDKDIIKF--IKNNSEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + ++V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSMTRTKNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCLTFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F G T + C CDNC + E EL V
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNCLNPKKQVEAQELLCAVIEA 420
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 421 IIAVKENFKADYIIDILQGRETSEVQAHL 449
>gi|399026913|ref|ZP_10728551.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398075677|gb|EJL66783.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 731
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 156/266 (58%), Gaps = 11/266 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +P I +AIDEAHC+S+WGHDFRP YR L + L VPI+ +TATATP V +
Sbjct: 130 VAFLQSVP-ISFVAIDEAHCISEWGHDFRPEYRNLKNIIKQLGSVPIIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N F+RPNLY K +I +D+ + F Q +G S IIYC ++
Sbjct: 189 DILKNLDMSDANTFKASFNRPNLYYEVRTKTKNIESDIIR---FIKQHKGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + +VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVETIAEVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 306 FVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAE----QEI 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 362 GFALLQEVVAYAETSMSRRKFLLHYF 387
>gi|325298909|ref|YP_004258826.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324318462|gb|ADY36353.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 606
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 172/300 (57%), Gaps = 27/300 (9%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L+E+ L D+ I L AIDEAHC+SQWGHDFRP Y L+ LR P VP
Sbjct: 113 RLLAEINYLLKDI---------HISLFAIDEAHCISQWGHDFRPEYTQLAVLREQFPHVP 163
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL-RKLTNFE 227
I+A+TATA + +DI L +RDP I + FDRPNL L VK+ + R + F
Sbjct: 164 IIALTATADKITREDIVKQLAMRDPQIFISSFDRPNLSL--DVKRGYQQKEKNRAVLEFI 221
Query: 228 NQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVV 286
+ +G S I+YC ++ EKV D+L +G+ YHA +S R + F+ D ++VV
Sbjct: 222 TRHKGESGIVYCMSRNTTEKVADMLEEHGVSTAVYHAGLSSTIRDKAQEDFINDRVQVVC 281
Query: 287 ATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMI 346
AT AFGMGIDK +VR VIHY PK + ++YQEIGRAGRDGL S FY AD ++
Sbjct: 282 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSFADI----IM 337
Query: 347 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++S QE + +KR+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 338 LSRFASESGQQEVNMEKLKRMQQYAEADICRRRILLNYF-GETM---------DHDCGNC 387
>gi|441500281|ref|ZP_20982448.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441435974|gb|ELR69351.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 723
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 166/294 (56%), Gaps = 23/294 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ +IAIDEAHC+SQWGHDFRP Y L+ L+ P+VP++A+TATA + D
Sbjct: 130 INFLKDQAKLSMIAIDEAHCISQWGHDFRPEYTQLATLKSVFPEVPVVALTATADKLTQD 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTK 241
DI L L +P + F+R N+Y S K+ +L F N+ + T IIY ++
Sbjct: 190 DILQQLKLHNPKKFVSSFNRENIYYFVSPKR----RSYDQLLQFLNKHKDDTGIIYTLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + + L +G RPYHA + R + LF+KD IK++ AT AFGMGIDK +VR
Sbjct: 246 ASAESLAEQLIADGYDARPYHAGLDRDVRDKHQDLFIKDQIKIITATIAFGMGIDKSNVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V+H PK++ YYQE GRAGRDGL S FY AD K + N + S+
Sbjct: 306 FVVHMDLPKNIEGYYQETGRAGRDGLKSEALLFYSYADVKKLKSFVEVEGN----TQQSE 361
Query: 362 TMMKRVE---KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNE 410
M+K++ +Y ELRTCRRKYLLN+F + D+C CD C E
Sbjct: 362 IMLKKLNEMAEYGELRTCRRKYLLNYF---------DEEAADECGSCDVCLSEE 406
>gi|302890734|ref|XP_003044250.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
gi|256725172|gb|EEU38537.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
Length = 1302
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 15/291 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I IDEAHC+SQWGHDFRP Y+ L ++R P VP++A+TATAT VI DI +L +
Sbjct: 831 KLARIVIDEAHCISQWGHDFRPDYKALGQVRQRYPGVPVMALTATATQNVIADIRHNLGM 890
Query: 191 RDPNIINTGFDRPNLYL-----AASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
+ F+RPNLY + K D +A L +L + NQ S I+Y ++ E
Sbjct: 891 DRCQTFSQSFNRPNLYYEVRPKTTNNKTIDSIASLIRL-QYRNQ---SGIVYTISRKNAE 946
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
KV + L++ GI R YHAH+ +++ E+ + + +KVVVAT AFGMGIDKPDVR V+H
Sbjct: 947 KVAESLTKQGIMARHYHAHVDPREKVEVQDGWQRGQVKVVVATVAFGMGIDKPDVRFVMH 1006
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
+G PK L YYQE GRAGRDG S C FY D + E +E +M+
Sbjct: 1007 HGLPKSLEGYYQETGRAGRDGNPSDCILFYGKGDIRVLKKLIADGEGSEEQKERQMSMLN 1066
Query: 366 RVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
RV + + R+ CRR +L +F G T + + K CDNC+ + E +
Sbjct: 1067 RVTTFCDNRSDCRRAEILRYF-GEEFTAGQCR----KTCDNCKAGLIFEQQ 1112
>gi|126662148|ref|ZP_01733147.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
gi|126625527|gb|EAZ96216.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
Length = 731
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 160/266 (60%), Gaps = 11/266 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL+ +P I +AIDEAHC+S+WGHDFRP YR L + L DVP++ +TATATP V +
Sbjct: 130 IEFLNSVP-ISFVAIDEAHCISEWGHDFRPEYRNLRNIVRLLGDVPMIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N F+RPNLY K +I +D+ + F Q +G S +IYC ++
Sbjct: 189 DILKNLDMPDANTFKASFNRPNLYYEVRTKTKNIESDIIR---FIKQHKGKSGVIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL NGI PYHA + K R + +F+ + ++VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVEEIAQVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K + L+ + QE
Sbjct: 306 FVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDIEK----LEKFLSGKPVAEQEI 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 362 GFALLQEVVAYAETSMSRRKFLLHYF 387
>gi|428201759|ref|YP_007080348.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
gi|427979191|gb|AFY76791.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
Length = 708
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 163/284 (57%), Gaps = 15/284 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHCVS+WGHDFRP YR L +LR P VP+ A+TATAT V +DI L LR
Sbjct: 138 ITAFAIDEAHCVSEWGHDFRPEYRQLIQLRQRYPHVPMFALTATATKRVQEDIIQQLGLR 197
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P I F+RPN+Y K+ L KL + +GS I+YC ++ +++ L
Sbjct: 198 QPGIHLASFNRPNIYYEVQPKERRSYNQLLKLIRTQ---QGSGIVYCLSRRNVDEIAFRL 254
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
++GI PYHA I+ + R F++D +KV+VAT AFGMGIDKPDVR VIHY P++
Sbjct: 255 QKDGISTVPYHAGITDEARTLNQTRFIRDDVKVIVATIAFGMGIDKPDVRFVIHYDLPRN 314
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L +YYQE GRAGRDG + C F DF + I +D + Q ++ +++V Y
Sbjct: 315 LESYYQESGRAGRDGEPANCTLFLSLGDFKRIEYIIDQK-SDPQEQRIARQQLRQVINYA 373
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
E CRR +L +F + P C CDNCR+ + +E
Sbjct: 374 EGTECRRTIILRYF---------GERFPGNCASCDNCRNPKPIE 408
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 161/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDAS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY K ++L + +GS I+YC ++ ++V + L ++
Sbjct: 201 IHIASFNRPNLYYEVQPKTS---KSYQQLYQYIKGKKGSGIVYCISRKTVDQVAEHLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA ++ ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 161/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDAS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY K ++L + +GS I+YC ++ ++V + L ++
Sbjct: 201 IHIASFNRPNLYYEVQPKTS---KSYQQLYQYIKGKKGSGIVYCISRKTVDQVAEHLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA ++ ++R E F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|297745728|emb|CBI15784.3| unnamed protein product [Vitis vinifera]
Length = 969
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 166/296 (56%), Gaps = 24/296 (8%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S++ + I L A+DEAHC+S+WGHDFR Y+ L +LR L DVP + +TATAT
Sbjct: 114 IPGSFWSKLLKVGICLFAVDEAHCISEWGHDFRMEYKQLDKLRAILLDVPFVGLTATATK 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAA------SVKQDDIMADLRKLTNFENQFEG 232
V DI SL +RDPN+ FDR NL+ S D+ + ++ K +
Sbjct: 174 KVRMDIINSLKMRDPNVFIGSFDRKNLFYGVKSFIRNSQFMDEFVGEISKFVASSD---- 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E++ L GI+ YH ++ R+E H +F++D + V+VAT AFG
Sbjct: 230 STIIYCTTIKDVEQIYKSLQEAGIKAGIYHGQMANSAREESHRIFIRDEVHVMVATIAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y DF K + F
Sbjct: 290 MGIDKPNIRHVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYNRGDFMKAD--FYCGEA 347
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + + Y TCRRK+LL +F + DKC CDNC
Sbjct: 348 TGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFG--------EKFESDKCGNCDNC 395
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 155/252 (61%), Gaps = 4/252 (1%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIA+DEAHC+S+WGHDFRP YR L L+ P VPI+A+TATAT V DI L +P
Sbjct: 130 LIAVDEAHCISEWGHDFRPDYRNLRRLKDIFPGVPIMALTATATEKVRQDILNQLNFENP 189
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSR 253
NI + F+R NL+ K++ L+ L EN+ + S IIYC ++ E + L
Sbjct: 190 NIFISSFNRDNLFFRVIEKKNSFEKLLKLL---ENRRKESVIIYCFSRKDTENLALNLRS 246
Query: 254 NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
G YHA + +RK+ F++D I ++VAT AFGMGIDKPDVR V+HY PK L
Sbjct: 247 EGFSALAYHAGLDSAKRKKTQEDFIQDKINIIVATIAFGMGIDKPDVRMVVHYTFPKSLE 306
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQE+GRAGRDGL + C FY AD K+ F ++D ++ ++ ++ V Y +L
Sbjct: 307 GYYQEVGRAGRDGLPAECVMFYTFADARKHRY-FINVMDDENLKRQTERKLQEVMDYADL 365
Query: 374 RTCRRKYLLNHF 385
+CRR+++L++F
Sbjct: 366 NSCRRRHILSYF 377
>gi|359478480|ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
vinifera]
Length = 913
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 166/296 (56%), Gaps = 24/296 (8%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S++ + I L A+DEAHC+S+WGHDFR Y+ L +LR L DVP + +TATAT
Sbjct: 114 IPGSFWSKLLKVGICLFAVDEAHCISEWGHDFRMEYKQLDKLRAILLDVPFVGLTATATK 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAA------SVKQDDIMADLRKLTNFENQFEG 232
V DI SL +RDPN+ FDR NL+ S D+ + ++ K +
Sbjct: 174 KVRMDIINSLKMRDPNVFIGSFDRKNLFYGVKSFIRNSQFMDEFVGEISKFVASSD---- 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E++ L GI+ YH ++ R+E H +F++D + V+VAT AFG
Sbjct: 230 STIIYCTTIKDVEQIYKSLQEAGIKAGIYHGQMANSAREESHRIFIRDEVHVMVATIAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y DF K + F
Sbjct: 290 MGIDKPNIRHVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYNRGDFMKAD--FYCGEA 347
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + + Y TCRRK+LL +F + DKC CDNC
Sbjct: 348 TGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFG--------EKFESDKCGNCDNC 395
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 163/284 (57%), Gaps = 18/284 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I I +DEAHCVS+WGHDFRP YR LS LR P +P++A+TATAT V DI L L+
Sbjct: 134 ISSIVVDEAHCVSEWGHDFRPDYRQLSRLRERFPTIPVIALTATATHRVRTDITEQLSLK 193
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P + F+RPNLY +++ L +LT + + EGS IIYC ++ EK+ L
Sbjct: 194 KPFVHVASFNRPNLYYEV-IEKSRGKVSLSELTGYIKETEGSGIIYCMSRKQVEKLASEL 252
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ NGI PYHA +S + R + F++D ++++VAT AFGMGI+KPDVR VIHY P+
Sbjct: 253 NENGISALPYHAGLSNETRTDHQTRFIRDDVQIMVATVAFGMGINKPDVRFVIHYDLPQT 312
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ----PNLND--SEIQEHSKTMMK 365
+ YYQE GRAGRDG + C F+ D + + Q P N+ + Q ++ ++
Sbjct: 313 IEGYYQESGRAGRDGEPARCTLFFSPGDIKQADWFIQNKVHPETNEPLEDEQRIARQQLR 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
++ Y + CRR LL +F +V C CDNCR
Sbjct: 373 QIAAYADSTLCRRTTLLGYF---------GEVFGGNCGQCDNCR 407
>gi|147845197|emb|CAN79469.1| hypothetical protein VITISV_016935 [Vitis vinifera]
Length = 447
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 166/296 (56%), Gaps = 24/296 (8%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P F S++ + I L A+DEAHC+S+WGHDFR Y+ L +LR L DVP + +TATAT
Sbjct: 114 IPGSFWSKLLKVGICLFAVDEAHCISEWGHDFRMEYKQLDKLRAILLDVPFVGLTATATK 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAA------SVKQDDIMADLRKLTNFENQFEG 232
V DI SL +RDPN+ FDR NL+ S D+ + ++ K +
Sbjct: 174 KVRMDIINSLKMRDPNVFIGSFDRKNLFYGVKSFIRNSQFMDEFVGEISKFVASSD---- 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E++ L GI+ YH ++ R+E H +F++D + V+VAT AFG
Sbjct: 230 STIIYCTTIKDVEQIYKSLQEAGIKAGIYHGQMANSAREESHRIFIRDEVHVMVATIAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP++R VIHYG PK L +YYQE GR GRDG++SVC+ +Y DF K + F
Sbjct: 290 MGIDKPNIRHVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYNRGDFMKAD--FYCGEA 347
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + + Y TCRRK+LL +F + DKC CDNC
Sbjct: 348 TGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFG--------EKFESDKCGNCDNC 395
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 159/275 (57%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +G+ I+YC ++ +KV + L ++
Sbjct: 201 IHIASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGAGIVYCISRKTVDKVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R F++D ++++VAT AFGMGI+KPDVR VIHY P++L
Sbjct: 258 GINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGN 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 160/275 (58%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +GS I+YC ++ ++V + L ++
Sbjct: 201 IHIASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGSGIVYCISRKTVDQVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R + F++D ++++VAT AFGMGI+KPDVR V+HY P++L
Sbjct: 258 GINALPYHAGMEDRERSQNQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|365961574|ref|YP_004943141.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
gi|365738255|gb|AEW87348.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
Length = 731
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 155/258 (60%), Gaps = 10/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I +AIDEAHC+S+WGHDFRP YR L + L ++PI+ +TATATP V +DI +L +
Sbjct: 137 KISFVAIDEAHCISEWGHDFRPEYRNLRNIIRALGEIPIIGLTATATPKVQEDILKNLEM 196
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D N+ F+RPNL+ K ++ AD+ + F Q +G S +IYC ++ E++ +
Sbjct: 197 SDANVFKASFNRPNLFYEVRTKTKNVEADIIR---FIKQHKGKSGVIYCLSRKKVEEIAE 253
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR VIH+ P
Sbjct: 254 VLKVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIP 313
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K L +YYQE GRAGRDG C +Y D K M +P QE +++ V
Sbjct: 314 KSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMAGKPIAE----QEVGFALLQEV 369
Query: 368 EKYLELRTCRRKYLLNHF 385
Y E RRK+LL++F
Sbjct: 370 VSYAETSMSRRKFLLHYF 387
>gi|375149593|ref|YP_005012034.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
gi|361063639|gb|AEW02631.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
Length = 763
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 166/283 (58%), Gaps = 17/283 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDDICTSLM 189
++ A+DEAHC+S+WGHDFRP YR L E+ + PD+P++A+TATATP V DI +L
Sbjct: 167 KLSFFAVDEAHCISEWGHDFRPEYRRLREMMTQINPDIPVIALTATATPKVQSDIIKNLA 226
Query: 190 LRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L+DP I + F+RPNLY + +K+D ++ + F +G S IIY + E+
Sbjct: 227 LKDPEIYISSFNRPNLYYEIQPKIKKDQT---IKNIVRFIVSMKGKSGIIYTLNRKTTEE 283
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ D+L NGI+ YHA + K R E LF+ + ++V+VAT AFGMGIDKPD+R VIH+
Sbjct: 284 LADMLMANGIKAVAYHAGLDSKLRAERQDLFLNEDVQVIVATIAFGMGIDKPDIRFVIHF 343
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMK 365
PK + YYQE GRAGRDGL C +Y D +K +++ L++ E+ ++
Sbjct: 344 NIPKSIENYYQETGRAGRDGLEGKCILYYSHKDVSKLEHLMRDKPLSEREV---GAQLIS 400
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y E CRRK L+++F E P CDNC H
Sbjct: 401 ETVAYSESGVCRRKILMSYFG------EEYSEPNCGQCDNCLH 437
>gi|224025973|ref|ZP_03644339.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
gi|224019209|gb|EEF77207.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
Length = 727
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/284 (43%), Positives = 158/284 (55%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLKHV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVKMDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + F+RPNLY K ++ D+ K +N+ E S IIYC ++
Sbjct: 190 QKNLGMTDAVEFKSSFNRPNLYYEVRAKTANVDRDIIKFIR-QNE-EKSGIIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ +VL NGI+ RPYHA + R F+K+ I V+VAT AFGMGIDKPDVR VI
Sbjct: 248 EELAEVLQANGIKARPYHAGMDSATRSANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 308 HYDVPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVSE--QEIGKQLL 365
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T D C CDNC
Sbjct: 366 LETAAYAESSVCRRKILLHYF-GEEYT-------EDNCGNCDNC 401
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 159/275 (57%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +G+ I+YC ++ +KV + L ++
Sbjct: 201 IHIASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGAGIVYCISRKTVDKVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R F++D ++++VAT AFGMGI+KPDVR VIHY P++L
Sbjct: 258 GINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSRVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 159/275 (57%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +G+ I+YC ++ +KV + L ++
Sbjct: 201 IHIASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGAGIVYCISRKTVDKVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R F++D ++++VAT AFGMGI+KPDVR VIHY P++L
Sbjct: 258 GINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSRVLGYF-------GESFAGNCGNCDNCRNG 404
>gi|38230500|gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
Length = 772
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 172/300 (57%), Gaps = 23/300 (7%)
Query: 125 FLSRIPRI------VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
F+S++ +I LIAIDEAHC+S WGHDFRPSYR LS LR LPDVP+LA+TATA P
Sbjct: 142 FMSKLTKIHTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAP 201
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQ--DDIMADLRKLTNFENQFEGSTII 236
V +D+ SL L+DP ++ + F+RPN+Y K DD ADL + ++ + I+
Sbjct: 202 KVQNDVIESLCLQDPLVLKSSFNRPNIYYEVRYKDLLDDAYADLPSV--LKSCGDVCAIV 259
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC + C+ + LS+NGI + YHA ++ K R + ++ I+VVVAT AFGMGID
Sbjct: 260 YCLERATCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGID 319
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--------NNMIFQ 348
+ DVR V H+ PK + ++YQE GRAGRD L S +Y D K N Q
Sbjct: 320 RKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSKSLLYYGVDDRKKMEFILRNAENKKLQ 379
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ + E+ + S T + +Y E CRRK +L F G V+ + K CD C+H
Sbjct: 380 SSSSGGELSKKSLTDFNLMIEYCEGAGCRRKKILESF-GEQVSATLCK----KSCDACKH 434
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 167/302 (55%), Gaps = 19/302 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D L +++ I AIDEAHCVS+WGHDFRP YR + LR P++P
Sbjct: 127 RLLSERFLPFMD---LVRAQVG-ISGFAIDEAHCVSEWGHDFRPEYRQMQLLRQRYPEIP 182
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
++A+TATAT V DI L LRDP I F+RPNLY K +L KL
Sbjct: 183 MMALTATATDRVRQDITQQLALRDPKIHIASFNRPNLYYEVRQKNKQSYRELVKLIR--- 239
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+ +GS IIYC ++ ++V L R GI PYHA ++ ++R F++D +V+VAT
Sbjct: 240 ESKGSGIIYCLSRRRVDEVAYKLQREGIDAIPYHAGMNDQERSSNQTRFIRDDAQVIVAT 299
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+HY P+++ YYQE GRAGRDG + C F+ D I
Sbjct: 300 IAFGMGINKPDVRFVVHYDLPRNIEGYYQESGRAGRDGEPANCTMFFGYGDIKTIEYIID 359
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
D + Q ++ ++++ Y E CRR L +F + P C CDNC
Sbjct: 360 QK-TDVDEQRIARQQLRQIINYSESTVCRRTIQLGYF---------GERFPGNCENCDNC 409
Query: 407 RH 408
RH
Sbjct: 410 RH 411
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 159/275 (57%), Gaps = 11/275 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+A+DEAHCVS WGHDFRP YR + ++R P VPILA+TATAT V +DI L LRD +
Sbjct: 141 LAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATATQQVREDIIQQLGLRDTS 200
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPNLY Q ++L + +G+ I+YC ++ +KV + L ++
Sbjct: 201 IHIASFNRPNLYYEV---QPKTSKSYQQLYQYIKGQKGAGIVYCISRKTVDKVAEQLQKD 257
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + ++R F++D ++++VAT AFGMGI+KPDVR VIHY P++L
Sbjct: 258 GINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEG 317
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD K +E Q+ ++ +++V Y E
Sbjct: 318 YYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNE-QQKARQQLRQVLDYAEGT 376
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
CRR +L +F ES CDNCR+
Sbjct: 377 ECRRSSVLGYF-------GESFSGNCANCDNCRNG 404
>gi|126661004|ref|ZP_01732090.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
gi|126617703|gb|EAZ88486.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
Length = 710
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + + AIDEAHCVS WGHDFRP YR L +LR P VP+ A+TATAT V DI
Sbjct: 132 FLKQKVGLSAFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPKVPMFALTATATKRVRADI 191
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L L++P + FDRPNLY V+Q + + L NQ EGS IIYC ++
Sbjct: 192 IEQLGLQNPTVHVASFDRPNLYY--EVQQKSRRSYTQLLNYIRNQ-EGSGIIYCLSRKNV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + L ++GI PYHA + +R F++D ++++VAT AFGMGI+KPDVR V+
Sbjct: 249 ETIALRLQQDGIDALPYHAGMYDDERATNQTRFIRDDVRIIVATIAFGMGINKPDVRFVV 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY P++L +YYQE GRAGRDG + C F+ D + + +++ E Q + +
Sbjct: 309 HYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDLKRLEYLIDQKIDEKE-QRVGRQQL 367
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++V Y E CRR +L +F Q KC CDNC+H
Sbjct: 368 RQVVDYAEGTECRRSIVLRYF---------GQQYKGKCDNCDNCKH 404
>gi|282878161|ref|ZP_06286958.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
gi|281299739|gb|EFA92111.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
Length = 725
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 158/288 (54%), Gaps = 15/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL + +I AIDEAHC+S+WGHDFRP YR + + D P++A+TATAT V
Sbjct: 129 IEFLKTV-KISFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGDAPVIALTATATDKVRT 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + D + F+RPNLY K DI R++ F Q EG S IIYC ++
Sbjct: 188 DIKRSLGIADAREFKSSFNRPNLYYEVRQKASDID---RQIIMFIRQHEGKSGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEELSEVLKANNIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG +C FY D K + Q+ +
Sbjct: 305 FVIHYDIPKSLEGYYQETGRAGRDGGEGICVAFYARKDLKKLEKFMEGKPVAE--QDIGR 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD-KCCDNCRH 408
+++ Y E CRRK LL++F ES P+ CDNC H
Sbjct: 363 QLLQETAAYAESSVCRRKMLLHYF-------GESYTQPNCHSCDNCLH 403
>gi|224026746|ref|ZP_03645112.1| hypothetical protein BACCOPRO_03503 [Bacteroides coprophilus DSM
18228]
gi|224019982|gb|EEF77980.1| hypothetical protein BACCOPRO_03503 [Bacteroides coprophilus DSM
18228]
Length = 608
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 168/301 (55%), Gaps = 29/301 (9%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSEL L D+ R+ L AIDEAHC+SQWGHDFRP Y L LR P+VP
Sbjct: 113 RLLSELNFLLKDI---------RVSLFAIDEAHCISQWGHDFRPEYTQLKVLRQQFPNVP 163
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNF 226
I+A+TATA + DI L +R+P + + FDRPNL L +Q + +R + F
Sbjct: 164 IVALTATADKITRQDIVQQLAMRNPQVFISSFDRPNLSLEVKRGYQQKE---KIRSILQF 220
Query: 227 ENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVV 285
++ G S IIYC ++ EKV ++L +G+ YHA +S R F+ D +++V
Sbjct: 221 IDRHPGESGIIYCMSRNTTEKVAEMLEDHGLHVAVYHAGLSTAARDAAQDDFINDRVQIV 280
Query: 286 VATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNM 345
AT AFGMGIDK +VR VIHY PK + ++YQEIGRAGRDGL S FY D +
Sbjct: 281 CATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSFGDI----V 336
Query: 346 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDN 405
+ +S QE + + R+++Y E CRR+ LLN+F G ++ D C N
Sbjct: 337 LLSKFAAESNQQEINLEKLNRMQQYAETDICRRRILLNYF-GETM---------DHDCGN 386
Query: 406 C 406
C
Sbjct: 387 C 387
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/274 (42%), Positives = 158/274 (57%), Gaps = 15/274 (5%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
AIDEAHCVS+WGHDFRP YR L +L+ P VP++A+TATAT V DI L L DP
Sbjct: 147 FAIDEAHCVSEWGHDFRPEYRQLFQLKQQFPQVPVMALTATATERVRQDIIQQLRLNDPQ 206
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
+ +GF+R NLY + K L KL Q G+ IIYC ++ ++ L ++
Sbjct: 207 VFVSGFNRQNLYYEVTPKTKQSYDHLLKLVK---QQSGAGIIYCLSRKRVNEIAFRLKQD 263
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA +S K+R+ F++D ++++VAT AFGMGI+KPDVR VIHY P+ + +
Sbjct: 264 GISALPYHAGLSAKERQGNQEQFIRDDVRIIVATIAFGMGINKPDVRFVIHYDLPRTIES 323
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQE GRAGRDG + C F+ AD + ++ E Q ++ ++ V Y E
Sbjct: 324 YYQESGRAGRDGDPANCTVFFSYADVATVEYLISQKPDEQE-QRIARQQLRHVINYAESA 382
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
CRRK L++F G S P C CDNC
Sbjct: 383 VCRRKIQLSYF-GESF--------PGNCQNCDNC 407
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 173/319 (54%), Gaps = 28/319 (8%)
Query: 101 GHDFRPSYRCL--SELRLPLPDVPILFLS------RIPRIVLIAIDEAHCVSQWGHDFRP 152
G + R +R L E RL L L R + IAIDEAHC+S+WGHDFRP
Sbjct: 95 GDEARARFRGLHRGEFRLLYAAPERLMLPGFVDNLRAWNVTQIAIDEAHCISEWGHDFRP 154
Query: 153 SYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNL-YLAASV 211
YR L++LR LPDVP++A+TATAT V DI L LRDP F+RPNL Y
Sbjct: 155 EYRQLADLRETLPDVPMMALTATATERVRADIIERLRLRDPRCYTASFNRPNLTYRVVPR 214
Query: 212 KQ--DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQ 269
Q D ++A LR S IIYC ++ E V + L+ + I +PYHA ++ ++
Sbjct: 215 AQPYDQVLAFLRSRPG------ESGIIYCSSRKATESVAERLADDRISAKPYHAGLTAEE 268
Query: 270 RKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSS 329
R LF++D ++V+ AT AFGMGI+KP+VR V+HY PK++ YYQE GRAGRDGL
Sbjct: 269 RGRHQELFLRDEVRVICATIAFGMGINKPNVRFVLHYDLPKNIEGYYQETGRAGRDGLPG 328
Query: 330 VCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSS 389
C + AD K + D E + ++ ++++ + E CRR LL +F
Sbjct: 329 ECVLLFSAADVVKQTSFIEEK-TDPEERRIARAQLQQMVHFAESSACRRVELLGYFG--- 384
Query: 390 VTVAESQVPPDKC--CDNC 406
+ P + C CDNC
Sbjct: 385 -----EEWPDENCGGCDNC 398
>gi|225444694|ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
vinifera]
Length = 730
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 174/304 (57%), Gaps = 31/304 (10%)
Query: 125 FLSRIPRI------VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
F+SR+ +I LIAIDEAHC+S WGHDFRPSYR LS LR LPDVPILA+TATA P
Sbjct: 144 FMSRLTKIHARGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPILALTATAVP 203
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQ--DDIMADLRKLTNFENQFEGSTII 236
V D+ SL L++P ++ + F+RPN+Y K DD+ ADL KL G I+
Sbjct: 204 KVQKDVIESLCLQNPLVLKSSFNRPNIYYEVRYKDLLDDVYADLSKLLKSCGNVCG--IV 261
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC + C+++ LS+NGI + YHA ++ K R + ++ I+VVVAT AFGMGID
Sbjct: 262 YCLERTTCDELSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGID 321
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE- 355
+ DVR V H+ PK + A+YQE GRAGRD L S +Y D + I L+++E
Sbjct: 322 RKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFI----LSNAES 377
Query: 356 -----------IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCD 404
+ + S + +Y E +CRRK +L +F G V + + K CD
Sbjct: 378 KKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENF-GEQVAASICR----KSCD 432
Query: 405 NCRH 408
C+H
Sbjct: 433 ACKH 436
>gi|147919945|ref|YP_686301.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
gi|110621697|emb|CAJ36975.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
Length = 605
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 160/289 (55%), Gaps = 10/289 (3%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL ++ + LIAIDEAHC+S WGH FRP YR LS L+ P VP++A+TA+A P
Sbjct: 126 DSCLQFLEKLD-VKLIAIDEAHCISMWGHQFRPDYRRLSLLKSKFPKVPMIALTASAIPE 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCP 239
V +DI + L L P F+R NL K+D A + L+ S I+YC
Sbjct: 185 VREDIASQLKLVSPKKYLGSFNRINLRYEVREKKD---ATAQILSYIARNRGKSGIVYCL 241
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
+ E++ + L R GI+ PYHA + R FV+D ++VV AT AFGMGIDKPD
Sbjct: 242 ARKTTEELAEKLRRAGIKALPYHADLPDTVRSATQEKFVRDDVEVVCATVAFGMGIDKPD 301
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK+L AYYQE GRAGRDG +S C FY AD K + + D +
Sbjct: 302 VRYVIHYDMPKNLEAYYQETGRAGRDGEASDCIMFYSPADALKMRGLLEKEYTDYHLSRV 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ + + + E R CRRKYLL++F E P CDNC H
Sbjct: 362 AMKKWQAMRDFCETRLCRRKYLLSYFG------EEYDDPACDGCDNCLH 404
>gi|150025301|ref|YP_001296127.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
gi|149771842|emb|CAL43316.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
Length = 731
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 155/266 (58%), Gaps = 11/266 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL + +I +AIDEAHC+S+WGHDFRP YR L + L DVPI+ +TATATP V +
Sbjct: 130 VTFLQK-EKISFVAIDEAHCISEWGHDFRPEYRNLKNIIKLLGDVPIIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + + N F+RPNLY K ++ +D+ F Q +G S IIYC ++
Sbjct: 189 DILKNLDMANANTFKASFNRPNLYYEVRTKTKNVESDI---IRFIKQHKGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVEAIAQVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 306 FVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAE----QEV 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 362 GFALLQEVVAYAETSMSRRKFLLHYF 387
>gi|440801622|gb|ELR22632.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1067
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 158/286 (55%), Gaps = 37/286 (12%)
Query: 136 AIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNI 195
AIDEAHCVS+WGHDFR YR + ++R +P VP++AVT TAT V DI SL LR P I
Sbjct: 418 AIDEAHCVSEWGHDFRREYREMGKVREWIPSVPVMAVTGTATGSVESDIIASLALRHPVI 477
Query: 196 INTGFDRPNLYLAASVKQDDIMADLRKL-------------------TNFEN--QFEGST 234
+ F RPNL+ + ++K D ADL+KL T + Q + S
Sbjct: 478 AKSSFARPNLFFSVAMKSADTSADLKKLLFPSSSSSSSTTSSSSSWITTRRSPLQLQESV 537
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
IIYC T E++ ++ G++ YHA++ R+E+H FV D ++V+VAT AFGMG
Sbjct: 538 IIYCFTIKETEQIASLVQAMGVRAEVYHANLGPSVREEVHKKFVTDQVEVIVATVAFGMG 597
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
IDKPDVR +IH+G PK L AYYQ+ GRAGRDG+++ C+ Y D T + S
Sbjct: 598 IDKPDVRKIIHFGPPKSLEAYYQQAGRAGRDGVAASCHLLYAPVDLTGYRFL-------S 650
Query: 355 EIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD 400
Q M V Y CR+++LL +F + PPD
Sbjct: 651 GGQADRLKMGSAVAAYASTTACRQQHLLQYF---------GEQPPD 687
>gi|325268722|ref|ZP_08135351.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
gi|324988966|gb|EGC20920.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
Length = 727
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 158/289 (54%), Gaps = 15/289 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V
Sbjct: 129 IAFLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRHAIEAIGVAPVIALTATATDKVRT 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + D + F+RPNLY K+ D D R++ F Q G S IIYC ++
Sbjct: 188 DIVRSLGIEDCVEFKSSFNRPNLYYEVRAKKSDDDTD-RQIIKFIKQHAGKSGIIYCLSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL N I+ PYHA + + R + F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 247 KKVEELAAVLQANDIKAAPYHAGLDSETRSKTQDDFLMEDLDVIVATIAFGMGIDKPDVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG +C FY D K + Q+ +
Sbjct: 307 FVIHYDIPKSLEGYYQETGRAGRDGEEGICIVFYSKKDLNKLEKFMEGKPVAE--QDIGR 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+++ E Y E CRRK LL++F + P D C CDNC H
Sbjct: 365 QLLQETEAYAESSVCRRKMLLHYFG--------EEYPKDNCGMCDNCLH 405
>gi|237719061|ref|ZP_04549542.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|293369500|ref|ZP_06616079.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|299148144|ref|ZP_07041206.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|336415756|ref|ZP_08596095.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423292370|ref|ZP_17270948.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|229451440|gb|EEO57231.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|292635385|gb|EFF53898.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|298512905|gb|EFI36792.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|335940635|gb|EGN02502.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392661779|gb|EIY55352.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 726
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 401
>gi|383114099|ref|ZP_09934864.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|423294544|ref|ZP_17272671.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|313694193|gb|EFS31028.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|392675735|gb|EIY69176.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 726
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 401
>gi|119943986|ref|YP_941666.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
gi|119862590|gb|ABM02067.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
Length = 602
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 171/298 (57%), Gaps = 28/298 (9%)
Query: 115 RLPLPDVPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV 172
RL PD FLSR+ I L AIDEAHC+SQWGHDFRP Y L +L+ PD+P++A+
Sbjct: 121 RLLRPD----FLSRLDNLPINLFAIDEAHCISQWGHDFRPEYALLGQLKQRFPDIPLVAL 176
Query: 173 TATATPVVIDDICTSLMLRDPNIINTGFDRPNL-YLAASVKQDDIMADLRKLTNFENQFE 231
TATA DI L DP I FDRPN+ YL + L +L N+ ++ +
Sbjct: 177 TATADYATQQDILARLQFNDPLIAIHSFDRPNIEYLLI-----EKYRPLNQLANYLDEHK 231
Query: 232 G-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCA 290
S IIYC ++ E++ + L G+ R YHA + +++R+ + LF+KD + +VVAT A
Sbjct: 232 NESGIIYCTSRRRTEELAEKLRVKGLSVRCYHAGMMIEERQSVQDLFIKDKVDIVVATVA 291
Query: 291 FGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN 350
FGMGIDKP+VR V+HY PK++ +YYQE GRAGRDGL + FY AD + + + N
Sbjct: 292 FGMGIDKPNVRFVVHYEIPKNIESYYQETGRAGRDGLPAQAMLFYDPADAGRVRSMLEKN 351
Query: 351 LNDSE--IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
N+ + I+ H M + E +TCRR+ LLN+F S K C NC
Sbjct: 352 TNEQQQRIELHKLNTMV---AFAEAQTCRRQVLLNYFGEYS----------HKSCGNC 396
>gi|160882388|ref|ZP_02063391.1| hypothetical protein BACOVA_00337 [Bacteroides ovatus ATCC 8483]
gi|156112201|gb|EDO13946.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
Length = 749
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 156 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 215
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 216 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKKVEEL 273
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 274 AEILQANGINARPYHAGMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 333
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 334 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 391
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 392 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 424
>gi|198276172|ref|ZP_03208703.1| hypothetical protein BACPLE_02361 [Bacteroides plebeius DSM 17135]
gi|198270984|gb|EDY95254.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 727
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 161/286 (56%), Gaps = 19/286 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLRHV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVKMDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D + F+RPNLY K ++ D+ K F Q EG S IIYC ++
Sbjct: 190 QKNLGMMDATEFRSSFNRPNLYYEVRAKSANVDKDIIK---FIKQNEGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ ++L NGI+ R YHA + R F+K+ I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELTEILLANGIKARAYHAGMDSATRNGNQDAFLKEDIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSKT 362
IHY PK L YYQE GRAGRDG C TFY D K Q +++ EI +
Sbjct: 307 IHYDVPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPISEQEI---GRQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+++ Y E CRRK LL++F G T D C CDNC
Sbjct: 364 LLQETAAYAESSVCRRKILLHYF-GEEYT-------EDNCGNCDNC 401
>gi|298480171|ref|ZP_06998369.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273452|gb|EFI15015.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 726
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 401
>gi|153809072|ref|ZP_01961740.1| hypothetical protein BACCAC_03380 [Bacteroides caccae ATCC 43185]
gi|423216745|ref|ZP_17203241.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149128405|gb|EDM19624.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392629275|gb|EIY23282.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 726
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 172/329 (52%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S I+YC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIVYCLSRKRVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + ++V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSLTRTKNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F G T + C CDNC + E EL V
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNCLNPKKQVEAQELLCAVIEA 420
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 421 IIAVKENFKADYIIDILQGRETSEVQAHL 449
>gi|255690572|ref|ZP_05414247.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|423301599|ref|ZP_17279622.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|260624034|gb|EEX46905.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|408471592|gb|EKJ90123.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 726
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKRVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSVTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 401
>gi|423211952|ref|ZP_17198481.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295088062|emb|CBK69585.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens XB1A]
gi|392695316|gb|EIY88539.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 726
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 401
>gi|189462225|ref|ZP_03011010.1| hypothetical protein BACCOP_02908 [Bacteroides coprocola DSM 17136]
gi|189431078|gb|EDV00063.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 727
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 161/285 (56%), Gaps = 17/285 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLKHV-KISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVKMDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + F+RPNLY K +++ D+ + + E S IIYC ++
Sbjct: 190 QKNLGMVGATEFKSSFNRPNLYYEVRPKTNNVDKDIIRF--IKQNPEKSGIIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI+ RPYHA + R F+K+ I+V+VAT AFGMGIDKPDVR VI
Sbjct: 248 EELAEILQANGIKARPYHAGMDSATRNANQDAFLKEDIEVIVATIAFGMGIDKPDVRFVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSKTM 363
HY PK L YYQE GRAGRDG +C TFY D K Q +++ EI K +
Sbjct: 308 HYDIPKSLEGYYQETGRAGRDGGEGMCITFYSNKDLQKLEKFMQGKPISEQEI---GKQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y E CRRK LL++F G T D C CDNC
Sbjct: 365 LLETAAYAESSLCRRKILLHYF-GEEYT-------EDNCGNCDNC 401
>gi|262408128|ref|ZP_06084675.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|294645124|ref|ZP_06722849.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294809724|ref|ZP_06768411.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|336403758|ref|ZP_08584467.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|345508918|ref|ZP_08788536.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|229447212|gb|EEO53003.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|262353680|gb|EEZ02773.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|292639548|gb|EFF57841.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294443058|gb|EFG11838.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|335945112|gb|EGN06928.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
Length = 726
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 155/281 (55%), Gaps = 14/281 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRAKTANIDRDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI RPYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARPYHAGMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 401
>gi|427712781|ref|YP_007061405.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427376910|gb|AFY60862.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 732
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 166/294 (56%), Gaps = 21/294 (7%)
Query: 125 FLSRIPRIVLIA---IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
L+ I + V IA +DEAHCVS+WGHDFRP YR LS LR P +P++A+TATAT V
Sbjct: 124 LLANIHQTVGIASFVVDEAHCVSEWGHDFRPDYRQLSRLRELFPSIPMMALTATATHCVR 183
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI L L+ P I F+RPNLY +++ L +LT + + EGS IIYC ++
Sbjct: 184 ADITEQLSLKQPFIHVASFNRPNLYYEV-IEKSRGKVSLSELTRYIKKTEGSGIIYCMSR 242
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
EK+ L+ NGI PYHA ++ R + F++D ++++VAT AFGMGI+KPDVR
Sbjct: 243 KNVEKLASELNENGISALPYHAGLNNDTRTDHQTRFIRDDVQIMVATVAFGMGINKPDVR 302
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ----PNLND--SE 355
VIHY P+ + YYQE GR GRDG + C F+ D + + Q P N+ +
Sbjct: 303 FVIHYDLPQTIEGYYQESGRGGRDGEPARCTLFFSPGDIKQADWFIQNKVHPETNEPLED 362
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
Q ++ ++++ Y + CRR LL +F + P C CDNCR
Sbjct: 363 EQRIARQQLRQIAAYADSTLCRRTTLLGYF---------GEAFPGNCGQCDNCR 407
>gi|374598547|ref|ZP_09671549.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|423323213|ref|ZP_17301055.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
gi|373910017|gb|EHQ41866.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|404609764|gb|EKB09128.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
Length = 731
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 158/264 (59%), Gaps = 11/264 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + ++ +AIDEAHC+S+WGHDFRP YR L + L D+PI+ +TATATP V +DI
Sbjct: 132 FLQEV-KLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRQLGDIPIIGLTATATPKVQEDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + + N+ F+RPNLY K +I +D+ + F Q +G S +IYC ++
Sbjct: 191 LKNLEIPNANVFKASFNRPNLYYEIKPKTKNIESDIIR---FIKQRKGKSGVIYCLSRKK 247
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 248 VEEIANVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYV 307
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 308 IHHDIPKSLESYYQETGRAGRDGGEGWCLAYYSYKDIEKLEKFMAGKPIAE----QEIGI 363
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 364 ALLQEVVAYAETSMSRRKFLLHYF 387
>gi|189463687|ref|ZP_03012472.1| hypothetical protein BACINT_00018 [Bacteroides intestinalis DSM
17393]
gi|189438637|gb|EDV07622.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 727
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 172/332 (51%), Gaps = 20/332 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++I D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVDAEVFKSSFNRPNLYYEVRPKTNNIDRDIIKF--IKNNSEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QV 417
Y E CRRK LL++F + + C CDNC + E EL V
Sbjct: 367 LETAAYAESSVCRRKTLLHYFG--------EEYLEENCGNCDNCLNPKKQVEAQELLCTV 418
Query: 418 PRGGRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 419 IEAILAVKENFKADYIIDIIQGRETTEVQAHL 450
>gi|168036322|ref|XP_001770656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678017|gb|EDQ64480.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 964
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 159/293 (54%), Gaps = 36/293 (12%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATAT--------PVVIDD 183
+ L+A+DEAHCVS+WGHDFR Y+ L LR LP VP +A+TATAT V +D
Sbjct: 146 VSLLAVDEAHCVSEWGHDFRHEYQNLDALRPMLPKVPFVALTATATHNSSGQVLSRVRED 205
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLA-------ASVKQD---DIMADLRKLTNFENQFEGS 233
I S+ L+D + FDRPNL+ A+ KQ+ +I+ D+ K GS
Sbjct: 206 IVQSMNLQDAYTAISSFDRPNLFYGVSGLNRTATFKQELAREILKDVGK--------SGS 257
Query: 234 TIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGM 293
TIIYC T E+V D L + G RPYHA +S R E+H F D +++VVAT AFGM
Sbjct: 258 TIIYCTTIKDVEEVVDALQKEGANARPYHAKMSSTLRTEVHRAFSTDELQIVVATVAFGM 317
Query: 294 GIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND 353
GIDKPD+R VIHYG PK L AYYQE GR GRDG S C+ +Y +DF K + F
Sbjct: 318 GIDKPDIRRVIHYGCPKSLEAYYQESGRCGRDGFPSQCWMYYTRSDFAKRD-FFTAGFTT 376
Query: 354 SEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ ++ + Y CRR LL +F + P + C NC
Sbjct: 377 AVRKQAVLDSYAAAKDYCATVKCRRSILLKYF---------GENPTAENCGNC 420
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 165/294 (56%), Gaps = 9/294 (3%)
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
L+ SR + I IDEAHCVSQWGHDFRP Y+ L +LR P+VP++A+TATAT VI D
Sbjct: 904 LYRSR--KFARIVIDEAHCVSQWGHDFRPDYKTLGQLRSKFPEVPVMALTATATQNVIVD 961
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKV 242
I +L + + + + F+RPNLY K + + + +++ T I+Y ++
Sbjct: 962 IKHNLGMNNCQVFSQSFNRPNLYYEVRPKSSNPVVTQQIAALINSKYPNVTGIVYTISRK 1021
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V LS NGI R YHA I+ ++ E+ + K +KVVVAT AFGMGIDKPDVR
Sbjct: 1022 QAEDVAQKLSDNGITARHYHAAITPTEKVEVQTAWQKGQVKVVVATIAFGMGIDKPDVRY 1081
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIH+G PK L YYQE GRAGRDG S C FY AD + + +E
Sbjct: 1082 VIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKKLIMDGDGSKDQKERQMA 1141
Query: 363 MMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
M+ RV + + + CRR +L +F G T ++ K CDNC+ + E +
Sbjct: 1142 MLNRVTAFCDNKADCRRTEVLRYF-GEDFTPSQCH----KTCDNCQAGLVFEQQ 1190
>gi|325300153|ref|YP_004260070.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324319706|gb|ADY37597.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 727
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 156/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLKHV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVKMDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + F+RPNLY K +I D+ + + E S IIYC ++
Sbjct: 190 QKNLGMTDAVEFKSSFNRPNLYYEVRSKTVNIDKDIIRF--IKQNPEKSGIIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI+ RPYHA + R F+K+ I V+VAT AFGMGIDKPDVR VI
Sbjct: 248 EELAEILQANGIKARPYHAGMDSATRNANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 308 HYDMPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVSE--QEIGKQLL 365
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T D C CDNC
Sbjct: 366 LETAAYAESSLCRRKVLLHYF-GEEYT-------EDNCGNCDNC 401
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 168/295 (56%), Gaps = 13/295 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R + + IDEAHCVSQWGHDFRP Y+ L ++R P VP++A+TATAT VI DI
Sbjct: 949 LHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYPGVPVMALTATATKNVIVDIR 1008
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVK--QDDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + + I + F+RPNLY K + +M + L + + NQ S I+Y ++
Sbjct: 1009 HNLGMDNCQIFSQSFNRPNLYYEVRPKTTNEKVMDAISSLIHSRYANQ---SGIVYTISR 1065
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
EKV + LS NGI R YHA +++ E+ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1066 KNAEKVAESLSGNGITARFYHAGCDPQEKVEVQNSWQRGHVKVVVATIAFGMGIDKPDVR 1125
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH+G PK L YYQE GRAGRDG S C FY AD + + +E
Sbjct: 1126 FVIHHGLPKSLEGYYQETGRAGRDGNPSDCILFYGKADIRVLKKLIADGDGSHDQKERQM 1185
Query: 362 TMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+M+ RV + + ++ CRR +L +F G + A+ + K CDNC+ E +
Sbjct: 1186 SMLNRVTAFCDNKSDCRRTEILRYF-GEDFSAAQCR----KSCDNCKAGLTFEQQ 1235
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 163/279 (58%), Gaps = 5/279 (1%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP Y+ L +LR P VP++A+TATATP V DI +L ++ P ++
Sbjct: 908 IDEAHCVSQWGHDFRPDYKRLCKLREKFPGVPMMALTATATPRVKTDILHALKMKKPQVL 967
Query: 197 NTGFDRPNLYLAASVKQ-DDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRN 254
+ FDR NL KQ ++ ++ KL N +QF+G S I+YC ++ CEKV D LS
Sbjct: 968 TSSFDRSNLMFRVEKKQPSKMIENITKLIN--SQFKGKSGIVYCLSRNECEKVADDLSNA 1025
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI+ PYHA S K+R + ++ KVV AT AFGMGIDK DVR VIHY PK +
Sbjct: 1026 GIKASPYHAGQSDKERSTVQTRWINGQYKVVCATIAFGMGIDKADVRFVIHYSMPKSIEG 1085
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQE GRAGRDG + C ++ D T+ MI + N + + H + V+
Sbjct: 1086 YYQEAGRAGRDGGLAHCVLYFSYQDVTRLRRMIEKNGDNYNATKVHVDNLYGMVQYCDNK 1145
Query: 374 RTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEML 412
CRR +L++F + A + + CDNC+ + +
Sbjct: 1146 ADCRRVIMLSYFGETGYDRAICRRRRETACDNCQSDALF 1184
>gi|256419821|ref|YP_003120474.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
gi|256034729|gb|ACU58273.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
Length = 733
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 178/313 (56%), Gaps = 17/313 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I IA+DEAHC+S+WGHDFRP YR L E+ + D +PI+A+TATATP V DI +L L
Sbjct: 138 ISFIAVDEAHCISEWGHDFRPEYRRLKEMIEQINDSLPIIALTATATPKVQSDIVKNLEL 197
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
RDP + + F+R NLY K+ +R++ F +Q +G S IIY + E++ D
Sbjct: 198 RDPQVFLSSFNRSNLYYEIRPKRKKDQT-IREIVKFIHQHKGKSGIIYTLNRKTTEELAD 256
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L N I+ YHA + R + +F+ + + V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 257 MLVANNIKAVAYHAGLDAGTRAQRQDMFLHEDVDVIVATIAFGMGIDKPDVRFVIHYNIP 316
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVE 368
K L YYQE GRAGRDGL +C FY D K +++ L++ E+ ++
Sbjct: 317 KSLENYYQETGRAGRDGLEGICVCFYSYKDVQKLEHLMRDKPLSEREM---GAQLINETV 373
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVENS 428
Y E CRRK +L++F ESQ + CDNCR+ + E++ R+V+
Sbjct: 374 AYAESSACRRKVILHYF---GEKYEESQC--NNACDNCRNPK----EKIEVKNRVVIVLK 424
Query: 429 EVWMSTEARPGRE 441
+ S E R G E
Sbjct: 425 AI-KSLEERFGTE 436
>gi|224535963|ref|ZP_03676502.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226021|ref|ZP_17212487.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|224522418|gb|EEF91523.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630878|gb|EIY24859.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 727
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 172/332 (51%), Gaps = 20/332 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++I D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMIDAEVFKSSFNRPNLYYEVRPKTNNIDRDIIKF--IKNNSEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QV 417
Y E CRRK LL++F + + C CDNC + E EL V
Sbjct: 367 LETAAYAESSVCRRKTLLHYFG--------EEYMEENCGNCDNCLNPKKQVEAQELLCTV 418
Query: 418 PRGGRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 419 IEAILAVKENFKADYIIDIIQGRETTEVQAHL 450
>gi|225154844|ref|ZP_03723342.1| ATP-dependent DNA helicase RecQ [Diplosphaera colitermitum TAV2]
gi|224804374|gb|EEG22599.1| ATP-dependent DNA helicase RecQ [Diplosphaera colitermitum TAV2]
Length = 611
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 160/282 (56%), Gaps = 16/282 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R + AIDEAHC+S+WGHDFRP YR L+ +R LP+ P++A+TATAT V DI
Sbjct: 127 RAWNVAAFAIDEAHCISEWGHDFRPEYRQLARMRELLPEAPMMALTATATERVRADIIKH 186
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L LRDP + F+R NL K + L+++ +F + E S I+YC ++ ++
Sbjct: 187 LNLRDPAVFVASFNRANLSYRVLPKDEP----LKQIIDFVKKREDESGIVYCASRATAQR 242
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ L+ G RPYHA ++ +R +F++D +K++ AT AFGMGI+KP+VR +IHY
Sbjct: 243 TAESLASRGYSARPYHAGLTADERSTNQEMFLRDDVKIICATIAFGMGINKPNVRWIIHY 302
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ YYQE GRAGRDGL C + D K F + D Q+ ++ ++
Sbjct: 303 DLPKNIEGYYQETGRAGRDGLPGDCLLLFSGGDIAKQTH-FLDEITDPHEQQVARHQLRL 361
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y E CRR+ LL++F Q P D C CDNC
Sbjct: 362 MAHYAESPGCRRRELLDYFG--------EQFPLDNCGACDNC 395
>gi|393789452|ref|ZP_10377573.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
gi|392650900|gb|EIY44566.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
Length = 726
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/329 (40%), Positives = 169/329 (51%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D + + F+RPNLY K +I D+ K N E S IIYC ++ E++
Sbjct: 193 LGMVDAQVFKSSFNRPNLYYEVRPKTTNIDRDIIKF--IRNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR V+HY
Sbjct: 251 AEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVMHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGKCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F G T D C CDNC + E EL V
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EDNCGNCDNCLNPKKQVEAQELLCAVIEA 420
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 421 VIAVKENFKADYIIDILQGRETSEIQAHL 449
>gi|224124876|ref|XP_002319444.1| predicted protein [Populus trichocarpa]
gi|222857820|gb|EEE95367.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 167/285 (58%), Gaps = 25/285 (8%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L A+DEAHC+S+WGHDFR Y+ L +LR L +VP +A+TATAT V DI SL +
Sbjct: 93 ICLFAVDEAHCISEWGHDFRVEYKQLYKLRDVLLEVPFVALTATATEKVRIDIINSLKMN 152
Query: 192 DPNIINTGFDRPNLYLAASVKQ--------DDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
+P + FDR NL+ VK D+++ ++ K + GSTIIYC T
Sbjct: 153 NPYVAVGSFDRKNLFYG--VKHFNRSLQFVDELVQEISKYA----RKAGSTIIYCTTIKD 206
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ L GI+ YH +S K R+E H FV+D + V+VAT AFGMGIDKP++R V
Sbjct: 207 VEQIHKSLKEAGIKTGIYHGQMSSKAREESHRSFVRDELLVMVATIAFGMGIDKPNIRQV 266
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHYG PK + +YYQE GR GRDG+ SVC+ +Y ADF K + +++ + +++
Sbjct: 267 IHYGCPKSIESYYQESGRCGRDGIPSVCWLYYTRADFAKADFYCGGLRTENQRRAVMESL 326
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
M + Y L TCRRK+LL +F + +KC CDNC
Sbjct: 327 MA-AQHYCSLTTCRRKFLLGYFG--------EKFSAEKCGNCDNC 362
>gi|172036703|ref|YP_001803204.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|354554517|ref|ZP_08973821.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
gi|171698157|gb|ACB51138.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|353553326|gb|EHC22718.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
Length = 711
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 163/291 (56%), Gaps = 15/291 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + + AIDEAHCVS WGHDFRP YR L +LR P VP+ A+TATAT V DI
Sbjct: 132 FLRQKVGLSGFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPQVPMFALTATATKRVRADI 191
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L L++P + FDRPNLY Q+ +L N+ EGS IIYC ++
Sbjct: 192 IEQLGLQNPTVHVASFDRPNLYYEV---QEKSRRSYTQLLNYVRSQEGSGIIYCLSRKNV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + L ++GI+ PYHA + +R F++D ++++VAT AFGMGI+KPDVR V+
Sbjct: 249 ETIAFRLQQDGIEALPYHAGMYDDERAVNQTRFIRDDVRIIVATIAFGMGINKPDVRFVV 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY P++L +YYQE GRAGRDG + C F+ D + + +++ E Q + +
Sbjct: 309 HYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDLKRLEYLIDQKIDEKE-QRVGRQQV 367
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
++V Y E CRR +L +F Q KC CDNC + + +E
Sbjct: 368 RQVVDYAEGTECRRSIILRYF---------GQQYKGKCDNCDNCNYPKPIE 409
>gi|120434956|ref|YP_860642.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
gi|117577106|emb|CAL65575.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
Length = 732
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 176/310 (56%), Gaps = 16/310 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I +A+DEAHC+S+WGHDFRP YR L + + D +P++ +TATATP V +DI +L +
Sbjct: 138 IAFLAVDEAHCISEWGHDFRPEYRNLRNILKRIGDNIPVIGLTATATPKVQEDILKNLGI 197
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D F+RPNLY K +I AD+ T F Q +G S IIYC ++ E++
Sbjct: 198 TDAKTFKASFNRPNLYYEVRPKTKNIEADI---TRFVKQNDGKSGIIYCLSRKKVEELAQ 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NGI+ PYHA + K+R + +F+ + I VVVAT AFGMGIDKPDVR VIH+ P
Sbjct: 255 TLQVNGIKAVPYHAGLDAKKRSKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVIHHDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K + +YYQE GRAGRDG C FY D K M +P QE +++ V
Sbjct: 315 KSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAE----QEIGHALLQEV 370
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH--NEMLELEQVPRGGRMVV 425
Y E RRK++L++F G + +E+ D DN R+ ++ E + RMV
Sbjct: 371 VAYAETSVSRRKFILHYF-GEEFS-SETGDGAD-MDDNVRYPKKQVEAKEDLELLLRMVK 427
Query: 426 ENSEVWMSTE 435
E +E++ S E
Sbjct: 428 ETNELYKSKE 437
>gi|393785533|ref|ZP_10373683.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392662288|gb|EIY55852.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 726
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/329 (40%), Positives = 168/329 (51%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D I + F+RPNLY K +I D+ K N E S IIYC ++ E++
Sbjct: 193 LGMVDAQIFKSSFNRPNLYYEVRPKTANIDRDIIKF--IRNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGRCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F + D C CDNC + E EL V
Sbjct: 369 AAYAESSVCRRKTLLHYFG--------EEYLEDNCGNCDNCLNPKKQVEAQELLCAVIEA 420
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 421 IIAVKENFKADYIIDILQGRETSEVQAHL 449
>gi|327402848|ref|YP_004343686.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
gi|327318356|gb|AEA42848.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
Length = 726
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 164/290 (56%), Gaps = 21/290 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL+ +P I AIDEAHC+S+WGHDFRP YR L E+ + DV I+A+TATATP V
Sbjct: 128 IDFLTSVP-ISFFAIDEAHCISEWGHDFRPEYRRLREIFEKISDVAIIALTATATPKVQA 186
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D ++ + F+R NLY KQ+ +++ + Q EG S IIYC ++
Sbjct: 187 DIQKNLNMMDADLFKSSFNRDNLYYEIRAKQNV----EKEIIKYIRQREGKSGIIYCLSR 242
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ ++L NGI YHA + R +F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 243 KKVEETAELLQVNGINALAYHAGLDATTRARHQDMFLMEEVDVIVATIAFGMGIDKPDVR 302
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHS 360
VIH+ PK L +YYQE GRAGRDG C TFY D K Q +++ EI
Sbjct: 303 FVIHHDIPKSLESYYQETGRAGRDGGVGECITFYSYKDIEKLEKFLQGKPVSEQEI---G 359
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCR 407
K ++ + Y E CRRK++L++F + C CDNC+
Sbjct: 360 KQLLSEIVSYSETSVCRRKFILHYFG--------EEFDEQGCHEMCDNCK 401
>gi|423316589|ref|ZP_17294494.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
gi|405583639|gb|EKB57579.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
Length = 733
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I +AIDEAHC+S+WGHDFRP YR L + + DVPI+A+TATATP V DDI
Sbjct: 132 FLKSV-KISFVAIDEAHCISEWGHDFRPEYRNLKNIIEKIADVPIIALTATATPKVQDDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D + + F+RPNLY K I D +++ F NQ +G S IIYC ++
Sbjct: 191 QKTLGMSDAKVYKSSFNRPNLYYEVRPK---INVD-KEIVKFINQRKGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ +L NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFAQLLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKT 362
IHY PK L +YYQE GRAGRDG C FY D K + Q L++ EI
Sbjct: 307 IHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPLSEKEI---GLQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++ V Y E RR+Y+L +F
Sbjct: 364 LLHEVIGYAETSMSRRQYILYYF 386
>gi|67924781|ref|ZP_00518182.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|416405865|ref|ZP_11687987.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
gi|67853376|gb|EAM48734.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|357261215|gb|EHJ10512.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
Length = 710
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 165/289 (57%), Gaps = 11/289 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL++ + AIDEAHCVS WGHDFRP YR L +LR P VP++A+TATAT V +DI
Sbjct: 132 FLNQKIGLSSFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPTVPVVALTATATKRVREDI 191
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L L P++ FDRPNLY K A +L N+ EGS I+YC ++
Sbjct: 192 IEQLGLEKPSVHLASFDRPNLYYEVQQKSRRSYA---QLLNYIRSQEGSGIVYCLSRKNV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E V L ++GI+ PYHA + +R F++D ++++VAT AFGMGI+KPDVR V+
Sbjct: 249 ETVAFRLQQDGIEALPYHAGMYDDERATNQTRFIRDDVRIIVATVAFGMGINKPDVRFVV 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY P++L +YYQE GRAGRDG + C F D K + + + E Q+ ++ +
Sbjct: 309 HYDLPRNLESYYQESGRAGRDGEPANCALFLSFGDLKKIDYLIDQKSSPKE-QKIARQQL 367
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
++V Y E CRR +L +F E+ CDNC++ + +E
Sbjct: 368 RKVVDYAEANECRRTIILRYFGQQHNGNCEN-------CDNCKNPKPIE 409
>gi|406674061|ref|ZP_11081273.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
gi|405584835|gb|EKB58711.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
Length = 733
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 154/263 (58%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I +AIDEAHC+S+WGHDFRP YR L + + DVPI+A+TATATP V DDI
Sbjct: 132 FLKSV-KISFVAIDEAHCISEWGHDFRPEYRNLKNIIEKIADVPIIALTATATPKVQDDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D + + F+RPNLY K I D +++ F NQ +G S IIYC ++
Sbjct: 191 QKTLGMSDAEVYKSSFNRPNLYYEVRPK---INVD-KEIVKFINQRKGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ +L NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFAQLLQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKT 362
IHY PK L +YYQE GRAGRDG C FY D K + Q L++ EI
Sbjct: 307 IHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPLSEKEI---GLQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++ V Y E RR+Y+L +F
Sbjct: 364 LLHEVIGYAETSMSRRQYILYYF 386
>gi|313149548|ref|ZP_07811741.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313138315|gb|EFR55675.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 734
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 171/329 (51%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 141 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 200
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D ++ + F+RPNLY K ++ D+ K +N E S IIYC ++ E++
Sbjct: 201 LGMVDAHVFKSSFNRPNLYYEVRPKTQNVDKDIIKF--IKNNPEKSGIIYCLSRKKVEEL 258
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 259 AEILQANGINARAYHAGMDSATRTQNQDNFLMEKIDVIVATIAFGMGIDKPDVRYVIHYD 318
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 319 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 376
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F G T + C CDNC + E EL V
Sbjct: 377 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNCLNPKKQVEAQELLCAVIET 428
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 429 IIAVKENFKADYIIDVLQGRETSEVQAHL 457
>gi|327312566|ref|YP_004328003.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
gi|326944958|gb|AEA20843.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
Length = 727
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 156/289 (53%), Gaps = 15/289 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL R +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V
Sbjct: 129 IAFL-RSVKISFYAIDEAHCISEWGHDFRPEYRKIRHAIDAIGVAPVIALTATATDKVRT 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + D + F+RPNLY K+ D D R++ F Q G S IIYC ++
Sbjct: 188 DIVRSLGIEDCVEFKSSFNRPNLYYEVRAKKSDDDTD-RQIIKFIKQHAGKSGIIYCLSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL N I+ PYHA + + R F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 247 KKVEELAAVLQANDIKAAPYHAGLDSETRSRTQDDFLMEELDVIVATIAFGMGIDKPDVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG +C FY D K + Q+ +
Sbjct: 307 FVIHYDIPKSLEGYYQETGRAGRDGEEGLCIVFYSKKDLNKLEKFMEGKPVAE--QDIGR 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+++ E Y E CRRK LL++F P D C CDNC H
Sbjct: 365 QLLQETEAYAESSVCRRKMLLHYFG--------EDYPKDNCGMCDNCLH 405
>gi|325855159|ref|ZP_08171782.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
gi|325483896|gb|EGC86840.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
Length = 727
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/289 (42%), Positives = 156/289 (53%), Gaps = 15/289 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL R +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V
Sbjct: 129 IAFL-RSVKISFYAIDEAHCISEWGHDFRPEYRKIRHAIDAIGVAPVIALTATATDKVRT 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + D + F+RPNLY K+ D D R++ F Q G S IIYC ++
Sbjct: 188 DIVRSLGIEDCVEFKSSFNRPNLYYEVRAKKSDDDTD-RQIIKFIKQHAGKSGIIYCLSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL N I+ PYHA + + R F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 247 KKVEELAAVLQANDIKAAPYHAGLDSETRSRTQDDFLMEELDVIVATIAFGMGIDKPDVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG +C FY D K + Q+ +
Sbjct: 307 FVIHYDIPKSLEGYYQETGRAGRDGEEGLCIVFYSKKDLNKLEKFMEGKPVAE--QDIGR 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+++ E Y E CRRK LL++F P D C CDNC H
Sbjct: 365 QLLQETEAYAESSVCRRKMLLHYFG--------EDYPKDNCGMCDNCLH 405
>gi|372209002|ref|ZP_09496804.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium S85]
Length = 734
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 151/261 (57%), Gaps = 5/261 (1%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR L + + DVPI+ +TATATP V +DI
Sbjct: 132 FLKK-QKISFFAIDEAHCISEWGHDFRPEYRNLRRIITRIGDVPIIGLTATATPKVQEDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + N F+RPNL+ K D+ +D+ + + S +IYC ++
Sbjct: 191 IKTLGMTNANTFKASFNRPNLFYEVRPKTKDVTSDIIRF--IRQRLGKSGVIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ L NGI PYHA + K R + +F+ + + V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EEIAQTLQVNGISALPYHAGLDAKTRAKHQDMFLMEDVDVIVATIAFGMGIDKPDVRFVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+ PK L +YYQE GRAGRD C FY D K F N SE QE ++
Sbjct: 309 HHDIPKSLESYYQETGRAGRDDGEGYCLAFYSYKDIEKLEK-FMANKPVSE-QELGHALL 366
Query: 365 KRVEKYLELRTCRRKYLLNHF 385
+ V Y E RR+YLL++F
Sbjct: 367 QEVVGYAETSMSRRRYLLHYF 387
>gi|423280579|ref|ZP_17259491.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|424665170|ref|ZP_18102206.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404575034|gb|EKA79779.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404583786|gb|EKA88459.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 726
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 171/329 (51%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D ++ + F+RPNLY K ++ D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAHVFKSSFNRPNLYYEVRPKTQNVDKDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARAYHAGMDSATRTQNQDNFLMEKIDVIVATIAFGMGIDKPDVRYVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F G T + C CDNC + E EL V
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNCLNPKKQVEAQELLCAVIET 420
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 421 IIAVKENFKADYIIDVLQGRETSEVQAHL 449
>gi|53715360|ref|YP_101352.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60683329|ref|YP_213473.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|265767847|ref|ZP_06095379.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|336412096|ref|ZP_08592554.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|375360137|ref|YP_005112909.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|383119914|ref|ZP_09940651.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|423252209|ref|ZP_17233211.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423252529|ref|ZP_17233460.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|423261243|ref|ZP_17242144.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267768|ref|ZP_17246748.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|423272323|ref|ZP_17251291.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423276779|ref|ZP_17255711.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|423283055|ref|ZP_17261940.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|52218225|dbj|BAD50818.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60494763|emb|CAH09569.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
gi|251944080|gb|EES84599.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|263252519|gb|EEZ24047.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|301164818|emb|CBW24378.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|335939268|gb|EGN01145.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|387774395|gb|EIK36507.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392647821|gb|EIY41518.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392660605|gb|EIY54214.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|392695515|gb|EIY88727.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392695991|gb|EIY89195.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392696027|gb|EIY89229.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|404581329|gb|EKA86028.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 726
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 171/329 (51%), Gaps = 19/329 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +
Sbjct: 133 RSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKN 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D ++ + F+RPNLY K ++ D+ K +N E S IIYC ++ E++
Sbjct: 193 LGMVDAHVFKSSFNRPNLYYEVRPKTQNVDKDIIKF--IKNNPEKSGIIYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 251 AEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLET 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRG 420
Y E CRRK LL++F G T + C CDNC + E EL V
Sbjct: 369 AAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNCLNPKKQVEAQELLCAVIET 420
Query: 421 GRMVVENSEVWMSTEARPGREAFEFLPHL 449
V EN + + GRE E HL
Sbjct: 421 IIAVKENFKADYIIDVLQGRETSEVQAHL 449
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 166/295 (56%), Gaps = 13/295 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R + + IDEAHCVSQWGHDFRP Y+ L ++R P VP++A+TATAT VI DI
Sbjct: 955 LHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYPGVPVMALTATATKNVIVDIR 1014
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQ--DDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + D + F+RPNLY K + + + L +N+ N+ S I+Y ++
Sbjct: 1015 HNLGMDDCQTFSQSFNRPNLYYEVRPKSTGEKTIESIASLIQSNYANK---SGIVYTISR 1071
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
EKV + LS +GI R YHA +++ ++ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1072 KSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQVKVVVATIAFGMGIDKPDVR 1131
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH+G PK L YYQE GRAGRDG S C FY AD + E +E
Sbjct: 1132 FVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADIRVLKKLIADGDGSHEQKERQM 1191
Query: 362 TMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+M+ RV + + ++ CRR +L +F G + AE K CDNC+ E +
Sbjct: 1192 SMLNRVTAFCDNKSDCRRTEILRYF-GEDFSPAECH----KSCDNCKAGLTFEQQ 1241
>gi|429750375|ref|ZP_19283426.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429165304|gb|EKY07364.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 727
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 159/264 (60%), Gaps = 10/264 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDD 183
FL +P I +A+DEAHC+S+WGHDFRP YR + + L ++PI+A+TATATP V +D
Sbjct: 130 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIKTIIERLGTNIPIVALTATATPKVQED 188
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +L + D N+ + F+RPNLY K ++ AD+ + + + S IIYC ++
Sbjct: 189 ILKNLAMTDANVFKSSFNRPNLYYEVRPKTKNVDADIIRFV--KQNPKKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 247 VEELTQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK + +YYQE GRAGRDG C FY D K MI +P QE +
Sbjct: 307 IHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIGQ 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y E + RRK++L++F
Sbjct: 363 ALLQDIVAYAETSSSRRKFILHYF 386
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 166/295 (56%), Gaps = 13/295 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R + + IDEAHCVSQWGHDFRP Y+ L ++R P VP++A+TATAT VI DI
Sbjct: 954 LHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYPGVPVMALTATATKNVIVDIR 1013
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQ--DDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + D + F+RPNLY K + + + L +N+ N+ S I+Y ++
Sbjct: 1014 HNLGMDDCQTFSQSFNRPNLYYEVRPKSTGEKTIESIASLIQSNYANK---SGIVYTISR 1070
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
EKV + LS +GI R YHA +++ ++ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1071 KSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQVKVVVATIAFGMGIDKPDVR 1130
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH+G PK L YYQE GRAGRDG S C FY AD + E +E
Sbjct: 1131 FVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADIRVLKKLIADGDGSHEQKERQM 1190
Query: 362 TMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+M+ RV + + ++ CRR +L +F G + AE K CDNC+ E +
Sbjct: 1191 SMLNRVTAFCDNKSDCRRTEILRYF-GEDFSPAECH----KSCDNCKAGLTFEQQ 1240
>gi|257464903|ref|ZP_05629274.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor 202]
gi|257450563|gb|EEV24606.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor 202]
Length = 604
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 162/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P VP++A+TATA P DI L L
Sbjct: 133 KISLIAVDEAHCVSQWGHDFRPEYTLLGGLRSAFPKVPMMALTATADPTTRHDIIHHLRL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+DP+ FDRPN+ K + +L F + +G S I+YC ++ E++ +
Sbjct: 193 QDPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFIAKQQGKSGIVYCNSRKKVEEITE 248
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS G+ YHA ++++QR+ + F +D I+VVVAT AFGMGI+K +VR V H+ P
Sbjct: 249 KLSARGVSVMGYHAGMTIQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVAHFDLP 308
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P I++H ++ +
Sbjct: 309 RSIESYYQETGRAGRDDLPSEAILFYDPADYAWLQKVLLEEPESEQRNIKQHK---LQAI 365
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 366 SAFAESQTCRRLVLLNYF-------GESKQEPCKNCDIC 397
>gi|427385455|ref|ZP_18881762.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425727099|gb|EKU89960.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 727
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 168/325 (51%), Gaps = 19/325 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI +L +
Sbjct: 138 ISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVQHDIQKNLGMV 197
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
D + + F+RPNLY K +++ D+ K +N E S IIYC ++ E++ ++L
Sbjct: 198 DAEVFKSSFNRPNLYYEVRPKTNNVDRDIIKF--IKNNQEKSGIIYCLSRKKVEELAEIL 255
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY PK
Sbjct: 256 QANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRFVIHYDIPKS 315
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQE GRAGRDG C TFY D K Q QE K ++ Y
Sbjct: 316 LEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLLLETAAYA 373
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC----RHNEMLELE-QVPRGGRMV 424
E CRRK LL++F + + C CDNC + E EL V V
Sbjct: 374 ESSVCRRKTLLHYFG--------EEYMEENCGNCDNCLNPKKQVEAQELLCTVIEAILAV 425
Query: 425 VENSEVWMSTEARPGREAFEFLPHL 449
EN + + GRE E HL
Sbjct: 426 KENFKADYIIDIIQGRETTEVQAHL 450
>gi|319900082|ref|YP_004159810.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
gi|319415113|gb|ADV42224.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
Length = 727
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 156/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVDARVFKSSFNRPNLYYEVRPKTANVDRDIIKF--IKNNSEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 367 LETAAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 402
>gi|218245896|ref|YP_002371267.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
gi|218166374|gb|ACK65111.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
Length = 709
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 169/305 (55%), Gaps = 15/305 (4%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L++ P D FL+ + AIDEAHCVS+WGHDFRP YR L +LR P VP
Sbjct: 119 RLLNDKFTPFLD----FLAEKIGVSFFAIDEAHCVSEWGHDFRPEYRQLKQLRQRYPQVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+LA+TATAT V +DI L L+ P I T F+RPNL K+ KL ++
Sbjct: 175 MLALTATATKRVREDIIHQLALKQPGIHITSFNRPNLDYDVQFKE---RRSYNKLLSYIR 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
Q +GS I+YC ++ + + L +GI+ PYHA ++ + R F++D ++V+VAT
Sbjct: 232 QQKGSGIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRDDVQVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIHY P++L YYQE GRAGRDG + C F+ +D K +
Sbjct: 292 IAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDLKKIEYLID 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
E Q+ ++ +++V Y E CRR +L +F E CDNCR
Sbjct: 352 QKSTPQE-QKIARQQLRQVVDYAEGTECRRTIVLRYF-------GERFAGNCGKCDNCRD 403
Query: 409 NEMLE 413
+ LE
Sbjct: 404 PKPLE 408
>gi|387132182|ref|YP_006298154.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
gi|386375030|gb|AFJ09244.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
Length = 727
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 163/292 (55%), Gaps = 19/292 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI SL +
Sbjct: 136 KVSFYAIDEAHCISEWGHDFRPEYRKIRQAVDQIGKAPIIALTATATDKVRTDIVKSLGI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + F+RPNLY K+++ + R++ F Q G S IIYC ++ E++
Sbjct: 196 EDCAEFKSSFNRPNLYYEVRPKKNEEDTN-RQIIKFIKQNLGKSGIIYCLSRKKVEELAA 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 255 VLQANEIKAEPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K L YYQE GRAGRDG C FY D K N M +P Q+ + +++
Sbjct: 315 KSLEGYYQETGRAGRDGEEGKCIVFYSKNDLKKLENFMEGKPVAE----QDIGRQLLQET 370
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH-NEMLELEQ 416
E Y E CRRK LL++F + P D C CDNC H E +E +Q
Sbjct: 371 ETYAESSVCRRKLLLHYFG--------EEYPKDNCGMCDNCLHPKEKIEAQQ 414
>gi|399927001|ref|ZP_10784359.1| ATP-dependent DNA helicase RecQ1 [Myroides injenensis M09-0166]
Length = 731
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 158/266 (59%), Gaps = 11/266 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL + ++ +AIDEAHC+S+WGHDFRP YR L + L D+P++ +TATATP V +
Sbjct: 130 VSFLKEV-KLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRQLGDIPMIGLTATATPKVQE 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N+ F+RPNL+ K +I +D+ + F Q G S +IYC ++
Sbjct: 189 DILKNLEIPDANVFKASFNRPNLFYEIRPKTKNIESDIIR---FIKQNAGKSGVIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KKVEEIANVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 306 YVIHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMAGKPIAE----QEI 361
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 362 GFALLQEVVGYAETSMSRRKFLLHYF 387
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 166/291 (57%), Gaps = 15/291 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I IDEAHCVSQWGHDFRP Y+ L ++R P VP++A+TATAT VI DI +L +
Sbjct: 206 KLARIVIDEAHCVSQWGHDFRPDYKTLGQVRQRYPGVPVMALTATATQNVIVDIRHNLGM 265
Query: 191 RDPNIINTGFDRPNLYLAASVKQD-----DIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
+ + F+RPNLY K D +A L K + + NQ S I+Y ++ E
Sbjct: 266 DNCQTFSQSFNRPNLYYEVRGKTTNAKCMDEIASLIK-SKYANQ---SGIVYTVSRKNAE 321
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
KV + LS GI R YHA + +++ E+ + + IK++VAT AFGMGIDKPDVR VIH
Sbjct: 322 KVAESLSDQGITARHYHAGVDPQEKAEVQIAWQQGQIKIIVATIAFGMGIDKPDVRFVIH 381
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
+G PK L YYQE GRAGRDG S C FY D + + E +E +M+
Sbjct: 382 HGLPKSLEGYYQETGRAGRDGDPSDCILFYGKQDIRILKKLIAEGDGNKEQKERQMSMLN 441
Query: 366 RVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
RV + + ++ CRR +L +F G + A+ K CDNC+ + E +
Sbjct: 442 RVTAFCDNKSDCRRAEILRYF-GEDFSAAQC----GKTCDNCKAGLIFEQQ 487
>gi|420158748|ref|ZP_14665562.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
gi|394763235|gb|EJF45355.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
Length = 727
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 160/265 (60%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVID 182
FL +P I +A+DEAHC+S+WGHDFRP YR + + RL ++PI+A+TATATP V +
Sbjct: 130 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIRTIIERLG-SNIPIVALTATATPKVQE 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L +++ N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 188 DILKNLGMQEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRK 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KVEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRF 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C FY D K MI +P QE
Sbjct: 306 VIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIG 361
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E + RRK++L++F
Sbjct: 362 QALLQDIVAYAETSSSRRKFILHYF 386
>gi|303253309|ref|ZP_07339458.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307248139|ref|ZP_07530167.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647991|gb|EFL78198.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855316|gb|EFM87491.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 602
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 164/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 134 KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATADPTTRHDILQHLRL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F ++ +G S I+YC ++ E++ +
Sbjct: 194 TDPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFISKQQGKSGIVYCNSRKKVEEITE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 310 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 398
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 163/287 (56%), Gaps = 10/287 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I IDEAHCVSQWGHDFRP Y+ L E+R P VP++A+TATATP VI DI +L +
Sbjct: 974 KLARIVIDEAHCVSQWGHDFRPDYKTLGEVRRRYPKVPVMALTATATPHVIVDIKLNLSI 1033
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
I + F+RPNL+ K +I+ + L ++ EG T I+Y ++ E +
Sbjct: 1034 PQCEIFSQSFNRPNLFYDIRTKGKNIVQTIADL--IQSDHEGETGIVYTLSRKSAETIAK 1091
Query: 250 VL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L ++GI YHA + +++ ++ + IKVVVAT AFGMGIDKPDVR V+H+
Sbjct: 1092 KLRDQSGISAHHYHAKMETEEKTDVQRKWQSGQIKVVVATIAFGMGIDKPDVRFVVHHTL 1151
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK L YYQE GRAGRDG S CY ++ D T + + E ++ M+ RV
Sbjct: 1152 PKSLEGYYQETGRAGRDGGQSHCYLYFGYGDITSLRKMINDGEGNQEQRDRQSQMLNRVI 1211
Query: 369 KYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
+ E R CRR+ +L +F G A +K CDNCR+ EL
Sbjct: 1212 DFCEDKRECRRQSILRYF-GEKFDPASC----NKTCDNCRNGGHFEL 1253
>gi|315223920|ref|ZP_07865765.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
gi|314946092|gb|EFS98096.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
Length = 729
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 160/265 (60%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVID 182
FL +P I +A+DEAHC+S+WGHDFRP YR + + RL ++PI+A+TATATP V +
Sbjct: 132 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIRTIIERLG-SNIPIVALTATATPKVQE 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L +++ N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 190 DILKNLGMQEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRK 247
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 248 KVEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRF 307
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C FY D K MI +P QE
Sbjct: 308 VIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIG 363
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E + RRK++L++F
Sbjct: 364 QALLQDIVAYAETSSSRRKFILHYF 388
>gi|60682718|ref|YP_212862.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|60494152|emb|CAH08944.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
Length = 607
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 126 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S IIYC ++
Sbjct: 186 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIIDFITRHRGESGIIYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG++S FY D ++ +S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL----ILLTKFATESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 360 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 398
>gi|256820777|ref|YP_003142056.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429746398|ref|ZP_19279750.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429756068|ref|ZP_19288682.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|256582360|gb|ACU93495.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429166284|gb|EKY08277.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429172170|gb|EKY13749.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 729
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 10/264 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDD 183
FL +P I +A+DEAHC+S+WGHDFRP YR + + L ++PI+A+TATATP V +D
Sbjct: 132 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIRTIIERLGSNIPIVALTATATPKVQED 190
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +L +++ N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 191 ILKNLGMQEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 249 VEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK + +YYQE GRAGRDG C FY D K MI +P QE +
Sbjct: 309 IHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIGQ 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y E + RRK++L++F
Sbjct: 365 ALLQDIVAYAETSSSRRKFILHYF 388
>gi|393779596|ref|ZP_10367834.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392609916|gb|EIW92711.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 727
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 10/264 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDD 183
FL +P I +A+DEAHC+S+WGHDFRP YR + + L ++PI+A+TATATP V +D
Sbjct: 130 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIRTIIERLGSNIPIVALTATATPKVQED 188
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +L +++ N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 189 ILKNLGMQEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 247 VEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK + +YYQE GRAGRDG C FY D K MI +P QE +
Sbjct: 307 IHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIGQ 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y E + RRK++L++F
Sbjct: 363 ALLQDIVAYAETSSSRRKFILHYF 386
>gi|319643550|ref|ZP_07998171.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
gi|345518434|ref|ZP_08797885.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|254835825|gb|EET16134.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|317384814|gb|EFV65772.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
Length = 605
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 158/284 (55%), Gaps = 18/284 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA + DI
Sbjct: 120 FLLKDIQISLFAIDEAHCISQWGHDFRPEYTQLKVLRNQFPKVPIVALTATADKITRKDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
L L+DP I + FDRPNL L +Q D M + L E IIYC ++
Sbjct: 180 VQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKMRTI--LEFIEKHKNECGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S R + F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S QE +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL----VMLSKFATESSQQEINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 354 KLHRMQQYAESDICRRRILLNYF-GETM---------DHDCGNC 387
>gi|303287108|ref|XP_003062843.1| ATP-dependent DNA helicase [Micromonas pusilla CCMP1545]
gi|226455479|gb|EEH52782.1| ATP-dependent DNA helicase [Micromonas pusilla CCMP1545]
Length = 1049
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 161/283 (56%), Gaps = 21/283 (7%)
Query: 125 FLSRIPRIV------LIAIDEAHCVSQWGHDFRPSYRCLSELRL---PLPDVPILAVTAT 175
FLSR+ +V L+AIDEAHC+SQWGHDFR SYR L+ +R P +VPI+A+TAT
Sbjct: 227 FLSRLKEMVRSKKLGLVAIDEAHCLSQWGHDFRTSYRGLARVRAELAPNGEVPIMALTAT 286
Query: 176 ATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTI 235
A V +DI + L LR P + DRPNL ++ +K+ ADL+ + + GS I
Sbjct: 287 AVDAVREDIASVLELRAPFVAQNSCDRPNLAVSV-IKKRGGAADLKHVVDRVAGVAGSVI 345
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRP---------YHAHISLKQRKEIHGLFVKDLIKVVV 286
IYCPT E+V L N +RP YHA +S +R+ +H F+ KVVV
Sbjct: 346 IYCPTVREVEQVASHLG-NVFASRPDGAKNAVGTYHAQMSPSERERVHREFLTGRRKVVV 404
Query: 287 ATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMI 346
AT AFGMGIDKPD+R V+HYGAPK + YYQ++GRAGRDGL S Y DF+K
Sbjct: 405 ATVAFGMGIDKPDIRLVMHYGAPKTMEEYYQQVGRAGRDGLPSKVEMLYGDGDFSKYGSD 464
Query: 347 FQPNLNDSEIQEHSKTMMKRVEKY-LELRTCRRKYLLNHFKGS 388
F ++ K +E++ E CRR +L HF S
Sbjct: 465 FYVGGLSETVRRTQKASTDALERFSREPLACRRAGILAHFGES 507
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC
8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 158/284 (55%), Gaps = 18/284 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA + DI
Sbjct: 120 FLLKDIQISLFAIDEAHCISQWGHDFRPEYTQLKVLRNQFPKVPIVALTATADKITRKDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
L L+DP I + FDRPNL L +Q D M + L E IIYC ++
Sbjct: 180 VQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKMRTI--LEFIEKHKNECGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S R + F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S QE +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL----VMLSKFATESSQQEINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 354 KLHRMQQYAESDICRRRILLNYF-GETM---------DHDCGNC 387
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 164/292 (56%), Gaps = 7/292 (2%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R + I IDEAHCVSQWGHDFRP Y+ L +LR P VP++A+TATAT VI DI
Sbjct: 930 LYRNKKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRAKFPQVPVMALTATATQNVIVDIK 989
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVIC 244
+L +++ + + F+RPNLY K + + + + ++ T IIY ++
Sbjct: 990 HNLRMKNCQVFSQSFNRPNLYYEVRPKGSNPVVTQQIAALIKAKYPNVTGIIYTISRKQA 1049
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E V L +GI R YHA I+ ++ E+ + K IKVVVAT AFGMGIDKPDVR VI
Sbjct: 1050 EDVAQKLCEHGITARHYHAQITPSEKVEVQTAWQKGQIKVVVATIAFGMGIDKPDVRYVI 1109
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+G PK L YYQE GRAGRDG S C FY D + ++E +E M+
Sbjct: 1110 HHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKGDIRVLKKLILDGEGNNEQKERQMVML 1169
Query: 365 KRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
RV + + + CRR +L +F G + ++ +K CDNC+ + E +
Sbjct: 1170 NRVTAFCDNKADCRRTEVLRYF-GEDFSPSQC----NKTCDNCQAGLVFEQQ 1216
>gi|407692774|ref|YP_006817563.1| ATP-dependent DNA helicase RecQ [Actinobacillus suis H91-0380]
gi|407388831|gb|AFU19324.1| ATP-dependent DNA helicase RecQ [Actinobacillus suis H91-0380]
Length = 602
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 163/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 134 KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNVPLMALTATADPTTRHDILQHLRL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F + +G S I+YC ++ E++ +
Sbjct: 194 TDPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFIGKQQGKSGIVYCNSRKKVEEITE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLATRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 310 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 398
>gi|359299526|ref|ZP_09185365.1| ATP-dependent DNA helicase RecQ [Haemophilus [parainfluenzae] CCUG
13788]
gi|402304439|ref|ZP_10823509.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
gi|400378027|gb|EJP30892.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
Length = 601
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 171/295 (57%), Gaps = 22/295 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ IA+DEAHCVSQWGHDFRP Y L LR P++P++A+TATA P DI L L
Sbjct: 133 KVSFIAVDEAHCVSQWGHDFRPEYTLLGNLRKTFPNIPLMALTATADPTTRADILHHLRL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F N +G S I+YC ++ E++ +
Sbjct: 193 NDPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFINAQKGKSGIVYCNSRKKVEEITE 248
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS I YHA +S++QR+ + F +D ++VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 249 KLSARHISVMGYHAGMSVQQRETVQNAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLP 308
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 309 RSIESYYQETGRAGRDDLPSEAVMFYDPADYAWLQKILLEEPESEQRDIKQHK---LQAI 365
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLELEQV 417
+ E +TCRR LLN+F ES+ P K CD C +++ +L+ ++V
Sbjct: 366 GAFAESQTCRRLVLLNYF-------GESRQAPCKNCDICLDPPKKYDGLLDAQKV 413
>gi|420149707|ref|ZP_14656877.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394753188|gb|EJF36768.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 732
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 10/264 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDD 183
FL +P I +A+DEAHC+S+WGHDFRP YR + + L ++PI+A+TATATP V +D
Sbjct: 135 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIRTIIERLGSNIPIVALTATATPKVQED 193
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +L +++ N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 194 ILKNLGMQEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRKK 251
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 252 VEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFV 311
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK + +YYQE GRAGRDG C FY D K MI +P QE +
Sbjct: 312 IHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIGQ 367
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y E + RRK++L++F
Sbjct: 368 ALLQDIVAYAETSSSRRKFILHYF 391
>gi|381199108|ref|ZP_09906260.1| ATP-dependent DNA helicase RecQ [Sphingobium yanoikuyae XLDN2-5]
Length = 590
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 152/286 (53%), Gaps = 23/286 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R ++ L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DI
Sbjct: 124 LLRSAKVALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADAHTRKDIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + + +I +GFDRPN+ A V D + R+L + GS I+Y PT+ E
Sbjct: 184 VQLGIPEDGLIISGFDRPNIRYA--VHSRDGLT--RQLADLLAANPGSGIVYAPTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ + L R G R YHA + QR F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAETLGRGGRAVRAYHAGMDPAQRAANQSAFIASEDMVMVATVAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNN---MIFQPNLNDSEIQEHSKT 362
G PK + YYQE GRAGRDG +V + F+ DF + M +P Q+ +
Sbjct: 300 AGLPKSIEGYYQESGRAGRDGEPAVAHLFWGAEDFARARQRIMELEPAR-----QQGERA 354
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + +E TCRR LL HF + PP C CDNC
Sbjct: 355 RIAALGALVETATCRRAILLRHF---------GENPPATCGNCDNC 391
>gi|37522198|ref|NP_925575.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
gi|35213198|dbj|BAC90570.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
Length = 746
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 158/283 (55%), Gaps = 9/283 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
++ R + L+A+DEAHCVS+WGHDFRP YR L+ +R +P LA+TATAT V DI
Sbjct: 142 YVQRQGGLSLLAVDEAHCVSEWGHDFRPEYRQLAAVRERFAALPTLALTATATERVRQDI 201
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L LRDP+I FDRPNL+ A K A+L L S I+YC ++
Sbjct: 202 LVQLKLRDPHIHIASFDRPNLHYAVLAKDKGAYAEL--LGRLRRLDGASAIVYCQSRRAV 259
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + + L +G+ PYHA ++ + R F++D V+VAT AFGMGI KPDVR V
Sbjct: 260 EALAERLVADGLNALPYHAGMAAEMRSRHQTQFLRDDAPVLVATVAFGMGIAKPDVRAVF 319
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY P++L YYQE GRAGRDG + C F+ D K + +D Q +++ +
Sbjct: 320 HYELPRNLEGYYQESGRAGRDGQPADCVLFFSPGDRAKIEYLVAQK-SDPHEQRLARSQL 378
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++ Y E CRR+ LL +F G ++ A+ CDNCR
Sbjct: 379 AQMLAYAESTVCRRRILLGYF-GEALAEADC-----GGCDNCR 415
>gi|126208588|ref|YP_001053813.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|303250135|ref|ZP_07336337.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246031|ref|ZP_07528113.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250372|ref|ZP_07532320.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252754|ref|ZP_07534645.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255013|ref|ZP_07536831.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307257169|ref|ZP_07538941.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307259449|ref|ZP_07541174.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307261598|ref|ZP_07543266.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|126097380|gb|ABN74208.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302651198|gb|EFL81352.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852966|gb|EFM85189.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857582|gb|EFM89690.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859786|gb|EFM91808.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861886|gb|EFM93862.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306864331|gb|EFM96242.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306866385|gb|EFM98248.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868721|gb|EFN00530.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 602
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 164/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 134 KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATADPTTRHDILQHLRL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F ++ +G S I+YC ++ E++ +
Sbjct: 194 TDPHTYLGSFDRPNIRYTVQEK----FKPVEQLAKFISKQQGKSGIVYCNSRKKVEEITE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 310 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 398
>gi|423283377|ref|ZP_17262261.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|404581095|gb|EKA85801.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 601
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 120 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 180 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIVDFITRHRGESGIVYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRNETQDDFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG++S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 392
>gi|240949474|ref|ZP_04753814.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor NM305]
gi|240296047|gb|EER46708.1| ATP-dependent DNA helicase RecQ [Actinobacillus minor NM305]
Length = 604
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 163/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 133 KISLIAVDEAHCVSQWGHDFRPEYTLLGGLRSTFPNVPMMALTATADPTTRHDIIHHLRL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
++P+ FDRPN+ K + +L F + +G S I+YC ++ E++ +
Sbjct: 193 QEPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFIAKQQGKSGIVYCNSRKKVEEITE 248
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS G+ YHA ++++QR+ + F +D I+VVVAT AFGMGI+K +VR V H+ P
Sbjct: 249 KLSARGVSVMGYHAGMTIQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVAHFDLP 308
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P I++H ++ +
Sbjct: 309 RSIESYYQETGRAGRDDLPSEAILFYDPADYAWLQKVLLEEPESEQRNIKQHK---LQAI 365
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 366 SAFAESQTCRRLVLLNYF-------GESKQEPCKNCDIC 397
>gi|375359515|ref|YP_005112287.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|301164196|emb|CBW23754.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
Length = 607
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 126 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 186 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIIDFITRHRGESGIVYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG++S FY D ++ +S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL----ILLTKFATESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 360 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 398
>gi|373461301|ref|ZP_09553043.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
gi|371952855|gb|EHO70688.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
Length = 725
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 158/289 (54%), Gaps = 17/289 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL + +I AIDEAHC+S+WGHDFRP YR + + D P++A+TATAT V
Sbjct: 129 IDFLKSV-KISFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGDAPVIALTATATDKVRS 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + D + F+RPNLY K D++ +++ F Q EG S IIYC ++
Sbjct: 188 DIKKSLAIIDAKEFKSSFNRPNLYYEVRQKSDEVD---KQIIKFIRQHEGKSGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEELSEVLKANEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG +C FY D K + Q+ +
Sbjct: 305 FVIHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYAQKDLKKLEKFMEGKPVAE--QDIGR 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+++ Y CRRK LL++F G T D C CDNC H
Sbjct: 363 QLLQETAAYATSSVCRRKMLLHYF-GEEYT-------QDNCHNCDNCLH 403
>gi|165976542|ref|YP_001652135.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165876643|gb|ABY69691.1| ATP-dependent DNA helicase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 602
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 164/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 134 KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATADPTTRHDILQHLRL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F ++ +G S I+YC ++ E++ +
Sbjct: 194 TDPHTYLGSFDRPNIRYTVQEK----FKPVEQLAKFISKQQGKSGIVYCNSRKKVEEITE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 310 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 398
>gi|53714712|ref|YP_100704.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|52217577|dbj|BAD50170.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
Length = 607
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 126 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 186 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIIDFITRHRGESGIVYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG++S FY D ++ +S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL----ILLTKFATESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 360 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 398
>gi|190150443|ref|YP_001968968.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263787|ref|ZP_07545393.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915574|gb|ACE61826.1| ATP-dependent DNA helicase RecQ [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870908|gb|EFN02646.1| ATP-dependent DNA helicase recQ [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 602
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 164/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 134 KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATADPTTRHDILQHLRL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F ++ +G S I+YC ++ E++ +
Sbjct: 194 TDPHTYLGSFDRPNIRYTVQEK----FKPVEQLAKFISKQQGKSGIVYCNSRKKVEEITE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 310 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 398
>gi|46143327|ref|ZP_00135472.2| COG0514: Superfamily II DNA helicase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 604
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 164/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 136 KISLIAVDEAHCVSQWGHDFRPEYTLLGNLRDTFPNVPLMALTATADPTTRHDILQHLRL 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F ++ +G S I+YC ++ E++ +
Sbjct: 196 TDPHTYLGSFDRPNIRYTVQEK----FKPVEQLAKFISKQQGKSGIVYCNSRKKVEEITE 251
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 252 KLASRKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 311
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 312 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESEQRDIKQHK---LQAI 368
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 369 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 400
>gi|383119448|ref|ZP_09940187.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|382973213|gb|EES87060.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
Length = 601
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 120 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 180 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIVDFITRHRGESGIVYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG++S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 392
>gi|322699139|gb|EFY90903.1| QDE3 protein [Metarhizium acridum CQMa 102]
Length = 1698
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 164/289 (56%), Gaps = 11/289 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ + IDEAHCVSQWGHDFRP Y+ L ++R+ P+VPI+A+TATAT VI DI +L +
Sbjct: 964 KFARLVIDEAHCVSQWGHDFRPDYKSLGQVRMKFPEVPIMALTATATQNVIVDIKHNLNM 1023
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+ + + F+RPNLY K + A + ++ T I+Y ++ E+V
Sbjct: 1024 ANCQVFSQSFNRPNLYYEVRTKTSNSNATESIASLINAKYRNITGIVYTISRKQAEEVAR 1083
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ +GI R YHA I +++ E+ + K IKVVVAT AFGMGIDKP+VR V+H+G P
Sbjct: 1084 KLAGHGIAARHYHAAIDPQEKVEVQTSWQKGDIKVVVATIAFGMGIDKPNVRFVMHHGLP 1143
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L YYQE GRAGRDG S C FY AD + ++E +E M+ RV
Sbjct: 1144 KSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKKLITDGDGNNEQKERQMVMLNRVTA 1203
Query: 370 YLELRT-CRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCRHNEMLELE 415
+ + ++ CRR +L +F E VP K CDNCR + E +
Sbjct: 1204 FCDNKSDCRRTEVLRYF-------GEDFVPSQCRKSCDNCRAGLVFEQQ 1245
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
Length = 731
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 164/300 (54%), Gaps = 19/300 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L E LP D+ L I AIDEAHCVS+WGHDFRP YR + +R PD+P
Sbjct: 127 RLLGERFLPFLDIVANKLG----ISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDRYPDIP 182
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
I+A+TATAT V DI L LR+P I F+RPNLY K A++ ++ +
Sbjct: 183 IMALTATATERVRQDIIQQLTLRNPYIHVASFNRPNLYYEVRPKTKHSFAEVLQIIQKKG 242
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
GS IIYC ++ E+V L ++GI PYHA ++ R F++D ++V+VAT
Sbjct: 243 ---GSGIIYCLSRKKVEEVAYKLQQSGIAALPYHAGMNDVDRATNQTRFIRDDVQVMVAT 299
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIHY PK+L YYQE GRAGRD + C F+ D + I +
Sbjct: 300 IAFGMGINKPDVRFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDVKMIDYIIE 359
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ E Q ++ ++RV Y E CRR L++F S P C CDNC
Sbjct: 360 QKPDPQE-QRIARQQLRRVINYAESTDCRRTIQLSYFGDSF---------PGNCGTCDNC 409
>gi|375255218|ref|YP_005014385.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
gi|363408301|gb|AEW21987.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
Length = 786
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 157/288 (54%), Gaps = 19/288 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 188 IGFLRQV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPKVQH 246
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D + + F+R NLY K DI R++ + EG S IIYC ++
Sbjct: 247 DIQKNLGMMDAKVFKSSFNRANLYYEIRPKGKDID---REIIKYIKANEGKSGIIYCLSR 303
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ D+L NGI+ PYHA + +QR F+ + V+VAT AFGMGIDKPDVR
Sbjct: 304 KKVEEFADILCANGIKALPYHAGMDSQQRSANQDAFLMEKTDVIVATIAFGMGIDKPDVR 363
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
VIHY PK L YYQE GRAGRDG C FY D K Q P + QE
Sbjct: 364 YVIHYDIPKSLEGYYQETGRAGRDGGEGQCVAFYANKDLQKLEKFLQGKPIVE----QEI 419
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD-KCCDNC 406
K ++ Y E CRRK LL++F E + CCDNC
Sbjct: 420 GKQLLLETAAYAETAVCRRKVLLHYF-------GEEYFEENCGCCDNC 460
>gi|218128449|ref|ZP_03457253.1| hypothetical protein BACEGG_00017 [Bacteroides eggerthii DSM 20697]
gi|217989340|gb|EEC55653.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 155/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDKDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F + + C CDNC
Sbjct: 367 LETAAYAESSVCRRKTLLHYFG--------EEYMEENCGNCDNC 402
>gi|317475725|ref|ZP_07934984.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316908108|gb|EFV29803.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 727
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 155/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDKDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F + + C CDNC
Sbjct: 367 LETAAYAESSVCRRKTLLHYFG--------EEYMEENCGNCDNC 402
>gi|317504966|ref|ZP_07962914.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
gi|315663848|gb|EFV03567.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
Length = 725
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 157/287 (54%), Gaps = 17/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL I I AIDEAHC+S+WGHDFRP YR + + + P++A+TATAT V DI
Sbjct: 131 FLKSI-HISFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGNAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + + F+R NLY K +D+ +++ F Q EG S IIYC ++
Sbjct: 190 KKSLGIMDAHEFKSSFNRANLYYEVRPKTNDVD---KQIIKFIRQHEGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELAEVLKANNIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 307 IHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYAQKDLKKLEKFMEGKPVAE--QDIGRQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ Y E CRRK LL++F + P D C CDNC H
Sbjct: 365 LQETAAYAESSVCRRKMLLHYFG--------EEYPHDNCHNCDNCLH 403
>gi|336411370|ref|ZP_08591837.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|423251179|ref|ZP_17232194.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423254505|ref|ZP_17235435.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|335942081|gb|EGN03930.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|392652136|gb|EIY45798.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392653827|gb|EIY47478.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
Length = 601
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 120 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 180 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIIDFITRHRGESGIVYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG++S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 392
>gi|357060591|ref|ZP_09121359.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
gi|355375896|gb|EHG23164.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
Length = 608
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/268 (42%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
++SR +I L+AIDEAHC+SQWGHDFRP Y L E+R LP+VP++A+TATA V +DI
Sbjct: 123 WISR-AKISLVAIDEAHCISQWGHDFRPEYTQLGEIRRDLPNVPMMALTATADKVTREDI 181
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
L L +P I + FDRPNL L ++ + L+ + F + G + IIYC ++
Sbjct: 182 LQQLGLHNPYISVSSFDRPNLSLTV-IRGFNGSEKLKAILRFLRERPGQAGIIYCMSRKT 240
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E V + L+ G++ YHA +S R + F+ D ++++VAT AFGMGIDK +VR V
Sbjct: 241 TESVAEKLTAKGVRALSYHAGLSADVRDKTQTAFINDDVQIIVATVAFGMGIDKSNVRWV 300
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
+HY PK + +YYQEIGRAGRDG + FY AD + Q DS Q +
Sbjct: 301 VHYNLPKSIESYYQEIGRAGRDGDPADTLLFYNYADIIQLERFAQ----DSGQQNINMER 356
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVT 391
+ R+ +Y E CRR+ LLN+F + T
Sbjct: 357 LNRMREYAEASVCRRRILLNYFGEETST 384
>gi|154253433|ref|YP_001414257.1| ATP-dependent DNA helicase RecQ [Parvibaculum lavamentivorans DS-1]
gi|154157383|gb|ABS64600.1| ATP-dependent DNA helicase RecQ [Parvibaculum lavamentivorans DS-1]
Length = 633
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 157/285 (55%), Gaps = 13/285 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL+R+P + L AIDEAHC+SQWGHDFRP Y L L+ PDVP LA+TATA P D
Sbjct: 157 ISFLARVP-LALFAIDEAHCISQWGHDFRPEYLQLGRLKERFPDVPRLALTATADPQTRD 215
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
D+ L L D I + FDRPN+ V++D+ + LR +F EG S I+YC ++
Sbjct: 216 DLVHRLQLDDARIFSASFDRPNIRYTI-VRKDNAKSQLR---DFLKAHEGASGIVYCLSR 271
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ D L+ GI PYHA + R + F+KD V+VAT AFGMGIDKPDVR
Sbjct: 272 KKVEETADWLTAQGILALPYHAGLDRSIRDKHQDAFLKDEGPVLVATIAFGMGIDKPDVR 331
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V H P + AYYQE GRAGRDGL S + + +D + + + +++ +
Sbjct: 332 FVAHLDLPSSIEAYYQETGRAGRDGLPSDAWMAWGMSDVSLRRRMIDEGASPELVKQVER 391
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
T + + E TCRR+ LL HF ES CD C
Sbjct: 392 TKLDALLHVCETATCRRQALLAHF-------GESHAGACGNCDAC 429
>gi|281425296|ref|ZP_06256209.1| hypothetical protein HMPREF0971_02268 [Prevotella oris F0302]
gi|281400589|gb|EFB31420.1| ATP-dependent DNA helicase RecQ [Prevotella oris F0302]
Length = 725
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 164/304 (53%), Gaps = 21/304 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + ++ AIDEAHC+S+WGHDFRP YR + + PI+A+TATAT V DI
Sbjct: 131 FLQSV-KVSFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGTAPIIALTATATDKVRSDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+R NLY K +D+ +++ F Q EG S IIYC ++
Sbjct: 190 KKSLGITDAKEFKSSFNRANLYYEVRPKTNDVD---KQIIKFIRQHEGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELAEVLKANEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 307 IHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYAQKDLKKLEKFMEGKPVAE--QDIGRQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGG 421
++ Y E CRRK LL++F + P D C CDNC H + E++ G
Sbjct: 365 LQETAAYAESSVCRRKMLLHYFG--------EEYPHDNCHNCDNCLHPK----EKIEAGK 412
Query: 422 RMVV 425
+V+
Sbjct: 413 ALVI 416
>gi|374385551|ref|ZP_09643054.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
gi|373225253|gb|EHP47587.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
Length = 735
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 158/291 (54%), Gaps = 20/291 (6%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL +I +I A+DEAHC+S+WGHDFR YR + + + PI+A+TATATP
Sbjct: 137 DSNVEFLKKI-KISFFAVDEAHCISEWGHDFRTEYRKIRPIVEQIGKAPIIALTATATPK 195
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D + + F+RPNLY K D + + F + EG S IIYC
Sbjct: 196 VQHDIQKNLDMLDAEVFKSSFNRPNLYYEVRPKNDPT----KDIIKFIKKHEGKSGIIYC 251
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E++ +VL NGI+ PYHA + R F+ + + V+VAT AFGMGIDKP
Sbjct: 252 LSRKKVEELAEVLCINGIKAAPYHAGMDATTRSANQDKFLMEEVDVIVATIAFGMGIDKP 311
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQ 357
DVR VIHY PK L YYQE GRAGRDG +C T+Y D K Q + + EI
Sbjct: 312 DVRFVIHYDIPKSLEGYYQETGRAGRDGGEGICITYYSYKDIQKLEKFMQGKPIAEQEI- 370
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDK--CCDNC 406
K ++ Y E CRRK LL++F D CCDNC
Sbjct: 371 --GKQLLMETVSYAETSLCRRKVLLHYFG--------EDFDEDNCGCCDNC 411
>gi|213962479|ref|ZP_03390741.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
gi|213954805|gb|EEB66125.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
Length = 727
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 159/265 (60%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVID 182
FL +P I +A+DEAHC+S+WGHDFRP YR + + RL ++PI+A+TATATP V +
Sbjct: 130 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIKTIIERLG-SNIPIVALTATATPKVQE 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 188 DILKNLGMLEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRK 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 246 KVEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRF 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C FY D K MI +P QE
Sbjct: 306 VIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIG 361
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E + RRK++L++F
Sbjct: 362 QALLQDIVAYAETSSSRRKFILHYF 386
>gi|429753766|ref|ZP_19286544.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429171815|gb|EKY13407.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 729
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 159/265 (60%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVID 182
FL +P I +A+DEAHC+S+WGHDFRP YR + + RL ++PI+A+TATATP V +
Sbjct: 132 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIKTIIERLG-SNIPIVALTATATPKVQE 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + N+ + F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 190 DILKNLGMLEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFVKQNSKKSG--IIYCLSRK 247
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 248 KVEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRF 307
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C FY D K MI +P QE
Sbjct: 308 VIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIG 363
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E + RRK++L++F
Sbjct: 364 QALLQDIVAYAETSSSRRKFILHYF 388
>gi|390941990|ref|YP_006405751.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390415418|gb|AFL82996.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 711
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 178/332 (53%), Gaps = 27/332 (8%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL D P++ + + L+AIDEAHCVSQWGHDFRP Y + ELR P +P +A+TA
Sbjct: 122 RLYRGDYPLIDFLKTVNLSLVAIDEAHCVSQWGHDFRPEYLKIGELRKSFPQIPFIALTA 181
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TA + DI L L+ P + FDR N+ + K+D M L + +F + G
Sbjct: 182 TADKLTRKDIADKLGLKTPQWFISSFDRSNITYRVTAKRD-AMGKLLEFLDFHKKDSG-- 238
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
+IYC ++ E+ L G+ PYHA + ++R++ LF+KD +K++VAT AFGMG
Sbjct: 239 VIYCLSRKNVEETASELQARGLSALPYHAGLPREEREKNQELFIKDEVKIMVATIAFGMG 298
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
IDK +VR V+H P+++ YYQE GRAGRDGL S FY D + L+
Sbjct: 299 IDKSNVRFVVHMNMPQNVEGYYQETGRAGRDGLPSDALLFYSGQDANTLGRM----LDRG 354
Query: 355 EIQEHSKTMMKRVEK---YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEM 411
+ QE + M +++EK + + + CRRK+LLN+F E CD C
Sbjct: 355 DNQEFAHVMQEKLEKMKSFCQTKICRRKFLLNYF-------GEDHTGDCGNCDICFQKGN 407
Query: 412 LELEQVPRGGRMVVENSEVWMSTEARPGREAF 443
+ +P S++ +ST AR G E+F
Sbjct: 408 RQDMTIP---------SQMLLSTIARLG-ESF 429
>gi|257058944|ref|YP_003136832.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
gi|256589110|gb|ACU99996.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
Length = 709
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 169/305 (55%), Gaps = 15/305 (4%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L++ P D F++ + AIDEAHCVS+WGHDFRP YR L +LR P VP
Sbjct: 119 RLLNDKFTPFLD----FIAEKIGVSFFAIDEAHCVSEWGHDFRPEYRQLKQLRQRYPQVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+LA+TATAT V +DI L L+ P I T F+RPNL K+ KL ++
Sbjct: 175 MLALTATATKRVREDIIHQLELKQPGIHITSFNRPNLDYDVQFKE---RRSYNKLLSYIR 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
Q +GS I+YC ++ + + L +GI+ PYHA ++ + R F++D ++V+VAT
Sbjct: 232 QQKGSGIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRDDVQVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIHY P++L YYQE GRAGRDG + C F+ +D K +
Sbjct: 292 IAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDLKKIEYLID 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
E Q+ ++ +++V Y E CRR +L +F E CDNCR
Sbjct: 352 QKSTPQE-QKIARQQLRQVVDYAEGTECRRTIVLRYF-------GERFAGNCGKCDNCRD 403
Query: 409 NEMLE 413
+ LE
Sbjct: 404 PKPLE 408
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 164/300 (54%), Gaps = 19/300 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L E LP D+ L I AIDEAHCVS+WGHDFRP YR + +R PD+P
Sbjct: 127 RLLGERFLPFLDIVANKLG----ISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDRYPDIP 182
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
I+ +TATAT V DI L LR+P I F+RPNLY K A++ ++ +
Sbjct: 183 IMGLTATATERVRQDIIQQLTLRNPYIHVASFNRPNLYYEVRPKTKHSFAEVLQIIKKKG 242
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
GS IIYC ++ ++V L ++GIQ PYHA ++ R F++D ++V+VAT
Sbjct: 243 ---GSGIIYCLSRKKVDEVAYKLQQSGIQALPYHAGMNDVDRATNQTRFIRDDVQVMVAT 299
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIHY PK+L YYQE GRAGRD + C F+ D + I +
Sbjct: 300 IAFGMGINKPDVRFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDVKMIDYIIE 359
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ E Q ++ ++RV Y E CRR L++F S P C CDNC
Sbjct: 360 QKPDPQE-QRIARQQLRRVINYAESTDCRRTIQLSYFGDSF---------PGNCGTCDNC 409
>gi|381186153|ref|ZP_09893727.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379651827|gb|EIA10388.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 731
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 153/264 (57%), Gaps = 11/264 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I +AIDEAHC+S+WGHDFRP YR L + L D+PI+ +TATATP V +DI
Sbjct: 132 FLKTV-KISFVAIDEAHCISEWGHDFRPEYRNLKHIIKQLGDLPIIGLTATATPKVQEDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D F+RPNLY K ++ +D+ + F Q +G S IIYC ++
Sbjct: 191 LKNLDMCDATTFKASFNRPNLYYEVRTKTKNVESDIIR---FIKQHKGKSGIIYCLSRKK 247
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + VL NGI PYHA + K R +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 248 VEAIAHVLQVNGISAVPYHAGLDAKTRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFV 307
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK L +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 308 IHHDIPKSLESYYQETGRAGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAE----QEIGF 363
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 364 ALLQEVVAYAETSMSRRKFLLHYF 387
>gi|300771774|ref|ZP_07081645.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
gi|300761160|gb|EFK57985.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
Length = 729
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 169/291 (58%), Gaps = 16/291 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATP 178
D I FL +I + +A+DEAHC+S+WGHDFRP YR + ++ + + +PI+A+TATATP
Sbjct: 126 DENIEFLRQIT-VSFVAVDEAHCISEWGHDFRPEYRKIRQVINGIGENIPIIALTATATP 184
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYC 238
V DI +L + D + + F+R NLY K++ + +R + N + + I+YC
Sbjct: 185 KVQSDIRKNLQMTDATLFKSSFNRTNLYYEVRTKKNVVKEIVRFIKNNSGK---TGIVYC 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E++ +VL+ NGI+ PYHA + K R + F+ + ++V+VAT AFGMGIDKP
Sbjct: 242 LSRKKVEEIAEVLNINGIKALPYHAGLDAKTRADTQDKFLMEDVEVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIH+ PK + YYQE GRAGRDG VC TFY D K + D + E
Sbjct: 302 DVRYVIHHDIPKSMEGYYQETGRAGRDGGEGVCVTFYSEKDVEK----LTKFMKDKPVSE 357
Query: 359 H--SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++K V Y E CRRK +L++F G + + + CDNC+
Sbjct: 358 REIGTQILKEVIDYSESAVCRRKQILHYF-GENF----DEAGCNNMCDNCK 403
>gi|404449892|ref|ZP_11014879.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
gi|403764371|gb|EJZ25272.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
Length = 726
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 172/290 (59%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
+LFL + ++ +AIDEAHC+S+WGHDFRP YR + + + ++PI+A+TATATP V
Sbjct: 124 VLFL-KDAKLSFVAIDEAHCISEWGHDFRPEYRKIKTIIAQIGSNLPIVALTATATPKVQ 182
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCP 239
DI +L + + ++ + F+R NLY K + + +K + ++Q S IIYC
Sbjct: 183 QDIQRNLQMEEADLFKSSFNRTNLYYEVRPK---VKNETKKQIIKYIKSQKGKSGIIYCL 239
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ ++L NGI+ PYHA + R + F+ + + V+VAT AFGMGIDKPD
Sbjct: 240 SRKKVEEIANLLKVNGIKAAPYHAGLEQNVRVKNQDDFLNEEVDVIVATIAFGMGIDKPD 299
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDGL C FYK D K F + +E +E+
Sbjct: 300 VRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYDDIVKLEK-FNKDKPVTE-REN 357
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+K +++ + Y E CRRK+LL++F ++ D C CDNC+
Sbjct: 358 AKILLQEMAAYAESSICRRKFLLHYF---------GEMLEDDCGHCDNCK 398
>gi|219853011|ref|YP_002467443.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
gi|219547270|gb|ACL17720.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
Length = 606
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 165/280 (58%), Gaps = 15/280 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIA+DEAHC+S+WGH+FRP YR L++L+ P VP++A+TATA P V DIC L +
Sbjct: 131 IRLIAVDEAHCISEWGHNFRPEYRQLAQLKKLFPAVPLVALTATAIPEVRRDICQQLGIS 190
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
D + F+R NL K++ + L L+ +++ S IIYC +K E+V L
Sbjct: 191 DAHEFVGSFNRKNLMYRVVEKKNPKILLLTFLSRHQHE---SGIIYCMSKKETEEVARDL 247
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
R G + YHA +S + R ++ F+K+ I +V AT AFGMGIDKPDVR VIHY PK
Sbjct: 248 RRRGYNAQAYHAGLSKQVRTKVQDGFIKNTITIVCATIAFGMGIDKPDVRFVIHYDIPKT 307
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ +YYQE GRAGRDG S C FY D + +M+ ++ + ++ + + + E Y
Sbjct: 308 VESYYQETGRAGRDGRPSECVLFYSRGDIARVRSMLEHDHMTERNLRASLRKLQEMTE-Y 366
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
E TCRR++LL++F S P + C CDNC H
Sbjct: 367 CEAITCRRRFLLSYFGEES--------PDEHCTSCDNCNH 398
>gi|440748399|ref|ZP_20927652.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
gi|436483223|gb|ELP39291.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
Length = 725
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 172/293 (58%), Gaps = 20/293 (6%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATP 178
D I FL ++ +AIDEAHC+S+WGHDFRP YR + + + P++PI+A+TATATP
Sbjct: 121 DENIAFLKE-AKLSFVAIDEAHCISEWGHDFRPEYRKIKSIIGQIGPELPIVALTATATP 179
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTII 236
V DI +L + + +I + F+RPNL+ VK + A ++ + ++Q S II
Sbjct: 180 KVQQDIQRNLQMEEADIFKSSFNRPNLFYEVRPKVKNETKKAIIKYI---KSQKGKSGII 236
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC ++ E++ ++L NGI PYHA + R + F+ + I V+VAT AFGMGID
Sbjct: 237 YCLSRKKVEEIAELLKVNGISAAPYHAGLDQAVRIKNQDDFLNEEIDVIVATIAFGMGID 296
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
KPDVR VIHY PK L YYQE GRAGRDGL C FY+ D K F + +E
Sbjct: 297 KPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYRYDDIIKLEK-FNKDKPVTE- 354
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+E++K +++ + Y E CRR+ LL++F ++ + C CDNC+
Sbjct: 355 RENAKVLLEEMAAYAESSMCRRRVLLHYF---------GEMLEEDCGYCDNCK 398
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 156/276 (56%), Gaps = 13/276 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
RI L AIDEAHC+SQWGH+FRP YR LS +R DVPI+A+TATATP V DI + L L
Sbjct: 134 RISLFAIDEAHCISQWGHEFRPEYRKLSIIRRTFADVPIIALTATATPSVRSDIISELSL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+P + F+R NL K+D ++ L + +N+ S I+YC +K + V
Sbjct: 194 HNPAVFVGSFNRENLIYRIVKKEDGEQQLVQFLKSHQNE---SGIVYCFSKRQVTDLARV 250
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L +NG PYHA + R E F++D ++++VAT AFGMGI+KPDVR V+H+ PK
Sbjct: 251 LQKNGFSALPYHADLPKSVRHETQDRFLRDEVRIIVATVAFGMGINKPDVRFVVHFDLPK 310
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+L YYQE GRAGRDG + C Y DF K + + +E Q + + + V Y
Sbjct: 311 NLEHYYQETGRAGRDGDPAECLLLYSRGDFRKIEYLIEQMAEGTERQVSLRKLHEMV-GY 369
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E R CRR LL +F ES P C NC
Sbjct: 370 CESRACRRAVLLTYF-------GESWDKP--SCGNC 396
>gi|326800755|ref|YP_004318574.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
gi|326551519|gb|ADZ79904.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
Length = 729
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 194/394 (49%), Gaps = 63/394 (15%)
Query: 28 ELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYV--TNNTSFLSRIPR 85
+LR + HF SS+ +E D +++Y+ PE + T+N FL I
Sbjct: 78 QLRAFGGADSIAHFLNSSLNKSEITRVKQDVLDGKTKLLYVAPESLAKTDNIEFLKLIT- 136
Query: 86 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQ 145
+ +A+DEAHC+S+WGHDFRP YR + R V+ I E
Sbjct: 137 VSFVAVDEAHCISEWGHDFRPEYRKI-------------------RQVINGIGE------ 171
Query: 146 WGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNL 205
++PI+A+TATATP V DI +L + D + + F+RPNL
Sbjct: 172 --------------------NIPIIALTATATPKVQSDIRKNLQMNDATLFKSSFNRPNL 211
Query: 206 YLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHI 265
Y K+ +++ ++ K +N S IIYC ++ E++ +VL+ NGI PYHA +
Sbjct: 212 YYEVRPKK-NVVKEIVKF--IKNNPSKSGIIYCLSRKKVEEIAEVLNINGISALPYHAGL 268
Query: 266 SLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRD 325
K R E F+ + ++V+VAT AFGMGIDKPDVR VIH+ PK + YYQE GRAGRD
Sbjct: 269 DAKTRAETQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRD 328
Query: 326 GLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH--SKTMMKRVEKYLELRTCRRKYLLN 383
G VC FY D K + D + E ++K V Y E CRRK +L+
Sbjct: 329 GGEGVCIAFYSEKDIEK----LTKFMKDKPVSEREIGTQILKEVIDYSESSVCRRKQILH 384
Query: 384 HFKGSSVTVAESQVPPDKCCDNCR-HNEMLELEQ 416
+F G + A + CDNC H + E+
Sbjct: 385 YF-GENFNEAGC----NNMCDNCNSHRTQFDAEE 413
>gi|160890574|ref|ZP_02071577.1| hypothetical protein BACUNI_03017 [Bacteroides uniformis ATCC 8492]
gi|317479884|ref|ZP_07939001.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|423304003|ref|ZP_17282002.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423307273|ref|ZP_17285263.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|156859573|gb|EDO53004.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
gi|316903958|gb|EFV25795.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|392685931|gb|EIY79239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392690525|gb|EIY83788.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 727
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 155/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDRDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F + + C CDNC
Sbjct: 367 LETAAYAESSVCRRKALLHYFGEEYI--------EENCGNCDNC 402
>gi|270295711|ref|ZP_06201911.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270273115|gb|EFA18977.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 727
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 155/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDRDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F + + C CDNC
Sbjct: 367 LETAAYAESSVCRRKALLHYFG--------EEYMEENCGNCDNC 402
>gi|392399436|ref|YP_006436037.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
gi|390530514|gb|AFM06244.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
Length = 729
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 158/263 (60%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL++ + IAIDEAHC+S+WGHDFRP YR + + L D+PI+A+TATATP V DI
Sbjct: 129 FLAK-ANLSFIAIDEAHCISEWGHDFRPEYRRIRFIVDSLGDLPIIALTATATPKVQQDI 187
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D N+ T F+R NLY K + ++ L + Q S IIYC ++
Sbjct: 188 QKNLHMEDANVFKTSFNRQNLYYEVRPKTNVKKQLIKYLKGKKGQ---SGIIYCLSRKKV 244
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ + L N I++RPYHA + R + F+ + + ++VAT AFGMGIDKPDVRCVI
Sbjct: 245 EEIHEFLKVNDIKSRPYHAGLDSSIRMQNQDAFLNEEVDIIVATIAFGMGIDKPDVRCVI 304
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE--HSKT 362
HY APK L YYQE GRAGRDGL++ C FY D K + D + E +++
Sbjct: 305 HYDAPKSLEGYYQETGRAGRDGLNADCIMFYSPEDIHK----LEKFNKDKPVTERDNARY 360
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y CRR+ LL++F
Sbjct: 361 LLQEMADYATSGVCRRRQLLHYF 383
>gi|329957341|ref|ZP_08297861.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328523054|gb|EGF50157.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 727
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 156/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVEAQVFKSSFNRPNLYYEVRPKTANVDKDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 367 LETAAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 402
>gi|332882718|ref|ZP_08450329.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679220|gb|EGJ52206.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 729
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 159/265 (60%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVID 182
FL +P I +A+DEAHC+S+WGHDFRP YR + + RL ++PI+A+TATATP V +
Sbjct: 132 FLKTVP-ISFVAVDEAHCISEWGHDFRPEYRNIKTIIERLG-SNIPIVALTATATPKVQE 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + N+ + F+RPNLY K ++ AD+ + + + S IIYC ++
Sbjct: 190 DILKNLGMLEANVFKSSFNRPNLYYEVRPKTKNVDADIIRFV--KQNTKKSGIIYCLSRK 247
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 248 KVEDLAQTLQVNGISAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRF 307
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C FY D K MI +P QE
Sbjct: 308 VIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAE----QEIG 363
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E + RRK++L++F
Sbjct: 364 QALLQDIVAYAETSSSRRKFILHYF 388
>gi|424664440|ref|ZP_18101476.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404576022|gb|EKA80763.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
Length = 601
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L A+DEAHC+SQWGHDFRP Y + LR P++P++A+TATA + +DI
Sbjct: 120 YLLRDMTISLFAVDEAHCISQWGHDFRPEYARMGFLRTQFPNIPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L+ P I + FDRPNL L SVK+ + K + +F + G S IIYC ++
Sbjct: 180 VRQLQLKQPEIFISSFDRPNLSL--SVKRGYQPKEKSKAIVDFIARHRGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRDEAQDNFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAEADICRRRILLSYF-------GETATEDCGNCDVCRN 392
>gi|423278476|ref|ZP_17257390.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|404586486|gb|EKA91059.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 601
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L A+DEAHC+SQWGHDFRP Y + LR P++P++A+TATA + +DI
Sbjct: 120 YLLRDMTISLFAVDEAHCISQWGHDFRPEYARMGFLRTQFPNIPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L+ P I + FDRPNL L SVK+ + K + +F + G S IIYC ++
Sbjct: 180 VRQLQLKQPEIFISSFDRPNLSL--SVKRGYQPKEKSKAIVDFIARHRGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRDEAQDDFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAEADICRRRILLSYF-------GETATEDCGNCDVCRN 392
>gi|374853612|dbj|BAL56515.1| ATP-dependent DNA helicase RecQ [uncultured Bacteroidetes
bacterium]
Length = 717
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 161/284 (56%), Gaps = 19/284 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I +A+DEAHC+S+WGHDFRP YR + LP +PI+A+TATATP V DI +L +
Sbjct: 130 QISFVAVDEAHCISEWGHDFRPEYRRIRHALRDLPPMPIIALTATATPRVQRDILENLEI 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + T F+RPNLY + K+ A L+++ + G + I+YC ++ E V +
Sbjct: 190 LDAVVFRTSFNRPNLYYQITPKRSH-QATLKEIVQYIRSRPGQAGIVYCHSRRRVEDVAN 248
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L NGI+ PYHA + R F+ + I+V+VAT AFGMGIDKPDVR VIH+ P
Sbjct: 249 ILQANGIKALPYHAGMDAATRTRNQDAFLNEEIQVIVATIAFGMGIDKPDVRFVIHFDVP 308
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT--MMKRV 367
K + YYQE GRAGRDGL + C +Y D K + L D E +++ +
Sbjct: 309 KSIENYYQETGRAGRDGLPADCILYYDYNDILKLDRF----LKDKPASEREAIVFLLQEM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRH 408
+ E CRRK+LL +F S T KC CDNCR+
Sbjct: 365 AYFCETGQCRRKFLLQYFGESYDT--------HKCNGMCDNCRY 400
>gi|254443570|ref|ZP_05057046.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
gi|198257878|gb|EDY82186.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
Length = 616
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 158/281 (56%), Gaps = 17/281 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ A+DEAHC+S+WGHDFRP YR L+ELR PD P +A+TATAT V DI L L
Sbjct: 135 KVCRFAVDEAHCISEWGHDFRPEYRQLAELRKRFPDTPFMALTATATDRVRGDIVKQLQL 194
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCPTKVICEKVC 248
DP F+RPNL KQ A R++ F FE S IIYC ++ E+
Sbjct: 195 HDPTDYVASFNRPNLAYRIEQKQ----AVFRQILKFVKSRPFE-SGIIYCFSRKATEQTA 249
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D L + G++ YHA ++ QR + F++D +KVV AT AFGMGIDKP+VR VIH
Sbjct: 250 DRLRQEGVEAIAYHAGMTPLQRAKNQDAFIRDEVKVVCATIAFGMGIDKPNVRYVIHQDI 309
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKN-NMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ YYQE GRAGRDGL S C ++ D K N I + + E+ +K ++++
Sbjct: 310 PKNIEGYYQETGRAGRDGLPSECVMYFSPGDVAKQLNFIAEKEPQEREV---AKEQLRQI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y E CRR LL++F S T E CDNC
Sbjct: 367 VNYAESSRCRRAVLLDYF---SETWKEGNC---GNCDNCNQ 401
>gi|17227701|ref|NP_484249.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
gi|17135183|dbj|BAB77729.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
Length = 718
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 169/302 (55%), Gaps = 19/302 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D+ + I + AIDEAHCVS+WGHDFRP YR L LR P+VP
Sbjct: 119 RLLSERFLPFLDL----VKEKVGISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+LA+TATAT V DI L L+ P+I F+R NLY K A+L +L +N
Sbjct: 175 VLALTATATDRVRADIIQQLGLKQPSIHLASFNRQNLYYEVRPKSKQAYAELLELIR-DN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGSTIIYC T+ E++ L ++ I YHA + +R + F++D ++V+VAT
Sbjct: 234 --EGSTIIYCLTRKKVEELTFKLQKDKISALSYHAGLPDDERSKNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+H+ P++L +YYQE GRAGRDG +S C F+ D +
Sbjct: 292 IAFGMGINKPDVRLVVHFDIPRNLESYYQESGRAGRDGEASRCTIFFSFGDIKTIEWSIE 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
D + Q +K ++++ Y E CRR L +F + P C CDNC
Sbjct: 352 QK-TDPQEQLIAKQQLRQMIDYAEGTDCRRTIQLGYF---------GERFPGNCGNCDNC 401
Query: 407 RH 408
R+
Sbjct: 402 RY 403
>gi|429741035|ref|ZP_19274704.1| ATP-dependent DNA helicase RecQ [Porphyromonas catoniae F0037]
gi|429159704|gb|EKY02201.1| ATP-dependent DNA helicase RecQ [Porphyromonas catoniae F0037]
Length = 725
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 158/294 (53%), Gaps = 31/294 (10%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L +P I A+DEAHC+S+WGHDFRP YR + L + PI+A+TATATP V
Sbjct: 128 IDLLREVP-ISFYAVDEAHCISEWGHDFRPEYRKIRSLVSEIAPRPIMALTATATPKVQH 186
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPT 240
DI +L + D + + F+RPNL K D+ D+ + L N + S I+YC
Sbjct: 187 DIMKNLGIEDAVVFQSSFNRPNLLYQIRPKTADVDRDIVRYILANPKK----SGIVYCMR 242
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + VL NGI+ PYHA + K+R E F+++ + V+VAT AFGMGIDKPDV
Sbjct: 243 RTRVETLAQVLQANGIKALPYHAGLEAKERMENQDAFIEERVDVIVATIAFGMGIDKPDV 302
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFY------KTADFTKNNMIFQPNLNDS 354
R VIHY PK L YYQE GRAGRDG VC +Y K FTK +
Sbjct: 303 RYVIHYDMPKSLEGYYQETGRAGRDGGEGVCIAYYDPNELEKLERFTKGRSVAD------ 356
Query: 355 EIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
QE ++ +++ Y E CRR +LLN+F + C CDNC
Sbjct: 357 --QEIARVLLRETADYAETTLCRRSFLLNYFG--------EHYEKENCGSCDNC 400
>gi|212693848|ref|ZP_03301976.1| hypothetical protein BACDOR_03370 [Bacteroides dorei DSM 17855]
gi|237708472|ref|ZP_04538953.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
gi|212663600|gb|EEB24174.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229457401|gb|EEO63122.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
Length = 605
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 159/285 (55%), Gaps = 20/285 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA + DI
Sbjct: 120 FLLKDIQISLFAIDEAHCISQWGHDFRPEYTQLKVLRNQFPKVPIVALTATADKITRKDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
L+L+DP I + FDRPNL L +Q D R + F E IIYC ++
Sbjct: 180 AQQLVLKDPKIFISSFDRPNLSLEVKRGYQQKD---KARTILEFIEKHKNECGIIYCMSR 236
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E V +L + GI+ YHA +S R + F+ D ++VV AT AFGMGIDK +VR
Sbjct: 237 SKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATIAFGMGIDKSNVR 296
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S QE +
Sbjct: 297 WVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL----VMLSKFATESSQQEINL 352
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 353 EKLHRMQQYAESDICRRRILLNYF-GETM---------DHDCGNC 387
>gi|423203715|ref|ZP_17190283.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER39]
gi|404612493|gb|EKB09554.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER39]
Length = 611
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 162/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELNDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+QR++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLEQRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|167765436|ref|ZP_02437549.1| hypothetical protein BACSTE_03826 [Bacteroides stercoris ATCC
43183]
gi|167697064|gb|EDS13643.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 727
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 156/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVEAQVFKSSFNRPNLYYEVRPKTANVDKDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 367 LETAAYAESSVCRRKTLLHYF-GEEYT-------EENCGNCDNC 402
>gi|330827839|ref|YP_004390791.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii B565]
gi|406674905|ref|ZP_11082097.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC35]
gi|423211489|ref|ZP_17198022.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER397]
gi|328802975|gb|AEB48174.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii B565]
gi|404613569|gb|EKB10590.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER397]
gi|404628413|gb|EKB25195.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC35]
Length = 611
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 162/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELNDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+QR++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLEQRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|325954269|ref|YP_004237929.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
gi|323436887|gb|ADX67351.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
Length = 731
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 20/293 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I AIDEAHC+S+WGHDFRP YR L + + + PI+A+TATATP V +DI +L +
Sbjct: 137 KISFFAIDEAHCISEWGHDFRPEYRNLKSIIQKIGNAPIIALTATATPKVQEDIQKTLGM 196
Query: 191 RDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKV 247
+D + F+RPNL+ + QD +++ F + +G S ++YC ++ E++
Sbjct: 197 QDARVFKDSFNRPNLFYEVRPKINQD------KEIVKFIKKRQGKSGVVYCLSRKKVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L NGI+ PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR VIHY
Sbjct: 251 TQLLQVNGIKAIPYHAGLDAKTRSKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHYD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKR 366
PK L +YYQE GRAGRDG C FY D K + + + EI ++
Sbjct: 311 IPKSLESYYQETGRAGRDGGEGECVAFYDYKDIEKLEKFLASKPVAEREI---GMQLLNE 367
Query: 367 VEKYLELRTCRRKYLLNHF-------KGSSVTVAESQVPPDKCCDNCRHNEML 412
V Y E RRK+LL++F G+ + ++ P K D R + +
Sbjct: 368 VAAYAETSMSRRKFLLHYFGEEFDEVNGAGANMDDNMRNPKKMMDATREAQQV 420
>gi|86140388|ref|ZP_01058947.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85832330|gb|EAQ50779.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 733
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 181/362 (50%), Gaps = 58/362 (16%)
Query: 29 LRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTN--NTSFLSRIPRI 86
LR ++ + H SS+ E + + + +++Y+ PE +T N FL R +I
Sbjct: 80 LRGISKENGIAHVLNSSLNKGEIKQVKEDIANGITKLLYVAPESLTKEENVEFL-RSQKI 138
Query: 87 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQW 146
+AIDEAHC+S+WGHDFRP YR L ++ I RI
Sbjct: 139 SFVAIDEAHCISEWGHDFRPEYRNLRQI--------------IKRIG------------- 171
Query: 147 GHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLY 206
D+PI+AVTATATP V +DI +L + N F+RPNLY
Sbjct: 172 ------------------DDIPIIAVTATATPKVQEDIMKNLGMSGANAFKASFNRPNLY 213
Query: 207 LAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHI 265
K ++ AD + F Q +G S IIYC ++ E++ VL NGI PYHA +
Sbjct: 214 YEIRPKTKNVDAD---IIRFVKQNQGKSGIIYCLSRKRVEELAQVLQVNGISAVPYHAGL 270
Query: 266 SLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRD 325
K R + +F+ + + VVVAT AFGMGIDKPDVR VIH+ PK + +YYQE GRAGRD
Sbjct: 271 DAKSRVKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRD 330
Query: 326 GLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLN 383
G C +Y D K M +P QE +++ V Y E RRK++L+
Sbjct: 331 GGEGHCLAYYSYKDIEKLEKFMSGKPVAE----QEIGHALLQEVVAYAETSMSRRKFILH 386
Query: 384 HF 385
+F
Sbjct: 387 YF 388
>gi|254413079|ref|ZP_05026851.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
gi|196180243|gb|EDX75235.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
Length = 731
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 159/286 (55%), Gaps = 19/286 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I A+DEAHCVS WGHDFRP YR + +LR PD+PILA+TATAT V DI L LR
Sbjct: 160 ISAFAVDEAHCVSAWGHDFRPEYRQIKQLRQRYPDIPILALTATATKRVQQDIVQQLTLR 219
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P+I F+RPNLY KQ L K +GS IIYC ++ ++V L
Sbjct: 220 QPSIHIASFNRPNLYYEIQPKQRQSYNQLFKKVQ---SHKGSGIIYCLSRRSVDEVAFRL 276
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
++GI PYHA +S R F++D ++V+VAT AFGMGI+K DVR VIHY P++
Sbjct: 277 QKDGISALPYHAGMSDIDRSSNQNRFIRDDVQVIVATIAFGMGINKLDVRFVIHYDLPRN 336
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQE GRAGRDG + C FY+ D + + + + E Q ++ ++++ Y
Sbjct: 337 LEGYYQESGRAGRDGEPAYCTIFYRPGDVPRLDYLIDQKPDPRE-QRVARQQLQQIRDYA 395
Query: 372 ELRTCRRKYLLNH----FKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
E CRR LL + FKG+ CDNC H + +E
Sbjct: 396 EGTDCRRTILLRYFGERFKGNC-----------DNCDNCCHPKPVE 430
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 164/290 (56%), Gaps = 13/290 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ + IDEAHCVSQWGHDFRP Y+ L ++R P VP++A+TATAT VI DI +L +
Sbjct: 962 KFARLVIDEAHCVSQWGHDFRPDYKTLGQVRQRYPGVPVMALTATATQNVIVDIRHNLGM 1021
Query: 191 RDPNIINTGFDRPNLYLAASVK--QDDIMADLRKL--TNFENQFEGSTIIYCPTKVICEK 246
+ F+RPNLY K D + + L + + NQ S I+Y ++ EK
Sbjct: 1022 DNCQTFCQSFNRPNLYYEVRPKTTNDKTIEAIASLVQSKYPNQ---SGIVYTISRKNAEK 1078
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V + LS++GI YHAH+ +++ E+ + + IK+VVAT AFGMGIDKPDVR V+H+
Sbjct: 1079 VAESLSQHGIAASHYHAHVDPQEKVEVQNAWQRGEIKIVVATIAFGMGIDKPDVRFVMHH 1138
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
G PK L YYQE GRAGRDG S C FY D + E +E M+ R
Sbjct: 1139 GLPKSLEGYYQETGRAGRDGKPSDCILFYGKQDIRVLKRLIADGDGSHEQKERQMAMLNR 1198
Query: 367 VEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
V + + ++ CRR +L +F G T A+ +K CDNC+ + E +
Sbjct: 1199 VTAFCDNKSDCRRAEILRYF-GEEFTGAQC----NKTCDNCKAGLIFEQQ 1243
>gi|423261207|ref|ZP_17242109.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267342|ref|ZP_17246324.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|387774449|gb|EIK36560.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392698045|gb|EIY91228.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
Length = 601
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 120 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 180 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIIDFITRHRGESGIVYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRNETQDDFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAESDICRRRILLSYF-------GETATEDCGNCDVCRN 392
>gi|423204847|ref|ZP_17191403.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC34]
gi|404625723|gb|EKB22538.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC34]
Length = 611
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 162/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELNDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+QR++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLEQRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|258647524|ref|ZP_05734993.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
gi|260852300|gb|EEX72169.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
Length = 607
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 170/307 (55%), Gaps = 17/307 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
L+ +P I L+AIDEAHCVSQWGHDFRP Y L LR P +A+TATA V DI
Sbjct: 124 LLAALP-ISLVAIDEAHCVSQWGHDFRPEYVQLGTLRKAFGSAPFMALTATADEVTRQDI 182
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
L L P + + FDRPNL L + + L+ + F G S I+YC ++
Sbjct: 183 RERLNLHSPRVFISSFDRPNLSLNV-FRGLNGAEKLKAINRFLGMRAGESGIVYCLSRKT 241
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ + L G+ RPYHA +S +R+E F+ D ++VVVAT AFGMGIDK +VR V
Sbjct: 242 TEQLAEKLEALGVSARPYHAGLSADKRRETQQAFIADQLRVVVATIAFGMGIDKSNVRWV 301
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK + +YYQEIGRAGRDG + FY AD + + +S ++E +
Sbjct: 302 IHYNLPKSIESYYQEIGRAGRDGDPADTLLFYNYADIVQ----LEKFARESHLREINLER 357
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAE------SQVPPDKCCDNCRHNEMLELEQV 417
+ R+ +Y E CRR+ LLN+F V+ A+ + PP++ D R +M L +
Sbjct: 358 LDRMREYAESNVCRRRILLNYF--GEVSAADCGNCDVCKSPPER-FDGTREAQM-ALSAI 413
Query: 418 PRGGRMV 424
R G +
Sbjct: 414 VRSGERI 420
>gi|373111502|ref|ZP_09525757.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|423131855|ref|ZP_17119530.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|423135590|ref|ZP_17123236.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|423330145|ref|ZP_17307945.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
gi|371640169|gb|EHO05774.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|371640694|gb|EHO06290.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|371640856|gb|EHO06450.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|404602617|gb|EKB02313.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
Length = 731
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 153/258 (59%), Gaps = 10/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ +AIDEAHC+S+WGHDFRP YR L + L D+PI+ +TATATP V +DI +L +
Sbjct: 137 KLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRSLGDIPIIGLTATATPKVQEDILKNLEI 196
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+ N F+RPNL+ K ++ D+ + F Q +G S +IYC ++ E++ +
Sbjct: 197 PNANTFKASFNRPNLFYEIRPKTKNVETDIIR---FIKQHQGKSGVIYCLSRKKVEEIAN 253
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR VIH+ P
Sbjct: 254 VLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIP 313
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K L +YYQE GRAGRDG C +Y D K M +P QE +++ V
Sbjct: 314 KSLESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMAGKPVAE----QEIGYALLQEV 369
Query: 368 EKYLELRTCRRKYLLNHF 385
Y E RRK++L++F
Sbjct: 370 VAYAETSMSRRKFILHYF 387
>gi|329962624|ref|ZP_08300572.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328529655|gb|EGF56553.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 727
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 156/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 132 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTATATPKVQHDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + + + F+RPNLY K ++ D+ K +N E S IIYC ++
Sbjct: 191 QKNLGMVEAQVFKSSFNRPNLYYEVRPKTANVDRDIIKF--IKNNPEKSGIIYCLSRKKV 248
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ ++L NGI R YHA + R + F+ + I V+VAT AFGMGIDKPDVR VI
Sbjct: 249 EELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVI 308
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 309 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAE--QEIGKQLL 366
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 367 LETAAYAESSVCRRKALLHYF-GEEYT-------EENCGNCDNC 402
>gi|282880882|ref|ZP_06289575.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
gi|281305264|gb|EFA97331.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
Length = 725
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 153/281 (54%), Gaps = 16/281 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I AIDEAHC+S+WGHDFRP YR + + D P++A+TATAT V DI SL +
Sbjct: 136 KISFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGDAPVIALTATATDKVRTDIKRSLGI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + F+RPNLY K DI +++ F Q EG S IIYC ++ E++ +
Sbjct: 196 ADAREFKSSFNRPNLYYEIRQKSSDID---KQIIMFIRQHEGKSGIIYCLSRKKVEELSE 252
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 253 VLKANNIKAAPYHAGLDSVTRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIP 312
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L YYQE GRAGRDG +C FY D K + Q+ + +++
Sbjct: 313 KSLEGYYQETGRAGRDGGEGICIAFYAQKDLKKLEKFMEGKPVAE--QDIGRQLLQETAA 370
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
Y E CRRK LL++F + + C CDNC H
Sbjct: 371 YAESSVCRRKMLLHYFG--------EEYLQENCHSCDNCLH 403
>gi|423270795|ref|ZP_17249766.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423274619|ref|ZP_17253565.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392698719|gb|EIY91901.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392704877|gb|EIY98011.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
Length = 601
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 120 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 180 VRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIVDFITRHRGESGIVYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL----ILLTKFATESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 354 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 392
>gi|254425231|ref|ZP_05038949.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
gi|196192720|gb|EDX87684.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
Length = 738
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 162/282 (57%), Gaps = 9/282 (3%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS+ I AIDEAHCVS+WGHDFRP YR L +++ P +PI+A+TATAT V DI
Sbjct: 133 LSQKVGISTFAIDEAHCVSEWGHDFRPEYRQLFQIKQLYPQIPIIALTATATQRVRTDIV 192
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL-RKLTNFENQFEGSTIIYCPTKVIC 244
L L DP + + F+R NLY K L K+ + + +G+ IIYC ++
Sbjct: 193 QQLRLNDPTVYISSFNRQNLYYEVIQKSRKPYQQLLAKIQQHQGKEKGAGIIYCLSRKHV 252
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
++V + L+++GI PYHA ++ QR+ F++D ++++VAT AFGMGI+KPDVR VI
Sbjct: 253 DEVSNNLTKDGISALPYHAGLTNTQRENNQTKFIRDDVQIIVATVAFGMGINKPDVRFVI 312
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY P++L +YYQE GRAGRD ++ C + D + + E Q ++ +
Sbjct: 313 HYDLPRNLESYYQESGRAGRDSEAASCTILFGWGDVHTVRYLIGQKADPGE-QRIAQQQL 371
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ Y E CRR+ LN+F E +PP CDNC
Sbjct: 372 NQIISYAESPICRRQVQLNYF-------GEQFIPPCNNCDNC 406
>gi|410029263|ref|ZP_11279099.1| ATP-dependent DNA helicase RecQ [Marinilabilia sp. AK2]
Length = 726
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 172/290 (59%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
ILFL + ++ +AIDEAHC+S+WGHDFRP YR + + L ++PI+A+TATATP V
Sbjct: 124 ILFL-KDAKLSFVAIDEAHCISEWGHDFRPEYRKIKSIIAQLGKELPIIALTATATPKVQ 182
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCP 239
DI +L + + ++ + F+R NLY K + + +K + ++Q S IIYC
Sbjct: 183 QDIQRNLQMEEADLFKSSFNRTNLYYEIRPK---LKNETKKQIIKYIKSQKGKSGIIYCL 239
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ ++L NGI+ PYHA + R + F+ + + V+VAT AFGMGIDKPD
Sbjct: 240 SRKKVEEIAELLKVNGIKAAPYHAGLDQSVRIKNQDDFLNEEVDVIVATIAFGMGIDKPD 299
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDGL C FY+ D K F + +E +E+
Sbjct: 300 VRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYRYEDIIKLEK-FNKDKPVTE-REN 357
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+K +++ + Y E CRRK+LL++F ++ + C CDNC+
Sbjct: 358 AKILLQEMAAYAESSICRRKFLLHYF---------GEILEEDCGFCDNCK 398
>gi|340351994|ref|ZP_08674884.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
gi|339615729|gb|EGQ20399.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
Length = 727
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 18/283 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI SL +
Sbjct: 136 KVSFYAIDEAHCISEWGHDFRPEYRKIRQAVDLIGKAPIIALTATATDKVRTDIVKSLGI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + F+RPNLY K+++ + R++ F Q G S IIYC ++ E++
Sbjct: 196 EDCAEFKSSFNRPNLYYEVRSKKNEEDTN-RQIIKFIKQNPGKSGIIYCLSRKKVEELAA 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL N I+ PYHA + + R F+ + I V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 255 VLQANDIKAEPYHAGLDSETRSRTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K L YYQE GRAGRDG C FY D K N M +P Q+ + +++
Sbjct: 315 KSLEGYYQETGRAGRDGEEGQCIVFYSKNDLKKLENFMDGKPVAE----QDIGRQLLQET 370
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
E Y E CRRK LL++F P D C CDNC H
Sbjct: 371 ETYAESSVCRRKLLLHYFG--------EDYPKDNCGMCDNCLH 405
>gi|406659948|ref|ZP_11068084.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
gi|405556351|gb|EKB51290.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
Length = 726
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 172/290 (59%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
ILFL + ++ +AIDEAHC+S+WGHDFRP YR + + + + +PI+A+TATATP V
Sbjct: 124 ILFL-KDAKLSFVAIDEAHCISEWGHDFRPEYRKIKSIIAQVGESLPIIALTATATPKVQ 182
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCP 239
DI +L + + ++ + F+R NLY K I + +K + + +G S IIYC
Sbjct: 183 QDIQRNLHMEEADLYKSSFNRTNLYYEVRPK---IKNETKKQIIKYIKSHKGKSGIIYCL 239
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ D+L NGI+ PYHA + R + F+ + + V+VAT AFGMGIDKPD
Sbjct: 240 SRKKVEEIADLLKVNGIKAAPYHAGLDQSVRIKNQDDFLNEEVDVIVATIAFGMGIDKPD 299
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDGL C FY+ D K F + +E +E+
Sbjct: 300 VRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYRYEDIIKLEK-FNKDKPVTE-REN 357
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+K +++ + Y E CRRK+LL++F ++ D C CDNC+
Sbjct: 358 AKVLLQEMAAYAESSICRRKFLLHYF---------GELLEDDCGFCDNCK 398
>gi|423239789|ref|ZP_17220905.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392645829|gb|EIY39552.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
Length = 605
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 158/285 (55%), Gaps = 20/285 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA + DI
Sbjct: 120 FLLKDIQISLFAIDEAHCISQWGHDFRPEYTQLKVLRNQFPKVPIVALTATADKITRKDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
L L+DP I + FDRPNL L +Q D R + F E IIYC ++
Sbjct: 180 AQQLALKDPKIFISSFDRPNLSLEVKRGYQQKD---KARTILEFIEKHKNECGIIYCMSR 236
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E V +L + GI+ YHA +S R + F+ D ++VV AT AFGMGIDK +VR
Sbjct: 237 SKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATIAFGMGIDKSNVR 296
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S QE +
Sbjct: 297 WVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL----VMLSKFATESSQQEINL 352
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 353 EKLHRMQQYAESDICRRRILLNYF-GETM---------DHDCGNC 387
>gi|265751367|ref|ZP_06087430.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|345514773|ref|ZP_08794279.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|423228784|ref|ZP_17215190.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423247595|ref|ZP_17228644.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|229437610|gb|EEO47687.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|263238263|gb|EEZ23713.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|392631925|gb|EIY25892.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392635523|gb|EIY29422.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
Length = 605
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 158/285 (55%), Gaps = 20/285 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA + DI
Sbjct: 120 FLLKDIQISLFAIDEAHCISQWGHDFRPEYTQLKVLRNQFPKVPIVALTATADKITRKDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
L L+DP I + FDRPNL L +Q D R + F E IIYC ++
Sbjct: 180 AQQLALKDPKIFISSFDRPNLSLEVKRGYQQKD---KARTILEFIEKHKNECGIIYCMSR 236
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E V +L + GI+ YHA +S R + F+ D ++VV AT AFGMGIDK +VR
Sbjct: 237 SKTESVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATIAFGMGIDKSNVR 296
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S QE +
Sbjct: 297 WVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL----VMLSKFATESSQQEINL 352
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+++Y E CRR+ LLN+F G ++ D C NC
Sbjct: 353 EKLHRMQQYAESDICRRRILLNYF-GETM---------DHDCGNC 387
>gi|145297285|ref|YP_001140126.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362038|ref|ZP_12962682.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142850057|gb|ABO88378.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686673|gb|EHI51266.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 607
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 161/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 134 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 192
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 193 HRLELNDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 249
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L QR++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 250 EVAERLSRHGSKAAPYHAGLPLAQRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 309
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 310 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 368
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 369 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 399
>gi|373957711|ref|ZP_09617671.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373894311|gb|EHQ30208.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 731
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 189/384 (49%), Gaps = 64/384 (16%)
Query: 28 ELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTN--NTSFLSRIPR 85
+LR + HF SS+T +E + +++Y+ PE +T N FL R+
Sbjct: 79 QLRAFGGSDSIAHFLNSSLTKSEITKVKEDVLSGKTKLLYVAPESLTKQENIDFL-RLNS 137
Query: 86 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQ 145
+ +A+DEAHC+S+WGHDFRP YR + ++ +S
Sbjct: 138 VSFVAVDEAHCISEWGHDFRPEYRKIRQV----------------------------ISN 169
Query: 146 WGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNL 205
G ++PI+A+TATATP V DI +L + + I + F+R NL
Sbjct: 170 IGE-----------------NIPIIALTATATPKVQQDIQKNLQMNNATIYKSSFNRGNL 212
Query: 206 YLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAH 264
+ K++ L+++ F Q G S IIYC ++ E+V + LS NG++ PYHA
Sbjct: 213 FYEVRAKRN----VLKEIVRFVKQHTGKSGIIYCLSRKKVEEVAEALSLNGVKALPYHAG 268
Query: 265 ISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGR 324
+ K R + F+ + + V+VAT AFGMGIDKPDVR VIH+ PK + YYQE GRAGR
Sbjct: 269 LDAKVRADTQDRFLMEDVDVIVATIAFGMGIDKPDVRYVIHHDVPKSMEGYYQETGRAGR 328
Query: 325 DGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH--SKTMMKRVEKYLELRTCRRKYLL 382
DG VC FY D K Q + D + E ++K V Y E CRRK +L
Sbjct: 329 DGGEGVCLAFYSEKDIDK----LQKFMKDKPVAEREIGTQILKEVIDYAESAVCRRKQIL 384
Query: 383 NHFKGSSVTVAESQVPPDKCCDNC 406
++F G + A CDNC
Sbjct: 385 HYF-GENFNEAGCNC----MCDNC 403
>gi|387771794|ref|ZP_10127951.1| ATP-dependent DNA helicase RecQ [Haemophilus parahaemolyticus
HK385]
gi|386908179|gb|EIJ72877.1| ATP-dependent DNA helicase RecQ [Haemophilus parahaemolyticus
HK385]
Length = 601
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 160/279 (57%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I IA+DEAHCVSQWGHDFRP Y L LR P++P++A+TATA P DI L L
Sbjct: 133 KISFIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNIPLMALTATADPTTRADILLHLRL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
+P+ FDRPN+ K + +L F Q S I+YC ++ E++ +
Sbjct: 193 NEPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFIAGQKGKSGIVYCNSRKKVEEITE 248
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 249 KLSARNISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATVAFGMGINKSNVRFVVHFDLP 308
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ V
Sbjct: 309 RSIESYYQETGRAGRDDLPSQAVMFYDPADYAWLQKMLLEEPESEQRDIKQHK---LQAV 365
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 366 GAFAESQTCRRLVLLNYF-------GESRREPCKNCDIC 397
>gi|336398037|ref|ZP_08578837.1| ATP-dependent DNA helicase RecQ [Prevotella multisaccharivorax DSM
17128]
gi|336067773|gb|EGN56407.1| ATP-dependent DNA helicase RecQ [Prevotella multisaccharivorax DSM
17128]
Length = 740
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 163/288 (56%), Gaps = 22/288 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCL-------SELRLPLPDVPILAVTATATPVVIDD 183
+I IA+DEAHC+S+WGHDFRP YR + ++ R + +P++A+TATAT V D
Sbjct: 134 KISFIAVDEAHCISEWGHDFRPEYRNIKPTIDKIAKAR-QVEHIPVIALTATATDKVRMD 192
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKV 242
I T+L + D + F+RPNLY K D D ++ F Q G S IIYC ++
Sbjct: 193 IKTNLGMADAKEFKSSFNRPNLYYEVRQKVSDEDTD-SQIIKFIKQHSGKSGIIYCLSRK 251
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ L NG + PYHA + + R F+K+ I ++VAT AFGMGIDKPDVR
Sbjct: 252 KVEELAKKLCLNGFRAAPYHAGLDNEVRARTQDDFLKENIDIIVATIAFGMGIDKPDVRF 311
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK L YYQE GRAGRDG +C FY D K + F + +++E +E +
Sbjct: 312 VIHYDIPKSLEGYYQETGRAGRDGGEGICLAFYSPKDLKKLSK-FMDSKSETE-KEIGRQ 369
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+++ + Y E CRRK LLN+F P D C CDNC+H
Sbjct: 370 LLEETQAYAETAVCRRKVLLNYFG--------ELYPRDNCDNCDNCKH 409
>gi|265765824|ref|ZP_06093865.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|263253492|gb|EEZ24957.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
Length = 607
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 126 YLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQFPNVPMIALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L LR P I + FDRPNL L SVK+ + K + +F + G S I+YC ++
Sbjct: 186 IRQLQLRQPQIFISSFDRPNLSL--SVKRGYQPKEKSKAIIDFITRHRGESGIVYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL----ILLTKFATESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 360 KLNRMQQYAESDICRRRILLSYF-------GETTTEDCGNCDVCRN 398
>gi|149908521|ref|ZP_01897183.1| ATP-dependent DNA helicase RecQ [Moritella sp. PE36]
gi|149808355|gb|EDM68292.1| ATP-dependent DNA helicase RecQ [Moritella sp. PE36]
Length = 606
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 171/299 (57%), Gaps = 22/299 (7%)
Query: 111 LSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL 170
LS RL + D + +L + P I L AIDEAHC+S WGHDFRP Y L +L+ P VP++
Sbjct: 119 LSPERLMVGDF-LQYLQQFP-ISLFAIDEAHCISSWGHDFRPEYNELGKLKQLFPHVPMM 176
Query: 171 AVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF 230
A+TATA DI L + +P + + FDRPN+ + K L +L + Q
Sbjct: 177 ALTATADDATRADILNQLQMHEPKVSMSSFDRPNIRYSLVEK----FKALDQLKRYVKQQ 232
Query: 231 EG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATC 289
+G S I+YC ++ E+V + L+R G +PYHA +S ++R++ F++D + +VVAT
Sbjct: 233 DGVSGIVYCTSRKRVEEVAEGLARAGFDAKPYHAGLSQQERQDTQETFIRDELDIVVATV 292
Query: 290 AFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQP 349
AFGMGI+KP+VR V+HY PK++ +YYQE GRAGRDGL + + AD + + +
Sbjct: 293 AFGMGINKPNVRFVVHYDLPKNIESYYQETGRAGRDGLPAEALLMFDPADIMRVRYMVEQ 352
Query: 350 NLNDSE--IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
N+ + ++ H M + E +TCRR+ LLN+F + D+ C NC
Sbjct: 353 TENEQQQRVEMHKLNTMV---AFAEAQTCRRQVLLNYFGEFN----------DRSCGNC 398
>gi|227540043|ref|ZP_03970092.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
gi|227240118|gb|EEI90133.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
Length = 729
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 167/288 (57%), Gaps = 16/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
I FL I + +A+DEAHC+S+WGHDFRP YR + ++ + + +PI+A+TATATP V
Sbjct: 129 IEFLRHIT-VSFVAVDEAHCISEWGHDFRPEYRKIRQVINGIGENIPIIALTATATPKVQ 187
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L + D + + F+R NLY K++ + +R + N + + I+YC ++
Sbjct: 188 SDIRKNLQMTDATLFKSSFNRTNLYYEVRTKKNVVKEIVRFIKNNSGK---TGIVYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +VL+ NGI+ PYHA + K R + F+ + ++V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEEIAEVLNINGIKALPYHAGLDAKTRADTQDKFLMEDVEVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIH+ PK + YYQE GRAGRDG VC TFY D K + D + E
Sbjct: 305 YVIHHDIPKSMEGYYQETGRAGRDGGEGVCVTFYSEKDVEK----LTKFMKDKPVSEREI 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++K V Y E CRRK +L++F G + + + CDNC+
Sbjct: 361 GTQILKEVIDYSESAVCRRKQILHYF-GENF----DEAGCNNMCDNCK 403
>gi|313677434|ref|YP_004055430.1| ATP-dependent DNA helicase recQ [Marivirga tractuosa DSM 4126]
gi|312944132|gb|ADR23322.1| ATP-dependent DNA helicase RecQ [Marivirga tractuosa DSM 4126]
Length = 725
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 163/287 (56%), Gaps = 19/287 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + I AIDEAHC+S+WGHDFRP YR + + + ++PI+A+TATATP V DI
Sbjct: 130 FLKQ-ANISFAAIDEAHCISEWGHDFRPEYRRIKSILQQISNIPIIALTATATPKVQLDI 188
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVI 243
+L + + N+ + F+R NLY K ++L F N+ +G +IYC ++
Sbjct: 189 QKNLNMEEANVFKSSFNRENLYYEVRPKN----QAKKQLIRFLNERKGKCGVIYCLSRKK 244
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ + L+ NG PYHA + R + F+ + + ++VAT AFGMGIDKPDVR V
Sbjct: 245 VEEIAEFLNVNGFNAAPYHAGLEGATRMKNQDDFLNEDVDIIVATIAFGMGIDKPDVRFV 304
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK + YYQE GRAGRDGL C FY D K F + +E +E++K +
Sbjct: 305 IHYDTPKSVEGYYQETGRAGRDGLVGDCLMFYSYNDILKLEK-FNKDKPVTE-KENAKLL 362
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ + Y E CRRK LL++F + D C CDNCRH
Sbjct: 363 LEEMSSYAESSVCRRKQLLHYF---------GEEFADYCGKCDNCRH 400
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 167/296 (56%), Gaps = 18/296 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R R+ I IDEAHCVSQWGHDFRP Y+ L E+R LP VP++A+TATAT V D+
Sbjct: 854 LNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPGVPMMALTATATENVKVDVI 913
Query: 186 TSLMLRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + I F+RPNL + K +++ ++ + T++ N+ S IIYC ++
Sbjct: 914 HNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENIADIIKTSYPNK---SGIIYCLSR 970
Query: 242 VICEKVCDVL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
CE V + L S++ I+ YHA + +R E+ + + V+VAT AFGMGIDKPDV
Sbjct: 971 KTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVHVIVATIAFGMGIDKPDV 1030
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIH+ PK L YYQE GRAGRDG S CY +Y D T + + +
Sbjct: 1031 RFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSIMSMIDKGEGGKQQKNRQ 1090
Query: 361 KTMMKRVEKY-LELRTCRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCRHNEMLE 413
+ M++ V +Y L L CRR +L +F E P D K CDNCR + + E
Sbjct: 1091 RQMLRNVMQYCLNLADCRRVQILAYFN-------EYFRPIDCNKSCDNCRSDGIFE 1139
>gi|333029342|ref|ZP_08457403.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332739939|gb|EGJ70421.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 727
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 154/282 (54%), Gaps = 11/282 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL I +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLKSI-KISFYAVDEAHCISEWGHDFRPEYRRIRPIIDEIGKAPLIALTATATPKVQHDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D + + F+RPNLY K D+ D+ + +N S IIYC ++
Sbjct: 190 QKNLGIVDAKVFKSSFNRPNLYYEVKAKTKDVDKDV--ILFIKNNPNKSGIIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ +L NGI R YHA + R + F+ + + V+VAT AFGMGIDKPDVR V+
Sbjct: 248 EELTKILQANGINARSYHAGMDAATRNQNQDDFLMERVDVIVATIAFGMGIDKPDVRFVL 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 308 HYDMPKSLEGYYQETGRAGRDGGEGKCVTFYSNKDLQKLEKFMQGKPVAE--QEIGKQLL 365
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Y E CRRK LL++F + +V + CDNC
Sbjct: 366 LDTAAYAESSLCRRKSLLHYFG------EDYEVENCEHCDNC 401
>gi|261880042|ref|ZP_06006469.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
gi|270333282|gb|EFA44068.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
Length = 742
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 162/294 (55%), Gaps = 24/294 (8%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD----------VPILAVTATATPVV 180
RI AIDEAHC+S+WGHDFRP YR + P D PI+A+TATAT V
Sbjct: 136 RISFYAIDEAHCISEWGHDFRPEYRNIR----PTIDKIASSRGEKRAPIIALTATATDKV 191
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCP 239
DI SL + D + F+RPNLY K + AD ++ F Q EG S IIYC
Sbjct: 192 RSDIKKSLGIVDARDFKSSFNRPNLYYEVRQKASEEDAD-SQIIRFLKQHEGKSGIIYCL 250
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ L NG + PYHA + + R + F+++ I ++VAT AFGMGIDKPD
Sbjct: 251 SRKKVEELSKKLQINGYKAAPYHAGLDTEVRTQTQDDFLREDIDIIVATIAFGMGIDKPD 310
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDG C FY D K F N ++E +E
Sbjct: 311 VRFVIHYDIPKSLEGYYQETGRAGRDGGEGRCIAFYSPKDLKKLEK-FTDNKGEAE-KEI 368
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
S+ +++ + Y E CRRK+LL++F G T + CDNC+H + E
Sbjct: 369 SRQLLEETKAYAESSVCRRKFLLHYF-GEEYTKENCE-----NCDNCKHPQKTE 416
>gi|312129258|ref|YP_003996598.1| ATP-dependent DNA helicase recq [Leadbetterella byssophila DSM
17132]
gi|311905804|gb|ADQ16245.1| ATP-dependent DNA helicase RecQ [Leadbetterella byssophila DSM
17132]
Length = 773
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 169/286 (59%), Gaps = 18/286 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDD 183
FL + +I +A+DEAHC+S+WGHDFRP YR + ++ + +PI+A+TATATP V D
Sbjct: 131 FLKK-AKISFVAVDEAHCISEWGHDFRPEYRKIKDIIENIDTALPIVALTATATPKVQLD 189
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKV 242
I SL + D I T F+R NLY KQ+ ++L F +Q G S I+YC ++
Sbjct: 190 IKKSLNMDDSVIFKTSFNRANLYYEVRPKQNA----KKQLIKFVSQNRGKSGIVYCLSRK 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ ++L+ NG + PYHA + + R + F+ + +VVAT AFGMGIDKPDVR
Sbjct: 246 KVEEIAELLNVNGFKALPYHAGLDPEVRMKNQDAFLNENCDIVVATIAFGMGIDKPDVRF 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY APK L YYQE GRAGRDG+ C FY D TK F + N +E ++++K
Sbjct: 306 VVHYDAPKSLEGYYQETGRAGRDGIDGTCLMFYALDDITKLEK-FNKDKNVTE-RDNAKA 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD-KCCDNCR 407
++ + Y L CRR+ LL++F Q+ D CDNC+
Sbjct: 364 LLMEMVAYSSLGVCRRRQLLSYFG--------EQMEKDCGFCDNCK 401
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 167/296 (56%), Gaps = 18/296 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R R+ I IDEAHCVSQWGHDFRP Y+ L E+R LP VP++A+TATAT V D+
Sbjct: 854 LNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPGVPMMALTATATENVKVDVI 913
Query: 186 TSLMLRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + I F+RPNL + K +++ ++ + T++ N+ S IIYC ++
Sbjct: 914 HNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENIADIIKTSYPNK---SGIIYCLSR 970
Query: 242 VICEKVCDVL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
CE V + L S++ I+ YHA + +R E+ + + V+VAT AFGMGIDKPDV
Sbjct: 971 KTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVHVIVATIAFGMGIDKPDV 1030
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIH+ PK L YYQE GRAGRDG S CY +Y D T + + +
Sbjct: 1031 RFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSIMSMIDKGEGGKQQKNRQ 1090
Query: 361 KTMMKRVEKY-LELRTCRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCRHNEMLE 413
+ M++ V +Y L L CRR +L +F E P D K CDNCR + + E
Sbjct: 1091 RQMLRNVMQYCLNLADCRRVQILAYFN-------EYFRPIDCNKSCDNCRSDGIFE 1139
>gi|406901072|gb|EKD43834.1| hypothetical protein ACD_72C00100G0005 [uncultured bacterium]
Length = 619
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 164/282 (58%), Gaps = 25/282 (8%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L AIDEAHC+S WGHDFRP YR LS L+ PDVP +A+TATA + DDI L L+
Sbjct: 133 ISLFAIDEAHCISSWGHDFRPEYRMLSSLKKDFPDVPTIALTATADNLTRDDILNKLKLK 192
Query: 192 DPNIINTGFDRPNLYLAASVKQ---DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVC 248
+P+I + F+RPN+ + K+ ++I++ L+K S IIY ++ EK+
Sbjct: 193 NPSIFVSSFNRPNINYSVEPKRKMYEEIVSYLKK------HRSDSGIIYVLSRNSAEKMA 246
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ L ++G +PYHA ++ ++R+ +F+KD +K++VAT AFGMGI+K +VR VIH
Sbjct: 247 EKLKKDGFSTKPYHAGLNNEKRQRHQEMFIKDQVKIMVATIAFGMGINKSNVRFVIHADL 306
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ +YYQE GRAGRDGL S +Y D K + + N + + H + M
Sbjct: 307 PKNIESYYQETGRAGRDGLKSEAILYYSGGDVVKLKRFAMVENNPEQTRVMLHKLSQMAT 366
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ E CRR+ +LN+F + PDKC CD C
Sbjct: 367 L---CEANACRRRAILNYF---------GEEAPDKCDSCDVC 396
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 168/302 (55%), Gaps = 15/302 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ IDEAHCVSQWGHDFRP Y+ L LR P VP +A+TATATP V DI L +
Sbjct: 800 LARFVIDEAHCVSQWGHDFRPDYKKLQLLRKNYPKVPTMALTATATPRVRTDILHQLGMT 859
Query: 192 DPNIINTGFDRPNL-YLAASVKQDDIMADLRKLT--NFENQFEGSTIIYCPTKVICEKVC 248
+P + F+RPNL Y+ S K + ++ ++ +F N I+YC ++ C+
Sbjct: 860 NPKWFMSSFNRPNLHYVVTSKKGKNSTEEIIEMIKRDFRND---CGIVYCLSRKDCDSFA 916
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D + NGI+ YHA +S QR EI G ++ + IKVV AT AFGMGIDKP+VR VIH
Sbjct: 917 DTMKSNGIKALSYHAGLSDHQRLEIQGRWISEQIKVVCATIAFGMGIDKPNVRFVIHATL 976
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKN-NMIFQPNLNDSEIQEHSKTMMKRV 367
PK + YYQE GRAGRDG ++ C FY D ++ MI + ++ E Q+ + ++
Sbjct: 977 PKSIEGYYQESGRAGRDGENAECILFYHYGDMMRHRKMIEGDSTSNWEAQKTHMDNLFKI 1036
Query: 368 EKYLELRT-CRRKYLLNHFK---GSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRM 423
+ E +T CRR LN+F S+ +A Q CDNCR+ E V +
Sbjct: 1037 VAFCENKTDCRRGLQLNYFGEMFDRSICIARKQT----TCDNCRNQGRFVNEDVTENAKA 1092
Query: 424 VV 425
+V
Sbjct: 1093 LV 1094
>gi|342865489|gb|EGU71814.1| hypothetical protein FOXB_17670 [Fusarium oxysporum Fo5176]
Length = 1563
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 166/288 (57%), Gaps = 13/288 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I IDEAHCVSQWGHDFRP Y+ L E+R P VP++A+TATAT VI DI L +
Sbjct: 935 KLSRIVIDEAHCVSQWGHDFRPDYKTLGEVRQKYPGVPVMALTATATQNVIVDIRHILGM 994
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDI--MADLRKL--TNFENQFEGSTIIYCPTKVICEK 246
+ + F+RPNL+ K + M ++ L + + NQ S I+Y ++ EK
Sbjct: 995 DNCQTFSQSFNRPNLHYEVRGKTTNAKCMDEIASLIMSKYANQ---SGIVYTVSRKNAEK 1051
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V + LS GI R YHA + +++ E+ + + +K+VVAT AFGMGIDKPDVR VIH+
Sbjct: 1052 VAESLSIQGITARHYHAGLDPQEKVEVQTSWQQGQVKIVVATIAFGMGIDKPDVRFVIHH 1111
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
G PK L YYQE GRAGRDG S C FY D + ++E +E +M+ R
Sbjct: 1112 GLPKTLEGYYQETGRAGRDGDPSDCILFYGKQDIRILKKLIADGEGNNEQKERQMSMLNR 1171
Query: 367 VEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
V + + ++ CRR +L +F G + A+ + K CDNCR + E
Sbjct: 1172 VTAFCDNKSDCRRVEILRYF-GEDFSAAQCR----KTCDNCRAGLIFE 1214
>gi|299141494|ref|ZP_07034630.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
gi|298576830|gb|EFI48700.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
Length = 725
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 164/304 (53%), Gaps = 21/304 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + ++ AIDEAHC+S+WGHDFRP YR + + PI+A+TATAT V +I
Sbjct: 131 FLQSV-KVSFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGTAPIIALTATATDKVRSNI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+R NLY K +D+ +++ F Q EG S IIYC ++
Sbjct: 190 KKSLGITDAKEFKSSFNRANLYYEVRPKTNDVD---KQIIKFIRQHEGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELAEVLKANEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 307 IHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYAQKDLKKLEKFMEGKPVAE--QDIGRQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGG 421
++ Y E CRRK LL++F + P D C CDNC H + E++ G
Sbjct: 365 LQETAAYAESSVCRRKMLLHYFG--------EEYPHDNCHNCDNCLHPK----EKIEAGK 412
Query: 422 RMVV 425
+V+
Sbjct: 413 ALVI 416
>gi|163756913|ref|ZP_02164021.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
gi|161323149|gb|EDP94490.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
Length = 732
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 182/363 (50%), Gaps = 60/363 (16%)
Query: 29 LRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTN--NTSFLSRIPRI 86
LR + + H SS+T AE++ + + +++Y+ PE +T N +FL
Sbjct: 80 LRGISSQDGIAHVLNSSLTKAETRQVKEDITNGITKLLYVAPESLTKEENVAFL------ 133
Query: 87 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQW 146
R +I +A+DEAHC+S+W
Sbjct: 134 -----------------------------------------RTVQISFMAVDEAHCISEW 152
Query: 147 GHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNL 205
GHDFRP YR L + + D +PI+ +TATATP V +DI +L + D N F+RPNL
Sbjct: 153 GHDFRPEYRNLKNIIGKIGDNIPIIGLTATATPKVQEDILKNLGMTDANTFKASFNRPNL 212
Query: 206 YLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAH 264
Y K D+ AD+ + F Q +G S I+YC ++ E++ VL NGI PYHA
Sbjct: 213 YYEVRPKTKDVDADIIR---FIKQNQGKSGIVYCLSRKRVEELAQVLQVNGINAVPYHAG 269
Query: 265 ISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGR 324
+ K+R + +F+ + VVVAT AFGMGIDKPDVR VIH+ PK + +YYQE GRAGR
Sbjct: 270 LDPKKRAKHQDMFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGR 329
Query: 325 DGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLL 382
DG C FY D K M +P QE +++ V Y E RRK++L
Sbjct: 330 DGGEGHCLAFYAYKDIEKLEKFMSGKPVAE----QEIGHALLQEVVAYAETSISRRKFIL 385
Query: 383 NHF 385
++F
Sbjct: 386 HYF 388
>gi|373501519|ref|ZP_09591870.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
gi|371948172|gb|EHO66059.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
Length = 727
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 162/291 (55%), Gaps = 23/291 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDV---PILAVTATATPVVI 181
FL + +I AIDEAHC+S+WGHDFRP YR +R + ++ PI+A+TATAT V
Sbjct: 131 FLKTV-KISFYAIDEAHCISEWGHDFRPEYR---RIRFAIDEICKAPIIALTATATDKVR 186
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPT 240
DI SL + D + F+RPNLY K+ D + R+L F Q G S IIYC +
Sbjct: 187 TDIIKSLCIDDCKEFKSSFNRPNLYYEVRPKRSDEDTN-RQLIRFIRQHAGKSGIIYCLS 245
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ VL N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDV
Sbjct: 246 RRKVEELAAVLQANDIKAAPYHAGLDSETRSKTQDGFLMEEIDVIVATIAFGMGIDKPDV 305
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIHY PK L YYQE GRAGRDG +C TFY D K + + QE
Sbjct: 306 RFVIHYNIPKSLEGYYQETGRAGRDGEEGICITFYSQKDLKKLDKFMEGKPVAE--QEIG 363
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD---KCCDNCRH 408
+ ++ E Y E CRR+ LL++F ++ P+ + CDNC H
Sbjct: 364 RQLLHETEAYAESSVCRRRLLLHYF---------GEIYPNPNCEMCDNCLH 405
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 166/294 (56%), Gaps = 14/294 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R R+ I IDEAHCVSQWGHDFRP Y+ L E+R LP VP++A+TATAT V D+
Sbjct: 856 LNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPGVPMMALTATATENVKVDVI 915
Query: 186 TSLMLRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + I F+RPNL + K +++ ++ + T++ N+ S IIYC ++
Sbjct: 916 HNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENIADIIKTSYPNK---SGIIYCLSR 972
Query: 242 VICEKVCDVL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
CE V + L S++ I+ YHA + +R E+ + + V+VAT AFGMGIDKPDV
Sbjct: 973 KTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVHVIVATIAFGMGIDKPDV 1032
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIH+ PK L YYQE GRAGRDG S CY +Y D T + + +
Sbjct: 1033 RFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSIMSMIDKGEGGKQQKNRQ 1092
Query: 361 KTMMKRVEKY-LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ M++ V +Y L L CRR +L +F Q +K CDNC+ N + E
Sbjct: 1093 RQMLRNVMQYCLNLADCRRVQILAYF-----NEYFRQNDCNKSCDNCKSNGIFE 1141
>gi|429724940|ref|ZP_19259801.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
gi|429151402|gb|EKX94270.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
Length = 728
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 160/291 (54%), Gaps = 14/291 (4%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL + R+ IA+DEAHC+S+WGHDFRP YR L + + VPI+A+TATAT
Sbjct: 126 DSFVDFLKTV-RVSFIAVDEAHCISEWGHDFRPEYRKLRPIINEIGQVPIIALTATATDK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCP 239
V DI +L + + + F+RPNLY V+Q D + +N S IIYC
Sbjct: 185 VRMDIKKNLGIPEALEFKSSFNRPNLYY--EVRQKTAKVDYDVIRFIKNHPHVSGIIYCL 242
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ +VL N I YHA + + R F+K+ I V+VAT AFGMGIDKPD
Sbjct: 243 SRKRVEELTEVLRTNDINACAYHAGLDAQVRSNTQDAFLKEDIDVIVATIAFGMGIDKPD 302
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDG +C FY D K F SE Q+
Sbjct: 303 VRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYSHKDLQKLEK-FMEGKPISE-QDI 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ ++K Y E CRRK LL++F E PD C CDNC+H
Sbjct: 361 GRQLLKETAAYAESAVCRRKLLLHYF-------GEQYESPDGCGNCDNCKH 404
>gi|150003035|ref|YP_001297779.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212690531|ref|ZP_03298659.1| hypothetical protein BACDOR_00013 [Bacteroides dorei DSM 17855]
gi|237708012|ref|ZP_04538493.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|265754201|ref|ZP_06089390.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294775659|ref|ZP_06741167.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|319642190|ref|ZP_07996850.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|345515920|ref|ZP_08795417.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|345518199|ref|ZP_08797654.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|423229918|ref|ZP_17216323.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423241571|ref|ZP_17222683.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|423247008|ref|ZP_17228059.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|423314860|ref|ZP_17292792.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149931459|gb|ABR38157.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212666880|gb|EEB27452.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229436550|gb|EEO46627.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|229457998|gb|EEO63719.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|254836466|gb|EET16775.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|263234910|gb|EEZ20465.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294450503|gb|EFG18995.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|317386176|gb|EFV67095.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|392632709|gb|EIY26667.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|392633769|gb|EIY27707.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392641157|gb|EIY34942.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392681042|gb|EIY74404.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 726
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 154/284 (54%), Gaps = 15/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLKGV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTATATPKVRMDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L ++D + F+RPNLY K ++I D+ K G IIYC ++
Sbjct: 190 QKNLGMQDAQEFKSSFNRPNLYYEVRSKTNNIDRDIIKFIKANPGKSG--IIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ +VL NGI R YHA + R F+K+ I V+VAT AFGMGIDKPDVR VI
Sbjct: 248 EELAEVLQANGINARAYHAGMDSATRTANQDGFLKEDIDVIVATIAFGMGIDKPDVRFVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDG C TFY D K Q QE K ++
Sbjct: 308 HYDIPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVAE--QEIGKQLL 365
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F G T + C CDNC
Sbjct: 366 LETAAYAESSICRRKSLLHYF-GEEYT-------EENCGNCDNC 401
>gi|332707801|ref|ZP_08427828.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
gi|332353504|gb|EGJ33017.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
Length = 709
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 167/310 (53%), Gaps = 25/310 (8%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLI---AIDEAHCVSQWGHDFRPSYRCLSELRLPLP 165
R L+E +P FL R+ + I AIDEAHCVSQWGHDFRP YR L LR P
Sbjct: 119 RLLAEQFIP-------FLDRVRSQIGIPTFAIDEAHCVSQWGHDFRPDYRQLKLLRNRYP 171
Query: 166 DVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTN 225
+ +LA+TATAT V DI L LR P + F+RPNLY KQ L K
Sbjct: 172 NSSVLALTATATNRVQQDIIQQLELRQPKVHIASFNRPNLYYDVQPKQRQSYQQLLKQIR 231
Query: 226 FENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVV 285
+GS I+YC ++ E+V L +GI PYH ++ K R F++D ++V+
Sbjct: 232 ---SHQGSGIVYCTSRRSVEEVAFRLQNDGISALPYHGGMTDKARATNQNRFIRDDVRVI 288
Query: 286 VATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNM 345
VAT AFGMGI+KPDVR VIHY P+++ +YYQE GRAGRDG + C Y +D +K +
Sbjct: 289 VATVAFGMGINKPDVRFVIHYDLPRNIESYYQESGRAGRDGEPATCTVLYSASDISKLHY 348
Query: 346 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--C 403
+ + E Q + + ++ Y E CRR+ LL +F + P C C
Sbjct: 349 LIDQKPDPKE-QRIAYQQLNQIVDYAEGTDCRRRILLGYF---------GERFPGNCEKC 398
Query: 404 DNCRHNEMLE 413
DNC + + LE
Sbjct: 399 DNCCYPKPLE 408
>gi|260591259|ref|ZP_05856717.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
gi|260537124|gb|EEX19741.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
Length = 727
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 156/287 (54%), Gaps = 15/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI
Sbjct: 131 FLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRYAIDTIGAAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K+ D +++ F Q G S IIYC ++
Sbjct: 190 IRSLGIEDCAEFKSSFNRPNLYYEVRAKRSDDDTS-KQIIKFIKQHTGKSGIIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ PYHA + + R + F+ + + V+VAT AFGMGIDKPDVR V
Sbjct: 249 VEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 309 IHYDIPKSLEGYYQETGRAGRDGKEGICIVFYSKNDLKKLEKFMEGKPVAE--QDIGRQL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ E Y E CRRK LL++F + P D C CDNC H
Sbjct: 367 LQETEAYAESSVCRRKMLLHYFG--------EEYPKDNCCMCDNCLH 405
>gi|313148719|ref|ZP_07810912.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313137486|gb|EFR54846.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 607
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 164/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L A+DEAHC+SQWGHDFRP Y + LR P+VP++A+TATA + +DI
Sbjct: 126 YLLRDMTISLFAVDEAHCISQWGHDFRPEYARMGFLRTQFPNVPMIALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNF-ENQFEGSTIIYCPTKV 242
L L+ P I + FDRPNL L SVK+ + K + +F + S IIYC ++
Sbjct: 186 VRQLQLKQPEIFISSFDRPNLSL--SVKRGYQPKEKSKAIVDFIARHRDESGIIYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKHGIRCGVYHAGLSARQRDEAQDDFINDRIEVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL----ILLTKFATESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E CRR+ LL++F E+ CD CR+
Sbjct: 360 KLNRMQQYAEADICRRRILLSYF-------GETATEDCGNCDVCRN 398
>gi|383810866|ref|ZP_09966350.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356505|gb|EID34005.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
Length = 727
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 156/287 (54%), Gaps = 15/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI
Sbjct: 131 FLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRYAIDTIGAAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K+ D +++ F Q G S IIYC ++
Sbjct: 190 IRSLGIEDCAEFKSSFNRPNLYYEVRAKRSDDDTS-KQIIKFIKQHTGKSGIIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ PYHA + + R + F+ + + V+VAT AFGMGIDKPDVR V
Sbjct: 249 VEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 309 IHYDIPKSLEGYYQETGRAGRDGEEGICIVFYSKNDLKKLEKFMEGKPVAE--QDIGRQL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ E Y E CRRK LL++F + P D C CDNC H
Sbjct: 367 LQETEAYAESSVCRRKMLLHYFG--------EEYPKDNCCMCDNCLH 405
>gi|340348782|ref|ZP_08671813.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
gi|339613206|gb|EGQ17991.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
Length = 727
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 163/292 (55%), Gaps = 19/292 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI SL +
Sbjct: 136 KVSFYAIDEAHCISEWGHDFRPEYRKIRQAIDQIGKAPIIALTATATDKVRTDIVKSLGI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + F+RPNLY K+++ + R++ F Q G S IIYC ++ E++
Sbjct: 196 EDCAEFKSSFNRPNLYYEVRPKKNEEDTN-RQIIKFIKQNLGKSGIIYCLSRKKVEELAA 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 255 VLQANDIKAAPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K L YYQE GRAGRDG C FY D K N M +P Q+ + +++
Sbjct: 315 KSLEGYYQETGRAGRDGEEGKCIVFYSKNDLKKLENFMEGKPVAE----QDIGRQLLQET 370
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH-NEMLELEQ 416
E Y E CRRK LL++F G T D C CDNC H E +E +Q
Sbjct: 371 ETYAESSVCRRKLLLHYF-GEEYT-------KDNCGMCDNCLHPKEKIEAKQ 414
>gi|386389497|ref|ZP_10074311.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
gi|385695267|gb|EIG25829.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
Length = 601
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 159/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I IA+DEAHCVSQWGHDFRP Y L LR P++P++A+TATA P DI L L
Sbjct: 133 KISFIAVDEAHCVSQWGHDFRPEYTLLGNLRNTFPNIPLMALTATADPTTRADILHHLRL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F Q S I+YC ++ E++ +
Sbjct: 193 NDPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFIAGQKGKSGIVYCNSRKKVEEITE 248
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 249 KLSARNISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 308
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 309 RSIESYYQETGRAGRDDLPSQAVMFYDPADYAWLQKMLLEEPESEQRDIKQHK---LQAI 365
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E + CRR LLN+F ES+ P K CD C
Sbjct: 366 GAFAESQICRRLVLLNYF-------GESRQEPCKNCDIC 397
>gi|358064746|ref|ZP_09151308.1| hypothetical protein HMPREF9473_03371 [Clostridium hathewayi
WAL-18680]
gi|356697081|gb|EHI58678.1| hypothetical protein HMPREF9473_03371 [Clostridium hathewayi
WAL-18680]
Length = 813
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 152/265 (57%), Gaps = 14/265 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLM 189
+I +IA+DEAHCVSQWG DFRPSY + E LP P+L A TATAT V DDI LM
Sbjct: 129 KISMIAVDEAHCVSQWGQDFRPSYLRILEFVERLPVRPVLSAFTATATKEVRDDIIDILM 188
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVC 248
LR+P ++ TGFDRPNLY +D L N+ +G S +IYC T+ + E+VC
Sbjct: 189 LREPTVLTTGFDRPNLYFGVQSPKDKYAC----LKNYLETHQGESGVIYCLTRKVVEEVC 244
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ L R+G YHA +S +RK+ F+ D ++VAT AFGMGIDK +VR V+HY
Sbjct: 245 EKLRRDGYPVTRYHAGLSDGERKQNQEDFIYDRYPLMVATNAFGMGIDKSNVRFVVHYNM 304
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQEHS 360
PK++ +YYQE GRAGRDG + C Y D N N ++ E + E
Sbjct: 305 PKNMESYYQEAGRAGRDGEPAECILLYGGQDVVTNQFFIDNNQDNQELDAVTRAIVMERD 364
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +K++ Y C R Y+L +F
Sbjct: 365 RDRLKKMTYYCFTNECLRDYILRYF 389
>gi|257413601|ref|ZP_05591716.1| ATP-dependent DNA helicase RecQ [Roseburia intestinalis L1-82]
gi|257203023|gb|EEV01308.1| ATP-dependent DNA helicase RecQ [Roseburia intestinalis L1-82]
Length = 639
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 174/323 (53%), Gaps = 17/323 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++ +DEAHC+SQWG DFRPSY +++ LP P++ A TATAT V DI SL L
Sbjct: 107 ISMVTVDEAHCISQWGQDFRPSYLEIADFLARLPRRPVVSAFTATATERVKQDITGSLHL 166
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
++P + TGFDRPNL+ ++ D L + + S IIYC TK + VC++
Sbjct: 167 QNPVTVVTGFDRPNLFFRVVKRKGGKETDNSILNYVKRHEDESGIIYCATKKNVDSVCEL 226
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L ++GI YHA +SL++RKE F D I+V+VAT AFGMGIDK +VR V+HY P+
Sbjct: 227 LLQHGILAGRYHAGLSLEERKESQDDFTYDRIRVMVATNAFGMGIDKSNVRYVLHYNMPQ 286
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-------DSEIQEHSKTM 363
L YYQE GRAGRDG + C F+ D N + + D ++ + +
Sbjct: 287 SLEYYYQEAGRAGRDGEEAECVLFFSKQDIMINKRLLDYKASEGGYTAGDPAVRANEQRK 346
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRM 423
+ ++ Y E C R+Y+LN+F S + E C NC E E GR
Sbjct: 347 LNQMIHYCETDECLRQYILNYFGDHSPCICEK-------CSNCVVTEDEAEENYIETGRA 399
Query: 424 VVENSEVWMSTEARPGREAFEFL 446
+ +E+ TE G+E FE L
Sbjct: 400 KKKTAELADLTE--EGQELFEKL 420
>gi|427727826|ref|YP_007074063.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
gi|427363745|gb|AFY46466.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
Length = 718
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 167/305 (54%), Gaps = 15/305 (4%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D L +I I + AIDEAHCVS+WGHDFRP YR L LR P+VP
Sbjct: 119 RLLSERFLPFLD---LVHEKIG-ISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+LA+TATAT V DI L L+ P+I F+R NLY K A+L +L
Sbjct: 175 MLALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRAKSKQAYAELLELIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ E++ L + I PYHA + +R + F++D ++V+VAT
Sbjct: 232 DTEGSVIIYCLTRKKVEELTFKLQNDKIAVLPYHAGLPDAERSQNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+H+ P++L +YYQE GRAGRDG S C F+ AD +
Sbjct: 292 IAFGMGINKPDVRLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFADIKTIEWSIE 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
E Q ++ ++++ Y E CRR L +F E CDNCR+
Sbjct: 352 QKTEPQE-QLIARQQLRQMIDYAEGTDCRRTIQLGYF-------GERFAGNCGNCDNCRY 403
Query: 409 NEMLE 413
+ LE
Sbjct: 404 PKPLE 408
>gi|322514973|ref|ZP_08067985.1| ATP-dependent helicase RecQ [Actinobacillus ureae ATCC 25976]
gi|322119026|gb|EFX91190.1| ATP-dependent helicase RecQ [Actinobacillus ureae ATCC 25976]
Length = 602
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 162/279 (58%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFR Y L LR P+VP++A+TATA P DI L L
Sbjct: 134 KISLIAVDEAHCVSQWGHDFRSEYTLLGNLRNTFPNVPLMALTATADPTTRHDILQHLRL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F ++ G S I+YC ++ E++ +
Sbjct: 194 TDPHTYLGSFDRPNIRYTVQEK----FKPMEQLAKFISKQHGKSGIVYCNSRKKVEEITE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA +S++QR+ + F +D I+VVVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLAARKISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY AD+ + ++ +P +I++H ++ +
Sbjct: 310 RSIESYYQETGRAGRDDLPSEAVLFYDPADYAWLQKVLLEEPESKQRDIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P K CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQEPCKNCDIC 398
>gi|239625286|ref|ZP_04668317.1| ATP-dependent DNA helicase RecQ [Clostridiales bacterium
1_7_47_FAA]
gi|239519516|gb|EEQ59382.1| ATP-dependent DNA helicase RecQ [Clostridiales bacterium 1_7_47FAA]
Length = 824
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 166/320 (51%), Gaps = 30/320 (9%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVT 173
RL D L +I ++A+DEAHCVSQWG DFRPSY + + LP PI+ A T
Sbjct: 115 RLMSEDFLRFALDGRVKISMVAVDEAHCVSQWGQDFRPSYLKIVDFINQLPVRPIVSAFT 174
Query: 174 ATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG- 232
ATAT V DDI LMLR+PN++ TGFDR NLY A +D L N+ + +G
Sbjct: 175 ATATAEVRDDIIDILMLRNPNVMTTGFDRSNLYFAVQSPKDKYAT----LVNYLERHKGE 230
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
S IIYC T+ + E+VC L R G YHA +S +RK F+ D +++VAT AFG
Sbjct: 231 SGIIYCLTRKVVEEVCSQLMREGFSMTRYHAGLSDSERKRNQEDFIYDRAQIMVATNAFG 290
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDK +VR V+HY PK++ +YYQE GRAGRDG S C Y D N N +
Sbjct: 291 MGIDKSNVRFVVHYNMPKNMESYYQEAGRAGRDGEPSECILLYGGQDVVTNQFFIDHNQD 350
Query: 353 DSE--------IQEHSKTMMKRVEKYLELRTCRRKYLLNHFK--GSS------------- 389
+ + E + ++++ Y C R Y+L +F GS+
Sbjct: 351 NEALDPVTREIVMERDRERLRKMTFYCFTNECLRDYILRYFGEYGSNYCGNCSNCLSQFE 410
Query: 390 -VTVAESQVPPDKCCDNCRH 408
V V E C +NCR
Sbjct: 411 EVDVTEIARALIGCVENCRQ 430
>gi|402846704|ref|ZP_10895013.1| putative ATP-dependent DNA helicase RecQ [Porphyromonas sp. oral
taxon 279 str. F0450]
gi|402267396|gb|EJU16791.1| putative ATP-dependent DNA helicase RecQ [Porphyromonas sp. oral
taxon 279 str. F0450]
Length = 539
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 159/289 (55%), Gaps = 21/289 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L IP I A+DEAHC+S+WGHDFRP YR + + + D PI+A+TATATP V
Sbjct: 128 IKLLQEIP-ISFYAVDEAHCISEWGHDFRPEYRRIRAIVTEIADRPIMALTATATPKVQH 186
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPT 240
DI +L + + + F+RPNL K + D+ + L+N + S I+YC
Sbjct: 187 DIMKNLGMESAAVFQSSFNRPNLLYRIHPKTAESERDIVRYILSNPKK----SGIVYCMR 242
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ + +VL NGI+ PYHA + K+R E F+++ +V+VAT AFGMGIDKPDV
Sbjct: 243 RTQVMNLTEVLQANGIKALPYHAGLDAKERAENQDAFIEERAEVIVATIAFGMGIDKPDV 302
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEH 359
R VIH+ PK L YYQE GRAGRDG VC +Y D K ++ D EI
Sbjct: 303 RYVIHFDMPKSLEGYYQETGRAGRDGGEGVCIAYYDHDDLEKLERFTKGKSVADQEI--- 359
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ +++ Y E CRR +LLN+F + + C CDNC
Sbjct: 360 ARALLRETADYAETSICRRSFLLNYFG--------ERYEAENCGSCDNC 400
>gi|358398791|gb|EHK48142.1| hypothetical protein TRIATDRAFT_262699 [Trichoderma atroviride IMI
206040]
Length = 1621
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 161/287 (56%), Gaps = 7/287 (2%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ IDEAHCVSQWGHDFRP Y+ L +LR P+VP++A+TATAT VI DI +L +
Sbjct: 883 KFARFVIDEAHCVSQWGHDFRPDYKNLGQLRSKFPNVPVMALTATATQNVIVDIKYNLGM 942
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+ + + F+RPNLY K + + + + +++ T I+Y ++ E V +
Sbjct: 943 INCQVFSQSFNRPNLYYEVRPKGSNPVVTQQIASLINSKYRNVTGIVYTISRKQAEDVAE 1002
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS NGI R YHA I+ ++ E+ + K IKVVVAT AFGMGIDKPDVR V+H+G P
Sbjct: 1003 KLSNNGIAARHYHAQITPAEKVEVQQAWQKGQIKVVVATIAFGMGIDKPDVRFVMHHGIP 1062
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L YYQE GRAGRDG S C FY AD + + +E M+ RV
Sbjct: 1063 KSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKRLIIDGEGSKDQKERQMVMLNRVTA 1122
Query: 370 YLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+ + + CRR +L +F G ++ K CDNC+ + E +
Sbjct: 1123 FCDNKADCRRTEVLRYF-GEDFHPSQCH----KTCDNCQAGLVFEQQ 1164
>gi|218438410|ref|YP_002376739.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
gi|218171138|gb|ACK69871.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
Length = 709
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 166/304 (54%), Gaps = 23/304 (7%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE P D +++ I AIDEAHCVS+WGHDFRP YR L +LR P+VP
Sbjct: 120 RLLSEKFTPFLDT----IAQQVGISAFAIDEAHCVSEWGHDFRPEYRQLRQLRKRYPNVP 175
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+ A+TATAT V DI L L++P I F+R NLY K+ +L +
Sbjct: 176 MFALTATATKRVQQDIILQLDLKNPGIHIASFNRTNLYYDIKPKEK---RSYNQLLKYIR 232
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+GS I+YC ++ +++ L +GI PYHA ++ + R F++D ++V+VAT
Sbjct: 233 AHQGSGIVYCMSRRNVDEIAFRLQNDGISALPYHAGLTDEARTLNQTRFIRDDVRVMVAT 292
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+H+ P++L +YYQE GRAGRDG + C Y D K I +
Sbjct: 293 VAFGMGINKPDVRFVVHFDLPRNLESYYQESGRAGRDGEPAKCLLLYSLGDLKKIEYIIE 352
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRR----KYLLNHFKGSSVTVAESQVPPDKCCD 404
N E Q+ ++ +++V Y E CRR +Y FKG+ CD
Sbjct: 353 QKTNPQE-QKIARQQLRQVIDYAEGTECRRTIVLRYFGERFKGNC-----------NNCD 400
Query: 405 NCRH 408
NCRH
Sbjct: 401 NCRH 404
>gi|427409907|ref|ZP_18900109.1| ATP-dependent DNA helicase RecQ [Sphingobium yanoikuyae ATCC 51230]
gi|425712040|gb|EKU75055.1| ATP-dependent DNA helicase RecQ [Sphingobium yanoikuyae ATCC 51230]
Length = 590
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 151/286 (52%), Gaps = 23/286 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R ++ L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DI
Sbjct: 124 LLRSAKVALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADAHTRKDIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + + +I +GFDRPN+ A V D + R+L + G ++Y PT+ E
Sbjct: 184 VQLGIPEDGLIISGFDRPNIRYA--VHPRDGLT--RQLADLLAANPGPGVVYAPTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ + L R G R YHA + QR F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAETLGRGGRAVRAYHAGMDPAQRAANQAAFIASEDMVMVATVAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNN---MIFQPNLNDSEIQEHSKT 362
G PK + YYQE GRAGRDG ++ + F+ DF + M +P Q+ +
Sbjct: 300 AGLPKSIEGYYQESGRAGRDGEPAIAHLFWGAEDFARARQRIMELEPAR-----QQGERA 354
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + +E TCRR LL HF + PP C CDNC
Sbjct: 355 RIAALGALVETATCRRAILLRHF---------GENPPATCGNCDNC 391
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 177/314 (56%), Gaps = 17/314 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ + I IDEAHCVSQWGHDFRP Y+ LS LR P VPILA+TATAT V +DI +L +
Sbjct: 130 KFMRIVIDEAHCVSQWGHDFRPDYKELSILRKNFPSVPILALTATATEKVRNDIILNLNM 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTKVICEKVC- 248
+ P F+RPNLY K D+ + + + Q+ + S IIYC +K CEK+
Sbjct: 190 KKPVCFKQSFNRPNLYYHVMKKPKDVSKQMAEF--IKKQYPDKSGIIYCLSKYDCEKISG 247
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D+ + GI++ YHA + + R ++ + K IKV+VAT AFGMGI+KPDVR V H+
Sbjct: 248 DLNTEYGIKSAYYHAGMEIHSRNQVQDRWQKGRIKVIVATIAFGMGINKPDVRFVFHHSI 307
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-----SKTM 363
PK L YYQE GRAGRDGL S C +YK AD + + L+ E H SKT
Sbjct: 308 PKSLEGYYQESGRAGRDGLKSHCILYYKWADKLRIETLIM--LSSKENGTHYNLKESKTN 365
Query: 364 MKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGR 422
+ ++ Y E T CRR L++F G ++ K CDNC + + + V + +
Sbjct: 366 LNKMVSYCENDTDCRRSLQLSYF-GEKFDKSKC----GKTCDNCSLDSPISEKDVTQEAK 420
Query: 423 MVVENSEVWMSTEA 436
+V+ E +TE
Sbjct: 421 EIVKIVEKVGNTET 434
>gi|445120845|ref|ZP_21379373.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
gi|444839226|gb|ELX66305.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
Length = 594
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 163/292 (55%), Gaps = 19/292 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI SL +
Sbjct: 3 KVSFYAIDEAHCISEWGHDFRPEYRKIRQAIDQIGKAPIIALTATATDKVRTDIVKSLGI 62
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + F+RPNLY K+++ + R++ F Q G S IIYC ++ E++
Sbjct: 63 EDCAEFKSSFNRPNLYYEVRPKKNEEDTN-RQIIKFIKQNLGKSGIIYCLSRKKVEELAA 121
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 122 VLQANDIKAAPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIP 181
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K L YYQE GRAGRDG C FY D K N M +P Q+ + +++
Sbjct: 182 KSLEGYYQETGRAGRDGEEGKCIVFYSKNDLKKLENFMEGKPVAE----QDIGRQLLQET 237
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH-NEMLELEQ 416
E Y E CRRK LL++F G T D C CDNC H E +E +Q
Sbjct: 238 ETYAESSVCRRKLLLHYF-GEEYT-------KDNCGMCDNCLHPKEKIEAKQ 281
>gi|340621987|ref|YP_004740439.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
gi|339902253|gb|AEK23332.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
Length = 729
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 157/264 (59%), Gaps = 10/264 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDD 183
FL I I +A+DEAHC+S+WGHDFRP YR + + L + +P++A+TATATP V DD
Sbjct: 132 FLKTID-ISFVAVDEAHCISEWGHDFRPEYRNIKTIIDRLGEGIPVVALTATATPKVQDD 190
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +L + + N+ F+RPNLY K ++ AD+ + ++ G IIYC ++
Sbjct: 191 ILKNLGMAEANVFKASFNRPNLYYEVRPKTKNVDADIIRFVKQHSKKSG--IIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V
Sbjct: 249 VEELSQTLQVNGITAVPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IH+ PK + +YYQE GRAGRDG C FY D K M+ +P QE +
Sbjct: 309 IHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMVGKPIAE----QEIGQ 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y E + RRK++L++F
Sbjct: 365 ALLQDIVAYAETSSSRRKFILHYF 388
>gi|291538230|emb|CBL11341.1| ATP-dependent DNA helicase, RecQ family [Roseburia intestinalis
XB6B4]
Length = 639
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 173/323 (53%), Gaps = 17/323 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++ +DEAHC+SQWG DFRPSY +++ LP P++ A TATAT V DI SL L
Sbjct: 107 ISMVTVDEAHCISQWGQDFRPSYLEIADFLARLPRRPVVSAFTATATERVKQDITGSLHL 166
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
++P + TGFDRPNL+ ++ D L + + S IIYC TK + VC++
Sbjct: 167 QNPVTVVTGFDRPNLFFRVVKRKGGKETDNSILNYVKRHEDESGIIYCATKKNVDSVCEL 226
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L ++GI YHA +SL++RKE F D I+V+VAT AFGMGIDK +VR V+HY P+
Sbjct: 227 LLQHGILAGRYHAGLSLEERKESQDDFTYDRIRVMVATNAFGMGIDKSNVRYVLHYNMPQ 286
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ-------PNLNDSEIQEHSKTM 363
L YYQE GRAGRDG + C F+ D N + D ++ + +
Sbjct: 287 SLEYYYQEAGRAGRDGEEAECVLFFSKQDIMINKRLLDYKATEGGYTAGDPAVRANEQRK 346
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRM 423
+ ++ Y E C R+Y+LN+F S + E C NC E E GR
Sbjct: 347 LNQMIHYCETDECLRQYILNYFGDHSPCICEK-------CSNCVVTEDEAEENYIETGRA 399
Query: 424 VVENSEVWMSTEARPGREAFEFL 446
+ +E+ TE G+E FE L
Sbjct: 400 KKKTAELADLTE--EGQELFEKL 420
>gi|304383399|ref|ZP_07365865.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
gi|304335567|gb|EFM01831.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
Length = 726
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 160/287 (55%), Gaps = 13/287 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL + +I AIDEAHC+S+WGHDFRP YR + L + P++A+TATAT V
Sbjct: 130 VSFLKGV-KISFYAIDEAHCISEWGHDFRPEYRRIRPLINEIGIAPVIALTATATDKVRT 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D + F+RPNLY K DI +++ F Q +G S I+YC ++
Sbjct: 189 DIKKNLGIADAKEFKSSFNRPNLYYEVRAKTQDID---KQIIKFIRQHQGKSGIVYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL N I+ PYHA + +R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 246 KTVEELAAVLCANDIKAAPYHAGLDSAKRSQTQDAFLMERIDVIVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG +C TFY D K F +E Q+ +
Sbjct: 306 FVIHYDIPKSLEGYYQETGRAGRDGGEGLCITFYSNNDLRKLEK-FMEGKPVAE-QDIGR 363
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+++ Y E CRRK LL++F G + A CDNC H
Sbjct: 364 QLLQETAAYAESSVCRRKMLLHYF-GETYEKANC-----GNCDNCLH 404
>gi|255531959|ref|YP_003092331.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
gi|255344943|gb|ACU04269.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
Length = 729
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 171/293 (58%), Gaps = 16/293 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
++ +I +A+DEAHC+S+WGHDFRP YR + ++ L + +PI+A+TATATP V DI
Sbjct: 133 KLIKISFVAVDEAHCISEWGHDFRPEYRKIRQVISGLGEGIPIIALTATATPKVQQDIIK 192
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
+L + D + + F+RPNL+ K+D ++ ++ + + G IIYC ++ E+
Sbjct: 193 NLGMSDATLFKSSFNRPNLFYEIRPKRD-VLKEIIRYIKYNTGKSG--IIYCLSRKKVEE 249
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V + L+ NGI+ PYHA + K R E F+ + ++V+VAT AFGMGIDKPDVR VIH+
Sbjct: 250 VAESLNLNGIKALPYHAGLEPKVRAETQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHH 309
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH--SKTMM 364
PK + YYQE GRAGRDG VC FY D K + D + E ++
Sbjct: 310 DIPKSMEGYYQETGRAGRDGGEGVCIAFYAQKDVDK----LAKFMKDKPVSEREIGTQIL 365
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH-NEMLELEQ 416
K V Y E CRRK +L++F G + ++ + CDNC+ ++ E E+
Sbjct: 366 KEVIDYAESGVCRRKQILHYF-GENF----NETGCNCMCDNCKKPKKLFEAEE 413
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 159/286 (55%), Gaps = 19/286 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHCVS+WGHDFRP YR + +LR PD+PILA+TATAT V DI L LR
Sbjct: 186 ISAFAIDEAHCVSEWGHDFRPEYRQMKQLRQRYPDIPILALTATATKRVQQDILEQLTLR 245
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P I F+RPNLY K+ L K +GS I+YC ++ ++V L
Sbjct: 246 QPGIHIASFNRPNLYYEVQPKERHSYNQLLKKIK---SHKGSGIVYCLSRRAVDEVAFRL 302
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
++GI PYHA +S + R F++D ++V+VAT AFGMGI+KPDVR VIHY P +
Sbjct: 303 QKDGIDALPYHAGMSDEARATNQTRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPHN 362
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQE GRAGRDG + C F+ + + + + + E Q ++ +++V Y
Sbjct: 363 LERYYQESGRAGRDGEPAHCTLFFGAGNIRTIDYLIEQKPDPKE-QRVARQQLRQVIDYA 421
Query: 372 ELRTCRR----KYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
E CRR +Y FKG+ CDNCR+ + +E
Sbjct: 422 EGTDCRRTIQLRYFGERFKGNCGN-----------CDNCRNPKPVE 456
>gi|449446630|ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
gi|449488107|ref|XP_004157941.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
Length = 729
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 165/304 (54%), Gaps = 28/304 (9%)
Query: 125 FLSRIPRIV------LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
F++++ +I LIAIDEAHC+S WGHDFRPSYR LS LR LP++PILA+TATA P
Sbjct: 144 FMAKLMKIYSRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVP 203
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYC 238
V D+ SL L +P ++ + F+RPN+Y K ++ + IIYC
Sbjct: 204 KVQKDVIISLGLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYC 263
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
+ +C+++ L++ GI YHA + + RK + ++ I+VVVAT AFGMGID+
Sbjct: 264 LERAMCDQLSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRK 323
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ---------- 348
DVR V H+ PK + A+YQE GRAGRD L S +Y D + I +
Sbjct: 324 DVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKIL 383
Query: 349 PNLNDSEIQ-EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CD 404
P+ + E Q E S T ++ +Y E CRRK +L F QVP C CD
Sbjct: 384 PSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFG--------EQVPASICSRSCD 435
Query: 405 NCRH 408
C+H
Sbjct: 436 ACKH 439
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 165/307 (53%), Gaps = 19/307 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D L I AIDEAHCVS+WGHDFRP YR + ++R P +P
Sbjct: 127 RLLSERFLPFLDQVAASLG----ISAFAIDEAHCVSEWGHDFRPDYRQILQVRDRYPHIP 182
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
I+A+TATAT V DI L LR+P I F+RPNLY K A+L ++ +
Sbjct: 183 IMALTATATDRVRLDIMQQLALREPYIHVASFNRPNLYYEVRAKTKHSFAELLQIIDKNG 242
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
GS IIYC ++ +++ L + GI PYHA ++ R F++D ++++VAT
Sbjct: 243 ---GSGIIYCLSRKNVDELAYKLQQVGISALPYHAGLNDSDRTSNQTRFIRDDVQIMVAT 299
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+HY P++L YYQE GRAGRDG + C F D + +
Sbjct: 300 VAFGMGINKPDVRFVVHYNLPRNLEGYYQESGRAGRDGEPAQCILFLGYGDRKTIEYLIE 359
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ E Q + +RV Y E CRR L++F + P C CDNC
Sbjct: 360 QKPDPQE-QRIATQQFRRVIDYAEASDCRRTIQLSYF---------GEAFPGNCSQCDNC 409
Query: 407 RHNEMLE 413
R+ + LE
Sbjct: 410 RNQKPLE 416
>gi|365122666|ref|ZP_09339566.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363642172|gb|EHL81539.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 726
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 158/287 (55%), Gaps = 17/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 129 IEFLKQV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGSHPLIALTATATPKVQH 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D + + F+RPNLY K +I D+ K ++Q S IIYC ++
Sbjct: 188 DIQKNLGMIDAEVFKSSFNRPNLYYEVRPKTQNIDRDIIKY--IKSQSGKSGIIYCLSRK 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ + L NGI PYHA + R + F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 246 KVEELAETLKVNGINALPYHAGMDSATRTQNQDAFLLEKVDVIVATIAFGMGIDKPDVRF 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C TFY D K Q + + EI K
Sbjct: 306 VIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYINKDLQKLEKFMQGKPIAEQEI---GK 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ Y E CRRK LL++F + + C CDNC
Sbjct: 363 QLLLETAAYAESSVCRRKLLLHYFG--------EEYGEENCGNCDNC 401
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 163/289 (56%), Gaps = 28/289 (9%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVS+WGHDFRP YR L ++R P+VP++A+TATAT V D+ L LR P +
Sbjct: 151 IDEAHCVSEWGHDFRPEYRQLLQIRQRFPEVPVMALTATATDRVRQDMGEQLALRQPYVH 210
Query: 197 NTGFDRPNLYLAASVKQ----DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLS 252
F+RPNLY K D+++ +R + EGS I+YC ++ ++ L
Sbjct: 211 IASFNRPNLYYEVRPKGKNSYDELLQKIRHV-------EGSCIVYCLSRRRVNELTTRLQ 263
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
+ GI+ PYHA +S R E F++D ++V+VAT AFGMGI+KPDVR V+HY P+++
Sbjct: 264 QEGIEALPYHAGLSDDVRTENQTRFIRDDVRVIVATIAFGMGINKPDVRLVMHYDLPRNI 323
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND------SEIQEHSKTMMKR 366
AYYQE GRAGRDG ++ C FY D + I ++ + Q ++ +++
Sbjct: 324 EAYYQESGRAGRDGETAQCLLFYGPGDIKSLDWIIDQKVHPVTGEPLEQEQRIARQQLRQ 383
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
V Y E CRR L++F + P C CDNC H + LE
Sbjct: 384 VIDYAESTVCRRTIQLSYF---------GEEFPGNCQNCDNCLHPKPLE 423
>gi|423198737|ref|ZP_17185320.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila SSU]
gi|404629927|gb|EKB26652.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila SSU]
Length = 611
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 162/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L+DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELQDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+ R++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|302308466|ref|NP_985391.2| AFL159Wp [Ashbya gossypii ATCC 10895]
gi|299790644|gb|AAS53215.2| AFL159Wp [Ashbya gossypii ATCC 10895]
Length = 1323
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 16/300 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L R ++ I +DEAHCVS WGHDFRP Y+ L ++ PD+P+LA+TATA+ V
Sbjct: 679 IQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKVEYPDIPMLALTATASEQVRM 738
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTK 241
DI +L L++P + F+R NLY K + + D+ + + +F+G T IIYC +K
Sbjct: 739 DIIHNLHLKEPVFLKQSFNRSNLYYEVLRKDKNSLKDISH--SIKTRFKGQTGIIYCHSK 796
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE+ ++ +G++ YHA + +R I + D I+V+ AT AFGMGIDKPDVR
Sbjct: 797 NSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSDKIQVICATVAFGMGIDKPDVR 856
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHS 360
V HY P+ L YYQE GRAGRDG S C +Y D + Q + N D E +E
Sbjct: 857 FVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDVRNIQSMIQKDKNLDRENKEKH 916
Query: 361 KTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLELEQ 416
T +++V +Y E T CRR+ +L++F Q +C CDNC++ +E E+
Sbjct: 917 LTKLQQVMQYCENTTDCRRQLVLSYFN--------EQFSSQECSKNCDNCQNGSNVEYEE 968
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 163/286 (56%), Gaps = 13/286 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR L ++ + +VP++A+TATATP V DDI
Sbjct: 132 FLKEV-KISFFAIDEAHCISEWGHDFRPEYRNLKQIIDKIANVPVIALTATATPKVQDDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + + + F+RPNLY K + D +++ F NQ +G S I+YC ++
Sbjct: 191 QKTLGMTNALVFKESFNRPNLYYEVRPK---VNVD-KEIVKFINQHKGKSGIVYCLSRRK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ +L NGI PYHA + K R F+ + + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKT 362
IHY PK L +YYQE GRAGRDG C FY D K + Q +++ EI
Sbjct: 307 IHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI---GLQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++ V Y E RR+Y+L +F G S + + + CDN +
Sbjct: 364 LLNEVVGYAETSMSRRQYILYYF-GESFDPVKGEGA--RMCDNSSN 406
>gi|374108619|gb|AEY97525.1| FAFL159Wp [Ashbya gossypii FDAG1]
Length = 1323
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 16/300 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L R ++ I +DEAHCVS WGHDFRP Y+ L ++ PD+P+LA+TATA+ V
Sbjct: 679 IQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKVEYPDIPMLALTATASEQVRM 738
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTK 241
DI +L L++P + F+R NLY K + + D+ + + +F+G T IIYC +K
Sbjct: 739 DIIHNLHLKEPVFLKQSFNRSNLYYEVLRKDKNSLKDISH--SIKTRFKGQTGIIYCHSK 796
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE+ ++ +G++ YHA + +R I + D I+V+ AT AFGMGIDKPDVR
Sbjct: 797 NSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSDKIQVICATVAFGMGIDKPDVR 856
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHS 360
V HY P+ L YYQE GRAGRDG S C +Y D + Q + N D E +E
Sbjct: 857 FVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDVRNIQSMIQKDKNLDRENKEKH 916
Query: 361 KTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLELEQ 416
T +++V +Y E T CRR+ +L++F Q +C CDNC++ +E E+
Sbjct: 917 LTKLQQVMQYCENTTDCRRQLVLSYFN--------EQFSSQECSKNCDNCQNGSNVEYEE 968
>gi|410942002|ref|ZP_11373794.1| ATP-dependent DNA helicase, RecQ family [Leptospira noguchii str.
2006001870]
gi|410782996|gb|EKR71995.1| ATP-dependent DNA helicase, RecQ family [Leptospira noguchii str.
2006001870]
Length = 624
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 161/295 (54%), Gaps = 19/295 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDD 183
LS+ P + IA+DEAHCVSQWGHDFRP YR L ELR P +P++A+TATAT VI D
Sbjct: 134 ILSKFP-LARIAVDEAHCVSQWGHDFRPEYRKLYELRDKYPKPIPVIALTATATSKVIKD 192
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYC 238
I SL L +P +I F R NL + Q++I + L KL NF+ G I+YC
Sbjct: 193 ISNSLGLNNPTLIKGSFYRENLRFSVRFPQNEISRENELLKLLIQGNFQKISSGRAIVYC 252
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
T+ E V L +NG + YHA + R+ + V+VAT AFGMG+DKP
Sbjct: 253 ATRQKVETVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNVLVATNAFGMGLDKP 312
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR V+HY P L +YYQE GRAGRDG SS C FY +D I N ++
Sbjct: 313 DVRLVVHYQVPASLESYYQEAGRAGRDGKSSDCVLFYHPSDLVTQGFIIGKENN----RK 368
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+T++ +++Y CR++ L ++F + +V P K CD C E E
Sbjct: 369 GGETLLSHLKEYSISNKCRQQTLCSYF--------DEEVLPCKTCDICLAKESAE 415
>gi|326514896|dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 167/305 (54%), Gaps = 28/305 (9%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L+AIDEAHC+S WGHDFRPSYR +S LR PD+PILA+TATA P V D+ +SL L+
Sbjct: 157 LGLVAIDEAHCISTWGHDFRPSYRKISSLRKQFPDIPILALTATAVPKVQKDVISSLSLQ 216
Query: 192 DPNIINTGFDRPNLYLAASVKQ--DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+P I+ F+RPN++ K DD+ +D+ L +IIYC + C+ +
Sbjct: 217 NPVILKASFNRPNIFYEVRYKDLLDDVFSDISNLLKSSGNV--CSIIYCLERAACDDLTM 274
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS+ GI + YHA ++ K R + ++ +VVVAT AFGMGID+ DVR V H+ P
Sbjct: 275 HLSQQGISSAAYHAGLNSKVRTTVLDDWLSSRTQVVVATVAFGMGIDRHDVRIVCHFNLP 334
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIF--------QPNLNDSEIQEHSK 361
K + ++YQE GRAGRD S +Y D + I QP + +E+ E +
Sbjct: 335 KSMESFYQESGRAGRDQQPSRSVLYYGLEDRRRMEFILRNSSSRKQQPPSSSTELSEKTL 394
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRH-----NEMLE 413
++ Y E TCRRK ++ F +V P C CD C+H + + +
Sbjct: 395 ADFSQIVDYCESSTCRRKKIIESFG--------EKVQPTLCQRTCDACKHPNQVASRLED 446
Query: 414 LEQVP 418
L +VP
Sbjct: 447 LRRVP 451
>gi|345882276|ref|ZP_08833781.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
gi|343918032|gb|EGV28804.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
Length = 725
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 168/306 (54%), Gaps = 21/306 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL I +I A+DEAHC+S+WGHDFRP YR + + + + P++A+TATAT V
Sbjct: 129 VAFLQTI-KISFYAVDEAHCISEWGHDFRPEYRNIRPIINRIGNAPVIALTATATDKVRS 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + D + F+RPNLY K +DI +++ F Q G S IIYC ++
Sbjct: 188 DIKKSLGIADAKEFRSSFNRPNLYYEVRPKTNDID---KQIIKFIRQNAGKSGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ ++L N I+ PYHA + R + F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEELAEILRANDIKAAPYHAGLESGVRSQTQDDFLMERLDVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C FY D K F +E Q+ +
Sbjct: 305 FVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAQKDLKKLEK-FMEGKPVAE-QDIGR 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPR 419
+++ Y E CRR+ LL++F + P D C CDNC H ++ Q+
Sbjct: 363 QLLQETAAYAESSVCRRRMLLHYFG--------EEYPYDNCHNCDNCLHPKV----QIEA 410
Query: 420 GGRMVV 425
G +++
Sbjct: 411 GNALLI 416
>gi|395645604|ref|ZP_10433464.1| ATP-dependent DNA helicase, RecQ family [Methanofollis liminatans
DSM 4140]
gi|395442344|gb|EJG07101.1| ATP-dependent DNA helicase, RecQ family [Methanofollis liminatans
DSM 4140]
Length = 506
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 173/343 (50%), Gaps = 26/343 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ +L + P + LIAIDEAHC+S WGH FRP YR LS L+ PDVPI+A+TATA P V
Sbjct: 123 LTYLVQFP-VRLIAIDEAHCISAWGHTFRPEYRQLSGLKRYFPDVPIVALTATAIPEVRA 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L DP FDRPNL A V ++ MA L N + G I+YC +K
Sbjct: 182 DIAQHLGLSDPGEFVGTFDRPNLRYAV-VPKEKPMALLLACINRHRKESG--IVYCSSKK 238
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L + G YHA + R+ + F+ ++ V AT AFGMGIDKPDVR
Sbjct: 239 TAEDLARDLRKYGYSAAAYHAGLPTAVRERVQDDFLSGRVQTVCATVAFGMGIDKPDVRY 298
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK+L +YYQE GRAGRDGL S C Y ++ + + + DS +
Sbjct: 299 VVHYDLPKNLESYYQETGRAGRDGLDSECLLLYSPGEYGAVRSMIERDTPDSRQARIAVR 358
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR-HNEMLE------ 413
+ + Y E CRRKYLLN+F + P+ C CD C E ++
Sbjct: 359 KLDEMIGYCETTVCRRKYLLNYFGEAHA--------PETCGMCDTCEGQGETIDGTAYAR 410
Query: 414 -----LEQVPRGGRMVVENSEVWMSTEARPGREAFEFLPHLKT 451
+EQV + + + + S AR + LP T
Sbjct: 411 AILGCVEQVQKNAGIDLVADVLQGSKNARARERHLDLLPAYGT 453
>gi|228470561|ref|ZP_04055418.1| ATP-dependent DNA helicase RecQ [Porphyromonas uenonis 60-3]
gi|228307688|gb|EEK16664.1| ATP-dependent DNA helicase RecQ [Porphyromonas uenonis 60-3]
Length = 734
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 158/291 (54%), Gaps = 19/291 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I F +I +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATATP V
Sbjct: 127 IEFFRKI-KISFFAIDEAHCISEWGHDFRPEYRKIRPVVDEIGRRPIIALTATATPKVEH 185
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D NI + F+RPNLY + K +D+ A R + + S IIYC ++
Sbjct: 186 DIRKNLGILDGNIFKSSFNRPNLYYSVEPKGEDVNA--RIIRFIRKRPNKSGIIYCMSRE 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ +L NGI+ PYHA + K+R F+ + +V+VAT AFGMGIDKPDVR
Sbjct: 244 KVMNLSKLLQMNGIKALPYHAGLDAKERSANQDAFLSEECRVIVATIAFGMGIDKPDVRY 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIHY PK L YYQE GRAGRDG C FY D K N M +P QE
Sbjct: 304 VIHYDMPKSLEGYYQETGRAGRDGGEGYCLAFYNEKDIQKLENFMQGKPIAE----QEIG 359
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHN 409
+ ++ + + CRR YLL +F + + C CDNC N
Sbjct: 360 RQLLAKTSTFALTPMCRRAYLLYYFG--------ERYDQENCGACDNCAKN 402
>gi|431796165|ref|YP_007223069.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786930|gb|AGA77059.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 708
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 162/297 (54%), Gaps = 24/297 (8%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL P+ + R+ L+AIDEAHCVSQWGHDFRP Y + LR LPDVP +A+TA
Sbjct: 116 RLFGGAFPLTETLKTSRLSLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPDVPFVALTA 175
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGS 233
TA DI L LR P + FDRPN+ K++ KL +F E + S
Sbjct: 176 TADKQTRADIADKLGLRKPKWFISSFDRPNITYRIVPKRNS----FEKLLDFLEYHQKNS 231
Query: 234 TIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGM 293
IIYC ++ E + L G+ PYHA + + R F+KD +K++VAT AFGM
Sbjct: 232 GIIYCLSRKNVEDMAGRLQAAGLSALPYHAGLDRQTRASHQEKFIKDKVKIMVATIAFGM 291
Query: 294 GIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLN 352
GIDK +VR V+H P+++ YYQE GRAGRDGL S FY AD T MI P+
Sbjct: 292 GIDKSNVRFVVHMNMPQNIEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMIDTPDNP 351
Query: 353 DSEIQEHSKTMMKRVEK---YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
D +S+ M+ ++EK + + TCRR+YLL +F E Q K C NC
Sbjct: 352 D-----YSEVMLAKLEKMKQFCQSNTCRRRYLLGYFD------EEEQ----KDCGNC 393
>gi|387791080|ref|YP_006256145.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379653913|gb|AFD06969.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 729
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
I FL I I +A+DEAHC+S+WGHDFRP YR + ++ L + +PI+A+TATATP V
Sbjct: 129 IDFLRDID-ISFVAVDEAHCISEWGHDFRPEYRKIRQIIGQLGENIPIIALTATATPKVQ 187
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L +++ + + F+RPNL+ K++++ ++ + ++Q + IIYC ++
Sbjct: 188 QDIQKNLQMQNSQVFKSSFNRPNLFYEIRPKKNELKEIIKYI---KSQNGKAGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V + L+ NGI+ PYHA + R F+ + ++V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEEVAETLNVNGIKALPYHAGLDANTRATTQDKFLMEDVQVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIHY PK + YYQE GRAGRDG C FY D K + D + E
Sbjct: 305 FVIHYDMPKSMEGYYQETGRAGRDGGEGNCIAFYDQKDIDK----LAKFMKDKPVSEREI 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++K V Y E CRRK +L++F S + S + CDNCR
Sbjct: 361 GTQILKEVIDYAESSVCRRKQILHYFGESYNESSCSNM-----CDNCR 403
>gi|251798446|ref|YP_003013177.1| ATP-dependent DNA helicase RecQ [Paenibacillus sp. JDR-2]
gi|247546072|gb|ACT03091.1| ATP-dependent DNA helicase RecQ [Paenibacillus sp. JDR-2]
Length = 721
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 160/294 (54%), Gaps = 22/294 (7%)
Query: 120 DVPILF-LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV-TATAT 177
D P+ LS I +IAIDEAHCVSQWGHDFRPSYR L+ +P+ P++A TATAT
Sbjct: 119 DAPMFTTLSEQLHIPMIAIDEAHCVSQWGHDFRPSYRQLAGWIGKMPNRPLVAAFTATAT 178
Query: 178 PVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-----EG 232
V DI L LR+PN+ TGF RPNL L+ D NF QF +
Sbjct: 179 QEVAADITAMLGLREPNVFVTGFARPNLSLSVVSGGDK--------KNFLQQFLREREDQ 230
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
S IIY T+ E+V ++L R GI YH +S K+R E F D ++++VAT AFG
Sbjct: 231 SGIIYTATRKEAEQVQELLVRKGIAAGKYHGGLSDKERAETQERFRFDELRIMVATNAFG 290
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP+VR VIH+ P D+ +YYQE GRAGRDG S C ++ D + + +
Sbjct: 291 MGIDKPNVRYVIHWQMPGDIESYYQEAGRAGRDGEESECVLLFEPQDVQVQRFLIEQGMG 350
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
D + + + + Y + C ++Y++++F E V P C NC
Sbjct: 351 DEYRKSVQLSKLHNMMNYSRTQRCLQQYIVDYF-------GEKGVEPCGKCSNC 397
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 161/285 (56%), Gaps = 20/285 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHCVS+WGHDFRP YR L++LR P VP L +TATAT V DI L LR
Sbjct: 142 IAGFAIDEAHCVSEWGHDFRPDYRKLAQLRHYFPKVPWLGLTATATDRVRSDIINQLELR 201
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+P++ F+RPNLY K A ++L Q EGS IIYC ++ +++ L
Sbjct: 202 EPHVHIASFNRPNLYYEVRRK---TTAPYKELLAQVKQSEGSGIIYCLSRKKVDELTTKL 258
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
++GI+ PYHA + + R + F++D +KV+VAT AFGMGI+KPDVR VIHY P++
Sbjct: 259 KQDGIKVVPYHAGLDGETRTKNQNSFIRDDVKVIVATVAFGMGINKPDVRFVIHYDLPRN 318
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQP-----NLNDSEIQEHSKTMMK 365
+ YYQE GRAGRDG + C ++ D T +I Q + + Q + ++
Sbjct: 319 IEGYYQESGRAGRDGEPAHCTLYFGMGDIKTIEYLIAQKVDPETGMALEDEQRIATQQLR 378
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
RV Y E CRR L +F G S P C CDNC++
Sbjct: 379 RVINYAEATECRRIIQLGYF-GESF--------PGNCDNCDNCKY 414
>gi|398338006|ref|ZP_10522711.1| DNA helicase [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
Length = 626
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 192/377 (50%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ ++Y P + +++ L P I L+ I +C S D R LS
Sbjct: 52 KSLIYQLPAAIDSSSLTLVISPLIALMKDQVDSLKAKGISAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLGRIAVDEAHCVSQWGHDFRPEYRKLYE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIM- 217
LR P VPI+A+TATAT VI DI SL L++P ++ F R NL + Q++
Sbjct: 168 LRDKFPKFVPIIALTATATSRVIQDISDSLGLKEPALVKGSFFRENLNFSIRFPQNETSR 227
Query: 218 -ADLRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
++L KL NF+ G IIYC T+ E V + L +NG + YHA + R++
Sbjct: 228 ESELLKLLIQGNFQKTASGRAIIYCATRQKVESVYEFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D PDVR V+HY +P L +YYQE GRAGRDG SS C
Sbjct: 288 QDGYSAGKTNVLVATNAFGMGLDSPDVRLVVHYQSPASLESYYQEAGRAGRDGKSSSCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY +D + I N ++ +T++ V++Y CR++ L ++F G ++
Sbjct: 348 FYHPSDLVTQSFIIGKESN----RKGGETLLSFVKEYAVSNRCRQQILCSYF-GEEISTC 402
Query: 394 ESQVPPDKCCDNCRHNE 410
S CD C E
Sbjct: 403 RS-------CDICLEKE 412
>gi|149276388|ref|ZP_01882532.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
gi|149232908|gb|EDM38283.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
Length = 729
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 168/293 (57%), Gaps = 16/293 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVI 181
I FL I +I +A+DEAHC+S+WGHDFRP YR + ++ L +PI+A+TATATP V
Sbjct: 129 IEFLKLI-KISFVAVDEAHCISEWGHDFRPEYRKIRQVISGLGVGIPIIALTATATPKVQ 187
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L + D + + F+RPNL+ K+D I +R + + S IIYC ++
Sbjct: 188 QDIIKNLQMSDATLFKSSFNRPNLFYEIRPKRDVIKEIIRYIKYNTGK---SGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V + L+ NGI+ PYHA + K R + F+ + ++V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEEVAESLNLNGIKALPYHAGLEPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIH+ PK + YYQE GRAGRDG VC FY D K + D + E
Sbjct: 305 FVIHHDIPKSMEGYYQETGRAGRDGGEGVCIAFYAQKDVDK----LAKFMKDKPVSEREI 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEML 412
++K V Y E CRRK +L++F G + ++ + CDNC+ + L
Sbjct: 361 GTQILKEVIDYAESGVCRRKQILHYF-GENF----NETGCNCMCDNCKKPKQL 408
>gi|334706300|ref|ZP_08522166.1| ATP-dependent DNA helicase RecQ [Aeromonas caviae Ae398]
Length = 611
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELNDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+ R++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|325284946|ref|YP_004260736.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
gi|324320400|gb|ADY27865.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
Length = 733
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 151/262 (57%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR L + L D +P++ +TATATP V +DI
Sbjct: 134 RSVKISFVAVDEAHCISEWGHDFRPEYRNLKTIVGKLGDNIPMIGLTATATPKVQEDIVK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + D + F+RPNL+ K +I AD+ + F Q G S I+YC ++ E
Sbjct: 194 NLGIADAKLFKASFNRPNLFYEVRPKTQNIEADIIR---FVKQNVGKSGIVYCLSRKKVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ VL NGI PYHA K R +F+ + + VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQVLQVNGISAVPYHAGFDAKTRSRYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK L +YYQE GRAGRDG C FY D K M +P QE +
Sbjct: 311 HDIPKSLESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAE----QEIGNAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ V + E RRK++L++F
Sbjct: 367 LQEVVAFAETSMSRRKFILHYF 388
>gi|344201636|ref|YP_004786779.1| RecQ familyATP-dependent DNA helicase [Muricauda ruestringensis DSM
13258]
gi|343953558|gb|AEM69357.1| ATP-dependent DNA helicase, RecQ family [Muricauda ruestringensis
DSM 13258]
Length = 733
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 155/265 (58%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDD 183
FL + ++ +A+DEAHC+S+WGHDFRP YR L + L D +PI+ +TATATP V +D
Sbjct: 132 FLKNV-KLSFVAVDEAHCISEWGHDFRPEYRNLRGIINRLGDNIPIIGLTATATPKVQED 190
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKV 242
I +L + D + F+RPNL+ K D+ AD+ + F Q +G S IIYC ++
Sbjct: 191 IIKNLGMTDAKVFKASFNRPNLFYEVRPKTKDVDADIIR---FVKQNQGKSGIIYCLSRK 247
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ VL NG+ PYHA K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 248 RVEELAQVLQVNGVSAVPYHAGFDAKTRSKYQDMFLMEEVDVVVATIAFGMGIDKPDVRF 307
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C +Y D K M +P QE
Sbjct: 308 VIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYAYKDVEKLEKFMSGKPVAE----QEIG 363
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y E RRK++L++F
Sbjct: 364 NALLQEIVAYAETSMSRRKFILHYF 388
>gi|333029863|ref|ZP_08457924.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332740460|gb|EGJ70942.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 605
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 165/301 (54%), Gaps = 29/301 (9%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
+ LSE+ L D+ I L A+DEAHC+SQWGHDFRP Y L L P VP
Sbjct: 118 KLLSEIDYLLKDIDI---------SLFAVDEAHCISQWGHDFRPEYTQLGILHQYFPSVP 168
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASV--KQDDIMADLRKLTNF 226
++A+TATA + DI L L++P I + FDRPNL L V +Q D + + NF
Sbjct: 169 MVALTATADKITRQDIIRQLKLKNPKIFISSFDRPNLSLKVEVGYQQKD---KHKYIYNF 225
Query: 227 ENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVV 285
G + IIYC ++ E +C L + GI YHA ++ R++ F+ D ++VV
Sbjct: 226 IQDRPGEAGIIYCMSRKKTETICRYLEKKGISATIYHAGLAPNIREKAQDDFINDRVQVV 285
Query: 286 VATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNM 345
AT AFGMGIDK +VR VIHY PK + +YYQEIGRAGRDG++S FY D +
Sbjct: 286 CATIAFGMGIDKSNVRWVIHYNMPKSIESYYQEIGRAGRDGVASDTVLFYNVGDI----I 341
Query: 346 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDN 405
+ N+S+ QE + + R+++Y E CRR+ LL++F S + C N
Sbjct: 342 LLTKFANESKQQEINLEKLDRIQQYAESSICRRRILLSYFGEEST----------QNCGN 391
Query: 406 C 406
C
Sbjct: 392 C 392
>gi|428771662|ref|YP_007163452.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
gi|428685941|gb|AFZ55408.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
Length = 707
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 159/285 (55%), Gaps = 14/285 (4%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL+ + + I AIDEAHC+S+WGHDFR YR L +LR P +PI A+TATATP V
Sbjct: 125 FLNTVAKTNAIASFAIDEAHCISEWGHDFRLEYRQLRQLRQRFPQIPITALTATATPRVQ 184
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI L LR+P I F+RPNLY ++ + ++ N EGS IIYC +
Sbjct: 185 QDIIQQLRLRNPIIRRFSFNRPNLYYEVRPREK---RNYHQILQLINSLEGSGIIYCLAR 241
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + L ++ I PYH ++ + R F++D +++VAT AFGMGI+KPDVR
Sbjct: 242 KTTEDLAYRLRQDNISALPYHGGLTDEMRSHHQDCFIRDDARIMVATVAFGMGINKPDVR 301
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH+ P+++ +YYQE GRAGRDG + C Y +D K N + N +E Q+ ++
Sbjct: 302 FVIHHDLPRNIESYYQESGRAGRDGEPAKCILLYNPSDEYKINYFIKQKENINE-QKQAR 360
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+K+V++Y E CRR L +F E CDNC
Sbjct: 361 EQLKKVQEYAETNYCRRIVQLGYF-------GEKYKGDCGGCDNC 398
>gi|291514588|emb|CBK63798.1| ATP-dependent DNA helicase RecQ [Alistipes shahii WAL 8301]
Length = 730
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 163/293 (55%), Gaps = 26/293 (8%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +I ++ AIDEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 131 VAFLRKI-KVSFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGSAPLIALTATATPKVQL 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEG-STIIYC 238
DI +L + D ++ + F+RPNLY K + DI+ F Q EG S IIYC
Sbjct: 190 DIQKNLGMSDASVFKSSFNRPNLYYEIRPKHNVDHDII-------RFIKQNEGKSGIIYC 242
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E++ ++L NGI+ YHA + R F+ + ++V+VAT AFGMGIDKP
Sbjct: 243 LSRKKVEELTELLVANGIRALAYHAGMDASTRAANQDDFLMERVEVIVATIAFGMGIDKP 302
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQ 357
DVR VIHY PK L YYQE GRAGRDG C TFY D K Q + + EI
Sbjct: 303 DVRYVIHYDIPKSLEGYYQETGRAGRDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEI- 361
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
K ++ Y E CRRK LL++F G T D C CDNCR+
Sbjct: 362 --GKLLLLETVSYAESSMCRRKTLLHYF-GEDYT-------EDNCGNCDNCRN 404
>gi|411011638|ref|ZP_11387967.1| ATP-dependent DNA helicase RecQ [Aeromonas aquariorum AAK1]
Length = 611
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELNDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+ R++ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 156/282 (55%), Gaps = 8/282 (2%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R ++ IDEAHCVSQWGHDFRP Y+ L ELR P+VP++A+TATAT VI D+ ++
Sbjct: 996 RNKKLARFVIDEAHCVSQWGHDFRPDYKALGELRRMFPNVPVMALTATATKNVIVDVKSN 1055
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + + + F+RPNLY K +++ + +L E + + IIY + E +
Sbjct: 1056 LGIDGCEVFSQSFNRPNLYYDVRPKGKNLLQSIAELIQ-ERHADQTGIIYTLARKSSENI 1114
Query: 248 CDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
L + GI YHA + ++ +I + + IKVVVAT AFGMGIDKPDVR VIH
Sbjct: 1115 AKKLVQTYGISAEAYHAGMETDKKTDIQRKWQRGTIKVVVATIAFGMGIDKPDVRFVIHQ 1174
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK L YYQE GRAGRDG S CY ++ D + + + + +E M+ R
Sbjct: 1175 SLPKSLEGYYQETGRAGRDGEKSDCYLYFGYGDISTLRKMIKEGEGSDQQKERQAEMLNR 1234
Query: 367 VEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
V +Y E R CRR +L +F G E D CDNCR
Sbjct: 1235 VIEYCENKRDCRRVEILRYF-GERFDKNEC----DASCDNCR 1271
>gi|315127615|ref|YP_004069618.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
gi|315016129|gb|ADT69467.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
Length = 607
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L +NQ S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|428781470|ref|YP_007173256.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
gi|428695749|gb|AFZ51899.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
Length = 713
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 153/280 (54%), Gaps = 21/280 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L A+DEAHC+S+WGHDFRP YR L LR P+VP +A+TATAT V DI L L+
Sbjct: 137 LSLFAVDEAHCISEWGHDFRPEYRQLETLRQQFPEVPTIALTATATEQVRGDIIRQLKLK 196
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P I T FDRPNLY KQ L K +N GS I+YC ++ E+V L
Sbjct: 197 PPKIQITSFDRPNLYYEVQPKQRQHYNQLFKFIRHQN---GSGIVYCLSRRRVEEVAFRL 253
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
++GI PYHA ++ R++ F++D ++V+VAT AFGMGIDKPD+R V HY P++
Sbjct: 254 EKDGISALPYHAGMTDGNRRDYQTRFLRDDVQVMVATIAFGMGIDKPDIRFVAHYDLPRN 313
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
L YYQE GRAGRD + C + D T +I Q S Q ++ ++++ Y
Sbjct: 314 LENYYQEAGRAGRDNEPAQCLLLFGAKDIHTIEYLISQKEEEKS--QRLARQQLRKMIDY 371
Query: 371 LELRTCRR----KYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E CRR Y HF G+ CDNC
Sbjct: 372 AEGTDCRRTIQLSYFGEHFAGNCGN-----------CDNC 400
>gi|359437026|ref|ZP_09227101.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
gi|358028285|dbj|GAA63350.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
Length = 607
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L +NQ S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|282860206|ref|ZP_06269280.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|424899672|ref|ZP_18323214.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
gi|282587027|gb|EFB92258.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|388591872|gb|EIM32111.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
Length = 727
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 161/295 (54%), Gaps = 19/295 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL + ++ AIDEAHC+S+WGHDFRP YR + + PI+A+TATAT V
Sbjct: 129 IEFLKTV-KVSFYAIDEAHCISEWGHDFRPEYRKIRNAIEVIGRAPIIALTATATAKVRT 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + + F+RPNLY K+ + + +++ F Q G S IIYC ++
Sbjct: 188 DIVRSLGIEGCAEFRSSFNRPNLYYEVRPKKSEDDTN-KQIIRFIKQHTGKSGIIYCLSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ VL N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 247 KKVEELAAVLLANDIKAAPYHAGLDSEVRSKTQDQFLMEDIDVIVATIAFGMGIDKPDVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIHY PK L YYQE GRAGRDG +C FY D K + + I E
Sbjct: 307 FVIHYDIPKSLEGYYQETGRAGRDGEEGICLVFYSRNDLKK----LEKFMEGKPIAEQDI 362
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEML 412
+ +++ E Y E CRRK LL++F + P + C CDNCRH + L
Sbjct: 363 GRQLLQETEAYAESSVCRRKLLLHYFG--------EEYPKENCGMCDNCRHPKTL 409
>gi|298209031|ref|YP_003717210.1| ATP-dependent DNA helicase [Croceibacter atlanticus HTCC2559]
gi|83848958|gb|EAP86827.1| putative ATP-dependent DNA helicase [Croceibacter atlanticus
HTCC2559]
Length = 734
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 151/260 (58%), Gaps = 9/260 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSEL-RLPLPDVPILAVTATATPVVIDDICTSLML 190
I +AIDEAHC+S+WGHDFRP YR L ++ + D+PI+ +TATATP V +DI +L +
Sbjct: 138 ISFLAIDEAHCISEWGHDFRPEYRNLKKIIKRIGDDIPIIGLTATATPKVQEDILKNLNM 197
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+ N F+RPNLY K ++ +D+ + + + S IIYC ++ E++
Sbjct: 198 SNANTFKASFNRPNLYYEVRPKTKEVFSDIIRF--IKKRTGKSGIIYCLSRKSVEELAQT 255
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR VIH+ PK
Sbjct: 256 LQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPK 315
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRVE 368
L +YYQE GRAGRDG C FY D K M +P QE +++ V
Sbjct: 316 SLESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAE----QEIGHALLQEVV 371
Query: 369 KYLELRTCRRKYLLNHFKGS 388
Y E RRK+LL++F S
Sbjct: 372 AYAETSMSRRKFLLHYFGES 391
>gi|359446850|ref|ZP_09236489.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
gi|358039322|dbj|GAA72738.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
Length = 607
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFTHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L +NQ S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|281421757|ref|ZP_06252756.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281404252|gb|EFB34932.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 726
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 159/287 (55%), Gaps = 17/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + + P++A+TATAT V DI
Sbjct: 131 FLKTV-KISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGVAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D + F+RPNLY K DI R++ F Q +G S IIYC ++
Sbjct: 190 KKNLGIMDAKEFKSSFNRPNLYYEVRPKNKDID---RQIIMFIRQHKGKSGIIYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELAEVLKANEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K F N +E Q+ + +
Sbjct: 307 IHYDIPKSLEGYYQETGRAGRDGGEGICIAFYARKDLRKLEK-FMENKPVAE-QDIGRQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ Y E CRRK LL++F + + C CDNC H
Sbjct: 365 LQETAAYAESSVCRRKMLLHYFG--------EEYHEENCHNCDNCLH 403
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 156/282 (55%), Gaps = 8/282 (2%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R ++ IDEAHCVSQWGHDFRP Y+ L ELR P+VP++A+TATAT VI D+ ++
Sbjct: 996 RNKKLARFVIDEAHCVSQWGHDFRPDYKALGELRRMFPNVPVMALTATATKNVIVDVKSN 1055
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + + + F+RPNLY K +++ + +L E + + IIY + E +
Sbjct: 1056 LGIDGCEVFSQSFNRPNLYYDVRPKGKNLLQSIAELIQ-ERHADQTGIIYTLARKSSENI 1114
Query: 248 CDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
L + GI YHA + ++ +I + + IKVVVAT AFGMGIDKPDVR VIH
Sbjct: 1115 AKKLVQTYGISAEAYHAGMETDKKTDIQRKWQRGTIKVVVATIAFGMGIDKPDVRFVIHQ 1174
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK L YYQE GRAGRDG S CY ++ D + + + + +E M+ R
Sbjct: 1175 SLPKSLEGYYQETGRAGRDGEKSDCYLYFGYGDISTLRKMIKEGEGSDQQKERQAEMLNR 1234
Query: 367 VEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
V +Y E R CRR +L +F G E D CDNCR
Sbjct: 1235 VIEYCENKRDCRRVEILRYF-GERFDKNEC----DASCDNCR 1271
>gi|449681877|ref|XP_002160535.2| PREDICTED: putative ATP-dependent RNA helicase R290-like [Hydra
magnipapillata]
Length = 636
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 169/294 (57%), Gaps = 16/294 (5%)
Query: 116 LPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTAT 175
L L I + I +IAIDEAHC+S +G DFRP YR + R L DVP+LAVTAT
Sbjct: 240 LALSSALIDRIYEFQGICMIAIDEAHCLSSYGFDFRPKYREIVNTRKFLKDVPVLAVTAT 299
Query: 176 ATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTI 235
AT VI DI T + +++ +I T FDRPNL + + + + ++ K+ + N G I
Sbjct: 300 ATNKVIADIQTVMEMKNNILIKTSFDRPNLTINVKMYSQNTLDNIIKILHDAN---GPAI 356
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGI 295
IYC TK E + + L G+ + YH+ ++ R +I F+ + AT AFGMGI
Sbjct: 357 IYCLTKNDTEMMAEKLRDAGVDAKAYHSGLNKDDRFKIQEQFMNSEYSCITATIAFGMGI 416
Query: 296 DKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE 355
+KPD+R VIHYG P+++ +YYQEIGRAGRD S C+ FYK DF +I Q ++D +
Sbjct: 417 NKPDIRAVIHYGCPQNIESYYQEIGRAGRDCKESSCHMFYKQKDF----IIQQKFIDDIK 472
Query: 356 IQEHSK---TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ K +++ + Y+ CRRKY+LN+F ++ + + CDNC
Sbjct: 473 NPDYKKVRNNLLQVISSYVNTNECRRKYILNYFGQNTDNIMCGK------CDNC 520
>gi|322708811|gb|EFZ00388.1| QDE3 protein [Metarhizium anisopliae ARSEF 23]
Length = 1697
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 165/288 (57%), Gaps = 9/288 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ + IDEAHCVSQWGHDFRP Y+ + ++R+ P VP +A+TATAT VI DI +L +
Sbjct: 964 KFARLVIDEAHCVSQWGHDFRPDYKTIGQVRMRFPRVPFMALTATATQNVIVDIKHNLNM 1023
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+ + + F+RPNLY K+ A + ++ +T I+Y ++ E+V
Sbjct: 1024 ANCQVFSQSFNRPNLYYEVRTKKSHANATESIASLINAKYHNTTGIVYTLSRKQAEEVAQ 1083
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ GI R YHA I + + ++ + K IKVVVAT AFGMGIDKPDVR V+H+G P
Sbjct: 1084 TLAGYGIAARHYHAAIDPQAKVDVQRSWQKGDIKVVVATIAFGMGIDKPDVRFVMHHGLP 1143
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
K L YYQE GRAGRDG S C FY AD MI + N+++ +E M+ RV
Sbjct: 1144 KSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKKMIADGDGNNAQ-KERQMVMLNRVT 1202
Query: 369 KYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+ + ++ CRR +L +F G ++ Q K CDNCR + E +
Sbjct: 1203 AFCDNKSDCRRTEVLRYF-GEDFVPSQCQ----KSCDNCRAGLVFEQQ 1245
>gi|343083870|ref|YP_004773165.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342352404|gb|AEL24934.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 709
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 148/256 (57%), Gaps = 8/256 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L+A+DEAHCVSQWGHDFRP Y L LR PD P LA+TATA DI L L
Sbjct: 132 LSLVAVDEAHCVSQWGHDFRPEYLKLGALRKAFPDTPFLALTATADKQTRKDISARLHLN 191
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDV 250
P + FDRPN+ +++ D KL +F +++ + I+YC ++ E
Sbjct: 192 KPEWFISSFDRPNITYRVTLRSDG----FGKLVDFLQHRPNDAGIVYCLSRKSVENTAAK 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L+ NG PYHA +S + R+E F+KD +K++VAT AFGMGIDK +VR V+H P+
Sbjct: 248 LNANGFSALPYHAGLSKENRQENQEKFIKDEVKIIVATIAFGMGIDKSNVRFVVHTNMPQ 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
++ +YYQE GRAGRDGL FY D T MI + ++ E H K M +
Sbjct: 308 NIESYYQETGRAGRDGLPGEALLFYSLGDSITLKRMI--ESADNEEYVRHMKAKMDTMVA 365
Query: 370 YLELRTCRRKYLLNHF 385
+ + ++CRRKYLL +F
Sbjct: 366 FCQTKSCRRKYLLGYF 381
>gi|431795569|ref|YP_007222473.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786334|gb|AGA76463.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 725
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 166/284 (58%), Gaps = 21/284 (7%)
Query: 130 PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSL 188
++ +AIDEAHC+S+WGHDFRP YR + + + D +PI+A+TATATP V DI +L
Sbjct: 130 AQLSFVAIDEAHCISEWGHDFRPEYRKIKSIIAQIGDALPIIALTATATPKVQQDIQRNL 189
Query: 189 MLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKVICEK 246
+ + ++ + F+R NL+ K +D +K + ++Q S IIYC ++ E+
Sbjct: 190 NMEEADLFKSSFNRTNLFYEVRPKAK---SDTKKHLIKYVKSQKGKSGIIYCLSRKKVEE 246
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ ++L NGI PYHA + R + F+ + + VVVAT AFGMGIDKPDVR VIHY
Sbjct: 247 IAELLKVNGINAAPYHAGLESAMRIKNQDDFLNEEVDVVVATIAFGMGIDKPDVRYVIHY 306
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSKTMMK 365
PK L YYQE GRAGRDGL C FYK D K + +N+ +E++K +++
Sbjct: 307 DVPKSLEGYYQETGRAGRDGLEGHCLMFYKYEDIVKLEKFNKDKPVNE---RENAKVLLQ 363
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+ Y E CRR+ LL++F G S+ + C CDNC+
Sbjct: 364 EMAAYAESSVCRRRVLLHYF-GESLN--------EDCGFCDNCK 398
>gi|406883341|gb|EKD30951.1| hypothetical protein ACD_77C00439G0002 [uncultured bacterium]
Length = 733
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 157/286 (54%), Gaps = 16/286 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V +
Sbjct: 131 IAFLKQLT-ISFYAVDEAHCISEWGHDFRPEYRRIYPIVQEIGKAPVIALTATATPKVQN 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D + T F+RPNLY K + R++ F EG S IIYC ++
Sbjct: 190 DIQKNLGMSDAMVFKTSFNRPNLYYEIRHKANT----EREIIRFIKANEGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E V +L NGI+ PYHA + R F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 246 KKVEDVAQLLVVNGIKALPYHAGLDAYTRASNQDSFLMEGVDVIVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHS 360
VIHY PK L +YYQE GR+GRDG C FY D K Q +++ EI
Sbjct: 306 FVIHYDIPKSLESYYQETGRSGRDGGEGQCIAFYSYKDIQKLEKFMQGKPISEQEI---G 362
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ ++ Y E CRRK LLN+F + + CCDNC
Sbjct: 363 RQLLMETVSYAESSICRRKVLLNYFG------EDYKQDNCGCCDNC 402
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 182/354 (51%), Gaps = 56/354 (15%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q++Y+TPE V+ N +F++++
Sbjct: 1005 QLLYVTPEMVSKNQTFVNKM---------------------------------------- 1024
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
+ L R ++ I IDEAHCVSQWGHDFRP Y+ + E R P VP++A+TATAT VI D
Sbjct: 1025 MDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILD 1084
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKV 242
+ +L + D + F+RPNLY +K+ +++A + +L + +++G T IIY ++
Sbjct: 1085 VKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAEL--IKEKYDGQTGIIYTLSRK 1142
Query: 243 ICEKVCDVLS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + L ++ I+ + YHA I+ ++ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1143 SAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGRVKVVVATIAFGMGIDKPDVR 1202
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH PK L YYQE GRAGRDG S CY ++ D + D +E
Sbjct: 1203 FVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQL 1262
Query: 362 TMMKRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEM 411
M+ RV Y E + TCRR+ +L +F G KC CDNCR+ +
Sbjct: 1263 QMLNRVVSYCESQHTCRREEVLRYF-GEEFDYR-------KCRDGCDNCRNGRI 1308
>gi|77361487|ref|YP_341062.1| ATP-dependent DNA helicase [Pseudoalteromonas haloplanktis TAC125]
gi|76876398|emb|CAI87620.1| ATP-dependent DNA helicase [Pseudoalteromonas haloplanktis TAC125]
Length = 607
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 164/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ +I L AIDEAHCVS WGHDFRP Y LSEL+ VP++A+TATA
Sbjct: 133 FLERLSHLKISLFAIDEAHCVSHWGHDFRPHYFRLSELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L ++Q S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + +YYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|383766435|ref|YP_005445416.1| ATP-dependent DNA helicase RecQ [Phycisphaera mikurensis NBRC
102666]
gi|381386703|dbj|BAM03519.1| ATP-dependent DNA helicase RecQ [Phycisphaera mikurensis NBRC
102666]
Length = 657
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 165/308 (53%), Gaps = 31/308 (10%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD----VPILAVTATATPVV 180
+LSR+ + AIDEAHC+S WGHDFRP YR L ELR D VP++A+TATATP V
Sbjct: 141 WLSRL-HVTRFAIDEAHCISAWGHDFRPEYRMLGELRTGFGDRFRGVPMMALTATATPRV 199
Query: 181 IDDICTSLMLRD---PN------IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFE 231
DD+ L L P + GF+RPNL+ K+ ++ + + ++ E
Sbjct: 200 ADDVVAQLGLGGDAKPGEAGAVAVHRGGFERPNLFYEVRPKRK-VVEQIAAMLEADDTAE 258
Query: 232 GSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAF 291
G I+YC ++ CE++ + L G+ PYHA + + R E F+ ++V AT AF
Sbjct: 259 G--IVYCGSRKKCEEIAEQLQAAGLPALPYHAGLDAETRAENQHGFIYGDCRLVAATIAF 316
Query: 292 GMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNL 351
GMG+DKPDVR V+H P++L YYQE GRAGRDGL C FY D + F
Sbjct: 317 GMGVDKPDVRFVVHADLPQNLEGYYQETGRAGRDGLPGKCVLFYSGGDRARVE-FFINKK 375
Query: 352 NDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAES-----------QVPPD 400
D + +EH++ ++++ KY CR ++L HF VA + + PP
Sbjct: 376 EDPQEREHAQEQLEKMIKYCHTTGCRTAFVLRHFGDELARVAPATGAHAGGEAGVERPPG 435
Query: 401 KC--CDNC 406
+C CDNC
Sbjct: 436 RCGHCDNC 443
>gi|390943602|ref|YP_006407363.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390417030|gb|AFL84608.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 725
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 161/280 (57%), Gaps = 15/280 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I +AIDEAHC+S+WGHDFRP YR + + + + +PI+A+TATATP V DI +L +
Sbjct: 132 ISFVAIDEAHCISEWGHDFRPEYRRIKSIIAQIGEKLPIIALTATATPKVQQDIQRNLQM 191
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKVICEKVC 248
+ ++ + F+R NLY K I + +K + + Q S IIYC ++ E++
Sbjct: 192 EEADLFKSSFNRTNLYYEVRPK---IKNETKKQIIKYIKGQKGKSGIIYCLSRKKVEEIA 248
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+L NGI PYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 249 SLLKVNGINAAPYHAGLDQNVRIKNQDDFLNEELDVIVATIAFGMGIDKPDVRYVIHYDV 308
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK L YYQE GRAGRDGL C FYK D K + F + +E +E++K +++ +
Sbjct: 309 PKSLEGYYQETGRAGRDGLEGHCLMFYKYDDIIKLDK-FNKDKPVTE-RENAKILLQEMA 366
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y E CRRK LL++F E CDNC+H
Sbjct: 367 AYAESSICRRKTLLHYF-------GEYMEKDCGFCDNCKH 399
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 182/354 (51%), Gaps = 56/354 (15%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q++Y+TPE V+ N +F++++
Sbjct: 1039 QLLYVTPEMVSKNQTFVNKM---------------------------------------- 1058
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
+ L R ++ I IDEAHCVSQWGHDFRP Y+ + E R P VP++A+TATAT VI D
Sbjct: 1059 MDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILD 1118
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKV 242
+ +L + D + F+RPNLY +K+ +++A + +L + +++G T IIY ++
Sbjct: 1119 VKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAEL--IKEKYDGQTGIIYTLSRK 1176
Query: 243 ICEKVCDVLS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + L ++ I+ + YHA I+ ++ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1177 SAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGQVKVVVATIAFGMGIDKPDVR 1236
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH PK L YYQE GRAGRDG S CY ++ D + D +E
Sbjct: 1237 FVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQL 1296
Query: 362 TMMKRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEM 411
M+ RV Y E + TCRR+ +L +F G KC CDNCR+ +
Sbjct: 1297 QMLNRVVSYCESQHTCRREEVLRYF-GEEFDYR-------KCRDGCDNCRNGRI 1342
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 182/354 (51%), Gaps = 56/354 (15%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q++Y+TPE V+ N +F++++
Sbjct: 1050 QLLYVTPEMVSKNQTFVNKM---------------------------------------- 1069
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
+ L R ++ I IDEAHCVSQWGHDFRP Y+ + E R P VP++A+TATAT VI D
Sbjct: 1070 MDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILD 1129
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKV 242
+ +L + D + F+RPNLY +K+ +++A + +L + +++G T IIY ++
Sbjct: 1130 VKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAEL--IKEKYDGQTGIIYTLSRK 1187
Query: 243 ICEKVCDVLS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + L ++ I+ + YHA I+ ++ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1188 SAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGQVKVVVATIAFGMGIDKPDVR 1247
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH PK L YYQE GRAGRDG S CY ++ D + D +E
Sbjct: 1248 FVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQL 1307
Query: 362 TMMKRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEM 411
M+ RV Y E + TCRR+ +L +F G KC CDNCR+ +
Sbjct: 1308 QMLNRVVSYCESQHTCRREEVLRYF-GEEFDYR-------KCRDGCDNCRNGRI 1353
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 182/354 (51%), Gaps = 56/354 (15%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI 123
Q++Y+TPE V+ N +F++++
Sbjct: 1005 QLLYVTPEMVSKNQTFVNKM---------------------------------------- 1024
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
+ L R ++ I IDEAHCVSQWGHDFRP Y+ + E R P VP++A+TATAT VI D
Sbjct: 1025 MDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILD 1084
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKV 242
+ +L + D + F+RPNLY +K+ +++A + +L + +++G T IIY ++
Sbjct: 1085 VKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAEL--IKEKYDGQTGIIYTLSRK 1142
Query: 243 ICEKVCDVLS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + L ++ I+ + YHA I+ ++ + + +KVVVAT AFGMGIDKPDVR
Sbjct: 1143 SAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGRVKVVVATIAFGMGIDKPDVR 1202
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH PK L YYQE GRAGRDG S CY ++ D + D +E
Sbjct: 1203 FVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQL 1262
Query: 362 TMMKRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEM 411
M+ RV Y E + TCRR+ +L +F G KC CDNCR+ +
Sbjct: 1263 QMLNRVVSYCESQHTCRREEVLRYF-GEEFDYR-------KCRDGCDNCRNGRI 1308
>gi|443476000|ref|ZP_21065927.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
gi|443019101|gb|ELS33248.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
Length = 769
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 160/285 (56%), Gaps = 22/285 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHCVS+WGHDFRP YR LS LR PDVP++ +TATAT V +DI L L+
Sbjct: 165 IAGFAIDEAHCVSEWGHDFRPEYRQLSRLRQFYPDVPVIGLTATATERVREDIIQQLDLQ 224
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P + F+R NLY KQ + + L + + +GS I+YC ++ ++ + L
Sbjct: 225 QPYVHVASFNRDNLYYEVVPKQGTEQSYVNLLQQIK-RMQGSGIVYCLSRKRVNEIAERL 283
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+GI PYHA +S K+R+E +++D ++V+VAT AFGMGI+KPDVR VIHY PK+
Sbjct: 284 REDGIAAIPYHAGLSAKEREENQTRWIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPKN 343
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQ---PNLND--SEIQEHSKTMMK 365
+ YYQE GRAGRDG S C F D T +I Q P+ N+ Q ++ ++
Sbjct: 344 IEGYYQESGRAGRDGEDSHCTLFLGYQDLETIKYLIAQKVDPHTNEPLEAEQRIAQQQLR 403
Query: 366 RVEKYLELRTCRR----KYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+V Y E CRR +Y HF G CDNC
Sbjct: 404 QVVDYAEGLACRRTILLRYFGEHFSGDCAN-----------CDNC 437
>gi|359449260|ref|ZP_09238757.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
gi|392537893|ref|ZP_10285030.1| ATP-dependent DNA helicase [Pseudoalteromonas marina mano4]
gi|358044909|dbj|GAA75006.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
Length = 607
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 165/286 (57%), Gaps = 17/286 (5%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ +I L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLKISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L +NQ S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + E +TCRR+ LLN+F S+ ++C CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF---------SEYQREQCGNCDIC 405
>gi|90407207|ref|ZP_01215394.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
gi|90311630|gb|EAS39728.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
Length = 602
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 158/267 (59%), Gaps = 14/267 (5%)
Query: 125 FLSRIPRIV--LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ + L AIDEAHC+SQWGHDFRP Y L +L++ P VP++A+TATA
Sbjct: 127 FMQRLKTLTINLFAIDEAHCISQWGHDFRPEYALLGQLKIHFPQVPLVALTATADHATQK 186
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCPT 240
DI L DP + FDRPN+ K ++ +L N+ E+Q E S IIYC +
Sbjct: 187 DILARLQFNDPLLSIHSFDRPNIEYLLIEKYRPLI----QLFNYLAEHQHE-SGIIYCTS 241
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ L G+ R YHA + L +R+ + F+KD + +VVAT AFGMGIDKP+V
Sbjct: 242 RRRTEEIAQKLQGKGLNARCYHAGLELSERQLVQDKFIKDEVDIVVATVAFGMGIDKPNV 301
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--IQE 358
R V+HY PK++ +YYQE GRAGRDGL + FY AD + + + N N+ + I+
Sbjct: 302 RFVVHYEIPKNIESYYQETGRAGRDGLPAQAMLFYDPADPARVRAMLEKNENEEQRRIEL 361
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHF 385
H M + E +TCRR+ LLN+F
Sbjct: 362 HKLNTMV---AFAEAQTCRRQVLLNYF 385
>gi|85817623|gb|EAQ38797.1| ATP-dependent DNA helicase RecQ [Dokdonia donghaensis MED134]
Length = 731
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 152/262 (58%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +AIDEAHC+S+WGHDFRP YR L ++ + D +PI+AVTATATP V +DI
Sbjct: 134 REQKISFLAIDEAHCISEWGHDFRPEYRNLRKIIGRIGDNIPIIAVTATATPKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + + N F+RPNLY K + AD+ F Q EG S IIYC + E
Sbjct: 194 NLGITNANTFKASFNRPNLYYEVRPKTAQVDADI---IRFVKQNEGKSGIIYCLARKRVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L NG++ PYHA + K R +F+ + + VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQTLQVNGLKAVPYHAGLDAKTRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK + +YYQE GRAGRDG C FY D K M +P QE +
Sbjct: 311 HDIPKSIESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAE----QEIGHAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ V + E RRK++L++F
Sbjct: 367 LQEVVAFAETSISRRKFILHYF 388
>gi|393784306|ref|ZP_10372471.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392666082|gb|EIY59599.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 601
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 162/287 (56%), Gaps = 20/287 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I +L R + L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +
Sbjct: 118 IDYLLRDMHLSLFAIDEAHCISQWGHDFRPEYAQMGILHQVFPHIPIIALTATADKITRE 177
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGS-TIIYCP 239
DI L L DP + + FDRPNL LA +Q + R + F ++ G IIYC
Sbjct: 178 DIIRQLHLTDPKVFISSFDRPNLSLAVKRGYQQKE---KSRTILEFIDRHAGECGIIYCM 234
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E V +L ++GI+ YHA +S +QR F+ D I+VV AT AFGMGIDK +
Sbjct: 235 SRSKTETVAQMLQKHGIRCGVYHAGLSTQQRDATQDDFINDRIQVVCATIAFGMGIDKSN 294
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK + ++YQEIGRAGRDG+ S FY D ++ +S Q
Sbjct: 295 VRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLGDL----ILLTKFATESNQQSI 350
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ ++R+++Y E CRR+ LL++F G V +K C NC
Sbjct: 351 NLEKLQRMQQYAEANICRRRILLSYF-GEKV---------EKDCGNC 387
>gi|421497331|ref|ZP_15944503.1| ATP-dependent DNA helicase RecQ [Aeromonas media WS]
gi|407183677|gb|EKE57562.1| ATP-dependent DNA helicase RecQ [Aeromonas media WS]
Length = 607
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 159/284 (55%), Gaps = 16/284 (5%)
Query: 125 FLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA
Sbjct: 130 FLDRLAELPLGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
D+ L L DP I FDRPN+ + K LR + ++Q I+YC ++
Sbjct: 190 DMLHRLELHDPFIHTASFDRPNIRYSLVEKFKGAEQLLRYV---QSQKGNCGIVYCSSRN 246
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E+V + LSR+G + PYHA + L QR F+KD +++VVAT AFGMGIDKP+VR
Sbjct: 247 RVEEVAERLSRHGCKASPYHAGLPLDQRLRTQDAFLKDDVEIVVATVAFGMGIDKPNVRF 306
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK++ +YYQE GRAGRDG + Y AD + + N+ + + + +
Sbjct: 307 VVHYDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQY 365
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR+ LLN+F + DK C NC
Sbjct: 366 KLNVMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 399
>gi|255535742|ref|YP_003096113.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
gi|255341938|gb|ACU08051.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
Length = 732
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 153/263 (58%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I +AIDEAHC+S+WGHDFRP YR L + + DVP++A+TATATP V DDI
Sbjct: 132 FLKEV-KISFVAIDEAHCISEWGHDFRPEYRNLKLIIDKIADVPVIALTATATPKVQDDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + + + F+RPNLY K + D R++ F N +G S I+YC ++
Sbjct: 191 QKTLGMSNALVFKESFNRPNLYYEVRPK---VNID-REIVKFINARKGKSGIVYCLSRRK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ +L NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFAQLLQVNGINALPYHAGLDQKTRVMNQDKFLMEEADVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKT 362
IHY PK L +YYQE GRAGRDG C FY D K + Q +++ EI
Sbjct: 307 IHYDIPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI---GLQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++ V+ Y E RR+Y+L +F
Sbjct: 364 LLNEVQGYAETSMSRRQYILYYF 386
>gi|428210292|ref|YP_007094645.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
gi|428012213|gb|AFY90776.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
Length = 708
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 166/299 (55%), Gaps = 17/299 (5%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L+E LP D L +I I AIDEAHCVS+WGHDFRP YR L +LR P VP
Sbjct: 119 RLLNEKFLPFLD---LIREKIG-IAAFAIDEAHCVSEWGHDFRPEYRQLKQLRQRYPGVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
LA+TATAT V DI L L P+I F+RPNLY KQ + L ++
Sbjct: 175 TLALTATATDRVRQDIIQQLGLSQPSIHIASFNRPNLYYEVQPKQKQSYSQLLQIIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
Q EGS I+YC ++ +++ L ++ I PYHA +S +R E F++D ++V+VAT
Sbjct: 232 QSEGSGIVYCLSRRKVDEIAFKLQQDKIAALPYHAGLSDTERAENQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIF 347
AFGMGI+KPDVR VIH+ P+++ YYQE GRAGRDG ++ C F D T +I
Sbjct: 292 IAFGMGINKPDVRFVIHHDLPRNIEGYYQESGRAGRDGETARCTLFLGYGDIKTIEYLID 351
Query: 348 QPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Q D + Q ++ +++V + E CRR +L +F E CDNC
Sbjct: 352 QK--TDLQGQRIARQQLRQVIDFAEGTDCRRTIVLGYF-------GERFAGQCSGCDNC 401
>gi|261415059|ref|YP_003248742.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385790017|ref|YP_005821140.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371515|gb|ACX74260.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326372|gb|ADL25573.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 614
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 165/292 (56%), Gaps = 23/292 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I +L + I L AIDEAHC+SQWGHDFRP Y L L P I+A+TATA + +
Sbjct: 121 IPWLQQHLSISLFAIDEAHCISQWGHDFRPEYTQLGMLHQAFPSATIMALTATADKLTKE 180
Query: 183 DICTSLMLRDPNIINTGFDRPNLYL------AASVKQDDIMADLRKLTNFENQFEGSTII 236
DI L LRD + + FDRPNL L +AS K I++ + K ++ E S II
Sbjct: 181 DIVRQLNLRDFRLFVSSFDRPNLSLDVRRGYSASEKLKAILSIISK-----HKHE-SGII 234
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC ++ EKV + L G+ + YHA ++ ++R + F+ D I VV AT AFGMGID
Sbjct: 235 YCLSRKSTEKVAEELINAGVYAKAYHAGLTAEERNNVQEDFINDNINVVCATIAFGMGID 294
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
K +VR VIHY PK + ++YQEIGRAGRDGL S FY D + + +NDS
Sbjct: 295 KSNVRYVIHYNLPKSIESFYQEIGRAGRDGLPSETVLFYNFQDI----ITLRKFVNDSGQ 350
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++ + + R+++Y E + CRR+ LLN+F E+ CD C+H
Sbjct: 351 RDINSEKLDRMQEYAESQVCRRRILLNYF-------GENNSSNCGNCDICKH 395
>gi|428778146|ref|YP_007169933.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
gi|428692425|gb|AFZ45719.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
Length = 709
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 183/384 (47%), Gaps = 62/384 (16%)
Query: 28 ELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTNNTSFLSRIPRIV 87
++ T ++ + F SS+T E++ + +++Y+ PE + + S +
Sbjct: 72 QVETLQKNGIAATFLNSSLTAEEARSRRLSILNGEMKLLYLAPEKLVSPAS------KTF 125
Query: 88 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWG 147
L A+ E H +S L AIDEAHC+S+WG
Sbjct: 126 LQAVQEKHGLS-----------------------------------LFAIDEAHCISEWG 150
Query: 148 HDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYL 207
HDFRP YR L LR P +P++A+TATAT V DI L L P + T FDRPNLY
Sbjct: 151 HDFRPEYRQLKTLRSLFPKIPMIALTATATERVRSDIIHQLTLDQPKVQITSFDRPNLYY 210
Query: 208 AASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISL 267
KQ L K + GS I+YC ++ E+V L ++GI PYHA +S
Sbjct: 211 EVQPKQRQHYNQLFKFIRHQT---GSGIVYCLSRRRVEEVAFRLKKDGISALPYHAGMSD 267
Query: 268 KQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGL 327
R + F++D ++V+VAT AFGMGIDKPD+R V+HY P++L YYQE GRAGRD
Sbjct: 268 GNRSDYQTRFLRDDVQVMVATIAFGMGIDKPDIRFVVHYDLPRNLENYYQEAGRAGRDSE 327
Query: 328 SSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRR----KYLL 382
+ C + D T I Q D + Q ++ +++V Y E CRR Y
Sbjct: 328 PAQCLLLFGAKDIHTIEYFISQK--EDEKSQRLARQQLRKVIDYAEGTDCRRTIQLSYFG 385
Query: 383 NHFKGSSVTVAESQVPPDKCCDNC 406
HF G+ CDNC
Sbjct: 386 EHFAGNCGN-----------CDNC 398
>gi|427717685|ref|YP_007065679.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
gi|427350121|gb|AFY32845.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
Length = 720
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 166/302 (54%), Gaps = 19/302 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D+ ++ I AIDEAHCVS+WGHDFRP YR L LR PD+P
Sbjct: 119 RLLSERFLPFLDL----INHQIGISSFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPDIP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+A+TATAT V DI L L+ P+I F+R NLY K A+L +L
Sbjct: 175 TVALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEIRSKTKYAYAELLELIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+ EGS I+YC T+ +++ L + + PYHA +S ++R + F++D ++V+VAT
Sbjct: 232 ETEGSAIVYCLTRKKVDELTFKLQNDKVAALPYHAGLSDEERSKNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIH+ P++L +YYQE GRAGRDG S C F+ D
Sbjct: 292 IAFGMGINKPDVRLVIHFDIPRNLESYYQESGRAGRDGEPSRCTVFFSFGDIKTIEWSID 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
D + Q +K ++++ Y E CRR L +F + P C CDNC
Sbjct: 352 QK-TDPQEQLIAKQQLRQMIDYAEGTDCRRTIQLGYF---------GERFPGNCGNCDNC 401
Query: 407 RH 408
R+
Sbjct: 402 RY 403
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 170/304 (55%), Gaps = 22/304 (7%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R L+E RL +LS++ + IAIDEAHCVS+WGHDFRP YR LS+LR +VP
Sbjct: 126 RLLNEGRLAG------WLSQV-YVAAIAIDEAHCVSEWGHDFRPEYRQLSQLRQWFANVP 178
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
I+A+TATAT V DI L L+DP + + F+RPNLY K +L +L
Sbjct: 179 IMALTATATERVRYDIIEQLNLQDPVLHVSTFNRPNLYYEVRPKHKQSYRELLQL--IRQ 236
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
Q S IIYC ++ +++ L R+GI PYHA + + R E F++D ++V+VAT
Sbjct: 237 QAGASGIIYCLSRKRVDELTTKLQRDGISALPYHAGMDNQLRSENQSRFIRDNVQVMVAT 296
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIF 347
AFGMGI+KPDVR V+HY P+++ YYQE GRAGRDG + C F+ D T +I
Sbjct: 297 IAFGMGINKPDVRFVVHYDLPRNIEGYYQESGRAGRDGEPARCTLFFSMGDVKTVEFLIS 356
Query: 348 Q---PNLND--SEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC 402
Q PN + + Q + ++RV Y E CRR L +F E+
Sbjct: 357 QKVDPNTGEPLEDEQRIATQQLRRVINYAEATECRRIIQLGYF-------GETFSGNCGN 409
Query: 403 CDNC 406
CDNC
Sbjct: 410 CDNC 413
>gi|423305643|ref|ZP_17283642.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423309812|ref|ZP_17287802.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|392680875|gb|EIY74239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392683916|gb|EIY77249.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 603
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 156/263 (59%), Gaps = 8/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGILHQLFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IKQLHLNQPRIFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI++ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KAETVAQMLQKQGIKSAVYHAGLSPARRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY AD ++ DS Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL----ILLTKFATDSGQQSINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++R+++Y E CRR+ LL++F
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF 376
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 168/290 (57%), Gaps = 17/290 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R R+ IDEAHCVSQWGHDFRP Y+ L ++ P +P++A+TATAT V D+
Sbjct: 286 LDRRGRLCRFVIDEAHCVSQWGHDFRPDYKELGIIKRKFPRIPLIALTATATKKVELDVL 345
Query: 186 TSLMLRDPNIINTGFDRPNL--YLAASVKQDDIMADLRKLTNFENQF--EGSTIIYCPTK 241
SL + + F+RPNL Y+ + K+ L + +F + + IIYC +K
Sbjct: 346 NSLGIEGCKVFRQSFNRPNLKYYVMSKTKKS-----LTDIVSFVHTYYPNSPGIIYCTSK 400
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE++ + L+ + ++ YHA +S ++R ++ ++ IK++VAT AFGMGIDK DVR
Sbjct: 401 KDCEEMSEKLNEH-LKTTFYHAGLSKRERNKVQEMWNDGTIKIIVATIAFGMGIDKSDVR 459
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-S 360
VIHY PK L YYQE GRAGRDGL SVC +Y D + N N + Q++
Sbjct: 460 FVIHYSLPKSLEGYYQETGRAGRDGLESVCILYYNYGDTKTIEFLIANNHNATSDQKNRQ 519
Query: 361 KTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
+ +K V +Y E +T CRRK +L+HF G + AE +K CDNC N
Sbjct: 520 REELKYVVQYCENKTDCRRKLVLSHF-GENFDPAEC----NKTCDNCTRN 564
>gi|374375555|ref|ZP_09633213.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
gi|373232395|gb|EHP52190.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
Length = 751
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 168/292 (57%), Gaps = 20/292 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
+ F S + +I A+DEAHC+S+WGHDFRP YR L E+ + P+ ++A+TATATP V
Sbjct: 148 LTFFSDL-KISFFAVDEAHCISEWGHDFRPEYRRLREMMNQINPEAAVIALTATATPKVQ 206
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYL----AASVKQDDIMADLRKLTNFENQFEGSTIIY 237
DI +L L+D NI + F+R NLY S KQ + + +R + +N+ S IIY
Sbjct: 207 SDIVKNLALKDANIFISSFNRDNLYYEIVPKVSKKQTN-ESMVRFIKGMKNK---SGIIY 262
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
+ E++ D+L NGI+ YHA + K R E F+ + ++V+VAT AFGMGIDK
Sbjct: 263 TLNRKTTEELADILMANGIKAVAYHAGLDSKLRAERQDQFLNEDVQVIVATIAFGMGIDK 322
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEI 356
PD+R VIHY K + YYQE GRAGRDGL C +Y D +K +++ L++ E+
Sbjct: 323 PDIRFVIHYNISKSIENYYQETGRAGRDGLEGKCLLYYSHKDVSKLEHLMRDKPLSEREV 382
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++ + E CRRK +L++F G TV + CDNCRH
Sbjct: 383 ---GAQLINETVAFAESGVCRRKVILSYF-GEQYTVENCGL-----CDNCRH 425
>gi|198276249|ref|ZP_03208780.1| hypothetical protein BACPLE_02441 [Bacteroides plebeius DSM 17135]
gi|198270691|gb|EDY94961.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 611
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 166/301 (55%), Gaps = 29/301 (9%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R +SE+ L D+ I L AIDEAHC+S WGHDFRP Y L +R P+VP
Sbjct: 117 RLMSEMNYLLRDI---------NISLFAIDEAHCISHWGHDFRPEYTQLKAIRQYFPNVP 167
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAAS---VKQDDIMADLRKLTN 225
++A+TATA + +DI L +R+P I + FDRPNL L +++ I A ++ L
Sbjct: 168 VVALTATADKITREDIIRQLEMRNPEIFISSFDRPNLSLEVKRGYQQKEKIKAIVKFLRR 227
Query: 226 FENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVV 285
N+ S IIYC ++ EKV +L + G YHA +S +QR+ F+ D ++++
Sbjct: 228 HRNE---SGIIYCMSRNGTEKVAQLLEKEGFDVAAYHAGMSNEQREITQDDFINDRVQII 284
Query: 286 VATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNM 345
AT AFGMGIDK +VR VIHY PK + +YQEIGRAGRDGL S FY D +
Sbjct: 285 CATIAFGMGIDKSNVRWVIHYNLPKSIENFYQEIGRAGRDGLPSETLLFYSFGDI----I 340
Query: 346 IFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDN 405
+ +S Q + + R+++Y E CRR+ LLN+F G ++ D C N
Sbjct: 341 LLSRFAAESNQQGINLEKLNRMQQYAESDICRRRILLNYF-GETM---------DHDCGN 390
Query: 406 C 406
C
Sbjct: 391 C 391
>gi|336265633|ref|XP_003347587.1| SGS1 protein [Sordaria macrospora k-hell]
gi|380096454|emb|CCC06502.1| putative SGS1 protein [Sordaria macrospora k-hell]
Length = 2276
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 165/284 (58%), Gaps = 10/284 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I IDEAHCVSQWGHDFRP Y+ + E R P VP++A+TATAT VI D+ +L +
Sbjct: 1343 KLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFPGVPVMALTATATHNVILDVKHNLAM 1402
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+ F+RPNLY +K+ +++A + +L + +++G T IIY ++ E +
Sbjct: 1403 DTCETFSQSFNRPNLYYEVRLKEQNLVARIAEL--IQEKYDGQTGIIYTLSRKSAENIAK 1460
Query: 250 VLS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L ++GI+ + YHA I+ +++ ++ + +KVVVAT AFGMGIDKPDVR VIH
Sbjct: 1461 NLEEKHGIRAKHYHASITTEEKIKVQHDWQAGDVKVVVATIAFGMGIDKPDVRFVIHQHI 1520
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK L YYQE GRAGRDG S CY ++ D + D E +E K M+ V
Sbjct: 1521 PKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRRMIAEGDGDYEQKERQKHMLNMVV 1580
Query: 369 KYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEM 411
Y E + TCRR+ +L +F G + + CDNCR+ +
Sbjct: 1581 NYCESQHTCRREEVLRYF-GEEFDFRKCK----DGCDNCRYGRI 1619
>gi|119470517|ref|ZP_01613220.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
gi|119446218|gb|EAW27495.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
Length = 607
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 165/286 (57%), Gaps = 17/286 (5%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ +I L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLKISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L +NQ S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + E +TCRR+ LLN+F S+ ++C CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF---------SEYQREQCGNCDIC 405
>gi|75908908|ref|YP_323204.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
gi|75702633|gb|ABA22309.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
Length = 718
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 166/300 (55%), Gaps = 15/300 (5%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D+ ++ I + AIDEAHCVS+WGHDFRP YR L LR P+VP
Sbjct: 119 RLLSERFLPFLDL----VNEKVGISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+LA+TATAT V DI L L+ P+I F+R NLY K A+L +L +N
Sbjct: 175 VLALTATATDRVRSDIIQQLGLKQPSIHLASFNRQNLYYEVRPKSKQAYAELLELIR-DN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ E++ L ++ I YHA + +R + F++D ++V+VAT
Sbjct: 234 --EGSAIIYCLTRKKVEELTFKLQKDKISALSYHAGLPDDERSKNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+H+ P++L +YYQE GRAGRDG S C F+ D +
Sbjct: 292 IAFGMGINKPDVRLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFGDIKTIEWSIE 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
D + Q +K ++++ Y E CRR L +F E CDNCR+
Sbjct: 352 QK-TDPQEQLIAKQQLRQMIDYAEGTDCRRTIQLGYF-------GERFAGNCGNCDNCRY 403
>gi|305664748|ref|YP_003861035.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
gi|88707870|gb|EAR00109.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
Length = 736
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 173/320 (54%), Gaps = 13/320 (4%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATP 178
+V I FL + I +A+DEAHC+S+WGHDFRP YR L + L D +PI+ +TATATP
Sbjct: 132 EVYIEFL-KSAGISFVAVDEAHCISEWGHDFRPEYRNLRTIVARLGDSIPIIGLTATATP 190
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIY 237
V +DI +L + D + F+R NL+ K ++ +D+ + F Q G S I+Y
Sbjct: 191 KVQEDIIKNLGITDAKVFKASFNRANLFYEVRTKTANVDSDIIR---FVKQNSGKSGIVY 247
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C ++ E++ VL NG+ PYHA K R + +F+ + + VVVAT AFGMGIDK
Sbjct: 248 CLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTRSKYQDMFLMEDVDVVVATIAFGMGIDK 307
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSE 355
PDVR VIH+ PK + +YYQE GRAGRDG C FY D K M +P
Sbjct: 308 PDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAE--- 364
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
QE +++ V Y E RRK++L++F V D N + + + +
Sbjct: 365 -QEIGNALLQEVVAYAETSMSRRKFMLHYFGEEFDEVNGDGAAMDDNTRNPKEKQEAK-D 422
Query: 416 QVPRGGRMVVENSEVWMSTE 435
+V + R V E SE + S E
Sbjct: 423 EVLKLLRTVEETSEKFKSKE 442
>gi|404485707|ref|ZP_11020904.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
gi|404338395|gb|EJZ64842.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
Length = 726
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 159/287 (55%), Gaps = 17/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ + A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 129 IDFLKQV-NVSFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGVRPVIALTATATPKVQH 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + + + F+RPNLY K +I D+ K ++Q S IIYC ++
Sbjct: 188 DIQKNLGMLEATVFKSSFNRPNLYYEVRPKTANIDKDIIKY--IKSQEGKSGIIYCLSRK 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ ++L NGI+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 246 KVEELAELLQVNGIRALPYHAGMDSATRTQNQDAFLLEKIDVIVATIAFGMGIDKPDVRY 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C TFY D K Q + + EI K
Sbjct: 306 VIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYINKDLQKLEKFMQGKPIAEQEI---GK 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ Y E CRRK LL++F + D C CDNC
Sbjct: 363 QLLLETAAYAESSLCRRKILLHYFG--------EEYEEDNCGNCDNC 401
>gi|319954189|ref|YP_004165456.1| ATP-dependent DNA helicase recq [Cellulophaga algicola DSM 14237]
gi|319422849|gb|ADV49958.1| ATP-dependent DNA helicase RecQ [Cellulophaga algicola DSM 14237]
Length = 733
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 157/270 (58%), Gaps = 12/270 (4%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATP 178
D + FL + ++ +A+DEAHC+S+WGHDFRP YR L + L D +PI+ +TATATP
Sbjct: 127 DEYVEFLQSV-KLSFVAVDEAHCISEWGHDFRPEYRNLRSIISRLDDTIPIIGLTATATP 185
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIY 237
V +DI +L + D ++ F+RPNL+ K +I AD+ + F Q G S IIY
Sbjct: 186 KVQEDIIKNLGITDADLFKASFNRPNLFYEVRPKTQNIEADIIR---FVKQNTGKSGIIY 242
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C ++ E++ +L NG+ PYHA K R + +F+ + + VVVAT AFGMGIDK
Sbjct: 243 CLSRKKVEELAQILQVNGVSAVPYHAGFDTKTRSKYQDMFLMEGVDVVVATIAFGMGIDK 302
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSE 355
PDVR VIH+ PK + +YYQE GRAGRDG C FY D K M +P
Sbjct: 303 PDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAE--- 359
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
QE +++ + Y E RRK++L++F
Sbjct: 360 -QEIGNALLQEMVAYAETSMSRRKFILHYF 388
>gi|384098146|ref|ZP_09999265.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
gi|383836292|gb|EID75705.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
Length = 733
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 161/290 (55%), Gaps = 15/290 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
I FL R +I +A+DEAHC+S+WGHDFRP YR + + L D +PI+ +TATATP V
Sbjct: 130 IEFL-RTIQISFVAVDEAHCISEWGHDFRPEYRNIRAIIKRLGDDIPIIGLTATATPKVQ 188
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPT 240
+DI +L + D F+RPNLY K ++ AD+ + F Q G S IIYC +
Sbjct: 189 EDILKNLGMTDAKTFKASFNRPNLYYEVRPKTKNVDADIIR---FIKQNPGKSGIIYCLS 245
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ VL NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDV
Sbjct: 246 RKRVEELAQVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDV 305
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQE 358
R VIH+ PK + +YYQE GRAGRDG C FY D K M +P QE
Sbjct: 306 RFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMSGKPVAE----QE 361
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+++ + Y E RRK++L++F V D DN RH
Sbjct: 362 IGHALLQEIVAYAETSMSRRKFILHYFGEEFDEVNGEGAEMD---DNVRH 408
>gi|317479553|ref|ZP_07938681.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|316904283|gb|EFV26109.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
Length = 603
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 156/263 (59%), Gaps = 8/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGILHQLFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IKQLHLNQPRIFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI++ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KAETVAQMLQKQGIKSAVYHAGLSPARRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY AD ++ DS Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL----ILLTKFATDSGQQSINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++R+++Y E CRR+ LL++F
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF 376
>gi|398383367|ref|ZP_10541438.1| ATP-dependent DNA helicase RecQ [Sphingobium sp. AP49]
gi|397724969|gb|EJK85428.1| ATP-dependent DNA helicase RecQ [Sphingobium sp. AP49]
Length = 590
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 150/286 (52%), Gaps = 23/286 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R ++ L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DI
Sbjct: 124 LLRSAKVALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADAHTRKDIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + + +I +GFDRPN+ A V D + R+L + G ++Y PT+ E
Sbjct: 184 VQLGIPEDGLIISGFDRPNIRYA--VHPRDGLT--RQLADLLAANPGPGVVYAPTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ + L R G R YHA + R F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAETLGRGGRAVRAYHAGLDPAVRARNQAAFIASEDMVMVATVAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNN---MIFQPNLNDSEIQEHSKT 362
G PK + YYQE GRAGRDG +V + F+ DF + M +P Q+ +
Sbjct: 300 AGLPKSIEGYYQESGRAGRDGEPAVAHLFWGAEDFARARQRIMELEPAR-----QQGERA 354
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + +E TCRR LL HF + PP C CDNC
Sbjct: 355 RIAALGALVETATCRRAILLRHF---------GEDPPATCGNCDNC 391
>gi|160888701|ref|ZP_02069704.1| hypothetical protein BACUNI_01119 [Bacteroides uniformis ATCC 8492]
gi|156861600|gb|EDO55031.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
Length = 603
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 156/263 (59%), Gaps = 8/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGILHQLFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IKQLHLNQPRIFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI++ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KAETVAQMLQKQGIKSAVYHAGLSPARRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY AD ++ DS Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL----ILLTKFATDSGQQSINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++R+++Y E CRR+ LL++F
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF 376
>gi|319902947|ref|YP_004162675.1| ATP-dependent DNA helicase, RecQ-like protein [Bacteroides
helcogenes P 36-108]
gi|319417978|gb|ADV45089.1| ATP-dependent DNA helicase, RecQ-like protein [Bacteroides
helcogenes P 36-108]
Length = 603
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 155/263 (58%), Gaps = 8/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEGS-TIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F N+ G IIYC ++
Sbjct: 180 IKQLHLNQPKIFISSFDRPNLSL--TVKRGYQQKEKGKAILDFINRHPGECGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKQGIKAAIYHAGLSAAKRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATESGQQSINIE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++R+++Y E CRR+ LL++F
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF 376
>gi|307566216|ref|ZP_07628664.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
gi|307345074|gb|EFN90463.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
Length = 727
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 161/295 (54%), Gaps = 19/295 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL I ++ AIDEAHC+S+WGHDFRP YR + + PI+A+TATAT V
Sbjct: 129 IAFLKTI-KVSFYAIDEAHCISEWGHDFRPEYRKIRTAIDEIGKAPIIALTATATDKVRT 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI SL + + F+RPNLY K+++ + +++ F Q G S IIYC ++
Sbjct: 188 DIVRSLGIEGCLEFKSSFNRPNLYYEVRFKKNEDDTN-KQIIRFIKQHSGKSGIIYCLSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +L N I+ YHA + + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 247 KKVEELAAILIANDIKAAAYHAGLDSETRSKTQDQFLMEDIDVIVATIAFGMGIDKPDVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIHY PK L YYQE GRAGRDG +C FY D K + + I E
Sbjct: 307 FVIHYDIPKSLEGYYQETGRAGRDGEEGICIAFYSRNDLKK----LEKFMEGKPIAEQDI 362
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEML 412
+ +++ E Y E CRRK LL++F + P D C CDNCR+ + L
Sbjct: 363 GRQLLQETEAYAESSVCRRKLLLHYFG--------EEYPKDNCGMCDNCRNPKTL 409
>gi|160940923|ref|ZP_02088263.1| hypothetical protein CLOBOL_05815 [Clostridium bolteae ATCC
BAA-613]
gi|158436167|gb|EDP13934.1| hypothetical protein CLOBOL_05815 [Clostridium bolteae ATCC
BAA-613]
Length = 822
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 156/281 (55%), Gaps = 14/281 (4%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVT 173
RL D LS +I ++A+DEAHCVSQWG DFRPSY + + LP+ P++ A T
Sbjct: 116 RLMSEDFLRFALSSQVKISMVAVDEAHCVSQWGQDFRPSYLKIVDFINQLPERPVVSAFT 175
Query: 174 ATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG- 232
ATAT V DDI LMLR+P ++ TGF+RPNLY +D + N+ + +G
Sbjct: 176 ATATAEVRDDIIDILMLRNPQVMTTGFNRPNLYFGVQSPKDKYAT----MVNYLERHKGE 231
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
S IIYC T+ + E+VC L R G YHA +S +R+ F+ D +++VAT AFG
Sbjct: 232 SGIIYCLTRKVVEEVCGQLIREGFSVTRYHAGLSDSERRHNQEDFIYDRAQIMVATNAFG 291
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDK +VR V+HY PK++ +YYQE GRAGRDG S C Y D N N +
Sbjct: 292 MGIDKSNVRFVVHYNMPKNMESYYQEAGRAGRDGEPSECILLYGGQDVVTNQFFIDHNQD 351
Query: 353 DSE--------IQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
+ + E + ++++ Y C R Y+L +F
Sbjct: 352 NEALDPITREIVMERDRERLRKMTFYCFTNECLRDYILRYF 392
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 154/282 (54%), Gaps = 14/282 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + ++ L AIDE+HC+S+WGHDFRP YR L LR P P +A+TATATP V DI
Sbjct: 180 FLQEL-KVSLFAIDESHCISEWGHDFRPEYRQLKMLREKFPKTPFMALTATATPSVQKDI 238
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
T L L D + N F+R NL+ K + L L + + S IIYC +
Sbjct: 239 VTQLKLTDYKVFNASFNRKNLFYQIIPKDNPYHQILCVLKERKKE---SGIIYCQGRKTV 295
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + L G + PYHA +S + R E F+++ I+++VAT AFGMGIDKP+VR VI
Sbjct: 296 ESLAGSLQGEGYRALPYHAGLSAEMRTENQERFIREDIEIIVATIAFGMGIDKPNVRYVI 355
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK + YYQE GRAGRDGL S C + AD K +++E Q + +
Sbjct: 356 HYDLPKSIEGYYQETGRAGRDGLKSDCILLFSYADKIKIEYFIHQKEDENEKQA-AYQQL 414
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
K + Y E CRRK LL++F G T C+NC
Sbjct: 415 KALVSYCEGNVCRRKILLDYF-GEKFTTHN--------CENC 447
>gi|334366676|ref|ZP_08515601.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
gi|313157180|gb|EFR56610.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
Length = 730
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 162/290 (55%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +I ++ AIDEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 131 VAFLHKI-KVSFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPAPLIALTATATPKVQL 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D ++ + F+RPNLY K + D R + F Q EG S IIYC ++
Sbjct: 190 DIQKNLGMSDASVFKSSFNRPNLYYEIRPKHN---VD-RDIIRFIKQNEGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ ++L NGI+ YHA + R F+ + V+VAT AFGMGIDKPDVR
Sbjct: 246 KKVEELTELLVANGIKALAYHAGMDAATRAANQDHFLMERADVIVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHS 360
VIHY PK L YYQE GRAGRDG C TFY D K Q + + EI
Sbjct: 306 YVIHYDIPKSLEGYYQETGRAGRDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEI---G 362
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
K +++ Y E CRRK LL++F G T + C CDNCR+
Sbjct: 363 KLLLQETVSYAESSMCRRKTLLHYF-GEEYT-------EENCGNCDNCRN 404
>gi|443316688|ref|ZP_21046123.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
gi|442783715|gb|ELR93620.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
Length = 720
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 161/288 (55%), Gaps = 18/288 (6%)
Query: 125 FLSRIPRIVLIA---IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL+R+ + V +A IDEAHCVS+WGHDFRP YR L LR +P+LA+TATAT V
Sbjct: 133 FLTRLQQQVGLAGFAIDEAHCVSEWGHDFRPEYRQLHRLRSAFAGIPMLALTATATERVR 192
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI L L+ P ++ F+RPNLY K L + N G+ IIYC ++
Sbjct: 193 QDIVQQLQLQKPEVLVASFNRPNLYYEVRPKDRQTYGHLLQQVQSIN---GAGIIYCLSR 249
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+++ L +GI PYHA + R E F++D ++V+VAT AFGMGI+KPDVR
Sbjct: 250 KRVDEIALRLQNDGIAALPYHAGLPDLTRAENQRRFIRDDVRVMVATIAFGMGINKPDVR 309
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V+HY P+ L +YYQE GRAGRDG + C ++ AD + N + ++ E Q ++
Sbjct: 310 FVVHYDLPRTLESYYQESGRAGRDGEPAHCTVYFGYADVSTVNYLIDQKPDERE-QNIAR 368
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+++V Y E CRR+ L +F + + C CDNCR
Sbjct: 369 QQLRQVIDYAESTVCRRQIQLGYF---------GEFLSESCDRCDNCR 407
>gi|332291025|ref|YP_004429634.1| RecQ familyATP-dependent DNA helicase [Krokinobacter sp. 4H-3-7-5]
gi|332169111|gb|AEE18366.1| ATP-dependent DNA helicase, RecQ family [Krokinobacter sp.
4H-3-7-5]
Length = 732
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/258 (43%), Positives = 151/258 (58%), Gaps = 11/258 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
+ +AIDEAHC+S+WGHDFRP YR L ++ + D +PI+AVTATATP V +DI +L +
Sbjct: 138 VSFLAIDEAHCISEWGHDFRPEYRNLRKIIGRIGDNIPIIAVTATATPKVQEDILKNLGI 197
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D N F+RPNLY K + AD+ F Q EG S IIYC + E++
Sbjct: 198 TDANTFKASFNRPNLYYEVRPKTAQVDADI---IRFVKQNEGKSGIIYCLARKRVEELAQ 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NG++ PYHA + K R +F+ + + VVVAT AFGMGIDKPDVR VIH+ P
Sbjct: 255 TLQVNGLKAVPYHAGLDAKTRVRHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEHSKTMMKRV 367
K + +YYQE GRAGRDG C FY D K + ++ I QE +++ V
Sbjct: 315 KSIESYYQETGRAGRDGGEGHCLAFYAYKDIEK----LEKFMSGKPIAEQEIGHALLQEV 370
Query: 368 EKYLELRTCRRKYLLNHF 385
+ E RRK++L++F
Sbjct: 371 VAFAETSMSRRKFILHYF 388
>gi|311746386|ref|ZP_07720171.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
gi|126575272|gb|EAZ79604.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
Length = 725
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 175/321 (54%), Gaps = 19/321 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
I FL + + +AIDEAHC+S+WGHDFRP YR + + + P++PI+A+TATATP V
Sbjct: 124 IAFL-KSAELSFVAIDEAHCISEWGHDFRPEYRKIKTIVAQIAPNLPIIALTATATPKVQ 182
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPT 240
DI +L + + ++ + F+R NL+ K + ++L F +G S IIYC +
Sbjct: 183 QDIQRNLQMEEADLFKSSFNRTNLFYEVRPKMKN--ESKKQLIKFIKNHKGKSGIIYCLS 240
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ +L N I PYHA + R + F+ + + V+VAT AFGMGIDKPDV
Sbjct: 241 RKKVEEIAQLLQVNQINAAPYHAGLDSAIRIKNQDDFLNEELDVIVATIAFGMGIDKPDV 300
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIHY PK L YYQE GRAGRDGL C FY+ D K F + +E +E++
Sbjct: 301 RYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYRYEDIVKLEK-FNKDKPVTE-RENA 358
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRG 420
+ ++ + Y E CRRK++LN+F E+ CDNC+ + ++ G
Sbjct: 359 RVLLHEMAAYAETGVCRRKFILNYF-------GETFEKDCGYCDNCKKD-----REIFEG 406
Query: 421 GRMVVENSEVWMSTEARPGRE 441
V+ E T R G E
Sbjct: 407 MEYVLTAMEAVQQTNERFGIE 427
>gi|189502511|ref|YP_001958228.1| hypothetical protein Aasi_1165 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497952|gb|ACE06499.1| hypothetical protein Aasi_1165 [Candidatus Amoebophilus asiaticus
5a2]
Length = 724
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 161/288 (55%), Gaps = 17/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL-RLPLPDVPILAVTATATPVVI 181
+ FL + ++ IA+DEAHC+S WGHDFRP YR + + L VPI+A+TATATP V
Sbjct: 128 LAFLKQ-AKLSFIAVDEAHCISDWGHDFRPEYRNIRYVANQQLGRVPIIALTATATPRVQ 186
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L + D + F+RPNLY K++ L KL + Q G I+YC ++
Sbjct: 187 LDILNNLDINDATTFQSSFNRPNLYYEIRYKEEQANKQLIKLIKEQPQIMG--IVYCQSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+++ +L+ N I+ PYHA + R + F++ V+VAT AFGMGID PDVR
Sbjct: 245 KQVDELAALLNLNDIKAAPYHAGLDANVRVKNQEAFLQKQYNVIVATIAFGMGIDTPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L AYYQE GRAGRD L S C Y DF + + + N +E SK
Sbjct: 305 FVIHYDMPKSLEAYYQETGRAGRDSLPSTCLMLYNPEDFIRLERLNKSKPNGE--REKSK 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
+++ ++ Y+ CRRK LL +F G S D C CDNC+
Sbjct: 363 VLLEEMKGYITSGVCRRKQLLYYF-GESFA--------DHCNNCDNCK 401
>gi|117621322|ref|YP_858553.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562729|gb|ABK39677.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 611
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 160/281 (56%), Gaps = 15/281 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ +P + L AIDEAHCVSQWGHDFRP Y L L+ P VP++A+TATA D+
Sbjct: 138 LAELP-LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRSDML 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP I FDRPN+ + K A + L ++Q I+YC ++ E
Sbjct: 197 HRLELHDPFIHTASFDRPNIRYSLVEK---FKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+V + LSR+G + PYHA + L+ R+ F+KD I++VVAT AFGMGIDKP+VR V+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQRTQESFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ +YYQE GRAGRDG + Y AD + + N+ + + + + +
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD-NIENPQQLQVEQYKLN 372
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F + DK C NC
Sbjct: 373 VMAAFAEAQTCRRQVLLNYFGEYN----------DKPCGNC 403
>gi|359454206|ref|ZP_09243496.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|414070221|ref|ZP_11406208.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
gi|358048729|dbj|GAA79745.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|410807319|gb|EKS13298.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
Length = 607
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L +NQ S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKNQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + +YYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|116329332|ref|YP_799052.1| DNA helicase [Leptospira borgpetersenii serovar Hardjo-bovis str.
L550]
gi|116330064|ref|YP_799782.1| DNA helicase [Leptospira borgpetersenii serovar Hardjo-bovis str.
JB197]
gi|116122076|gb|ABJ80119.1| DNA helicase, Superfamily II [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116123753|gb|ABJ75024.1| DNA helicase, Superfamily II [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 621
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 167/308 (54%), Gaps = 29/308 (9%)
Query: 129 IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDIC 185
+P++ L IA+DEAHCVSQWGHDFRP YR L ELR +PI+A+TATATP VI DI
Sbjct: 135 LPKLPLCRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYHHQIPIVALTATATPRVIQDIF 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPT 240
SL L++P +I F R NL + Q++ + L KL NF+ G IIYC T
Sbjct: 195 NSLGLKNPTLIKGSFYRENLNFSVRFPQNETSKENELLKLLIRGNFQKTESGKAIIYCAT 254
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + + L +NG + YHA + R++ + V+VAT AFGMG+D PDV
Sbjct: 255 RQKVESIYNFLKKNGFKVGKYHAGRTDSSREKTQNGYNIGKTNVLVATNAFGMGLDNPDV 314
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R ++HY P L +YYQE GRAGRDG SS C FY +D N I N ++
Sbjct: 315 RLIVHYQIPASLESYYQEAGRAGRDGKSSNCILFYHPSDLVTQNFIIGKENN----RKGG 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH---------NEM 411
+T++ V++Y CR + L ++F ++ P K CD C N+
Sbjct: 371 ETLLSFVKEYAISNRCRHQILCSYFG--------EEIEPCKTCDVCSEKEPSNSSGRNQF 422
Query: 412 LELEQVPR 419
LE E++ +
Sbjct: 423 LEREKIKK 430
>gi|409124316|ref|ZP_11223711.1| ATP-dependent DNA helicase RecQ [Gillisia sp. CBA3202]
Length = 731
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 152/262 (58%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R I +A+DEAHC+S+WGHDFRP YR L + + D +PI+ +TATATP V +DI
Sbjct: 134 RGVEISFMAVDEAHCISEWGHDFRPEYRNLKHIIKRIGDNIPIIGLTATATPKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + D F+RPNLY K ++ +D+ + F Q EG S IIYC ++ E
Sbjct: 194 NLGITDAKTFKASFNRPNLYYEIRPKTKNVDSDIIR---FVKQNEGKSGIIYCLSRKRVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ VL NGI+ PYHA + K R + +F+ + I VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQVLQVNGIKAVPYHAGLDAKTRIKHQDMFIMEDIDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
PK L +YYQE GRAGRDG C +Y D K M +P QE +
Sbjct: 311 NDIPKSLESYYQETGRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAE----QEIGHAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ V Y E RRK+LL++F
Sbjct: 367 LQEVVGYAETSMSRRKFLLHYF 388
>gi|418720023|ref|ZP_13279221.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. UI 09149]
gi|418738459|ref|ZP_13294854.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|421095556|ref|ZP_15556269.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. 200801926]
gi|410362266|gb|EKP13306.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. 200801926]
gi|410743001|gb|EKQ91744.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. UI 09149]
gi|410745952|gb|EKQ98860.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 621
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 167/308 (54%), Gaps = 29/308 (9%)
Query: 129 IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDIC 185
+P++ L IA+DEAHCVSQWGHDFRP YR L ELR +PI+A+TATATP VI DI
Sbjct: 135 LPKLPLCRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYHHQIPIVALTATATPRVIQDIS 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPT 240
SL L++P +I F R NL Q++ + L KL NF+ G IIYC T
Sbjct: 195 NSLGLKNPTLIKGSFYRENLNFCVRFPQNETSKENELLKLLIRGNFQKTESGKAIIYCAT 254
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + + L +NG + YHA + R++ + V+VAT AFGMG+D PDV
Sbjct: 255 RQKVESIYNFLKKNGFKVGKYHAGRTDSSREKTQNGYNIGKTNVLVATNAFGMGLDNPDV 314
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R ++HY P L +YYQE GRAGRDG SS C FY +D N I N ++
Sbjct: 315 RLIVHYQIPASLESYYQEAGRAGRDGKSSNCILFYHPSDLVTQNFIIGKENN----RKGG 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH---------NEM 411
+T++ V++Y CR++ L ++F ++ P K CD C N+
Sbjct: 371 ETLLSFVKEYAISNRCRQQILCSYFG--------EEIEPCKTCDVCSEKEPSNSSGRNQF 422
Query: 412 LELEQVPR 419
LE E++ +
Sbjct: 423 LEREKIKK 430
>gi|409401711|ref|ZP_11251398.1| ATP-dependent DNA helicase RecQ [Acidocella sp. MX-AZ02]
gi|409129597|gb|EKM99441.1| ATP-dependent DNA helicase RecQ [Acidocella sp. MX-AZ02]
Length = 609
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/295 (42%), Positives = 162/295 (54%), Gaps = 17/295 (5%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL +PD L + RI LIAIDEAHCVSQWGHDFRP Y LS+L P VP +A+TA
Sbjct: 125 RLLMPD--FLEMMDGARIALIAIDEAHCVSQWGHDFRPEYLGLSQLAERFPGVPRMALTA 182
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-S 233
TA P DI L L + + + FDRPN+ A K+ A LR+L F EG S
Sbjct: 183 TADPQTRQDIAQRLGLEEAPLFLSSFDRPNIRYAVLRKE----APLRQLQTFLRAHEGES 238
Query: 234 TIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFV-KDLIKVVVATCAFG 292
I+YC ++ E+ L+++GI+ PYHA + + R F+ + V+VAT AFG
Sbjct: 239 GIVYCLSRNSVEQTAAALNQHGIRALPYHAGMPAETRAANQDEFLTTEEGLVLVATVAFG 298
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNL 351
MGIDKPDVR V+H P L AYYQE GRAGRDGL + Y D + MI Q N
Sbjct: 299 MGIDKPDVRFVVHLDLPSSLEAYYQETGRAGRDGLPAETLLLYGMQDLVLRRGMIEQSN- 357
Query: 352 NDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+EI++ + + + E TCRR+ +L HF E+ P CDNC
Sbjct: 358 APAEIKQVERRKLDSLLGVCETITCRRQAILAHF-------GETLAQPCGNCDNC 405
>gi|86133525|ref|ZP_01052107.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85820388|gb|EAQ41535.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 727
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 153/266 (57%), Gaps = 11/266 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL R I +AIDEAHC+S+WGHDFRP YR L + + +VP++ +TATAT V +
Sbjct: 125 VTFL-RTQTISFVAIDEAHCISEWGHDFRPEYRNLKHIIKAIDNVPVICLTATATEKVQE 183
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D N F+RPNL+ K ++ D+ + F Q EG S IIYC ++
Sbjct: 184 DILKTLGITDANRFKASFNRPNLFYEVRPKTKEVEKDIIR---FVKQREGKSGIIYCLSR 240
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +L NGI+ PYHA + K R + +F+ + VVVAT AFGMGIDKPDVR
Sbjct: 241 KKVEEIAQILQVNGIKAVPYHAGLDAKTRVKHQDMFLMEDCDVVVATIAFGMGIDKPDVR 300
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIH+ PK L +YYQE GRAGRD C FY D K M +P QE
Sbjct: 301 YVIHHDIPKSLESYYQETGRAGRDDGEGYCLAFYAYKDIEKLEKFMASKPVAE----QEI 356
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRKYLL++F
Sbjct: 357 GHALLQEVVGYAETSMNRRKYLLHYF 382
>gi|357054028|ref|ZP_09115119.1| ATP-dependent DNA helicase RecQ [Clostridium clostridioforme
2_1_49FAA]
gi|355384913|gb|EHG31966.1| ATP-dependent DNA helicase RecQ [Clostridium clostridioforme
2_1_49FAA]
Length = 627
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 156/281 (55%), Gaps = 14/281 (4%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVT 173
RL D LS +I ++A+DEAHCVSQWG DFRPSY + + LPD P++ A T
Sbjct: 115 RLMSEDFLRFALSGQVKISMVAVDEAHCVSQWGQDFRPSYLKIVDFINQLPDRPVVSAFT 174
Query: 174 ATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG- 232
ATAT V DDI LMLR+P ++ TGF+RPNLY A +D + N+ + +G
Sbjct: 175 ATATAQVRDDIIDILMLRNPQVMTTGFNRPNLYFAVQSPKDKYAT----MVNYLERHKGE 230
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
S IIYC T+ + E+VC L R G YHA +S + + F+ D +++VAT AFG
Sbjct: 231 SGIIYCLTRKVVEEVCSQLIREGFSVTRYHAGLSDSEHRHNQEDFIYDRAQIMVATNAFG 290
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDK +VR V+HY PK++ +YYQE GRAGRDG S C Y D N N +
Sbjct: 291 MGIDKSNVRFVVHYNMPKNMESYYQEAGRAGRDGEPSECILLYGGQDVVTNQFFIDHNQD 350
Query: 353 DSE--------IQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
+ + E + ++++ Y C R Y+L +F
Sbjct: 351 NEALDPVTREIVMERDRERLRKMTFYCFTNECLRDYILRYF 391
>gi|288924568|ref|ZP_06418505.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
gi|288338355|gb|EFC76704.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
Length = 740
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 154/291 (52%), Gaps = 17/291 (5%)
Query: 121 VPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVV 180
V FL + +I A+DEAHC+S+WGHDFRP YR + + L PI+A+TATAT V
Sbjct: 140 VKFSFLEEV-KISFYAVDEAHCISEWGHDFRPEYRNIRKAIDILGRAPIIALTATATDKV 198
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCP 239
DI +L + D + F+R NLY K DI ++ F Q G S IIYC
Sbjct: 199 RTDIKKTLGISDAKEFKSSFNRSNLYYEVRQKSADIDT---QIVKFVKQHAGKSGIIYCL 255
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPD
Sbjct: 256 SRKKVEELAAVLKVNEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPD 315
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDG C FY D K + Q+
Sbjct: 316 VRFVIHYDIPKSLEGYYQETGRAGRDGGEGYCLVFYSPKDLKKLEKFMEGKAVAE--QDI 373
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ +++ + Y E CRRK LL++F G T D C CDNC H
Sbjct: 374 GRQLLQETKAYAESSVCRRKMLLHYF-GEEYT-------KDNCGMCDNCLH 416
>gi|303236792|ref|ZP_07323371.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
gi|302482960|gb|EFL45976.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
Length = 750
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 157/284 (55%), Gaps = 14/284 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R ++ AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI S
Sbjct: 156 RTVKVSFYAIDEAHCISEWGHDFRPEYRKIRQAVDQIGKAPIIALTATATDKVRSDIVKS 215
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L + + + F+R NLY K+++ + R++ F Q +G S IIYC ++ E+
Sbjct: 216 LGIEGCSEFKSSFNRANLYYEVRPKKNEEDTN-RQIIKFIKQNQGKSGIIYCLSRKKVEE 274
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ VL N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 275 LAAVLQANEIKAEPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHY 334
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK L YYQE GRAGRDG C FY D K F SE Q+ + +++
Sbjct: 335 DIPKSLEGYYQETGRAGRDGEEGKCIVFYSKNDLKKLEK-FMEGKPVSE-QDIGRQLLQE 392
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
E Y E CRRK LL++F + D C CDNC H
Sbjct: 393 TETYAESSVCRRKLLLHYFG--------EEYLKDNCGMCDNCLH 428
>gi|261494329|ref|ZP_05990823.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309978|gb|EEY11187.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 599
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 159/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I IA+DEAHCVSQWGHDFRP Y L LR PDVP++A+TATA P DI L L
Sbjct: 131 KISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPDVPLMALTATADPTTRSDILHHLRL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
P+I FDRPN+ K L +L F ++ +G S I+YC ++ E++ +
Sbjct: 191 NSPHIYLGSFDRPNIRYTVQEK----FKPLEQLIKFISKQQGKSGIVYCNSRKKVEEITE 246
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS I YHA +S +QR+ + F +D I++VVAT AFGMGI+K +VR V+H+ P
Sbjct: 247 KLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIAFGMGINKSNVRFVVHFDLP 306
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY +D+ + ++ +P I++H ++ +
Sbjct: 307 RSIESYYQETGRAGRDDLPSEAVLFYDPSDYAWLQKILLEEPESEQRNIKQHK---LQAI 363
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F E + K CD C
Sbjct: 364 GDFAESQTCRRLVLLNYF-------GEHRQEQCKNCDIC 395
>gi|372223763|ref|ZP_09502184.1| RecQ familyATP-dependent DNA helicase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 733
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 152/258 (58%), Gaps = 11/258 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I +A+DEAHC+S+WGHDFRP YR L ++ L D +PI+ +TATATP V +DI +L +
Sbjct: 138 ISFVAVDEAHCISEWGHDFRPEYRNLRKIISRLGDNIPIIGLTATATPKVQEDIIKNLGM 197
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D + F+RPNL+ K ++ AD+ + F Q G S I+YC ++ E++
Sbjct: 198 VDAKVFKASFNRPNLFYEVRPKTKNVDADIIR---FVKQNSGKSGIVYCLSRKKVEELAQ 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL NGI PYHA K R + +F+ + + VVVAT AFGMGIDKPDVR VIH+ P
Sbjct: 255 VLQVNGISAVPYHAGFDAKTRAKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K + +YYQE GRAGRDG C +Y D K M +P QE + +++ +
Sbjct: 315 KSIESYYQETGRAGRDGGEGHCLAYYAYKDVEKLEKFMSGKPVAE----QEIGQALLQEI 370
Query: 368 EKYLELRTCRRKYLLNHF 385
Y E RRK++L++F
Sbjct: 371 VAYAETSMSRRKFILHYF 388
>gi|94496001|ref|ZP_01302580.1| ATP-dependent DNA helicase RecQ [Sphingomonas sp. SKA58]
gi|94424693|gb|EAT09715.1| ATP-dependent DNA helicase RecQ [Sphingomonas sp. SKA58]
Length = 591
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 148/283 (52%), Gaps = 17/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R +I L AIDEAHCVS+WGHDFRP YR L L P VP LA+TATA DI
Sbjct: 124 LLRSAKIALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPQVPRLALTATADAHTRADIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + + +I +GFDRPN+ A ++ R+L + Q G ++Y T+ E
Sbjct: 184 VQLGIPEDGLIISGFDRPNIRYAVHSRE----GLTRQLADLLAQHPGPGVVYAQTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ + L R G R YHA + R F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAETLGRGGRAVRAYHAGMDPATRAANQAAFIASEDMVMVATVAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
G PK + YYQE GRAGRDG +V + F+ DF + + L + Q+ + +
Sbjct: 300 AGLPKSIEGYYQESGRAGRDGEPAVAHLFWGAEDFARARLRIA-ELEPAR-QQGERARIA 357
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E TCRR LL HF + PP C CDNC
Sbjct: 358 ALGALVETATCRRAILLRHF---------GESPPPTCGNCDNC 391
>gi|315607430|ref|ZP_07882426.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
gi|315250862|gb|EFU30855.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
Length = 740
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 154/291 (52%), Gaps = 17/291 (5%)
Query: 121 VPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVV 180
V FL + +I A+DEAHC+S+WGHDFRP YR + + L PI+A+TATAT V
Sbjct: 140 VKFSFLEEV-KISFYAVDEAHCISEWGHDFRPEYRNIRKAIDILGRAPIIALTATATDKV 198
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCP 239
DI +L + D + F+R NLY K DI ++ F Q G S IIYC
Sbjct: 199 RTDIKKTLGISDAKEFKSSFNRSNLYYEVRQKSADIDT---QIVKFVKQHAGKSGIIYCL 255
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPD
Sbjct: 256 SRKKVEELAAVLKVNEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPD 315
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDG C FY D K + Q+
Sbjct: 316 VRFVIHYDIPKSLEGYYQETGRAGRDGGEGYCLVFYSPKDLKKLEKFMEGKAVAE--QDI 373
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ +++ + Y E CRRK LL++F G T D C CDNC H
Sbjct: 374 GRQLLQETKAYAESSVCRRKMLLHYF-GEEYT-------KDNCGMCDNCLH 416
>gi|456890644|gb|EMG01448.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. 200701203]
Length = 481
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 167/308 (54%), Gaps = 29/308 (9%)
Query: 129 IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDIC 185
+P++ L IA+DEAHCVSQWGHDFRP YR L ELR +PI+A+TATATP VI DI
Sbjct: 135 LPKLPLCRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYHHQIPIVALTATATPRVIQDIS 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPT 240
SL L++P +I F R NL Q++ + L KL NF+ G IIYC T
Sbjct: 195 NSLGLKNPTLIKGSFYRENLNFCVRFPQNETSKENELLKLLIRGNFQKTESGKAIIYCAT 254
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + + L +NG + YHA + R++ + V+VAT AFGMG+D PDV
Sbjct: 255 RQKVESIYNFLKKNGFKVGKYHAGRTDSSREKTQNGYNIGKTNVLVATNAFGMGLDNPDV 314
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R ++HY P L +YYQE GRAGRDG SS C FY +D N I N ++
Sbjct: 315 RLIVHYQIPASLESYYQEAGRAGRDGKSSNCILFYHPSDLVTQNFIIGKENN----RKGG 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH---------NEM 411
+T++ V++Y CR++ L ++F ++ P K CD C N+
Sbjct: 371 ETLLSFVKEYAISNRCRQQILCSYFG--------EEIEPCKTCDVCSEKEPSNSSGRNQF 422
Query: 412 LELEQVPR 419
LE E++ +
Sbjct: 423 LEREKIKK 430
>gi|402307191|ref|ZP_10826218.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
gi|400379031|gb|EJP31880.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
Length = 740
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 154/291 (52%), Gaps = 17/291 (5%)
Query: 121 VPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVV 180
V FL + +I A+DEAHC+S+WGHDFRP YR + + L PI+A+TATAT V
Sbjct: 140 VKFSFLEEV-KISFYAVDEAHCISEWGHDFRPEYRNIRKAIDILGRAPIIALTATATDKV 198
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCP 239
DI +L + D + F+R NLY K DI ++ F Q G S IIYC
Sbjct: 199 RTDIKKTLGISDAKEFKSSFNRSNLYYEVRQKSADIDT---QIVKFVKQHAGKSGIIYCL 255
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPD
Sbjct: 256 SRKKVEELAAVLKVNEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPD 315
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIHY PK L YYQE GRAGRDG C FY D K + Q+
Sbjct: 316 VRFVIHYDIPKSLEGYYQETGRAGRDGGEGYCLVFYSPKDLKKLEKFMEGKAVAE--QDI 373
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ +++ + Y E CRRK LL++F G T D C CDNC H
Sbjct: 374 GRQLLQETKAYAESSVCRRKMLLHYF-GEEYT-------KDNCGMCDNCLH 416
>gi|386820490|ref|ZP_10107706.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386425596|gb|EIJ39426.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 733
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 158/285 (55%), Gaps = 14/285 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR + + L D +PI+A+TATATP V +DI
Sbjct: 134 RTVKISFVAVDEAHCISEWGHDFRPEYRNIRTIIQRLGDDIPIIALTATATPKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + + F+RPNLY K ++ AD+ + F Q EG S IIYC ++ E
Sbjct: 194 NLGVNSAEVYKASFNRPNLYYEVRPKTKNVDADIIR---FVKQNEGKSGIIYCLSRKRVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L NG++ PYHA + K R +F+ + +VVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQTLQVNGLKAVPYHAGLDAKTRARHQDMFLMEDTDIVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK + +YYQE GRAGRDG C FY D K M +P QE +
Sbjct: 311 HDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAE----QEVGHAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++ + Y E RRKY+L++F V D DN RH
Sbjct: 367 LQDMVAYAETSMSRRKYILHYFGEEFDEVNGEGADMD---DNIRH 408
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/298 (42%), Positives = 164/298 (55%), Gaps = 11/298 (3%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
IDEAHCVSQWGHDFRP Y+ L LR P VP++A+TATATP V DI L + DP
Sbjct: 149 FVIDEAHCVSQWGHDFRPDYKKLCVLRKSFPGVPMMALTATATPRVRRDILHQLGMTDPR 208
Query: 195 IINTGFDRPNLYLAASVKQ-DDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCDVLS 252
F+R NL+ + K+ ++ +L N ++F T I+YC ++ CE V D L
Sbjct: 209 WFVQSFNRTNLHYSVMPKKVKSATKEVLELIN--SRFRSKTGIVYCLSRKECETVSDELC 266
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
RNG YHA +S K+R I L+ + KV+ AT AFGMGIDKPDVR VIHY PK +
Sbjct: 267 RNGTSACAYHAGMSDKERARIQDLW-PEHYKVICATIAFGMGIDKPDVRFVIHYSLPKSV 325
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK---RVEK 369
YYQE GRAGRDG +S C FY D K M +++ E K M R+ +
Sbjct: 326 EGYYQESGRAGRDGEASDCILFYNYHD--KMRMQKLIHMDKEATYESRKVHMDNLLRMVQ 383
Query: 370 YLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
Y E + CRR LL++F + P CDNC+ E++ V +MVVE
Sbjct: 384 YCENESDCRRAQLLHYFGETDFNPELCTSDPRTTCDNCKLEGAFEMKDVTTEAKMVVE 441
>gi|404406052|ref|ZP_10997636.1| ATP-dependent DNA helicase RecQ [Alistipes sp. JC136]
Length = 730
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 163/290 (56%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +I ++ AIDEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 131 VAFLHKI-KVSFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGAAPLIALTATATPKVQL 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D ++ + F+R NLY K++ D R + F Q EG S IIYC ++
Sbjct: 190 DIQKNLGMSDASVFKSSFNRANLYYEIRPKRN---VD-RDIIRFIKQNEGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ ++L NGI+ YHA + R F+ + ++V+VAT AFGMGIDKPDVR
Sbjct: 246 KKVEELTELLVANGIRALAYHAGMDAVTRAANQDDFLMERVEVIVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHS 360
VIHY PK L YYQE GRAGRDG C TFY D K Q + + EI
Sbjct: 306 YVIHYDIPKSLEGYYQETGRAGRDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEI---G 362
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
K ++ Y E CRRK LL++F G T D C CDNCR+
Sbjct: 363 KLLLLETVSYAESSMCRRKTLLHYF-GEDYT-------EDNCGNCDNCRN 404
>gi|379729697|ref|YP_005321893.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
gi|378575308|gb|AFC24309.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
Length = 737
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 166/290 (57%), Gaps = 18/290 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDD 183
FLS+I ++ +A+DEAHC+S+WGHDFRP YR + + + ++PI+A+TATATP V D
Sbjct: 132 FLSQI-KVSFVAVDEAHCISEWGHDFRPEYRRIRSMIENIEQEIPIIALTATATPKVRMD 190
Query: 184 ICTSLMLRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCP 239
I +L L +P F+R NL+ + K++D+ LR++ F + S IIY
Sbjct: 191 IVKTLRLEEPREFMDSFNRDNLFYEVQPKGKKEDV---LRRIVQFIKDKAPNESGIIYVQ 247
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
+ E+V VLS N I+ PYHA + K R + F+ + + V+VAT AFGMGIDKPD
Sbjct: 248 NRKTTEEVAKVLSVNDIKAAPYHAGLEAKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPD 307
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--Q 357
VR VIHY PK + YYQE GRAGRDG + C TFY D + + L D + +
Sbjct: 308 VRFVIHYDIPKSIENYYQETGRAGRDGQHAHCLTFYSYKDILR----LEKFLRDKPVAER 363
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
E ++ + Y E CRR++LL++F + D+ CDNC+
Sbjct: 364 EMGAQLLAEMIAYAETTACRRRFLLHYF---GEKYKDEVCRRDQMCDNCK 410
>gi|375014002|ref|YP_004990990.1| ATP-dependent DNA helicase RecQ [Owenweeksia hongkongensis DSM
17368]
gi|359349926|gb|AEV34345.1| ATP-dependent DNA helicase RecQ [Owenweeksia hongkongensis DSM
17368]
Length = 731
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 150/279 (53%), Gaps = 11/279 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHC+S+WGHDFRP YR L + + P++A+TATATP V DI +L +
Sbjct: 136 ISFYAIDEAHCISEWGHDFRPEYRNLKNIITAIGRKPVIALTATATPKVQGDIQKNLGMD 195
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
D + F+RPNLY K + + D+ K + S IIYC ++ E++ + L
Sbjct: 196 DAQVFKASFNRPNLYYEVRPKTEHVDRDIIKF--IKGHMGKSGIIYCLSRKKVEELAETL 253
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR V+HY PK
Sbjct: 254 QVNGINALPYHAGLDAKSRVRHQDAFLMEEADVIVATIAFGMGIDKPDVRFVMHYDMPKS 313
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM--MKRVEK 369
L +YYQE GRAGRDG +C FY D K + L+ + E M ++ V
Sbjct: 314 LESYYQETGRAGRDGGEGICIAFYAYKDIEK----LEKFLHGKPVSEQEVGMQLLQEVVA 369
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ E RRK++L++F E P K DN +H
Sbjct: 370 FAETSMNRRKFILHYF---GEEFDEENGPGAKNDDNSQH 405
>gi|345866766|ref|ZP_08818787.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
gi|344048686|gb|EGV44289.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
Length = 733
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 152/262 (58%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR L + + D +PI+ +TATATP V +DI
Sbjct: 134 RSVKISFMAVDEAHCISEWGHDFRPEYRNLKSIIERIGDNIPIIGLTATATPKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + D F+RPNLY K + AD+ + F ++EG S I+YC ++ E
Sbjct: 194 NLNINDAKTFKASFNRPNLYYEVRPKTKHVDADIIR---FVKKYEGKSGIVYCLSRKRVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L NGI+ PYHA + K R +F+ + + VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQTLQVNGIKAVPYHAGLDAKSRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK + +YYQE GRAGRDG C FY D K M +P QE +
Sbjct: 311 HDIPKSIESYYQETGRAGRDGGEGYCLAFYAYKDIEKLEKFMSGKPVAE----QEIGHAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ V + E RRK++L++F
Sbjct: 367 LQEVVAFAETSISRRKFILHYF 388
>gi|154494364|ref|ZP_02033684.1| hypothetical protein PARMER_03719 [Parabacteroides merdae ATCC
43184]
gi|154085808|gb|EDN84853.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 729
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 156/290 (53%), Gaps = 17/290 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL ++ I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP
Sbjct: 129 DENVEFLRQV-NISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPK 187
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D ++ + F+R NLY K +I R++ + EG S IIYC
Sbjct: 188 VQHDIQKNLGMIDASVFKSSFNRSNLYYEIRPKTANID---REIIKYIKSNEGKSGIIYC 244
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E+ D+L NGI+ PYHA + +QR F+ + V+VAT AFGMGIDKP
Sbjct: 245 LSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKP 304
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG C FY D K Q QE
Sbjct: 305 DVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QE 362
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
K ++ Y E CRRK LL++F + + C CDNC
Sbjct: 363 IGKQLLLETAAYAETSVCRRKVLLHYFG--------EEYLEENCGNCDNC 404
>gi|298372729|ref|ZP_06982719.1| ATP-dependent DNA helicase RecQ [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275633|gb|EFI17184.1| ATP-dependent DNA helicase RecQ [Bacteroidetes oral taxon 274 str.
F0058]
Length = 726
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 155/286 (54%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL +I +I A+DEAHC+S+WGHDFRP YR + ++ + PI+A+TATATP V DI
Sbjct: 127 FLRKI-KISFYAVDEAHCISEWGHDFRPEYRRIRQIINRIGVAPIIALTATATPKVQQDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + + + F+R NLY K +I D+ K ++Q S I+YC ++
Sbjct: 186 QKTLDMTNATVFKSSFNRENLYYEVRPKTQNIEKDIIKY--IKSQGRKSGIVYCLSRKRV 243
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ + L NGI PYHA + R + F+ + V+VAT AFGMGIDKPDVR VI
Sbjct: 244 EELAESLCLNGISALPYHAGLDAAVRSQNQDFFLMEKCDVIVATIAFGMGIDKPDVRYVI 303
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H PK L YYQE GRAGRDG C FY D K Q N QE K ++
Sbjct: 304 HNDIPKSLEGYYQETGRAGRDGGEGNCILFYSRKDLQKLEKFMQGKPNSE--QEIGKQLL 361
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
Y E CRRK LL++F + P D C CDNC H
Sbjct: 362 VEAASYAESSICRRKMLLHYFG--------EEYPHDNCCNCDNCLH 399
>gi|260062261|ref|YP_003195341.1| ATP-dependent DNA helicase [Robiginitalea biformata HTCC2501]
gi|88783823|gb|EAR14994.1| putative ATP-dependent DNA helicase [Robiginitalea biformata
HTCC2501]
Length = 733
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 148/256 (57%), Gaps = 11/256 (4%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+AIDEAHC+S+WGHDFRP YR L + RL D+PI+A+TATATP V +DI +L +
Sbjct: 140 FVAIDEAHCISEWGHDFRPEYRNLRSIIDRLG-DDIPIIALTATATPKVQEDILKNLGIP 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ + F+RPNLY K ++ AD+ + + S IIYC ++ E++ VL
Sbjct: 199 EAEVFKASFNRPNLYYEVQPKTKNVDADIIRFV--KKNAGKSGIIYCLSRKRVEELAQVL 256
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
NG+ PYHA K R +F+ + + VVVAT AFGMGIDKPDVR VIH+ PK
Sbjct: 257 QVNGVSAVPYHAGFDAKTRSRYQDMFLMEEVDVVVATIAFGMGIDKPDVRYVIHHDIPKS 316
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDG C FY D K M +P QE +++ +
Sbjct: 317 IESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMAGKPVAE----QEIGNALLQEIVA 372
Query: 370 YLELRTCRRKYLLNHF 385
Y E RRK++L++F
Sbjct: 373 YAETSVSRRKFILHYF 388
>gi|386320424|ref|YP_006016586.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|416111385|ref|ZP_11592598.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|442315223|ref|YP_007356526.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
gi|315022665|gb|EFT35690.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|325334967|gb|ADZ11241.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|441484146|gb|AGC40832.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
Length = 734
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 157/282 (55%), Gaps = 16/282 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I +AIDEAHC+S+WGHDFRP YR L + + +VP++A+TATATP V DDI +L +
Sbjct: 138 ISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTATATPKVQDDIQKTLGMS 197
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
D + F+RPNL+ K D +++ F N+ +G S I+YC ++ E+
Sbjct: 198 DAVVFKESFNRPNLFYEVRPKVDV----EKEIVKFINKNKGKSGIVYCLSRKKVEEFAQT 253
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR VIHY PK
Sbjct: 254 LQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPK 313
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEK 369
L +YYQE GRAGRDG C FY D K + Q ++++ E+ ++ V
Sbjct: 314 SLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEV---GLQLLNEVVG 370
Query: 370 YLELRTCRRKYLLNHF-------KGSSVTVAESQVPPDKCCD 404
Y E RR+Y+L +F G+ + ++ V P K D
Sbjct: 371 YAETSMSRRQYILYYFGEEFDPINGAGAKMDDNSVNPPKLKD 412
>gi|407452782|ref|YP_006724507.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
gi|403313766|gb|AFR36607.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
Length = 734
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 157/282 (55%), Gaps = 16/282 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I +AIDEAHC+S+WGHDFRP YR L + + +VP++A+TATATP V DDI +L +
Sbjct: 138 ISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTATATPKVQDDIQKTLGMS 197
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
D + F+RPNL+ K D +++ F N+ +G S I+YC ++ E+
Sbjct: 198 DAVVFKESFNRPNLFYEVRPKVDV----EKEIVKFINKNKGKSGIVYCLSRKKVEEFAQT 253
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR VIHY PK
Sbjct: 254 LQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPK 313
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEK 369
L +YYQE GRAGRDG C FY D K + Q ++++ E+ ++ V
Sbjct: 314 SLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEV---GLQLLNEVVG 370
Query: 370 YLELRTCRRKYLLNHF-------KGSSVTVAESQVPPDKCCD 404
Y E RR+Y+L +F G+ + ++ V P K D
Sbjct: 371 YAETSMSRRQYILYYFGEEFDPINGAGAKMDDNSVNPPKLKD 412
>gi|218262311|ref|ZP_03476825.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
gi|218223462|gb|EEC96112.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
Length = 729
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 156/290 (53%), Gaps = 17/290 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL ++ I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP
Sbjct: 129 DENVEFLRQV-NISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPK 187
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D ++ + F+R NLY K +I R++ + EG S IIYC
Sbjct: 188 VQHDIQKNLGMIDASVFKSSFNRSNLYYEIRPKTANID---REIIKYIKSNEGKSGIIYC 244
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E+ D+L NGI+ PYHA + +QR F+ + V+VAT AFGMGIDKP
Sbjct: 245 LSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKP 304
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG C FY D K Q QE
Sbjct: 305 DVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QE 362
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
K ++ Y E CRRK LL++F + + C CDNC
Sbjct: 363 IGKQLLLETAAYAETSVCRRKVLLHYFG--------EEYLEENCGNCDNC 404
>gi|402495443|ref|ZP_10842169.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 702
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 158/277 (57%), Gaps = 18/277 (6%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIAIDEAHC+S WGHDFRP+Y L L+ P PI+A+TATA +DI L L +
Sbjct: 136 LIAIDEAHCISAWGHDFRPAYTQLGYLKNRFPTTPIIALTATADKATREDISKQLNLNNA 195
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSR 253
+ + FDRPNL L D + L+ + + N S IIYC ++ E + + L
Sbjct: 196 TLHLSSFDRPNLSLEVRPGIDRVKKILQFVDDHPND---SGIIYCLSRKTTESLAEKLES 252
Query: 254 NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
G + + YHA + R+++ F+ D +++V AT AFGMGIDK +VR VIHY PK++
Sbjct: 253 AGFKAKAYHAGLGHHIREQVQNEFINDQLQIVCATVAFGMGIDKSNVRWVIHYNLPKNIE 312
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQEIGRAGRDG++S F+ AD + F N ++E+Q + R+++Y +
Sbjct: 313 GYYQEIGRAGRDGVASKTILFHSYADVVQLQQ-FATNSGNTEVQ---LAKLDRMQQYADA 368
Query: 374 RTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+CRRK LL++F ++P C CD C+H
Sbjct: 369 LSCRRKVLLSYF---------GEIPEKDCGNCDVCKH 396
>gi|329955315|ref|ZP_08296223.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328525718|gb|EGF52742.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 604
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 161/284 (56%), Gaps = 18/284 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGILHRQFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IRQLHLNHPRIFISSFDRPNLSL--TVKRGYRQKEKSKTILDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKQGIRTAVYHAGLSPARRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ DS + +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATDSGQEGINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++R+++Y E CRR+ LL++F ++ D C NC
Sbjct: 354 KLQRMQQYAESDICRRRILLSYFGETA----------DHDCGNC 387
>gi|224540740|ref|ZP_03681279.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517639|gb|EEF86744.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
Length = 602
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + +R P++P++A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMGFIREMFPNIPVIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + + FDRPNL L +VK+ + K + +F ++ G S IIYC ++
Sbjct: 180 VRQLHLNQPKVFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIDRHRGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + G++ YHA +S +R E F+ D +++V AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKQGLRVAVYHAGLSSARRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATESGQQGINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADVCRRRILLSYF-------GEATTEDCGNCDVCKN 392
>gi|124004539|ref|ZP_01689384.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123990111|gb|EAY29625.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 728
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 156/263 (59%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I +AIDEAHC+S+WGHDFRP YR + ++ L ++PI+A+TATATP V DI
Sbjct: 130 FLKK-AQISFVAIDEAHCISEWGHDFRPEYRKIRQIIDNLGNLPIIALTATATPKVQQDI 188
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + D ++ + F+RPNLY K I + + +N+ S IIYC ++
Sbjct: 189 QRNLQMEDASVFKSSFNRPNLYYEVRPK---IHVKKQLIKYLKNKKGESGIIYCLSRKKV 245
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ + L N I+ PYHA + R F+ + ++VAT AFGMGIDKPDVRCVI
Sbjct: 246 EEIYEFLKVNDIKALPYHAGLDSSVRMRNQDAFLNEDADIIVATIAFGMGIDKPDVRCVI 305
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE--HSKT 362
HY APK L YYQE GRAGRDGL++ C FY D K + D + E +++
Sbjct: 306 HYDAPKSLEGYYQETGRAGRDGLNADCIMFYSPNDIQK----LEKFNKDKPVTERDNARH 361
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++ + Y CRR+ LL++F
Sbjct: 362 LLQEMMDYATSGVCRRRQLLHYF 384
>gi|392556563|ref|ZP_10303700.1| ATP-dependent DNA helicase [Pseudoalteromonas undina NCIMB 2128]
Length = 607
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFTHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L ++Q S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|313205605|ref|YP_004044782.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383484930|ref|YP_005393842.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312444921|gb|ADQ81276.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459615|gb|AFD55299.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 734
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 157/282 (55%), Gaps = 16/282 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I +AIDEAHC+S+WGHDFRP YR L + + +VP++A+TATATP V DDI +L +
Sbjct: 138 ISFVAIDEAHCISEWGHDFRPEYRNLKGIIDKIANVPVIALTATATPKVQDDIQKTLGMS 197
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
D + F+RPNL+ K D +++ F N+ +G S I+YC ++ E+
Sbjct: 198 DAVVFKESFNRPNLFYEVRPKVDV----EKEIVKFINKNKGKSGIVYCLSRKKVEEFAQT 253
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L NGI PYHA + K R F+ + V+VAT AFGMGIDKPDVR VIHY PK
Sbjct: 254 LQVNGINALPYHAGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPK 313
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEK 369
L +YYQE GRAGRDG C FY D K + Q ++++ E+ ++ V
Sbjct: 314 SLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKSVSEKEV---GLQLLNEVVG 370
Query: 370 YLELRTCRRKYLLNHF-------KGSSVTVAESQVPPDKCCD 404
Y E RR+Y+L +F G+ + ++ V P K D
Sbjct: 371 YAETSMSRRQYILYYFGEEFDPINGAGAKMDDNSVNPPKLKD 412
>gi|423343078|ref|ZP_17320792.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|409216754|gb|EKN09737.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 726
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 156/290 (53%), Gaps = 17/290 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL ++ I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP
Sbjct: 126 DENVEFLRQV-NISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D ++ + F+R NLY K +I R++ + EG S IIYC
Sbjct: 185 VQHDIQKNLGMIDASVFKSSFNRSNLYYEIRPKTANID---REIIKYIKSNEGKSGIIYC 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E+ D+L NGI+ PYHA + +QR F+ + V+VAT AFGMGIDKP
Sbjct: 242 LSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG C FY D K Q QE
Sbjct: 302 DVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QE 359
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
K ++ Y E CRRK LL++F + + C CDNC
Sbjct: 360 IGKQLLLETAAYAETSVCRRKVLLHYFG--------EEYLEENCGNCDNC 401
>gi|423725451|ref|ZP_17699588.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409234575|gb|EKN27403.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 156/290 (53%), Gaps = 17/290 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL ++ I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP
Sbjct: 126 DENVEFLRQV-NISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D ++ + F+R NLY K +I R++ + EG S IIYC
Sbjct: 185 VQHDIQKNLGMIDASVFKSSFNRSNLYYEIRPKTANID---REIIKYIKSNEGKSGIIYC 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E+ D+L NGI+ PYHA + +QR F+ + V+VAT AFGMGIDKP
Sbjct: 242 LSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG C FY D K Q QE
Sbjct: 302 DVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QE 359
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
K ++ Y E CRRK LL++F + + C CDNC
Sbjct: 360 IGKQLLLETAAYAETSVCRRKVLLHYFG--------EEYLEENCGNCDNC 401
>gi|329960081|ref|ZP_08298545.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328533033|gb|EGF59806.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 603
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 154/263 (58%), Gaps = 8/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGILHQQFPHVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL LA VK+ + K + +F + G S +IYC ++
Sbjct: 180 IKQLHLEQPKIFISSFDRPNLSLA--VKRGYQQKEKSKAILDFIGRHPGESGVIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S +R F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKQGIKAAVYHAGLSADKRDRAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATESGQQSINIE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++R+++Y E CRR+ LL++F
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF 376
>gi|423346935|ref|ZP_17324622.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409218596|gb|EKN11564.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 156/290 (53%), Gaps = 17/290 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL ++ I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP
Sbjct: 126 DENVEFLRQV-NISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D ++ + F+R NLY K +I R++ + EG S IIYC
Sbjct: 185 VQHDIQKNLGMIDASVFKSSFNRSNLYYEIRPKTANID---REIIKYIKSNEGKSGIIYC 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E+ D+L NGI+ PYHA + +QR F+ + V+VAT AFGMGIDKP
Sbjct: 242 LSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG C FY D K Q QE
Sbjct: 302 DVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QE 359
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
K ++ Y E CRRK LL++F + + C CDNC
Sbjct: 360 IGKQLLLETAAYAETSVCRRKVLLHYFG--------EEYLEENCGNCDNC 401
>gi|409098551|ref|ZP_11218575.1| ATP-dependent DNA helicase RecQ [Pedobacter agri PB92]
Length = 729
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 166/288 (57%), Gaps = 16/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
I FL+ I +I +A+DEAHC+S+WGHDFRP YR + ++ L + +PI+A+TATATP V
Sbjct: 129 IEFLNLI-KISFVAVDEAHCISEWGHDFRPEYRKIKQVIAGLGNNIPIIALTATATPKVQ 187
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L + + + + F+RPNL+ K+D ++ + + + S IIYC ++
Sbjct: 188 QDIMKNLGMTEATLFKSSFNRPNLFYEIRPKRDITKEIIKYIKSNPGK---SGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V + L+ NGI PYHA + K R E F+ + +V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEEVAEALNLNGISALPYHAGLEPKVRAETQDKFLMEDAEVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIH+ PK + YYQE GRAGRDG VC FY D K + D + E
Sbjct: 305 FVIHHDVPKSMEGYYQETGRAGRDGGEGVCIAFYAQKDVDK----LAKFMKDKPVSEREI 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++K V Y E CRRK +L++F G + ++ + CDNC+
Sbjct: 361 GTQILKEVIDYAESGVCRRKQILHYF-GENF----NETGCNCMCDNCK 403
>gi|148554830|ref|YP_001262412.1| ATP-dependent DNA helicase RecQ [Sphingomonas wittichii RW1]
gi|148500020|gb|ABQ68274.1| ATP-dependent DNA helicase RecQ [Sphingomonas wittichii RW1]
Length = 588
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 154/284 (54%), Gaps = 17/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
LS++P + LIAIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DDI
Sbjct: 123 LLSQVP-LALIAIDEAHCVSEWGHDFRPDYRLLRGLLDTRPDVPRLALTATADHHTRDDI 181
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L + +I GFDR NL + + D +A R+L F + G+ I+Y PT+
Sbjct: 182 LAQLGIAPDGLILAGFDRANLRYGITPR--DGVA--RQLARFIEENPGAGIVYAPTRDAT 237
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ L+ NG R YHA + R FV V+VAT AFGMGIDKPDVR V
Sbjct: 238 ERLAAQLAANGRAARAYHAGLDPAVRAANQKAFVASEDMVMVATVAFGMGIDKPDVRFVA 297
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H G PK + AYYQE GRAGRDG + F+ DF + + ++ +S + + +
Sbjct: 298 HAGLPKSIEAYYQETGRAGRDGDPAATQLFWGAEDFARARRRIETDVEESR-RPGERQRL 356
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E CRR LL HF + PP +C CDNC
Sbjct: 357 NAMAMLVEAPGCRRAILLRHF---------GEDPPAQCGNCDNC 391
>gi|288929614|ref|ZP_06423458.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329119|gb|EFC67706.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 317 str.
F0108]
Length = 725
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 96 CVSQWGHDFRPSYRCLSELRLPLP-----DVPILFLSRIPRIVLIAIDEAHCVSQWGHDF 150
+ Q HD + R ++L P D + FL I ++ A+DEAHC+S+WGHDF
Sbjct: 100 AIQQVMHDIK---RGATKLLYVAPESLGKDENVEFLQSI-KVSFYAVDEAHCISEWGHDF 155
Query: 151 RPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAAS 210
RP YR + L + P++A+TATAT V DI +L + D + F+RPNLY
Sbjct: 156 RPEYRNIRPTILRIGHAPVIALTATATDKVRSDIKKNLGICDAKEFKSSFNRPNLYYEVR 215
Query: 211 VKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQ 269
K ++ R + F Q G S IIYC ++ E++ +L N I+ PYHA +
Sbjct: 216 PKTQEVE---RNIIMFIRQHAGKSGIIYCLSRKKVEELSAILKANNIKAEPYHAGLDSAT 272
Query: 270 RKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSS 329
R + F+ + I V+VAT AFGMGIDKPDVR VIHY PK L YYQE GRAGRDG
Sbjct: 273 RSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEG 332
Query: 330 VCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSS 389
+C TFY D K + Q+ + ++ Y E CRRK LL++F G
Sbjct: 333 LCITFYSNKDLQKLEKFMES--KPVAEQDIGRQLLLETAAYAESSVCRRKMLLHYF-GED 389
Query: 390 VTVAESQVPPDKC--CDNCRH 408
T D C CDNC H
Sbjct: 390 YT-------EDNCHNCDNCLH 403
>gi|421112108|ref|ZP_15572572.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
JET]
gi|410802517|gb|EKS08671.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
JET]
Length = 621
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ +VY P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLVYQLPAVLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L+DP +I F R NL + Q++
Sbjct: 168 LRDKYKRPIPIVALTATATPKVIQDISDSLGLKDPTLIKGSFYRENLRFSVRFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKA 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D P+VR ++HY P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYSIGKTNVLVATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY AD N I N ++ T++ V++Y CR++ L ++F
Sbjct: 348 FYHPADLVTQNFIIGKENN----RKGGVTLLSFVKEYAISNGCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIESCKTCDLCSEKE 412
>gi|383113297|ref|ZP_09934070.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|382948819|gb|EFS32303.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
Length = 608
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 126 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIIALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 186 VRQLHLNHPRVFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL----ILLTKFASESNQQSINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 360 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 398
>gi|390166032|ref|ZP_10218303.1| ATP-dependent DNA helicase RecQ [Sphingobium indicum B90A]
gi|389591119|gb|EIM69096.1| ATP-dependent DNA helicase RecQ [Sphingobium indicum B90A]
Length = 590
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 148/283 (52%), Gaps = 17/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R +I L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DDI
Sbjct: 124 LLRAAKIALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADHHTRDDIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + +I GFDRPN+ A V D +A R+L++ G I+Y PT+ E
Sbjct: 184 VQLGIPRDGLIIAGFDRPNIRYA--VHPRDGLA--RQLSDLIAGQTGPGIVYAPTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ + L + G R YHA + + R F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAETLGKTGRPTRAYHAGLDPRTRAANQAAFIASEDMVMVATIAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
PK + YYQE GRAGRDG + + F+ DF + D Q+ + +
Sbjct: 300 AALPKSIEGYYQESGRAGRDGEPAEAHLFWGADDFARARQRI--GELDPLRQQGERARIT 357
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E TCRR LL HF + PP C CDNC
Sbjct: 358 ALGGLVETGTCRRAILLRHF---------GENPPTTCGNCDNC 391
>gi|456877507|gb|EMF92525.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
ST188]
Length = 621
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ +VY P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLVYQLPAVLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L+DP +I F R NL + Q++
Sbjct: 168 LRDKYKRPIPIVALTATATPKVIQDISDSLGLKDPTLIKGSFYRENLRFSVRFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D P+VR ++HY P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYSIGKTNVLVATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY AD N I N ++ T++ V++Y CR++ L ++F
Sbjct: 348 FYHPADLVTQNFIIGKENN----RKGGVTLLSFVKEYAISNGCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIESCKTCDLCSEKE 412
>gi|266624553|ref|ZP_06117488.1| ATP-dependent DNA helicase RecQ, partial [Clostridium hathewayi DSM
13479]
gi|288863582|gb|EFC95880.1| ATP-dependent DNA helicase RecQ [Clostridium hathewayi DSM 13479]
Length = 700
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 166/311 (53%), Gaps = 26/311 (8%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLM 189
+I ++A+DEAHCVSQWG DFRPSY + E L P++ A TATAT V DDI LM
Sbjct: 10 KISMVAVDEAHCVSQWGQDFRPSYLKIVEFIDRLNVRPVVSAFTATATKEVRDDISDILM 69
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVC 248
LR+P ++ TGFDRPNLY +D + NF G S +IYC T+ E+V
Sbjct: 70 LREPTVLTTGFDRPNLYFGVQAPKDKYAT----MKNFLELHPGQSGVIYCLTRKNVEEVS 125
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D L +G YHA +S +RK+ F+ D +VVAT AFGMGIDK +VR VIHY
Sbjct: 126 DKLRADGFSVTRYHAGLSDAERKKNQEDFIYDRAAIVVATNAFGMGIDKSNVRFVIHYNM 185
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQEHS 360
PK++ +YYQE GRAGRDG + C Y D N + N ++ E +QE
Sbjct: 186 PKNMESYYQEAGRAGRDGEPAECILLYGGQDVITNQLFIDNNRDNQELDAVTRAIVQERD 245
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC-RHNEMLELEQV 417
+ ++R+ Y C R Y+L +F + + C C NC E +++ +
Sbjct: 246 RERLRRMTFYCFTNECLRDYILRYF---------GEYGENYCGNCSNCLSQFETVDVTDI 296
Query: 418 PRGGRMVVENS 428
+G VE+S
Sbjct: 297 AKGIIGCVESS 307
>gi|428178543|gb|EKX47418.1| cpRecQ plastid-targeted DNA helicase [Guillardia theta CCMP2712]
Length = 673
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 170/296 (57%), Gaps = 21/296 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHCVS+WGHDFRP Y+ L ELR +PDVP++A+TATATP V D+I +L L
Sbjct: 150 IELIAIDEAHCVSEWGHDFRPEYQRLYELREEVPDVPVMALTATATPRVQDEIIRNLSLG 209
Query: 192 D-----PNI---INTGFDRPNLYLAASVKQD-DIMADLRKLTNFENQFEG-STIIYCPTK 241
P+ + T FDR NL+ +A + + ++ R++ + Q I+Y T+
Sbjct: 210 SFRSDQPSGLVRVVTTFDRLNLFYSAYERNSQEAISVFREIIDGSKQGNPVPAIVYALTQ 269
Query: 242 VICEKVCDVLSRNGIQNRP---YHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
EKV D L GI YHA ++ +R +IH LF+KD + VVVAT AFGMGIDKP
Sbjct: 270 KDAEKVADKLVSLGIAQDSVAFYHAGMTDSKRTKIHDLFLKDKLHVVVATTAFGMGIDKP 329
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
D+R VIH+GAPK + +YYQ+ GRAGRDG S C Y DF + + + I E
Sbjct: 330 DIRHVIHWGAPKTIESYYQQSGRAGRDGEPSRCTLLYSGQDFMLASFYEKSGSSGELISE 389
Query: 359 HSKTMM----KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
++ + ++ +Y L +CRR LL HF G ++ S CDNC E
Sbjct: 390 IARDALHQGISQMRQYCYLTSCRRIALLKHF-GEKLSGNASSCGQ---CDNCLRKE 441
>gi|336452159|ref|ZP_08622591.1| ATP-dependent DNA helicase RecQ [Idiomarina sp. A28L]
gi|336280975|gb|EGN74260.1| ATP-dependent DNA helicase RecQ [Idiomarina sp. A28L]
Length = 623
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 157/285 (55%), Gaps = 32/285 (11%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ LIA+DEAHC+SQWGHDFRP Y L E+R LP P+LA+TATA V DI L L
Sbjct: 156 QVSLIAVDEAHCISQWGHDFRPEYGQLGEVREQLPGAPVLALTATADAVTRQDIIERLHL 215
Query: 191 RDPNIINTGFDRPNL-YLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
D ++ FDRPN+ YL Q+ + L + Q S IIYC ++ E++ +
Sbjct: 216 DDSALVQGSFDRPNIRYLV----QEKYKPRTQVLKYVKRQRGASGIIYCGSRKRTEELAE 271
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L R GI+ Y+A + QR F++D I V+VAT AFGMGI+KP+VR V+HY P
Sbjct: 272 MLMREGIRAAAYNAGLPHDQRAAALQGFIRDDIDVIVATVAFGMGINKPNVRFVMHYDLP 331
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ + AYYQE GRAGRDG ++ Y+ +D I ++EH +T RVEK
Sbjct: 332 RSVEAYYQETGRAGRDGAAAEAVMLYEPSDAAWVWKI---------LEEHDETPQLRVEK 382
Query: 370 --------YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F DK C NC
Sbjct: 383 QKFSAMTSFAEAQTCRRVVLLNYFNEYR----------DKACGNC 417
>gi|418754491|ref|ZP_13310717.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
MOR084]
gi|409965211|gb|EKO33082.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
MOR084]
Length = 621
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ +VY P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLVYQLPAVLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L+DP +I F R NL + Q++
Sbjct: 168 LRDKYKRPIPIVALTATATPKVIQDISDSLGLKDPTLIKGSFYRKNLRFSVRFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D P+VR ++HY P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYSIGKTNVLVATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY AD N I N ++ T++ V++Y CR++ L ++F
Sbjct: 348 FYHPADLVTQNFIIGKENN----RKGGVTLLSFVKEYAISNGCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIESCKTCDLCSEKE 412
>gi|357043893|ref|ZP_09105579.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
gi|355367947|gb|EHG15373.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
Length = 727
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 159/291 (54%), Gaps = 23/291 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI
Sbjct: 131 FLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRHAIETIGLAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K++D + +++ F Q G S IIYC ++
Sbjct: 190 IRSLGIEDCAEFKSSFNRPNLYYEVRPKKNDDDTN-KQIIKFIKQHAGKSGIIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ PYHA + + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 249 VEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEEIDVIVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSK 361
IHY PK L YYQE GRAGRDG +C FY D K M +P Q+ +
Sbjct: 309 IHYDIPKSLEGYYQETGRAGRDGEEGICVVFYSKNDLKKLEKFMEGKPVAE----QDIGR 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC----CDNCRH 408
+++ E Y E CRRK LL++F G KC CDNC H
Sbjct: 365 QLLQETEAYAESSVCRRKMLLHYF-GEEYA---------KCNCGMCDNCLH 405
>gi|160886583|ref|ZP_02067586.1| hypothetical protein BACOVA_04594 [Bacteroides ovatus ATCC 8483]
gi|423289735|ref|ZP_17268585.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|156108468|gb|EDO10213.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
gi|392667446|gb|EIY60956.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 608
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 126 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 186 VRQLHLNHPRIFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRN 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL----ILLTKFASESNQQSINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 360 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 398
>gi|410450850|ref|ZP_11304880.1| ATP-dependent DNA helicase, RecQ family [Leptospira sp. Fiocruz
LV3954]
gi|410015393|gb|EKO77495.1| ATP-dependent DNA helicase, RecQ family [Leptospira sp. Fiocruz
LV3954]
Length = 621
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ +VY P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLVYQLPAVLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L+DP +I F R NL + Q++
Sbjct: 168 LRDKYKRPIPIVALTATATPKVIQDISDSLGLKDPTLIKGSFYRENLRFSVRFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D P+VR ++HY P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYSIGKTNVLVATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY AD N I N ++ T++ V++Y CR++ L ++F
Sbjct: 348 FYHPADLVTQNFIIGKENN----RKGGVTLLSFVKEYAISNGCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIESCKTCDLCSEKE 412
>gi|293373225|ref|ZP_06619587.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|292631873|gb|EFF50489.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
Length = 550
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 131 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 191 VRQLHLNHPRIFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRN 248
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 249 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 308
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 309 VIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL----ILLTKFASESNQQNINLE 364
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 365 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 403
>gi|418745839|ref|ZP_13302174.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
CBC379]
gi|410793223|gb|EKR91143.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
CBC379]
Length = 621
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ +VY P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLVYQLPAVLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L+DP +I F R NL + Q++
Sbjct: 168 LRDKYKRPIPIVALTATATPKVIQDISDSLGLKDPTLIKGSFYRENLRFSVRFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D P+VR ++HY P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYSIGKTNVLVATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY AD N I N ++ T++ V++Y CR++ L ++F
Sbjct: 348 FYHPADLVTQNFIIGKENN----RKGGVTLLSFVKEYAISNGCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIESCKTCDLCSEKE 412
>gi|386812206|ref|ZP_10099431.1| DNA helicase RecQ [planctomycete KSU-1]
gi|386404476|dbj|GAB62312.1| DNA helicase RecQ [planctomycete KSU-1]
Length = 714
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 163/292 (55%), Gaps = 15/292 (5%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL +P+ + FL + +I L AIDE+HC+S+WGHDFRP YR L L+ P VP++A+TA
Sbjct: 113 RLFMPEF-LQFLQGL-KISLFAIDESHCISEWGHDFRPEYRQLEILKEKFPKVPVMALTA 170
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TATP V DI L L D I F+R NLY K + L L +++ + S
Sbjct: 171 TATPAVQKDIILQLKLSDCRIFKASFNRKNLYYQIKPKDNPYHQILHYL---KSRKKDSG 227
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
IIYC ++ E + L G + PYHA + + R E F+ D ++++VAT AFGMG
Sbjct: 228 IIYCQSRKTVESLTTSLQAEGYRVLPYHAGLPAEVRTENQERFIHDDVEIIVATIAFGMG 287
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
IDKPDVR VIHY PK + YYQE GRAGRDGL S C + AD K ++++
Sbjct: 288 IDKPDVRYVIHYDLPKSIEGYYQETGRAGRDGLKSDCILLFSYADKFKIEYFIHQKIDEN 347
Query: 355 EIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E + + ++ + Y E CRRK LL++F E P+ C+NC
Sbjct: 348 E-KLIAYKQLRHLTNYCEGNICRRKLLLDYF-------GEKFDEPN--CNNC 389
>gi|399024201|ref|ZP_10726247.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
gi|398081075|gb|EJL71860.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
Length = 734
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/263 (42%), Positives = 152/263 (57%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + I AIDEAHC+S+WGHDFRP YR L + + +VP++A+TATATP V DDI
Sbjct: 132 FLKEVT-ISFFAIDEAHCISEWGHDFRPEYRNLKLIIDKIANVPVIALTATATPKVQDDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + + + F+RPNLY K + D +++ F NQ +G S I+YC ++
Sbjct: 191 QKTLGMANALVFKESFNRPNLYYEVRPK---VNVD-KEIVKFINQHKGKSGIVYCLSRRK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ +L NGI PYHA + K R F+ + + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKT 362
IHY PK L +YYQE GRAGRDG C FY D K + Q +++ EI
Sbjct: 307 IHYDFPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI---GLQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++ V Y E RR+Y+L +F
Sbjct: 364 LLNEVVGYAETSMSRRQYILYYF 386
>gi|153809531|ref|ZP_01962199.1| hypothetical protein BACCAC_03849 [Bacteroides caccae ATCC 43185]
gi|423219543|ref|ZP_17206039.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149127839|gb|EDM19062.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392624748|gb|EIY18826.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 601
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 161/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGMLHQQFPQVPIVALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K + F N+ G S IIYC ++
Sbjct: 180 VRQLHLVHPRTFISSFDRPNISL--TVKRGFQAKEKNKAILEFINRHSGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S ++R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKQGIRCGVYHAGLSAQKRDETQDDFINDRIQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFATESNQQSINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETATEDCGNCDVCKN 392
>gi|390945503|ref|YP_006409263.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
gi|390422072|gb|AFL76578.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
Length = 730
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 161/290 (55%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL +I ++ AIDEAHC+S+WGHDFRP YR + + + P++A+TATATP V
Sbjct: 131 VAFLHKI-KVSFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPAPLIALTATATPKVQL 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + D ++ + F+RPNLY K + D R + F Q EG S IIYC ++
Sbjct: 190 DIQKNLGMSDASVFKSSFNRPNLYYEIRPKHN---VD-RDIIRFIKQNEGKSGIIYCLSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ ++L NGI+ YHA + R F+ + V+VAT AFGMGIDKPDVR
Sbjct: 246 KKVEELTELLVANGIKALAYHAGMDAATRAANQDHFLMERADVIVATIAFGMGIDKPDVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHS 360
VIHY PK L YYQE GRAGRDG C TFY D K Q + + EI
Sbjct: 306 YVIHYDIPKSLEGYYQETGRAGRDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEI---G 362
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
K ++ Y E CRRK LL++F G T + C CDNCR+
Sbjct: 363 KLLLLETVSYAESSMCRRKTLLHYF-GEEYT-------EENCGNCDNCRN 404
>gi|392969325|ref|ZP_10334740.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387841519|emb|CCH56798.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 736
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 160/287 (55%), Gaps = 23/287 (8%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + I +AIDEAHC+S+WGHDFRP YR + + + ++P++A+TATATP V DI
Sbjct: 133 FLKK-ANISFVAIDEAHCISEWGHDFRPEYRKIRGIVDNIGNLPVIALTATATPKVQQDI 191
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D N+ + F+R NLY K D ++L + Q +G S I+YC ++
Sbjct: 192 QKNLQMEDANLYKSSFNRKNLYYEIKPKIDA----KKQLIKYVKQNKGKSGIVYCLSRKT 247
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + ++L+ N I+ PYHA + R F+ + + V+VAT AFGMGIDKPDVR V
Sbjct: 248 VEDIAELLNVNDIKALPYHAGLDPLTRMNNQDAFLNEEVDVIVATIAFGMGIDKPDVRFV 307
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE--HSK 361
IHY APK L YYQE GRAGRDGL C FY D K + D + E ++K
Sbjct: 308 IHYDAPKSLEGYYQETGRAGRDGLEGNCVMFYSYDDIVK----LEKFNKDKPVTERDNAK 363
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ + Y L CRR+ LL++F + C CDNC
Sbjct: 364 HLLTEMVSYANLGVCRRRQLLSYF---------GEFLDKDCGFCDNC 401
>gi|328948910|ref|YP_004366247.1| RecQ familyATP-dependent DNA helicase [Treponema succinifaciens DSM
2489]
gi|328449234|gb|AEB14950.1| ATP-dependent DNA helicase, RecQ family [Treponema succinifaciens
DSM 2489]
Length = 520
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 152/272 (55%), Gaps = 7/272 (2%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
IAIDEAHC+S+WGHDFRP Y ++ +R P LA+TATAT V DI +L + +P
Sbjct: 142 IAIDEAHCISEWGHDFRPDYMEITHIRNQFPKSVFLALTATATKQVQADIIKNLRMENPE 201
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I F+RPN++L K I L + N NQ S IIYC ++ + V L N
Sbjct: 202 IFMASFNRPNIFLQVIKKDKPIEQVLNFIENHPNQ---SGIIYCFSRKQVDLVAQELHIN 258
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
I+ YHA ++ QR + F+ D ++VAT AFGMGI+KPDVR VIH+ PK +
Sbjct: 259 RIKALSYHAGLNDAQRTKNQQDFISDKADIMVATVAFGMGINKPDVRFVIHFDMPKSIEQ 318
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQEIGRAGRDGL S Y D K F+ N + ++ S+ +++ + Y E
Sbjct: 319 YYQEIGRAGRDGLESEALLLYSAGDIHKIRYFFKDNFDSAK----SENLLQGMINYCENS 374
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
CRRK LL++F S + V + CCD C
Sbjct: 375 VCRRKSLLSYFGESYSDARQDCVSSENCCDIC 406
>gi|237723404|ref|ZP_04553885.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|229447926|gb|EEO53717.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
Length = 608
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 126 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 186 VRQLHLNHPRIFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRN 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL----ILLTKFASESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 360 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 398
>gi|332882051|ref|ZP_08449686.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357048209|ref|ZP_09109763.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332679975|gb|EGJ52937.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355528792|gb|EHG98270.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 608
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 158/293 (53%), Gaps = 19/293 (6%)
Query: 114 LRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVT 173
L L LP +L R ++ L A+DEAHC+SQWGHDFRP Y L LR PDVPI+A+T
Sbjct: 114 LMLELP-----YLIRDMKVSLFAVDEAHCISQWGHDFRPEYAQLGLLRQTFPDVPIVALT 168
Query: 174 ATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS 233
ATA + +DI L L DP + + FDRPNL L D L +
Sbjct: 169 ATADRLTREDIQKQLALSDPVVFISSFDRPNLSLDVKRGYQKKDKDRAILELIARHPDDC 228
Query: 234 TIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGM 293
IIYC +K E V ++L + I YHA + ++R+ F+ D ++VV AT AFGM
Sbjct: 229 GIIYCLSKKTTESVAEMLRGHDIAAVAYHAGLPTEERERAQDDFIHDRVQVVCATVAFGM 288
Query: 294 GIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND 353
GIDK +VR VIHY PK + +YQEIGRAGRDGL + FY D + + Q +
Sbjct: 289 GIDKSNVRFVIHYNLPKSIEGFYQEIGRAGRDGLPAETVLFYSLGDLVQLSKFAQ----E 344
Query: 354 SEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
S +E + ++R+++Y E CRR+ LLN+F + D C NC
Sbjct: 345 SGQREINMEKLRRMQEYAESDVCRRRILLNYFGEHT----------DGDCGNC 387
>gi|156361159|ref|XP_001625387.1| predicted protein [Nematostella vectensis]
gi|156212218|gb|EDO33287.1| predicted protein [Nematostella vectensis]
Length = 181
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 167 VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF 226
VPI+A+TATATP V DIC SL L+ P+++ TGFDRPNLY K D +M DLR L
Sbjct: 1 VPIVALTATATPDVRRDICLSLKLKTPSVVCTGFDRPNLYFEVHKKGDSVMEDLRPLLIS 60
Query: 227 E---NQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIK 283
+ F G TIIYCPTK E + D L NGI YHA ++LK+RK H F++D I+
Sbjct: 61 DINKFSFAGPTIIYCPTKKTTEMIADALKANGILCEAYHAGMALKKRKSAHHKFIRDEIQ 120
Query: 284 VVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKN 343
VVAT AFGMGIDKPDVR +IHYGAPKD+ +Y QEIGRAGRDG S CY FYK DF +
Sbjct: 121 CVVATVAFGMGIDKPDVRQIIHYGAPKDIESYSQEIGRAGRDGEPSSCYVFYKPGDFATS 180
>gi|270293488|ref|ZP_06199690.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270274955|gb|EFA20815.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 603
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/263 (43%), Positives = 156/263 (59%), Gaps = 8/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDIHISLFAIDEAHCISQWGHDFRPEYTQMGILHQLFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IKQLHLNQPRIFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI++ YHA +S +R E F+ D ++ V AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKHGIRSAVYHAGLSPARRDEAQDDFINDRVQAVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY AD ++ DS Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL----ILLTKFATDSGQQSINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++R+++Y E CRR+ LL++F
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF 376
>gi|422005787|ref|ZP_16352953.1| DNA helicase [Leptospira santarosai serovar Shermani str. LT 821]
gi|417255536|gb|EKT85007.1| DNA helicase [Leptospira santarosai serovar Shermani str. LT 821]
Length = 621
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ +VY P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLVYQLPAVLEGSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLSR-----------IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS +P++ L IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RAATGKIRILYLSPEKALSRQVFEILPKLPLDRIAVDEAHCVSQWGHDFRPEYRKLHE 167
Query: 160 LRLPLPD-VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L+DP +I F R NL + Q++
Sbjct: 168 LRDKYKRPIPIVALTATATPKVIQDISDSLGLKDPTLIKGSFYRENLRFSVRFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTENGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D P+VR ++HY P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYSIGKTNVLVATNAFGMGLDNPNVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCVL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY AD N I N ++ T++ +++Y CR++ L ++F
Sbjct: 348 FYHPADLVTQNFIIGKENN----RKGGVTLLSFIKEYAISNGCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIESCKTCDLCSEKE 412
>gi|456985305|gb|EMG21152.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 550
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 138
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|417775238|ref|ZP_12423094.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. 2002000621]
gi|410574933|gb|EKQ37959.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. 2002000621]
Length = 624
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|393788520|ref|ZP_10376647.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
gi|392654200|gb|EIY47848.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
Length = 601
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 155/286 (54%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + DI
Sbjct: 120 YLLRDMNLSLFAIDEAHCISQWGHDFRPEYAQMGILHQMFPKVPIIALTATADKITRGDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L L DP I + FDRPNL L L + + S IIYC ++
Sbjct: 180 IRQLHLTDPKIFISSFDRPNLSLTVKRGYQQKEKSKAILEFIDRHADESGIIYCMSRSKT 239
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E V +L ++GI+ YHA +S QR F+ D I+VV AT AFGMGIDK +VR VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSAYQRDNTQDDFINDRIQVVCATIAFGMGIDKSNVRWVI 299
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK + ++YQEIGRAGRDG+ S FY D ++ +S+ Q + +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMPSDTVLFYSLGDL----ILLTKFATESKQQTINLEKL 355
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+R+++Y E CRR+ LL++F S + C CD CR+
Sbjct: 356 QRMQQYAEADICRRRILLSYFGEKS---------EEDCGNCDVCRN 392
>gi|188995415|ref|YP_001929667.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis ATCC
33277]
gi|188595095|dbj|BAG34070.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis ATCC
33277]
Length = 725
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 156/287 (54%), Gaps = 17/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL I I AIDEAHC+S+WGHDFRP YR + + + I+A+TATATP V
Sbjct: 127 IAFLREID-ISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPRSIIALTATATPKVQH 185
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L L D ++ + F+RPNL+ K D+ D+ K +Q S I+YC ++
Sbjct: 186 DIQKNLGLMDADVFKSSFNRPNLFYHIRPKTQDVDRDVVKY--ILSQPGKSGIVYCMSRN 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
VL NGI+ PYHA + +R F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 244 KVTTFAQVLQANGIKALPYHAGLDAGERASNQDAFLNEEISVIVATIAFGMGIDKPDVRY 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C FY+ D + Q +++ EI +
Sbjct: 304 VIHYDMPKSLEGYYQETGRAGRDGGEGECIAFYRPKDLQRLEKFMQGKPISEQEI---GR 360
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ + E R CRRK LL++F G T + C CDNC
Sbjct: 361 QLLAETAAFAESRVCRRKLLLHYF-GEDYT-------QENCGACDNC 399
>gi|443244229|ref|YP_007377454.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442801628|gb|AGC77433.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 730
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 155/260 (59%), Gaps = 13/260 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVIDDICTSL 188
+I +A+DEAHC+S+WGHDFRP YR L ++ R+ D+PI+ +TATATP V +DI +L
Sbjct: 137 KISFLAVDEAHCISEWGHDFRPEYRNLRKIIDRIG-SDIPIIGLTATATPKVQEDILKNL 195
Query: 189 MLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKV 247
+ D F+RPNL+ K ++ AD+ T F Q EG S I+YC ++ E++
Sbjct: 196 QITDATTFQASFNRPNLFYEVRPKTANVDADI---TRFIKQNEGKSGIVYCLSRKRVEEL 252
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
VL NGI+ PYHA + K R + +F+ + VVVAT AFGMGIDKPDVR VIH+
Sbjct: 253 AQVLQVNGIKAVPYHAGLDAKTRVKHQDMFLMEDTDVVVATIAFGMGIDKPDVRFVIHHD 312
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEHSKTMMK 365
PK + +YYQE GRAGRDG C +Y D K + ++ I QE +++
Sbjct: 313 IPKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEK----LEKFMSGKPIAEQEIGHALLQ 368
Query: 366 RVEKYLELRTCRRKYLLNHF 385
+ Y E RR+Y+L++F
Sbjct: 369 EMVGYSETSMSRRQYILHYF 388
>gi|456826055|gb|EMF74425.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Canicola str. LT1962]
Length = 624
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|323141075|ref|ZP_08075980.1| ATP-dependent DNA helicase, RecQ family [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414451|gb|EFY05265.1| ATP-dependent DNA helicase, RecQ family [Phascolarctobacterium
succinatutens YIT 12067]
Length = 416
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 155/287 (54%), Gaps = 13/287 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV-TATATPVVIDDI 184
+R I ++A+DEAHCVSQWGH FR Y + + LP P++A TATATP V DI
Sbjct: 131 FARQAYITMVAVDEAHCVSQWGHSFRKEYYNIPDFIQALPTKPLVAAFTATATPDVRRDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVI 243
L + + I+ TGFDRPNL+ A QD R L F + + ++YC T+
Sbjct: 191 IKRLGIPEAKIVVTGFDRPNLHFAVQRTQDK----ERSLLEFMRKHKKDCGVVYCATRNK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E V +L R G YHA ++ ++R+E FV + ++VAT AFGMGIDKPDVR V
Sbjct: 247 VESVTQLLRRQGFSALRYHAGLTPEERRENQNAFVGGSVPLIVATNAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
+HY PKD+ +YYQE GRAGRDGL + C Y AD N + + D +EH +
Sbjct: 307 VHYNMPKDIESYYQEAGRAGRDGLPAECLLLYDKADIAVNTYLIGHDQPDLTWKEHELQL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+ ++ Y C RK LL +F + + + C NC N+
Sbjct: 367 LSKMTNYCNTSMCLRKVLLEYFGEKTTSQCNN-------CGNCDVNK 406
>gi|374597031|ref|ZP_09670035.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
gi|373871670|gb|EHQ03668.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
Length = 732
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 152/262 (58%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR L + + D +PI+ +TATATP V +DI
Sbjct: 134 RSVKISFMAVDEAHCISEWGHDFRPEYRNLRTIIKRIGDNIPIIGLTATATPKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + D F+RPNLY K ++ AD+ + F Q EG S IIYC ++ E
Sbjct: 194 NLGIPDAKTFKASFNRPNLYYEIRPKTKNVDADIIR---FVKQNEGKSGIIYCLSRKRVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L NGI+ PYHA + K R +F+ + VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQTLQVNGIKAVPYHAGLDPKTRIRHQDMFIMEDTDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK L +YYQE GRAGRDG C FY D K M +P QE + +
Sbjct: 311 HDIPKSLESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAE----QEIGQAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ V Y E RR++LL++F
Sbjct: 367 LQEVVGYAETSMSRRQFLLHYF 388
>gi|85858064|ref|YP_460266.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
gi|85721155|gb|ABC76098.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
Length = 619
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 160/284 (56%), Gaps = 21/284 (7%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+ IP I L AIDEAHC+SQWGHDFRP YR L LR P++P++A+TATA DI
Sbjct: 127 LNDIP-IALFAIDEAHCISQWGHDFRPEYRQLGRLRGLFPEIPLIALTATAEAHTRRDIL 185
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVIC 244
L LR +GFDRPN+ K+ +LT F + +++G+ I+YC ++
Sbjct: 186 ERLGLRQARSYISGFDRPNIRYTVLEKRKPFA----QLTTFLQPRYKGTGIVYCLSRQRV 241
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
EKV L+ G Q PYHA + RK++ F++D I+++VAT AFGMGIDK ++R V+
Sbjct: 242 EKVAGALTEAGFQAAPYHAGLPAGARKQVQEDFLRDDIRIIVATVAFGMGIDKSNIRWVV 301
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS--EIQEHSKT 362
HY PK++ +YYQE GRAGRDGL + + D + + + + N I+ H
Sbjct: 302 HYDIPKNIESYYQETGRAGRDGLPAEALLLFGYGDISLARGLIENSKNPERRRIELHKLN 361
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M Y E +CRR+ LL +F S +AE C NC
Sbjct: 362 AMV---GYAEALSCRRRILLGYFGES---LAED-------CGNC 392
>gi|395218411|ref|ZP_10402063.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394454486|gb|EJF09132.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 624
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 158/286 (55%), Gaps = 17/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL R+ ++ L A+DEAHC+S WGHDFRP Y L L+ P VP++A+TATA + DI
Sbjct: 129 FLKRL-QVSLFAVDEAHCISAWGHDFRPEYTQLRALKQQFPAVPVVALTATADKLTQKDI 187
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVI 243
L LR P + FDRPN+ L Q+ K+T+F ++ G IIYC ++
Sbjct: 188 QEQLQLRQPEVFVASFDRPNINLMVLPGQNR----FNKITDFLSRRHGQPGIIYCLSRKA 243
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + L NG YHA +S +QR + F++D + +V AT AFGMGIDK +VR V
Sbjct: 244 TESLAGKLRENGYNATFYHAGMSAQQRSKAQESFLRDDVLIVCATIAFGMGIDKSNVRWV 303
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK++ YYQEIGRAGRDG S FY AD N+ + ND E
Sbjct: 304 IHYNLPKNVEGYYQEIGRAGRDGAKSDALLFYSFADVM--NLRTMLSDNDKSQNELQLVK 361
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD-KCCDNCRH 408
++R++++ E CRR+ LL +F Q+ D CD CR+
Sbjct: 362 LERMQQFAEATFCRRRILLQYFG--------EQMSRDCGNCDICRN 399
>gi|332534725|ref|ZP_08410553.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035812|gb|EGI72296.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
Length = 596
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 122 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L ++Q S IIYC ++
Sbjct: 182 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQ---SGIIYCTSRK 238
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L+ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 239 RVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 298
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + +YYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 299 VLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 357
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 358 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 394
>gi|418669215|ref|ZP_13230605.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|421085029|ref|ZP_15545884.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
HAI1594]
gi|421102091|ref|ZP_15562701.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421123463|ref|ZP_15583743.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. Brem 329]
gi|410343514|gb|EKO94745.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. Brem 329]
gi|410368236|gb|EKP23614.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432422|gb|EKP76778.1| ATP-dependent DNA helicase, RecQ family [Leptospira santarosai str.
HAI1594]
gi|410755050|gb|EKR16689.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
Length = 624
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|417765675|ref|ZP_12413632.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400352034|gb|EJP04241.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Bulgarica str. Mallika]
Length = 624
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|332664724|ref|YP_004447512.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332333538|gb|AEE50639.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 732
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 182/374 (48%), Gaps = 62/374 (16%)
Query: 40 HFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTN--NTSFLSRIPRIVLIAIDEAHCV 97
HF SS+T A+ ++ D +++Y+ PE +T N F R + +A+DEAHC+
Sbjct: 91 HFLNSSLTKAQMKLVKQAINDGNTKLLYIAPETLTKDENIEFF-RTVNVSFVAVDEAHCI 149
Query: 98 SQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCL 157
S+WGHDFRP YR + R +L I +
Sbjct: 150 SEWGHDFRPEYRRI-------------------RSMLDGIGQ------------------ 172
Query: 158 SELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIM 217
+VPI+A+TATATP V DI +L LR + + F+R NLY K
Sbjct: 173 --------EVPIIALTATATPKVQSDILKNLGLRSEHAFMSSFNRENLYYEVRPKGKPEQ 224
Query: 218 ADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGL 276
A +R++ G S IIY ++ E++ VL N I+ PYHA + K R
Sbjct: 225 A-VRQIIQVIKGMPGQSGIIYVQSRKAAEEIAKVLQVNDIKAAPYHAGLDAKTRTRTQDE 283
Query: 277 FVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYK 336
F+ + + V+VAT AFGMGIDKPDVR VIH+ PK + YYQE GRAGRDGL C FY
Sbjct: 284 FLMEDVDVIVATIAFGMGIDKPDVRFVIHFDMPKSIENYYQETGRAGRDGLEGRCIAFYA 343
Query: 337 TADFTKNNMIFQPNLNDSEI--QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAE 394
D K + L D + +E +M+ V Y E CRR++LL++F G A
Sbjct: 344 YKDMLK----LEKFLRDKPVAEREMGSQLMQEVMAYAETTACRRQFLLHYF-GEEYDQAN 398
Query: 395 SQVPPDKCCDNCRH 408
+ CDNCR+
Sbjct: 399 CTL-----CDNCRY 407
>gi|332300231|ref|YP_004442152.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica DSM
20707]
gi|332177294|gb|AEE12984.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica DSM
20707]
Length = 733
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 154/286 (53%), Gaps = 18/286 (6%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATATP V DI +
Sbjct: 131 RQVKISFFAIDEAHCISEWGHDFRPEYRKIRPVVDEIGRRPIIALTATATPKVEHDIRKN 190
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + D I + F+RPNLY + K +D+ A R + + S IIYC ++ +
Sbjct: 191 LGILDGRIFKSSFNRPNLYYSVEKKGEDVNA--RIIRFIRKRPNKSGIIYCMSREKVMNL 248
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L NGI+ PYHA + K+R F+ + +V+VAT AFGMGIDKPDVR VIHY
Sbjct: 249 SKLLQMNGIKALPYHAGLDAKERSANQDAFLSEECRVIVATIAFGMGIDKPDVRYVIHYD 308
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMK 365
PK L YYQE GRAGRDG C FY D K N M +P QE + ++
Sbjct: 309 MPKSLEGYYQETGRAGRDGGEGYCLAFYNEKDIQKLENFMQGKPIAE----QEIGRQLLA 364
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHN 409
+ + CRR YLL +F + + C CDNC N
Sbjct: 365 KTSTFALTPMCRRAYLLYYFG--------ERYDQENCGACDNCAKN 402
>gi|427733629|ref|YP_007053173.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
gi|427368670|gb|AFY52626.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
Length = 719
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 159/277 (57%), Gaps = 8/277 (2%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LPL D+ + I AIDEAHCVS+WGHDFRP YR + LR P+VP
Sbjct: 119 RLLSERFLPLLDL----VHHQIGISAFAIDEAHCVSEWGHDFRPEYRQMISLRQRYPNVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
I A+TATAT V DI L L+ PN+ F+R NLY K+ + +L L +N
Sbjct: 175 IWALTATATERVRLDIIKQLGLKQPNVHIASFNRQNLYYEVRPKKKNSYVELLGLIQ-DN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ E++ L + I PYHA +S +R E F++D +++VAT
Sbjct: 234 --EGSGIIYCLTRKKVEELAFKLQHDKISALPYHAGLSDVERSENQTKFIRDDARIIVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+HY ++L +YYQE GRAGRDG SS C F +D +
Sbjct: 292 IAFGMGINKPDVRFVVHYDISRNLESYYQESGRAGRDGESSRCMLFLSYSDVKTIEWLID 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
N+ E Q +K ++++ Y E CRR L++F
Sbjct: 352 QKSNEQE-QMIAKHQLRQMIDYAEGTDCRRAIQLSYF 387
>gi|418690087|ref|ZP_13251205.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. FPW2026]
gi|400360810|gb|EJP16780.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. FPW2026]
Length = 624
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|455789814|gb|EMF41721.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 624
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|418726031|ref|ZP_13284643.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. UI 12621]
gi|409960812|gb|EKO24565.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. UI 12621]
Length = 624
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|24213325|ref|NP_710806.1| ATP-dependent DNA helicase RecQ [Leptospira interrogans serovar Lai
str. 56601]
gi|45658788|ref|YP_002874.1| ATP-dependent DNA helicase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386072985|ref|YP_005987302.1| ATP-dependent DNA helicase RecQ [Leptospira interrogans serovar Lai
str. IPAV]
gi|417786130|ref|ZP_12433826.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. C10069]
gi|24194069|gb|AAN47824.1| ATP-dependent DNA helicase RecQ [Leptospira interrogans serovar Lai
str. 56601]
gi|45602032|gb|AAS71511.1| ATP-dependent DNA helicase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353456774|gb|AER01319.1| ATP-dependent DNA helicase RecQ [Leptospira interrogans serovar Lai
str. IPAV]
gi|409950675|gb|EKO05198.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. C10069]
Length = 631
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 138
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|417761986|ref|ZP_12409982.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. 2002000624]
gi|418670944|ref|ZP_13232304.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. 2002000623]
gi|409942175|gb|EKN87796.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. 2002000624]
gi|410582060|gb|EKQ49861.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. 2002000623]
Length = 631
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 138
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSIANKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|340346831|ref|ZP_08669950.1| ATP-dependent helicase RecQ [Prevotella dentalis DSM 3688]
gi|433652062|ref|YP_007278441.1| ATP-dependent DNA helicase RecQ [Prevotella dentalis DSM 3688]
gi|339611048|gb|EGQ15888.1| ATP-dependent helicase RecQ [Prevotella dentalis DSM 3688]
gi|433302595|gb|AGB28411.1| ATP-dependent DNA helicase RecQ [Prevotella dentalis DSM 3688]
Length = 742
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 160/286 (55%), Gaps = 18/286 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLP----LPDVPILAVTATATPVVIDDI 184
+I AIDEAHC+S+WGHDFRP YR + R+ + VP++A+TATAT V DI
Sbjct: 136 KISFYAIDEAHCISEWGHDFRPEYRNIRPTIDRIACEQHVDKVPVIALTATATDKVRTDI 195
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K + D ++ F Q EG S I+YC ++
Sbjct: 196 KKSLGIMDAPDFKSSFNRPNLYYEVRPKVSEEDTD-SQIIRFLRQHEGKSGIVYCLSRKK 254
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ L NG + PYHA + + R + F+K+ + V+VAT AFGMGIDKPDVR V
Sbjct: 255 VEELSKKLQLNGFKAAPYHAGLDTELRTKTQDDFLKEELDVIVATIAFGMGIDKPDVRFV 314
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRD +C FY D K F N ++E +E + +
Sbjct: 315 IHYDIPKSLEGYYQETGRAGRDDGEGICIAFYSPKDLKKLEK-FMENKGEAE-KEIGRQL 372
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD-KCCDNCRH 408
++ + Y E CRR++LL++F E PD CDNC+H
Sbjct: 373 LEETKAYAETSVCRRRFLLHYF-------GEEYPKPDCGNCDNCKH 411
>gi|427388684|ref|ZP_18884382.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425724657|gb|EKU87532.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 611
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + + P++PI+A+TATA + DI
Sbjct: 129 YLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMGFMHEMFPNIPIIALTATADKITRVDI 188
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 189 VRQLHLNQPKIFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIARHPGESGIIYCMSRS 246
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + G++ YHA +S QR E F+ D +++V AT AFGMGIDK +VR
Sbjct: 247 KTETVAQMLQKQGLRVAVYHAGLSSAQRDEAQNDFINDRVQIVCATIAFGMGIDKSNVRW 306
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 307 VIHYNLPKSIESFYQEIGRAGRDGLPSDTMLFYSLADL----ILLTKFATESGQQGINLE 362
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F ES CD C++
Sbjct: 363 KLQRMQQYAEADVCRRRILLSYF-------GESTTEDCGNCDVCKN 401
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 163/295 (55%), Gaps = 11/295 (3%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP Y+ L LR+ P+VP +A+TATATP V DI L ++ P
Sbjct: 611 IDEAHCVSQWGHDFRPDYKKLQVLRVKYPNVPTMALTATATPRVRTDILHQLGMQSPKWF 670
Query: 197 NTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCDVLSRNG 255
+ F+RPNL + K+ +D + + +F+ I+YC ++ C+ + + NG
Sbjct: 671 MSSFNRPNLRYSVISKKGKNASD-EVIGLIKAKFKDDCGIVYCLSRNDCDTYAEQMKING 729
Query: 256 IQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAY 315
I+ YHA +S KQR +I G ++ + IKVV AT AFGMGIDKP+VR VIH PK + Y
Sbjct: 730 IKAMGYHAGLSDKQRSDIQGRWISEQIKVVCATIAFGMGIDKPNVRFVIHASLPKSIEGY 789
Query: 316 YQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNL--NDSEIQEHSKTMMKRVEKYLEL 373
YQE GRAGRD ++ C FY AD ++ + + ++ N + + H + K V
Sbjct: 790 YQESGRAGRDSENAECILFYNYADMYRHRKMIEMDVASNKTAQKTHMDNLFKMVTFCENT 849
Query: 374 RTCRRKYLLNHFK---GSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVV 425
CRR LN+F + +A Q CDNCR+ + V + +V
Sbjct: 850 TDCRRALQLNYFGELFDREICIANKQT----ACDNCRNQGQFNVLDVTEDAKSLV 900
>gi|255719436|ref|XP_002555998.1| KLTH0H02706p [Lachancea thermotolerans]
gi|238941964|emb|CAR30136.1| KLTH0H02706p [Lachancea thermotolerans CBS 6340]
Length = 1403
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 165/288 (57%), Gaps = 12/288 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R ++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI
Sbjct: 754 LYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPDIPMIALTATASEQVRLDIV 813
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVI 243
+L L +P + F+R NLY K +++ D+ T F+NQ + IIYC +K
Sbjct: 814 HNLQLNNPVFLKQSFNRTNLYYEVLKKSKNVVFDICNAVKTRFKNQ---TGIIYCHSKNS 870
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
CE+ +L RNGI + YHA + +R E+ + + I+++ AT AFGMGIDKPDVR V
Sbjct: 871 CEQTASLLQRNGINSAYYHAGMEPDERLEVQQAWQANRIRIICATVAFGMGIDKPDVRFV 930
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKT 362
H P+ L YYQE GRAGRDG S C +Y D + Q + N D E +E T
Sbjct: 931 YHLTIPRTLEGYYQETGRAGRDGKFSFCIMYYTFRDVRTMQTMIQKDKNLDRENKEKHLT 990
Query: 363 MMKRVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
+++V +Y E L CRR+ +L++F + + + CDNC+++
Sbjct: 991 KLQQVMQYCENLADCRRQLVLSYFNENFDSAL-----CRRNCDNCKNS 1033
>gi|417769518|ref|ZP_12417434.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418705908|ref|ZP_13266761.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418712605|ref|ZP_13273339.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. UI 08452]
gi|409948668|gb|EKN98656.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pomona str. Pomona]
gi|410764437|gb|EKR35151.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410790897|gb|EKR84584.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. UI 08452]
Length = 624
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|320593232|gb|EFX05641.1| DNA/RNA helicase [Grosmannia clavigera kw1407]
Length = 1854
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 166/293 (56%), Gaps = 12/293 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R ++ + IDEAHCVSQWGHDFRP Y+ L E+R P VP++A+TATATP VI DI
Sbjct: 1060 LYRKKKLARLVIDEAHCVSQWGHDFRPDYKALGEVRRRFPSVPVMALTATATPNVIVDIK 1119
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVIC 244
+L + + + F+RPNLY K + ++ +L ++Q+ G T I+Y ++
Sbjct: 1120 HNLSIDGCKVFSQSFNRPNLYYEIREKGKGAVENIAEL--IQSQYSGQTGIVYTLSQKST 1177
Query: 245 EKVCDVL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
+ D L + GI YHA I ++ I + K IK+VVAT AFGMGIDKPDVR V
Sbjct: 1178 VSIADKLRDKFGISAHHYHAGIPADEKTRIQRDWQKGRIKIVVATIAFGMGIDKPDVRFV 1237
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE-HSKT 362
IH+ PK L YYQE GRAGRDG+ S C+ ++ D KN F + SE Q+ +
Sbjct: 1238 IHHYLPKSLEGYYQETGRAGRDGIHSDCFLYFSYGDI-KNLRKFIADSEGSEAQKARQRE 1296
Query: 363 MMKRVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
M+ R+ + E R CRR +L +F G + Q CDNC++ +L
Sbjct: 1297 MLNRMVDFCENKRDCRRSEILRYF-GENF----EQSGCGGTCDNCKYGGKFDL 1344
>gi|336417153|ref|ZP_08597482.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423298263|ref|ZP_17276322.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|335936778|gb|EGM98696.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392663679|gb|EIY57227.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 608
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 126 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 186 VRQLHLNHPRIFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRN 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFASESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 360 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 398
>gi|359399312|ref|ZP_09192316.1| ATP-dependent DNA helicase RecQ [Novosphingobium pentaromativorans
US6-1]
gi|357599352|gb|EHJ61066.1| ATP-dependent DNA helicase RecQ [Novosphingobium pentaromativorans
US6-1]
Length = 596
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 147/278 (52%), Gaps = 17/278 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ L AIDEAHCVS+WGHDFRP YR L L P VP LA+TATA DI L +
Sbjct: 134 RVSLFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPQVPRLALTATADHHTRADILAQLGI 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +I GFDRPN+ A +++ R+L + G IIY PT+ E++ +
Sbjct: 194 ADDGLIVAGFDRPNIRYAIRPRENAA----RQLKTLLEENPGPGIIYAPTRARVEQLAET 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L+ G + PYHA +S + R FV V+VAT AFGMGIDKPDVR V H G PK
Sbjct: 250 LAATGRRVLPYHAGLSPEIRARNQAAFVASEDMVMVATVAFGMGIDKPDVRFVAHAGIPK 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--IQEHSKTMMKRVE 368
+ YYQE GRAGRDG SV F+ DF + + L++ E Q+ + + +
Sbjct: 310 SIEGYYQETGRAGRDGDPSVAVMFWGADDFARARI----RLSEVEERRQQSERQRLDSLA 365
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+E CRR LL HF E P CDNC
Sbjct: 366 GLVETAQCRRAVLLRHF-------GEDPAPTCGNCDNC 396
>gi|421126850|ref|ZP_15587075.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410435705|gb|EKP84836.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
Length = 624
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 15 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 73
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 74 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 131
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 132 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 192 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 251
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 252 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 311
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 312 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 367
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 368 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 415
>gi|189466850|ref|ZP_03015635.1| hypothetical protein BACINT_03226 [Bacteroides intestinalis DSM
17393]
gi|189435114|gb|EDV04099.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 602
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 164/286 (57%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + +R P++P++A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMGFIREMFPNIPVIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 VRQLHLNQPKVFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIGRHRGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + G++ YHA +S +R E F+ D +++V AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKQGLRVAVYHAGLSSVRRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATESGQQGINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADVCRRRILLSYF-------GEATTEDCGNCDVCKN 392
>gi|346225175|ref|ZP_08846317.1| putative ATP-dependent DNA helicase [Anaerophaga thermohalophila
DSM 12881]
Length = 726
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 163/293 (55%), Gaps = 24/293 (8%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D I FL ++ +I A+DEAHC+S+WGHDFRP YR + + + + P++A+TATATP
Sbjct: 126 DENIQFLKQV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGEAPLIALTATATPK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTII 236
V DI +L + D N+ + F+RPNL+ K + DI+ L+ EN + S II
Sbjct: 185 VQHDIQKNLGMLDANVFKSSFNRPNLFYEIRPKVNATRDIIKVLK-----ENPGK-SVII 238
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC ++ E++ + L NGI+ PYHA + R F+ + I V+VAT AFGMGID
Sbjct: 239 YCLSRKKVEELAETLVVNGIKALPYHAGMDAATRSGNQDKFLMEDIDVIVATIAFGMGID 298
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSE 355
KPDVR VIHY PK L YYQE GRAGRDG C FY D K Q L + E
Sbjct: 299 KPDVRMVIHYDIPKSLEGYYQETGRAGRDGGEGRCIAFYSYKDIQKLEKFMQGKPLAEQE 358
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
I K ++ Y E CRRK LL++F G + T + C CDNC
Sbjct: 359 I---GKQLLLETVAYAESSLCRRKTLLHYF-GETYT-------EENCGSCDNC 400
>gi|317477615|ref|ZP_07936833.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316906220|gb|EFV27956.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 604
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/269 (43%), Positives = 158/269 (58%), Gaps = 9/269 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMGILHQQFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IKQLHLNHPRIFISSFDRPNLSL--TVKRGYQQKEKSKAIIDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKQGIRAAVYHAGLSPTRRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY +D ++ DS Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLSDL----ILLTKFATDSGQQSINIE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVT 391
++R+++Y E CRR+ LL++F G + T
Sbjct: 354 KLQRMQQYAESDICRRRILLSYF-GETAT 381
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 159/293 (54%), Gaps = 16/293 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R R+ IDEAHCVSQWGHDFRP Y+ L +R+ P VPI+A+TATAT V DI
Sbjct: 352 LVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRIRYPSVPIIALTATATKKVELDIL 411
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTKVIC 244
+L +R F+R NL K + D+ ++ + F + IIYC +K C
Sbjct: 412 ENLGIRGCETFKMSFNRSNLRYEVRAKTSTVELDI--VSFVQTHFPDCCGIIYCTSKKEC 469
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + D L + ++ YHA +S +R + + K KV+VAT AFGMGIDK DVR VI
Sbjct: 470 EMISDKLKKY-MKTAFYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVI 528
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDGL SVC FY D K + + + E ++ + +
Sbjct: 529 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQREDL 588
Query: 365 KRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLE 413
+ V ++ E +T CRR +L HF + P C CDNCR M++
Sbjct: 589 EAVIQFCENKTDCRRMQVLGHFG--------EKFDPQMCRKTCDNCRREAMVK 633
>gi|418711648|ref|ZP_13272405.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410768134|gb|EKR43390.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
Length = 631
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 138
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|359727110|ref|ZP_09265806.1| DNA helicase [Leptospira weilii str. 2006001855]
Length = 624
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 172/325 (52%), Gaps = 23/325 (7%)
Query: 129 IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDIC 185
+P++ L IA+DEAHCVSQWGHDFRP YR L ELR +PI+A+TATATP VI DI
Sbjct: 135 LPKLSLGRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYQRQIPIVALTATATPKVIQDIS 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPT 240
SL L++P +I F R NL + Q++ + L KL NF+ G IIYC T
Sbjct: 195 NSLGLKNPTLIKGSFYRENLNFSVRFPQNETSKENELLKLLIRGNFQKTESGKAIIYCAT 254
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + L +NG + YHA + R++ + V+VAT AFGMG+D PDV
Sbjct: 255 RQKVESTYNFLKKNGFKVGKYHAGRTDSSREKTQNGYNIGKTNVLVATNAFGMGLDNPDV 314
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R V+H+ P L +YYQE GRAGRDG SS C FY +D N I N ++
Sbjct: 315 RLVVHFQIPASLESYYQEAGRAGRDGKSSNCILFYHPSDLVTQNFIIGKENN----RKGG 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRG 420
+T++ V++Y CR++ L ++F ++ K CD C E + P G
Sbjct: 371 ETLLSFVKEYAISDRCRQQILCSYFG--------EEIKSCKTCDICSEKESSNI-SFPNG 421
Query: 421 GRMVVENSEVWMSTEARPGREAFEF 445
+E + + + RE ++F
Sbjct: 422 RDQFLEREKA--KKQKQEERERYDF 444
>gi|336115545|ref|YP_004570312.1| ATP-dependent DNA helicase RecQ [Bacillus coagulans 2-6]
gi|335368975|gb|AEH54926.1| ATP-dependent DNA helicase RecQ [Bacillus coagulans 2-6]
Length = 725
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 165/298 (55%), Gaps = 16/298 (5%)
Query: 111 LSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI- 169
L+ RL P P L L + LIA+DEAHC+SQWGHDFRPSYR + +L P+
Sbjct: 112 LAPERLEFP--PFLHLLENINVSLIAVDEAHCISQWGHDFRPSYRLIEKLISQFKPKPVT 169
Query: 170 LAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQ 229
LA+TATATP V DIC LM+ + N + TGF R NL+ QD L + +NQ
Sbjct: 170 LALTATATPQVKKDICQLLMIPEENTVATGFARENLHFQVVKGQDRDAFVLDYILKNKNQ 229
Query: 230 FEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATC 289
S IIY T+ E++ L +NGI+ YHA + +R F+ D + V+VAT
Sbjct: 230 ---SGIIYTATRKEAERIYHFLVKNGIRAGKYHAGMKETERDSFQDRFLYDDVSVMVATS 286
Query: 290 AFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQ 348
AFGMGIDK +VR VIHY PK++ AYYQE GRAGRDG S C + D T+ +I Q
Sbjct: 287 AFGMGIDKSNVRFVIHYHMPKNMEAYYQEAGRAGRDGEESDCILLFAPQDIHTQTFLIEQ 346
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
D + E++K ++++ Y C ++++L++F E + P C NC
Sbjct: 347 SANEDRKPGEYAK--LRKMIDYCHTEGCFQQFILHYF-------GEKEAQPCGKCGNC 395
>gi|156848959|ref|XP_001647360.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156118046|gb|EDO19502.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 1332
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 171/293 (58%), Gaps = 16/293 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA VI DI +L L
Sbjct: 681 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPLMALTATANERVILDINHNLSL 740
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIM----ADLRKLTNFENQFEGSTIIYCPTKVICEK 246
+DP + F+R NL+ +K + + D++ T F NQ + IIYC +K CE+
Sbjct: 741 KDPVFLKQSFNRTNLFYEIRIKNKNSIFEMCNDIK--TRFRNQ---TGIIYCHSKNSCEQ 795
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
++ R+G++ YHA + + R ++ + +D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 796 TASLIERSGVKCTYYHAGMEPEDRMKVQQAWQEDKIQVICATVAFGMGIDKPDVRFVYHF 855
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMK 365
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +K
Sbjct: 856 TVPRTLEGYYQETGRAGRDGNYSYCITYFSFKDIRSIQTMIQKDQNLDRENKEKHLNKLK 915
Query: 366 RVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQV 417
+V Y + + CRRK +L++F A+ Q K CDNC++++ + +++
Sbjct: 916 QVISYCDNIADCRRKLVLSYF-NEKFDEAKCQ----KNCDNCKNSDKVVTQEI 963
>gi|424842508|ref|ZP_18267133.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
gi|395320706|gb|EJF53627.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
Length = 737
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 165/290 (56%), Gaps = 18/290 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDD 183
FLS+I ++ +A+DEAHC+S+WGHDFRP YR + + + ++PI+A+TATATP V D
Sbjct: 132 FLSQI-KVSFVAVDEAHCISEWGHDFRPEYRRIRSMIENIEQEIPIIALTATATPKVRMD 190
Query: 184 ICTSLMLRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCP 239
I +L L P F+R NL+ + K++D+ LR++ F + S IIY
Sbjct: 191 IVKTLRLEAPREFMDSFNRDNLFYEVQPKGKKEDV---LRRIVQFIKDKAPNESGIIYVQ 247
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
+ E+V VLS N I+ PYHA + K R + F+ + + V+VAT AFGMGIDKPD
Sbjct: 248 NRKTTEEVAKVLSVNDIKAAPYHAGLEAKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPD 307
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--Q 357
VR VIHY PK + YYQE GRAGRDG + C TFY D + + L D + +
Sbjct: 308 VRFVIHYDIPKSIENYYQETGRAGRDGQHAHCLTFYSYKDILR----LEKFLRDKPVAER 363
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
E ++ + Y E CRR++LL++F + D+ CDNC+
Sbjct: 364 EMGAQLLAEMIAYAETTACRRRFLLHYF---GEKYKDEVCRRDQMCDNCK 410
>gi|443309958|ref|ZP_21039633.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
gi|442780011|gb|ELR90229.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
Length = 724
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 160/281 (56%), Gaps = 10/281 (3%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LS+ LP D+ + I AIDEAHCVS+WGHDFRP YR L LR P+VP
Sbjct: 119 RLLSDRFLPFIDL----VQHQIGIASFAIDEAHCVSEWGHDFRPDYRQLRALRQRYPNVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+A+TATAT V DI L L P I F+RPNLY KQ L++L
Sbjct: 175 TIALTATATDRVRSDIIQQLNLTKPIIHVASFNRPNLYYDVQPKQKQAYNQLKQLVT--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+ EG+ IIYC ++ + + L ++GI PYHA +S +R+ F++D +++VAT
Sbjct: 232 KHEGAGIIYCLSRRKVDDITMKLQQDGISALPYHAGLSDAERESNQTRFIRDDARLMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIF 347
AFGMGI+KPDVR VIHY P+++ +YYQE GRAGRDG ++ C F+ D T +I
Sbjct: 292 VAFGMGINKPDVRFVIHYDLPRNIESYYQESGRAGRDGGAARCTIFFGYGDVKTVEYLID 351
Query: 348 QPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGS 388
Q D + Q +K ++++ Y + CRR L +F S
Sbjct: 352 QK--TDVQEQRIAKQQLRQIIDYAQGTVCRRTIQLGYFGES 390
>gi|336406152|ref|ZP_08586813.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|423216120|ref|ZP_17202645.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295085102|emb|CBK66625.1| ATP-dependent DNA helicase, RecQ-like [Bacteroides xylanisolvens
XB1A]
gi|335935401|gb|EGM97353.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|392690971|gb|EIY84222.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 602
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 158/286 (55%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 120 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K L E S IIYC ++
Sbjct: 180 VRQLHLNHPRTFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGEESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL----ILLTKFASESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 392
>gi|182415498|ref|YP_001820564.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
gi|177842712|gb|ACB76964.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
Length = 612
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 165/282 (58%), Gaps = 16/282 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I +AIDEAHC+S+WGHDFRP YR L++LR LPDVP +A+TATAT V DI
Sbjct: 131 RAWQIACLAIDEAHCISEWGHDFRPEYRQLAKLRRALPDVPAMALTATATTRVRADIIEH 190
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L LR+P + F+RPNL K L+++ +F + E S IIYC ++ E+
Sbjct: 191 LKLREPAVFVASFNRPNLTYRVIPKDQP----LKQIIDFVRKREDESGIIYCASRAAAER 246
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ + L+ G +PYHA ++ +R F++D ++V AT AFGMGI+KP+VR VIH+
Sbjct: 247 LAESLAGRGFSAKPYHAGLTADERTRHQEEFLRDDARIVCATIAFGMGINKPNVRWVIHH 306
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ YYQE GRAGRDGL C + D K + F + D + Q+ ++T +++
Sbjct: 307 DLPKNIEGYYQETGRAGRDGLPGDCLLLFSAGDIAK-QLHFLDEITDEQEQQIARTQLRK 365
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y E CRR LL +F G + V D C CDNC
Sbjct: 366 IVHYAESAGCRRAELLAYF-GETFGV-------DNCGACDNC 399
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 64 QVVYMTPE-YVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 122
+++Y+ PE + N R +I +AIDEAHC+S+WGHDFRP YR L++LR LPDVP
Sbjct: 112 KLLYVAPERLMLNGWQDNLRAWQIACLAIDEAHCISEWGHDFRPEYRQLAKLRRALPDVP 171
>gi|402830902|ref|ZP_10879596.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
gi|402283336|gb|EJU31854.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
Length = 729
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 156/262 (59%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R I +A+DEAHC+S+WGHDFRP YR + + L + +PI+A+TATAT V +DI
Sbjct: 134 RTINISFVAVDEAHCISEWGHDFRPEYRNIKTIIERLGEGIPIIALTATATTKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + N+ + F+RPNLY K +I +D+ + F Q G S IIYC ++ E
Sbjct: 194 NLGIPQANVFKSSFNRPNLYYEVRPKTKNINSDIIR---FVKQRPGQSGIIYCLSRKSVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L NGI PYHA + K R + +F+ + ++VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQTLQVNGITAIPYHAGLDAKTRAKHQDMFLMEEVEVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
Y PK + +YYQE GRAGRDG C FY D K M+ +P QE + +
Sbjct: 311 YDIPKSIESYYQETGRAGRDGGEGYCLAFYCYKDIEKLEKFMVSKPIAE----QEVGQAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ + Y E + RRK++L++F
Sbjct: 367 LQDMVAYAETSSSRRKFILHYF 388
>gi|418681397|ref|ZP_13242627.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418731207|ref|ZP_13289620.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. UI 12758]
gi|421117177|ref|ZP_15577546.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|400326881|gb|EJO79140.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|410011306|gb|EKO69428.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410774102|gb|EKR54121.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
str. UI 12758]
gi|455669700|gb|EMF34765.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 631
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 138
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|257458284|ref|ZP_05623433.1| ATP-dependent DNA helicase RecQ [Treponema vincentii ATCC 35580]
gi|257444311|gb|EEV19405.1| ATP-dependent DNA helicase RecQ [Treponema vincentii ATCC 35580]
Length = 650
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 167/292 (57%), Gaps = 18/292 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
IL + +P + I IDEAHC+S+WGHDFRP Y +S +R LA+TATAT V
Sbjct: 143 ILHDASVP-VSCITIDEAHCISEWGHDFRPGYLEISNVRAQFSGAVCLALTATATAQVRA 201
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L ++ P + GF+RPN++L K++ LR++ + G S IIYC ++
Sbjct: 202 DITVNLRMQAPEVFIAGFNRPNIFLEVRPKRNA----LREVIACIEKHSGESGIIYCFSR 257
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+ + + L +G YHA +S ++RK+ F++D I+++VAT AFGMGIDKP+VR
Sbjct: 258 NQVDTLTEKLKDSGYSVLNYHAGLSDEERKDHQQQFIRDKIRIMVATVAFGMGIDKPNVR 317
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQEIGRAGRDGL+S Y D K F +D+ +S+
Sbjct: 318 FVIHYDLPKSLEEYYQEIGRAGRDGLASHALLLYSAGDARKIRSFF----SDAADSANSE 373
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD-------KCCDNC 406
+++ + K+ RTCRR +LL++F G AES D CCD C
Sbjct: 374 RLLQAMLKFASARTCRRHFLLSYF-GERFMPAESGAESDCGQSDAFPCCDVC 424
>gi|357973909|ref|ZP_09137880.1| ATP-dependent DNA helicase RecQ [Sphingomonas sp. KC8]
Length = 589
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 150/284 (52%), Gaps = 16/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+ R P + LIAIDEAHCVS+WGHDFRP YR L L D P LA+TATA DI
Sbjct: 123 LIDRAPPLALIAIDEAHCVSEWGHDFRPDYRLLRPLLDAQRDTPRLALTATADKHTRADI 182
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
T L + D +I GFDRPN+ A S +D + L L N + EG IIY ++
Sbjct: 183 LTQLGIPDDGLILAGFDRPNIRYAIS-PRDGLPGQLAALVN---EIEGPGIIYATSREAT 238
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ L++ G R YHA + R FV V+VAT AFGMGIDKPDVR V
Sbjct: 239 ERLAASLAKAGRPTRAYHAGLDPSVRAANQRAFVSSEDMVMVATIAFGMGIDKPDVRFVA 298
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H G PK + AYYQE GRAGRDG +V + F+ DF + + ++ ++ + +
Sbjct: 299 HAGLPKSIEAYYQETGRAGRDGDPAVAHLFWGAEDFARARRRIETDVEEAR-RPGERQRQ 357
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E CRR LL HF + PP C CDNC
Sbjct: 358 NALAGLVESAGCRRAVLLRHF---------GETPPLACGNCDNC 392
>gi|421137016|ref|ZP_15597110.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410018759|gb|EKO85590.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
Length = 631
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLS---RIPRIV 133
++ + D+ + G D R LS R + IL+LS + R V
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQV 138
Query: 134 L----------IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|365875470|ref|ZP_09414998.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442588734|ref|ZP_21007544.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
gi|365756729|gb|EHM98640.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442561492|gb|ELR78717.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
Length = 735
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 151/264 (57%), Gaps = 8/264 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I F +P I AIDEAHC+S+WGHDFRP YR L + + DVP++A+TATATP V D
Sbjct: 130 IDFFKEVP-ISFFAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTATATPKVQD 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + + F+RPNL+ K + I ++ K +N G I+YC ++
Sbjct: 189 DIQKTLGMTNALVYKESFNRPNLFYEVRPKVN-IDKEIVKFIKAQNGKSG--IVYCLSRR 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E+ +L NG+ PYHA + K R F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 246 KVEEFAQLLQVNGLNALPYHAGLDAKTRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRF 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSK 361
VIHY PK L +YYQE GRAGRDG C FY D K + Q +++ EI
Sbjct: 306 VIHYDIPKSLESYYQETGRAGRDGGEGHCIAFYDPKDIEKLEKFLAQKPVSEREI---GL 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
++ V Y+E RR+YLL +F
Sbjct: 363 QLLNEVVGYVETSMSRRQYLLYYF 386
>gi|334147314|ref|YP_004510243.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis TDC60]
gi|333804470|dbj|BAK25677.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis TDC60]
Length = 725
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 156/287 (54%), Gaps = 17/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL I I AIDEAHC+S+WGHDFRP YR + + + I+A+TATATP V
Sbjct: 127 IAFLREID-ISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPRSIIALTATATPKVQH 185
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D ++ + F+RPNL+ K D+ D+ K +Q S I+YC ++
Sbjct: 186 DIQKNLGMMDADVFKSSFNRPNLFYHIRPKTQDVDRDVVKY--ILSQPGKSGIVYCMSRN 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
VL NGI+ PYHA + +R F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 244 KVTTFAQVLQANGIKALPYHAGLDAGERASNQDAFLNEEISVIVATIAFGMGIDKPDVRY 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C FY+ D + Q +++ EI +
Sbjct: 304 VIHYDMPKSLEGYYQETGRAGRDGGEGECIAFYRPKDLQRLEKFMQGKPISEQEI---GR 360
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ + E R CRRK LL++F G T + C CDNC
Sbjct: 361 QLLAETAAFAESRVCRRKLLLHYF-GEDYT-------QENCGACDNC 399
>gi|334142832|ref|YP_004536040.1| ATP-dependent DNA helicase RecQ [Novosphingobium sp. PP1Y]
gi|333940864|emb|CCA94222.1| ATP-dependent DNA helicase RecQ [Novosphingobium sp. PP1Y]
Length = 638
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 147/278 (52%), Gaps = 17/278 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ L AIDEAHCVS+WGHDFRP YR L L P VP LA+TATA DI L +
Sbjct: 176 RVSLFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPQVPRLALTATADHHTRADILAQLGI 235
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +I GFDRPN+ A +++ R+L + G IIY PT+ E++ +
Sbjct: 236 ADDGLIVAGFDRPNIRYAIRPRENAA----RQLKTLLEENPGPGIIYAPTRARVEQLAET 291
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L+ G + PYHA +S + R FV V+VAT AFGMGIDKPDVR V H G PK
Sbjct: 292 LAATGRRVLPYHAGLSPEIRARNQAAFVASEDMVMVATVAFGMGIDKPDVRFVAHAGIPK 351
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--IQEHSKTMMKRVE 368
+ YYQE GRAGRDG SV F+ DF + + L++ E Q+ + + +
Sbjct: 352 SIEGYYQETGRAGRDGDPSVAVMFWGADDFARARI----RLSEVEERRQQSERQRLDSLA 407
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+E CRR LL HF E P CDNC
Sbjct: 408 GLVETAQCRRAVLLRHF-------GEDPAPTCGNCDNC 438
>gi|295133000|ref|YP_003583676.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981015|gb|ADF51480.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 731
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 149/258 (57%), Gaps = 9/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSEL-RLPLPDVPILAVTATATPVVIDDICTSLM 189
+I +AIDEAHC+S+WGHDFRP YR L ++ + ++PI+A+TATATP V +DI +L
Sbjct: 137 KISFLAIDEAHCISEWGHDFRPEYRNLRQIIKRIGENIPIIALTATATPKVQEDILKNLG 196
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ F+RPNLY K ++ AD+ + N G IIYC ++ E++
Sbjct: 197 IPKAKTFKASFNRPNLYYEVRPKTKNVDADIIRFVKQNNGKSG--IIYCLSRKKVEELAQ 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR VIH+ P
Sbjct: 255 TLQVNGINAIPYHAGLDAKTRSKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K + +YYQE GRAGRDG C FY D K M +P QE +++ V
Sbjct: 315 KSIESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAE----QEVGHALLQEV 370
Query: 368 EKYLELRTCRRKYLLNHF 385
Y E RRK++L++F
Sbjct: 371 VAYAETSISRRKFILHYF 388
>gi|294672822|ref|YP_003573438.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473845|gb|ADE83234.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 722
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 154/284 (54%), Gaps = 16/284 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI +
Sbjct: 129 RSVKISFYAIDEAHCISEWGHDFRPEYRKIRPIVNEIGKAPIIALTATATDKVRTDIKKN 188
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L + D + F+RPNLY K ++ D+ K F Q G S IIYC ++ E+
Sbjct: 189 LGIVDAAEFKSSFNRPNLYYEVRPKTANVDKDIIK---FIKQHPGKSGIIYCLSRKKVEE 245
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ ++L NGI+ YHA + R F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 246 LAEILRVNGIKAAAYHAGLDSNTRSNTQDEFLMENIDVIVATIAFGMGIDKPDVRFVIHY 305
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK L YYQE GRAGRDG +C FY D K + F +E Q+ + ++
Sbjct: 306 DIPKSLEGYYQETGRAGRDGGEGICLAFYSYKDLQKLDK-FMEGKPVAE-QDIGRQLLVE 363
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
Y E CRRK LL++F + D C CDNC H
Sbjct: 364 TAAYAETSVCRRKMLLHYFGET--------YEKDNCGNCDNCLH 399
>gi|228473728|ref|ZP_04058475.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
gi|228274840|gb|EEK13658.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
Length = 729
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 158/265 (59%), Gaps = 12/265 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDD 183
FL I I +A+DEAHC+S+WGHDFRP YR + + L + +PI+A+TATAT V +D
Sbjct: 132 FLKTI-NISFVAVDEAHCISEWGHDFRPEYRNIKTIIERLGEGIPIIALTATATTKVQED 190
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKV 242
I +L + + N+ + F+RPNLY K +I +D+ + F Q G S IIYC ++
Sbjct: 191 ILKNLGVPEANVFKSSFNRPNLYYEVRPKTKNINSDIIR---FVKQRPGQSGIIYCLSRK 247
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR
Sbjct: 248 SVEELAQTLQVNGITAIPYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRF 307
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHS 360
VIHY PK + +YYQE GRAGRDG C FY D K M+ +P QE
Sbjct: 308 VIHYDIPKSIESYYQETGRAGRDGGEGYCLAFYCYKDIEKLEKFMVGKPIAE----QEVG 363
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E + RRK++L++F
Sbjct: 364 QALLQDMVAYAETSSSRRKFILHYF 388
>gi|193212332|ref|YP_001998285.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
gi|193085809|gb|ACF11085.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
Length = 609
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 157/279 (56%), Gaps = 16/279 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I + IDEAHC+S+WGHDFRP Y LS L LPDVP+ A TATAT V DI + L LR
Sbjct: 140 ISIAVIDEAHCISEWGHDFRPDYLSLSSLVELLPDVPVAAFTATATQKVQRDIVSKLGLR 199
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
DP ++ FDRPNL K+ A +L + N+F G S IIY ++ +
Sbjct: 200 DPFVLRASFDRPNLTYEVRFKE----AGESQLVSLLNEFSGQSGIIYRTSRKSVNDTAAM 255
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + GI+ PYHA ++ ++R + F++D + V+VAT AFGMGIDK +VR VIH PK
Sbjct: 256 LQKRGIRALPYHAGLADRERHDNQEAFIRDEVDVIVATVAFGMGIDKSNVRFVIHADLPK 315
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ +YYQE GRAGRDG +S C + AD K L++ E + + + +V +
Sbjct: 316 SIESYYQETGRAGRDGENSRCIMLFSHADIPKVRFFIDAMLDEDE-RRRALDALSKVVAF 374
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
CRR+ LL HF + ++P D C CD C+
Sbjct: 375 ASSTVCRRRMLLEHF--------DEELPGDNCGSCDVCQ 405
>gi|432332157|ref|YP_007250300.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
gi|432138866|gb|AGB03793.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
Length = 611
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 160/289 (55%), Gaps = 17/289 (5%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS + R+ LIAIDEAHC+S+WGH+FRP YR L+ ++ P +P++A+TATA P V
Sbjct: 122 FLSSLATARVRLIAIDEAHCISEWGHNFRPEYRQLARIKEVFPGIPLIALTATAIPGVRR 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTK 241
DI L + F+R NL K++ ++ L ++ Q E S I+YC ++
Sbjct: 182 DIRQQLKMECAREFTGSFNRKNLRYRVVPKKNPLVF----LADYLGQHREESGIVYCLSR 237
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E V L + G YHA +S ++R+ + F++D ++VV AT AFGMGIDKPDVR
Sbjct: 238 SETETVAGDLQQRGFSAAAYHAGLSRQERERVQESFIRDRVQVVCATVAFGMGIDKPDVR 297
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG S C Y D+ + + + + + + S
Sbjct: 298 FVIHYDLPKTLEGYYQETGRAGRDGQYSECVLLYSRGDYARIRSLLEQGDSGGQHLKVSL 357
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ +++Y E CRRK+LL +F P + C CD C H
Sbjct: 358 AKLRDMQEYCETTGCRRKFLLTYFG--------EDYPEENCGSCDTCDH 398
>gi|34540239|ref|NP_904718.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis W83]
gi|419970113|ref|ZP_14485623.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis W50]
gi|34396551|gb|AAQ65617.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis W83]
gi|392611528|gb|EIW94264.1| ATP-dependent DNA helicase RecQ [Porphyromonas gingivalis W50]
Length = 725
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 156/287 (54%), Gaps = 17/287 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL I I AIDEAHC+S+WGHDFRP YR + + + I+A+TATATP V
Sbjct: 127 IAFLREID-ISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPRSIIALTATATPKVQH 185
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D ++ + F+RPNL+ K D+ D+ K +Q S I+YC ++
Sbjct: 186 DIQKNLGMMDADVFKSSFNRPNLFYHIRPKTQDVDRDVVKY--ILSQPGKSGIVYCMSRN 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
VL NGI+ PYHA + +R F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 244 KVTTFAQVLQANGIKALPYHAGLDAGERASNQDAFLNEEISVIVATIAFGMGIDKPDVRY 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C FY+ D + Q +++ EI +
Sbjct: 304 VIHYDMPKSLEGYYQETGRAGRDGGEGECIAFYRPKDLQRLEKFMQGKPISEQEI---GR 360
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ + E R CRRK LL++F G T + C CDNC
Sbjct: 361 QLLAETAAFAESRVCRRKLLLHYF-GEDYT-------QENCGACDNC 399
>gi|307152715|ref|YP_003888099.1| RecQ family ATP-dependent DNA helicase [Cyanothece sp. PCC 7822]
gi|306982943|gb|ADN14824.1| ATP-dependent DNA helicase, RecQ family [Cyanothece sp. PCC 7822]
Length = 717
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 166/305 (54%), Gaps = 15/305 (4%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE P D L + I AIDEAHCVS+WGHDFRP YR L +LR P VP
Sbjct: 128 RLLSEKFTPFLDKIALDVG----ISAFAIDEAHCVSEWGHDFRPEYRQLRQLRQRYPSVP 183
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+ +TATAT V +DI L L++P + F+RPNLY KQ L K +
Sbjct: 184 MFGLTATATKRVQEDIIVQLGLKNPGVHIASFNRPNLYYDVRPKQQRSYDQLLKYIRTQ- 242
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+GS I+YC ++ +++ L ++GI PYHA ++ + R F++D +V+VAT
Sbjct: 243 --KGSGIVYCLSRRNVDEIAFRLQKDGISALPYHAGMTDEARTLNQTRFIRDDAQVMVAT 300
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+K DVR V+H+ P++L +YYQE GRAGRDG + C F D K I +
Sbjct: 301 IAFGMGINKLDVRFVVHFDLPRNLESYYQESGRAGRDGEPAKCTIFLGFGDLKKIEYIIE 360
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
N E ++ ++ +++V Y E CRR +L +F E CDNCRH
Sbjct: 361 QKSNPQE-KKIAQQQLRQVINYAEGTECRRTIVLRYF-------GERFQGNCDNCDNCRH 412
Query: 409 NEMLE 413
+ +E
Sbjct: 413 PQPVE 417
>gi|158338684|ref|YP_001519861.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
gi|158308925|gb|ABW30542.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
Length = 736
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ A+DEAHCVS+WGHDFRP YR L+E+R VP+ A+TATAT V DI L LR
Sbjct: 146 LAAFAVDEAHCVSEWGHDFRPEYRRLAEVRQRYTQVPVYALTATATERVRQDIIQQLQLR 205
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P + F+RPNLY K + ADL + Q G I+YC ++ ++ L
Sbjct: 206 QPFVHVASFNRPNLYYEVRPKSRQVYADLYREIRQHGQDSG--IVYCLSRREVNEISARL 263
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+GI PYHA +S R F++D ++V+VAT AFGMGIDKPDVR VIHY P++
Sbjct: 264 QADGISALPYHAGMSDSARTLNQERFIRDDVQVMVATVAFGMGIDKPDVRFVIHYNLPRN 323
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ---------PNLNDSEIQEHSKT 362
+ YYQE GRAGRDG S C F+ T D + + P N+ I ++
Sbjct: 324 IEGYYQESGRAGRDGEPSKCLLFFSTKDIHTIEWLIERKADPETGNPLENEQRI---ARQ 380
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVP 418
+++V Y E CRR L +F E+ CDNC H + +E +P
Sbjct: 381 QLRQVIDYAESTVCRRTVQLGYF-------GETFAGDCGGCDNCCHPKPVEDWTIP 429
>gi|410100569|ref|ZP_11295529.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409215604|gb|EKN08603.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 611
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 158/283 (55%), Gaps = 22/283 (7%)
Query: 129 IPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICT 186
+PR I LIAIDEAHC+S WGHDFRP Y LS L+ P VPI+A+TATA V DI T
Sbjct: 126 LPRMDISLIAIDEAHCISHWGHDFRPEYTQLSVLKEQFPKVPIVALTATADKVTRTDIVT 185
Query: 187 SLMLRDPNIINTGFDRPNLYLA---ASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
L LRDP + + FDRPNL L K++ A + + +Q S I+YC ++
Sbjct: 186 QLKLRDPEVFVSSFDRPNLSLTIRRGLNKKEKTSAIVHFIHAHRHQ---SGIVYCMSRNS 242
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + + LS GI+ YHA + QR++ F+ D + VV AT AFGMGIDK +VR V
Sbjct: 243 TENLAEELSSYGIKAVAYHAGLPPVQREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWV 302
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
+HY P + YYQEIGRAGRDG+ S FY D ++ + +S ++ +
Sbjct: 303 VHYNMPGSIENYYQEIGRAGRDGMKSDTLLFYSVGDL----LVLRRFAEESGQRDTNLQK 358
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+ +Y E CRR+ LL++F S D+ C NC
Sbjct: 359 LNRMRRYCEADICRRRILLSYFGEES----------DQDCGNC 391
>gi|298480716|ref|ZP_06998912.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273150|gb|EFI14715.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 621
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 158/286 (55%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 139 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 198
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K L E S IIYC ++
Sbjct: 199 VRQLHLNHPRTFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGEESGIIYCMSRS 256
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 257 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 316
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 317 VIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL----ILLTKFASESNQQNINLE 372
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 373 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 411
>gi|126179265|ref|YP_001047230.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
gi|125862059|gb|ABN57248.1| ATP-dependent DNA helicase, RecQ family [Methanoculleus marisnigri
JR1]
Length = 419
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 151/284 (53%), Gaps = 10/284 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I ++ +P + LIA+DEAHC+S WGH FRP YR LS L+ P VP++A+TATATP V D
Sbjct: 123 IDLMASLP-VTLIAVDEAHCISMWGHQFRPEYRSLSVLKERFPGVPMVALTATATPDVRD 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L DP++ F+R NL K++D LR G I+Y T+
Sbjct: 182 DIARQLNLSDPSVYVGSFNRENLRYVVVGKEEDAYERLRAYLRGRRGDAG--IVYVATRD 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L GI PYHA ++ R+E F+ + VV AT AFGMGIDKPDVR
Sbjct: 240 GAETLAARLRAGGIPALPYHAGMTAAARRETQDRFIGGKVPVVCATSAFGMGIDKPDVRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK L AYYQE GRAGRDG S C +Y D + +L ++ +++
Sbjct: 300 VVHYDMPKTLEAYYQESGRAGRDGKESDCILYYSDEDARRLRSFIDRDLASEFQRKVARS 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ + Y CRRK LL +F E P CD C
Sbjct: 360 KLQSMVDYCTTTECRRKALLGYF-------GERIEEPCNGCDAC 396
>gi|333381389|ref|ZP_08473071.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
gi|332830359|gb|EGK02987.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
Length = 731
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 153/284 (53%), Gaps = 11/284 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL +I +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATATP V
Sbjct: 130 IDFLRQI-KISFYAIDEAHCISEWGHDFRPEYRRIRPIVTEIGKHPIIALTATATPKVQL 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D ++ F+R NL+ K +++ D+ K ++Q S IIYC ++
Sbjct: 189 DIQKNLGMVDADVFKASFNRENLFYEVRSKTNNVDKDIIKY--IKSQGHKSGIIYCLSRK 246
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E+ ++L N I PYHA + R F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 247 KVEEFAEILQTNNINALPYHAGLDANTRSANQDAFLMEQVDVIVATIAFGMGIDKPDVRY 306
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK L YYQE GRAGRDG C FY D K Q QE K
Sbjct: 307 VIHYDMPKSLEGYYQETGRAGRDGGEGKCIAFYSFKDLQKLEKFMQGKPVAE--QEIGKQ 364
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ Y E CR+K LL++F E +V CDNC
Sbjct: 365 LLLETAAYAETALCRKKVLLHYFG------EEYKVRNCGNCDNC 402
>gi|150008998|ref|YP_001303741.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|255014829|ref|ZP_05286955.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_1_7]
gi|256841001|ref|ZP_05546508.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262383888|ref|ZP_06077024.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298375770|ref|ZP_06985726.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|301312048|ref|ZP_07217970.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|410102762|ref|ZP_11297687.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
gi|423330257|ref|ZP_17308041.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|423339397|ref|ZP_17317138.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|149937422|gb|ABR44119.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|256736844|gb|EEU50171.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262294786|gb|EEY82718.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298266807|gb|EFI08464.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|300830150|gb|EFK60798.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|409230778|gb|EKN23639.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|409231873|gb|EKN24721.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|409237889|gb|EKN30684.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
Length = 726
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 153/285 (53%), Gaps = 17/285 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL ++ +I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLRQV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPKVQHDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D + + F+R NLY K +I R++ + EG S I+YC ++
Sbjct: 190 QKNLGMIDATVFKSSFNRSNLYYEVRPKGTNID---REIIKYIKANEGKSGIVYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ D+L NGI+ PYHA + + R F+ + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFADILKANGIKALPYHAGMDSQVRSANQDAFLMEQADVIVATIAFGMGIDKPDVRYV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG C FY D K Q QE K +
Sbjct: 307 IHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QEIGKQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y E CRRK LL++F + D C CDNC
Sbjct: 365 LLETAAYAETSVCRRKVLLHYFG--------EEYLEDNCGNCDNC 401
>gi|167761544|ref|ZP_02433671.1| hypothetical protein CLOSCI_03955 [Clostridium scindens ATCC 35704]
gi|336422640|ref|ZP_08602783.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
5_1_57FAA]
gi|167661210|gb|EDS05340.1| ATP-dependent DNA helicase RecQ [Clostridium scindens ATCC 35704]
gi|336007813|gb|EGN37834.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
5_1_57FAA]
Length = 622
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 163/293 (55%), Gaps = 21/293 (7%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDI 184
+S +I +A+DEAHCVSQWG DFRPSY + + LP P++ A TATAT V DDI
Sbjct: 129 MSEGIKISFLAVDEAHCVSQWGQDFRPSYLKILDFLKKLPYRPVIGAYTATATTGVRDDI 188
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVI 243
L L+DP++I TGFDR NLY A D + + E + GS+ I+YC T+
Sbjct: 189 MDILQLQDPSVITTGFDRENLYFAVRKPVDKYKELVSYIRRKEKEMPGSSGIVYCLTRKN 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E VC L + G YHA +S +RKE F+ D +++VAT AFGMGIDK DVR V
Sbjct: 249 VEDVCYNLRKEGFSVTRYHAGLSDMERKENQDDFIYDRRQIMVATNAFGMGIDKSDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK++ +YYQE GRAGRDG S C +Y+ D N + N ++ + E ++ +
Sbjct: 309 IHYNMPKNMESYYQEAGRAGRDGEPSDCILYYEPMDVRTNRFFIENNEDNEALDEITRRL 368
Query: 364 MK-RVEKYLELRT-------CRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+K R E+ L T C R Y+L++F + P C C NC
Sbjct: 369 VKERDEERLRQMTFYCFTTGCLRNYILDYF---------GEASPGYCGNCLNC 412
>gi|226226370|ref|YP_002760476.1| ATP-dependent DNA helicase RecQ [Gemmatimonas aurantiaca T-27]
gi|226089561|dbj|BAH38006.1| ATP-dependent DNA helicase RecQ [Gemmatimonas aurantiaca T-27]
Length = 524
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 158/296 (53%), Gaps = 16/296 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+ +DEAHC+SQWGHDFRPSYR L L+ L DVP+LA+TATAT V DI L ++
Sbjct: 141 ISLLVVDEAHCISQWGHDFRPSYRRLQGLKQQL-DVPVLALTATATRDVARDILRQLGMK 199
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P F RPNL + K LT S I+YC ++ E+ + L
Sbjct: 200 KPAGFKGSFFRPNLRIGVRKKGQGGNTRREILTLVRAHAGESGIVYCQSRKGVEQTAEFL 259
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ G++ YHA + ++R F +D I V+VAT AFGMGIDK +VR VIH PKD
Sbjct: 260 VQQGVKALSYHAGLDAEERARNQEAFQRDDIDVMVATVAFGMGIDKSNVRFVIHRDMPKD 319
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ ++YQEIGRAGRDGL S C FY AD + F L D ++E + K + +
Sbjct: 320 IESWYQEIGRAGRDGLPSDCIMFYSWADVIAHER-FLDRLEDEALRERTHAATKALFNLI 378
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-------RHNEMLELEQVPRG 420
E +CR + L+ HF E+ P CD+C R E E E+V +G
Sbjct: 379 ERSSCRHQALVRHFD-------EAVEPCGTSCDHCTGESVEDRIAEAAEQERVAQG 427
>gi|345885011|ref|ZP_08836404.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
gi|345042066|gb|EGW46174.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
Length = 727
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 156/289 (53%), Gaps = 19/289 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI
Sbjct: 131 FLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRCAIESIGTAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K+ D + +++ F Q G S IIYC ++
Sbjct: 190 VRSLGIEDCAEFKSSFNRPNLYYEVRPKKSDDDTN-KQIIKFIKQHAGKSGIIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ PYHA + + R + F+ + + ++VAT AFGMGIDKPDVR V
Sbjct: 249 VEELAAILKANDIKAAPYHAGLDSETRSKAQDDFLMEELDIIVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH--SK 361
IHY PK L YYQE GRAGRDG +C FY D K + + I E +
Sbjct: 309 IHYDIPKSLEGYYQETGRAGRDGEEGICIVFYSKKDLNK----LEKFMEGKPIAEQDIGR 364
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+++ E Y E CRRK LL++F P C CDNC H
Sbjct: 365 QLLQETEAYAESSVCRRKMLLHYFG--------EDYPKCNCSMCDNCLH 405
>gi|186683728|ref|YP_001866924.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
gi|186466180|gb|ACC81981.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
Length = 719
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 164/302 (54%), Gaps = 19/302 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D L +I I AIDEAHCVS+WGHDFRP YR + LR PDVP
Sbjct: 119 RLLSERFLPFLD---LVKEKIG-IAAFAIDEAHCVSEWGHDFRPEYRQMKSLRKRYPDVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
LA+TATAT V DI L L+ P+I F+R NLY K A+L +L EN
Sbjct: 175 TLALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRSKTKSAYAELLELIR-EN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ +++ L + I YHA +S ++R F++D ++V+VAT
Sbjct: 234 --EGSAIIYCLTRKKVDELTFKLQNDKISALSYHAGLSDEERSSNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIH+ P++L +YYQE GRAGRD S C F+ +D
Sbjct: 292 IAFGMGINKPDVRLVIHFDLPRNLESYYQESGRAGRDSEPSRCTLFFSFSDIKTIEWSID 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
D + Q +K +++V Y + CRR L +F + C CDNC
Sbjct: 352 QK-TDPQEQLIAKQQLRQVIDYAQGTVCRRTIQLGYF---------GERFDGNCANCDNC 401
Query: 407 RH 408
R+
Sbjct: 402 RY 403
>gi|456864278|gb|EMF82677.1| ATP-dependent DNA helicase, RecQ family [Leptospira weilii serovar
Topaz str. LT2116]
Length = 514
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 63 RQVVYMTPEYVTNNTSFLSRIPRIVLI----------AIDEAHCVSQWGHDFRPSYRCLS 112
+ ++Y P + ++ L P I L+ I +C S D R LS
Sbjct: 52 KSLIYQLPAVLDQSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNST--QDDLEQLRILS 109
Query: 113 ELRLPLPDVPILFLS---RIPRIVL----------IAIDEAHCVSQWGHDFRPSYRCLSE 159
R + IL+LS + R VL IA+DEAHCVSQWGHDFRP YR L E
Sbjct: 110 --RASTGKIQILYLSPEKALSRQVLEILPKLPLGRIAVDEAHCVSQWGHDFRPEYRKLYE 167
Query: 160 LRLPLP-DVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA 218
LR +PI+A+TATATP VI DI SL L++P +I F R NL + Q++
Sbjct: 168 LRDKYQRQIPIVALTATATPKVIQDISNSLGLKNPTLIKGSFYRENLNFSVLFPQNETSK 227
Query: 219 D--LRKL---TNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEI 273
+ L KL NF+ G IIYC T+ E + + L +NG + YHA + R++
Sbjct: 228 ENELLKLLIRGNFQKTESGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKT 287
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
+ V+VAT AFGMG+D PDVR V+H+ P L +YYQE GRAGRDG SS C
Sbjct: 288 QNGYNIGKTNVLVATNAFGMGLDNPDVRLVVHFQIPASLESYYQEAGRAGRDGKSSNCIL 347
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVA 393
FY +D N I N ++ +T++ V++Y CR++ L ++F
Sbjct: 348 FYHPSDLVTQNFIIGKENN----RKGGETLLSFVKEYAISDRCRQQILCSYFG------- 396
Query: 394 ESQVPPDKCCDNCRHNE 410
++ K CD C E
Sbjct: 397 -EEIKSCKTCDICSEKE 412
>gi|418702081|ref|ZP_13262996.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410758896|gb|EKR25118.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Bataviae str. L1111]
Length = 631
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 198/416 (47%), Gaps = 48/416 (11%)
Query: 31 TCRRKYLLNHFKGSSVTMAESQVPPDKC-----CDNCRQVVYMTPEYVTNNTSFLSRIPR 85
T ++K+ L+ F+ ES + + ++Y P V + TS I
Sbjct: 22 TLKKKWGLSKFRSGQKNAIESLMAGKDTLAILPTGGGKSLIYQFPA-VLDETSLTLVISP 80
Query: 86 IVLIAIDEAHCVSQWG---------HDFRPSYRCLSELRLPLPDVPILFLSR-------- 128
++ + D+ + G D R LS R + IL+LS
Sbjct: 81 LIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILS--RAVTGKIRILYLSPEKALGRQM 138
Query: 129 ---IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVID 182
+P+ L IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI
Sbjct: 139 LEILPKFPLARIAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIK 198
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIY 237
DI SL L++P +I F R NL + Q++I + L NF+ G I+Y
Sbjct: 199 DISDSLGLKNPILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVY 258
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ E V L +NG + YHA + R+ + ++VAT AFGMG+D+
Sbjct: 259 CATRQKVESVYGFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQ 318
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
PDVR VIHY P L +YYQE GRAGRDG S C FY +D I N +
Sbjct: 319 PDVRLVIHYQIPASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----R 374
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ +T++ +++Y CR++ L ++F ++ P K CD C E +E
Sbjct: 375 KGGETLLSHLKEYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 422
>gi|225387692|ref|ZP_03757456.1| hypothetical protein CLOSTASPAR_01462 [Clostridium asparagiforme
DSM 15981]
gi|225046207|gb|EEG56453.1| hypothetical protein CLOSTASPAR_01462 [Clostridium asparagiforme
DSM 15981]
Length = 863
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 165/310 (53%), Gaps = 24/310 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLM 189
+I ++A+DEAHCVSQWG DFRPSY + E LP P++ A TATAT V DDI LM
Sbjct: 129 KIAMVAVDEAHCVSQWGQDFRPSYLKIVEFIERLPVRPVVSAFTATATKEVRDDIIDILM 188
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
LRDP + +TGFDRPNLY +D L L + S IIYC T+ E+VC
Sbjct: 189 LRDPAVASTGFDRPNLYFGVMSPKDKYATLLNYLERHRGE---SGIIYCLTRKNVEEVCM 245
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + G YHA +S +R+ F+ D V+VAT AFGMGIDK +VR V+HY P
Sbjct: 246 RLIKEGFPATRYHAGLSDAERRTNQDDFIYDRSPVMVATNAFGMGIDKSNVRFVVHYNMP 305
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQEHSK 361
K++ +YYQE GRAGRDG + C Y D N + N ++ E + E +
Sbjct: 306 KNMESYYQEAGRAGRDGEPAECILLYGGQDVVTNQTFIEYNQDNRELDPVTKQIVMERDR 365
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC-RHNEMLELEQVP 418
+K++ Y C R Y+L +F + + C C NC E +++ ++
Sbjct: 366 ERLKKMTFYCFTNECLRDYILRYF---------GEYGGNYCGNCGNCLSQFEEVDVTEIA 416
Query: 419 RGGRMVVENS 428
RG VE+S
Sbjct: 417 RGLIGCVESS 426
>gi|340377955|ref|XP_003387494.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Amphimedon
queenslandica]
Length = 906
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 177/316 (56%), Gaps = 40/316 (12%)
Query: 109 RCLSELRLPLPDVPILF--------------LSRIPR---IVLIAIDEAHCVSQWGHDFR 151
+ S+L+L P + +L+ L+R+ R +V IAIDEAHCVS+WGHDFR
Sbjct: 107 KIASQLKLKSPPIKLLYVTPEMVATSNFRETLTRLHRNGGVVFIAIDEAHCVSEWGHDFR 166
Query: 152 PSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP-NIINTGFDRPNLYLAAS 210
P Y L ELR +P VPI+A+TATATP V +D+ SL +R+P ++ + RPNL+ S
Sbjct: 167 PDYLKLGELRGVVPGVPIIALTATATPRVQEDVVRSLKMREPVSVFKSSCFRPNLFYNVS 226
Query: 211 VKQ--DDIMADL-----RKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHA 263
K+ D + DL LT+ + EG IIYC T+ C ++ ++ GI +PYHA
Sbjct: 227 FKETLKDPLKDLCDYITEALTS--STTEGCGIIYCRTREGCGELAGRITSKGILAKPYHA 284
Query: 264 HISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAG 323
+ +R ++ ++K ++ ++VAT +FGMG+DK +VR V+H+ PK + AYYQE GRAG
Sbjct: 285 GLKSNERSQVQEQWMKGVVPIIVATISFGMGVDKANVRFVVHWTLPKGIEAYYQESGRAG 344
Query: 324 RDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI-------------QEHSKTMMKRVEKY 370
RDGL + C +Y D + + Q +++ E +E ++ + + KY
Sbjct: 345 RDGLKAYCRIYYSRFDRDQLLFLLQKEISEKETKKGKSQFKSASRSKEATEKSFETLVKY 404
Query: 371 LELRTCRRKYLLNHFK 386
E CR + +FK
Sbjct: 405 CEEANCRHTVIAQYFK 420
>gi|119510429|ref|ZP_01629563.1| ATP-dependent DNA helicase [Nodularia spumigena CCY9414]
gi|119464958|gb|EAW45861.1| ATP-dependent DNA helicase [Nodularia spumigena CCY9414]
Length = 721
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 165/302 (54%), Gaps = 19/302 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LP D+ + I AIDEAHCVS+WGHDFRP YR L LR PDVP
Sbjct: 119 RLLSERFLPFLDL----VHHQIGISTFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPDVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+A+TATAT V DI L L+ P+I F+R NLY K A++ +L
Sbjct: 175 TIALTATATDRVRGDIIQQLGLKQPSIHLASFNRQNLYYEVRPKTKSAYAEILELIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+ +GSTIIYC T+ +++ L + + YHA +S ++R + F++D ++V+VAT
Sbjct: 232 ETDGSTIIYCLTRKKVDELTFKLQNDKVVALSYHAGLSDEERSKNQTRFIRDDVRVIVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+H+ P++L +YYQE GRAGRD S C F+ +D
Sbjct: 292 IAFGMGINKPDVRLVVHFDLPRNLESYYQESGRAGRDSEPSRCTMFFSFSDIKTIEWSIN 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ E Q +K +++V Y E CRR L +F + P C CDNC
Sbjct: 352 QKADPQE-QLIAKQQLRQVIDYAEGTDCRRTIQLGYF---------GERFPGNCDNCDNC 401
Query: 407 RH 408
R+
Sbjct: 402 RY 403
>gi|423722012|ref|ZP_17696188.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409242714|gb|EKN35474.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 609
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 156/283 (55%), Gaps = 22/283 (7%)
Query: 129 IPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICT 186
+PRI LIAIDEAHC+S WGHDFRP Y LS L+ P VPI+A+TATA + DI
Sbjct: 125 LPRIDISLIAIDEAHCISHWGHDFRPEYTQLSVLKENFPKVPIIALTATADKITRTDILN 184
Query: 187 SLMLRDPNIINTGFDRPNLYLA---ASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
L LRDP + FDRPNL L K++ I A + + Q S IIYC ++
Sbjct: 185 QLKLRDPKTFISSFDRPNLSLTIRRGLSKKEKIAAIVHFINRHHRQ---SGIIYCMSRNS 241
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + + LS I+ YHA +S +R++ F+ D + VV AT AFGMGIDK +VR V
Sbjct: 242 TESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWV 301
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY P + YYQEIGRAGRDG+ S FY D ++ + +S ++ S
Sbjct: 302 IHYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDI----LLLRRFAEESGQKDVSLQK 357
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+ +Y E CRR+ LL++F + DK C NC
Sbjct: 358 LNRMRRYCEADICRRRILLSYFGEET----------DKDCGNC 390
>gi|410075411|ref|XP_003955288.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
gi|372461870|emb|CCF56153.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
Length = 1318
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 164/290 (56%), Gaps = 14/290 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ + +DEAHCVS WGHDFRP Y+ L ++ P +P++A+TATA+ VI DI +L L+
Sbjct: 677 LARVVVDEAHCVSNWGHDFRPDYKELKMFKVEYPTIPMMALTATASKQVIMDIIHNLGLK 736
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCDV 250
+ + F+R NLY K D M ++ + +N+F T IIYC +K CE+V
Sbjct: 737 NEVFLKQSFNRTNLYYEVKKKDKDTMNNICDM--IKNRFRNQTGIIYCHSKNSCEQVSSQ 794
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L R I+ YHA + ++R + + +D I+V+ AT AFGMGIDKPDVR VIHY P+
Sbjct: 795 LQRKNIRCAYYHAGMEPEERSAVQKAWQEDEIQVICATVAFGMGIDKPDVRFVIHYTVPR 854
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRVEK 369
L YYQE GRAGRDG S C T++ D + Q + N D E ++ ++ V
Sbjct: 855 TLEGYYQETGRAGRDGNYSYCVTYFHFKDIRTMQTMIQKDQNLDRENKQKHLNKLQEVMA 914
Query: 370 YLE-LRTCRRKYLLNHFKGSSVTVAESQVPP--DKCCDNCRHNEMLELEQ 416
Y + + CRRK +L++F E P K CDNC++ + LE+
Sbjct: 915 YCDNITDCRRKLVLSYFN-------EDFNPALCAKNCDNCKNRSNITLEK 957
>gi|359441917|ref|ZP_09231801.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20429]
gi|358036178|dbj|GAA68050.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20429]
Length = 596
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 122 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L ++Q S IIYC ++
Sbjct: 182 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQ---SGIIYCTSRK 238
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + ++ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 239 RVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 298
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + +YYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 299 VLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 357
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 358 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 394
>gi|229496706|ref|ZP_04390420.1| ATP-dependent DNA helicase RecQ [Porphyromonas endodontalis ATCC
35406]
gi|229316603|gb|EEN82522.1| ATP-dependent DNA helicase RecQ [Porphyromonas endodontalis ATCC
35406]
Length = 724
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 156/288 (54%), Gaps = 23/288 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDV----PILAVTATATPVV 180
FL I I AIDEAHC+S+WGHDFRP YR + P+ DV PI+A+TATATP V
Sbjct: 129 FLQSIS-ISFFAIDEAHCISEWGHDFRPEYRKIR----PMIDVIGRRPIIALTATATPKV 183
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPT 240
DI +L + +I + F+RPNL+ + K +D+ ++ + Q G I+YC +
Sbjct: 184 EHDILRTLQIPQAHIFRSSFNRPNLFYSILPKNEDVDRNIVRFVLSNPQKSG--IVYCMS 241
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ +L NGI+ PYHA + ++R F+ + +V+VAT AFGMGIDKPDV
Sbjct: 242 RSKVTTFAKILRINGIRALPYHAGLDAQERAANQDAFLSEECQVIVATIAFGMGIDKPDV 301
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIHY PK L YYQE GRAGRDG VC +Y +D + Q N +E
Sbjct: 302 RFVIHYDMPKSLEGYYQETGRAGRDGGEGVCIAYYSQSDMQRLEKFMQDKSNSE--REIG 359
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
K ++ Y E CRRK LL++F + + C CDNC
Sbjct: 360 KQLLAETSNYAESALCRRKLLLHYFG--------EEYREENCGNCDNC 399
>gi|225010696|ref|ZP_03701166.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
gi|225005249|gb|EEG43201.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
Length = 647
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 157/268 (58%), Gaps = 14/268 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVV 180
+ FL+ + + +A+DEAHC+S+WGHDFRP YR L + R+ ++PI+ +TATATP V
Sbjct: 130 VAFLNTVT-VSFVAVDEAHCISEWGHDFRPEYRNLQRIIDRVG-ANIPIIGLTATATPKV 187
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCP 239
+DI +L + D + + F+RPNL+ K ++ AD+ + F Q G S IIYC
Sbjct: 188 QEDIIKNLGITDATVFKSSFNRPNLFYEVRPKTQNVEADIIR---FVKQHVGKSGIIYCL 244
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ +L NG+ PYHA K R + +F+ + + VVVAT AFGMGIDKPD
Sbjct: 245 SRKKVEELAQILQVNGVSAVPYHAGFDTKTRSKYQDMFLMEEVDVVVATIAFGMGIDKPD 304
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQ 357
VR VIH+ PK + +YYQE GRAGRDG C FY D K M +P Q
Sbjct: 305 VRYVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMAGKPVAE----Q 360
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHF 385
E +++ + + E RRK++L++F
Sbjct: 361 EIGNALLQEIVGFAETSISRRKFILHYF 388
>gi|395804511|ref|ZP_10483749.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395433398|gb|EJF99353.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 768
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 157/276 (56%), Gaps = 19/276 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S WGHDFRP+Y L L+ P PILA+TATA DI L L+
Sbjct: 131 ISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPILALTATADKATRTDISKQLNLK 190
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDV 250
+P FDR NL L D + +++ +F EN+ S IIYC ++ E++ +
Sbjct: 191 NPKTFIASFDRKNLSLEVRPALDRV----KQIIDFIENKPNESGIIYCLSRKATEELAEK 246
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L +NGI+ + YHA + + R + F+ D +VV AT AFGMGIDK +VR VIHY PK
Sbjct: 247 LRKNGIEAKAYHAGLDNETRAKTQDQFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPK 306
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ YYQEIGRAGRDGL + F AD + LN S+IQ + R+++Y
Sbjct: 307 NIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASEGLN-SDIQ---LAKLDRMKQY 362
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ +CRRK LL++F G VT + C NC
Sbjct: 363 ADAVSCRRKILLSYF-GELVT---------ENCGNC 388
>gi|338212508|ref|YP_004656563.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
gi|336306329|gb|AEI49431.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
Length = 746
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 160/283 (56%), Gaps = 13/283 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDD 183
FL R I +A+DEAHC+S+WGHDFRP YR + + + PD+P++A+TATATP V D
Sbjct: 133 FLQR-ANISFVAVDEAHCISEWGHDFRPEYRRIRGIIDNINPDLPLIALTATATPKVQQD 191
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +L + + + T F+R NLY K D+ L K +N S IIYC ++
Sbjct: 192 IVKNLRMEEAAMFKTSFNRKNLYYEIRPKLADVNKQLIKY--IKNNKGKSGIIYCLSRKT 249
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+V ++L+ N ++ PYHA + R F+ + V+VAT AFGMGIDKPDVR V
Sbjct: 250 VEEVANLLNVNDVKALPYHAGLDSSTRMHNQDAFLNEEADVIVATIAFGMGIDKPDVRFV 309
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY APK L YYQE GRAGRDGL C FY D K F + + +E +++++ +
Sbjct: 310 IHYDAPKSLEGYYQETGRAGRDGLEGNCVMFYCIDDIQKLEK-FNKDKSVTE-RDNARHL 367
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + Y L CRR+ LL++F E CDNC
Sbjct: 368 LNEMVAYANLGACRRRQLLSYF-------GEYMEKDCGFCDNC 403
>gi|423345823|ref|ZP_17323512.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409221558|gb|EKN14507.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 609
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 156/283 (55%), Gaps = 22/283 (7%)
Query: 129 IPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICT 186
+PRI LIAIDEAHC+S WGHDFRP Y LS L+ P VPI+A+TATA + DI
Sbjct: 125 LPRIDISLIAIDEAHCISHWGHDFRPEYTQLSVLKENFPKVPIIALTATADKITRTDILN 184
Query: 187 SLMLRDPNIINTGFDRPNLYLA---ASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
L LRDP + FDRPNL L K++ I A + + Q S IIYC ++
Sbjct: 185 QLKLRDPKTFISSFDRPNLSLTIRRGLSKKEKIAAIVHFINRHHRQ---SGIIYCMSRNS 241
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + + LS I+ YHA +S +R++ F+ D + VV AT AFGMGIDK +VR V
Sbjct: 242 TESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWV 301
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY P + YYQEIGRAGRDG+ S FY D ++ + +S ++ S
Sbjct: 302 IHYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDI----LLLRRFAEESGQKDVSLQK 357
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+ +Y E CRR+ LL++F + DK C NC
Sbjct: 358 LNRMRRYCEADICRRRILLSYFGEET----------DKDCGNC 390
>gi|374628883|ref|ZP_09701268.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
gi|373906996|gb|EHQ35100.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
Length = 720
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 160/283 (56%), Gaps = 15/283 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L + +I L A+DEAHC+SQWGH+FRP YR L ++ P VP++A+TATA P V DDI
Sbjct: 122 LLKSAKISLFAVDEAHCISQWGHEFRPEYRQLGLIKREFPGVPVIALTATANPAVRDDIL 181
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L+DP + F R NL K+D + L + + + S IIYC ++ E
Sbjct: 182 RQLKLKDPFVQIGSFRRSNLNYEVREKEDTLGQILSYIRGKKGE---SGIIYCSSRNSVE 238
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ L+ GI + PYHA +S +R + F+K + +VVAT AFGMGI+KPDVR V+H
Sbjct: 239 ILTKKLNSYGIYSLPYHAGLSKDERAKTQEKFIKGEVFLVVATVAFGMGINKPDVRYVLH 298
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y P +L YYQE GRAGRDG SS C FY D K F + ++ + ++ +
Sbjct: 299 YDLPPNLERYYQETGRAGRDGKSSDCILFYSRGDRIKAEY-FIGRMQSAKQKRIAREKLD 357
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ ++ E CR Y+L +F G +VT ++C CDNC
Sbjct: 358 EMTEFCESDRCRVSYMLKYF-GEAVT--------ERCGRCDNC 391
>gi|359434605|ref|ZP_09224868.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
gi|357918814|dbj|GAA61117.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
Length = 607
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L ++Q S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + ++ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + +YYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|392533361|ref|ZP_10280498.1| ATP-dependent DNA helicase [Pseudoalteromonas arctica A 37-1-2]
Length = 607
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 163/284 (57%), Gaps = 13/284 (4%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ + L AIDEAHCVS WGHDFRP Y L+EL+ VP++A+TATA
Sbjct: 133 FLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTATADKATRF 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K ++ LR L ++Q S IIYC ++
Sbjct: 193 DIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQ---SGIIYCTSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + ++ G+ YHA +S +QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + +YYQE GRAGRDGL++ ++ AD + F+ +++D + + +
Sbjct: 310 VLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFE-DIDDEQRRRVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 369 RFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 405
>gi|340618927|ref|YP_004737380.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
gi|339733724|emb|CAZ97101.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
Length = 736
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 154/265 (58%), Gaps = 8/265 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVV 180
I FL + ++ IA+DEAHC+S+WGHDFRP YR L + RL D+PI+A+TATATP V
Sbjct: 135 IDFLQSV-KLSFIAVDEAHCISEWGHDFRPEYRNLRTIVNRLD-DDIPIIALTATATPKV 192
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPT 240
+DI +L + D F+RPNL+ K ++ +D+ + + S IIYC +
Sbjct: 193 QEDIIKNLGITDAQTYKASFNRPNLFYEVRPKTANVDSDIIRFV--KKNAGKSGIIYCLS 250
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ VL NG+ PYHA K R + +F+ + + VVVAT AFGMGIDKPDV
Sbjct: 251 RKRVEELAQVLQVNGVSAVPYHAGFDAKTRSKYQDMFLMEDVDVVVATIAFGMGIDKPDV 310
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIH+ PK + +YYQE GRAGRD C FY D K F N +E QE
Sbjct: 311 RFVIHHDIPKSIESYYQETGRAGRDDGEGHCLAFYSYKDIEKLEK-FMSNKPVAE-QEIG 368
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK++L++F
Sbjct: 369 NALLQEVVAYAETSMSRRKFMLHYF 393
>gi|258647142|ref|ZP_05734611.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
gi|260853106|gb|EEX72975.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
Length = 726
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 155/287 (54%), Gaps = 17/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI
Sbjct: 131 FLQSV-KISFYAIDEAHCISEWGHDFRPEYRKIRPIIDEIGRAPIIALTATATDKVRLDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + + F+RPNLY K DI D+ +T + S IIYC ++
Sbjct: 190 KKNLGILNAKEFKSSFNRPNLYYEVRSKTKDIDKDI--ITYIHHNKGKSGIIYCLSRKKV 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ +VL N I+ YHA + + R + F+ + I ++VAT AFGMGIDKPDVR VI
Sbjct: 248 EELAEVLRANNIKAAAYHAGMDPQTRSQTQDDFLMESIDIIVATIAFGMGIDKPDVRFVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSKTM 363
HY PK L YYQE GRAGRDG VC FY D K + L + EI + +
Sbjct: 308 HYDIPKSLEGYYQETGRAGRDGGEGVCLAFYSPDDLKKLEKFMEGKPLAEQEI---GRLL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+K Y E CRRK LL++F + C CDNC H
Sbjct: 365 LKETAAYAESSVCRRKMLLHYFG--------EDYKKENCGNCDNCLH 403
>gi|288803880|ref|ZP_06409305.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
gi|288333645|gb|EFC72095.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
Length = 727
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 155/287 (54%), Gaps = 15/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI
Sbjct: 131 FLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRCAIETIGTAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K+ D + +++ F Q G S IIYC ++
Sbjct: 190 VRSLGIEDCAEFKSSFNRPNLYYEVRPKKSDDDTN-KQIIKFIKQHTGKSGIIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ PYHA + + R + F+ + + ++VAT AFGMGIDKPDVR V
Sbjct: 249 VEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDIIVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 309 IHYDIPKSLEGYYQETGRAGRDGEEGICIVFYSKKDLNKLEKFMEGKPVAE--QDIGRQL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ E Y E CRRK LL++F P C CDNC H
Sbjct: 367 LQETEAYAESSVCRRKMLLHYFG--------EDYPKCNCAMCDNCLH 405
>gi|355672902|ref|ZP_09058623.1| hypothetical protein HMPREF9469_01660 [Clostridium citroniae
WAL-17108]
gi|354814929|gb|EHE99527.1| hypothetical protein HMPREF9469_01660 [Clostridium citroniae
WAL-17108]
Length = 787
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 152/266 (57%), Gaps = 14/266 (5%)
Query: 130 PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSL 188
+I ++A+DE+HCVSQWG DFRPSY + + LP P++ A TATAT V +DI L
Sbjct: 128 AKITMVAVDESHCVSQWGQDFRPSYLKIVDFIKKLPKRPVVSAFTATATKEVREDIIDIL 187
Query: 189 MLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKV 247
ML+DP ++ TG+DRPNLYL +D A L NF G IIYC T+ + E+V
Sbjct: 188 MLQDPVVVTTGYDRPNLYLGVQSPKDKYAA----LKNFVEIHPGQCGIIYCLTRKLVEEV 243
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
D L +GI YHA +S K+R++ F+ D +V+VAT AFGMGIDK +VR VIHY
Sbjct: 244 SDRLRADGISVTRYHAGLSDKERRQNQDDFIYDRCQVMVATNAFGMGIDKSNVRYVIHYN 303
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQEH 359
PK + A+YQEIGR RD C FY D N + N ++ E +QE
Sbjct: 304 MPKSIEAFYQEIGRCSRDQEPGECILFYSGQDVVTNQLFIDNNQDNQELDPLTRQIVQER 363
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+ ++++ Y C R Y+L +F
Sbjct: 364 DRDRLRKMTFYCFTNECLRDYILRYF 389
>gi|229827995|ref|ZP_04454064.1| hypothetical protein GCWU000342_00044 [Shuttleworthia satelles DSM
14600]
gi|229792589|gb|EEP28703.1| hypothetical protein GCWU000342_00044 [Shuttleworthia satelles DSM
14600]
Length = 579
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 161/288 (55%), Gaps = 23/288 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV-TATATPVVIDDICTSLML 190
I LIA+DEAHC+SQWG DFRPSY + + LP P++A TATAT V +DI +L L
Sbjct: 131 ISLIAVDEAHCISQWGQDFRPSYLRIRDFANSLPRRPVVAAFTATATRRVREDIAKNLQL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
R+P ++ TGFDRPNL+ A ++ + + LT + E S IIYC T+ E+V +
Sbjct: 191 REPRLLVTGFDRPNLFFAVGHPENKLAWLVEDLTRHK---EESAIIYCSTRKKVEEVYEA 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + GI YHA + ++R + F+ D ++++VAT AFGMGIDKPDVR VIHY P+
Sbjct: 248 LRQEGISVGRYHAGMEPEERAKSQEDFITDRVQMIVATNAFGMGIDKPDVRRVIHYNMPQ 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ-----PNLNDSEI---QEHSKT 362
+ YYQE GRAGRDG + D+ + + ++D++I Q+ +
Sbjct: 308 SMENYYQEAGRAGRDGEEAEAILLADAQDYVIARYLLEHKEYPEGMSDADILMAQDQDRE 367
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ +E Y C R Y+L +F + P C C +CRH
Sbjct: 368 RLRAMEGYTRTTGCLRSYILRYF---------GEKPSGDCKKCSSCRH 406
>gi|345509360|ref|ZP_08788959.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|345454812|gb|EEO52054.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
Length = 602
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 161/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 120 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 180 VRQLHLNHPRTFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL----ILLTKFASESNQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 392
>gi|434406622|ref|YP_007149507.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
gi|428260877|gb|AFZ26827.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
Length = 723
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 163/300 (54%), Gaps = 19/300 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE LPL D L +I I AIDEAHCVS+WGHDFRP YR + LR PDVP
Sbjct: 119 RLLSERFLPLLD---LVKEKIG-ISTFAIDEAHCVSEWGHDFRPEYRQMKSLRKRYPDVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
LA+TATAT V DI L L+ P+I F+R NLY K A+L + EN
Sbjct: 175 TLALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRTKTKTAYAELLGIIR-EN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
Q GS IIYC T+ +++ L + I YHA ++ +R + F++D ++V+VAT
Sbjct: 234 Q--GSGIIYCLTRKKVDELTLKLQHDKISVLSYHAGLTDDERSKNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIHY P++L +YYQE GRAGRD S C F+ +D
Sbjct: 292 IAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAGRDDEPSRCTLFFSFSDIKTIEWSIN 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
D + Q SK +++V Y E CRR L +F + P C CDNC
Sbjct: 352 QK-TDPQEQLISKQQLRQVIDYAEGTDCRRTIQLGYF---------GERFPGNCGNCDNC 401
>gi|326336566|ref|ZP_08202735.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691231|gb|EGD33201.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 730
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 159/266 (59%), Gaps = 14/266 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVID 182
FL I I +A+DEAHC+S+WGHDFRP YR + + RL ++PI+A+TATAT V +
Sbjct: 133 FLKTI-NISFVAVDEAHCISEWGHDFRPEYRNIKAIIDRLG-NNIPIIALTATATTKVQE 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + + + + F+RPNLY K +I +D+ + F Q G S IIYC ++
Sbjct: 191 DILKNLGIPEALVFKSSFNRPNLYYEVRPKTKNINSDIIR---FVKQHPGQSGIIYCLSR 247
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ L NGI PYHA + K R + +F+ + ++VVVAT AFGMGIDKPDVR
Sbjct: 248 KSVEELAQTLQVNGITAIPYHAGLDAKTRAKHQDMFLMEEVEVVVATIAFGMGIDKPDVR 307
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEH 359
VIHY PK + +YYQE GRAGRDG C FY D K M+ +P QE
Sbjct: 308 FVIHYDIPKSIESYYQETGRAGRDGGEGYCLAFYCYKDIEKLEKFMVGKPIAE----QEV 363
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHF 385
+ +++ + Y E T RRK++L++F
Sbjct: 364 GQALLQDMVAYAETSTSRRKFILHYF 389
>gi|39996003|ref|NP_951954.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
gi|39982768|gb|AAR34227.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
Length = 603
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 155/282 (54%), Gaps = 14/282 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L IP I L AIDEAHCVSQWGHDFRP Y L LR P VP++A+TATA DI
Sbjct: 127 LREIP-IALFAIDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQTRGDIV 185
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVIC 244
T L LRD + TGFDRPN+ + KQ R+L F + + I+YC ++
Sbjct: 186 TRLGLRDAEMFVTGFDRPNIRYSVLEKQKP----FRQLEEFLATRPREAGIVYCLSRKRV 241
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E+V + L G++ YHA ++ +R + F++D I+VVVAT AFGMGIDKP+VR V+
Sbjct: 242 EEVAEKLRAAGVEAGAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFVV 301
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK++ +YYQE GRAGRDGL + + D + + + N +++ +
Sbjct: 302 HYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKLN 361
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
V + E CRR+ LL +F E P CD C
Sbjct: 362 AMV-GFAEALVCRRRALLGYF-------GERLEEPCGNCDLC 395
>gi|409911451|ref|YP_006889916.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens KN400]
gi|298505021|gb|ADI83744.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens KN400]
Length = 603
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 155/282 (54%), Gaps = 14/282 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L IP I L AIDEAHCVSQWGHDFRP Y L LR P VP++A+TATA DI
Sbjct: 127 LREIP-IALFAIDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQTRGDIV 185
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVIC 244
T L LRD + TGFDRPN+ + KQ R+L F + + I+YC ++
Sbjct: 186 TRLGLRDAEMFVTGFDRPNIRYSVLEKQKP----FRQLEEFLATRPREAGIVYCLSRKRV 241
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E+V + L G++ YHA ++ +R + F++D I+VVVAT AFGMGIDKP+VR V+
Sbjct: 242 EEVAEKLRAAGVEAAAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFVV 301
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK++ +YYQE GRAGRDGL + + D + + + N +++ +
Sbjct: 302 HYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKLN 361
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
V + E CRR+ LL +F E P CD C
Sbjct: 362 AMV-GFAEALVCRRRALLGYF-------GERLEEPCGNCDLC 395
>gi|302345889|ref|YP_003814242.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
gi|302148973|gb|ADK95235.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
Length = 727
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 155/287 (54%), Gaps = 15/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI
Sbjct: 131 FLKSV-KISFYAIDEAHCISEWGHDFRPEYRKIRCAIETIGTAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+RPNLY K+ D + +++ F Q G S IIYC ++
Sbjct: 190 VRSLGIEDCAEFKSSFNRPNLYYEVRPKKSDDDTN-KQIIKFIKQHTGKSGIIYCLSRKK 248
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ PYHA + + R + F+ + + ++VAT AFGMGIDKPDVR V
Sbjct: 249 VEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDIIVATIAFGMGIDKPDVRFV 308
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG +C FY D K + Q+ + +
Sbjct: 309 IHYDIPKSLEGYYQETGRAGRDGEEGICVVFYSKKDLNKLEKFMEGKPVAE--QDIGRQL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ E Y E CRRK LL++F P C CDNC H
Sbjct: 367 LQETEAYAESSVCRRKMLLHYFG--------EDYPKCNCAMCDNCLH 405
>gi|91772141|ref|YP_564833.1| ATP-dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
gi|91711156|gb|ABE51083.1| ATP dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
Length = 647
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 159/277 (57%), Gaps = 14/277 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L AIDEAHC+S+WGHDFRP YR + L+ PDVP++A+TATAT V ++ L L
Sbjct: 128 VSLFAIDEAHCISEWGHDFRPEYRRMGFLKKKYPDVPVIALTATATAKVKENTIKQLDLV 187
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P++ FDR NL K ++ D+ ++ + Q S IIYC ++ E V L
Sbjct: 188 SPSVYVASFDRANLSYEIRPK-NNTYGDM--VSYLKGQRGNSGIIYCNSRKSVESVSTKL 244
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+R G PYHA ++ +R++ F++D + ++VAT AFGMGIDKP+VR VIHY PK+
Sbjct: 245 NREGFHALPYHAGLNDAKRQDNQERFIRDDVDIIVATVAFGMGIDKPNVRFVIHYDLPKN 304
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQE GR GRDGL C ++ AD+ K + SE ++ + T ++ + Y
Sbjct: 305 LEGYYQETGRGGRDGLECDCILYFSRADWYKIKYLIDQKPKKSE-RDIAMTKLQEMIDYC 363
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
E +CRRK LL++F ++ D C CD C
Sbjct: 364 ESTSCRRKALLHYFG--------EELESDNCGSCDVC 392
>gi|262409277|ref|ZP_06085820.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|262352729|gb|EEZ01826.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
Length = 608
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 161/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 126 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 186 VRQLHLNHPRTFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRS 243
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 244 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 303
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 304 VIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL----ILLTKFASESNQQNINLE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 360 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 398
>gi|294010153|ref|YP_003543613.1| ATP-dependent DNA helicase RecQ [Sphingobium japonicum UT26S]
gi|292673483|dbj|BAI95001.1| ATP-dependent DNA helicase RecQ [Sphingobium japonicum UT26S]
Length = 590
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R +I L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DDI
Sbjct: 124 LLRAAKIALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADHHTRDDIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + +I GFDRPN+ A V D +A R+L++ G I+Y PT+ E
Sbjct: 184 VQLGIPREGLIIAGFDRPNIRYA--VHPRDGLA--RQLSDLIAGQTGPGIVYAPTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ + L + G R YHA + + R F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAETLGKTGRPTRAYHAGLDPRTRAANQAAFIASEDMVMVATIAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
PK + YYQE GRAGRDG + + F+ DF + D Q+ + +
Sbjct: 300 AALPKSIEGYYQESGRAGRDGEPAEAHLFWGADDFARARQRI--GELDPLRQQGERARIT 357
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ +E TCRR LL HF E+ P CDNC
Sbjct: 358 ALGGLVETGTCRRAILLRHF-------GENPSPTCGNCDNC 391
>gi|167540323|ref|XP_001741831.1| ATP-dependent DNA helicase recQ [Entamoeba dispar SAW760]
gi|165893416|gb|EDR21673.1| ATP-dependent DNA helicase recQ, putative [Entamoeba dispar SAW760]
Length = 508
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 21/285 (7%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L I ++ + A+DEAHC+SQWGHDFRPSY LS L+ PD+PI+A+TATATP V +DI
Sbjct: 151 LYSIKKLGMFAVDEAHCISQWGHDFRPSYLELSYLKKTYPDIPIIALTATATPKVKEDII 210
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVIC 244
SL L++P I + FDRPN+Y + +D ++ LT +Q E IIYC T++ C
Sbjct: 211 KSLELKNPKIFTSSFDRPNIYFKV-IYKDLYETPIQILTQILHQHEKEGGIIYCSTRMEC 269
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + +S NG YHA + ++R+ I + + VVVAT AFGMGID+ DVR VI
Sbjct: 270 ELIEKYISTNGYPVAKYHAGMKSEERETIQKKWENGEVNVVVATIAFGMGIDRGDVRFVI 329
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+ PK + + QE GRAGRDG + + DF + + N SE+
Sbjct: 330 HWNIPKTIEGFMQEAGRAGRDGKPAESIILFSNDDFEREVAL---NQETSEV-------- 378
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
+ + +CRRK LL +F +S P +CCD C N
Sbjct: 379 --IRELCVECSCRRKCLLKYFGETSFK------PNKRCCDLCNEN 415
>gi|284040794|ref|YP_003390724.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283820087|gb|ADB41925.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 736
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 157/285 (55%), Gaps = 19/285 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + I +AIDEAHC+S+WGHDFRP YR + + + ++P++A+TATATP V DI
Sbjct: 133 FLKK-ANISFVAIDEAHCISEWGHDFRPEYRKIRGIVDNIGNLPVIALTATATPKVQQDI 191
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D N+ T F+R NLY K D ++L + Q +G S IIYC ++
Sbjct: 192 QKNLQMEDANLYKTSFNRKNLYYEIRPKVDA----KKQLIKYIKQNKGKSGIIYCLSRKT 247
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ ++L N ++ PYHA + R F+ + + V+ AT AFGMGIDKPDVR V
Sbjct: 248 VEEIAELLRVNDVKALPYHAGLDPVTRMNNQDAFLNEDVDVICATIAFGMGIDKPDVRFV 307
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE--HSK 361
IHY APK L YYQE GRAGRDGL C FY D K + D + E ++K
Sbjct: 308 IHYDAPKSLEGYYQETGRAGRDGLEGNCLMFYSFDDIVK----LEKFNKDKPVTERDNAK 363
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ + Y L CRR+ LL +F E CDNC
Sbjct: 364 HLLTEMVSYANLGVCRRRQLLGYF-------GEFMEKDCGFCDNC 401
>gi|294644712|ref|ZP_06722461.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294805927|ref|ZP_06764794.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|292639975|gb|EFF58244.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294446809|gb|EFG15409.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
Length = 621
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 161/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 139 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQIPIVALTATADKITREDI 198
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K + F ++ G S IIYC ++
Sbjct: 199 VRQLHLNHPRTFISSFDRPNISL--TVKRGFQAKEKNKAILEFIHRHGGESGIIYCMSRS 256
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 257 KTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 316
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q +
Sbjct: 317 VIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL----ILLTKFASESNQQNINLE 372
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 373 KLQRMQQYAEADICRRRILLSYF-------GETTTEDCGNCDVCKN 411
>gi|85818249|gb|EAQ39409.1| ATP-dependent DNA helicase RecQ [Dokdonia donghaensis MED134]
Length = 701
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 150/257 (58%), Gaps = 11/257 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIAIDEAHC+S WGHDFRP+Y L L+ P+ P++A+TATA DDI L +
Sbjct: 136 KISLIAIDEAHCISSWGHDFRPAYTQLGYLKRRYPETPLVALTATADRSTQDDIAQQLSI 195
Query: 191 RDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVC 248
+ FDRPNLYL K+++ + D + FE S IIYC ++ E +
Sbjct: 196 PQAKKYISSFDRPNLYLDVRPGQKRNEQILDFLEDHPFE-----SGIIYCLSRKSTENLA 250
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L NG YHA +S +QR ++ F+ D ++ AT AFGMGIDK +VR VIHY
Sbjct: 251 AKLKSNGHNAAAYHAGMSAEQRSKVQEDFINDTTPIICATIAFGMGIDKSNVRWVIHYNM 310
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK+L YYQEIGRAGRDGL S FY AD M + ++ ++ ++ + R++
Sbjct: 311 PKNLEGYYQEIGRAGRDGLPSHTVLFYSYAD----TMQLRQFIDGAKNADYQMAKLDRMQ 366
Query: 369 KYLELRTCRRKYLLNHF 385
+Y E +CRRK L+N+F
Sbjct: 367 QYAEALSCRRKVLINYF 383
>gi|331085484|ref|ZP_08334569.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407722|gb|EGG87220.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 617
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 156/273 (57%), Gaps = 14/273 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVI 181
L +R I ++++DEAHCVSQWG DFRPSY ++E L P+L A TATAT V
Sbjct: 125 FLGFAREAEISMVSVDEAHCVSQWGQDFRPSYLKIAEFFNYLGTRPVLSAFTATATAEVK 184
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPT 240
+DI L LRDP +I TGFDR NL +D A +T + + EG IIYC T
Sbjct: 185 EDIIALLNLRDPAMITTGFDRVNLRFCVEHPRDKFAA----VTAYLREHEGEGGIIYCLT 240
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ + E+VC+ L + G++ YHA + ++R+ F+ D +++VAT AFGMGIDK +V
Sbjct: 241 RKVVEEVCEKLIKEGLEVTRYHAGLGDEERRRNQEDFIYDRKQIMVATNAFGMGIDKSNV 300
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE----- 355
R VIHY PK++ +YYQE GRAGRDG+SS C Y D N + SE
Sbjct: 301 RFVIHYNMPKNMESYYQEAGRAGRDGMSSECILLYSGQDVITNQFFIEQAGEQSEFDPET 360
Query: 356 ---IQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
I+E + ++++ Y C R+Y+L +F
Sbjct: 361 AELIRERERDRLQKMTYYCFTNECLREYMLRYF 393
>gi|218130244|ref|ZP_03459048.1| hypothetical protein BACEGG_01832 [Bacteroides eggerthii DSM 20697]
gi|217987528|gb|EEC53856.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 604
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 158/269 (58%), Gaps = 9/269 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R + L AIDEAHC+SQWGHDFRP Y + L P VP++A+TATA + +DI
Sbjct: 120 YLLRDMHVSLFAIDEAHCISQWGHDFRPEYAQMGILHQQFPQVPVIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P I + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IKQLHLNHPRIFISSFDRPNLSL--TVKRGYQQKEKSKAIIDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S +R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKQGIRAAVYHAGLSPTRRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDG+ S FY +D ++ DS Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLSDL----ILLTKFATDSGQQSINIE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVT 391
++R+++Y E CRR+ LL++F G + T
Sbjct: 354 KLQRMQQYAESDICRRRILLSYF-GETAT 381
>gi|260909474|ref|ZP_05916178.1| ATP-dependent helicase RecQ [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636399|gb|EEX54385.1| ATP-dependent helicase RecQ [Prevotella sp. oral taxon 472 str.
F0295]
Length = 725
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 157/292 (53%), Gaps = 17/292 (5%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL I ++ A+DEAHC+S+WGHDFRP YR + + P++A+TATAT
Sbjct: 126 DENVEFLQSI-KVSFYAVDEAHCISEWGHDFRPEYRNIRPTISRIGQAPVIALTATATDK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + + + F+RPNLY K ++ R + F Q G S IIYC
Sbjct: 185 VRSDIKKNLGIGEALEFKSSFNRPNLYYEVRSKTQEVD---RNIIMFIKQHAGKSGIIYC 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E++ +L N I+ PYHA + R + F+ + I V+VAT AFGMGIDKP
Sbjct: 242 LSRKKVEELSAILKANNIKAEPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG +C TFY D K F SE Q+
Sbjct: 302 DVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCITFYSNKDLQKLEK-FMEGKPVSE-QD 359
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ ++ Y E CRRK LL++F G T D C CDNC H
Sbjct: 360 IGRQLLLETAAYAESSVCRRKMLLHYF-GEEYT-------EDNCHNCDNCLH 403
>gi|423298844|ref|ZP_17276869.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|408474193|gb|EKJ92712.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 601
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 161/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K + + + S IIYC ++
Sbjct: 180 IRQLHLIRPRTFISSFDRPNISL--TVKRGFQAKEKNKAIIEFIQRHGKESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLLKQGIRCGVYHAGLSAQQRDETQDDFINDRIQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q+ +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFASESSQQKINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETATEDCGNCDVCKN 392
>gi|149371063|ref|ZP_01890658.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
gi|149355849|gb|EDM44407.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
Length = 697
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 156/283 (55%), Gaps = 15/283 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS+I I LIA+DEAHC+S WGHDFRP+Y LS L+ P PI+A+TATA DDI
Sbjct: 129 LSKI-EINLIAVDEAHCISSWGHDFRPAYTQLSRLKQEFPGTPIIALTATADRATQDDIL 187
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + + + FDRPN+YL Q+ I + L++ Q S IIYC ++ E
Sbjct: 188 DQLKISNAKRFVSSFDRPNIYLDVRPGQNRINHIYKFLSSRGLQ---SGIIYCLSRKSTE 244
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ L G YHA +S + R +I F+ D ++VAT AFGMGIDK +VR VIH
Sbjct: 245 SITAKLKTKGYDAAAYHAGLSAEDRSQIQEDFINDRTPIIVATIAFGMGIDKSNVRWVIH 304
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ YYQEIGR GRDGL + FY AD ++ + + QE ++
Sbjct: 305 YNMPKNIEGYYQEIGRGGRDGLKARALMFYSYADV----LMLRKFAEGTPTQEFQLAKLE 360
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
R++++ E CRRK LL++F E + CD C++
Sbjct: 361 RMQQFSESLNCRRKALLSYF-------GEQLIEDCGNCDICKN 396
>gi|325103763|ref|YP_004273417.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
gi|324972611|gb|ADY51595.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
Length = 728
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 164/288 (56%), Gaps = 16/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
I FL + + +A+DEAHC+S+WGHDFRP YR + ++ + D+PI+A+TATATP V
Sbjct: 129 IDFLKSVT-VSFVAVDEAHCISEWGHDFRPEYRKIRQVVNNIREDIPIIALTATATPKVQ 187
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L + + N+ + F+R NL+ K ++ D+ K +N S I+YC ++
Sbjct: 188 TDIQKNLGMMNANVFKSSFNRGNLFYEVRPK-GNVFKDIIKY--IKNNPGKSGIVYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V + L NGI++ PYHA + K R + F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 245 KKVEEVANALEINGIRSLPYHAGLDAKVRADTQDKFLMEEVDVIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH-- 359
VIH+ PK + YYQE GRAGRDG C FY D K + D + E
Sbjct: 305 YVIHHDIPKSMEGYYQETGRAGRDGGEGYCIAFYSEKDVDK----LAKFMKDKPVSEREI 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++K V Y E CRRK +L++F G + ++ + CDNCR
Sbjct: 361 GTQILKEVIDYSESAVCRRKQILHYF-GENF----NEAGCGEMCDNCR 403
>gi|313885824|ref|ZP_07819567.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924728|gb|EFR35494.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica
PR426713P-I]
Length = 733
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 154/286 (53%), Gaps = 18/286 (6%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATATP V DI +
Sbjct: 131 RQVKISFFAIDEAHCISEWGHDFRPEYRKIRPVVDEIGRRPIIALTATATPKVEHDIRKN 190
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L + + I + F+RPNLY + K +D+ A R + + S IIYC ++ +
Sbjct: 191 LGILEGRIFKSSFNRPNLYYSVEKKGEDVNA--RIIRFIRKRPNKSGIIYCMSREKVMNL 248
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+L NGI+ PYHA + K+R F+ + +V+VAT AFGMGIDKPDVR VIHY
Sbjct: 249 SKLLQMNGIKALPYHAGLDAKERSANQDAFLSEECRVIVATIAFGMGIDKPDVRYVIHYD 308
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMK 365
PK L YYQE GRAGRDG C FY D K N M +P QE + ++
Sbjct: 309 MPKSLEGYYQETGRAGRDGGEGYCLAFYNEKDIQKLENFMQGKPIAE----QEIGRQLLA 364
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHN 409
+ + CRR YLL +F + + C CDNC N
Sbjct: 365 KTSTFALTPMCRRAYLLYYFG--------ERYDQENCGACDNCAKN 402
>gi|423223965|ref|ZP_17210433.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|392637198|gb|EIY31072.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 611
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 162/286 (56%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + + P++P++A+TATA + +DI
Sbjct: 129 YLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMGFIHEMFPNIPVIALTATADKITREDI 188
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 189 VRQLHLNQPKVFISSFDRPNLSL--TVKRGYQQKEKSKAILDFIGRHRGESGIIYCMSRS 246
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + G + YHA +S +R E F+ D +++V AT AFGMGIDK +VR
Sbjct: 247 KTETVAQMLQKQGFRAAVYHAGLSSARRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRW 306
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 307 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATESGQQGINLE 362
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 363 KLQRMQQYAEADVCRRRILLSYF-------GEATTEDCGNCDVCKN 401
>gi|332667951|ref|YP_004450739.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332336765|gb|AEE53866.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 713
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 155/281 (55%), Gaps = 17/281 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I L AIDEAHC+S WGHDFRP Y + L+ P VP++A+TATA + DI L L
Sbjct: 132 KINLFAIDEAHCISAWGHDFRPEYTQMGMLKQHFPQVPVIALTATADKLTRKDIVDQLKL 191
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
+P I FDRPNL L Q L ++ F + + + IIYC ++ E V
Sbjct: 192 EEPGIFIASFDRPNLSLEVRPGQQR----LGQIQEFVQKHPKQAGIIYCLSRKTAEDVAA 247
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L++ G++ YHA +S +R +I F+ D I ++ AT AFGMGIDK +VR VIHY P
Sbjct: 248 KLAQQGLKAEAYHAGLSPDRRSKIQDNFINDNIHIICATVAFGMGIDKSNVRWVIHYNLP 307
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K+L YYQEIGRAGRDG + FY AD + I Q N ++ E ++R+++
Sbjct: 308 KNLEGYYQEIGRAGRDGAKADTLLFYSFADVSMLRDIIQNGENAAQ-NEIQLVKLERMQQ 366
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
Y E CRR+ LL +F S+ C CD CR+
Sbjct: 367 YAESLACRRRILLAYF---------SENLSKNCGNCDICRN 398
>gi|346979414|gb|EGY22866.1| ATP-dependent helicase SGS1 [Verticillium dahliae VdLs.17]
Length = 1518
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 167/291 (57%), Gaps = 14/291 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R ++ +DEAHCVSQWGHDFRP Y+ L +LR P VPI+A+TATAT VI DI +
Sbjct: 749 RNQKLARFVVDEAHCVSQWGHDFRPDYKDLFKLRSNYPSVPIIALTATATTNVIVDIQHN 808
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTKVICE 245
L + + F+RPNL A K+ ++ + +L + ++NQ + IIY ++ E
Sbjct: 809 LQIDKCQVFTQSFNRPNLTYAVERKEKGLIETIAQLIQSKYDNQ---TGIIYVLSRKNTE 865
Query: 246 KVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
V L N GI YHA + +++ + + K IKVVVAT AFGMGIDKPDVR VI
Sbjct: 866 DVATKLRDNYGISASHYHAAMKPEEKWNVQRRWQKGSIKVVVATIAFGMGIDKPDVRFVI 925
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTM 363
H+ PK L YYQE GRAGRDG S C ++ D FT MI + ++ E +E + M
Sbjct: 926 HHSLPKSLEGYYQETGRAGRDGKPSDCILYFGYGDVFTLKKMINDGDGSE-EQKERQRGM 984
Query: 364 MKRVEKYL-ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ R+ Y + + CRR +L +F G + VA+ +K CDNC H + E
Sbjct: 985 LNRMSTYCDDQKDCRRVTILRYF-GEAFNVADC----NKTCDNCLHKGVFE 1030
>gi|218261590|ref|ZP_03476344.1| hypothetical protein PRABACTJOHN_02012 [Parabacteroides johnsonii
DSM 18315]
gi|423343392|ref|ZP_17321105.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|218223945|gb|EEC96595.1| hypothetical protein PRABACTJOHN_02012 [Parabacteroides johnsonii
DSM 18315]
gi|409215467|gb|EKN08467.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 609
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 156/283 (55%), Gaps = 22/283 (7%)
Query: 129 IPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICT 186
+PRI LIAIDEAHC+S WGHDFRP Y LS L+ P VPI+A+TATA + DI
Sbjct: 125 LPRIDISLIAIDEAHCISHWGHDFRPEYTQLSVLKENFPKVPIVALTATADKITRTDILN 184
Query: 187 SLMLRDPNIINTGFDRPNLYLA---ASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
L LRDP + FDRPNL L K++ I A + + Q S IIYC ++
Sbjct: 185 QLKLRDPKTFISSFDRPNLSLTIRRGLSKKEKIAAIVHFINRHHRQ---SGIIYCMSRNS 241
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + + LS I+ YHA +S +R++ F+ D + VV AT AFGMGIDK +VR V
Sbjct: 242 TESLVEELSEYSIRAVAYHAGLSPDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWV 301
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY P + YYQEIGRAGRDG+ S FY D ++ + +S ++ S
Sbjct: 302 IHYNMPSSIENYYQEIGRAGRDGMKSDTLLFYSVGDI----LLLRRFAEESGQKDVSLQK 357
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+ +Y E CRR+ LL++F + DK C NC
Sbjct: 358 LNRMRRYCEADICRRRILLSYFGEET----------DKDCGNC 390
>gi|363580854|ref|ZP_09313664.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium HQM9]
Length = 702
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 210/424 (49%), Gaps = 49/424 (11%)
Query: 5 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQ 64
P ++DS++ ++ +K Y E R +++ + FKG+ + + P +
Sbjct: 2 PEISDSQLYKN----LKEYFGYSEFRQQQKEIITAIFKGNDNLV----IMP---TGGGKS 50
Query: 65 VVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCV------------SQWGHDFRPSYRCLS 112
+ Y P + N + + I ++ + D+ + SQ D + +
Sbjct: 51 ICYQLPATLLNGLTLV--ISPLIALMKDQVDGLRANGIGAAFINSSQAAEDQHAIFNAIL 108
Query: 113 ELRLPLPDVPILFLSRIPRIV------LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD 166
+ L V LS++ I+ LIAIDEAHC+S WGHDFRP+Y L L+ P
Sbjct: 109 TNEIKLLYVAPESLSQLEGILNQTTLSLIAIDEAHCISAWGHDFRPAYTQLGFLKNRFPH 168
Query: 167 VPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF 226
PI+A+TATA +DI L L P + + FDRPNL L+ D + L + +
Sbjct: 169 TPIIALTATADKATREDISKQLNLNHPTLHLSSFDRPNLSLSVRPGIDRVKKILEFVDDH 228
Query: 227 ENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVV 286
N S IIYC ++ E + + L G + + YHA + R+++ F+ D +++V
Sbjct: 229 PND---SGIIYCLSRKTTENLAEKLDSAGFKAKAYHAGLGHHVREQVQNEFINDQLQIVC 285
Query: 287 ATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMI 346
AT AFGMGIDK +VR VIHY PK++ YYQEIGRAGRDG+ S F+ AD +
Sbjct: 286 ATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGVPSETILFHSYADVVQLQQ- 344
Query: 347 FQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CD 404
F ++E+Q + R+++Y + +CRRK LL++F ++P C CD
Sbjct: 345 FATKSGNTEVQ---LAKLDRMQQYADALSCRRKVLLSYF---------GELPEKDCGNCD 392
Query: 405 NCRH 408
C+H
Sbjct: 393 VCKH 396
>gi|354566185|ref|ZP_08985358.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
gi|353546693|gb|EHC16141.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
Length = 719
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 169/302 (55%), Gaps = 19/302 (6%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R +S+ LP D+ + I AIDEAHCVS+WGHDFRP YR L LR DVP
Sbjct: 119 RLVSDRFLPFLDL----IHHQVGISAFAIDEAHCVSEWGHDFRPEYRQLILLRKRYADVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
A TATAT V +DI L L++P+I F+R NLY K+ + A+L +L
Sbjct: 175 TWAFTATATDRVRNDIIQQLGLQNPSIHIASFNRQNLYYEVRPKKKNAYAELLELIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ +++ L + + PYHA ++ ++R + F++D ++V+VAT
Sbjct: 232 DSEGSGIIYCLTRKKVDEITFKLQHDQVSALPYHAGLTDEERTQNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIH+ P++L +YYQE GRAGRDG +S C F+ AD +
Sbjct: 292 IAFGMGINKPDVRFVIHFDIPRNLESYYQESGRAGRDGEASRCTLFFSYADVKIIEFLIN 351
Query: 349 PNLNDSEIQEH--SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
SE QE +K ++++ Y E CRR L++F E + CDNC
Sbjct: 352 ---QKSEPQEQLIAKQQLRQMIDYAEGTDCRRTIQLSYF-------GERFLGNCDNCDNC 401
Query: 407 RH 408
R+
Sbjct: 402 RY 403
>gi|229179100|ref|ZP_04306457.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 172560W]
gi|228604468|gb|EEK61932.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 172560W]
Length = 705
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P ILA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLILALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|30262788|ref|NP_845165.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Ames]
gi|47528112|ref|YP_019461.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185634|ref|YP_028886.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Sterne]
gi|65320112|ref|ZP_00393071.1| COG0514: Superfamily II DNA helicase [Bacillus anthracis str.
A2012]
gi|170704762|ref|ZP_02895228.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0389]
gi|229603340|ref|YP_002867093.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0248]
gi|30257420|gb|AAP26651.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Ames]
gi|47503260|gb|AAT31936.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179561|gb|AAT54937.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Sterne]
gi|170130563|gb|EDS99424.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0389]
gi|229267748|gb|ACQ49385.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0248]
Length = 705
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEEPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + ++ +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSIGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|323343308|ref|ZP_08083535.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
gi|323095127|gb|EFZ37701.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
Length = 725
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 153/280 (54%), Gaps = 16/280 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHC+S+WGHDFRP YR + + + P++A+TATAT V DI SL +
Sbjct: 137 ISFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGNAPVIALTATATDKVRTDIKKSLCIT 196
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFE-GSTIIYCPTKVICEKVCDV 250
+ + F+RPNLY K +DI R++ F Q S IIYC ++ E++ +
Sbjct: 197 EAKEFKSSFNRPNLYYEVRQKSNDID---RQVIKFIKQHPCKSGIIYCLSRKKVEELAAI 253
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY PK
Sbjct: 254 LLANEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPK 313
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
L YYQE GRAGRDG +C FY D K F +E Q+ + +++ Y
Sbjct: 314 SLEGYYQETGRAGRDGGEGICIAFYAQKDLQKLEK-FMEGKPVAE-QDIGRQLLQETAAY 371
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
E CRRK LL++F G T D C CDNC H
Sbjct: 372 AESSVCRRKMLLHYF-GEEYT-------KDNCHNCDNCLH 403
>gi|417781079|ref|ZP_12428834.1| ATP-dependent DNA helicase, RecQ family [Leptospira weilii str.
2006001853]
gi|410778720|gb|EKR63343.1| ATP-dependent DNA helicase, RecQ family [Leptospira weilii str.
2006001853]
Length = 624
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 172/325 (52%), Gaps = 23/325 (7%)
Query: 129 IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDIC 185
+P++ L IA+DEAHCVSQWGHDFRP YR L ELR +PI+A+TATATP VI DI
Sbjct: 135 LPKLPLGRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYQRQIPIVALTATATPKVIQDIS 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPT 240
SL L++P +I F R NL + Q++ + L KL NF+ G IIYC T
Sbjct: 195 NSLGLKNPTLIKGSFYRENLNFSVRFPQNETSKENELLKLLIRGNFQKTESGKAIIYCAT 254
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + L +NG + YHA + R++ + ++VAT AFGMG+D PDV
Sbjct: 255 RQKVESTYNFLKKNGFKVGKYHAGRTDSSREKTQNGYNIGKTNILVATNAFGMGLDNPDV 314
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R V+H+ P L +YYQE GRAGRDG SS C FY +D N I N ++
Sbjct: 315 RLVVHFQIPASLESYYQEAGRAGRDGKSSNCILFYHPSDLVTQNFIIGKENN----RKGG 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRG 420
+T++ V++Y CR++ L ++F ++ K CD C E + P G
Sbjct: 371 ETLLSFVKEYAISDRCRQQILCSYFG--------EEIKSCKTCDICSEKESSNI-SFPNG 421
Query: 421 GRMVVENSEVWMSTEARPGREAFEF 445
+E + + + RE ++F
Sbjct: 422 RDQFLEREKA--KKQKQEERERYDF 444
>gi|300721460|ref|YP_003710735.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
gi|297627952|emb|CBJ88501.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
Length = 608
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 20/279 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R V++A+DEAHC+SQWGHDFRP YR L +LR P++P++A+TATA DI L L
Sbjct: 139 RPVVLAVDEAHCISQWGHDFRPEYRALGQLRRRFPNLPVIALTATADNTTRQDIVRLLEL 198
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+P I + FDRPN+ K L +L +F +G S IIYC ++ E+ +
Sbjct: 199 HEPIIHLSSFDRPNIRYTLVEK----YKPLDQLWSFVRAQQGKSGIIYCNSRTKVEETAE 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + G+ PYHA + QR + F +D +++VVAT AFGMGI+KP+VR V+H+ P
Sbjct: 255 RLQKRGLSVAPYHAGLENDQRAWVQDAFQRDDLQIVVATVAFGMGINKPNVRFVVHFNIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
+++ +YYQE GRAGRDGL + FY AD + + + +P +I+ H M
Sbjct: 315 RNIESYYQETGRAGRDGLPAEAVLFYDPADMVWLRRCLEEKPAGEQQDIERHKLNAMG-- 372
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F S K C NC
Sbjct: 373 -AFAEAQTCRRLVLLNYFGESR----------QKDCGNC 400
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 161/285 (56%), Gaps = 12/285 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L RI ++ I +DEAHCVS WGHDFRP Y+ L+ + PD+P++A+TATA V+ DI
Sbjct: 661 LHRIGKLARIVVDEAHCVSSWGHDFRPDYKTLNYFKKEYPDIPVMALTATANEHVVMDIV 720
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN-QFEGST-IIYCPTKVI 243
+L L P F+R NL+ VK L ++TN N Q+ T IIYC +K
Sbjct: 721 HNLGLNKPQCFKQSFNRTNLFYKVQVK---TKTHLDEITNMINGQYRNQTGIIYCHSKNS 777
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
CE+ L +NGI+ YHA ++ + R + + D I+V+ AT AFGMGIDKPDVR V
Sbjct: 778 CEQTSARLIQNGIKCSFYHAGMTTEDRFAVQSAWQSDKIRVICATIAFGMGIDKPDVRFV 837
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKT 362
IH P+ L YYQE GRAGRDG S C FY D + Q +++ E +E+
Sbjct: 838 IHLTVPRTLEGYYQETGRAGRDGNHSDCIMFYSYRDVRTLQTMIQKDVDLTRENKENHLN 897
Query: 363 MMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+++V +Y E T CRR+ +L +F + + Q K CDNC
Sbjct: 898 KLRKVIQYCENGTDCRRQQVLQYF-NENFDKKDCQ----KQCDNC 937
>gi|165868634|ref|ZP_02213294.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0488]
gi|167631805|ref|ZP_02390132.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0442]
gi|167637571|ref|ZP_02395850.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0193]
gi|170685476|ref|ZP_02876700.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0465]
gi|177649646|ref|ZP_02932648.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0174]
gi|190565352|ref|ZP_03018272.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str.
Tsiankovskii-I]
gi|227814370|ref|YP_002814379.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. CDC 684]
gi|254685381|ref|ZP_05149241.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str.
CNEVA-9066]
gi|254722788|ref|ZP_05184576.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A1055]
gi|254737836|ref|ZP_05195539.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Western
North America USA6153]
gi|254742990|ref|ZP_05200675.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Kruger B]
gi|254752151|ref|ZP_05204188.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Vollum]
gi|254760670|ref|ZP_05212694.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. Australia
94]
gi|386736560|ref|YP_006209741.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. H9401]
gi|421510247|ref|ZP_15957143.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. UR-1]
gi|421636606|ref|ZP_16077205.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. BF1]
gi|164715360|gb|EDR20877.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0488]
gi|167514120|gb|EDR89487.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0193]
gi|167532103|gb|EDR94739.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0442]
gi|170670836|gb|EDT21575.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0465]
gi|172084720|gb|EDT69778.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. A0174]
gi|190563379|gb|EDV17344.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007076|gb|ACP16819.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. CDC 684]
gi|384386412|gb|AFH84073.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. H9401]
gi|401819703|gb|EJT18877.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. UR-1]
gi|403397134|gb|EJY94371.1| ATP-dependent DNA helicase RecQ [Bacillus anthracis str. BF1]
Length = 705
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEEPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + ++ +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSIGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|429740154|ref|ZP_19273860.1| ATP-dependent DNA helicase RecQ [Prevotella saccharolytica F0055]
gi|429154163|gb|EKX96911.1| ATP-dependent DNA helicase RecQ [Prevotella saccharolytica F0055]
Length = 725
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 155/288 (53%), Gaps = 15/288 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL I ++ AIDEAHC+S+WGHDFRP YR + + + PI+A+TATAT V
Sbjct: 129 IEFLKTI-KVSFYAIDEAHCISEWGHDFRPEYRNIRPTIMKIGKAPIIALTATATDKVRS 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D + F+R NLY K D+ D + + + S IIYC ++
Sbjct: 188 DIKKNLGISDAKEFKSSFNRVNLYYEVRSKTQDV--DRNIIMFIKQHADKSGIIYCLSRK 245
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ VL N I+ PYHA + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 246 KVEELAAVLQANNIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRF 305
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK L YYQE GRAGRDG +C FY D K F + +E Q+ +
Sbjct: 306 VIHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYSNQDLRKLEK-FIDGKSGAE-QDIGRQ 363
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ Y E CRRK LL++F G T + C CDNC H
Sbjct: 364 LLLETAAYAESSVCRRKMLLHYF-GEEYT-------EENCHNCDNCLH 403
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
Length = 692
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 152/258 (58%), Gaps = 10/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ L AIDE+HC+S+WGHDFRP YR LS L+ P +PI+A+TATATP V D + L +
Sbjct: 127 KVNLFAIDESHCISEWGHDFRPEYRKLSILKRKYPHIPIIALTATATPKVRKDTISQLHI 186
Query: 191 RDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
D N F+R NL K++ I+ LRK + + S IIYC ++ +++
Sbjct: 187 EDCNTYVASFNRKNLLYQVRPKKETYEQIVEFLRK------RKDKSGIIYCQSRKTVDEL 240
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L ++G PYHA +S R +F+KD +++VAT AFGMGIDKP+VR VIHY
Sbjct: 241 TGKLRKSGFNALPYHAGLSDAARSRNQDIFIKDDAEIIVATIAFGMGIDKPNVRFVIHYD 300
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
P++L +YYQE GR GRDGL C F+ D K + F + SE +E ++ +K V
Sbjct: 301 LPRNLESYYQETGRGGRDGLECECILFFSRGDKYKIDY-FIDQIAKSEEREAARLKLKEV 359
Query: 368 EKYLELRTCRRKYLLNHF 385
Y + CRRK LL +F
Sbjct: 360 MDYCQSTICRRKMLLRYF 377
>gi|428302021|ref|YP_007140327.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
gi|428238565|gb|AFZ04355.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
Length = 724
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 163/300 (54%), Gaps = 15/300 (5%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R +SE LP D+ ++ I AIDEAHCVS+WGHDFRP YR L LR +P
Sbjct: 119 RLVSERFLPFLDL----VNHQVGIAGFAIDEAHCVSEWGHDFRPEYRQLITLRQRYSGIP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+ A+TATAT V DI L L++P+I F+R NLY K + A++ +L
Sbjct: 175 LFALTATATDRVRADIIEQLGLQEPSIHIASFNRQNLYYEVRPKTKTVYAEVLELIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+ E STIIYC T+ +++ L + I YHA +S ++R F++D ++V+VAT
Sbjct: 232 ESEASTIIYCLTRKQVDELTFKLQHDKISALAYHAGLSDEERTNNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGIDKPDVR VIHY P+++ YYQE GRAGRDG S C F+ D
Sbjct: 292 VAFGMGIDKPDVRLVIHYNLPRNIEGYYQESGRAGRDGEPSRCTMFFGVGDIKTIEWSIN 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
DS+ Q +K +++V + E CRR L +F E + CDNCR+
Sbjct: 352 QK-TDSQEQLIAKQQLRQVIDFAEGTDCRRTIQLGYF-------GERFLGNCGNCDNCRY 403
>gi|423413420|ref|ZP_17390540.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG3O-2]
gi|423430795|ref|ZP_17407799.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG4O-1]
gi|401101518|gb|EJQ09507.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG3O-2]
gi|401118872|gb|EJQ26700.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG4O-1]
Length = 705
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P ILA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLILALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|443324439|ref|ZP_21053192.1| ATP-dependent DNA helicase RecQ [Xenococcus sp. PCC 7305]
gi|442795958|gb|ELS05292.1| ATP-dependent DNA helicase RecQ [Xenococcus sp. PCC 7305]
Length = 709
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 148/253 (58%), Gaps = 8/253 (3%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
IAIDEAHCVS+WGHDFRP YR L +LR P PI A TATAT V DDI L LRD N
Sbjct: 139 IAIDEAHCVSEWGHDFRPEYRQLKQLRSQFPQTPIFAFTATATKRVQDDIIQQLGLRDAN 198
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
+ F+RPNL+ VK D + + L + Q GS I+YC ++ E++ L +
Sbjct: 199 VHLASFNRPNLHY--EVKSKDKNSYYQLLKDIRRQ-SGSGIVYCLSRRRVEEIALKLKHD 255
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI PYHA + + R F++D +V+VAT AFGMGI+KPDVR V H+ P+ L +
Sbjct: 256 GIDALPYHAGLEAEVRSHNQTRFLRDDARVIVATVAFGMGINKPDVRFVFHFDLPRSLES 315
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEHSKTMMKRVEKYLE 372
+YQE GRAGRDG ++ F+ D K + + + P+ N+ I ++ + +V Y E
Sbjct: 316 FYQESGRAGRDGETAKSTLFFSFGDIKKVDYLIEQKPDPNEQRI---ARQQLNQVIDYAE 372
Query: 373 LRTCRRKYLLNHF 385
CRR +L +F
Sbjct: 373 GTVCRRTIILRYF 385
>gi|409195579|ref|ZP_11224242.1| putative ATP-dependent DNA helicase [Marinilabilia salmonicolor JCM
21150]
Length = 726
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 161/292 (55%), Gaps = 24/292 (8%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ +I A+DEAHC+S+WGHDFRP YR + + + D P++A+TATATP V
Sbjct: 129 IQFLKQV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIISEIGDAPVIALTATATPKVQH 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQD---DIMADLRKLTNFENQFEGSTIIYCP 239
DI +L + + ++ + F+R NL+ K + +I+ L++ T S IIYC
Sbjct: 188 DIQKNLGMLNAHVYKSSFNRANLFYEVRPKVNATREIIKILKENTG------KSAIIYCL 241
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
++ E++ + L NGI+ PYHA + R F+ + I V+VAT AFGMGIDKPD
Sbjct: 242 SRKKVEELAETLVVNGIKALPYHAGMDAATRSGNQDKFLMEEIDVIVATIAFGMGIDKPD 301
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQE 358
VR VIHY PK L YYQE GRAGRDG C FY D K Q L + EI
Sbjct: 302 VRIVIHYDIPKSLEGYYQETGRAGRDGGEGRCIAFYSYKDIQKLEKFMQGKPLAEQEI-- 359
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
K ++ Y E CRRK LL++F G + T + C CDNC H
Sbjct: 360 -GKQLLLETVAYAESSVCRRKMLLHYF-GETYT-------EENCSTCDNCVH 402
>gi|332878105|ref|ZP_08445835.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047651|ref|ZP_09109249.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332684067|gb|EGJ56934.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529339|gb|EHG98773.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 727
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 174/340 (51%), Gaps = 28/340 (8%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL + +I AIDEAHC+S+WGHDFRP YR + + + P++A+TATAT
Sbjct: 126 DENVDFLRNV-KISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGAAPVIALTATATDK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D + F+RPNLY K ++ D+ F Q G S IIY
Sbjct: 185 VRGDIKKNLGMTDAKEFKSSFNRPNLYYEVRNKTKNVDKDI---IRFIKQRPGKSGIIYA 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E++ ++L N I R YHA + R + F+ + I V+VAT AFGMGIDKP
Sbjct: 242 LSRKRVEELAEILRANDINARAYHAGMDSATRSQTQDDFIMERIDVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE 358
DVR VIHY PK L YYQE GRAGRDG +C T+Y D K + Q+
Sbjct: 302 DVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCITYYTYKDLQKLEKFMEGKPVAE--QD 359
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH-------- 408
+ ++ Y E CRRK+LL++F + + C CDNC H
Sbjct: 360 IGRQLLSETAAYAESSVCRRKFLLHYFG--------EEYHEENCGNCDNCLHPKKKVEAK 411
Query: 409 NEMLELEQVPRGGRMVVENSEVWMSTEARPGREAFEFLPH 448
N++ EL +V + V EN + + G+E E + H
Sbjct: 412 NQLKELLEVVQA---VKENFKADYIIDVLVGKETDEVIAH 448
>gi|206971887|ref|ZP_03232836.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1134]
gi|206733272|gb|EDZ50445.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1134]
Length = 705
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P ILA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLILALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|163814537|ref|ZP_02205926.1| hypothetical protein COPEUT_00688 [Coprococcus eutactus ATCC 27759]
gi|158450172|gb|EDP27167.1| putative ATP-dependent DNA helicase RecQ [Coprococcus eutactus ATCC
27759]
Length = 675
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 179/338 (52%), Gaps = 19/338 (5%)
Query: 118 LPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATA 176
L L + + ++ +DEAHC+SQWG DFRPSY +++ LP P++ A TATA
Sbjct: 120 LGTAQFLDFAGKASLAMVTVDEAHCISQWGQDFRPSYLEIADFIDKLPVRPVVSAFTATA 179
Query: 177 TPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STI 235
T +V DI +L L P I TGFDRPNL+ ++ D + N+ + EG S I
Sbjct: 180 TDIVRRDIVQNLRLESPVTIVTGFDRPNLFFKVVNRKGGRETD-NSVLNYVKRHEGESGI 238
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGI 295
IYC TK EKV ++L +GI YHA +S+++RK F D + V+VAT AFGMGI
Sbjct: 239 IYCATKKNVEKVHELLVAHGISAGRYHAGLSMEERKRSQEDFTYDRLSVMVATNAFGMGI 298
Query: 296 DKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ------- 348
DK +VR V+HY P+ L YYQE GRAGRDG + C F+ D N + +
Sbjct: 299 DKSNVRYVLHYNMPQSLEYYYQEAGRAGRDGEEAECVLFFSKQDIMINKRLLEHKVSSAN 358
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++D E++ + + + ++ +Y E C R+Y+L +F ES DKC NC
Sbjct: 359 AGIDDDELRANDQRKLNQMIRYCETDQCLRQYILRYFGD------ESPCTCDKCS-NCVV 411
Query: 409 NEMLELEQVPRGGRMVVENSEVWMSTEARPGREAFEFL 446
E E EQ + V+ V M+ G E FE L
Sbjct: 412 TEE-ETEQSYITDKRAVKKMAV-MADLTDEGMELFELL 447
>gi|52142697|ref|YP_084132.1| ATP-dependent DNA helicase Q [Bacillus cereus E33L]
gi|51976166|gb|AAU17716.1| ATP-dependent DNA helicase Q [Bacillus cereus E33L]
Length = 705
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L ++G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKSGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|343085469|ref|YP_004774764.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342354003|gb|AEL26533.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 725
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 163/280 (58%), Gaps = 17/280 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I +AIDEAHC+S+WGHDFRP YR + + + D +P++A+TATATP V DI +L +
Sbjct: 132 ISFVAIDEAHCISEWGHDFRPEYRKIKSIIAQIGDNLPVIALTATATPKVQQDIQRNLQM 191
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKVICEKVC 248
+ ++ + F+R NLY K + ++ +K + ++Q S IIYC ++ ++
Sbjct: 192 EEADLFKSSFNRTNLYYEVRPK---VKSETKKEIIKYIKSQKGKSGIIYCLSRKKVTEIA 248
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
++L NGI PYHA + R + F+ + + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 249 ELLKVNGINAAPYHAGLDGHVRVKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDV 308
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSKTMMKRV 367
PK L YYQE GR+GRDGL C FY+ D K + +N+ +E+++ +++ +
Sbjct: 309 PKSLEGYYQETGRSGRDGLEGHCLMFYRYEDIIKLEKFNKDKPVNE---RENARVLLQEM 365
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
Y E CRR++LL++F E+ CDNC+
Sbjct: 366 AAYAESSVCRRRFLLHYF-------GETLSKDCGFCDNCK 398
>gi|225025801|ref|ZP_03714993.1| hypothetical protein EUBHAL_00026 [Eubacterium hallii DSM 3353]
gi|224956885|gb|EEG38094.1| putative ATP-dependent DNA helicase RecQ [Eubacterium hallii DSM
3353]
Length = 667
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 155/264 (58%), Gaps = 6/264 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++ +DEAHC+SQWG DFRPSY +++ LP P++ A TATAT V DI SL L
Sbjct: 130 ISMVTVDEAHCISQWGQDFRPSYVGIADFLAQLPKRPVVSAFTATATERVKQDIMGSLRL 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
++P + TGFDRPNL+ ++ D L + + S IIYC TK +K+ +
Sbjct: 190 QNPVTVVTGFDRPNLFFRVVTRKGGKETDNSVLNYVKKHEDESGIIYCATKKNADKIYGL 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + GI+ YHA +SL++RK+ F D I+V+VAT AFGMGIDK +VR V+HY P+
Sbjct: 250 LQQYGIEAGHYHAGLSLEERKKNQDDFTYDRIRVMVATNAFGMGIDKSNVRYVLHYNMPQ 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS-----EIQEHSKTMMK 365
L YYQE GRAGRDG + C F+ D N + + +S +++ + +
Sbjct: 310 SLEYYYQEAGRAGRDGEEAECVLFFSKQDIMINKRLLEYKSTESIESDPQVRRNDYQKLN 369
Query: 366 RVEKYLELRTCRRKYLLNHFKGSS 389
R+ Y E + C R+++L++F +S
Sbjct: 370 RMIDYCETQQCLRQFILSYFGDNS 393
>gi|114778864|ref|ZP_01453663.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
gi|114550899|gb|EAU53464.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
Length = 724
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 160/286 (55%), Gaps = 20/286 (6%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL+++ ++ L AIDEAHCVSQWGHDFRP Y L ELR PDVP+LA+TATA +
Sbjct: 130 FLTKLEKLKLSMFAIDEAHCVSQWGHDFRPEYVRLGELREIFPDVPMLALTATADEHTRE 189
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L FDRPN+ + K+ + L+ L + N S +IYC ++
Sbjct: 190 DISDRLQLGKAKRFVASFDRPNIRYLVAEKRQPLTQILQFLDGWPN---ASGVIYCLSRK 246
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L R+GI+ YHA I + R+ + F++D +KV+VAT AFGMG+DKP+VR
Sbjct: 247 RVEDLAVNLQRHGIRAAAYHAGIPGRSRERVQDDFLRDRVKVIVATIAFGMGVDKPNVRF 306
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDGL S Y + D + + N++ ++ H
Sbjct: 307 VIHHDLPKSIESYYQETGRAGRDGLESEALMLYGSGDVNLVRRLIENVDNIDQRRVEVHK 366
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E TCRR+ LL +F G S+ D+ C NC
Sbjct: 367 LNSMV---AFSEALTCRRRVLLGYF-GESL---------DEPCGNC 399
>gi|423384359|ref|ZP_17361615.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG1X1-2]
gi|423529268|ref|ZP_17505713.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuB1-1]
gi|401640260|gb|EJS57992.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG1X1-2]
gi|402448697|gb|EJV80536.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuB1-1]
Length = 705
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|441498157|ref|ZP_20980358.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441438064|gb|ELR71407.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 728
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 165/289 (57%), Gaps = 22/289 (7%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL + + +A+DEAHC+S+WGHDFRP YR + E+ L ++PI+A+TATATP V
Sbjct: 128 IDFLKK-ANVSFVAVDEAHCISEWGHDFRPEYRRIKEIIGLLGNLPIIALTATATPKVQL 186
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + ++ + F+R NL+ K+ ++L F +G S I+YC ++
Sbjct: 187 DIQKNLHMEGADVFKSSFNRTNLFYEVRQKK----HAKKQLIQFLRDHKGKSGIVYCLSR 242
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
++ ++L+ NG + PYHA + R++ F+ + + +VVAT AFGMGIDKPDVR
Sbjct: 243 KKVVEIAELLNVNGFKAAPYHAGLEPAVREKNQDDFLNEDVDIVVATIAFGMGIDKPDVR 302
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ--EH 359
V+HY PK L YYQE GR+GRDGL C FY D K + D +Q E+
Sbjct: 303 FVVHYDVPKSLEGYYQETGRSGRDGLEGKCLMFYSHNDINK----LEKFNKDKPVQEREN 358
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ +++ + Y E CRRK LL++F G T D C CDNC
Sbjct: 359 ARVLLQEMSFYAESPVCRRKQLLHYF-GEEFTF-------DNCEMCDNC 399
>gi|33151690|ref|NP_873043.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
gi|33147911|gb|AAP95432.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
Length = 601
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 160/279 (57%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LI +DEAHCVSQWGHDFRP Y L LR +P++A+TATA P DI L L
Sbjct: 134 KISLIVVDEAHCVSQWGHDFRPEYALLGRLRKTFVGIPLMALTATADPTTRKDILQHLCL 193
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+P FDRPN+ K L +LT F + +G S IIYC ++ E++ +
Sbjct: 194 TNPYTYLGSFDRPNIRYTVQQK----FKPLEQLTQFILRQQGKSGIIYCNSRKKVEEISE 249
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ I YHA + ++QR+ + F +D I++VVAT AFGMGI+K +VR V+H+ P
Sbjct: 250 KLAARKISVMGYHAGMPVQQREMVQEAFQRDNIQIVVATIAFGMGINKSNVRFVVHFDLP 309
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + AYYQE GRAGRD L S FY +D+ + ++ +P + +I++H ++ +
Sbjct: 310 RSIEAYYQETGRAGRDDLPSEAVLFYNPSDYAWMEKTLLEEPETDQRQIKQHK---LQAI 366
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P + CD C
Sbjct: 367 GAFAESQTCRRLVLLNYF-------GESRQAPCQNCDIC 398
>gi|334345581|ref|YP_004554133.1| ATP-dependent DNA helicase RecQ [Sphingobium chlorophenolicum L-1]
gi|334102203|gb|AEG49627.1| ATP-dependent DNA helicase RecQ [Sphingobium chlorophenolicum L-1]
Length = 590
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 148/283 (52%), Gaps = 17/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R +I L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DDI
Sbjct: 124 LLRATKIALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADHHTRDDIL 183
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L + +I GFDRPN+ A V D + R+L++ G I+Y PT+ E
Sbjct: 184 VQLGIPRDGLIIAGFDRPNIRYA--VHPRDGLP--RQLSDLIAGQTGPGIVYAPTRAATE 239
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
K+ ++L + G R YHA + + R F+ V+VAT AFGMGIDKPDVR V H
Sbjct: 240 KLAEILGKTGRPTRAYHAGLDPRIRAANQAAFIASEDMVMVATIAFGMGIDKPDVRFVAH 299
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
PK + YYQE GRAGRDG + + F+ DF + D Q+ + +
Sbjct: 300 AALPKSIEGYYQESGRAGRDGEPAEAHLFWGADDFARARQRI--GELDPLRQQGERARIT 357
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E TCRR LL HF + PP C CDNC
Sbjct: 358 ALGGLVETGTCRRAILLRHF---------GENPPPGCGNCDNC 391
>gi|290477101|ref|YP_003470014.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
gi|289176447|emb|CBJ83256.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
Length = 608
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 156/277 (56%), Gaps = 17/277 (6%)
Query: 133 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
VL+A+DEAHC+SQWGHDFRP YR L + R P++P +A+TATA DI L L D
Sbjct: 141 VLLAVDEAHCISQWGHDFRPEYRALGQFRRRFPELPFIALTATADKTTRQDITRLLELHD 200
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVL 251
P I + FDRPN+ K L +L +F +G S IIYC ++ E+ + L
Sbjct: 201 PLIHLSSFDRPNIRYTLVEK----YKPLDQLWSFVRGQQGKSGIIYCNSRTKVEETAERL 256
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ G+ PYHA + QR + F +D ++VVVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 257 QKRGLSVAPYHAGLDNNQRAWVQDAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + F+ AD + + + +P +I+ H M
Sbjct: 317 IESYYQETGRAGRDGLPAEAILFFDPADMAWLRRCLEEKPAGEQQDIERHKLNAMG---A 373
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ESQ CD C
Sbjct: 374 FAEAQTCRRLVLLNYF-------GESQQTSCGNCDIC 403
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 171/317 (53%), Gaps = 37/317 (11%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R LSE L ++ +S I AIDEAHCVS+WGHDFRP YR L LR PDVP
Sbjct: 126 RLLSEKFLEFLEL----ISSQQGISTFAIDEAHCVSEWGHDFRPEYRQLKLLRETYPDVP 181
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
I+A+TATAT V +DI T L L+ P I F R NLY ++R+ T+ +N
Sbjct: 182 IMALTATATKRVREDITTQLNLQKPYIHIASFFRSNLYY-----------EVRQKTSAKN 230
Query: 229 QFE----------GSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFV 278
F GS I+YC ++ +++ L +N + YHA ++ ++R F+
Sbjct: 231 TFAEILQIIRTIGGSGIVYCNSRKRVDEIAYKLRQNNVSALAYHAGMTDEERTTNQTKFI 290
Query: 279 KDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTA 338
+D + V+VAT AFGMGIDKPDVR VIHY K++ YYQE GR+GRDG + C F+
Sbjct: 291 RDDVDVIVATVAFGMGIDKPDVRFVIHYDLSKNIEGYYQETGRSGRDGEPAQCILFFSYG 350
Query: 339 DFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVP 398
D + +++ E Q ++ ++R+ Y E CR + LL++F +
Sbjct: 351 DKRSIEYLIGQKVDEQE-QRIAEQQLRRIINYAEATECRHRVLLSYF---------GEDF 400
Query: 399 PDKC--CDNCRHNEMLE 413
P C CDNC++ + +E
Sbjct: 401 PGNCGNCDNCKYPKPIE 417
>gi|423593267|ref|ZP_17569298.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD048]
gi|401226933|gb|EJR33463.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD048]
Length = 705
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDICT+L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICTTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|406835090|ref|ZP_11094684.1| ATP-dependent DNA helicase RecQ [Schlesneria paludicola DSM 18645]
Length = 617
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 156/280 (55%), Gaps = 22/280 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ AIDEAHC+S WGHDFRP YR L +LR P V + A TATAT V DI L L
Sbjct: 137 KVSFFAIDEAHCISAWGHDFRPEYRMLQQLRTRFPGVGVHAYTATATEQVRQDISDQLGL 196
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
RDP + FDRPNL +++D+ +R + + Q G ++YC ++ +++ +
Sbjct: 197 RDPKWLIGSFDRPNLVYRVQ-RRNDLRKQVRAVVDAHPQEAG--VVYCISRREVDELAEY 253
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LS+ G + RPYHA +S R F+ D +++VAT AFGMGIDK +VR VIH GAPK
Sbjct: 254 LSQAGYKARPYHAGLSDADRVRHQDEFLNDQTQIIVATVAFGMGIDKSNVRYVIHTGAPK 313
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM----MKR 366
L Y QE GRAGRDGL + C+ + +A+F + E+ +KT+ +K
Sbjct: 314 SLEHYQQETGRAGRDGLEAECWLLWSSANFITWRKM------QEELPAEAKTLALESLKG 367
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+E++ +CR K L+ HF Q P + C+ C
Sbjct: 368 MERFCTGVSCRHKELVEHF---------GQTYPSESCNAC 398
>gi|229046514|ref|ZP_04192169.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH676]
gi|228724876|gb|EEL76178.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH676]
Length = 705
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|219870290|ref|YP_002474665.1| ATP-dependent DNA helicase RecQ, superfamily II [Haemophilus
parasuis SH0165]
gi|219690494|gb|ACL31717.1| ATP-dependent DNA helicase RecQ, superfamily II [Haemophilus
parasuis SH0165]
Length = 609
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 161/279 (57%), Gaps = 20/279 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHCVSQWGHDFRP Y L LR P++P++A+TATA P DI L L
Sbjct: 135 KISLIAVDEAHCVSQWGHDFRPEYTLLGGLRKTFPNIPLVALTATADPTTRFDIIHHLKL 194
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
DP+ FDRPN+ K + +L F + +G S I+YC ++ E++ +
Sbjct: 195 EDPHTYLGSFDRPNIRYTVQEK----FKPVDQLIKFISSQQGKSGIVYCNSRKKVEELTE 250
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS + YHA ++++QR+ + F +D I++VVAT AFGMGI+K +VR V+H+ P
Sbjct: 251 KLSSHRFSVMGYHAGMTMQQRETVQNAFQRDNIQIVVATVAFGMGINKSNVRFVVHFDLP 310
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + AYYQE GRAGRD L + FY AD+ ++ +P +I++H ++ +
Sbjct: 311 RSIEAYYQETGRAGRDDLPAEAVLFYDPADYGWLHKVLLEKPESEQRQIEQHK---LQAI 367
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F G + VA C NC
Sbjct: 368 GAFAESQTCRRLVLLNYF-GETRQVA---------CQNC 396
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 162/290 (55%), Gaps = 10/290 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L + ++ I +DEAHCVS WGHDFRP Y+ L+ + P++P++A+TATA V
Sbjct: 465 IQTLYQQGKLARIVVDEAHCVSSWGHDFRPDYKQLNFFKNEYPNIPMMALTATANEHVRK 524
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L LR P + F+R NL+ K D M ++ F QF G S IIYC +K
Sbjct: 525 DIIQNLQLRSPLFLKQSFNRINLFYEVRKKTKDCMVEIADAIKF--QFTGQSGIIYCHSK 582
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE+V L I++ YHA + +R I + + ++V+ AT AFGMGIDKPDVR
Sbjct: 583 NSCEQVSAYLQSKQIRSGFYHAGMDANERLMIQQDWQANKLQVICATVAFGMGIDKPDVR 642
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHS 360
V H+ P+ L YYQE GRAGRDG S C T+Y D T MI + D +E
Sbjct: 643 FVYHFTVPRTLEGYYQETGRAGRDGKPSYCITYYSFKDVRTIQKMIQRDKDLDRANKEKH 702
Query: 361 KTMMKRVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
+++V Y + + CRRK +L++F + VA DK CDNCR+N
Sbjct: 703 FDKLQQVMSYCDNIHECRRKLVLSYFNEAFDPVA-----CDKNCDNCRNN 747
>gi|255690250|ref|ZP_05413925.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|260624270|gb|EEX47141.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
Length = 601
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 160/286 (55%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMGVLHQQFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L +VK+ + K + + + S IIYC ++
Sbjct: 180 IRQLHLIRPRTFISSFDRPNISL--TVKRGFQTKEKNKAIIEFIQRHGKESGIIYCMSRN 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V L + GI+ YHA +S +QR E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQTLLKQGIRCGVYHAGLSAQQRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ ++S Q+ +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFASESSQQKINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETATEDCGNCDVCKN 392
>gi|255570869|ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
gi|223534248|gb|EEF35962.1| conserved hypothetical protein [Ricinus communis]
Length = 795
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 12/233 (5%)
Query: 121 VPILFLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+P+ F S + ++ L+A+DEAHC+S+WGHDFR Y+ L +LR L DVP + +TATAT
Sbjct: 114 LPVSFWSSLLKVGVCLLAVDEAHCISEWGHDFRVEYKQLYKLRNILLDVPFVGLTATATA 173
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLA------ASVKQDDIMADLRKLTNFENQFEG 232
V DI SL + DP I FDR NL+ S D+++ ++ K +
Sbjct: 174 KVRFDIINSLKMNDPYISVGSFDRKNLFYGVKHFNRGSQFMDELVQEISKFVGNGD---- 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
STIIYC T E+V +L + GI+ YH + K R+E H F++D + V+VAT AFG
Sbjct: 230 STIIYCTTVKDVEQVFQLLQQAGIRAGIYHGQMGNKAREESHKSFIRDELHVMVATIAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNM 345
MGIDKP++R VIHYG PK L +YYQE GR GRDG+ SVC+ +Y +DF K +
Sbjct: 290 MGIDKPNIRQVIHYGCPKSLESYYQESGRCGRDGIPSVCWLYYTGSDFAKGDF 342
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 158/283 (55%), Gaps = 16/283 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R + IDEAHCVSQWGHDFRP Y+ + E+R LP VP++A+TATAT V D +L +
Sbjct: 432 RFARLVIDEAHCVSQWGHDFRPDYKEIGEVRNRLPGVPVMALTATATENVKLDTIHNLGI 491
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCPTKVICEKVC 248
+ + F+RPNLY +K DL + + ++ + + IIYC ++ CE +
Sbjct: 492 KGCEVFTQSFNRPNLYYEVRMKGKG-KNDLASIASLIKDDHPKQTGIIYCFSRKDCENMA 550
Query: 249 DVL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L S++GI+ YHA + ++ + + V+VAT AFGMGIDKP+VR VIH+
Sbjct: 551 NALQSQHGIKAHHYHAGMEGPEKANVQKEWQAGRYHVIVATIAFGMGIDKPNVRFVIHHT 610
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG S CY FY D +K E +E + M+K++
Sbjct: 611 IPKSLEGYYQETGRAGRDGKPSSCYLFYGFGDASKQKRFIDDGEGSHEQKERQRQMLKKM 670
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNC 406
+Y + R+ CRR +L +F + P+ C CDNC
Sbjct: 671 TQYCDNRSDCRRVQVLGYF--------SERFDPEDCDGGCDNC 705
>gi|347528817|ref|YP_004835564.1| ATP-dependent DNA helicase RecQ [Sphingobium sp. SYK-6]
gi|345137498|dbj|BAK67107.1| ATP-dependent DNA helicase RecQ [Sphingobium sp. SYK-6]
Length = 587
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 148/278 (53%), Gaps = 17/278 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
RI L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA +DI L +
Sbjct: 129 RISLFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPDVPRLALTATADRHTREDILAQLGI 188
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+I +GFDRPN+ A V+ D + R+L + G IIY PT+ E++
Sbjct: 189 PPEGLIISGFDRPNIRYA--VQPRDGLQ--RQLQDVLAANSGPGIIYAPTRAATEQLAQG 244
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L+R G PYHA +S + R F+ V+VAT AFGMGIDKPDVR V+H G PK
Sbjct: 245 LARGGRTVLPYHAGLSSEVRAANQSAFLASEDMVMVATVAFGMGIDKPDVRFVVHAGLPK 304
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ +YYQE GRAGRDG ++ + DF + + Q + + +
Sbjct: 305 SIESYYQESGRAGRDGEPAIALLLWGAEDFVRARQRIAE--VEPARQSGERARIASLGAL 362
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+E CRR LL HF + PP +C CDNC
Sbjct: 363 VETAGCRRAVLLRHF---------GETPPPQCGNCDNC 391
>gi|89889904|ref|ZP_01201415.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
gi|89518177|gb|EAS20833.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
Length = 719
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 166/294 (56%), Gaps = 13/294 (4%)
Query: 98 SQWGHDFRPSYRCLSELRLPL----PDVPILFLSRIP--RIVLIAIDEAHCVSQWGHDFR 151
SQ G + + + L E RL L P+ L L + I LIAIDEAHC+S WGHDFR
Sbjct: 88 SQVGTEQQEMLQLLKENRLKLLYVAPESIQLLLHHLKPTDISLIAIDEAHCISTWGHDFR 147
Query: 152 PSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASV 211
P+Y L+ L+ P+ ++A+TATA DI L + FDRPNL L
Sbjct: 148 PAYTQLAYLKKSFPEAGLIALTATADRATRADIKKQLAISHAQEYVASFDRPNLTLEVRP 207
Query: 212 KQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRK 271
D + R L ++++ S IIYC ++ CEK+ D LS G YHA + + R+
Sbjct: 208 GNDRLAQVRRFLKKYQDE---SGIIYCLSRKSCEKLSDKLSSLGFSVAAYHAGLEHRFRE 264
Query: 272 EIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVC 331
+ F+KD IK+V AT AFGMGIDK +VR VIHY PK++ YYQEIGRAGRDG+ +
Sbjct: 265 SVQEQFIKDEIKIVCATIAFGMGIDKSNVRFVIHYNMPKNIEGYYQEIGRAGRDGIDAHA 324
Query: 332 YTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
F+ AD + F + +SE+Q ++R++++ + TCRR+ LL++F
Sbjct: 325 LLFHSYADVIQLRN-FASDSGNSEVQ---IAKLERMKQFADALTCRRRMLLSYF 374
>gi|380696494|ref|ZP_09861353.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
Length = 601
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 157/286 (54%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P +PI+A+TATA + +DI
Sbjct: 120 YLLRDMSISLFAIDEAHCISQWGHDFRPEYTQMGMLHQQFPQIPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L VK+ + K L E S IIYC ++
Sbjct: 180 IRQLHLVQPRTFISSFDRPNISL--DVKRGFQAKEKNKAILEFIHRHREESGIIYCMSRN 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGI+K +VR
Sbjct: 238 KTETVAQMLQKQGIRCGVYHAGLSSQHRDETQNDFINDRIQVVCATIAFGMGINKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGLSS FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLSSDTVLFYSLGDL----ILLTKFATESSQQTINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETSTEDCGNCDVCKN 392
>gi|261493662|ref|ZP_05990181.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261310662|gb|EEY11846.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 599
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 158/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I IA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA P DI L L
Sbjct: 131 KISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPNVPLMALTATADPTTRSDILHHLRL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
P+I FDRPN+ K L +L ++ +G S I+YC ++ E++ +
Sbjct: 191 NSPHIYLGSFDRPNIRYTVQEK----FKPLEQLIKLISKQQGKSGIVYCNSRKKVEEITE 246
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS I YHA +S +QR+ + F +D I++VVAT AFGMGI+K +VR V+H+ P
Sbjct: 247 KLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIAFGMGINKSNVRFVVHFDLP 306
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY +D+ + ++ +P I++H ++ +
Sbjct: 307 RSIESYYQETGRAGRDDLPSEAVLFYDPSDYAWLQKILLEEPESEQRNIKQHK---LQAI 363
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F E + K CD C
Sbjct: 364 GDFAESQTCRRLVLLNYF-------GEHRQEQCKNCDIC 395
>gi|436838278|ref|YP_007323494.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384069691|emb|CCH02901.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 735
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 163/285 (57%), Gaps = 15/285 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL+ + ++ + AIDEAHC+S WGHDFRP Y L+ LR P+VPI+A+TATA + DI
Sbjct: 144 FLNSL-KLSMFAIDEAHCISSWGHDFRPEYTQLNTLRRWFPNVPIIALTATADRLTRQDI 202
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L + DP + F+R NL L + I + KL + + G IIYC ++ C
Sbjct: 203 ADRLAMHDPAVFIDSFNRTNLSLQVLPGTNRI-GQIAKLLSLKPDTSG--IIYCLSRKSC 259
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E V L G YHA + +R + F++D ++++ AT AFGMGIDK +VR V+
Sbjct: 260 ESVAAKLIEKGYSAAYYHAGMDPNERARVQEAFLRDDVRIMCATIAFGMGIDKSNVRWVM 319
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTM 363
HY PK++ YYQEIGRAGRDGL S FY AD T +M+ + N + ++Q
Sbjct: 320 HYNMPKNIEGYYQEIGRAGRDGLPSQTVLFYSFADVATYKDMLTENNPANLQVQ---LAK 376
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E TCRR+ LL++F +E P CD CR+
Sbjct: 377 LERMQQYAEANTCRRQILLSYF-------SEQLAEPCGNCDVCRN 414
>gi|228953148|ref|ZP_04115207.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229080004|ref|ZP_04212535.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock4-2]
gi|229151025|ref|ZP_04279236.1| ATP-dependent DNA helicase RecQ [Bacillus cereus m1550]
gi|423424939|ref|ZP_17401970.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG3X2-2]
gi|423436318|ref|ZP_17413299.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG4X12-1]
gi|423506474|ref|ZP_17483064.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HD73]
gi|449089824|ref|YP_007422265.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228632585|gb|EEK89203.1| ATP-dependent DNA helicase RecQ [Bacillus cereus m1550]
gi|228703383|gb|EEL55838.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock4-2]
gi|228806563|gb|EEM53123.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401113711|gb|EJQ21580.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG3X2-2]
gi|401122932|gb|EJQ30716.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG4X12-1]
gi|402447915|gb|EJV79764.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HD73]
gi|449023581|gb|AGE78744.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|183600296|ref|ZP_02961789.1| hypothetical protein PROSTU_03856 [Providencia stuartii ATCC 25827]
gi|188020087|gb|EDU58127.1| ATP-dependent DNA helicase RecQ [Providencia stuartii ATCC 25827]
Length = 608
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 164/287 (57%), Gaps = 19/287 (6%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS++ I L+A+DEAHCVSQWGHDFRP YR + +LR PDVPI+A+TATA
Sbjct: 131 FLSQLSSWNISLLAVDEAHCVSQWGHDFRPEYRAIGQLRQHFPDVPIMALTATADETTRA 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI L L DP I + FDRPN+ K L +L F +G + I+YC ++
Sbjct: 191 DIVRLLALHDPLIQISSFDRPNIRYTLVEK----YKPLDQLWFFIKAQKGKAGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + +QR+ + F+KD +++VVAT AFGMGI+K +VR
Sbjct: 247 SKVEETAERLQKRGLSVAAYHAGLDNQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEH 359
V H+ P+++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H
Sbjct: 307 FVAHFDIPRNIEAYYQETGRAGRDGVEAEAVLFYDPADMAWLRRCLEEKPAGLQQDIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 367 K---LNAIAAFAEAQTCRRLVLLNYF-------GENRQAPCGNCDIC 403
>gi|335430604|ref|ZP_08557493.1| ATP-dependent DNA helicase RecQ [Haloplasma contractile SSD-17B]
gi|335431256|ref|ZP_08558139.1| ATP-dependent DNA helicase RecQ [Haloplasma contractile SSD-17B]
gi|334886961|gb|EGM25306.1| ATP-dependent DNA helicase RecQ [Haloplasma contractile SSD-17B]
gi|334887821|gb|EGM26140.1| ATP-dependent DNA helicase RecQ [Haloplasma contractile SSD-17B]
Length = 716
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 162/298 (54%), Gaps = 19/298 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV-TATATPVVI 181
I FL + I ++A+DEAHCVSQWGHDFRPSYR +SEL L PI+A TATAT V
Sbjct: 123 IDFLEHV-NISMVAVDEAHCVSQWGHDFRPSYRRISELIDRLTIRPIIAAYTATATEEVK 181
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPT 240
DI L L D ++ TGF+R NLY Q+ R L + NQ + S IIYC T
Sbjct: 182 QDIIKLLNLTDAFVLTTGFNRENLYFEVEKPQNK----FRTLRKYLNQHKKESGIIYCST 237
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E V D L+ G YHA + +R F+ D +++VAT AFGMGIDK ++
Sbjct: 238 RKTVESVTDKLNLLGFNATKYHAGVPEHERTANQEDFIYDRKQIMVATNAFGMGIDKSNI 297
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R V+HY PK++ AYYQE GRAGRDGL S C + +D N + N+N+ QEH+
Sbjct: 298 RYVVHYNMPKNMEAYYQEAGRAGRDGLESECVLLFSASDIVTNKFLI-SNMNEQN-QEHA 355
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH-NEMLELEQV 417
+ + Y C R Y+L +F +K C++C + N +EL +
Sbjct: 356 YKKLNEMTDYCNTDKCLRSYILIYF---------GDTDTEKECNHCSNCNNDIELTDI 404
>gi|255037625|ref|YP_003088246.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950381|gb|ACT95081.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 717
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 17/277 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L AIDE+HC+S WGHDFRP YR L+ L+L PDVPI+A+TATA V DI L +
Sbjct: 132 VTLFAIDESHCISSWGHDFRPEYRQLNLLKLRFPDVPIVALTATADRVTRRDILKQLNIE 191
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCDV 250
+ FDRPNL L + I ++ F N+ EG IIYC ++ E V
Sbjct: 192 HAETFISSFDRPNLSLNVLPGRKRI----EQIQRFVNKHEGQPGIIYCLSRKGTETVAAS 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G + YHA + +R ++ F++D I+++VAT AFGMGIDK +VR VIHY P
Sbjct: 248 LQKAGFRVAYYHAGMPGDKRSQVQENFLRDDIQIIVATIAFGMGIDKSNVRWVIHYNLPS 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
++ ++YQEIGRAGRDG S+ FY D T+ +MI + +E +E + R+++
Sbjct: 308 NVESFYQEIGRAGRDGASADTVLFYSYLDIITRQDMINNSD-QSAEQKELLHAKLNRMKQ 366
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Y E CRR+ LL++F P D C NC
Sbjct: 367 YAEADICRRRILLSYFNE----------PVDHDCGNC 393
>gi|417001954|ref|ZP_11941427.1| ATP-dependent DNA helicase RecQ [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479664|gb|EGC82756.1| ATP-dependent DNA helicase RecQ [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 591
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 210/424 (49%), Gaps = 47/424 (11%)
Query: 19 MMKRVEKYL---ELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTN 75
++++++KY R +R+ + N +G +V V P + + Y P +T+
Sbjct: 6 LLEKLKKYFGYDSFRQGQRELIENILEGRNVL----GVLP---TGGGKSICYQLPALMTD 58
Query: 76 NTSFLSRIPRIVLIAIDEAHCVSQWGHD--FRPSYRCLSELRLPLPDVP-----ILFLS- 127
S + I ++ + D+ + + G + F S E R L DV IL++S
Sbjct: 59 GVSLV--ISPLISLMKDQVDSLRENGINAGFINSSLDSEEYRKILSDVKTGQIKILYISP 116
Query: 128 ------------RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTAT 175
R I +A+DEAHC+SQWGHDFRPSY+ + +L L DV ILA TAT
Sbjct: 117 ERLENEFFRNFIRDIDICFVAVDEAHCISQWGHDFRPSYKLIPDLYQILGDVQILAFTAT 176
Query: 176 ATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTI 235
AT V +DI +L L +P I TGFDR NLY + ++ + L + ++ S I
Sbjct: 177 ATKEVREDIINNLQLSNPFIKVTGFDRKNLYFKVAKPKNKLTYLNSYLKDHRDE---SGI 233
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGI 295
IY T+ + + L G YHA +S +RK+ F+ D K++VAT AFGMGI
Sbjct: 234 IYASTRKKVDDIYKNLKSRGYAIEKYHAGLSEDERKKAQDNFIYDRAKIIVATNAFGMGI 293
Query: 296 DKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE 355
DK +VR VIHY PKD+ +YYQE GRAGRDG + C Y D N + N S
Sbjct: 294 DKSNVRFVIHYNMPKDMESYYQEAGRAGRDGEDATCILLYSGQDIIINKHLINLGTNYS- 352
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
++ ++ + Y+ C R+Y+L +F + D CDNC N + E++
Sbjct: 353 FKQFQMGKLQTIINYVNTTRCLREYILAYFGQDA----------DSHCDNC-SNCLSEIK 401
Query: 416 QVPR 419
+V +
Sbjct: 402 KVDK 405
>gi|371777407|ref|ZP_09483729.1| ATP-dependent DNA helicase [Anaerophaga sp. HS1]
Length = 726
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 158/287 (55%), Gaps = 18/287 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL ++ +I A+DEAHC+S+WGHDFRP YR + + + + P++A+TATATP V
Sbjct: 129 IQFLKQV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGEAPVIALTATATPKVQH 187
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + + + F+RPNLY K + ++ L + + S IIYC ++
Sbjct: 188 DIQKNLGMLNARVFKSSFNRPNLYYEVRPKVNATREIIKILKDNPGK---SAIIYCLSRK 244
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++ + L NGI+ YHA + R + F+ + I V+VAT AFGMGIDKPDVR
Sbjct: 245 KVEELAETLVVNGIKALAYHAGMDAATRSKNQDKFLMEEIDVIVATIAFGMGIDKPDVRM 304
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN-LNDSEIQEHSK 361
VIHY PK L YYQE GRAGRDG C FY D K Q L + EI K
Sbjct: 305 VIHYDIPKSLEGYYQETGRAGRDGGEGKCIAFYSYKDIQKLEKFMQGKPLAEQEI---GK 361
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ Y E CRRK LL++F G S T + C CDNC
Sbjct: 362 QLLLETVAYAESSLCRRKTLLHYF-GESYT-------EENCGACDNC 400
>gi|336171234|ref|YP_004578372.1| RecQ family ATP-dependent DNA helicase [Lacinutrix sp. 5H-3-7-4]
gi|334725806|gb|AEG99943.1| ATP-dependent DNA helicase, RecQ family [Lacinutrix sp. 5H-3-7-4]
Length = 730
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 158/285 (55%), Gaps = 14/285 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR L + + D +PI+ +TATATP V +DI
Sbjct: 131 RGVKISFMAVDEAHCISEWGHDFRPEYRNLRTIIQRIGDNIPIIGLTATATPKVQEDILK 190
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICE 245
+L + D F+RPNLY K + +D+ + F Q G T I+YC ++ E
Sbjct: 191 NLRMTDAKTFKASFNRPNLYYEVRPKTKTVDSDIIR---FVKQNSGKTGIVYCLSRKRVE 247
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ VL NGI+ PYHA + K R + +F+ + I VVVAT AFGMGIDKPDVR VIH
Sbjct: 248 ELAQVLQVNGIKAVPYHAGLDAKTRAKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVIH 307
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK + +YYQE GRAGRDG C +Y D K M +P QE +
Sbjct: 308 HDIPKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMSGKPVAE----QEIGHAL 363
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++ V + E RRK++L++F T D DN RH
Sbjct: 364 LQEVVAFCETSMSRRKFILHYFGEEFDTETGDGGDMD---DNMRH 405
>gi|421098511|ref|ZP_15559180.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. 200901122]
gi|410798474|gb|EKS00565.1| ATP-dependent DNA helicase, RecQ family [Leptospira borgpetersenii
str. 200901122]
Length = 620
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 159/290 (54%), Gaps = 20/290 (6%)
Query: 129 IPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDIC 185
+P++ L IA+DEAHCVSQWGHDFRP YR L ELR +PI+A+TATATP VI DI
Sbjct: 135 LPKLPLCRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYQHQIPIVALTATATPRVIQDIS 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPT 240
SL L++ +I F R NL + Q++ + L KL NF+ G IIYC T
Sbjct: 195 NSLGLKNHTLIKGSFYRENLNFSVRFPQNETSKENELLKLLIRGNFQKTESGKAIIYCAT 254
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E + + L +NG + YHA S R++ + V+VAT AFGMG+D PDV
Sbjct: 255 RQKVESIYNFLKKNGFKVGKYHAGRSDSSREKTQNGYNIGKTNVLVATNAFGMGLDNPDV 314
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R ++HY P L +YYQE GRAGRD SS C FY +D N I N ++
Sbjct: 315 RLIVHYQIPASLESYYQEAGRAGRDEKSSNCILFYHPSDLVTQNFIIGKENN----RKGG 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+T++ V++Y CR++ L ++F ++ P K CD C E
Sbjct: 371 ETLLSFVKEYAISNRCRQQILCSYFG--------EEIEPCKTCDICSEKE 412
>gi|386743723|ref|YP_006216902.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
gi|384480416|gb|AFH94211.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
Length = 608
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 164/287 (57%), Gaps = 19/287 (6%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS++ I L+A+DEAHCVSQWGHDFRP YR + +LR PDVPI+A+TATA
Sbjct: 131 FLSQLSSWNISLLAVDEAHCVSQWGHDFRPEYRAIGQLRQHFPDVPIMALTATADETTRA 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI L L DP I + FDRPN+ K L +L F +G + I+YC ++
Sbjct: 191 DIVRLLALHDPLIQISSFDRPNIRYTLVEK----YKPLDQLWFFIKAQKGKAGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + +QR+ + F+KD +++VVAT AFGMGI+K +VR
Sbjct: 247 SKVEETAERLQKRGLSVAAYHAGLDNQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEH 359
V H+ P+++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H
Sbjct: 307 FVAHFDIPRNIEAYYQETGRAGRDGVEAEAVLFYDPADMAWLRRCLEEKPAGLQQDIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 367 K---LNAIAAFAEAQTCRRLVLLNYF-------GENRQAPCGNCDIC 403
>gi|30020934|ref|NP_832565.1| ATP-dependent DNA helicase recQ [Bacillus cereus ATCC 14579]
gi|229128155|ref|ZP_04257137.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-Cer4]
gi|29896487|gb|AAP09766.1| ATP-dependent DNA helicase recQ [Bacillus cereus ATCC 14579]
gi|228655430|gb|EEL11286.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-Cer4]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|423655607|ref|ZP_17630906.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD200]
gi|401292875|gb|EJR98529.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD200]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHHILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|408674061|ref|YP_006873809.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387855685|gb|AFK03782.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 164/287 (57%), Gaps = 18/287 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
+ FL + ++ IA+DEAHC+S+WGHDFRP YR + + + P++PI+A+TATATP V
Sbjct: 129 LTFLKK-AKLSFIAVDEAHCISEWGHDFRPEYRRIRGIIDDIDPNLPIIALTATATPKVQ 187
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI +L + +I + F+R NLY K D ++ + N + + S IIYC ++
Sbjct: 188 QDIQKNLSMEQSHIFKSSFNRKNLYYEIRPKIDSKKQLIKYIANNKGK---SGIIYCLSR 244
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ +L+ NGI+ PYHA + R + F+ + ++VAT AFGMGIDKPDVR
Sbjct: 245 KKVEEIAGLLNVNGIKALPYHAGLDADTRMKNQDAFLNEECDIIVATIAFGMGIDKPDVR 304
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY APK L YYQE GRAGRDGL C FY D K F + +E +++++
Sbjct: 305 FVIHYDAPKSLEGYYQETGRAGRDGLEGNCLMFYAYDDILKLEK-FNKDKTVTE-RDNAR 362
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ + Y L CRR+ LL++F + C CDNC
Sbjct: 363 ALLMEMVAYSNLGVCRRRQLLSYF---------GEYTDKDCGFCDNC 400
>gi|218903941|ref|YP_002451775.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH820]
gi|218536429|gb|ACK88827.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH820]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|196032153|ref|ZP_03099567.1| ATP-dependent DNA helicase RecQ [Bacillus cereus W]
gi|228915416|ref|ZP_04079009.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228927868|ref|ZP_04090916.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228934090|ref|ZP_04096931.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228946431|ref|ZP_04108750.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195994904|gb|EDX58858.1| ATP-dependent DNA helicase RecQ [Bacillus cereus W]
gi|228813235|gb|EEM59537.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228825604|gb|EEM71396.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228831931|gb|EEM77520.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228844359|gb|EEM89417.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|325110491|ref|YP_004271559.1| ATP-dependent DNA helicase RecQ [Planctomyces brasiliensis DSM
5305]
gi|324970759|gb|ADY61537.1| ATP-dependent DNA helicase RecQ [Planctomyces brasiliensis DSM
5305]
Length = 741
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 153/263 (58%), Gaps = 10/263 (3%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FLSR ++ IA+DEAHC+S WGH FRP YR L LR P+V I A TATAT V DDI
Sbjct: 144 FLSR-QQVSFIAVDEAHCISSWGHQFRPEYRLLGSLRDRFPNVDIHAYTATATAQVRDDI 202
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L LR+P + FDRPNL +QD L F+ Q S IIYC ++
Sbjct: 203 AAQLDLREPELHVGNFDRPNLTYRVVPRQDSKKQIREVLDRFKGQ---SGIIYCISRKQV 259
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
+++ + L+++G ++ YHA + QR+ F+ + + +VVAT AFGMGIDKP+VR VI
Sbjct: 260 DELNEYLNQSGFRSAAYHAGLEHDQRQAAQDAFLSEQVDIVVATVAFGMGIDKPNVRFVI 319
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND--SEIQEHSKT 362
H + K L Y QE GRAGRDGL + C+ FY DF +++ L+D E + ++
Sbjct: 320 HASSTKSLENYQQEAGRAGRDGLPAECHLFYGARDFA----LWKKMLSDLEGEAGDVARE 375
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
++++ ++ CR + L+ HF
Sbjct: 376 QLQKMSRFCHTAICRHRQLVEHF 398
>gi|196041721|ref|ZP_03109012.1| ATP-dependent DNA helicase RecQ [Bacillus cereus NVH0597-99]
gi|196027490|gb|EDX66106.1| ATP-dependent DNA helicase RecQ [Bacillus cereus NVH0597-99]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHHILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|423551448|ref|ZP_17527775.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ISP3191]
gi|401187286|gb|EJQ94359.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ISP3191]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPEEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|384108557|ref|ZP_10009450.1| ATP-dependent DNA helicase RecQ [Treponema sp. JC4]
gi|383869944|gb|EID85550.1| ATP-dependent DNA helicase RecQ [Treponema sp. JC4]
Length = 656
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 162/284 (57%), Gaps = 7/284 (2%)
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
LF ++ I +DEAHCVSQWGHDFRP Y +S +R PD ++A+TATAT V D
Sbjct: 141 LFSQNNLQVSCITVDEAHCVSQWGHDFRPDYMEISTIRRYFPDAVMVALTATATDHVRQD 200
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I +LM+++P + + F+R N++L K A + ++ E S I+YC ++
Sbjct: 201 IIKNLMMKEPAVFISSFNRENIFLEVQPKGRGQEAIHQVISYIEKHKGESGIVYCNSRKQ 260
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
+++ D+LS YHA + + R + LFVKD I+++VAT AFGMGIDKP+VR V
Sbjct: 261 VDELTDILSTMNFSVGNYHAGLPDEVRAQNQELFVKDEIQIMVATIAFGMGIDKPNVRYV 320
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
I++ PK + YYQEIGRAGRDGL S Y AD K F+ D E ++ +
Sbjct: 321 INFDLPKSIEEYYQEIGRAGRDGLPSSALLLYSMADIHKIRWFFE----DCANPEQAENL 376
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR 407
++ + K+ TCRRK LL +F G +E + CCD C+
Sbjct: 377 LQSMVKFAGSNTCRRKTLLAYF-GEKYQPSEENA--NCCCDICK 417
>gi|347751808|ref|YP_004859373.1| ATP-dependent DNA helicase RecQ [Bacillus coagulans 36D1]
gi|347584326|gb|AEP00593.1| ATP-dependent DNA helicase RecQ [Bacillus coagulans 36D1]
Length = 724
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 161/287 (56%), Gaps = 14/287 (4%)
Query: 122 PILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI-LAVTATATPVV 180
P L L + LIA+DEAHC+SQWGHDFRPSYR + +L P+ LA+TATATP V
Sbjct: 124 PFLHLLENINVSLIAVDEAHCISQWGHDFRPSYRLIEKLISQFKPKPVTLALTATATPQV 183
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPT 240
+DIC LM+ + N + TGF R NL+ Q+ L + NQ S I+Y T
Sbjct: 184 KEDICRLLMIPEENTVATGFARENLHFQVVKGQNRDAFVLDYILKNANQ---SGILYTAT 240
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ + L +NGI+ YHA + +R F+ D I V+VAT AFGMGIDK +V
Sbjct: 241 RKETERIYNFLVKNGIRAGKYHAGMKEAERDSFQDRFLYDDISVMVATSAFGMGIDKSNV 300
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEH 359
R VIHY PK++ AYYQE GRAGRDG S C + D T+ +I Q D + E+
Sbjct: 301 RFVIHYNLPKNMEAYYQEAGRAGRDGEESDCILLFAPQDIHTQTFLIEQSANEDRKPGEY 360
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+K ++++ Y C ++++L++F E + P C NC
Sbjct: 361 AK--LRKMLDYCHTEGCFQQFILHYF-------GEKETQPCGKCGNC 398
>gi|118478170|ref|YP_895321.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis str. Al
Hakam]
gi|229185033|ref|ZP_04312223.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BGSC 6E1]
gi|376266680|ref|YP_005119392.1| ATP-dependent DNA helicase RecQ [Bacillus cereus F837/76]
gi|118417395|gb|ABK85814.1| ATP-dependent DNA helicase, RecQ-like protein [Bacillus
thuringiensis str. Al Hakam]
gi|228598508|gb|EEK56138.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BGSC 6E1]
gi|364512480|gb|AEW55879.1| ATP-dependent DNA helicase RecQ [Bacillus cereus F837/76]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|196043483|ref|ZP_03110721.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 03BB108]
gi|225864791|ref|YP_002750169.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 03BB102]
gi|196025792|gb|EDX64461.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 03BB108]
gi|225790780|gb|ACO30997.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 03BB102]
Length = 705
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|49479115|ref|YP_036901.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|301054339|ref|YP_003792550.1| ATP-dependent DNA helicase RecQ [Bacillus cereus biovar anthracis
str. CI]
gi|49330671|gb|AAT61317.1| ATP-dependent DNA helicase (RecQ) [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|300376508|gb|ADK05412.1| ATP-dependent DNA helicase RecQ [Bacillus cereus biovar anthracis
str. CI]
Length = 705
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPEEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|325660786|ref|ZP_08149414.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472860|gb|EGC76070.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
4_1_37FAA]
Length = 617
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 156/273 (57%), Gaps = 14/273 (5%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVI 181
L +R I ++++DEAHCVSQWG DFRPSY ++E L P+L A TATAT V
Sbjct: 125 FLGFAREAEISMVSVDEAHCVSQWGQDFRPSYLKIAEFFNYLGTRPVLSAFTATATAEVK 184
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPT 240
+DI L LRDP +I TGFDR NL +D A +T + + EG IIYC T
Sbjct: 185 EDIIALLNLRDPAMITTGFDRVNLRFCVEHPRDKFAA----VTAYLREHEGECGIIYCLT 240
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ + E+VC+ L + G++ YH+ + ++R+ F+ D +++VAT AFGMGIDK +V
Sbjct: 241 RKVVEEVCEKLIKEGLEVTRYHSGLGDEERRRNQEDFIYDRKQIMVATNAFGMGIDKSNV 300
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE----- 355
R VIHY PK++ +YYQE GRAGRDG+SS C Y D N + SE
Sbjct: 301 RFVIHYNMPKNMESYYQEAGRAGRDGMSSECILLYSGQDVITNQFFIEQAGEQSEFDPET 360
Query: 356 ---IQEHSKTMMKRVEKYLELRTCRRKYLLNHF 385
I+E + ++++ Y C R+Y+L +F
Sbjct: 361 AEMIRERERDRLQKMTYYCFTNECLREYMLRYF 393
>gi|333378586|ref|ZP_08470317.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
gi|332883562|gb|EGK03845.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
Length = 731
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 152/284 (53%), Gaps = 14/284 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I FL +I +I AIDEAHC+S+WGHDFRP YR + + + PI+A+TATATP V
Sbjct: 130 IDFLRQI-KISFYAIDEAHCISEWGHDFRPEYRRIRPIVNEIGKHPIIALTATATPKVQM 188
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + + ++ + F+R NLY K D + D+ K ++Q S IIYC ++
Sbjct: 189 DIQKNLGMVEADVFKSSFNRENLYYEVRSKTDKVDKDIIKY--IKSQGTKSGIIYCLSRK 246
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E+ ++L N I PYHA + R F+ + + V+VAT AFGMGIDKPDVR
Sbjct: 247 KVEEFAEILQTNNINALPYHAGLDPSTRSANQDAFLMEKVNVIVATIAFGMGIDKPDVRY 306
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK L YYQE GRAGRDG C FY D K Q QE K
Sbjct: 307 VIHYDMPKSLEGYYQETGRAGRDGGEGRCIAFYSFKDLQKLEKFMQGKPVAE--QEIGKQ 364
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ Y E CR+K LL++F + +K C NC
Sbjct: 365 LLLETAAYAETALCRKKVLLHYF---------GEEYKEKNCGNC 399
>gi|300728338|ref|ZP_07061703.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
gi|299774403|gb|EFI71030.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
Length = 726
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 17/287 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I A+DEAHC+S+WGHDFRP YR + + + + P++A+TATAT V DI
Sbjct: 131 FLKTV-KISFYAVDEAHCISEWGHDFRPEYRRIRPIISQIGNAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + + F+RPNLY K D+ +++ F Q G S IIYC +
Sbjct: 190 KRSLGIADAHEFKSSFNRPNLYYEVRPKTKDVD---KQIIMFIKQHPGKSGIIYCLARKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ ++L N I+ YHA + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELAEILKANDIKAAAYHAGLDSSTRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GR GRDG C FY D K F +E Q+ + +
Sbjct: 307 IHYDIPKSLEGYYQETGRVGRDGGEGKCIAFYAKKDLKKLEK-FMEGKPVAE-QDIGRQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++ Y E CRRK LL++F + D C CDNC+H
Sbjct: 365 LQETAAYAESSVCRRKMLLHYFG--------EEYEQDNCGNCDNCKH 403
>gi|302414652|ref|XP_003005158.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
gi|261356227|gb|EEY18655.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
Length = 1714
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 166/291 (57%), Gaps = 14/291 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R ++ +DEAHCVSQWGHDFRP Y+ L +LR P VPI+A+TATAT VI DI +
Sbjct: 944 RNQKLARFVVDEAHCVSQWGHDFRPDYKDLFKLRSNYPSVPIIALTATATTNVIVDIQHN 1003
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTKVICE 245
L + + F+RPNL A K+ ++ + +L + + NQ + IIY ++ E
Sbjct: 1004 LQIDKCQVFTQSFNRPNLTYAVERKEKGLIETIAQLIQSKYNNQ---TGIIYVLSRKNTE 1060
Query: 246 KVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
V L N GI YHA + +++ + + K IKVVVAT AFGMGIDKPDVR VI
Sbjct: 1061 DVATKLRDNYGISASHYHAAMKPEEKWNVQRRWQKGSIKVVVATIAFGMGIDKPDVRFVI 1120
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTM 363
H+ PK L YYQE GRAGRDG S C ++ D FT MI + ++ E +E + M
Sbjct: 1121 HHSLPKSLEGYYQETGRAGRDGKPSDCILYFGYGDVFTLKKMINDGDGSE-EQKERQRGM 1179
Query: 364 MKRVEKYL-ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+ R+ Y + + CRR +L +F G + VA+ +K CDNC H + E
Sbjct: 1180 LNRMSTYCDDQKDCRRVTILRYF-GEAFNVADC----NKTCDNCLHKGVFE 1225
>gi|229145390|ref|ZP_04273778.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-ST24]
gi|228638062|gb|EEK94504.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-ST24]
Length = 705
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 166/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YQDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|374316651|ref|YP_005063079.1| ATP-dependent DNA helicase RecQ [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352295|gb|AEV30069.1| ATP-dependent DNA helicase RecQ [Sphaerochaeta pleomorpha str.
Grapes]
Length = 619
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 160/296 (54%), Gaps = 17/296 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHC+S+WGHDFRP Y L+++R P VP+ TATAT V DDI L +R
Sbjct: 150 ISFFAIDEAHCLSEWGHDFRPDYLSLAQIRDAFPTVPLAGFTATATQQVQDDIIRILKMR 209
Query: 192 DPNIINTGFDRPNLYLAASVKQDDI--MADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
DP + F+R LY K + + +AD KL + E S I+Y ++ EK
Sbjct: 210 DPLTVRASFNRKELYYEVRQKTEILSQIADFIKLHS-----EESGIVYRISRKDVEKTAA 264
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L GI+ YHA +S ++R + LF D V+VAT AFGMGIDK ++R VIH
Sbjct: 265 YLKTQGIKALYYHAGLSREERAKNQDLFNNDKADVIVATIAFGMGIDKSNIRYVIHGDLS 324
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K++ YYQE GRAGRDGL+S C F+ D + F + D QE +K + R+ +
Sbjct: 325 KNMEGYYQETGRAGRDGLASDCIMFFGAGDVARQQY-FIEQIEDPAEQEKAKASLNRIVR 383
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVV 425
+ ++ CRRK +L +F E+ K CD C N + + + + RM++
Sbjct: 384 FATVQVCRRKQILEYF-------GEAHEGNCKSCDVC--NNVSKKVEATQDARMIL 430
>gi|443322394|ref|ZP_21051417.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
gi|442787869|gb|ELR97579.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
Length = 701
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 156/286 (54%), Gaps = 14/286 (4%)
Query: 124 LFLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVV 180
+FL++I + I +AIDEAHCVS+WG DFRP YR + LR P VP++A+TATAT V
Sbjct: 124 VFLTQIQQDVGISALAIDEAHCVSEWGQDFRPEYRQIKGLRQRYPQVPMVALTATATTRV 183
Query: 181 IDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPT 240
DI L L P + F+RPNLY K L K + +GS I+YC +
Sbjct: 184 RQDIIQQLGLIKPGVYVDSFNRPNLYYEVVSKDKRDYPQLLKYIKLQ---QGSGIVYCLS 240
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E+V L +GI + PYH + R F+ D ++V+VAT AFGMGI+KPDV
Sbjct: 241 RRRVEEVASRLQADGISSLPYHGGMDDTVRSVYQNRFIGDDVRVMVATIAFGMGINKPDV 300
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R V HY P++L +YYQE+GRAGRDG ++C F+ D + + + +D Q +
Sbjct: 301 RFVFHYDLPRNLESYYQEVGRAGRDGERAICVLFFSRGDIRTIDYLIKQK-SDPSAQRLA 359
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + Y E CRRK L++F E + CDNC
Sbjct: 360 RQGLSSMVDYAESTVCRRKIQLSYF-------GERFSGSCQNCDNC 398
>gi|383754954|ref|YP_005433857.1| putative ATP-dependent DNA helicase RecQ [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381367006|dbj|BAL83834.1| putative ATP-dependent DNA helicase RecQ [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 593
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 154/276 (55%), Gaps = 13/276 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++A+DEAHC+SQWGHDFRPSYR ++ LP P++ A TATATP V DDI + L L
Sbjct: 136 ISMVAVDEAHCLSQWGHDFRPSYRQIAPFIAGLPRRPLVSAFTATATPEVKDDIISLLHL 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
R P+I TGFDRPNLY +D R L + E + +IY T+ + + +
Sbjct: 196 RQPHIHVTGFDRPNLYFEVRRGEDKKKFIERYL---KTHSEEAGVIYAATRKEVDSLYEH 252
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA +S KQR + F+ D ++V+VAT AFGMGIDK +VR VIHY PK
Sbjct: 253 LLKKKFSVGRYHAGLSDKQRNQAQDDFLYDNVQVIVATNAFGMGIDKSNVRFVIHYNMPK 312
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ AYYQE GRAGRDG C Y D + + + E + H+ ++++ Y
Sbjct: 313 NIEAYYQEAGRAGRDGEPGTCILLYSPQDVMTQKYLIDVSTENEERKAHNLGTLQKMVDY 372
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C R +++++F +S D CDNC
Sbjct: 373 CHTPECLRHFIISYFGDASA---------DVTCDNC 399
>gi|71028986|ref|XP_764136.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351090|gb|EAN31853.1| hypothetical protein TP04_0501 [Theileria parva]
Length = 1044
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 174/311 (55%), Gaps = 17/311 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ L IDEAHCVSQWGH FR YR L L+ P+VPILA+TATATP V++DI L
Sbjct: 410 RLKLFVIDEAHCVSQWGHSFRKDYRKLCNLKPIFPNVPILAMTATATPEVVEDITAVLGF 469
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D ++ T +RPNL++ K + ++ K+ + G IIYC T C+++ +
Sbjct: 470 EDHVLLKTTINRPNLWIEVREKYTGYLEEIIKILRLTS---GCVIIYCLTTRDCDRLGEK 526
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L NG+ N YHA +++K R E L+ + ++++VAT AFGMGIDKP+VR ++H AP
Sbjct: 527 LEHNGLYNAVYHAKMNMKDRLESQRLWNEGEVRIMVATVAFGMGIDKPNVRLIMHTSAPF 586
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE-IQEHSKTMMKRVEK 369
L +YYQEIGRAGRDG S+ +Y DF ++ + N N+ + +S MM+ +
Sbjct: 587 SLLSYYQEIGRAGRDGKFSLTILWYNRGDFERHKNMNDTNHNNKKRYSVYSAEMMEFCKN 646
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVVEN 427
+ CRR +L F G T C CDNC N ++ V +++++
Sbjct: 647 KTK---CRRVMILEAF-GEEPTFG-------SCFGCDNCCLNLSAKIVDVTEEAQLILKF 695
Query: 428 SEVWMSTEARP 438
+ M +A+P
Sbjct: 696 VQAAMEFQAKP 706
>gi|229122366|ref|ZP_04251580.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 95/8201]
gi|228661215|gb|EEL16841.1| ATP-dependent DNA helicase RecQ [Bacillus cereus 95/8201]
Length = 705
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYASQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|167763147|ref|ZP_02435274.1| hypothetical protein BACSTE_01517 [Bacteroides stercoris ATCC
43183]
gi|167698441|gb|EDS15020.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 604
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 162/288 (56%), Gaps = 19/288 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMGILHQQFPHVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEG-STIIYCPTKV 242
L L P + FDRPNL L +VK+ + K + +F + G S IIYC ++
Sbjct: 180 IRQLHLNHPRTFISSFDRPNLSL--TVKRGYQQKEKSKTILDFIARHPGESGIIYCMSRS 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L ++GI+ YHA +S R E F+ D ++VV AT AFGMGIDK +VR
Sbjct: 238 KTESVAQMLQKHGIRTAVYHAGLSPSLRDEAQDDFINDRVQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY AD ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL----ILLTKFATESGQQNINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
++R+++Y E CRR+ LL++F ++ C CD C++
Sbjct: 354 KLQRMQQYAESDICRRRILLSYF---------GEIADHDCGNCDVCKN 392
>gi|255037353|ref|YP_003087974.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950109|gb|ACT94809.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 737
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 161/284 (56%), Gaps = 17/284 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL R+ +I +AIDEAHC+S+WGHDFRP YR + + + ++PI+A+TATATP V DI
Sbjct: 134 FLKRV-KISFVAIDEAHCISEWGHDFRPEYRRIHGIIENIGNLPIIALTATATPKVQQDI 192
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+L + + + F+R NLY K+D +R + N + + S I+YC ++
Sbjct: 193 RKNLQMEEAETFKSSFNRKNLYYEIRPKKDVKKQLIRYIRNNKGK---SGIVYCLSRKTV 249
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E+V ++L+ N ++ PYHA + R F+ + V+VAT AFGMGIDKPDVR VI
Sbjct: 250 EEVAELLNVNDVRALPYHAGLDANTRMANQDAFLNEECDVIVATIAFGMGIDKPDVRFVI 309
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDGL C FY D K F + +E +++++ ++
Sbjct: 310 HYDVPKSLEGYYQETGRAGRDGLEGNCLMFYSYDDIQKLEK-FNKDKTVTE-RDNARHLL 367
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y L CRR+ LL++F + C CDNC
Sbjct: 368 NEMVAYSTLGVCRRRQLLSYF---------GEYLEKDCGYCDNC 402
>gi|367043916|ref|XP_003652338.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
gi|346999600|gb|AEO66002.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
Length = 1637
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 161/292 (55%), Gaps = 11/292 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L R ++ I IDEAHCVS WGHDFRP Y+ L + RL VP++A+TATAT VI
Sbjct: 824 IETLYRKKKLARIVIDEAHCVSHWGHDFRPDYKALGQFRLAFTGVPVMALTATATSNVIA 883
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI +L + + + F+RPNLY KQ + + ++ ++ G S I+Y ++
Sbjct: 884 DIKHNLSMEGCEVFSQSFNRPNLYYEVIEKQTRFIQGMGEM--ITKKYPGQSGIVYTLSR 941
Query: 242 VICEKVCDVLS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
E L+ ++GI+ R YHA + + + E+ + + I VVVAT AFGMGIDKPDV
Sbjct: 942 KSAEGTASTLATKHGIKARYYHAMMDPESKAEVQRKWQEGEIHVVVATIAFGMGIDKPDV 1001
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEH 359
R VIH PK L YYQE GRAGRDG S CY ++ D MI + E +E
Sbjct: 1002 RFVIHQNLPKSLEGYYQETGRAGRDGQPSDCYLYFSYGDVPALRRMINEDKDKPKEEKER 1061
Query: 360 SKTMMKRVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
M+ R+ Y E TCRR +L +F G A+ DK CDNCR+ +
Sbjct: 1062 QHAMLNRMVTYCESTHTCRRVQILQYF-GERFDAAQCN---DK-CDNCRNGK 1108
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 156/286 (54%), Gaps = 13/286 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ I IDEAHCVSQWGHDFRP Y+ L ++ P VP++A+TATAT +V D+ +L +
Sbjct: 901 RLARIVIDEAHCVSQWGHDFRPDYKALGDVVRQFPGVPVIALTATATQLVRTDVVANLGI 960
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+ + F+RPNL K +I+ D+ KL E + S IIYC ++ CE+V +
Sbjct: 961 QGCRQFSQSFNRPNLSYEVLPKSKNIINDIAKLIK-EKHDKKSGIIYCLSRKSCEQVAEK 1019
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LS GI YHA + +R + + + V+VAT AFGMGIDK DVR V+H+ PK
Sbjct: 1020 LSNLGISAFHYHAGMEPAERSAVQRKWQHNEYHVIVATIAFGMGIDKADVRYVVHHTLPK 1079
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
L YYQE GRAGRDG S CY +Y+ D + E ++ M++ V ++
Sbjct: 1080 SLEGYYQETGRAGRDGKRSDCYLYYQYGDCRSLRKMIDDGEGSWEQKQRLHDMLRSVIQF 1139
Query: 371 LELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEML 412
E + CRR +L +F S P KC CDNCR +
Sbjct: 1140 CENKADCRRAQVLGYFSES--------FDPSKCKSTCDNCRSDSTF 1177
>gi|456968612|gb|EMG09788.1| ATP-dependent DNA helicase, RecQ family [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 588
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 154/285 (54%), Gaps = 18/285 (6%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLP-DVPILAVTATATPVVIDDICTSLMLRDP 193
IA+DEAHCVSQWGHDFRP YR + ELR P +P++A+TATAT VI DI SL L++P
Sbjct: 107 IAVDEAHCVSQWGHDFRPEYRKIHELREKYPKSIPVIALTATATSRVIKDISDSLGLKNP 166
Query: 194 NIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIYCPTKVICEKVC 248
+I F R NL + Q++I + L NF+ G I+YC T+ E V
Sbjct: 167 ILIKGSFYRENLSFSVRFPQNEISRENELLKLLAQGNFQKISSGRAIVYCATRQKVESVY 226
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L +NG + YHA + R+ + ++VAT AFGMG+D+PDVR VIHY
Sbjct: 227 GFLKKNGFKVGKYHAGRTDSSRERAQDGYNNGKTNILVATNAFGMGLDQPDVRLVIHYQI 286
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
P L +YYQE GRAGRDG S C FY +D I N ++ +T++ ++
Sbjct: 287 PASLESYYQEAGRAGRDGKPSDCILFYHPSDLVTQGFIIGKENN----RKGGETLLSHLK 342
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
+Y CR++ L ++F ++ P K CD C E +E
Sbjct: 343 EYSISNKCRQQALCSYFG--------EEILPCKICDICLEKESVE 379
>gi|29347258|ref|NP_810761.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339157|gb|AAO76955.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
Length = 620
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 156/286 (54%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 139 YLLRDMSISLFAIDEAHCISQWGHDFRPEYTQMGMLHQQFPQVPIIALTATADKITREDI 198
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L VK+ + K L E S IIYC ++
Sbjct: 199 IRQLHLIQPRTFISSFDRPNISL--DVKRGFQAKEKNKAILEFIHRHREESGIIYCMSRN 256
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 257 KTETVAQMLQKQGIRCGVYHAGLSPQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 316
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ +S Q +
Sbjct: 317 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFATESNQQTINLE 372
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 373 KLQRMQQYAEADICRRRILLSYF-------GETSTEDCGNCDVCKN 411
>gi|229190913|ref|ZP_04317904.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ATCC 10876]
gi|228592581|gb|EEK50409.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ATCC 10876]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDIDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|330996065|ref|ZP_08319959.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
gi|329574062|gb|EGG55640.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
Length = 727
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 120 DVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV 179
D + FL + +I AIDEAHC+S+WGHDFRP YR + + + P++A+TATAT
Sbjct: 126 DENVDFLRNV-KISFYAIDEAHCISEWGHDFRPEYRRIRPIINDIGTAPVIALTATATDK 184
Query: 180 VIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYC 238
V DI +L + D + F+RPNLY K ++ D+ F Q G S IIY
Sbjct: 185 VRGDIKKNLGMTDAKEFKSSFNRPNLYYEVRNKTKNVDKDI---IRFIKQRPGKSGIIYA 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
++ E++ ++L N I R YHA + R + F+ + I V+VAT AFGMGIDKP
Sbjct: 242 LSRKRVEELAEILRANDINARAYHAGMDSATRSQTQDDFIMERIDVIVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEI 356
DVR VIHY PK L YYQE GRAGRDG +C T+Y D K M +P
Sbjct: 302 DVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCVTYYAYKDLQKLEKFMEGKPVAE---- 357
Query: 357 QEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH------ 408
Q+ + ++ Y E CRRK+LL++F + + C CDNC H
Sbjct: 358 QDIGRQLLSETAAYAESSVCRRKFLLHYFG--------EEYHEENCGNCDNCLHPKKKVE 409
Query: 409 -----NEMLELEQVPRGGRMVVENSEVWMSTEARPGREAFEFLPH 448
E+LE+ Q V EN + + G+E E + H
Sbjct: 410 AKSQLKELLEVVQA------VKENFKADYIIDVLVGKETDEVIAH 448
>gi|423419182|ref|ZP_17396271.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG3X2-1]
gi|401105788|gb|EJQ13755.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG3X2-1]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC++L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICSTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRDSQMVL 413
>gi|427707114|ref|YP_007049491.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7107]
gi|427359619|gb|AFY42341.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7107]
Length = 718
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 164/300 (54%), Gaps = 15/300 (5%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R +SE LP D+ + I AIDEAHCVS+WGHDFRP YR L LR P VP
Sbjct: 119 RLMSERFLPFLDL----VHHQVGISTFAIDEAHCVSEWGHDFRPEYRQLRSLRSRYPHVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
++A+TATAT V DI + L+ P+I F+R NLY K A+L +L
Sbjct: 175 MIALTATATERVRSDIIQQIGLKQPSIHIASFNRQNLYYEVRPKTKYAYAELLELIR--- 231
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
+ +GS IIYC T+ +++ L + + YHA +S ++R + F++D +V+VAT
Sbjct: 232 EIDGSAIIYCLTRKKVDELTFKLQNDKVSVLAYHAGLSDEERSKNQTRFIRDDARVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIH+ P++L +YYQE GRAGRDG S C F+ D
Sbjct: 292 IAFGMGINKPDVRLVIHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFGDIKTIEWSIN 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
D++ Q +K ++++ Y E CRR L++F E + CDNCRH
Sbjct: 352 QK-TDAQEQLIAKQQLRQMIDYAEGTDCRRTIQLSYF-------GERFLGNCANCDNCRH 403
>gi|229070293|ref|ZP_04203543.1| ATP-dependent DNA helicase RecQ [Bacillus cereus F65185]
gi|228712857|gb|EEL64782.1| ATP-dependent DNA helicase RecQ [Bacillus cereus F65185]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC ++
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTIE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|365119359|ref|ZP_09337481.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363648680|gb|EHL87834.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 709
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 157/281 (55%), Gaps = 14/281 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R I L AIDEAHC+SQWGHDFRP Y LS L+ P VP++A+TATA + +DI
Sbjct: 128 LLREMNISLFAIDEAHCISQWGHDFRPEYNRLSVLKKYFPKVPLMALTATADKLTREDIV 187
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
T L + +P + + FDRPNL L+ + L+ E S IIYC ++ E
Sbjct: 188 TQLAMDNPQVFISSFDRPNLTLSVRKNLNKKQKLSAILSFIEQHPRQSGIIYCMSRNSTE 247
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ LS+ GI YHA +S ++R+ F+ D ++++ AT AFGMGIDK +VR VIH
Sbjct: 248 ILVRELSQYGISVTAYHAGLSSRERETAQQAFLNDRVQIICATIAFGMGIDKSNVRWVIH 307
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK + YYQEIGRAGRDG+ FY D ++ +S ++ + ++
Sbjct: 308 YNMPKSIECYYQEIGRAGRDGMKGDTLLFYSLGDV----VMLSKFAEESGQKKINLEKLR 363
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
R+++Y E CRR+ LL++F G +V D C NC
Sbjct: 364 RMQQYAESPICRRRILLSYF-GETV---------DHDCGNC 394
>gi|228959047|ref|ZP_04120748.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423627884|ref|ZP_17603633.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD154]
gi|228800708|gb|EEM47624.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401271181|gb|EJR77199.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD154]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDIDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|397779827|ref|YP_006544300.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396938329|emb|CCJ35584.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 780
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 156/276 (56%), Gaps = 10/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L+A+DEAHC+S+WGH FRP YR LS L+ P+VP++A+TATA P V DI L L
Sbjct: 168 VTLVAVDEAHCISEWGHQFRPEYRQLSVLKEQFPEVPMIALTATAIPEVRQDIIRQLSLA 227
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
DP + +R NL + K+D + L + N+ S I+Y +K E++ + L
Sbjct: 228 DPAVYVGSSNRENLRYTVAGKKDAYPQLIDYLRSNPNR---SGIVYFSSKKRTEEIAERL 284
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+G++ PYHA + R + F++D I VV AT AFGMGIDKPDVR VIHY PK
Sbjct: 285 RNDGVRALPYHADLPDNYRHRVQEQFIRDEIDVVCATNAFGMGIDKPDVRFVIHYDMPKS 344
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNN-MIFQPNLNDSEIQEHSKTMMKRVEKY 370
L AY QE GRAGRDG +S C FY D KN M+ + +L+ ++ + + + +
Sbjct: 345 LEAYAQETGRAGRDGEASDCILFYSPGDRRKNQVMLERDSLDRPDLYPVAVQKLNDMAAF 404
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E CRR+YLL +F + V P CD C
Sbjct: 405 CETTRCRREYLLRYFGETFTGV------PCGGCDIC 434
>gi|423482562|ref|ZP_17459252.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG6X1-2]
gi|401143866|gb|EJQ51400.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG6X1-2]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC++L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICSTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|299820877|ref|ZP_07052766.1| ATP-dependent helicase RecQ [Listeria grayi DSM 20601]
gi|299817898|gb|EFI85133.1| ATP-dependent helicase RecQ [Listeria grayi DSM 20601]
Length = 593
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 151/276 (54%), Gaps = 12/276 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVIDDICTSLML 190
I L+A+DEAHC+SQWGHDFRPSYR LS + L P PI+A+TATAT V DIC L +
Sbjct: 132 ISLMAVDEAHCISQWGHDFRPSYRVLSNVLAELQPKPPIIALTATATEDVARDICNQLGI 191
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
N + TGF R NL QD D L + E + IIY T+ E++ +
Sbjct: 192 TYNNRVQTGFSRENLSFQVVKGQD---KDKYLLDYLKKNHEQAGIIYASTRKEVERLTAI 248
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L++NGI YH +S K R E F+ D I V+VAT AFGMGI+K +VR VIHY P+
Sbjct: 249 LNKNGIAAGQYHGGMSDKARAEYQEQFLYDDITVIVATNAFGMGINKSNVRFVIHYNIPR 308
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ AYYQE GRAGRDGL S C + D + + E +++ ++++ Y
Sbjct: 309 NMEAYYQEAGRAGRDGLPSDCILLFAPQDAHIQQFLIDQSELSEEYKQNEYLKLRKMTGY 368
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C +KY++ +F + P K C NC
Sbjct: 369 GYTEICLQKYIVQYFG--------DEAPECKHCSNC 396
>gi|218232745|ref|YP_002367534.1| ATP-dependent DNA helicase RecQ [Bacillus cereus B4264]
gi|218160702|gb|ACK60694.1| ATP-dependent DNA helicase RecQ [Bacillus cereus B4264]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDIDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|376003245|ref|ZP_09781059.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
gi|375328405|emb|CCE16812.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
Length = 739
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 158/296 (53%), Gaps = 21/296 (7%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL R+ I + IDEAHCVS WGHDFRP YR + ++R P VP +A+TATAT V
Sbjct: 135 FLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTATATERVR 194
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI ++L+ P + F R NLY KQ +L GS IIYC ++
Sbjct: 195 FDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPK--KRFTQLLKVIESMSGSGIIYCSSR 252
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L + IQ PYHA ++ R E H F++D ++++VAT AFGMGIDKPDVR
Sbjct: 253 KRVEEVALKLQHHNIQALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVR 312
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
VIHY PK L YYQE GRAGRDG + C F+ D + + P++++ I
Sbjct: 313 FVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQRI--- 369
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
++ +++V Y E CR + L +F + P C CDNC H +E
Sbjct: 370 ARQQLRQVIDYAESTECRHRIQLRYF---------GEEFPGNCGTCDNCCHQRPME 416
>gi|88803234|ref|ZP_01118760.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
gi|88780800|gb|EAR11979.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
Length = 727
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 150/263 (57%), Gaps = 5/263 (1%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ FL R +I +AIDEAHC+S+WGHDFRP YR L + + DVP++ +TATAT V +
Sbjct: 125 VAFL-RTQKISFVAIDEAHCISEWGHDFRPEYRNLKHIIKAIDDVPVICLTATATEKVQE 183
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI +L + D N F+R NL+ K ++ D+ + + + S IIYC ++
Sbjct: 184 DILKTLGITDANRFKASFNRANLFYEIRPKTKEVEKDIIRFV--KQRVGKSGIIYCLSRK 241
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E+V +L NG+ PYHA + K R +F+ + +VVAT AFGMGIDKPDVR
Sbjct: 242 KVEEVAQILQVNGLNAVPYHAGLDAKTRVRHQDMFLMEDCDIVVATIAFGMGIDKPDVRF 301
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIH+ PK L +YYQE GRAGRD C FY D K F + +E QE
Sbjct: 302 VIHHDIPKSLESYYQETGRAGRDDGEGYCLAFYAYKDIEKLEK-FMSSKPVAE-QEIGHA 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRKYLL++F
Sbjct: 360 LLQEVVGYAETSMNRRKYLLHYF 382
>gi|423523321|ref|ZP_17499794.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuA4-10]
gi|401171563|gb|EJQ78789.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuA4-10]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC++L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHSILDYLPEKPLVLALTATATPQVRDDICSTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|296503352|ref|YP_003665052.1| ATP-dependent DNA helicase recQ [Bacillus thuringiensis BMB171]
gi|296324404|gb|ADH07332.1| ATP-dependent DNA helicase recQ [Bacillus thuringiensis BMB171]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 166/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YQDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|228921484|ref|ZP_04084807.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423581092|ref|ZP_17557203.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD014]
gi|423636460|ref|ZP_17612113.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD156]
gi|228838257|gb|EEM83575.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401215857|gb|EJR22572.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD014]
gi|401274811|gb|EJR80780.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD156]
Length = 705
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDIDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|298387431|ref|ZP_06996983.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_14]
gi|298259638|gb|EFI02510.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_14]
Length = 601
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 156/286 (54%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 120 YLLRDMSISLFAIDEAHCISQWGHDFRPEYTQMGMLHQQFPQVPIIALTATADKITREDI 179
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L VK+ + K L E S IIYC ++
Sbjct: 180 IRQLHLIQPRTFISSFDRPNISL--DVKRGFQAKEKNKAILEFIHRHREESGIIYCMSRN 237
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 238 KTETVAQMLQKQGIRCGVYHAGLSPQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 297
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ +S Q +
Sbjct: 298 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFATESNQQTINLE 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 354 KLQRMQQYAEADICRRRILLSYF-------GETSTEDCGNCDVCKN 392
>gi|383125120|ref|ZP_09945776.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|382983453|gb|EIC72782.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 620
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 156/286 (54%), Gaps = 15/286 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
+L R I L AIDEAHC+SQWGHDFRP Y + L P VPI+A+TATA + +DI
Sbjct: 139 YLLRDMSISLFAIDEAHCISQWGHDFRPEYTQMGMLHQQFPQVPIIALTATADKITREDI 198
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKV 242
L L P + FDRPN+ L VK+ + K L E S IIYC ++
Sbjct: 199 IRQLHLIQPRTFISSFDRPNISL--DVKRGFQAKEKNKAILEFIHRHREESGIIYCMSRN 256
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V +L + GI+ YHA +S + R E F+ D I+VV AT AFGMGIDK +VR
Sbjct: 257 KTETVAQMLQKQGIRCGVYHAGLSPQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRW 316
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK + ++YQEIGRAGRDGL S FY D ++ +S Q +
Sbjct: 317 VIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL----ILLTKFATESNQQTINLE 372
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
++R+++Y E CRR+ LL++F E+ CD C++
Sbjct: 373 KLQRMQQYAEADICRRRILLSYF-------GETSTEDCGNCDVCKN 411
>gi|398343504|ref|ZP_10528207.1| DNA helicase [Leptospira inadai serovar Lyme str. 10]
Length = 624
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 174/336 (51%), Gaps = 28/336 (8%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDD 183
+S+ P + L+A+DEAHCVSQWGHDFRP YR L LR P+ +P +A+TATAT V D
Sbjct: 138 LVSKFP-LGLVAVDEAHCVSQWGHDFRPEYRKLHTLRSAFPENIPWVALTATATDRVKKD 196
Query: 184 ICTSLMLRDPNIINTGFDRPNLYL------AASVKQDDIMADLRKLTNFENQFEGSTIIY 237
IC SL L+DP + + RPNL + K+ ++++ L NF G IIY
Sbjct: 197 ICDSLGLKDPASVQGTYARPNLKFRIQFPESERDKEKELLSILEN-GNFRKSNSGKAIIY 255
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C T+ + V ++L ++G + YHA + R++ + V+VAT AFGMG+D
Sbjct: 256 CATRSKVDDVYEMLKKSGYKVGKYHAGRTDSSREKTQDGYTSGKTNVLVATNAFGMGLDS 315
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
P+VR V+HY P L +YYQE GRAGRDG +S C F+ T D + N + N
Sbjct: 316 PNVRLVLHYQVPSSLESYYQEAGRAGRDGKNSDCVLFFHTGDLSIQNFLLSKEAN----Y 371
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE------M 411
+ +T++ V+ Y CR++ L +F + P CD+C ++
Sbjct: 372 KGGETLLSHVKSYASSSVCRQQLLCGYFG--------ETIDPCGVCDSCLESDPSDRENF 423
Query: 412 LELEQVPRGGRMVVENSEVWMSTEARPGREAFEFLP 447
LE E++ + R S + ++E + E P
Sbjct: 424 LERERI-KATRKKSRESHTFETSEVQSAEGLLEEYP 458
>gi|363580415|ref|ZP_09313225.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium HQM9]
Length = 728
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 9/257 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I +A+DEAHC+S+WGHDFRP YR L + + D +PI+ +TATATP V +DI +L +
Sbjct: 136 ISFLAVDEAHCISEWGHDFRPEYRNLRRIIKGIGDNIPIIGLTATATPKVQEDILKNLGI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
N F+RPNL+ K ++ D+ + + E S IIYC ++ E++
Sbjct: 196 SGANTFKASFNRPNLFYEVRPKTANVETDIIRFV--KQNSEKSGIIYCLSRKKVEELAQA 253
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L NGI PYHA + K R + +F+ + I VVVAT AFGMGIDKPDVR V+HY PK
Sbjct: 254 LQVNGIIAVPYHAGLDAKTRAKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVVHYDIPK 313
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRVE 368
+ +YYQE GRAGRDG C +Y D K M +P QE +++ V
Sbjct: 314 SIESYYQETGRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAE----QEIGNALLQEVV 369
Query: 369 KYLELRTCRRKYLLNHF 385
+ E RRK++L++F
Sbjct: 370 AFAETSISRRKFILHYF 386
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 160/285 (56%), Gaps = 13/285 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ + IDEAHCVS WGHDFRP Y+ L E R PDVPI+A+TATAT V +D+ L +
Sbjct: 575 KLARLVIDEAHCVSHWGHDFRPDYKRLGEFRKKYPDVPIMALTATATTRVREDVLHQLQI 634
Query: 191 RDPNIINTGFDRPNL-YLAASVKQDDIMADLRKLTN--FENQFEGSTIIYCPTKVICEKV 247
+ + F+RPNL Y K MA++ L ++NQ S I+YC ++ C+
Sbjct: 635 SGTKLFLSSFNRPNLLYKVVPKKGKSAMAEIANLIKEKYKNQ---SGIVYCLSRKECDNT 691
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ GI+ YHA +S +R ++ ++ + + +V AT AFGMGIDKPDVR V HY
Sbjct: 692 ATYMCNEGIKAISYHAGLSDPKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYS 751
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK-- 365
PK + YYQE GRAGRDG +S C+ +Y D + + + L+DS E K M+
Sbjct: 752 LPKSIEGYYQESGRAGRDGKTSHCFLYYSYQDMHRIRKLIE--LDDSGNHESKKVHMQNL 809
Query: 366 -RVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
R+ Y E + CRR LN+F G + + + CDNC++
Sbjct: 810 FRIVSYCENKADCRRTLQLNYF-GETFDDNKCISNKETACDNCQN 853
>gi|359458485|ref|ZP_09247048.1| ATP-dependent DNA helicase RecQ [Acaryochloris sp. CCMEE 5410]
Length = 739
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 156/296 (52%), Gaps = 21/296 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ A+DEAHCVS+WGHDFRP YR L+E+R VP+ +TATAT V DI L LR
Sbjct: 146 LAAFAVDEAHCVSEWGHDFRPEYRRLAEVRQRYAQVPVYTLTATATERVRQDIIQQLQLR 205
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P + F+RPNLY K ADL + Q G I+YC ++ ++ L
Sbjct: 206 QPFVHVASFNRPNLYYEVRPKSRQAYADLYREIRQHGQDSG--IVYCLSRREVNEISARL 263
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+GI+ PYHA +S R F++D ++V+VAT AFGMGIDKPDVR VIHY P++
Sbjct: 264 QGDGIRALPYHAGMSDSARTLNQERFIRDDVQVMVATVAFGMGIDKPDVRFVIHYNLPRN 323
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ---------PNLNDSEIQEHSKT 362
+ YYQE GRAGRDG S C F+ T D + + P N+ I ++
Sbjct: 324 IEGYYQEAGRAGRDGEPSKCLLFFSTKDIHTLEWLIERKVDPETGNPLENEQRI---ARQ 380
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVP 418
+++V Y E CRR L +F E+ CDNC H + +E +P
Sbjct: 381 QLRQVIDYAESTVCRRTVQLGYF-------GETFGGDCGGCDNCCHPKPVEDWTIP 429
>gi|262273198|ref|ZP_06051014.1| ATP-dependent DNA helicase RecQ [Grimontia hollisae CIP 101886]
gi|262222776|gb|EEY74085.1| ATP-dependent DNA helicase RecQ [Grimontia hollisae CIP 101886]
Length = 616
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 157/287 (54%), Gaps = 19/287 (6%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ + L IA+DEAHC+SQWGHDFRP Y L L+ P VP++A+TATA
Sbjct: 134 FIERLQAVTLGLIAVDEAHCISQWGHDFRPEYAQLGSLKQHFPGVPVMALTATADDTTRQ 193
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DIC L L DP+I FDRPN+ K L +LT F Q S I+YC ++
Sbjct: 194 DICQRLALVDPHIYLGSFDRPNIRYTLVEKHKP----LAQLTQFLATQSGQSGIVYCNSR 249
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V + L + I+ YHA ++ QR + F +D +++VVAT AFGMGI+KP+VR
Sbjct: 250 KRVEQVAEKLMGSNIRAAAYHAGMTADQRAWVQEAFQRDDVQIVVATVAFGMGINKPNVR 309
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
V+HY P+++ +YYQE GRAGRDGL + FY +D + + P+ ++ H
Sbjct: 310 FVVHYDIPRNIESYYQETGRAGRDGLPAEAILFYDPSDIGWLHRCLEEKPDGEQKRVESH 369
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E TCRR LLN+F E + P CD C
Sbjct: 370 KLNAMG---AFAEALTCRRLVLLNYF-------GEYRNEPCGNCDIC 406
>gi|269859903|ref|XP_002649675.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066870|gb|EED44340.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 156/281 (55%), Gaps = 15/281 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ IDEAHCVSQWGHDFRP Y+ LS+LR P VPI+A+TATAT V DI L +
Sbjct: 397 KVCRFVIDEAHCVSQWGHDFRPDYKELSKLRQSYPTVPIIALTATATKKVEVDIINVLNI 456
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
++ I + F+RPNL K + D+ N + + IIYC +K CEK+ +
Sbjct: 457 QNCKIFKSSFNRPNLIYRVLPKTATTILDIVSFIN-SHYADSPGIIYCTSKKECEKMAEE 515
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LSR+ ++ YH +S R I + +++AT AFGMGIDKPDVR VIHY PK
Sbjct: 516 LSRD-LKITYYHGGLSKYDRIRIQEQWNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPK 574
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS-EIQEHSKTMMKRVEK 369
L YYQE GRAGRDGL S+C +Y AD N + + N + E ++ K + V K
Sbjct: 575 SLEGYYQETGRAGRDGLESICILYYSYADTKVINFLITRSYNTTAEQKQRQKEELFNVVK 634
Query: 370 YLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNC 406
Y E + CRRK +L +F + D C CDNC
Sbjct: 635 YCENKVECRRKQVLKYFN--------EEFSSDMCNKTCDNC 667
>gi|113461847|ref|YP_719916.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
gi|112823890|gb|ABI25979.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
Length = 624
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 160/279 (57%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ IA+DE HC+SQWGHDFRP Y L L+ PD PI+A+TATA DI L L
Sbjct: 151 KVSFIAVDETHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADQATRQDILIHLKL 210
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+P+I FDRPN+ + K + +L+ F + +G S IIYC ++ E++ +
Sbjct: 211 SNPHIYIGSFDRPNIRYSLVEK----FKPMEQLSQFIAKQKGKSGIIYCNSRNKVERIAE 266
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + GI YHA +S +QR+ + F D +++VVAT AFGMGI+K +VR V H+ P
Sbjct: 267 SLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQIVVATIAFGMGINKSNVRFVAHFDLP 326
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + AYYQE GRAGRD L + FY+ AD+ + ++ +P++ +I+ H ++ +
Sbjct: 327 RSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWLQKVLLEKPDIPQRQIELHK---LQSI 383
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ E + CRR LLN+F E Q P CD C
Sbjct: 384 GEFAESQICRRLVLLNYF-------GEYQQKPCNNCDIC 415
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 163/297 (54%), Gaps = 14/297 (4%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP Y+ L LR P VP +A+TATATP V DI L + +P
Sbjct: 656 IDEAHCVSQWGHDFRPDYKKLKCLRNNYPKVPTMALTATATPRVRTDILHQLGMTNPKWF 715
Query: 197 NTGFDRPNLYLAASVKQ-----DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ F+RPNL + K+ D+I+A + +T F+N I+YC ++ CE +
Sbjct: 716 MSSFNRPNLRYSIISKKGKNCSDEIVAMI--MTKFKNT---CGIVYCLSRKDCEDYAAHM 770
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+NGI+ YHA +S QR G ++ D + V+ AT AFGMGIDKP+VR VIH PK
Sbjct: 771 KKNGIKVLSYHAGLSDTQRSNCQGKWISDEVHVICATIAFGMGIDKPNVRFVIHAALPKS 830
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIF-QPNLNDSEIQEHSKTMMKRVEKY 370
+ +YYQE GRAGRDG + C FY AD + +F Q N N I H + K V +
Sbjct: 831 IESYYQESGRAGRDGEIADCILFYHYADMHRIRKMFEQDNPNPQVISTHMDNLFKMVA-F 889
Query: 371 LELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
E RT CRR LN+F G + CDNCR + + V + +++
Sbjct: 890 CENRTDCRRSLQLNYF-GEIFDRQQCISNKIATCDNCRSKAEITMLDVTEDAKEIMK 945
>gi|325263257|ref|ZP_08129992.1| ATP-dependent DNA helicase RecQ [Clostridium sp. D5]
gi|324031650|gb|EGB92930.1| ATP-dependent DNA helicase RecQ [Clostridium sp. D5]
Length = 708
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 160/295 (54%), Gaps = 25/295 (8%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVI 181
FLS + I ++A+DEAHC+SQWG DFRPSY + E LP P I+A TATAT VV
Sbjct: 121 FLSLVSNVDISMVAVDEAHCISQWGQDFRPSYLKIVEFINMLPKRPVIVAYTATATKVVK 180
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
+DI L L+DP ++ TG+DR NLY A K + MA+L L E + S IIYC T+
Sbjct: 181 EDISCILGLQDPTVVVTGYDRKNLYFAVK-KPKNKMAEL--LAYMEKNGDKSGIIYCNTR 237
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V + L + G YHA +S RK+ F+ D+ ++VAT AFGMGIDK +VR
Sbjct: 238 KNVEEVHEALLKEGYLTAKYHAGLSDSARKQNQEDFIYDIKPIMVATNAFGMGIDKSNVR 297
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE------ 355
VIHY PKD+ +YYQE GRAGRDG S C Y D N + + E
Sbjct: 298 FVIHYNMPKDIESYYQEAGRAGRDGEPSECILLYSGQDVKINEFLISKQTENEELDYEER 357
Query: 356 --IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
I+E ++++ Y C R Y+L +F + + C C+NC
Sbjct: 358 ELIRERDNERLRKMTFYCVTNECLRDYILRYF---------GEYGGNYCGNCENC 403
>gi|404497566|ref|YP_006721672.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|418065091|ref|ZP_12702466.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
gi|78195168|gb|ABB32935.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|373562723|gb|EHP88930.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
Length = 601
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 153/284 (53%), Gaps = 13/284 (4%)
Query: 125 FLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ I L AIDEAHCVSQWGHDFRP Y L LR P VP++A+TATA
Sbjct: 124 FLERLREIPVALFAIDEAHCVSQWGHDFRPEYVGLGRLRGLFPGVPVIALTATADVQTRS 183
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L LRD + TGFDRPN+ KQ + L N+ + + I+Y ++
Sbjct: 184 DIIDRLGLRDAQVYVTGFDRPNIRYTVVDKQKPFH---QLLAFLGNRPQDAGIVYALSRK 240
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E+V L GI+ YHA ++ +R + F++D ++VVVAT AFGMGIDKP+VR
Sbjct: 241 RVEEVAGKLRDAGIEAAAYHAGLADGERGRVQEAFLRDDVRVVVATVAFGMGIDKPNVRF 300
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK++ +YYQE GRAGRDGL + + D + + + N +++
Sbjct: 301 VVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIAVSRSLIESGNNPEQVRIELHK 360
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ V + E TCRR+ LL +F E P CD C
Sbjct: 361 LNAMV-GFAEAGTCRREALLGYF-------GERLAEPCGNCDLC 396
>gi|423642180|ref|ZP_17617798.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD166]
gi|401277123|gb|EJR83067.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD166]
Length = 705
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDIDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|317471202|ref|ZP_07930570.1| ATP-dependent DNA helicase RecQ [Anaerostipes sp. 3_2_56FAA]
gi|316901308|gb|EFV23254.1| ATP-dependent DNA helicase RecQ [Anaerostipes sp. 3_2_56FAA]
Length = 616
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 17/285 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I +A+DEAHCVSQWG DFRPSY + LP P+L A TATAT V +D+ L L
Sbjct: 133 ISFLAVDEAHCVSQWGQDFRPSYLKILSFLEKLPRRPVLGAYTATATVEVKEDVLDILNL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
RDP ++ TGFDR NL+ +D L E + GS+ I+YC ++ E+VC
Sbjct: 193 RDPLVVTTGFDRANLFFGVKKPRDKYRELESYLREKEEKMPGSSGIVYCLSRKSVEEVCY 252
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L G YHA +S +R+E F+ D +++VAT AFGMGIDKPDVR VIHY P
Sbjct: 253 QLREAGFSVTRYHAGLSDTERRENQDDFIYDRRQIMVATNAFGMGIDKPDVRFVIHYNMP 312
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM------ 363
K++ +YYQE GRAGRDG + C ++ AD N + + ++ E+ E ++ +
Sbjct: 313 KNMESYYQEAGRAGRDGEPAECILYFGAADQRTNRFLIEHGEDNQELDEETRRIVMEKDL 372
Query: 364 --MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+K++ Y +C R Y+L++F S AE Q C NC
Sbjct: 373 GRLKQMTFYCATSSCLRHYILDYFGEES--SAECQ-----NCSNC 410
>gi|229110265|ref|ZP_04239839.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock1-15]
gi|423586762|ref|ZP_17562849.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD045]
gi|423648707|ref|ZP_17624277.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD169]
gi|228673251|gb|EEL28521.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock1-15]
gi|401230280|gb|EJR36788.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD045]
gi|401284205|gb|EJR90071.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD169]
Length = 705
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INKENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDIDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|423396692|ref|ZP_17373893.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG2X1-1]
gi|401651268|gb|EJS68833.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG2X1-1]
Length = 705
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 159/281 (56%), Gaps = 20/281 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVVKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L R G+ YHA +S R E LF++D + V++AT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGRAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMIATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y C + ++L +F + P + C C NC
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNC 396
>gi|401827051|ref|XP_003887618.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
gi|392998624|gb|AFM98637.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
Length = 766
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 158/293 (53%), Gaps = 16/293 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R R+ IDEAHCVSQWGHDFRP Y+ L +R P VPI+A+TATAT V DI
Sbjct: 353 LVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRARYPSVPIIALTATATKKVELDIL 412
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTKVIC 244
+L +R F+R NL K + D+ ++ + F + IIYC +K C
Sbjct: 413 ENLGIRGCETFKMSFNRSNLRYEVRAKTSTVELDI--VSFVQTHFPDCCGIIYCTSKKEC 470
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + D L + ++ YHA +S +R + + K KV+VAT AFGMGIDK DVR VI
Sbjct: 471 EMISDRLKKY-MKTAFYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVI 529
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDGL SVC FY D K + + + E ++ + +
Sbjct: 530 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQREDL 589
Query: 365 KRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLE 413
+ V ++ E +T CRR +L HF + P C CDNCR +++
Sbjct: 590 EAVIQFCENKTDCRRMQVLAHFG--------EKFDPQMCKKTCDNCRREAIVK 634
>gi|308275177|emb|CBX31774.1| ATP-dependent DNA helicase recQ [uncultured Desulfobacterium sp.]
Length = 604
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 11/272 (4%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+AIDEAHC+S+WGHDFRP YR L+ +R P +A+TATAT V +DI +SL N
Sbjct: 135 MAIDEAHCISEWGHDFRPEYRKLAGVRTHFPSATCIALTATATLRVREDIKSSLGFDVSN 194
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
F+R NLYL + K + + L+ + S IIYC ++ +K+ ++L
Sbjct: 195 EFIASFNRQNLYLNITPKDKPVSQTIDFLSGHSGE---SGIIYCFSRKQVDKLYEILQDG 251
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
G RPYHA +S K+R LF+KD ++++VAT AFGMGI+KP+VR VIH+ PK++
Sbjct: 252 GYSVRPYHAGLSDKERAVNQELFIKDDVQIIVATIAFGMGINKPNVRFVIHFDLPKNIET 311
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR 374
YYQEIGRAGRDGL + C + D K D ++ + + + ++ E
Sbjct: 312 YYQEIGRAGRDGLKAECVLLFGYGDIRKIKYFINQKSEDEQLV--ANIHLNALLQFAETS 369
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
CRR+ LLN+F + Q+ CDNC
Sbjct: 370 VCRRRPLLNYFG------EDYQIEKCDMCDNC 395
>gi|408370738|ref|ZP_11168512.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
gi|407743730|gb|EKF55303.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
Length = 733
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 150/262 (57%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR + + L D +PI+A+TATAT V +DI
Sbjct: 134 RTVKISFVAVDEAHCISEWGHDFRPEYRNIRTIIQRLGDDIPIIALTATATEKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
+L + N+ F+RPNLY K ++ D+ F Q G S IIYC ++ E
Sbjct: 194 NLGIGKANVFKASFNRPNLYYEVRPKTKNVDVDI---IRFVKQNTGKSGIIYCLSRKKVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ L NGI+ PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQTLEVNGIKAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK + +YYQE GRAGRDG C FY D K M +P QE +
Sbjct: 311 HDIPKSIESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAE----QEIGHAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ + Y E RR Y+L++F
Sbjct: 367 LQDMVAYAETSMSRRMYILHYF 388
>gi|228939936|ref|ZP_04102512.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972828|ref|ZP_04133425.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979410|ref|ZP_04139744.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis Bt407]
gi|384186880|ref|YP_005572776.1| ATP-dependent DNA helicase recQ [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410675184|ref|YP_006927555.1| putative ATP-dependent DNA helicase RecQ [Bacillus thuringiensis
Bt407]
gi|452199240|ref|YP_007479321.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228780310|gb|EEM28543.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis Bt407]
gi|228786879|gb|EEM34861.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819727|gb|EEM65776.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940589|gb|AEA16485.1| ATP-dependent DNA helicase recQ [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409174313|gb|AFV18618.1| putative ATP-dependent DNA helicase RecQ [Bacillus thuringiensis
Bt407]
gi|452104633|gb|AGG01573.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 705
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC N E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDNR--ESIDVTRESQMVL 413
>gi|443898809|dbj|GAC76143.1| hypothetical protein PANT_19d00137 [Pseudozyma antarctica T-34]
Length = 1364
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/307 (39%), Positives = 170/307 (55%), Gaps = 15/307 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R RI +DEAHCVSQWGHDFRP Y L LR P+VPI+A+TATA VI D+
Sbjct: 770 LHRRKRIARFVVDEAHCVSQWGHDFRPHYTELGALRDDYPNVPIMALTATANERVIKDVK 829
Query: 186 TSLMLRDPNIINTGFDRPNL-YLAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTKV 242
L ++D ++ F+RPNL Y + ++ ++ L T+ ++Q IIYC ++
Sbjct: 830 EHLHMKDVIQLSQSFNRPNLEYQVRPKPGNKVLEEISSLILTSHKDQ---CGIIYCFSRE 886
Query: 243 ICEKVC-DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE V D+ ++ GI YHA +S R + + ++ +V+VAT AFGMGIDKPDVR
Sbjct: 887 SCETVAHDLSTKYGISAHHYHAKLSADDRAMVQQKWQQNKFRVIVATIAFGMGIDKPDVR 946
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHS 360
VIH+ APK L YYQE GRAGRDG SSVC +Y AD K +MI + E +E +
Sbjct: 947 FVIHHSAPKSLEGYYQETGRAGRDGKSSVCILYYNYADINKMKSMIEKEEDKSPEAKERA 1006
Query: 361 KTMMKRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDN-CRHNEMLELEQVP 418
+ + ++ + CRR +L +F G + + A CDN CR + + E V
Sbjct: 1007 IQSLDDIARFCNNKIECRRVQVLRYF-GETFSAAMCH----NTCDNCCRKGDTIRTEDVT 1061
Query: 419 RGGRMVV 425
+ V
Sbjct: 1062 EMAKKAV 1068
>gi|399033938|ref|ZP_10732419.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398067770|gb|EJL59249.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 703
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 156/276 (56%), Gaps = 19/276 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S WGHDFRP+Y L L+ P PILA+TATA DI L L+
Sbjct: 131 ISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPILALTATADKATRTDITKQLNLK 190
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDV 250
+P FDR NL L D + +++ +F EN+ S IIYC ++ E++ +
Sbjct: 191 NPKTFVASFDRKNLSLEVRPALDRV----KQIIDFVENKPNESGIIYCLSRKTTEELAEK 246
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L ++GI + YHA + K R + F+ D +VV AT AFGMGIDK +VR VIHY PK
Sbjct: 247 LQKSGITAKAYHAGLENKLRAKTQDEFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPK 306
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ YYQEIGRAGRDGL + F AD + LN S++Q + R+++Y
Sbjct: 307 NIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASEGLN-SDVQ---LAKLDRMKQY 362
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ +CRRK LL++F G VT + C NC
Sbjct: 363 ADALSCRRKILLSYF-GELVT---------ENCGNC 388
>gi|226326677|ref|ZP_03802195.1| hypothetical protein PROPEN_00530 [Proteus penneri ATCC 35198]
gi|225204898|gb|EEG87252.1| ATP-dependent DNA helicase RecQ [Proteus penneri ATCC 35198]
Length = 600
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 153/256 (59%), Gaps = 10/256 (3%)
Query: 133 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
VL+A+DEAHC+SQWGHDFRP YR + LR + DVPI+A+TATA DI L+LRD
Sbjct: 132 VLLAVDEAHCISQWGHDFRPEYRGIGLLRQYIADVPIIALTATADNTTRYDIINQLVLRD 191
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVL 251
P I + FDRPN+ K L +L F Q S IIYC ++ E+ + L
Sbjct: 192 PLIHISSFDRPNIRYTLVEK----YKPLDQLWLFIRGQKGKSGIIYCNSRSKVEETAERL 247
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
S+ G+ YHA + + QR ++ F +D +++VVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 248 SKRGLSIAGYHAGMEIAQRAKVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 307
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + FY AD + + + +P + I+ H M
Sbjct: 308 IESYYQETGRAGRDGLPAEAVLFYDPADMAWLRRCLDEKPESDQKAIEMHKLNAMG---A 364
Query: 370 YLELRTCRRKYLLNHF 385
+ E +TCRR LLN+F
Sbjct: 365 FAEAQTCRRLVLLNYF 380
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 187/396 (47%), Gaps = 75/396 (18%)
Query: 28 ELRTCRRKYLLNHFKGSSVTMAESQVPPDKCCDNCRQVVYMTPEYVTNNTSFLSRIPRIV 87
E RK +L+H +G S P D Q++Y+TPE V N +F+
Sbjct: 907 ETTVAHRKTILDHLRGDS--------PHDFV-----QLLYVTPEMVNQNQTFVR------ 947
Query: 88 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWG 147
A + H RCL + I IDEAHCVSQWG
Sbjct: 948 --AFEGLHS------------RCL--------------------LARIVIDEAHCVSQWG 973
Query: 148 HDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYL 207
HDFRP Y+ L E R VP++A+TATAT V D+ L + + + F+RPNL
Sbjct: 974 HDFRPDYKALGEFRSRFNAVPVMALTATATENVKFDVMQVLGMENCEVFTQSFNRPNLTY 1033
Query: 208 AASVKQD-----DIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN-GIQNRPY 261
K D +ADL K T ++ Q + I+YC ++ CE V L + I+ + Y
Sbjct: 1034 EVRPKGKGRAVLDSIADLIKST-YDGQ---AGIVYCLSRKNCESVATQLRKEYHIEAQHY 1089
Query: 262 HAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGR 321
HA I +R EI + + V+VAT AFGMGIDKPDVR VIH+ PK L YYQE GR
Sbjct: 1090 HAGIPSGKRIEIQQKWQEGEFNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGR 1149
Query: 322 AGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRT-CRRKY 380
AGRDG S CY +Y D + + + +EH K +++ V ++ E R+ CRR
Sbjct: 1150 AGRDGNQSGCYLYYGYGDTASLKHMIENGDGSPQQKEHQKQLLRNVVQFCENRSDCRRLQ 1209
Query: 381 LLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLE 413
+L++F + P C CDNC E
Sbjct: 1210 VLDYFN--------ERFDPRDCRNGCDNCASTSTFE 1237
>gi|229018126|ref|ZP_04175001.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1273]
gi|229024308|ref|ZP_04180766.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1272]
gi|228737002|gb|EEL87539.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1272]
gi|228743217|gb|EEL93342.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1273]
Length = 705
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC++L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICSTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPGEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|254361946|ref|ZP_04978077.1| ATP-dependent helicase RecQ [Mannheimia haemolytica PHL213]
gi|452745568|ref|ZP_21945402.1| ATP-dependent DNA helicase RecQ [Mannheimia haemolytica serotype 6
str. H23]
gi|153093493|gb|EDN74473.1| ATP-dependent helicase RecQ [Mannheimia haemolytica PHL213]
gi|452086443|gb|EME02832.1| ATP-dependent DNA helicase RecQ [Mannheimia haemolytica serotype 6
str. H23]
Length = 599
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 158/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I IA+DEAHCVSQWGHDFRP Y L LR P+VP++A+TATA DI L L
Sbjct: 131 KISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPNVPLMALTATADLTTRSDILHHLRL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
P+I FDRPN+ K L +L F ++ +G S I+YC ++ E++ +
Sbjct: 191 NSPHIYLGSFDRPNIRYTVQEK----FKPLEQLIKFISKQQGKSGIVYCNSRKKVEEITE 246
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
LS I YHA +S +QR+ + F +D I++VVAT AFGMGI+K +VR V+H+ P
Sbjct: 247 KLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIAFGMGINKSNVRFVVHFDLP 306
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L S FY +D+ + ++ +P I++H ++ +
Sbjct: 307 RSIESYYQETGRAGRDDLPSEAVLFYDPSDYAWLQKILLEEPESEQRNIKQHK---LQAI 363
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F E + K CD C
Sbjct: 364 GDFAESQTCRRLVLLNYF-------GEHRQEQCKNCDIC 395
>gi|269103722|ref|ZP_06156419.1| ATP-dependent DNA helicase RecQ [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163620|gb|EEZ42116.1| ATP-dependent DNA helicase RecQ [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 613
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 163/286 (56%), Gaps = 20/286 (6%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F++R+ ++ L+A+DEAHC+SQWGHDFRP Y L +L+ +P++A+TATA
Sbjct: 133 FIARLQQVKLALLAVDEAHCISQWGHDFRPEYAELGQLKQMFAPLPVMALTATADETTRQ 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI + L L P+I FDRPN+ K + L L + Q IIYC ++
Sbjct: 193 DIISRLALEQPHIHLGSFDRPNIRYTLLEKYKPLSQLLSYLASVRGQ---CGIIYCNSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++C+ L NG++ YHA +S+ R + F +D I +VVAT AFGMGI+KP+VR
Sbjct: 250 RVEQICEKLCENGLRAAAYHAGMSVNDRAYVQEAFQRDDIHIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHS 360
VIH+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ E++EH
Sbjct: 310 VIHHDIPRNIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLDEKPDGATREVEEHK 369
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M+ + E +TCRR+ LL++F S +K C NC
Sbjct: 370 LNAMR---DFAEAQTCRRQVLLHYFGQHS----------EKPCGNC 402
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 160/285 (56%), Gaps = 13/285 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ + IDEAHCVS WGHDFRP Y+ L E R PDVPI+A+TATAT V +D+ L +
Sbjct: 575 KLARLVIDEAHCVSHWGHDFRPDYKRLGEFRKKYPDVPIMALTATATTRVREDVLHQLQI 634
Query: 191 RDPNIINTGFDRPNL-YLAASVKQDDIMADLRKLTN--FENQFEGSTIIYCPTKVICEKV 247
+ + F+RPNL Y K MA++ L ++NQ S I+YC ++ C+
Sbjct: 635 SGTKLFLSSFNRPNLLYKVVPKKGKSAMAEIANLIKEKYKNQ---SGIVYCLSRKECDNT 691
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ GI+ YHA +S +R ++ ++ + + +V AT AFGMGIDKPDVR V HY
Sbjct: 692 ATYMCNEGIKAISYHAGLSDPKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYS 751
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK-- 365
PK + YYQE GRAGRDG +S C+ +Y D + + + L+DS E K M+
Sbjct: 752 LPKSIEGYYQESGRAGRDGKTSHCFLYYSYQDMHRIRKLIE--LDDSGNHESKKVHMQNL 809
Query: 366 -RVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
R+ Y E + CRR LN+F G + + + CDNC++
Sbjct: 810 FRIVSYCENKADCRRTLQLNYF-GETFDDNKCISNKETACDNCQN 853
>gi|154492528|ref|ZP_02032154.1| hypothetical protein PARMER_02162 [Parabacteroides merdae ATCC
43184]
gi|154087753|gb|EDN86798.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 621
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 155/283 (54%), Gaps = 22/283 (7%)
Query: 129 IPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICT 186
+PRI LIAIDEAHC+S WGHDFRP Y LS L+ P VPI+A+TATA + DI
Sbjct: 137 LPRIDISLIAIDEAHCISHWGHDFRPEYTQLSVLKENFPKVPIIALTATADKITRTDILN 196
Query: 187 SLMLRDPNIINTGFDRPNLYLA---ASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
L LRDP + FDRPNL L K++ I A + + Q S IIYC ++
Sbjct: 197 QLKLRDPKTFISSFDRPNLSLTIRRGLSKKEKIAAIVHFINRHHRQ---SGIIYCMSRNS 253
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + + LS I+ YHA +S +R++ F+ D + VV AT AFGMGIDK +VR V
Sbjct: 254 TESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWV 313
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY P + YYQEIGRAGRDG+ S FY D ++ + +S ++
Sbjct: 314 IHYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDI----LLLRRFAEESGQKDVCLQK 369
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ R+ +Y E CRR+ LL++F + DK C NC
Sbjct: 370 LNRMRRYCEADICRRRILLSYFGEET----------DKDCGNC 402
>gi|332291549|ref|YP_004430158.1| ATP-dependent DNA helicase RecQ [Krokinobacter sp. 4H-3-7-5]
gi|332169635|gb|AEE18890.1| ATP-dependent DNA helicase RecQ [Krokinobacter sp. 4H-3-7-5]
Length = 696
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 147/256 (57%), Gaps = 11/256 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S WGHDFRP+Y L L+ P P++A+TATA DDI L +
Sbjct: 132 ISLIAIDEAHCISSWGHDFRPAYTQLGYLKRRFPQAPLIALTATADRSTQDDIADQLGIS 191
Query: 192 DPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ + FDRPNLYL K++D + D E S IIYC ++ E +
Sbjct: 192 NAKKYVSSFDRPNLYLDVRPGQKRNDQILDF-----LEEHPGESGIIYCLSRKSTESLAA 246
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NG + YHA + +QR ++ F+ D ++ AT AFGMGIDK +VR VIHY P
Sbjct: 247 KLQANGYKAAAYHAGMHAEQRSKVQEDFINDTTPIICATIAFGMGIDKSNVRWVIHYNMP 306
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K+L YYQEIGRAGRDGL + FY AD + + ++ ++ ++ + R+++
Sbjct: 307 KNLEGYYQEIGRAGRDGLPAHTLLFYSYAD----TLQLRQFIDGAKNADYQMAKLDRMQQ 362
Query: 370 YLELRTCRRKYLLNHF 385
Y E +CRRK L+N+F
Sbjct: 363 YAEALSCRRKVLINYF 378
>gi|429855219|gb|ELA30187.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1695
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 167/289 (57%), Gaps = 12/289 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ I IDEAHCVSQWGHDFRP Y+ L +LR P VPI+A+TATAT VI DI +L +
Sbjct: 929 RLARIVIDEAHCVSQWGHDFRPDYKALGKLRNHFPTVPIIALTATATQNVIVDIKHNLGM 988
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCD 249
+ + F+RPNL K+ +++ + L +++++ IIY ++ E+V +
Sbjct: 989 DNCEVFCQSFNRPNLTYEVRRKERELVHKIADL--IQSKYDQQCGIIYTLSRKTSEQVAE 1046
Query: 250 VL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + GI YHA +S + R ++ + KD I VVVAT AFGMGIDKPDVR VIH+
Sbjct: 1047 KLRDKYGILAHHYHAQMSPEDRIDVQRQWQKDRIHVVVATIAFGMGIDKPDVRFVIHHSV 1106
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK L YYQE GRAGRDG S C ++ D T MI + N+ + +E +TM+ RV
Sbjct: 1107 PKSLEGYYQETGRAGRDGNPSDCILYFGYQDVVTLRKMIADGDGNEDQ-KERQRTMLNRV 1165
Query: 368 EKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+ + R CRR +L +F G E +K CDNCR + E +
Sbjct: 1166 TAFCDNRENCRRVEILRYF-GEVFNGDEC----NKTCDNCRAGAVFEQQ 1209
>gi|423611203|ref|ZP_17587064.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD107]
gi|401248656|gb|EJR54978.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD107]
Length = 705
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC++L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICSTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 164/287 (57%), Gaps = 10/287 (3%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP YR LS LR P VP++A+TATATP V +DI L +++
Sbjct: 344 IDEAHCVSQWGHDFRPDYRNLSILRTNFPKVPMMAMTATATPRVREDILHQLKMKNTKWF 403
Query: 197 NTGFDRPNLYLAASVKQDDIMADLRKLTN-FENQF-EGSTIIYCPTKVICEKVCDVLSRN 254
F+R NL V+ + + +++ ++F S I+YC ++ C+ V + LSR
Sbjct: 404 IQSFNRTNLKF--EVRPKKLKSCTKEIIEVIHSEFPRRSGIVYCLSRRECDLVAEELSRA 461
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVK-DLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
G+ YHA ++ QR+ I +++ D K+V AT AFGMGIDKPDVR VIH+ PK +
Sbjct: 462 GLAASAYHAGMTDAQRRRIQEAWIQEDKCKIVCATIAFGMGIDKPDVRFVIHHSLPKSIE 521
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ---PNLND-SEIQEHSKTMMKRVEK 369
YYQE GR+GRDGL + C +Y D + + Q P N + +Q H + + + V
Sbjct: 522 GYYQEAGRSGRDGLPATCILYYHWHDVVRLRKLIQGDTPGSNAFANVQLHEEALFRMVSY 581
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQ 416
CRR+ +L+HF G + A+ + CDNC+ + LEQ
Sbjct: 582 CENQIDCRRRQILSHF-GEAFDAADCGLVVGCMCDNCQQADRRRLEQ 627
>gi|406603614|emb|CCH44869.1| bloom syndrome protein [Wickerhamomyces ciferrii]
Length = 1521
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 162/289 (56%), Gaps = 18/289 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R ++ + +DEAHCVS WGHDFRP Y+ LS + P++P++A+TATA V DI
Sbjct: 822 LYRQGKLARVVVDEAHCVSSWGHDFRPDYKHLSYFKTNYPEIPVMALTATANDHVKMDII 881
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMA--DLRKLTNFENQFEGSTIIYCPTKVI 243
+L L+DP + F+R NL+ K D M ++ L F++Q + IIYC +K
Sbjct: 882 HNLNLKDPVFLKQSFNRTNLFYEVLNKDKDHMKHIEMSILGKFKDQ---TGIIYCHSKNA 938
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
CE+ D L +GI+ YHA ++ + R +I + IKV+ AT AFGMGIDK DVR V
Sbjct: 939 CEQTSDKLINSGIKCAFYHAGMTPEDRLDIQKAWQNGTIKVICATIAFGMGIDKADVRFV 998
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKT 362
IH P+ L YYQE GRAGRDG S C FY D T NMI + D +E T
Sbjct: 999 IHLTLPRTLEGYYQETGRAGRDGNYSYCTMFYGFRDARTLQNMISRDKDLDKAGKEKHLT 1058
Query: 363 MMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCR 407
+++V +Y E T CRR+ +L +F Q D+C CDNC+
Sbjct: 1059 KLRQVIQYCENSTDCRRQQVLQYFN--------EQFHKDQCAKNCDNCK 1099
>gi|390953896|ref|YP_006417654.1| ATP-dependent DNA helicase RecQ [Aequorivita sublithincola DSM
14238]
gi|390419882|gb|AFL80639.1| ATP-dependent DNA helicase RecQ [Aequorivita sublithincola DSM
14238]
Length = 692
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 158/284 (55%), Gaps = 21/284 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
F+ +I L AIDEAHC+S WGHDFRP+Y L L+ P VP++A+TATA +DI
Sbjct: 127 FILNSIKINLFAIDEAHCISSWGHDFRPAYTQLKSLKEQFPTVPLIALTATADRATREDI 186
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKV 242
L + + FDRPNLYL Q+ + D K+ E IIYC ++
Sbjct: 187 AAQLSIPNAKTFIASFDRPNLYLDVRPGQNRNKQILDFLKIHRDE-----CGIIYCLSRK 241
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
EK+ LS G + YHA ++ ++R +I F+ D+ ++VAT AFGMGIDK +VR
Sbjct: 242 STEKLAATLSSKGYKAEAYHAGLTSEERTQIQENFINDVSPIIVATIAFGMGIDKSNVRW 301
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK++ YYQEIGR+GRDGL + FY AD ++ + +E + +
Sbjct: 302 VIHYNMPKNIDGYYQEIGRSGRDGLPAHTILFYSFADV----IMLRKFAEGTETEAYQLA 357
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++R++++ E +CRRK LL +F G +T + C NC
Sbjct: 358 KLERMQQFAEALSCRRKALLGYF-GEHIT---------EDCGNC 391
>gi|298206967|ref|YP_003715146.1| ATP-dependent DNA helicase recQ [Croceibacter atlanticus HTCC2559]
gi|83849601|gb|EAP87469.1| ATP-dependent DNA helicase recQ [Croceibacter atlanticus HTCC2559]
Length = 698
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 142/252 (56%), Gaps = 7/252 (2%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIA+DEAHC+S WGHDFRP+Y L L+ P +PI+A+TATA DDI L +
Sbjct: 135 LIAVDEAHCISAWGHDFRPAYTKLGSLKQEFPQIPIIALTATADKATQDDISKQLNISHA 194
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSR 253
FDR NL+L Q I L+ L Q S IIYC ++ EK+ L +
Sbjct: 195 KKHLASFDRQNLFLDVRPGQSRIKQILKFLGPRGAQ---SGIIYCLSRKSTEKLAQKLKQ 251
Query: 254 NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
G + + YHA +S + R I FV D ++VAT AFGMGIDK +VR VIHY PK++
Sbjct: 252 AGYKAKAYHAGLSPEDRANIQEDFVNDTTPIIVATIAFGMGIDKSNVRWVIHYNMPKNIE 311
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQEIGRAGRDGL + FY AD + + + +E ++R++ Y E
Sbjct: 312 GYYQEIGRAGRDGLKAHTLLFYSYADVIQ----LRRFTEGTATEEFQLAKLERMQHYAEA 367
Query: 374 RTCRRKYLLNHF 385
+CRRK LLN+F
Sbjct: 368 LSCRRKALLNYF 379
>gi|440680362|ref|YP_007155157.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
gi|428677481|gb|AFZ56247.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
Length = 724
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 163/300 (54%), Gaps = 15/300 (5%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R +S+ LPL DV + I AIDEAHCVS+WGHDFRP YR L LR PDVP
Sbjct: 119 RLVSDRFLPLLDV----VKEKIGISTFAIDEAHCVSEWGHDFRPEYRQLKLLRKRYPDVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+A+TATAT V DI L L+ P+I F+R NLY K A++ ++ EN
Sbjct: 175 TIALTATATDRVRADIIEQLGLKQPSIHIASFNRQNLYYEVRAKSKRAYAEILEIVR-EN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ +++ L ++ + PYHA +S +R + F++D ++V+VAT
Sbjct: 234 --EGSGIIYCLTRKKVDELTFKLQKDKVAALPYHAGLSDDERSKNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR VIH P+++ YYQE GRAGRD S C F+ AD
Sbjct: 292 IAFGMGINKPDVRFVIHSDLPRNIEGYYQESGRAGRDDEPSRCTLFFSFADVKTIEWSIN 351
Query: 349 PNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
D + Q +K +++V Y E CRR L +F E CDNCR+
Sbjct: 352 QK-TDPQEQLIAKQQLRQVIDYAEGTDCRRTIQLGYF-------GERFAGNCGNCDNCRY 403
>gi|50292717|ref|XP_448791.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528104|emb|CAG61761.1| unnamed protein product [Candida glabrata]
Length = 1371
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 18/293 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ LS ++ PD+P++A+TATA+ V DI +L L
Sbjct: 750 QLARIVVDEAHCVSNWGHDFRPDYKQLSYFKVQYPDIPMMALTATASEQVQMDIVFNLKL 809
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+D + F+R NLY K + + ++ + QF T IIYC +K CE+
Sbjct: 810 KDNLFLRQSFNRTNLYYEVRKKTKNTIFEI--CDTIKQQFRNQTGIIYCHSKNSCEQTAQ 867
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+ RNGI+ YHA + +R ++ + D ++V+ AT AFGMGIDK DVR V H+ P
Sbjct: 868 QMQRNGIKCAYYHAGMEADERLQVQREWQNDNLQVICATVAFGMGIDKADVRFVFHFTVP 927
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEHSKTMMKRV 367
+ L YYQE GRAGRDG S C T+Y D + Q NL+ Q+H +++V
Sbjct: 928 RTLEGYYQETGRAGRDGNYSYCITYYSFRDVRTMQTMIQKDKNLDGINKQKHLDK-LQQV 986
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPP---DKCCDNCRHNEMLELEQ 416
Y E T CRRK +L++F + P +K CDNCR++ + E+
Sbjct: 987 TAYCENDTDCRRKLVLSYFS--------EEFDPINCNKNCDNCRNSSSVTKEE 1031
>gi|423559544|ref|ZP_17535846.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MC67]
gi|401188048|gb|EJQ95117.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MC67]
Length = 705
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 162/280 (57%), Gaps = 7/280 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVS WGHDFRP Y+ L LR VP++A+TATA +V D+ T+L +
Sbjct: 605 LARIVIDEAHCVSHWGHDFRPDYKQLGILRDKYRGVPVMALTATANEIVKKDVITTLRME 664
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ + + F+RPNLY K+D + A++ + + + + S IIYC ++ CE+V L
Sbjct: 665 NCIEMKSSFNRPNLYYEIKPKKD-VFAEMHRFIS-NGRLDQSGIIYCLSRTSCEQVAAKL 722
Query: 252 SRN--GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
RN G++ YHA + +R+ I + + KV+VAT AFGMG+DK DVR VIH+ P
Sbjct: 723 -RNEYGLKAWHYHAGLDKAERQRIQSSWQAGIYKVIVATIAFGMGVDKGDVRYVIHHSFP 781
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L YYQE GRAGRDG + C FY D + D+E +E + M+++V +
Sbjct: 782 KSLEGYYQETGRAGRDGKPAHCIMFYSYKDSITFQKLITSGEGDAETKERQRQMLRQVIQ 841
Query: 370 YLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ E ++ CRRK +L++F G S A D CC+ +
Sbjct: 842 FCENKSDCRRKQILSYF-GESFDKALCNRGCDICCEGATY 880
>gi|118579582|ref|YP_900832.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
gi|118502292|gb|ABK98774.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
Length = 714
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 159/294 (54%), Gaps = 20/294 (6%)
Query: 115 RLPLPDVPILFLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV 172
RL LPD FL R+ ++ L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+
Sbjct: 117 RLLLPD----FLERLGGLKLALFAIDEAHCISQWGHDFRPDYVKLGRLRELFPSVPIVAM 172
Query: 173 TATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG 232
TATA P DI L + + GFDRPN+ A KQ + + L+ + + +
Sbjct: 173 TATADPETRRDIIRQLGIERATLFVAGFDRPNITYAVIPKQKPVN---QLLSFLKGRGDE 229
Query: 233 STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFG 292
S I+Y ++ E+V + L + G YHA + ++R + F +D ++VVVAT AFG
Sbjct: 230 SGIVYALSRKRVEQVTERLQQAGFDAAAYHAGLPDRERSRVQDAFRRDDLRVVVATVAFG 289
Query: 293 MGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN 352
MGIDKP+VR V+HY PK + +YYQE GRAGRDGL S + D + + + N
Sbjct: 290 MGIDKPNVRFVVHYDLPKSVESYYQETGRAGRDGLPSQALMLFGMGDVMTARSLIENSDN 349
Query: 353 DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ + + V Y E TCRR+ LL +F E + D C NC
Sbjct: 350 AERVRIELQKLNAMV-SYAEALTCRRRALLAYF-------GEQR---DDDCGNC 392
>gi|114797654|ref|YP_759271.1| ATP-dependent DNA helicase RecQ [Hyphomonas neptunium ATCC 15444]
gi|114737828|gb|ABI75953.1| ATP-dependent DNA helicase RecQ [Hyphomonas neptunium ATCC 15444]
Length = 615
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 161/302 (53%), Gaps = 11/302 (3%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R+ ++ LIA+DEAHCVSQWGHDFRP YR L L+ P VP LAVTATA DDI
Sbjct: 131 LARM-KVSLIAVDEAHCVSQWGHDFRPDYRALGRLKGLFPGVPRLAVTATADARTRDDIL 189
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFE--NQFEGSTIIYCPTKVI 243
T L L +P + FDRPNL L+A K+ + A + +L N S I+Y T+
Sbjct: 190 TQLNLTNPAVHVASFDRPNLILSAEPKESNRTARVVQLVKARTGNGAGASGIVYAATRNA 249
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + D L + G+ + YHA + + R E F+ + V+ AT AFGMG+DKPDVR V
Sbjct: 250 VEDLADALDKAGVPSLAYHAGLDARVRAERQRRFLLEEGLVMCATVAFGMGVDKPDVRFV 309
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IH PK L AY+QE+GR GRDG + + AD ++ + E++ T
Sbjct: 310 IHADPPKTLEAYWQEVGRGGRDGEPAEGVALFGPADMNRSLQWTYSSDAPDEVKRVQLTK 369
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRM 423
+++ +L CRR + +F E +V P CD CR E+ E R +M
Sbjct: 370 TRQLFAFLNGDECRRGAVRRYF-------GEEKVDPCGVCDVCR-GEVGERHDATRYAQM 421
Query: 424 VV 425
V
Sbjct: 422 AV 423
>gi|281420257|ref|ZP_06251256.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281405752|gb|EFB36432.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 620
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/274 (42%), Positives = 162/274 (59%), Gaps = 11/274 (4%)
Query: 118 LPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATAT 177
+ ++P LF S I +I L A+DEAHC+SQWGHDFRP Y L L +VP++A+TATA
Sbjct: 117 ISEIPYLF-SNI-KISLFAVDEAHCISQWGHDFRPEYSQLGMLHENFRNVPVMALTATAD 174
Query: 178 PVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIM-ADLRKLTNF-ENQFEGSTI 235
+ +DI L L +++ FDRPNL L +V+Q+ A L+ +T F N E + I
Sbjct: 175 KITREDIIRQLHLNGQTFVSS-FDRPNLSL--TVRQESTKKAKLQYITRFISNHPEEAGI 231
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGI 295
IYC ++ E V L GI YHA ++ + R + F D I+VV AT AFGMGI
Sbjct: 232 IYCLSRKNTEMVAQELIDLGINAAAYHAGMTAQTRASVQERFKMDQIQVVCATIAFGMGI 291
Query: 296 DKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE 355
DK +VR VIHY PK + ++YQEIGRAGRDG S FY AD + + +S
Sbjct: 292 DKSNVRWVIHYNMPKSIESFYQEIGRAGRDGAPSDTVLFYSMADI----ITLRSFCEESG 347
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSS 389
++ + ++R+E+Y E R CRR+ LLN+F +S
Sbjct: 348 QRDVNMEKLRRMEEYAESRVCRRRILLNYFGETS 381
>gi|423469086|ref|ZP_17445830.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG6O-2]
gi|402440437|gb|EJV72430.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG6O-2]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|206973530|ref|ZP_03234448.1| ATP-dependent DNA helicase RecQ [Bacillus cereus H3081.97]
gi|206747686|gb|EDZ59075.1| ATP-dependent DNA helicase RecQ [Bacillus cereus H3081.97]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YENLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|67475629|ref|XP_653505.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|56470462|gb|EAL48119.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|449702365|gb|EMD43019.1| ATP-dependent DNA helicase recQ, putative [Entamoeba histolytica
KU27]
Length = 509
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 159/286 (55%), Gaps = 23/286 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L I ++ + A+DEAHC+SQWGHDFRPSY LS L+ PD+PI+A+TATAT V +DI
Sbjct: 151 LYSIKKLGMFAVDEAHCISQWGHDFRPSYLELSYLKKTYPDIPIIALTATATSKVKEDII 210
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVIC 244
SL L++P I + FDRPN+Y + +D ++ LT +Q E IIYC T++ C
Sbjct: 211 KSLELKNPQIFTSSFDRPNIYFKV-IYKDLYETPIQILTQILHQHEKEGGIIYCSTRMEC 269
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + +S NG YHA + ++R+ I + + VVVAT AFGMGID+ DVR VI
Sbjct: 270 ELIEKYISTNGYPVAKYHAGMKSEERETIQKKWESGEVNVVVATIAFGMGIDRGDVRFVI 329
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+ PK + + QE GRAGRDG + + DF + + N SEI
Sbjct: 330 HWNIPKTIEGFMQEAGRAGRDGKPAESIILFSNDDFEREVAL---NQETSEI-------- 378
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDK-CCDNCRHN 409
+ + +CRRK LL +F E+ P+K CCD C N
Sbjct: 379 --IRELCVECSCRRKCLLKYF-------GETTFKPNKRCCDLCNEN 415
>gi|423453794|ref|ZP_17430647.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG5X1-1]
gi|401137476|gb|EJQ45057.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG5X1-1]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|344231853|gb|EGV63732.1| ATP-dependent DNA helicase [Candida tenuis ATCC 10573]
Length = 1031
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 166/284 (58%), Gaps = 22/284 (7%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
+ +DEAHC+S WGHDFRP Y+ +S R PD+PI+A+TATA V DI L ++ P
Sbjct: 483 VIVDEAHCISSWGHDFRPDYKAMSIFRQNYPDIPIMALTATANDKVRLDILHLLNMKSPK 542
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTKVICEKVCDVLS 252
+ F+R NLY +K+ + D+R L ++NQ + IIYC +K CE++ L+
Sbjct: 543 VFKQSFNRINLYYEIRMKKAGFVEDIRDTILAKYKNQ---TGIIYCHSKQSCEQISMKLN 599
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
+ GI++ YHA +S + R E+ + ++ ++V+ AT AFGMGIDKP+VR VIH P++L
Sbjct: 600 QFGIESAFYHAGMSTEDRFEVQDSWQQERLRVICATIAFGMGIDKPNVRFVIHSFLPRNL 659
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK----TMMKRVE 368
YYQE GRAGRDGL S C +Y D ++ Q D E + +K + +++V
Sbjct: 660 EGYYQETGRAGRDGLHSDCIMYYSYKDARNLQLMIQK---DEEYNQATKDNHLSKLRQVI 716
Query: 369 KYLELR-TCRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCRHN 409
+Y E CRR+ +L +F E+ P D K CD+C +N
Sbjct: 717 QYCENNHDCRRRQVLQYFN-------ENFDPKDCQKQCDSCNNN 753
>gi|402556977|ref|YP_006598248.1| ATP-dependent DNA helicase RecQ [Bacillus cereus FRI-35]
gi|401798187|gb|AFQ12046.1| ATP-dependent DNA helicase RecQ [Bacillus cereus FRI-35]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|423605483|ref|ZP_17581376.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD102]
gi|401242838|gb|EJR49209.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD102]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|344202287|ref|YP_004787430.1| ATP-dependent DNA helicase RecQ [Muricauda ruestringensis DSM
13258]
gi|343954209|gb|AEM70008.1| ATP-dependent DNA helicase RecQ [Muricauda ruestringensis DSM
13258]
Length = 695
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 159/278 (57%), Gaps = 18/278 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L A+DEAHC+S WGHDFRP+Y L +L+ P+VPI A TATA DDI L +
Sbjct: 133 VSLFAVDEAHCISAWGHDFRPAYTQLGKLKEVFPNVPIAAFTATADSATQDDILKQLNIT 192
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ FDR NL+L + +R L E + + S IIYC ++ EK+ + L
Sbjct: 193 NAERHIASFDRKNLFLEVRPGTNRFTQIVRFL---EQRTDQSGIIYCLSRKGTEKLAEKL 249
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ NG + + YHA + + R ++ FV D ++VAT AFGMGIDK +VR VIHY PK+
Sbjct: 250 NNNGFKAQAYHAGMDTEARNQVQEDFVNDRTPIIVATIAFGMGIDKSNVRWVIHYNMPKN 309
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ +YYQEIGR+GRD L + FY +D + + + +SE +E ++R++++
Sbjct: 310 IESYYQEIGRSGRDRLPANTLLFYSFSDVIQ----LRKFIEESETKEVQLAKLERMQQFA 365
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
E +CRR LLN+F G V+ + C CDNC+
Sbjct: 366 EALSCRRIALLNYF-GEHVS--------ENCGNCDNCK 394
>gi|402492603|ref|ZP_10839363.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 728
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 148/258 (57%), Gaps = 11/258 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLML 190
I +A+DEAHC+S+WGHDFRP YR L + + D +PI+ +TATATP V +DI +L +
Sbjct: 136 ISFLAVDEAHCISEWGHDFRPEYRNLRRIIQSIGDNIPIIGLTATATPKVQEDILKNLGI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
N F+RPNL+ K ++ D+ + F Q G S IIYC ++ E++
Sbjct: 196 SGANTFKASFNRPNLFYEVRPKTANVETDIIR---FVKQNTGKSGIIYCLSRKRVEELAQ 252
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NGI PYHA + K R + +F+ + + VVVAT AFGMGIDKPDVR V+HY P
Sbjct: 253 ALQVNGINAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVVHYDIP 312
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKRV 367
K + +YYQE GRAGRDG C +Y D K M +P QE +++ V
Sbjct: 313 KSIESYYQETGRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAE----QEIGNALLQEV 368
Query: 368 EKYLELRTCRRKYLLNHF 385
+ E RRK++L++F
Sbjct: 369 VAFAETSISRRKFILHYF 386
>gi|288575145|ref|ZP_06393502.1| ATP-dependent DNA helicase RecQ [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570886|gb|EFC92443.1| ATP-dependent DNA helicase RecQ [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 603
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 157/284 (55%), Gaps = 14/284 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FLSRI + +IAIDEAHCVSQWGHDFRP Y L EL P+VP +AVTATA + +I
Sbjct: 126 FLSRIS-LSVIAIDEAHCVSQWGHDFRPEYLRLGELGRAFPEVPRIAVTATADELTRKEI 184
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCPTKV 242
+ L L + +GFDRPN+ +K+ ++L +F + S I+YC T+
Sbjct: 185 LSRLDLNGGKVFVSGFDRPNIRYQVVMKE----KPKKQLLDFLRRSHRNDSGIVYCMTRR 240
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NGI+ YH + ++R+ + F + VVVAT AFGMGIDKPDVR
Sbjct: 241 KTESIAQWLRDNGIKALSYHGGMGAEERRTVQERFQDEEAVVVVATIAFGMGIDKPDVRF 300
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V H PK L+AYYQE GRAGRDGL + + Y AD T + + + D + S+
Sbjct: 301 VAHLDMPKSLAAYYQETGRAGRDGLPADAWMTYGMADVTGQLKLIEMSEGDERYKRISRQ 360
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ + Y E CRR+ LL+ F G S V P CD C
Sbjct: 361 NLEIMLGYCETTGCRRRSLLSFF-GDSCDV------PCGNCDTC 397
>gi|393723077|ref|ZP_10343004.1| ATP-dependent DNA helicase RecQ [Sphingomonas sp. PAMC 26605]
Length = 588
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 150/286 (52%), Gaps = 22/286 (7%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
L+R P + L AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA V DI
Sbjct: 123 LLARAP-LGLFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPDVPRLALTATADAVTRADI 181
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L + +I GFDRPN+ S K + R++ + + G+ I+Y ++
Sbjct: 182 LEQLGIPHEGMIVAGFDRPNIQYRISPKDNAT----RQIADMIAETPGAGIVYLQSRAGT 237
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
EK+ + LS+ G R YHA + R + FV V+ AT AFGMGIDKPDVR V
Sbjct: 238 EKMAEALSKTGRPTRAYHAGLDPHVRAKNQADFVASEDMVMCATVAFGMGIDKPDVRFVA 297
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEHSKT 362
H G PK + +YYQE GRAGRDG +V + F+ DF + + + E Q +
Sbjct: 298 HAGLPKSIESYYQETGRAGRDGDPAVAHLFWGAEDFARARQ----RIGEVEPARQPGERQ 353
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + E CRRK LL HF S PD C CDNC
Sbjct: 354 RLAALGALAETAGCRRKILLKHFGDDS---------PDNCGNCDNC 390
>gi|385301828|gb|EIF45990.1| atp-dependent helicase [Dekkera bruxellensis AWRI1499]
Length = 358
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 157/283 (55%), Gaps = 8/283 (2%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R R+ + +DEAHCVS WGHDFRP Y+ LS + PD+P++A+TATA V DI
Sbjct: 62 LHRDGRLARVVVDEAHCVSSWGHDFRPDYKALSYFKEQYPDIPVMALTATANDHVCLDIV 121
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
+L L P + F+R NLY K+ + + + +L N + + IIYC +K CE
Sbjct: 122 HNLKLSSPKFLKQSFNRTNLYYGVVPKKKNTVQRIAELIN-KKYTNYTGIIYCHSKNSCE 180
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ L GI+ YHA +S + R + + D IKV+ AT AFGMGIDKPDVR VIH
Sbjct: 181 HTSEKLCAFGIKCDFYHAGMSTEDRSRVQMAWQHDQIKVICATIAFGMGIDKPDVRFVIH 240
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTMM 364
P++L YYQE GRAGRDG S C +Y D T N+I + D + +E +
Sbjct: 241 LTMPRNLEGYYQETGRAGRDGKHSDCLMYYSMRDAMTLQNLIQRDRELDRDSKEQHLAKL 300
Query: 365 KRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++V +Y E T CRR+ +L +F S + K CDNC
Sbjct: 301 RQVIQYCENTTDCRRQQVLQYFNESF-----DRKNCHKQCDNC 338
>gi|429767396|ref|ZP_19299595.1| ATP-dependent DNA helicase RecQ [Clostridium celatum DSM 1785]
gi|429181004|gb|EKY22199.1| ATP-dependent DNA helicase RecQ [Clostridium celatum DSM 1785]
Length = 583
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 156/278 (56%), Gaps = 15/278 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I +IAIDEAHCVSQWGHDFR SY+ +S L + PI+ A TATAT V +DI L L
Sbjct: 131 ISMIAIDEAHCVSQWGHDFRSSYKKISRAISLLRNRPIVTAFTATATKEVREDIINLLEL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
P + +GFDRPNL + V + ++ L + IIYC TK E + +
Sbjct: 191 NSPKVFISGFDRPNLKI---VIEKGVIKKRYILDYINENKDQCGIIYCSTKKEVEALHEF 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L GI+++ YHA +S ++RK+ F+ D + +++AT AFGMGIDKP+VR VIHY PK
Sbjct: 248 LESKGIESKKYHAGLSGEERKQAQEDFIYDRVNIIIATIAFGMGIDKPNVRYVIHYNMPK 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ YYQEIGRAGRDG S C + D T I + + +E+ ++ +
Sbjct: 308 NIEGYYQEIGRAGRDGEKSECIMLFSPGDVTTQKYIIDNSTENIMRKENELAKLQTMINL 367
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + C RKY+LN+F + D+C C NC
Sbjct: 368 IYTQDCYRKYILNYF---------GEEFNDRCNNCSNC 396
>gi|42781899|ref|NP_979146.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ATCC 10987]
gi|217960255|ref|YP_002338815.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH187]
gi|222096315|ref|YP_002530372.1| ATP-dependent DNA helicase recq [Bacillus cereus Q1]
gi|229139452|ref|ZP_04268023.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-ST26]
gi|375284769|ref|YP_005105208.1| ATP-dependent DNA helicase RecQ [Bacillus cereus NC7401]
gi|423352562|ref|ZP_17330189.1| ATP-dependent DNA helicase RecQ [Bacillus cereus IS075]
gi|423372701|ref|ZP_17350041.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AND1407]
gi|423568327|ref|ZP_17544574.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MSX-A12]
gi|42737823|gb|AAS41754.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ATCC 10987]
gi|217065979|gb|ACJ80229.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH187]
gi|221240373|gb|ACM13083.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Q1]
gi|228643999|gb|EEL00260.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-ST26]
gi|358353296|dbj|BAL18468.1| ATP-dependent DNA helicase RecQ [Bacillus cereus NC7401]
gi|401091661|gb|EJP99801.1| ATP-dependent DNA helicase RecQ [Bacillus cereus IS075]
gi|401099138|gb|EJQ07148.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AND1407]
gi|401210615|gb|EJR17366.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MSX-A12]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|410095931|ref|ZP_11290923.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409227962|gb|EKN20857.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 727
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 152/285 (53%), Gaps = 17/285 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + I A+DEAHC+S+WGHDFRP YR + + + P++A+TATATP V DI
Sbjct: 131 FLRNV-NISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPLIALTATATPKVQHDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D ++ + F+R NLY K +++ R++ + EG S I+YC ++
Sbjct: 190 QKNLGMIDASVFKSSFNRSNLYYEVRPKDENVD---REIIKYIKANEGKSGIVYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E+ D+L NGI+ YHA + QR F+ + V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEEFADILKANGIKALAYHAGMDSGQRSANQDAFLLEKADVIVATIAFGMGIDKPDVRYV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK L YYQE GRAGRDG C FY D K Q QE K +
Sbjct: 307 IHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAE--QEIGKQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y E CRRK LL++F + + C CDNC
Sbjct: 365 LLETAAYAETSVCRRKVLLHYFG--------EEYLEENCGNCDNC 401
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 161/291 (55%), Gaps = 17/291 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L + ++ IA+DEAHC+S WGHDFRP Y+ L R+ PD+PI+A+TATA +V DDI
Sbjct: 350 LHKSRKLARIAVDEAHCLSNWGHDFRPDYKNLDYFRINYPDIPIVALTATANNLVQDDII 409
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK---LTNFENQFEGSTIIYCPTKV 242
+L L P ++ F+R NL+ K I+ L +F++Q S I+YC +K
Sbjct: 410 RNLRLGRPLVLKQSFNRNNLFYEVLPKDKKIVTSQIASYILNDFKSQ---SGIVYCHSKD 466
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
CEKV L++ G++ YHA ++ KQR + L+ + +V+ AT AFGMGIDK DVR
Sbjct: 467 TCEKVSMALTQMGVKASFYHAGMTNKQRDHVQKLWQSNRYQVICATVAFGMGIDKADVRF 526
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN--LNDSEIQEHS 360
VIHY P+ L YYQE GRAGRDG S C TFY D + Q + LN H
Sbjct: 527 VIHYTVPRSLEGYYQETGRAGRDGNFSYCITFYSFNDVRSLQKLIQTDKGLNKENKLTHL 586
Query: 361 KTMMKRVEKYLE-LRTCRRKYLLNHFKGS-SVTVAESQVPPDKCCDNCRHN 409
++ V Y E CRRK +L++F V + K CDNC N
Sbjct: 587 DK-LQHVMAYCENTINCRRKQILSYFNEEFDVNLCH------KNCDNCLRN 630
>gi|228985910|ref|ZP_04146058.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773839|gb|EEM22257.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 165/303 (54%), Gaps = 20/303 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R R+ I IDEAHCVSQWGHDFRP Y+ L LR LP VP++A+TATAT V D+
Sbjct: 824 LNRKSRLARIVIDEAHCVSQWGHDFRPDYKELGNLRSQLPGVPMMALTATATENVKVDVL 883
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVK--QDDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L ++ + + F+RPNL K +++++A + + T + NQ S IIYC ++
Sbjct: 884 HNLQMQGCELFSQSFNRPNLTYEVRPKPSKNELLASIANIITTKYPNQ---SGIIYCLSR 940
Query: 242 VICEKVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
CEKV L + GI+ YHA + +R ++ + V+VAT AFGMGIDKPDV
Sbjct: 941 DSCEKVAKSLREDYGIKAEHYHAGMKPDERNQVQHGWQAGRSHVIVATIAFGMGIDKPDV 1000
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIH+ PK L YYQE GRAGRDG S CY +Y D + + +
Sbjct: 1001 RYVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYKDAMTITRMIDRGEGSKQQKSRQ 1060
Query: 361 KTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLELEQ 416
+ M+ V +Y E ++ CRR +L +F + C CDNC+ + + EL
Sbjct: 1061 RQMLHNVVQYCENKSDCRRVQILAYFN--------EYFRREDCNSSCDNCKSDSVFELHD 1112
Query: 417 VPR 419
R
Sbjct: 1113 FSR 1115
>gi|47567630|ref|ZP_00238340.1| ATP-dependent DNA helicase RecQ [Bacillus cereus G9241]
gi|47555607|gb|EAL13948.1| ATP-dependent DNA helicase RecQ [Bacillus cereus G9241]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|229091823|ref|ZP_04223018.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock3-42]
gi|228691513|gb|EEL45269.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock3-42]
Length = 705
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|163787884|ref|ZP_02182330.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
gi|159876204|gb|EDP70262.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
Length = 733
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 153/262 (58%), Gaps = 11/262 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL-RLPLPDVPILAVTATATPVVIDDICT 186
R +I +A+DEAHC+S+WGHDFRP YR L + + D+PI+ +TATATP V +DI
Sbjct: 134 RTVKISFMAVDEAHCISEWGHDFRPEYRNLKTIIKRIGDDIPIVGLTATATPKVQEDILK 193
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICE 245
SL + + F+RPNLY K ++ AD+ + F Q +G S I+YC ++ E
Sbjct: 194 SLGMPNAVTFKASFNRPNLYYEVRPKTKNVDADIIR---FVKQNDGKSGIVYCLSRKRVE 250
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
++ VL NG++ PYHA + K R + +F+ + VVVAT AFGMGIDKPDVR VIH
Sbjct: 251 ELAQVLQVNGVKAVPYHAGLDAKTRVKHQDMFLMEDTDVVVATIAFGMGIDKPDVRFVIH 310
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTM 363
+ PK + +YYQE GRAGRDG C +Y D K M +P QE +
Sbjct: 311 HDIPKSIESYYQETGRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAE----QEIGHAL 366
Query: 364 MKRVEKYLELRTCRRKYLLNHF 385
++ V + E RRK++L++F
Sbjct: 367 LQEVVAFAETSVSRRKFILHYF 388
>gi|336476813|ref|YP_004615954.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
gi|335930194|gb|AEH60735.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
Length = 611
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 155/277 (55%), Gaps = 15/277 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ + A+DEAHC+S+WGHDFRP YR L+ L+ +VPI+A+TATA+P V DI L L
Sbjct: 127 KVSMFAVDEAHCISEWGHDFRPEYRRLNILKKRFRNVPIVALTATASPKVEKDIVKQLSL 186
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
D F+R NL+ K+D R+L + + G S IIYC ++ + E +
Sbjct: 187 EDCRTYRASFNRKNLFYHVKTKKDT----YRQLKAYLKKHRGESGIIYCQSRSMVETLSK 242
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+++G + YHA +S +R+ F++D ++VAT AFGMGIDKPDVR VIHY P
Sbjct: 243 RLNKDGFKTLAYHAGLSDFKREYNQNSFIQDNTDIIVATVAFGMGIDKPDVRFVIHYDLP 302
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K+L +YYQE GR GRDGL C F+ AD K + E ++ + ++++
Sbjct: 303 KNLESYYQETGRGGRDGLPCECVLFFSYADKYKIEYFIEQKKTKEE-RDAALMQLRQMIN 361
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Y E CRRK LL +F + P+ C C
Sbjct: 362 YCESNQCRRKVLLEYF---------GETYPESNCKKC 389
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 163/312 (52%), Gaps = 23/312 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVSQWGHDFRP Y+ L L+ P+LA+TATAT V +D+ +L L
Sbjct: 581 LARIVIDEAHCVSQWGHDFRPDYKELGILKKKFEKTPVLALTATATASVKEDVVQALGLV 640
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
D I F+RPNL+ + K + D+ K EN F+ IIYC +++ CEKV + L
Sbjct: 641 DCIIFRQSFNRPNLWYSVVPKTKKCLDDIDKFIK-ENHFDECGIIYCLSRMDCEKVAEKL 699
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G + YH ++ QR + + KD I ++ AT AFGMGI+KPDVR VIH+ PK
Sbjct: 700 QECGHKAAFYHGNMDAAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS 759
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQP---------------NLNDSE 355
+ Y+QE GRAGRDGL S C +Y +D+ + +MI Q N N
Sbjct: 760 IEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMIVQGQIEQSPWTPGYNRINNTNSDR 819
Query: 356 IQEHSKTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
I E + + R+ Y E CRR L HF G + K CDNC + L
Sbjct: 820 ILEKNTENLLRMVSYCENDVDCRRILQLLHF-GEKFNSGNCK----KTCDNCSQIKALVE 874
Query: 415 EQVPRGGRMVVE 426
+ V + +V+
Sbjct: 875 KDVTETAKQLVQ 886
>gi|404371546|ref|ZP_10976850.1| ATP-dependent DNA helicase RecQ [Clostridium sp. 7_2_43FAA]
gi|404301376|gb|EEH97528.2| ATP-dependent DNA helicase RecQ [Clostridium sp. 7_2_43FAA]
Length = 810
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLM 189
RI IAIDEAHCVSQWGHDFR SYR + L PI+ A TATAT V DI L
Sbjct: 131 RISQIAIDEAHCVSQWGHDFRSSYRRIKNFIEMLNIRPIVTAFTATATEEVKGDIINLLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
LRDP++ TGFDR NL++ D L+ + E + S IIY T+ + + +
Sbjct: 191 LRDPSLFVTGFDRENLFINIEKGNDKKSYILKYI---EENRDSSGIIYAATRKEVDYIYE 247
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L+ NG + YHA ++ + RKE F+KD I ++VAT AFGMGIDKP++R VIHY P
Sbjct: 248 LLTSNGYKAGRYHAGLNDELRKENQEDFIKDKINIMVATNAFGMGIDKPNIRFVIHYNMP 307
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K++ YYQEIGRAGRDG S C + +D + + + + E + + +K++
Sbjct: 308 KNIEGYYQEIGRAGRDGEKSECILLFSPSDIHTQKYLIEVSTENIERKNNQYFKLKQMVD 367
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ C RKY+LN+F G V + C+NC +
Sbjct: 368 LIYSNDCYRKYILNYF-GEDV---------HENCNNCSN 396
>gi|397781462|ref|YP_006545935.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396939964|emb|CCJ37219.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 417
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 157/285 (55%), Gaps = 10/285 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+ ++ +P I LIA+DEAHC+S WGH FRP YR L L+ P VP++A+TATATP V D
Sbjct: 123 LALIASLP-ITLIAVDEAHCISMWGHQFRPEYRSLQVLKERFPQVPMVALTATATPDVRD 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L +P++ F+R NL K++D+ LR + + + IIY T+
Sbjct: 182 DIARQLNLNNPSVYVGSFNRENLRYLVVQKEEDVYERLRGY--LQGRRTDAGIIYTATRD 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L +GI PYHA ++ R+ H F+ + V+ AT AFGMGIDKPDVR
Sbjct: 240 GAETLAARLQADGIPALPYHAGMTAAARERTHDRFMTGKVPVICATSAFGMGIDKPDVRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK L AYYQE GRAGRDG S C FY D + +L +E +++
Sbjct: 300 VVHYDMPKTLEAYYQESGRAGRDGGESDCILFYHDDDAKRLRSFIDRDLPSEFQREVARS 359
Query: 363 MMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++++ Y + CRR+ +L +F T+ P CD C
Sbjct: 360 KLQKMVDYCSIAAGCRRRQILEYFGERFETL------PCSGCDAC 398
>gi|229156395|ref|ZP_04284489.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ATCC 4342]
gi|228627072|gb|EEK83805.1| ATP-dependent DNA helicase RecQ [Bacillus cereus ATCC 4342]
Length = 705
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|423390942|ref|ZP_17368168.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG1X1-3]
gi|401636775|gb|EJS54528.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG1X1-3]
Length = 705
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC++L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICSTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCYTEQCLQSFILQYF---------GEEPGEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|423575539|ref|ZP_17551658.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MSX-D12]
gi|401208864|gb|EJR15624.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MSX-D12]
Length = 705
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYVHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|392373492|ref|YP_003205325.1| ATP-dependent DNA helicase RecQ [Candidatus Methylomirabilis
oxyfera]
gi|258591185|emb|CBE67480.1| ATP-dependent DNA helicase RecQ [Candidatus Methylomirabilis
oxyfera]
Length = 622
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 155/295 (52%), Gaps = 20/295 (6%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL P P L L + + AIDEAHC+SQWGHDFRP YR L +R PDV I A TA
Sbjct: 116 RLVFP--PCLRLLKQAGVAFFAIDEAHCISQWGHDFRPEYRQLKVVREAFPDVAIHAFTA 173
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TATP V DI T L LR+P I+ FDRPNL + D L+++T + G+
Sbjct: 174 TATPRVRADIATELALREPEILVGSFDRPNLVYRVRRRTDR----LQQVTEALERHRGTA 229
Query: 235 -IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGM 293
IIYC + +++ D L R G + YHA ++ +R+ F+ + VVVAT AFGM
Sbjct: 230 GIIYCIRRAEVDQLTDALRRRGYRAVAYHAGLADAERRRTQDDFIAERADVVVATVAFGM 289
Query: 294 GIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND 353
GID+ DVR VIH G PK + Y QE GRAGRDGL S C Y DF I + +
Sbjct: 290 GIDRSDVRYVIHAGMPKSIEHYQQEAGRAGRDGLPSECLLLYSGGDFGLWRSIL---MAE 346
Query: 354 SEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + + Y + CR ++L+N+F + T D C CD C
Sbjct: 347 GLPAPGALPKLSEMYNYCQGAACRHRFLVNYFGQAYRT--------DTCGACDIC 393
>gi|229196988|ref|ZP_04323727.1| ATP-dependent DNA helicase RecQ [Bacillus cereus m1293]
gi|228586477|gb|EEK44556.1| ATP-dependent DNA helicase RecQ [Bacillus cereus m1293]
Length = 705
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|380491813|emb|CCF35054.1| RecQ family ATP-dependent DNA helicase [Colletotrichum higginsianum]
Length = 1601
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 165/288 (57%), Gaps = 14/288 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ I IDEAHCVSQWGHDFRP Y+ L +LR P VPI+A+TATAT VI DI +L +
Sbjct: 835 RLARIVIDEAHCVSQWGHDFRPDYKALGKLRHQFPTVPIIALTATATQNVIVDIKHNLGM 894
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCD 249
+ + F+RPNL K+ +++ + L ++++G IIY ++ E+V +
Sbjct: 895 DSCQVFSQSFNRPNLTYEVRRKEKELIHKIADL--IMSKYDGQCGIIYTLSRKTSEQVAE 952
Query: 250 VL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L S+ G++ YHA ++ + R + + D I VVVAT AFGMGIDKPDVR VIH+
Sbjct: 953 KLRSQYGVKANHYHAQMTPEDRIRVQREWQADKIHVVVATIAFGMGIDKPDVRFVIHHSV 1012
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQ-EHSKTMMKR 366
PK L YYQE GRAGRDG S C F+ D T MI + SE+Q E + M+ R
Sbjct: 1013 PKSLEGYYQETGRAGRDGNPSDCILFFGYQDVATLKKMIA--DGEGSEVQKERQRIMLNR 1070
Query: 367 VEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
V + + R CRR +L +F G + + K CDNCR + E
Sbjct: 1071 VTAFCDNRENCRRVEILRYF-GEVFNSDDCE----KTCDNCRAGAVFE 1113
>gi|284006614|emb|CBA71875.1| ATP-dependent DNA helicase [Arsenophonus nasoniae]
Length = 608
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 172/303 (56%), Gaps = 24/303 (7%)
Query: 125 FLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+P++ VL+A+DEAHC+SQWGHDFRP YR L +LR +P++A+TATA +
Sbjct: 131 FLDRLPKLNPVLLAVDEAHCISQWGHDFRPEYRALGQLRRRFSQLPVIALTATADQTTRN 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L +P + + FDRPN+ K L +L F + Q S I+YC ++
Sbjct: 191 DIIHGLELCEPLVHISSFDRPNIRYTLVEK----YKPLDQLWFFIKGQKGNSGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + QR ++ F KD ++VVVAT AFGMGI+K +VR
Sbjct: 247 SKAEETAERLHKRGLSAAAYHAGLDNTQRAKVQDAFQKDDLQVVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEH 359
V+H+ +++ +YYQE GRAGRDGL++ FY AD + + + +P EI+ H
Sbjct: 307 FVVHFDIARNIESYYQETGRAGRDGLAAEAILFYDPADLSWLRRCLAEKPAGQLQEIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLEL 414
M + E +TCRR LLN+F E++ P CD C R++ +++
Sbjct: 367 KLNAM---SAFAEAQTCRRLVLLNYF-------GENRQQPCGNCDICLDPPKRYDGLIDA 416
Query: 415 EQV 417
++V
Sbjct: 417 QKV 419
>gi|268592895|ref|ZP_06127116.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri DSM 1131]
gi|291311686|gb|EFE52139.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri DSM 1131]
Length = 608
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 164/287 (57%), Gaps = 19/287 (6%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS++ I L+A+DEAHC+SQWGHDFRP YR L +LR LP+VP++A+TATA
Sbjct: 131 FLSQLAGWNITLLAVDEAHCISQWGHDFRPEYRALGQLRQSLPNVPVMALTATADETTRA 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L +P + + FDRPN+ K L +L F + Q + I+YC ++
Sbjct: 191 DIIRLLELHEPLVHVSSFDRPNIRYTLVEK----YKPLDQLWFFIKGQKGKAGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + QR+ + F+KD ++VVVAT AFGMGI+K +VR
Sbjct: 247 SKVEETTERLQKRGLSVAAYHAGLDAAQREWVQDAFLKDNLQVVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEH 359
V H+ P+++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H
Sbjct: 307 FVAHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 367 K---LNAIAAFAEAQTCRRLVLLNYF-------GENRQQPCGNCDIC 403
>gi|407001651|gb|EKE18595.1| hypothetical protein ACD_9C00288G0004 [uncultured bacterium]
Length = 543
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 172/307 (56%), Gaps = 22/307 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAV-TATATPVVIDDICTSLML 190
+ L+A+DEAHCVSQWGHDFRP Y + E L PI+A TATATP V DDI L L
Sbjct: 129 VYLLAVDEAHCVSQWGHDFRPDYLSVKEYISLLKKRPIVAAFTATATPEVKDDIIQRLAL 188
Query: 191 RDPNIINTGFDRPNL--YLAASVKQDD-IMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
++P++ GFDRPNL ++ ++K+ D ++ LR + + + GS IIY T+ E +
Sbjct: 189 KNPDVFVRGFDRPNLKFFVRENLKKKDRVLEALRIVKSIQ----GSGIIYAITRKETEAL 244
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
NG++ YHA ++ +R +I F+++ KV+VAT AFGMG+DK D+R VIH G
Sbjct: 245 AKFFKENGVKAAAYHAGMTGDKRSKIQNEFMENKFKVIVATIAFGMGVDKADIRFVIHVG 304
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND--SEIQEHSKTMM- 364
P YYQE GRAGRDG ++ C + D + ++ N + S+ + + T M
Sbjct: 305 MPSSPEGYYQEAGRAGRDGENAFCILLHSKGDASLHHFFIMANKGEMMSQGKGWADTKMI 364
Query: 365 --------KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQ 416
++++Y+ L+TCRR LL +F SV ++ K CD C + + E
Sbjct: 365 TDIKYSRLDKMKEYVNLQTCRRLLLLEYFGDPSV---KNHSGNCKGCDVCLKYKWEKSEN 421
Query: 417 VPRGGRM 423
+ G R+
Sbjct: 422 LEEGKRV 428
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 159/293 (54%), Gaps = 16/293 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R R+ IDEAHCVSQWGHDFRP Y+ L +R P VPI+A+TATAT V DI
Sbjct: 349 LVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRRRYPSVPIIALTATATKKVELDIL 408
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTKVIC 244
+L +R F+R NL K + D+ ++ + F + IIYC +K C
Sbjct: 409 ENLGIRGCETFKMSFNRANLRYEVRAKTSTVELDI--VSFVQTHFPDCCGIIYCTSKKEC 466
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + + L ++ ++ YHA +S +R + + K KV+VAT AFGMGIDK DVR VI
Sbjct: 467 EMISEKLKKH-MKTAFYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVI 525
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
HY PK L YYQE GRAGRDGL SVC FY D K + + + E ++ K +
Sbjct: 526 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQKEDL 585
Query: 365 KRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLE 413
+ V ++ E +T CRR +L HF + P C CDNCR +++
Sbjct: 586 EAVIQFCENKTDCRRMQVLAHFG--------EKFDPQLCRKTCDNCRRETIVK 630
>gi|422007125|ref|ZP_16354111.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri Dmel1]
gi|414097015|gb|EKT58670.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri Dmel1]
Length = 608
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 164/287 (57%), Gaps = 19/287 (6%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS++ I L+A+DEAHC+SQWGHDFRP YR L +LR LP+VP++A+TATA
Sbjct: 131 FLSQLAGWNITLLAVDEAHCISQWGHDFRPEYRALGQLRQSLPNVPVMALTATADETTRA 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L +P + + FDRPN+ K L +L F + Q + I+YC ++
Sbjct: 191 DIIRLLELHEPLVHVSSFDRPNIRYTLVEK----YKPLDQLWFFIKGQKGKAGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + QR+ + F+KD ++VVVAT AFGMGI+K +VR
Sbjct: 247 SKVEETTERLQKRGLSVAAYHAGLEAAQREWVQDAFLKDNLQVVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEH 359
V H+ P+++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H
Sbjct: 307 FVAHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 367 K---LNAIAAFAEAQTCRRLVLLNYF-------GENRQQPCGNCDIC 403
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/274 (39%), Positives = 149/274 (54%), Gaps = 1/274 (0%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ I +DEAHCVSQWGHDFRP Y L LR P VPI+A+TATA VI D+ + L +
Sbjct: 540 RLARIVVDEAHCVSQWGHDFRPHYTELGALRDKYPQVPIMALTATANARVIKDVKSCLKM 599
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
R+ +++ F+RPNL K + D + + I+YC ++ CE V D
Sbjct: 600 RNVLQLSSSFNRPNLEYQVRKKPKSKLIDEIASFILTSHKDECGIVYCFSRESCETVADD 659
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L ++GI YHA + R ++ + KV+VAT AFGMGIDKPDVR VIH+ PK
Sbjct: 660 LKKHGITAHHYHAKLGKDDRSKVQQRWKNGEYKVIVATIAFGMGIDKPDVRFVIHHSLPK 719
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
L YYQE GRAGRDGL SVC +Y D + + E + S ++ ++++
Sbjct: 720 SLEGYYQETGRAGRDGLDSVCILYYSWTDVRRMENMMLSEEKSQEAIDRSIDSLREMQRF 779
Query: 371 LELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCC 403
E CRR +L +F S T + + D CC
Sbjct: 780 CENEIECRRVQVLRYFGESGFTSEQCRSTCDNCC 813
>gi|374594551|ref|ZP_09667555.1| ATP-dependent DNA helicase RecQ [Gillisia limnaea DSM 15749]
gi|373869190|gb|EHQ01188.1| ATP-dependent DNA helicase RecQ [Gillisia limnaea DSM 15749]
Length = 701
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 155/286 (54%), Gaps = 19/286 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FLS ++ LIAIDEAHC+S WGHDFRP+Y L L+ P P++A+TATA DI
Sbjct: 125 FLSD-GKVSLIAIDEAHCISSWGHDFRPAYTQLGYLKNRFPSTPLIALTATADKATRKDI 183
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
C L + FDR NL L K+ D + D K E S IIYC ++
Sbjct: 184 CNQLNIPGAKKHVASFDRKNLSLEVRPGTKRFDQIVDFIKARKNE-----SGIIYCLSRK 238
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E + L NG+Q YHA +S +R +I F+ D +++ AT AFGMGIDK ++R
Sbjct: 239 NTEDIAAKLKANGLQAEAYHAGLSHLERTKIQDDFINDTKQIICATIAFGMGIDKSNIRW 298
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY PK+L YYQEIGRAGRDGL S F+ AD + F N + +Q
Sbjct: 299 VIHYNMPKNLEGYYQEIGRAGRDGLPSDTMLFHSYADVVQLQK-FATNSGNEAVQ---LA 354
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ R+++Y E TCRRK LLN+F E ++ CD CR+
Sbjct: 355 KLDRMKQYSEALTCRRKILLNYF-------GELKIEDCGNCDICRN 393
>gi|355625895|ref|ZP_09048451.1| ATP-dependent DNA helicase RecQ [Clostridium sp. 7_3_54FAA]
gi|354821122|gb|EHF05518.1| ATP-dependent DNA helicase RecQ [Clostridium sp. 7_3_54FAA]
Length = 618
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 147/267 (55%), Gaps = 20/267 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++ +DEAHCVSQWG DFRPSY + E LP P+L A TATAT V DD+ L L
Sbjct: 130 IAMVVVDEAHCVSQWGQDFRPSYLKIMEFIDKLPKRPVLSAFTATATKEVRDDVIDILRL 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFE----GSTIIYCPTKVICEK 246
R+PN++ TGFDRPNL+ + +D + +N E S IIYC T+ E+
Sbjct: 190 REPNVVTTGFDRPNLWFSVQAPKD-------RYATMKNYIECHPGQSGIIYCLTRKTVEE 242
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V L++ G YHA +S +RK F+ D ++VAT AFGMGIDK DVR VIHY
Sbjct: 243 VSGRLAKEGFLVTRYHAGLSDAERKRNQEDFIYDRRSLMVATNAFGMGIDKSDVRFVIHY 302
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQE 358
PK++ +YYQE GRAGRDG + C Y D N N ++ E ++E
Sbjct: 303 NMPKNIESYYQEAGRAGRDGEPAECILLYGGQDVVTNQFFIDNNQDNDELDFAAREFVKE 362
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHF 385
+ ++R+ Y C R Y+L +F
Sbjct: 363 RDRERLRRMTYYCFTNECLRDYILRYF 389
>gi|323482952|ref|ZP_08088350.1| hypothetical protein HMPREF9474_00099 [Clostridium symbiosum
WAL-14163]
gi|323691612|ref|ZP_08105875.1| ATP-dependent DNA helicase RecQ [Clostridium symbiosum WAL-14673]
gi|323403732|gb|EGA96032.1| hypothetical protein HMPREF9474_00099 [Clostridium symbiosum
WAL-14163]
gi|323504338|gb|EGB20137.1| ATP-dependent DNA helicase RecQ [Clostridium symbiosum WAL-14673]
Length = 618
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 147/267 (55%), Gaps = 20/267 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++ +DEAHCVSQWG DFRPSY + E LP P+L A TATAT V DD+ L L
Sbjct: 130 IAMVVVDEAHCVSQWGQDFRPSYLKIMEFIDKLPKRPVLSAFTATATKEVRDDVIDILRL 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFE----GSTIIYCPTKVICEK 246
R+PN++ TGFDRPNL+ + +D + +N E S IIYC T+ E+
Sbjct: 190 REPNVVTTGFDRPNLWFSVQAPKD-------RYATMKNYIECHPGQSGIIYCLTRKTVEE 242
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V L++ G YHA +S +RK F+ D ++VAT AFGMGIDK DVR VIHY
Sbjct: 243 VSGRLAKEGFLVTRYHAGLSDAERKRNQEDFIYDRRSLMVATNAFGMGIDKSDVRFVIHY 302
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQE 358
PK++ +YYQE GRAGRDG + C Y D N N ++ E ++E
Sbjct: 303 NMPKNIESYYQEAGRAGRDGEPAECILLYGGQDVVTNQFFIDNNQDNDELDFAARELVKE 362
Query: 359 HSKTMMKRVEKYLELRTCRRKYLLNHF 385
+ ++R+ Y C R Y+L +F
Sbjct: 363 RDRERLRRMTYYCFTNECLRDYILRYF 389
>gi|87201212|ref|YP_498469.1| ATP-dependent DNA helicase RecQ [Novosphingobium aromaticivorans
DSM 12444]
gi|87136893|gb|ABD27635.1| ATP-dependent DNA helicase RecQ [Novosphingobium aromaticivorans
DSM 12444]
Length = 600
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 147/282 (52%), Gaps = 25/282 (8%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ + AIDEAHCVS+WGHDFRP YR L L PDVP LA+TATA DI L +
Sbjct: 137 RVAMFAIDEAHCVSEWGHDFRPDYRLLRPLMDAFPDVPRLALTATADRHTRADILAQLGI 196
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+ +I GFDRPN+ V +D+ LR+L + G I+Y PT+ EK+
Sbjct: 197 PEEGLIVAGFDRPNIRYGI-VPRDN---PLRQLMTVIAENPGPGIVYAPTRAQVEKLSQQ 252
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L +G PYHA + + R FV V+VAT AFGMGIDKPDVR V H PK
Sbjct: 253 LGASGRPVLPYHAGLDPQVRAANQAAFVASEDMVMVATVAFGMGIDKPDVRFVAHAACPK 312
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH----SKTMMKR 366
+ +YYQE GRAGRDG SV + DF + +E++EH +T +
Sbjct: 313 SIESYYQETGRAGRDGDPSVAVMLWGAEDFVRARQRL------AEVEEHRRAGERTRIDA 366
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E CRR LL HF + PP C CDNC
Sbjct: 367 LASLVETPHCRRALLLRHF---------GETPPPSCGNCDNC 399
>gi|332289590|ref|YP_004420442.1| ATP-dependent DNA helicase RecQ [Gallibacterium anatis UMN179]
gi|330432486|gb|AEC17545.1| ATP-dependent DNA helicase RecQ [Gallibacterium anatis UMN179]
Length = 613
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 159/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ IAIDEAHC+SQWGHDFRP Y L L P +PI+A+TATA V +DI L L
Sbjct: 145 QVSFIAIDEAHCISQWGHDFRPEYSQLRSLTRVFPHIPIMALTATADRVTREDILELLNL 204
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+ P + FDRPN+ K +L F +G S IIY ++ E++ +
Sbjct: 205 QQPFVYIGSFDRPNIRYTVVEK----FKPQEQLLKFVKSQKGKSGIIYANSRNKVERLAE 260
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L R GI + YHA S + R+++ F +D I+++VAT AFGMGI+KP++R V+HY P
Sbjct: 261 MLQRKGISAKAYHAGFSNEIREQVQHDFQRDNIQIIVATIAFGMGINKPNIRFVLHYDLP 320
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEHSKTMMKRV 367
+ + AYYQE GRAGRD L + FY D+ N + Q P+ + I++H ++ +
Sbjct: 321 RSIEAYYQETGRAGRDDLPAEAVLFYDHQDYLWLNKLLQEKPDSSQKMIEQHK---LQAM 377
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ E +TCRR LLN+F AE + P CD C
Sbjct: 378 GEFAEAQTCRRLVLLNYF-------AEHRHQPCNNCDIC 409
>gi|296121484|ref|YP_003629262.1| ATP-dependent DNA helicase RecQ [Planctomyces limnophilus DSM 3776]
gi|296013824|gb|ADG67063.1| ATP-dependent DNA helicase RecQ [Planctomyces limnophilus DSM 3776]
Length = 779
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 170/305 (55%), Gaps = 14/305 (4%)
Query: 111 LSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL 170
LS RL + D + FL ++P + ++AIDEAHC+S WGHDFRP YR LS L+ P +PI
Sbjct: 161 LSPERL-MTDRMLGFLEQVP-LSMLAIDEAHCISDWGHDFRPEYRMLSGLKDRFPQLPIH 218
Query: 171 AVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF 230
A TATAT V DI L L +P FDRPNL ++D D + ++
Sbjct: 219 AFTATATQEVRQDIARQLGLANPQFHVGSFDRPNLIYRVIPREDR---DQQVISTIRRHP 275
Query: 231 EGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCA 290
S ++YC + + V +L + G + PYHA + ++R F+ D ++++VAT A
Sbjct: 276 GESGVVYCLRRKDVDDVTTMLKQAGFRALPYHAGLPDEERHANQHAFLNDHVEIIVATVA 335
Query: 291 FGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPN 350
FGMGIDK DVR VIH GAPK L AY QE GRAGRDGL + C+ FY DF + Q N
Sbjct: 336 FGMGIDKSDVRFVIHTGAPKSLEAYQQESGRAGRDGLDAECWLFYAQGDFALWRSL-QAN 394
Query: 351 LNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
L + + Q+ ++ ++ +E + + CR + ++ +F G + E CD C E
Sbjct: 395 LPE-KAQQTAQQVLAGMEGFCQSTKCRHRAIIEYF-GQAGESGEC-----GACDICL-GE 446
Query: 411 MLELE 415
+ E+E
Sbjct: 447 LTEVE 451
>gi|269861548|ref|XP_002650477.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066069|gb|EED43580.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 156/281 (55%), Gaps = 15/281 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ IDEAHCVSQWGHDFRP Y+ LS+L+ P VPI+A+TATAT V DI L +
Sbjct: 397 KVCRFVIDEAHCVSQWGHDFRPDYKELSKLKQSYPTVPIIALTATATKKVEVDIINVLNI 456
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
++ I + F+RPNL K + D+ N + + IIYC +K CEK+ +
Sbjct: 457 QNCKIFKSSFNRPNLIYRVLPKTATTILDIVSFIN-SHYADSPGIIYCTSKKECEKMAEE 515
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LSR+ ++ YH +S R I + +++AT AFGMGIDKPDVR VIHY PK
Sbjct: 516 LSRD-LKITYYHGGLSKYDRIRIQEQWNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPK 574
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS-EIQEHSKTMMKRVEK 369
L YYQE GRAGRDGL S+C +Y AD N + + N + E ++ K + V K
Sbjct: 575 SLEGYYQETGRAGRDGLESICILYYSYADTKVINFLITRSYNTTAEQKQRQKEELFNVVK 634
Query: 370 YLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNC 406
Y E + CRRK +L +F + D C CDNC
Sbjct: 635 YCENKVECRRKQVLKYF--------NEEFSSDMCNKTCDNC 667
>gi|414079433|ref|YP_007000857.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
gi|413972712|gb|AFW96800.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
Length = 729
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/303 (40%), Positives = 169/303 (55%), Gaps = 25/303 (8%)
Query: 109 RCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP 168
R +SE LPL DV + I AIDEAHCVS+WGHDFRP YR L LR PDVP
Sbjct: 119 RLVSERFLPLLDV----VKEKVGISTFAIDEAHCVSEWGHDFRPEYRQLRLLRKRYPDVP 174
Query: 169 ILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFEN 228
+A+TATAT V DI L L+ P+I F+R NL+ K + A+L ++ EN
Sbjct: 175 TIALTATATDRVRADIIEQLGLKQPSIHIASFNRQNLHYEVRSKSNRAYAELLEIVR-EN 233
Query: 229 QFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVAT 288
EGS IIYC T+ +++ L + + PYHA +S ++R + F++D ++V+VAT
Sbjct: 234 --EGSGIIYCLTRKKVDEITLKLQNDKVSVLPYHAGLSDEERSKNQTRFIRDDVRVMVAT 291
Query: 289 CAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ 348
AFGMGI+KPDVR V+H P++L +YYQE GRAGRD S C F+ D +
Sbjct: 292 VAFGMGINKPDVRFVVHSDLPRNLESYYQESGRAGRDDEPSKCTLFFNYGDIK----TIE 347
Query: 349 PNLN---DSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--C 403
++N D + Q +K +++V Y E CRR L++F + P C C
Sbjct: 348 WSINQKPDPQEQLIAKQQLRQVIDYAEGTDCRRTIQLSYF---------GERFPGNCGNC 398
Query: 404 DNC 406
DNC
Sbjct: 399 DNC 401
>gi|422015295|ref|ZP_16361894.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
gi|414099460|gb|EKT61101.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
Length = 608
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 164/287 (57%), Gaps = 19/287 (6%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS++ I L+A+DEAHC+SQWGHDFRP YR L +LR PDVP++A+TATA
Sbjct: 131 FLSQLANWNIALLAVDEAHCISQWGHDFRPEYRALGQLRQHFPDVPVMALTATADETTRA 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI L L +P + + FDRPN+ K L +L F +G + I+YC ++
Sbjct: 191 DIIRLLALDNPLVQVSSFDRPNIRYTLVEK----YKPLEQLWFFIKAQKGKAGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + +QR+ + F+KD +++VVAT AFGMGI+K +VR
Sbjct: 247 NKVEETAERLQKRGLSVAAYHAGLDSQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEH 359
V H+ P+++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H
Sbjct: 307 FVAHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGVQQDIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 367 K---LNAIAAFAEAQTCRRLVLLNYF-------GENRQTPCGNCDIC 403
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 153/282 (54%), Gaps = 13/282 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVSQWGHDFRP Y+ L ++ P VP+LA+TATAT +V D+ ++L ++
Sbjct: 993 LARIVIDEAHCVSQWGHDFRPDYKALGDVVRQFPGVPVLALTATATKLVRSDVVSNLGIQ 1052
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ F+RPNL K I+ + +L E S IIYC ++ CE+V L
Sbjct: 1053 GCQEFSQSFNRPNLSYEVLPKGKGIINSIAELIK-ERYVGKSGIIYCLSRKSCEQVAQKL 1111
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
S GI+ YHA + R E+ + K+ V+VAT AFGMGIDK DVR VIH+ PK
Sbjct: 1112 SDMGIRAYHYHAGMDSADRSEVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKS 1171
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQE GRAGRDG S CY +Y AD + E ++ M++ V +Y
Sbjct: 1172 LEGYYQETGRAGRDGKRSECYLYYLYADSRILRKMIDEGEGSREQKQRLSDMLRTVIQYC 1231
Query: 372 ELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHN 409
E + CRR +L +F P KC CDNCR +
Sbjct: 1232 ENKADCRRAQVLGYF--------SEAFDPAKCNSTCDNCRSD 1265
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 158/283 (55%), Gaps = 16/283 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I + IDEAHCVSQWGHDFR Y+ L +LR L VP +A+TATATP V D+ +L +
Sbjct: 1009 IARVVIDEAHCVSQWGHDFRKDYKELGKLRTGLRGVPFMALTATATPQVQQDLMRNLSIT 1068
Query: 192 DPNIINTGFDRPNLY--LAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVC 248
F+RPNL + VK ++ D+ L + ++G I+YC +K CE+V
Sbjct: 1069 KCKTFKQSFNRPNLVYEVLEKVKGGQVVQDIINL--IQTSYKGKCGIVYCLSKNDCEQVS 1126
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + I YHA ++ +R+ + + +KV+VAT AFGMGIDKPDVR VIH+
Sbjct: 1127 SHLQKARILANFYHAGLTTDERRNVQKRWQCGELKVIVATIAFGMGIDKPDVRFVIHHSI 1186
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ-EHSKTMMKRV 367
PK L YYQE GRAGRDG S CY FY D + + + ++ +H KTM++ V
Sbjct: 1187 PKSLEGYYQETGRAGRDGKISGCYLFYSGNDMMRILKMIETGEGATDFTIDHGKTMVRAV 1246
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCR 407
Y + + CRR +L +F AE P D K CDNC+
Sbjct: 1247 ANYCDNKVECRRMQVLRYF-------AERYDPADCKKTCDNCK 1282
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 14 EHSKTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTMAESQVPPD--KCCDNCRQVVYMTP 70
+H KTM++ V Y + + CRR +L +F AE P D K CDNC+ + TP
Sbjct: 1237 DHGKTMVRAVANYCDNKVECRRMQVLRYF-------AERYDPADCKKTCDNCKSGIKYTP 1289
Query: 71 EYVTNNTSFLSRIPRIVLIAIDEAH 95
VT+ + VL +D A
Sbjct: 1290 RDVTDEA-------KAVLSIVDGAQ 1307
>gi|365990115|ref|XP_003671887.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
gi|343770661|emb|CCD26644.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
Length = 1434
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 164/283 (57%), Gaps = 14/283 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ + +DEAHCVS WGHDFRP Y+ L + PDVP++A+TATA+ V DI +L L
Sbjct: 791 KLARVVVDEAHCVSNWGHDFRPDYKELKYFKREYPDVPMMALTATASEQVRMDIIHNLEL 850
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIM---ADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+DP + F+R NLY K + + AD+ K + F NQ + IIYC +K CE+
Sbjct: 851 KDPVFLKQSFNRTNLYYEVRKKNKNTIFEIADMIK-SKFRNQ---TGIIYCHSKNSCEQT 906
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ + R GI++ YHA + R +I + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 907 SNQMQRAGIKSAYYHAGMEPDDRLKIQKAWQADEIQVICATVAFGMGIDKPDVRFVFHFT 966
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKR 366
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++
Sbjct: 967 VPRTLEGYYQETGRAGRDGKYSYCITYFCFRDVRTMQTMIQKDENLDRENKEKHLNKLQQ 1026
Query: 367 VEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
V Y + T CRRK +L++F +S++ K CDNC++
Sbjct: 1027 VMAYCDNATDCRRKLVLSYFNED----FDSKL-CHKNCDNCKN 1064
>gi|407040860|gb|EKE40365.1| recQ family DNA helicase [Entamoeba nuttalli P19]
Length = 508
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 159/286 (55%), Gaps = 23/286 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L + ++ + A+DEAHC+SQWGHDFRPSY LS L+ PD+PI+A+TATAT V +DI
Sbjct: 151 LYSVKKLGMFAVDEAHCISQWGHDFRPSYLELSYLKKTYPDIPIIALTATATSKVKEDII 210
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVIC 244
SL L++P I + FDRPN+Y + +D ++ LT +Q E IIYC T++ C
Sbjct: 211 KSLELKNPQIFTSSFDRPNIYFKV-IYKDLYETPIQILTQILHQHEKEGGIIYCSTRMEC 269
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + +S NG YHA + ++R+ I + + VVVAT AFGMGID+ DVR VI
Sbjct: 270 ELIEKYISTNGYPVAKYHAGMKSEERETIQKKWESGEVNVVVATIAFGMGIDRGDVRFVI 329
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+ PK + + QE GRAGRDG + + DF + + N SEI
Sbjct: 330 HWNIPKTIEGFMQEAGRAGRDGKPAESIILFSNDDFEREVAL---NQETSEI-------- 378
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDK-CCDNCRHN 409
+ + +CRRK LL +F E+ P+K CCD C N
Sbjct: 379 --IRELCVECSCRRKCLLKYF-------GETTFKPNKRCCDLCNEN 415
>gi|418677623|ref|ZP_13238897.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418685897|ref|ZP_13247068.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|421089357|ref|ZP_15550168.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
200802841]
gi|421131429|ref|ZP_15591611.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
2008720114]
gi|400320813|gb|EJO68673.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410001970|gb|EKO52496.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
200802841]
gi|410357212|gb|EKP04479.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
2008720114]
gi|410739592|gb|EKQ84319.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
Length = 621
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 156/282 (55%), Gaps = 18/282 (6%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLMLRDP 193
IA+DEAHCVSQWGHDFRP YR L ELR P +P++A+TATAT VI DI SL L++P
Sbjct: 143 IAVDEAHCVSQWGHDFRPEYRKLYELRDKYPKPIPVVALTATATSRVIKDISDSLGLKNP 202
Query: 194 NIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+I F R NL + Q++I + L KL NF+ G I+YC T+ E V
Sbjct: 203 ILIKGSFYRENLSFSVRFPQNEISRENELLKLLVQGNFQKVSSGRVIVYCATRQKVETVY 262
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L +NG + YHA + R++ + V+VAT AFGMG+D+P+VR VIHY
Sbjct: 263 GFLKKNGFKVGKYHAGRTDSSREKTQDGYNNGKTNVLVATNAFGMGLDQPNVRLVIHYQI 322
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
P L +YYQE GRAGRDG S C FY +D I N ++ +T++ ++
Sbjct: 323 PASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----RKGGETLLSHLK 378
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+Y CR++ L ++F + ++ P K CD C E
Sbjct: 379 EYSISNKCRQQTLCSYF--------DEEILPCKTCDICLEKE 412
>gi|398341124|ref|ZP_10525827.1| ATP-dependent DNA helicase RecQ [Leptospira kirschneri serovar Bim
str. 1051]
Length = 600
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 156/282 (55%), Gaps = 18/282 (6%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLMLRDP 193
IA+DEAHCVSQWGHDFRP YR L ELR P +P++A+TATAT VI DI SL L++P
Sbjct: 122 IAVDEAHCVSQWGHDFRPEYRKLYELRDKYPKPIPVVALTATATSRVIKDISDSLGLKNP 181
Query: 194 NIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+I F R NL + Q++I + L KL NF+ G I+YC T+ E V
Sbjct: 182 ILIKGSFYRENLSFSVRFPQNEISRENELLKLLVQGNFQKVSSGRVIVYCATRQKVETVY 241
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L +NG + YHA + R++ + V+VAT AFGMG+D+P+VR VIHY
Sbjct: 242 GFLKKNGFKVGKYHAGRTDSSREKTQDGYNNGKTNVLVATNAFGMGLDQPNVRLVIHYQI 301
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
P L +YYQE GRAGRDG S C FY +D I N ++ +T++ ++
Sbjct: 302 PASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----RKGGETLLSHLK 357
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+Y CR++ L ++F + ++ P K CD C E
Sbjct: 358 EYSISNKCRQQTLCSYF--------DEEILPCKTCDICLEKE 391
>gi|387793516|ref|YP_006258581.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379656349|gb|AFD09405.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 705
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 150/279 (53%), Gaps = 15/279 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+AIDEAHC+S WGHDFRP Y LS L+ DVPI+A+TATA V DI L L
Sbjct: 130 IQLLAIDEAHCISSWGHDFRPEYTQLSILKERFSDVPIVALTATADRVTRKDIIRQLNLH 189
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P FDRPNL L D + ++ S IIYC ++ E++ + L
Sbjct: 190 KPATFVASFDRPNLNLEVKTGIKTRQKDQEIVQFIHSKPNQSGIIYCLSRKTTEELAEKL 249
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ + YHA +S R E F+ D ++VV AT AFGMGIDK +VR VIHY PK+
Sbjct: 250 REHQVNAAAYHAGMSADDRNETQEDFINDRVQVVCATVAFGMGIDKSNVRWVIHYNLPKN 309
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQEIGRAGRDGL S +Y D ++ S+ +E + +KR++++
Sbjct: 310 IEGYYQEIGRAGRDGLESETILYYNLVDI----VLLTQFAEQSQQRELNLEKLKRIQQFA 365
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
E CRRK L+N+F + D C CD C++
Sbjct: 366 EADICRRKILINYF---------GENFEDSCGNCDVCKN 395
>gi|300727023|ref|ZP_07060442.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
gi|299775567|gb|EFI72158.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
Length = 642
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 171/311 (54%), Gaps = 27/311 (8%)
Query: 109 RCLS-ELRLP-------LPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSEL 160
RCLS +L+L L ++P LF S +I L AIDEAHC+SQWGHDFRP Y L +
Sbjct: 100 RCLSGDLKLIYVSPEKLLSEIPYLFKS--IKISLFAIDEAHCISQWGHDFRPEYANLGII 157
Query: 161 RLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAA--SVKQDDIMA 218
P +P++A+TATA + DI L L I++ FDRPNL LA ++ + +
Sbjct: 158 HESFPGIPVMALTATADKLTRQDIVKLLHLNGRTFISS-FDRPNLSLAVKRGYRKKEKLQ 216
Query: 219 DLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLF 277
+ +L G IIYC ++ EKV + LS + GI YHA +S ++R I F
Sbjct: 217 YISRLMQRHPGEAG--IIYCLSRKNAEKVAEELSASTGINCEAYHAGMSTQERARIQEGF 274
Query: 278 VKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKT 337
D I+VV AT AFGMGIDK +VR V+HY PK + ++YQEIGRAGRDG + FY
Sbjct: 275 KMDQIQVVCATIAFGMGIDKSNVRWVVHYNLPKSIESFYQEIGRAGRDGAPAETVLFYSL 334
Query: 338 ADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQV 397
AD + + DS Q + +KR+++Y E + CRR+ LLN+F E
Sbjct: 335 ADIIQ----LRKFAEDSGQQGINMEKLKRMQEYAEAQVCRRRILLNYF-------GEQTA 383
Query: 398 PPDKCCDNCRH 408
K CD C +
Sbjct: 384 HECKHCDICEN 394
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 156/277 (56%), Gaps = 11/277 (3%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
I IDEAHCVSQWGHDFRP Y+ LS LR P VPILA+TATAT V +D+ +L +R+P
Sbjct: 651 IVIDEAHCVSQWGHDFRPDYKELSILRRKFPKVPILALTATATERVRNDVIYNLSMRNPV 710
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
F+RPNL K ++ D+ K + + S I+YC +K CE V L
Sbjct: 711 CFKQSFNRPNLIYQVLKKTKQVVDDMSKFIH-STYPDKSGIVYCISKYDCENVAKRLREL 769
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
I YHA + +R ++ + K IKV+VAT AFGMGI+K DVR VIH+ PK L
Sbjct: 770 KISAAHYHAGLENDERAKVQANWQKGRIKVIVATIAFGMGINKADVRFVIHHSVPKSLEG 829
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH----SKTMMKRVEKY 370
YYQE GRAGRDG S C ++ AD +N+++ Q + + H ++ + ++ Y
Sbjct: 830 YYQESGRAGRDGGISHCLLYFSWADKLRNDLLIQNSFTSGQGSSHNTRETRDSLNKMVNY 889
Query: 371 LELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E T CRR+ L +F G + + + K CDNC
Sbjct: 890 CENETDCRRQLQLAYF-GENFEKSGCK----KTCDNC 921
>gi|428773638|ref|YP_007165426.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
gi|428687917|gb|AFZ47777.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
Length = 713
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 151/279 (54%), Gaps = 19/279 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I AIDEAHC+S+WGHDFR YR + LR P VPI A+TATAT V DI L LR
Sbjct: 135 IAAFAIDEAHCISEWGHDFRQEYRQMRYLRQQFPQVPITALTATATVRVQRDIIEQLNLR 194
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+P I F+R NLY K+ +L + +GS I+YC ++ E++ + L
Sbjct: 195 NPQIHRFSFNRQNLYYEVQEKE---RRAYNQLLHIIRSHQGSGIVYCISRKSTEEIAERL 251
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
++G+ PYHA +S K R F++D ++++VAT AFGMGI+KPDVR V+HY P++
Sbjct: 252 VKDGVSALPYHAGLSDKVRSHYQTSFIRDDVRIMVATVAFGMGINKPDVRLVVHYDLPRN 311
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ +YYQE GRAGRDG + C Y D K + + N E Q+ + + +V +Y
Sbjct: 312 IESYYQESGRAGRDGEKANCILLYSRGDKQKIHYFIRQKTNPQE-QKIAYAQLAKVIEYA 370
Query: 372 ELRTCRR----KYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ CRR Y FKG CDNC
Sbjct: 371 DTNYCRRIPQLSYFGEKFKGDCGN-----------CDNC 398
>gi|381179157|ref|ZP_09888016.1| ATP-dependent DNA helicase RecQ [Treponema saccharophilum DSM 2985]
gi|380768920|gb|EIC02900.1| ATP-dependent DNA helicase RecQ [Treponema saccharophilum DSM 2985]
Length = 624
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 165/297 (55%), Gaps = 12/297 (4%)
Query: 116 LPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTAT 175
L P + L R+ + IDEAHCVSQWGHDFRP Y +S +R D LA+TAT
Sbjct: 122 LATPRINDLLHDANVRVRCVTIDEAHCVSQWGHDFRPDYLEISAVRKQFKDAVFLALTAT 181
Query: 176 ATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTI 235
AT VV +DI +L L +P ++ + FDRPN++L+ K+ D + + E I
Sbjct: 182 ATDVVRNDIIRNLALNNPAVLLSSFDRPNIFLSVQQKRKDGFEQI--VECIERHKGECGI 239
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGI 295
IYC +K + + + L G YHA ++ + R E F++D ++++VAT AFGMGI
Sbjct: 240 IYCFSKRDVDSLAERLRAEGYSALNYHAGLTNEVRAENQERFIRDDVQIMVATLAFGMGI 299
Query: 296 DKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE 355
+KPDVR VIH PK + YYQE+GRAGRDGL S Y AD K ++F +DS
Sbjct: 300 NKPDVRFVIHQTMPKSVEQYYQEVGRAGRDGLPSEALLLYSGADLFKIRLLF----DDSA 355
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEML 412
++ S+ ++ + ++ + CRR+ LL++F S E CCD C + ++
Sbjct: 356 DKDRSERLLAGMRTFVTSQVCRRRTLLSYFGESYSGENEC------CCDICTTDSVM 406
>gi|157963641|ref|YP_001503675.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
gi|157848641|gb|ABV89140.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
Length = 607
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 154/276 (55%), Gaps = 17/276 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA DIC L +
Sbjct: 140 VSLFAIDEAHCISQWGHDFRPEYAALGRLRQQFPQVPIMALTATADKATRADICERLTI- 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P+ + T FDRPN+ + K + LR+ + +N G I+YC ++ ++V + L
Sbjct: 199 TPHSLLTSFDRPNIRYTVAEKLN-AANQLRQFVDAQNGASG--IVYCSSRRRVDEVAERL 255
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G Q YHA + ++R E+ F+KD + +VVAT AFGMGI+K +VR V+HY PK
Sbjct: 256 RLQGHQAEAYHAGKTQEERAEVQDKFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKS 315
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ +YYQE GRAGRDGL S + AD + ++I Q + E K + + +
Sbjct: 316 VESYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHK--LNTMAAF 373
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +TCRR+ LL++F P K C NC
Sbjct: 374 AEAQTCRRQVLLHYFDE----------PALKACGNC 399
>gi|225571035|ref|ZP_03780052.1| hypothetical protein CLOHYLEM_07133 [Clostridium hylemonae DSM
15053]
gi|225160116|gb|EEG72735.1| hypothetical protein CLOHYLEM_07133 [Clostridium hylemonae DSM
15053]
Length = 611
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 154/303 (50%), Gaps = 30/303 (9%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++A+DEAHCVSQWG DFRPSY + LP P++ A TATAT V DI L L
Sbjct: 130 ISMVAVDEAHCVSQWGQDFRPSYLKIVTFIEKLPKRPVVSAFTATATAEVRADIADILRL 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
R+P + TGFDRPNLY A +D A L N+ + +G S IIYC T+ E VC
Sbjct: 190 REPLVTTTGFDRPNLYFAVQSPKDKFAA----LLNYVERHKGESGIIYCLTRKYVEDVCA 245
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L G YHA + +RK F+ D ++VAT AFGMGIDK +VR V+HY P
Sbjct: 246 RLQAEGFSVTRYHAGLGDGERKSNQEDFIYDRADIMVATNAFGMGIDKSNVRYVVHYNMP 305
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K++ +YYQE GRAGRDG +S C Y D N + N + E+ E + ++K ++
Sbjct: 306 KNMESYYQEAGRAGRDGEASECILLYGGQDVVTNQLFIDNNRENDELDEFTAEVVKERDR 365
Query: 370 --------YLELRTCRRKYLLNHF----------------KGSSVTVAESQVPPDKCCDN 405
Y C R Y+L +F + +V V ES C
Sbjct: 366 ERLRKMTFYCFTNECLRDYILRYFGEYGENYCGNCSNCLSQFETVDVTESAAAVVNCVSA 425
Query: 406 CRH 408
CR
Sbjct: 426 CRQ 428
>gi|395213964|ref|ZP_10400385.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394456500|gb|EJF10790.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 726
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 158/284 (55%), Gaps = 18/284 (6%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R I +AIDEAHC+S+WGHDFRP YR + + + ++PI+A+TATATP V DI +
Sbjct: 132 RASNISFVAIDEAHCISEWGHDFRPEYRRIRGIIDQIGNLPIIALTATATPKVQLDIQRN 191
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L + + ++ + F+R NLY K + +++ + + +G S +IYC ++ E+
Sbjct: 192 LQMDEASVFKSSFNRTNLYYEVRPKHNT----KKQVIQYVKKHKGKSGVIYCLSRKKVEE 247
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ ++L N I+ PYHA + R F+ + V+VAT AFGMGIDKPDVR VIHY
Sbjct: 248 IAELLRVNDIKALPYHAGLDSNIRMANQDAFLNEEADVIVATIAFGMGIDKPDVRFVIHY 307
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQE--HSKTMM 364
PK + YYQE GRAGRDGL C FY D K + D + E +SK ++
Sbjct: 308 DTPKSIEGYYQETGRAGRDGLEGNCIMFYSYDDIIK----LEKFNKDKPVTERDNSKLLL 363
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
+ + Y + CRRK LL++F E+ CDNC H
Sbjct: 364 QEMAAYADSAVCRRKQLLHYF-------GEAYEKDCGFCDNCLH 400
>gi|367001388|ref|XP_003685429.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
gi|357523727|emb|CCE62995.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
Length = 1280
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 171/306 (55%), Gaps = 24/306 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + P +P++A+TATA V DI +L +
Sbjct: 669 KLARIVVDEAHCVSNWGHDFRPDYKELKLFKREYPTIPLIALTATANEQVQLDIINNLGV 728
Query: 191 RDPNIINTGFDRPNLYLAASVKQ----DDIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
R+P ++ F+R NL K ++I + L+ T+F+NQ S IIYC +K+ CE+
Sbjct: 729 RNPLLLKQSFNRTNLDYIIRTKSKNTVNEICSSLK--TDFKNQ---SGIIYCNSKISCEQ 783
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
V ++ I+ YHA ++ +R +I + + ++V+ AT AFGMGIDKPDVR VIH+
Sbjct: 784 VAQQIASQKIRTAFYHAGMTPSERLKIQKAWQNNQVQVICATVAFGMGIDKPDVRFVIHF 843
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEHSKTMM 364
P+ L YYQE GRAGRDGL + C T++ D + Q +LN +H + +
Sbjct: 844 TIPRTLEGYYQETGRAGRDGLPAQCITYFSFKDVRSLQTMIQRDKSLNKENKLKHLEKLQ 903
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLELEQ--VPR 419
+ V + TCRR+ +L +F + P C CDNCR++ +E+ V
Sbjct: 904 QVVSYCDNVTTCRRQQVLKYFN--------EDIDPSVCLKQCDNCRNSGNFSIEERDVTN 955
Query: 420 GGRMVV 425
+M++
Sbjct: 956 EAKMII 961
>gi|209527293|ref|ZP_03275803.1| ATP-dependent DNA helicase RecQ [Arthrospira maxima CS-328]
gi|209492281|gb|EDZ92626.1| ATP-dependent DNA helicase RecQ [Arthrospira maxima CS-328]
Length = 739
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL R+ I + IDEAHCVS WGHDFRP YR + ++R P VP +A+TATAT V
Sbjct: 135 FLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTATATERVR 194
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI ++L+ P + F R NLY KQ +L GS IIYC ++
Sbjct: 195 FDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPK--KRFPQLLKVIESMSGSGIIYCSSR 252
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L N I PYHA ++ R E H F++D ++++VAT AFGMGIDKPDVR
Sbjct: 253 KRVEEVALKLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVR 312
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
VIHY PK L YYQE GRAGRDG + C F+ D + + P++++ I
Sbjct: 313 FVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQRI--- 369
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
++ +++V Y E CR + L +F + P C CDNC H +E
Sbjct: 370 ARQQLRQVIDYAESTECRHRIQLRYF---------GEEFPGNCGTCDNCCHQRPME 416
>gi|170718152|ref|YP_001785180.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
gi|168826281|gb|ACA31652.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
Length = 624
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 159/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ IA+DE HC+SQWGHDFRP Y L L+ PD PI+A+TATA DI L L
Sbjct: 151 KVSFIAVDETHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADQATRQDILIHLKL 210
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+P+I FDRPN+ + K + +L+ F + +G IIYC ++ E++ +
Sbjct: 211 SNPHIYIGSFDRPNIRYSLVEK----FKPMEQLSQFIAKQKGKNGIIYCNSRNKVERIAE 266
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + GI YHA +S +QR+ + F D +++VVAT AFGMGI+K +VR V H+ P
Sbjct: 267 SLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQIVVATIAFGMGINKSNVRFVAHFDLP 326
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + AYYQE GRAGRD L + FY+ AD+ + ++ +P++ +I+ H ++ +
Sbjct: 327 RSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWLQKVLLEKPDIPQRQIELHK---LQSI 383
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ E + CRR LLN+F E Q P CD C
Sbjct: 384 GEFAESQICRRLVLLNYF-------GEYQQKPCNNCDIC 415
>gi|423066192|ref|ZP_17054982.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis C1]
gi|406712234|gb|EKD07423.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis C1]
Length = 739
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL R+ I + IDEAHCVS WGHDFRP YR + ++R P VP +A+TATAT V
Sbjct: 135 FLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTATATERVR 194
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI ++L+ P + F R NLY KQ +L GS IIYC ++
Sbjct: 195 FDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPK--KRFPQLLKVIESMSGSGIIYCSSR 252
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L N I PYHA ++ R E H F++D ++++VAT AFGMGIDKPDVR
Sbjct: 253 KRVEEVALQLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVR 312
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
VIHY PK L YYQE GRAGRDG + C F+ D + + P++++ I
Sbjct: 313 FVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQRI--- 369
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
++ +++V Y E CR + L +F + P C CDNC H +E
Sbjct: 370 ARQQLRQVIDYAESTECRHRIQLRYF---------GEEFPGNCGTCDNCCHQRPME 416
>gi|307132960|ref|YP_003884976.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
gi|306530489|gb|ADN00420.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
Length = 614
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 151/255 (59%), Gaps = 10/255 (3%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIAIDEAHC+SQWGHDFRP YR L +++ LP +PI+A+TATA DI L LRDP
Sbjct: 147 LIAIDEAHCISQWGHDFRPEYRALGQIKQQLPALPIVALTATADETTRQDIARLLDLRDP 206
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVLS 252
I + FDRPN+ K L +L F + Q S I+YC ++ E +C L
Sbjct: 207 LINISSFDRPNIRYTLVEK----FKPLDQLWLFVQGQRGKSGIVYCNSRAKVEDLCARLQ 262
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
G+ YHA + +R ++ F++D ++VVVAT AFGMGI+KP+VR V+H+ P+++
Sbjct: 263 NRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNI 322
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+YYQE GRAGRDGL + FY AD + + + +P +I+ H M +
Sbjct: 323 ESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGVQLDIERHKLNAMG---AF 379
Query: 371 LELRTCRRKYLLNHF 385
E +TCRR LLN+F
Sbjct: 380 AEAQTCRRLVLLNYF 394
>gi|167747470|ref|ZP_02419597.1| hypothetical protein ANACAC_02191 [Anaerostipes caccae DSM 14662]
gi|167652832|gb|EDR96961.1| ATP-dependent DNA helicase RecQ [Anaerostipes caccae DSM 14662]
Length = 616
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I +A+DEAHCVSQWG DFRPSY + LP P+L A TATAT V +D+ L L
Sbjct: 133 ISFLAVDEAHCVSQWGQDFRPSYLKILSFLEKLPRRPVLGAYTATATVEVKEDVLDILNL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
RDP ++ TGFDR NL+ +D L E + GS+ I+YC ++ E+VC
Sbjct: 193 RDPLVVTTGFDRANLFFGVKKPRDKYRELESYLREKEEKMPGSSGIVYCLSRKSVEEVCY 252
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L G YHA +S +R+E F+ D +++VAT AFGMGIDKPDVR VIHY P
Sbjct: 253 QLREAGFSVTRYHAGLSDTERRENQDDFIYDRRQIMVATNAFGMGIDKPDVRFVIHYNMP 312
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM------ 363
K++ +YYQE GRAGRDG + C ++ AD N + + ++ E+ E ++ +
Sbjct: 313 KNMESYYQEAGRAGRDGEPAECILYFGAADQRTNRFLIEHGEDNQELDEETRRIVMEKDL 372
Query: 364 --MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+K++ Y C R Y+L++F E + C NC
Sbjct: 373 GRLKQMTFYCATSGCLRHYILDYF-------GEESSAECRNCSNC 410
>gi|408675008|ref|YP_006874756.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387856632|gb|AFK04729.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 715
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 152/252 (60%), Gaps = 5/252 (1%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
IAIDE+HCVS WGHDFRP Y L L+ P+VP++A+TATA V DI L + +
Sbjct: 133 IAIDESHCVSTWGHDFRPEYIQLKALKDTFPNVPMVALTATADRVTRKDILNQLGIPEAL 192
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRN 254
I + FDRPNL L ++ + + NQ S IIYC ++ E V + L +
Sbjct: 193 IFISSFDRPNLNLRVLPGRNRLKVIHEFIAKRTNQ---SGIIYCLSRKNTEDVAEGLRKL 249
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI+ YHA + + R E+ ++KD I+V+VAT AFGMGIDK +VR VIHY P ++ +
Sbjct: 250 GIRAMHYHAGLDAQTRAEVQDAYIKDEIQVIVATIAFGMGIDKSNVRFVIHYSLPSNVES 309
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
+YQEIGRAGRDG+ S FY D T+ MI + L D E++E ++R+++Y E
Sbjct: 310 FYQEIGRAGRDGMKSDTLLFYSFGDIITRKEMIQKSELPD-EMKEVQLAKLERMKQYAES 368
Query: 374 RTCRRKYLLNHF 385
CRR+ L+++F
Sbjct: 369 EICRRRVLMSYF 380
>gi|409992245|ref|ZP_11275447.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis str. Paraca]
gi|409936909|gb|EKN78371.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis str. Paraca]
Length = 739
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL RI I + IDEAHCVS WGHDFRP YR + ++R P VP +A+TATAT V
Sbjct: 135 FLDRIDAELGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTATATERVR 194
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI ++L+ P + F R NLY KQ +L GS IIYC ++
Sbjct: 195 FDIIRQIVLKQPYVHVASFYRSNLYYQVIPKQPK--KRFTQLLKAIESMSGSGIIYCSSR 252
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L N I PYHA ++ R E H F++D ++++VAT AFGMGIDKPDVR
Sbjct: 253 KRVEEVALQLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVR 312
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
VIHY PK L YYQE GRAGRDG + C F+ D + + P++++ I
Sbjct: 313 FVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQRI--- 369
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
++ +++V Y E CR + L +F + P C CDNC H +E
Sbjct: 370 ARQQLRQVIDYAESTECRHRIQLRYF---------GEEFPGNCDGCDNCCHERPIE 416
>gi|291569161|dbj|BAI91433.1| ATP-dependent DNA helicase [Arthrospira platensis NIES-39]
Length = 739
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL RI I + IDEAHCVS WGHDFRP YR + ++R P VP +A+TATAT V
Sbjct: 135 FLDRIDAELGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTATATERVR 194
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI ++L+ P + F R NLY KQ +L GS IIYC ++
Sbjct: 195 FDIIRQIVLKQPYVHVASFYRSNLYYQVIPKQPK--KRFTQLLKAIESMSGSGIIYCSSR 252
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L N I PYHA ++ R E H F++D ++++VAT AFGMGIDKPDVR
Sbjct: 253 KRVEEVALQLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVR 312
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ--PNLNDSEIQEH 359
VIHY PK L YYQE GRAGRDG + C F+ D + + P++++ I
Sbjct: 313 FVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQRI--- 369
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLE 413
++ +++V Y E CR + L +F + P C CDNC H +E
Sbjct: 370 ARQQLRQVIDYAESTECRHRIQLRYF---------GEEFPGNCDGCDNCCHERPIE 416
>gi|442772186|gb|AGC72851.1| ATP-dependent DNA helicase RecQ [uncultured bacterium A1Q1_fos_97]
Length = 607
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 156/281 (55%), Gaps = 17/281 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I L AIDEAHC+S WGHDFRP Y + L+ P VP++A+TATA + DI L L
Sbjct: 132 KINLFAIDEAHCISAWGHDFRPEYTQMGMLKQHFPRVPVVALTATADKLTRKDIVDQLKL 191
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTKVICEKVCD 249
+P I FDRPNL L Q L+++ +F + + + IIY ++ E + D
Sbjct: 192 EEPGIFIASFDRPNLSLEVRPGQQR----LQQIEDFIRKHPKQAGIIYTLSRKATEDIAD 247
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + G + YHA +S +R +I F+ D + ++ AT AFGMGIDK +VR VIHY P
Sbjct: 248 KLKQKGFKAEAYHAGLSPDRRSKIQDHFINDNLHIICATVAFGMGIDKSNVRWVIHYNLP 307
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K+L YYQEIGRAGRDG + FY AD + I Q N ++ E ++R+++
Sbjct: 308 KNLEGYYQEIGRAGRDGAKADTLLFYSFADVSMLRDIIQNGENAAQ-NEIQLVKLERMQQ 366
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
Y E CRR+ LL +F S+ + C CD CR+
Sbjct: 367 YAESLACRRRILLAYF---------SENLSENCGNCDICRN 398
>gi|359406153|ref|ZP_09198865.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
gi|357556705|gb|EHJ38287.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
Length = 723
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 153/284 (53%), Gaps = 16/284 (5%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R +I AIDEAHC+S+WGHDFRP YR + + P++A+TATAT V DI S
Sbjct: 133 RSFKISFYAIDEAHCISEWGHDFRPEYRNIRPTINKIGAAPVIALTATATDKVRMDIKKS 192
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEK 246
L + D + F+R NLY K +DI +++ F Q G S IIYC ++ E+
Sbjct: 193 LGITDAKEFKSSFNRANLYYEVRQKTNDID---KQIIKFIKQHPGKSGIIYCISRKKVEE 249
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ VL N I+ YHA + R + F+ + I V+VAT AFGMGIDKPDVR VIHY
Sbjct: 250 LAAVLKANDIKAAAYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHY 309
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK L YYQE GRAGRDG +C FY D K F +E Q+ + +++
Sbjct: 310 DIPKSLEGYYQETGRAGRDGGEGICIAFYAYKDLQKLEK-FMEGKPVAE-QDIGRQLLQE 367
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
Y E CRRK LL++F G T + C CDNC H
Sbjct: 368 TAAYAETSVCRRKVLLHYF-GEEYT-------KENCGNCDNCLH 403
>gi|124002830|ref|ZP_01687682.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123992058|gb|EAY31445.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 149/268 (55%), Gaps = 5/268 (1%)
Query: 118 LPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATAT 177
L I FL R+ +I L AIDEAHC+S WGHDFRP Y L L+ P VP++A+TATA
Sbjct: 120 LSGTFIEFLQRL-QINLFAIDEAHCISSWGHDFRPEYAQLKMLKKVFPSVPVVALTATAD 178
Query: 178 PVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIY 237
+DI L L+ P FDR N+ L S Q+ I ++ L NQ S IIY
Sbjct: 179 KTTRNDILNQLNLQQPETFLASFDRENIRLHVSPGQNRIKKIIKYLETRPNQ---SGIIY 235
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C ++ E++ L G YHA + +R + F+KD ++ AT AFGMGIDK
Sbjct: 236 CLSRKSTEQIAQKLKDAGFSADYYHAKMDSNRRAAVQQSFLKDDTHIICATIAFGMGIDK 295
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
P+VR VIHY PK++ YYQEIGRAGRDGL S FY D K F N+++ +
Sbjct: 296 PNVRFVIHYNMPKNVEGYYQEIGRAGRDGLKSDAILFYSYGD-VKILREFIHNIDNEGFK 354
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHF 385
++R+ ++ + CRR+ LLN+F
Sbjct: 355 ALQFAKLERMLQFADADICRRRILLNYF 382
>gi|423459146|ref|ZP_17435943.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG5X2-1]
gi|401144224|gb|EJQ51754.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG5X2-1]
Length = 705
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 168/300 (56%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDTDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C+NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCENCTDDR--ESIDVTRESQMVL 413
>gi|422021069|ref|ZP_16367583.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
gi|414099974|gb|EKT61607.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
Length = 608
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 163/287 (56%), Gaps = 19/287 (6%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLS + + L A+DEAHC+SQWGHDFRP YR + +LR PDVP++A+TATA
Sbjct: 131 FLSHLSNWNVALFAVDEAHCISQWGHDFRPEYRGMGQLRQHFPDVPVMALTATADETTRA 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTK 241
DI L L+DP I + FDRPN+ K L +L F +G + I+YC ++
Sbjct: 191 DIIRRLDLQDPLIQISSFDRPNIRYTLVEK----YKPLDQLWFFIKAQKGKAGIVYCNSR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+ + L + G+ YHA + +QR+ + F+KD I++VVAT AFGMGI+K +VR
Sbjct: 247 NKVEETAERLKKRGLTVEAYHAGLDNQQREWVQDAFLKDNIQIVVATVAFGMGINKSNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEH 359
V H+ P+++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H
Sbjct: 307 FVAHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMHQDIERH 366
Query: 360 SKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 367 K---LNAIAAFAEAQTCRRLVLLNYF-------GENRQTPCGNCDIC 403
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 201 bits (510), Expect = 8e-49, Method: Composition-based stats.
Identities = 121/299 (40%), Positives = 167/299 (55%), Gaps = 29/299 (9%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R R+ AIDEAHCVSQWG+DFRP YR L LR P+VP++A+TATAT V+ D+
Sbjct: 787 LNREGRLDRFAIDEAHCVSQWGNDFRPDYRQLQSLREEYPNVPLVALTATATKAVLQDVI 846
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVK-QDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
L +++P + FDRPNL K I+ D+ T + +F+G S I+YC ++
Sbjct: 847 AQLRMQEPVVFQGSFDRPNLRYEVRPKVTKRIIEDIA--TTIKTEFDGLSGIVYCLSRRE 904
Query: 244 CEKVCDVLSRNG-IQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
CE+V + L ++ I YHA + ++R+EI ++ D IKV+VAT AFGMGI+K DVR
Sbjct: 905 CERVAEGLQKHARISAGFYHAQLDPEKREEIQRDWMNDDIKVIVATLAFGMGINKRDVRF 964
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND--SEIQEHS 360
VIH PK L +YQE GRAGR+G + C FY D + + + Q N D S + H
Sbjct: 965 VIHCAMPKCLENFYQESGRAGRNGDEASCILFYNYHDKQRQSHLIQLNSADGPSGCRRHD 1024
Query: 361 KTMMKRVEKYL--------ELRTCRRKYLLNH----FKGSSVTVAESQVPPDKCCDNCR 407
R E+ L E CRR+++L H F+G+ CDNCR
Sbjct: 1025 DGQASRNEENLLPMLAYCEEEDECRRRFILRHFGEDFRGTCAVA----------CDNCR 1073
>gi|86143313|ref|ZP_01061715.1| ATP-dependent DNA helicase recQ [Leeuwenhoekiella blandensis
MED217]
gi|85830218|gb|EAQ48678.1| ATP-dependent DNA helicase recQ [Leeuwenhoekiella blandensis
MED217]
Length = 704
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 148/254 (58%), Gaps = 13/254 (5%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
IAIDEAHC+S WGHDFRPSY+ L L+ LP +P++A+TATA +DI L +
Sbjct: 138 IAIDEAHCISSWGHDFRPSYQQLGFLKKSLPQIPMIALTATADKATREDIANQLNISHAK 197
Query: 195 IINTGFDRPNLYL---AASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ FDR N+ L AA + D I L E + + S IIYC ++ E V L
Sbjct: 198 QFISSFDRKNITLEVRAADKRLDQIKRFL------EKRPDTSGIIYCLSRKTTESVSTSL 251
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ GI+ YHA +S +R ++ F+ D +VV AT AFGMGIDK +VR VIHY PK+
Sbjct: 252 AAEGIKATCYHAGLSFDERNKVQEDFIYDKTQVVCATVAFGMGIDKSNVRWVIHYNMPKN 311
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQEIGRAGRDGL S F+ AD + Q N+ E+Q + R+++Y
Sbjct: 312 LEGYYQEIGRAGRDGLKSHALLFHSYADVLQLRRFTQGAGNE-EVQ---NAKLDRMKQYA 367
Query: 372 ELRTCRRKYLLNHF 385
E TCRRK LL++F
Sbjct: 368 EATTCRRKILLSYF 381
>gi|422019090|ref|ZP_16365640.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
gi|414103632|gb|EKT65206.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
Length = 608
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 158/278 (56%), Gaps = 17/278 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+A+DEAHC+SQWGHDFRP YR L +LR LP+VP++A+TATA DI L L
Sbjct: 140 IALLAVDEAHCISQWGHDFRPEYRSLGQLRRALPNVPVMALTATADETTRADIVRLLELN 199
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
DP I + FDRPN+ K L +L F +G S I+YC ++ E+ +
Sbjct: 200 DPLIHVSSFDRPNIRYTLVEK----YKPLDQLWFFIKAQKGKSGIVYCNSRSKVEETAER 255
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ YHA + QR+ + F KD +++VVAT AFGMGI+K +VR V H+ P+
Sbjct: 256 LQKRGLSVAAYHAGLENAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHFDIPR 315
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H + +
Sbjct: 316 NIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERHK---LNAIA 372
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F E++ P CD C
Sbjct: 373 AFAEAQTCRRLVLLNYF-------GENRQKPCGNCDIC 403
>gi|294673710|ref|YP_003574326.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473219|gb|ADE82608.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 607
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 155/278 (55%), Gaps = 18/278 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I L AIDEAHC+S WGHDFRP Y L LR P+VP++A+TATA + DI T L L
Sbjct: 128 QISLFAIDEAHCISHWGHDFRPEYTQLGVLREKFPNVPMMALTATADKITRQDILTQLKL 187
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMAD-LRKLTNF-ENQFEGSTIIYCPTKVICEKVC 248
R+ + FDRPNL L SVK+ A+ + + NF + + + IIYC ++ EKV
Sbjct: 188 RNAREFVSSFDRPNLSL--SVKRGYKSAEKMHFILNFIKARPNDAGIIYCLSRKTTEKVA 245
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + GI YHA +S +R + F D + VV AT AFGMGIDK +VR VIHY
Sbjct: 246 ADLRKKGINAAAYHAGLSSLERSQTQEQFKNDQLLVVCATIAFGMGIDKSNVRWVIHYNM 305
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK + ++YQEIGRAGRDG + FY AD + S Q+ + +KR++
Sbjct: 306 PKSIESFYQEIGRAGRDGAPADTVLFYSLADIIQ----LTEFARQSGQQDVNMDKLKRMQ 361
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+Y E CRR+ LLN+F + D C NC
Sbjct: 362 EYAESNVCRRRILLNYFSEQT----------DHDCGNC 389
>gi|282600067|ref|ZP_05972875.2| ATP-dependent DNA helicase RecQ [Providencia rustigianii DSM 4541]
gi|282566927|gb|EFB72462.1| ATP-dependent DNA helicase RecQ [Providencia rustigianii DSM 4541]
Length = 603
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 158/278 (56%), Gaps = 17/278 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+A+DEAHC+SQWGHDFRP YR L +LR LP+VP++A+TATA DI L L
Sbjct: 135 ITLLAVDEAHCISQWGHDFRPEYRALGQLRRTLPNVPVMALTATADEATRTDIIRLLELN 194
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDV 250
DP + + FDRPN+ K L +L F + Q S I+YC ++ E+ +
Sbjct: 195 DPLVHVSSFDRPNIRYTLVEK----YKPLDQLWFFIKGQKGKSGIVYCNSRTKVEETAER 250
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ YHA + QR+ + F KD +++VVAT AFGMGI+K +VR V H+ P+
Sbjct: 251 LQKRGLSVAAYHAGLDNAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHFDIPR 310
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H + +
Sbjct: 311 NIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERHK---LNAIA 367
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F E++ P CD C
Sbjct: 368 AFAEAQTCRRLVLLNYF-------GENRQQPCGNCDIC 398
>gi|212710158|ref|ZP_03318286.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
gi|212687157|gb|EEB46685.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
Length = 608
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 158/278 (56%), Gaps = 17/278 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L+A+DEAHC+SQWGHDFRP YR L +LR LP+VP++A+TATA DI L L
Sbjct: 140 IALLAVDEAHCISQWGHDFRPEYRSLGQLRRALPNVPVMALTATADETTRADIVRLLELN 199
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
DP I + FDRPN+ K L +L F +G S I+YC ++ E+ +
Sbjct: 200 DPLIHVSSFDRPNIRYTLVEK----YKPLDQLWFFIKAQKGKSGIVYCNSRSKVEETAER 255
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ YHA + QR+ + F KD +++VVAT AFGMGI+K +VR V H+ P+
Sbjct: 256 LQKRGLSVAAYHAGLENAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHFDIPR 315
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
++ AYYQE GRAGRDG+ + FY AD + + + +P +I+ H + +
Sbjct: 316 NIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERHK---LNAIA 372
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F E++ P CD C
Sbjct: 373 AFAEAQTCRRLVLLNYF-------GENRQKPCGNCDIC 403
>gi|423407543|ref|ZP_17384692.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG2X1-3]
gi|401658869|gb|EJS76358.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG2X1-3]
Length = 705
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 165/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPKKPLVLALTATATPQVRDDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVVKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L R G+ YHA +S R E LF++D + V++AT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGRAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMIATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKQDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|167622376|ref|YP_001672670.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
gi|167352398|gb|ABZ75011.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
Length = 607
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 154/276 (55%), Gaps = 17/276 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA DIC L +
Sbjct: 140 VSLFAIDEAHCISQWGHDFRPEYAALGRLRQQFPQVPIMALTATADKATRADICERLTI- 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P+ + T FDRPN+ + K + LR+ + +N G I+YC ++ ++V + L
Sbjct: 199 TPHSLLTSFDRPNIRYTVAEKLN-AANQLRQFVDAQNGTSG--IVYCSSRRRVDEVAERL 255
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G Q YHA + ++R ++ F+KD + +VVAT AFGMGI+K +VR V+HY PK
Sbjct: 256 RLQGHQAEAYHAGKTQEERADVQDRFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKS 315
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ AYYQE GRAGRDGL S + AD + ++I Q + E K + + +
Sbjct: 316 VEAYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHK--LNTMAAF 373
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +TCRR+ LL++F P K C NC
Sbjct: 374 AEAQTCRRQVLLHYFD----------EPALKACGNC 399
>gi|443243562|ref|YP_007376787.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442800961|gb|AGC76766.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 720
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 154/260 (59%), Gaps = 8/260 (3%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L IP + LIA+DEAHC+S WGHDFRP+Y LS + P+ ++A+TATA DI
Sbjct: 123 LQGIP-VSLIAVDEAHCISTWGHDFRPAYTQLSYFKTSFPEANLIALTATADRATRADIK 181
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L +++ FDRPNL L + + R L +++ S IIYC ++ CE
Sbjct: 182 KQLGIQNAQEYVASFDRPNLTLEVRPGNNRLQQMRRFLKKNKDE---SGIIYCLSRKTCE 238
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ L+ G YHA +S ++R+ + +F+KD +K+V AT AFGMGIDK +VR VIH
Sbjct: 239 SIASKLTAYGFDAAAYHAGLSHEERENVQEIFIKDDLKIVCATIAFGMGIDKSNVRFVIH 298
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMK 365
Y PK++ YYQEIGRAGRDGL+S F+ AD + F ++E+Q ++
Sbjct: 299 YNMPKNIEGYYQEIGRAGRDGLNSHALLFHSYADVIQLRK-FADGSGNAEVQ---IAKLE 354
Query: 366 RVEKYLELRTCRRKYLLNHF 385
R++++ E TCRRK LL++F
Sbjct: 355 RMKQFAEALTCRRKMLLSYF 374
>gi|298715824|emb|CBJ28289.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 559
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 154/279 (55%), Gaps = 43/279 (15%)
Query: 130 PRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLM 189
P + LIA+DE+HCV++WGHDFRPSY L LR P VP++A+TATATP V +I T+L
Sbjct: 81 PGLALIAVDESHCVAEWGHDFRPSYLELRSLRDKFPQVPLMALTATATPRVQSEIMTNLG 140
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
LR+P + T F+R NL+ SVK ++ + L + EGS IIY TK E++
Sbjct: 141 LRNPLVAKTSFNRWNLHY--SVKTVNVQSRHEALCSLLRGLEGSAIIYVMTKRDAEQLTG 198
Query: 250 VLSR--NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++R R YH +S R+E+H F++D ++VV+AT AFGMGIDKPDVR VIH G
Sbjct: 199 DVARIVGSKGARTYHGGMSPADRREVHHAFIRDDVQVVIATIAFGMGIDKPDVRVVIHCG 258
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK + AYYQ+ GRAGRDGL + NN ++ +
Sbjct: 259 LPKTVEAYYQQTGRAGRDGLPA-------------NN-----------------KLLAEI 288
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
EK+ CRR+ +L +F + D CD C
Sbjct: 289 EKFSTSLGCRRRAILAYF---------GEDMGDSKCDGC 318
>gi|291546967|emb|CBL20075.1| ATP-dependent DNA helicase, RecQ-like [Ruminococcus sp. SR1/5]
Length = 609
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 154/264 (58%), Gaps = 14/264 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I +IA+DE+HCVSQWG DFRPSY ++E LP P++ A TATAT V +DI L L
Sbjct: 130 ISMIAVDESHCVSQWGQDFRPSYLKIAEFVAQLPKRPVIGAFTATATKEVREDIARLLGL 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQF-EGSTIIYCPTKVICEKVCD 249
+DP TGFDR NLY A +D +++ ++ + + S IIYC T+ + E+VC
Sbjct: 190 QDPFCTTTGFDRENLYFAVKTPKDK----YKEVHDYILEHPDDSGIIYCLTRKLVEEVCG 245
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L R+GI YHA +S ++R+ F+ D +V+VAT AFGMGIDK DVR VIHY P
Sbjct: 246 KLIRDGITATRYHAGLSDEERRNNQDDFIYDRCRVMVATNAFGMGIDKSDVRYVIHYNMP 305
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQEHSK 361
K++ YYQE GRAGRDG + C Y D N + + ++ E ++E +
Sbjct: 306 KNMEGYYQEAGRAGRDGDPAECILLYSGKDVVTNQYLIERGQDNQEMEAAAWRLVRERDQ 365
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+K++ Y C R+Y+L +F
Sbjct: 366 ERLKQMTFYCFTHDCLREYILKYF 389
>gi|402832959|ref|ZP_10881582.1| ATP-dependent DNA helicase RecQ [Selenomonas sp. CM52]
gi|402281702|gb|EJU30328.1| ATP-dependent DNA helicase RecQ [Selenomonas sp. CM52]
Length = 593
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 150/278 (53%), Gaps = 17/278 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
+ IAIDEAHC+SQWGHDFRPSYR ++ LP P++ A TATATP V DDI + L L
Sbjct: 136 VSFIAIDEAHCLSQWGHDFRPSYRAIAPFIERLPKRPLIGAFTATATPRVKDDIISLLAL 195
Query: 191 RDPNIINTGFDRPNLYLA--ASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVC 248
R P + GFDRPNL+ V + D +A+ E + IIYC T+ + V
Sbjct: 196 RRPAVHVAGFDRPNLFFGVLTGVDRKDFIANY-----LRTHREEAGIIYCATRKETDAVS 250
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L + RPYHA + ++R + F+ D ++ +VAT AFGMGIDK +VR VIHY
Sbjct: 251 RFLQQKKFAVRPYHAGLIDEERSKAQDDFLYDNVQAIVATNAFGMGIDKSNVRFVIHYNM 310
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK++ +YYQE GRAGRDG C + D + + D+ + H ++++
Sbjct: 311 PKNIESYYQEAGRAGRDGEPGECILLFSPQDVMTQKYLIDVSTEDAAHKAHELGCLQKMS 370
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
Y C R ++L +F S+ P CD+C
Sbjct: 371 DYCHTPDCLRAFILRYFGESA---------PAASCDHC 399
>gi|253690325|ref|YP_003019515.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756903|gb|ACT14979.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 608
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 166/295 (56%), Gaps = 22/295 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHC+SQWGHDFRP YR L +++ P +P +A+TATA +DI L L
Sbjct: 139 QIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRNDIVRLLDL 198
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
+ P I FDRPN+ K L +L F + Q S IIYC ++ E +C
Sbjct: 199 QSPLIQINSFDRPNIRYTLVEK----FKPLDQLWMFVQGQRGKSGIIYCNSRSRVEDICA 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L G+ YHA + ++R ++ F++D ++VVVAT AFGMGI+KP+VR V+H+ P
Sbjct: 255 RLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
+++ +YYQE GRAGRDGL++ FY AD + + + +P +I+ H M
Sbjct: 315 RNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQLDIERHKLNAMG-- 372
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLELEQV 417
+ E +TCRR LLN+F E + P CD C R++ ++E ++
Sbjct: 373 -AFAEAQTCRRLVLLNYF-------GEGRQQPCGNCDVCLDPPKRYDGLVEAQKA 419
>gi|37528437|ref|NP_931782.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787875|emb|CAE16992.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 608
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 158/278 (56%), Gaps = 19/278 (6%)
Query: 133 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
++A+DEAHC+SQWGHDFRP YR L +LR P +P++A+TATA +DI L L +
Sbjct: 141 AMLAVDEAHCISQWGHDFRPEYRALGQLRQRFPTLPVIALTATADETTRNDIVRLLNLNN 200
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVL 251
P I + FDRPN+ K L +L F Q S I+YC ++ E++ + L
Sbjct: 201 PLIHISSFDRPNIRYTLIEK----YKPLDQLWLFIRGQKGKSGIVYCNSRSRVEEISERL 256
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ G+ PYHA + QR + F +D ++VVVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 257 QKRGLSVAPYHAGLDNSQRARVQDAFQRDDLQVVVATVAFGMGINKPNVRFVVHFNIPRN 316
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI---QEHSKTMMKRVE 368
+ +YYQE GRAGRDGL + FY AD + + L + E+ Q+ + + +
Sbjct: 317 IESYYQETGRAGRDGLPAEAVLFYDPADM----VWLRRCLEEKEVGTQQDIERHKLNAMG 372
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR LLN+F ES+ P CD C
Sbjct: 373 AFAEAQTCRRLVLLNYF-------GESKQTPCGNCDIC 403
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 7/279 (2%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVSQWGHDFRP Y+ L ++ P VP+LA+TATAT +V D+ ++L ++
Sbjct: 993 LARIVIDEAHCVSQWGHDFRPDYKALGDVVRQFPGVPVLALTATATKLVRSDVVSNLGIQ 1052
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ F+RPNL K I+ ++ L E S IIYC ++ CE+V L
Sbjct: 1053 GCREFSQSFNRPNLSYEVLPKAKGIINNIADLIK-ERYVGKSGIIYCLSRKSCEQVAQKL 1111
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
S GI+ YHA + R ++ + K+ V+VAT AFGMGIDK DVR VIH+ PK
Sbjct: 1112 SEMGIRAYHYHAGMDSADRSDVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKS 1171
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
L YYQE GRAGRDG S CY +Y+ AD + E ++ M++ V +Y
Sbjct: 1172 LEGYYQETGRAGRDGKRSECYLYYQYADSRILRKMIDEGEGSREQKQRLSDMLRTVIQYC 1231
Query: 372 ELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
E + CRR +L +F S S+ + CDNCR +
Sbjct: 1232 ENKADCRRAQVLGYF---SEAFDASKC--NSTCDNCRSD 1265
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 158/290 (54%), Gaps = 17/290 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ + IDEAHCVSQWGHDFRP Y+ L + R P+VP++A+TATAT VI DI +L +
Sbjct: 944 KFARLVIDEAHCVSQWGHDFRPDYKALGQARKKFPNVPVMALTATATQNVIVDIRHNLGM 1003
Query: 191 RDPNIINTGFDRPNLYL-----AASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVIC 244
+ + F+RPNL+ + + +ADL + + G T I+Y ++
Sbjct: 1004 HTCKVFSQSFNRPNLFYEVRPKGTAASSIETIADL-----IHSHYAGLTGIVYALSRKGT 1058
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E V L GI YHA ++ ++ + + K +KVVVAT AFGMGIDKPDVR VI
Sbjct: 1059 ENVAKKLGEAGISAYHYHAGMTPPEKVSVQKKWQKGDVKVVVATIAFGMGIDKPDVRFVI 1118
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+G PK L YYQE GRAGRDG S C Y D T + + + ++ M+
Sbjct: 1119 HHGLPKSLEGYYQETGRAGRDGKPSDCILLYGKRDITVLKKMITDGEGNQQQKDRQMEML 1178
Query: 365 KRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
RV + + + CRR +L +F G + A+ Q K CDNC+ ++ E
Sbjct: 1179 NRVASFCDNQWDCRRTEVLRYF-GEDFSAAQCQ----KNCDNCQSGKVFE 1223
>gi|149184972|ref|ZP_01863289.1| DNA helicase [Erythrobacter sp. SD-21]
gi|148831083|gb|EDL49517.1| DNA helicase [Erythrobacter sp. SD-21]
Length = 591
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL+ P I L A+DEAHCVS+WGHDFRP YR L L PDVP LA+TATA D+
Sbjct: 127 FLAFSP-IALFAVDEAHCVSEWGHDFRPDYRMLRPLMDAFPDVPRLALTATADRQTRGDV 185
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
L + + ++ GFDRPN+ A + + + R++ N + G I+Y T+
Sbjct: 186 LAQLGIPEEGLVLAGFDRPNIRYAIRHRDNPV----RQIANLMAERPGPGIVYAQTRRKV 241
Query: 245 EKVCDVLSR-NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + + L+R G PYHA + + R FV V+VAT AFGMGIDKPDVR V
Sbjct: 242 EDLAEKLARETGRTVLPYHAGLDPETRAANQAAFVASEDMVIVATVAFGMGIDKPDVRFV 301
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
H G PK + AYYQE GRAGRDG S F+ DF D E ++
Sbjct: 302 AHVGVPKSIEAYYQETGRAGRDGDPSAATMFWGAGDFATARARLAEVDGDRRGAERAR-- 359
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ + +E CRR LL HF + PP+ C CDNC
Sbjct: 360 LDALAGLVETPQCRRAVLLRHF---------GEDPPETCGNCDNC 395
>gi|30690466|ref|NP_849500.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|332661157|gb|AEE86557.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 620
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 153/278 (55%), Gaps = 10/278 (3%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIAIDEAHC+S WGHDFRPSYR LS LR L DVP+LA+TATA P V D+ SL LR+P
Sbjct: 66 LIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNP 125
Query: 194 NIINTGFDRPNLYLAASVKQ--DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
++ + F+RPN++ K D+ DL L IIYC + C+ + L
Sbjct: 126 LVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNI--CAIIYCLERTTCDDLSVHL 183
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
S GI + YHA ++ K R + ++ +++VAT AFGMGIDK DVR V H+ PK
Sbjct: 184 SSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKS 243
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM-MKRVEKY 370
+ ++YQE GRAGRD L S +Y D K + + + N T +++ Y
Sbjct: 244 MESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTSDFEQIVTY 303
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
E CRRK +L F G V + + K CD C+H
Sbjct: 304 CEGSGCRRKKILESF-GEEFPVQQCK----KTCDACKH 336
>gi|229060489|ref|ZP_04197852.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH603]
gi|228718872|gb|EEL70493.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH603]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|418696685|ref|ZP_13257690.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
H1]
gi|421109549|ref|ZP_15570066.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
H2]
gi|409955478|gb|EKO14414.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
H1]
gi|410005380|gb|EKO59174.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri str.
H2]
Length = 621
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 18/282 (6%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLMLRDP 193
IA+DEAHCVSQWGHDFRP YR L ELR P +P++A+TATAT VI DI SL L++P
Sbjct: 143 IAVDEAHCVSQWGHDFRPEYRKLYELRDKYPKPIPVVALTATATSRVIKDISDSLGLKNP 202
Query: 194 NIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+I F R NL + Q++I + L KL NF+ G I+YC T+ E V
Sbjct: 203 ILIKGSFYRENLRFSVRFPQNEISRENELLKLLVKGNFQKVSSGRVIVYCATRQKVETVY 262
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L +NG + YHA + R++ + ++VAT AFGMG+D+P+VR VIHY
Sbjct: 263 GFLKKNGFKVGKYHAGRTDSSREKTQDGYNNGKTNILVATNAFGMGLDQPNVRLVIHYQI 322
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
P L +YYQE GRAGRDG S C FY +D I N ++ +T++ ++
Sbjct: 323 PASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----RKGGETLLSHLK 378
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+Y CR++ L ++F + ++ P K CD C E
Sbjct: 379 EYSISNKCRQQTLCSYF--------DEEILPCKTCDICLEKE 412
>gi|270157372|ref|ZP_06186029.1| ATP-dependent DNA helicase RecQ [Legionella longbeachae D-4968]
gi|289164234|ref|YP_003454372.1| ATP-dependent DNA helicase [Legionella longbeachae NSW150]
gi|269989397|gb|EEZ95651.1| ATP-dependent DNA helicase RecQ [Legionella longbeachae D-4968]
gi|288857407|emb|CBJ11235.1| ATP-dependent DNA helicase [Legionella longbeachae NSW150]
Length = 604
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 157/291 (53%), Gaps = 20/291 (6%)
Query: 121 VPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
+ I FL R+ I L AIDEAHC+SQWGHDFRP Y L L+ P VPI+A+TATA
Sbjct: 126 INISFLDRLKECNIALFAIDEAHCISQWGHDFRPEYAALGVLKTHFPAVPIVALTATADR 185
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYC 238
DI L PN F+RPN++ K + + L++ E Q S IIYC
Sbjct: 186 QTRQDIVAKLNYI-PNKYIASFNRPNIHYKVVPKTHALKQLNQFLSSVEQQ---SGIIYC 241
Query: 239 PTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKP 298
T+ E + L + G + R YHA +S +RKE+ LF D I +VVAT AFGMGIDKP
Sbjct: 242 GTRNSVENTVEKLQKMGFKARAYHAGLSHAERKEVQTLFRYDRIDIVVATIAFGMGIDKP 301
Query: 299 DVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQ 357
+VR V+HY PK++ AYYQE GRAGRDGL + Y AD + + I L +
Sbjct: 302 NVRYVVHYDLPKNIEAYYQETGRAGRDGLPAQALLLYDAADSARLRSWIVNSPLEEQRFV 361
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
E +K + + + E CRR+ LL +F S T KC CD C
Sbjct: 362 ETNK--LNHMLAFAEASHCRRQILLRYFDESFET---------KCDYCDVC 401
>gi|400595361|gb|EJP63166.1| RecQ family ATP-dependent DNA helicase [Beauveria bassiana ARSEF
2860]
Length = 1678
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 162/298 (54%), Gaps = 7/298 (2%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+ + IDEAHCVSQWGHDFRP Y+ L + R P+VP++A+TATAT VI DI +L +
Sbjct: 933 KFARLVIDEAHCVSQWGHDFRPDYKNLGQARRKFPNVPVMALTATATQNVILDIRHNLGM 992
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
I + F+RPNLY K + A +++ G T I+Y ++ EK+ +
Sbjct: 993 NTCKIFSQSFNRPNLYYEVRSKGSPVSAVETIAELIHSKYAGLTGIVYALSRAGTEKLAE 1052
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + I + YHA ++ + + + + +KVVVAT AFGMGIDKPDVR VIH+G P
Sbjct: 1053 KLRKQRISAQHYHAGMTAPDKVSVQTRWQQGAVKVVVATIAFGMGIDKPDVRFVIHHGLP 1112
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L YYQE GRAGRDG S C Y D + ++E +E M+ +V
Sbjct: 1113 KSLEGYYQETGRAGRDGKPSDCILLYARRDIAVLRKMITDGEGNAEQKERQMQMLNQVAA 1172
Query: 370 YLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
+ + CRR +L +F G + A+ + K CDNC+ ++ E + + R ++
Sbjct: 1173 FCDNEWDCRRTEVLRYF-GEEFSAAQCR----KNCDNCQSGKVFEQKDLSDCARSAIQ 1225
>gi|366993190|ref|XP_003676360.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
gi|342302226|emb|CCC69999.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
Length = 1344
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 10/282 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PDVP++A+TATA+ V DI +L L
Sbjct: 709 KLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPDVPMIALTATASEQVRMDIIHNLEL 768
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCD 249
+DP + F+R NLY K + + ++ + + + +F T IIYC +K CE+ D
Sbjct: 769 KDPVFLKQSFNRTNLYYEVKKKTKNAIFEI--IDSIKTKFRNQTGIIYCHSKNSCEQTSD 826
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L R GI+ YHA + R ++ + D I+V+ AT AFGMGIDKPDVR V H+ P
Sbjct: 827 KLQRQGIKCAFYHAGMEPDDRLKVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVP 886
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRVE 368
+ L YYQE GRAGRDG S C T++ D + Q + N D + +E +++V
Sbjct: 887 RTLEGYYQETGRAGRDGKFSYCITYFSFRDVRTMQTMIQKDENLDRQNKEKHLNKLQQVM 946
Query: 369 KYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
Y + + CRRK +L++F +S++ K CDNC+++
Sbjct: 947 SYCDNMTDCRRKLVLSYFNED----FDSKL-CHKNCDNCKNS 983
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
Length = 1394
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 166/298 (55%), Gaps = 14/298 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
I L R ++ I +DEAHCVS WGHDFRP Y+ L + P++P++A+TATA+ V
Sbjct: 745 IQKLYRDHKLSRIVVDEAHCVSNWGHDFRPDYKELKFFKEEYPNIPMMALTATASEQVRM 804
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTK 241
DI +L LR P + F+R NLY K + M ++ + +F G T I+YC +K
Sbjct: 805 DIIHNLQLRQPVFLKQSFNRTNLYYQVLRKSKNSMDEI--CETIKTKFRGQTGIVYCHSK 862
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE+ + R+G++ YHA + +R ++ + + ++V+ AT AFGMGIDKPDVR
Sbjct: 863 NSCEQTAATMVRSGVKCAYYHAGMDPDERLQVQQGWQSNKVQVICATVAFGMGIDKPDVR 922
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHS 360
V H+ P+ L YYQE GRAGRDG S C +Y D + Q + N D E +E
Sbjct: 923 FVYHFTVPRTLEGYYQETGRAGRDGSYSHCIMYYSFRDVRTIQSMIQKDKNLDRENKEKH 982
Query: 361 KTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCRHNEMLELE 415
+++V +Y E T CRR+ +L++F ES D K CDNCR+ +E E
Sbjct: 983 LNKLQQVMQYCENTTDCRRQLVLSYFN-------ESFNSSDCTKNCDNCRNGHNIEYE 1033
>gi|30690461|ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|75334307|sp|Q9FT72.1|RQL3_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName:
Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3
gi|11121447|emb|CAC14867.1| DNA Helicase [Arabidopsis thaliana]
gi|332661156|gb|AEE86556.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 713
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 153/278 (55%), Gaps = 10/278 (3%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIAIDEAHC+S WGHDFRPSYR LS LR L DVP+LA+TATA P V D+ SL LR+P
Sbjct: 159 LIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNP 218
Query: 194 NIINTGFDRPNLYLAASVKQ--DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
++ + F+RPN++ K D+ DL L IIYC + C+ + L
Sbjct: 219 LVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNI--CAIIYCLERTTCDDLSVHL 276
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
S GI + YHA ++ K R + ++ +++VAT AFGMGIDK DVR V H+ PK
Sbjct: 277 SSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKS 336
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM-MKRVEKY 370
+ ++YQE GRAGRD L S +Y D K + + + N T +++ Y
Sbjct: 337 MESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTSDFEQIVTY 396
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
E CRRK +L F G V + + K CD C+H
Sbjct: 397 CEGSGCRRKKILESF-GEEFPVQQCK----KTCDACKH 429
>gi|409202724|ref|ZP_11230927.1| ATP-dependent DNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 607
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 168/310 (54%), Gaps = 22/310 (7%)
Query: 105 RPSYRCLSELRLPL----PDVPIL--FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRC 156
R +Y L + RL L P+ + F+ RI I L AIDEAHCVS WGHDFRP Y
Sbjct: 107 RDTYDALFQGRLKLLYVAPEKALQRDFIERISNCNISLFAIDEAHCVSHWGHDFRPHYFR 166
Query: 157 LSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDI 216
L ELR P VP++A+TATA DI L ++ P I FDRPN+ K +
Sbjct: 167 LKELRQHFPSVPMMALTATADLATRKDIVQQLGMQAPFIYTGSFDRPNIRYTIEEKFKPL 226
Query: 217 MADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGL 276
+R L + Q S IIYC ++ + + + L G YHA + QR+ +
Sbjct: 227 SQLIRYLKEQKGQ---SGIIYCGSRKRVDDIAEKLIDAGFNAAGYHAGLDNDQRQFVQNR 283
Query: 277 FVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYK 336
F +D I++VVAT AFGMGI+KP+VR V+HY PK + AYYQE GRAGRD L++ ++
Sbjct: 284 FARDDIQIVVATVAFGMGINKPNVRFVVHYDIPKSVEAYYQETGRAGRDSLAAEAVMYFD 343
Query: 337 TADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQ 396
AD + F+ ++ D + ++ + + + + E +TCRR+ LLN+F +E Q
Sbjct: 344 PADIPRVRRFFE-DIPDEQRRKVEEQRFQAMSSFAEAQTCRRQILLNYF-------SEYQ 395
Query: 397 VPPDKCCDNC 406
+ C NC
Sbjct: 396 ---REACGNC 402
>gi|228908560|ref|ZP_04072400.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis IBL 200]
gi|228851113|gb|EEM95927.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis IBL 200]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|75762555|ref|ZP_00742410.1| ATP-dependent DNA helicase recQ [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218897840|ref|YP_002446251.1| ATP-dependent DNA helicase RecQ [Bacillus cereus G9842]
gi|228901356|ref|ZP_04065548.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis IBL 4222]
gi|423562776|ref|ZP_17539052.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MSX-A1]
gi|434375793|ref|YP_006610437.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis HD-789]
gi|74489957|gb|EAO53318.1| ATP-dependent DNA helicase recQ [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218543132|gb|ACK95526.1| ATP-dependent DNA helicase RecQ [Bacillus cereus G9842]
gi|228858280|gb|EEN02748.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis IBL 4222]
gi|401199914|gb|EJR06807.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MSX-A1]
gi|401874350|gb|AFQ26517.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis HD-789]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|434399695|ref|YP_007133699.1| ATP-dependent DNA helicase RecQ [Stanieria cyanosphaera PCC 7437]
gi|428270792|gb|AFZ36733.1| ATP-dependent DNA helicase RecQ [Stanieria cyanosphaera PCC 7437]
Length = 708
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 162/285 (56%), Gaps = 14/285 (4%)
Query: 125 FLSRIPR---IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVI 181
FL +I I IAIDEAHC+S+WGHDFRP YR L + R P VP+LA+TATAT V
Sbjct: 125 FLDKIANNIGISTIAIDEAHCISEWGHDFRPEYRQLKQFRQRYPQVPLLALTATATKRVQ 184
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DI L L++P++ F+R N++ KQ L L +Q G+ I+YC ++
Sbjct: 185 QDIIEQLGLQNPSVHLNSFNRFNIHYQVQPKQQRSYHQL--LQEIRSQ-SGAGIVYCLSR 241
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L ++GI+ PYHA ++ ++R F++D ++V+VAT AFGMGI+KPDVR
Sbjct: 242 RNVEEVAYKLQKDGIKALPYHAGMTDEKRTINQTRFLRDDVQVMVATIAFGMGINKPDVR 301
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V HY P+ L +YQE GRAGRDG S+ F+ D+ K + + + D + Q ++
Sbjct: 302 FVFHYDLPRSLENFYQESGRAGRDGESATSILFFSMGDWKKIDYLIEQK-PDPQEQRIAR 360
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ +V Y E CRR LL +F G + Q CDNC
Sbjct: 361 QQLNQVIDYAEGVDCRRTILLRYF-GERFSGNCGQ------CDNC 398
>gi|147673915|ref|YP_001218455.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227116593|ref|YP_002818489.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262167384|ref|ZP_06035092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
gi|146315798|gb|ABQ20337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227012043|gb|ACP08253.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262024186|gb|EEY42879.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
Length = 620
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 159/283 (56%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L++P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLKEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 167/293 (56%), Gaps = 20/293 (6%)
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
L+ SR ++ + +DEAHCVS WGHDFRP Y+ +S + P VP++A+TATA V D
Sbjct: 858 LYESR--QLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQQFPQVPVIALTATANEKVRMD 915
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTK 241
I L + DP ++ F+R NL+ K + + +R LT +N+ + IIYC +K
Sbjct: 916 IVHHLQMSDPVLLKQSFNRTNLFYEIKWKAANFLDWIRDYILTKQQNK---TGIIYCHSK 972
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE D L++ G++ YHA +S +R +I + ++ I+V+ AT AFGMGIDKPDVR
Sbjct: 973 QSCEVTADRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICATIAFGMGIDKPDVR 1032
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHS 360
VIH P+ L YYQE GRAGRDGL S C FY D + NMI + + D E +E
Sbjct: 1033 FVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMIQRDSELDREGKESH 1092
Query: 361 KTMMKRVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHN 409
+++V +Y E CRRK +L++F + P C CDNC +N
Sbjct: 1093 LAKLRQVVQYCENTSDCRRKQVLHYFN--------ERFDPAHCARKCDNCLNN 1137
>gi|228965757|ref|ZP_04126836.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402559862|ref|YP_006602586.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis HD-771]
gi|423360197|ref|ZP_17337700.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD022]
gi|228793958|gb|EEM41482.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401082287|gb|EJP90557.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD022]
gi|401788514|gb|AFQ14553.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis HD-771]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|373955135|ref|ZP_09615095.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373891735|gb|EHQ27632.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 713
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 10/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ LIAIDEAHC+S WGHDFRP Y L+ L++ P++P++A+TATA + DI L L
Sbjct: 131 KVSLIAIDEAHCISHWGHDFRPEYLMLAGLKIAFPNIPVIALTATADKITRKDILDKLNL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
P + FDR N+ + K++ + L ++ S IIYC ++ E +
Sbjct: 191 NQPREFVSSFDRKNINYRIAPKKNSFTQLIAFLKEHQDD---SGIIYCLSRQSTEDLATA 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L G + YHA + K + + F++D IK++VAT AFGMGI+K +VR V+H PK
Sbjct: 248 LQAQGYSAQAYHAGLEKKIKDQNQERFLRDEIKIIVATIAFGMGINKSNVRFVVHMDLPK 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE-- 368
++ YYQE GRAGRDGL S FY AD K + N+++ SK M+K+++
Sbjct: 308 NIEGYYQETGRAGRDGLPSKALLFYSYADVQKLQSFARVEGNEAQ----SKIMLKKLDDM 363
Query: 369 -KYLELRTCRRKYLLNHF 385
++ +L+TCRR+YLL +F
Sbjct: 364 VRFCQLQTCRRQYLLKYF 381
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 167/293 (56%), Gaps = 20/293 (6%)
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDD 183
L+ SR ++ + +DEAHCVS WGHDFRP Y+ +S + P VP++A+TATA V D
Sbjct: 867 LYESR--QLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQQFPQVPVMALTATANEKVRMD 924
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK--LTNFENQFEGSTIIYCPTK 241
I L + DP ++ F+R NL+ K + + +R LT +N+ + IIYC +K
Sbjct: 925 IVHHLQMSDPVLLKQSFNRTNLFYEIKWKAANFLDWIRDYILTKQQNK---TGIIYCHSK 981
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
CE D L++ G++ YHA +S +R +I + ++ I+V+ AT AFGMGIDKPDVR
Sbjct: 982 QSCEVTSDRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICATIAFGMGIDKPDVR 1041
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHS 360
VIH P+ L YYQE GRAGRDGL S C FY D + NMI + + D E +E
Sbjct: 1042 FVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMIQRDSELDREGKESH 1101
Query: 361 KTMMKRVEKYLE-LRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHN 409
+++V +Y E CRRK +L++F + P C CDNC +N
Sbjct: 1102 LAKLRQVVQYCENTSDCRRKQVLHYFN--------ERFDPAHCARKCDNCLNN 1146
>gi|229012075|ref|ZP_04169254.1| ATP-dependent DNA helicase RecQ [Bacillus mycoides DSM 2048]
gi|229133703|ref|ZP_04262529.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-ST196]
gi|229167360|ref|ZP_04295098.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH621]
gi|423487941|ref|ZP_17464623.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BtB2-4]
gi|423493663|ref|ZP_17470307.1| ATP-dependent DNA helicase RecQ [Bacillus cereus CER057]
gi|423499545|ref|ZP_17476162.1| ATP-dependent DNA helicase RecQ [Bacillus cereus CER074]
gi|423599875|ref|ZP_17575875.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD078]
gi|228615922|gb|EEK73009.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH621]
gi|228649738|gb|EEL05747.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BDRD-ST196]
gi|228749163|gb|EEL99009.1| ATP-dependent DNA helicase RecQ [Bacillus mycoides DSM 2048]
gi|401153334|gb|EJQ60761.1| ATP-dependent DNA helicase RecQ [Bacillus cereus CER057]
gi|401156803|gb|EJQ64205.1| ATP-dependent DNA helicase RecQ [Bacillus cereus CER074]
gi|401234562|gb|EJR41040.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD078]
gi|402436006|gb|EJV68039.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BtB2-4]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|423365441|ref|ZP_17342874.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD142]
gi|401090808|gb|EJP98960.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD142]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|146300558|ref|YP_001195149.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146154976|gb|ABQ05830.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 159/280 (56%), Gaps = 20/280 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S WGHDFRP+Y L L+ P P+LA+TATA DI L L+
Sbjct: 131 ISLIAIDEAHCISSWGHDFRPAYTNLGYLKNRFPSTPVLALTATADKATRVDITKQLNLK 190
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDV 250
+P FDR NL L D + +++ +F EN+ S IIYC ++ E++ +
Sbjct: 191 NPKTFVASFDRKNLSLEVRPALDRV----KQIIDFVENKPNESGIIYCLSRKTTEELAEK 246
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L++NGI + YHA + R + F+ D +VV AT AFGMGIDK +VR VIHY PK
Sbjct: 247 LAKNGIAAKAYHAGLDNTTRAKTQDEFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPK 306
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ YYQEIGRAGRDGL + F AD + LN +++Q + R+++Y
Sbjct: 307 NIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASDGLN-ADVQ---LAKLDRMKQY 362
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ +CRRK LL++F G VT + C CD C++
Sbjct: 363 ADAVSCRRKILLSYF-GELVT--------ENCGNCDICKN 393
>gi|423517540|ref|ZP_17494021.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuA2-4]
gi|401163812|gb|EJQ71157.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuA2-4]
Length = 705
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|163940564|ref|YP_001645448.1| ATP-dependent DNA helicase RecQ [Bacillus weihenstephanensis KBAB4]
gi|163862761|gb|ABY43820.1| ATP-dependent DNA helicase RecQ [Bacillus weihenstephanensis KBAB4]
Length = 705
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|149372419|ref|ZP_01891607.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
gi|149354809|gb|EDM43372.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
Length = 730
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 149/259 (57%), Gaps = 13/259 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVIDDICTSLM 189
I +AIDEAHC+S+WGHDFRP YR L + R+ ++PI+ +TATAT V +DI +L
Sbjct: 136 ISFLAIDEAHCISEWGHDFRPEYRNLKSIIERIG-ENIPIIGLTATATEKVQEDILKNLA 194
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVC 248
+ N F+RPNLY K +I +D+ T F Q EG S IIYC ++ E++
Sbjct: 195 MTSANTFKASFNRPNLYYEVRSKTKNIDSDI---TRFVKQNEGKSGIIYCLSRKRVEELA 251
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+L NGI+ PYHA + K R +F+ + VVVAT AFGMGIDKPDVR VIH
Sbjct: 252 QILQVNGIKAVPYHAGLDAKTRVRHQDMFLMEECDVVVATIAFGMGIDKPDVRFVIHNDM 311
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKR 366
PK + +YYQE GRAGRDG C +Y D K M +P QE +++
Sbjct: 312 PKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMSGKPVAE----QEIGHALLQE 367
Query: 367 VEKYLELRTCRRKYLLNHF 385
+ + E RRK++L++F
Sbjct: 368 MVAFAETSMSRRKFILHYF 386
>gi|229161685|ref|ZP_04289665.1| ATP-dependent DNA helicase RecQ [Bacillus cereus R309803]
gi|228621930|gb|EEK78776.1| ATP-dependent DNA helicase RecQ [Bacillus cereus R309803]
Length = 705
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/266 (41%), Positives = 154/266 (57%), Gaps = 9/266 (3%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L++ R+ I IDEAHCVSQWGHDFRP Y+ L E+R LP VP++A+TATAT V D
Sbjct: 834 LNKRHRLARIVIDEAHCVSQWGHDFRPDYKELGEIRNRLPGVPMIALTATATENVKVDTI 893
Query: 186 TSLMLRDPNIINTGFDRPNLY--LAASVKQDDIMADLRKL--TNFENQFEGSTIIYCPTK 241
+L + I F+RPNL + K ++M + T++ N+ S I+YC ++
Sbjct: 894 HNLKMEGCEIFTQSFNRPNLTYEVRQKGKSSEVMDSIANTIKTSYPNK---SGIVYCLSR 950
Query: 242 VICEKVCDVL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
CE V ++L S+ I+ YHA ++ +R E+ + + V+VAT AFGMGIDKPDV
Sbjct: 951 KACESVAEILASKYKIKADFYHAGVASAKRAEVQERWQTGRVHVIVATIAFGMGIDKPDV 1010
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R VIH+ PK L YYQE GRAGRDG S CY +Y D+T + +E +
Sbjct: 1011 RFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDYTSLQSMIDKGEGSNEQKTRQ 1070
Query: 361 KTMMKRVEKY-LELRTCRRKYLLNHF 385
+ M++ V +Y L CRR +L +F
Sbjct: 1071 RQMLRNVMQYCLNPADCRRVQILAYF 1096
>gi|149179859|ref|ZP_01858364.1| ATP-dependent DNA helicase recQ [Bacillus sp. SG-1]
gi|148852051|gb|EDL66196.1| ATP-dependent DNA helicase recQ [Bacillus sp. SG-1]
Length = 707
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 156/285 (54%), Gaps = 12/285 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI-LAVTATATPVVI 181
+ +L +P I L+A+DEAHC+SQWGHDFRPSY + +L LP P+ LA+TATATP V
Sbjct: 125 VQYLRNLP-IPLVAVDEAHCISQWGHDFRPSYLKIKDLLKGLPSNPVVLALTATATPQVQ 183
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
+DIC SL + + N TGF R NL QD L+ + NQ E S IIY T+
Sbjct: 184 NDICASLEIEEENTFITGFSRENLSFKVIKGQDRSQFALQYVK--ANQDE-SGIIYAATR 240
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+ + + L + G+ YH + QR E+ F+KD ++V+VAT AFGMGI+K +VR
Sbjct: 241 KEVDSLYNKLKKQGVSVGKYHGGMGDVQRNEMQEEFLKDNLQVIVATNAFGMGINKSNVR 300
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V+HY PK++ +YYQE GRAGRDG S C Y D + N D E
Sbjct: 301 YVLHYQLPKNMESYYQEAGRAGRDGGESECLVLYSPQDVQIQRFLISQNTLDPERHTQEL 360
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++++ Y C ++++L++F E P C NC
Sbjct: 361 LKLRQMVDYCHTEGCLQEFILHYF-------GEEDAAPCGKCSNC 398
>gi|423510797|ref|ZP_17487328.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuA2-1]
gi|402453750|gb|EJV85550.1| ATP-dependent DNA helicase RecQ [Bacillus cereus HuA2-1]
Length = 705
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|229521104|ref|ZP_04410525.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
gi|229341989|gb|EEO06990.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
Length = 620
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|419827881|ref|ZP_14351373.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|419831541|ref|ZP_14355010.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|422915915|ref|ZP_16950269.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|423810983|ref|ZP_17714862.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|423846250|ref|ZP_17718634.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|423878417|ref|ZP_17722265.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|423996324|ref|ZP_17739601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|424015029|ref|ZP_17754887.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|424018140|ref|ZP_17757952.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|424623518|ref|ZP_18062004.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|424628094|ref|ZP_18066413.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|424632040|ref|ZP_18070170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|424635129|ref|ZP_18073161.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|424638950|ref|ZP_18076857.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|424647207|ref|ZP_18084895.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|443526077|ref|ZP_21092179.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
gi|341641612|gb|EGS66137.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|408017262|gb|EKG54777.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|408022773|gb|EKG59966.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|408028170|gb|EKG65081.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|408028453|gb|EKG65344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|408038274|gb|EKG74625.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|408059843|gb|EKG94584.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|408624245|gb|EKK97194.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|408637259|gb|EKL09328.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|408644873|gb|EKL16546.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|408646151|gb|EKL17772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|408652428|gb|EKL23643.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|408855314|gb|EKL95021.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|408862584|gb|EKM02091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|408871261|gb|EKM10504.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|443455544|gb|ELT19309.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
Length = 611
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|401626200|gb|EJS44156.1| sgs1p [Saccharomyces arboricola H-6]
Length = 1463
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 814 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 873
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY K + + ++ +NF+NQ + IIYC +K CE+
Sbjct: 874 KEPVFLKQSFNRTNLYYEVKKKTKNTIFEICDAVKSNFKNQ---TGIIYCHSKKSCEQTS 930
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ +NGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 931 AQMQKNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 990
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 991 PRTLEGYYQETGRAGRDGKYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1050
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1051 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1087
>gi|229030497|ref|ZP_04186534.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1271]
gi|228730807|gb|EEL81750.1| ATP-dependent DNA helicase RecQ [Bacillus cereus AH1271]
Length = 705
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRHAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDTDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 193/391 (49%), Gaps = 68/391 (17%)
Query: 43 GSSVTMAESQVPPDKCCDNCRQVV---------YMTPEYVTNNTSFLSRIPRIVLIAIDE 93
G + T+ S PP+ D RQ++ Y+TPE + + F++
Sbjct: 164 GVNATVLNSNTPPESVKDVHRQMIDARSELKLLYVTPEKIAKSKRFMA------------ 211
Query: 94 AHCVSQWGHDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPS 153
C+ + +Y+ L+RI AIDE HC SQWGHDFRP
Sbjct: 212 --CLEK-------AYKAN-------------LLTRI------AIDEVHCCSQWGHDFRPD 243
Query: 154 YRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAAS--- 210
Y+ L L+ D PIL +TATAT V+DD+ L L+ + GF+RPNL+
Sbjct: 244 YKILGLLKRQFTDTPILGLTATATMDVLDDVKGILGLQGCQVFRAGFNRPNLFYEVRPKP 303
Query: 211 VKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQ 269
KQ + + +L KL N E F+G S IIYC ++ E + + L + GIQ PYHA + +
Sbjct: 304 SKQAEFVEELIKLINGE--FKGQSGIIYCFSRKDTETMAENLKKGGIQAHPYHAMLDAQY 361
Query: 270 RKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSS 329
R ++H + ++ I+VVVAT AFGMGIDKPDVR VIH+ K + YYQE GRAGRD +
Sbjct: 362 RSQVHRNWKENNIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDEPA 421
Query: 330 VCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGS 388
C +Y D F ++ M+ Q + + V + TCRR + HF
Sbjct: 422 RCIVYYGIGDVFRQSTMVVTE-------QTGQQKLYNMVAYCVAPATCRRSLIGQHFG-- 472
Query: 389 SVTVAESQVPPDKCCDNCRHN-EMLELEQVP 418
E Q ++ CD C+ +++E + +P
Sbjct: 473 --ERWEGQARCNRMCDVCQSGAQVVEKDMLP 501
>gi|408491728|ref|YP_006868097.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
gi|408469003|gb|AFU69347.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
Length = 728
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 149/258 (57%), Gaps = 11/258 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVIDDICTSLM 189
I +AIDEAHC+S+WGHDFRP YR L + R+ ++PI+ +TATATP V +DI +L
Sbjct: 136 ISFLAIDEAHCISEWGHDFRPEYRNLKNIIERIG-ENIPIIGLTATATPKVQEDILKNLR 194
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ + F+RPNLY K DD+ +D+ K + G IIYC ++ E++
Sbjct: 195 IPNSKTFKDSFNRPNLYYEIRPKTDDVDSDIIKFVKKNSGKSG--IIYCLSRKRVEQLSQ 252
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NG++ PYHA + K R +F+ + I VVVAT AFGMGIDKPDVR V+H P
Sbjct: 253 ALQVNGVKAVPYHAGLDAKSRSRHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVVHNDIP 312
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEHSKTMMKRV 367
K + +YYQE GRAGRDG C +Y D K + ++ I QE +++ V
Sbjct: 313 KSIESYYQETGRAGRDGGEGHCVAYYNHKDIEK----LEKFMSGKPIAEQEIGHALLQDV 368
Query: 368 EKYLELRTCRRKYLLNHF 385
+ E RRKY+L++F
Sbjct: 369 VAFAESSISRRKYILHYF 386
>gi|419835117|ref|ZP_14358565.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|421341784|ref|ZP_15792193.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|421353007|ref|ZP_15803345.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|423733466|ref|ZP_17706697.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|424007762|ref|ZP_17750719.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
gi|395946961|gb|EJH57619.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|395955466|gb|EJH66062.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|408632325|gb|EKL04786.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|408859258|gb|EKL98919.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|408867878|gb|EKM07231.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
Length = 611
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 158/296 (53%), Gaps = 12/296 (4%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP Y+ L LR P VP +A+TATATP V DI L + +P
Sbjct: 761 IDEAHCVSQWGHDFRPDYKRLKCLRDNYPKVPTMALTATATPRVRTDILHQLGMTNPKWF 820
Query: 197 NTGFDRPNLYLAASVKQ-----DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+GF+RPNL + K+ D+++A + +T + N I+YC ++ C+ +
Sbjct: 821 MSGFNRPNLRYSIITKKGKNCSDEVIAMI--MTKYRNT---CGIVYCLSRKDCDDYAAQM 875
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+NGI+ YHA ++ QR G ++ D I V+ AT AFGMGIDKP+VR VIH PK
Sbjct: 876 KKNGIKALSYHAGLTDNQRSNCQGRWIADEIHVICATIAFGMGIDKPNVRFVIHAALPKS 935
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ YYQE GRAGRDG + C FY AD + MI N + I H + K V
Sbjct: 936 IEGYYQESGRAGRDGEIADCILFYHYADMHRIRKMIELDNQSPQVIGTHMDNLFKMVAFC 995
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
CRR LN+F G + CDNCR E + + V + +++
Sbjct: 996 ENTTDCRRSLQLNYF-GEIFDRQQCISNKTTACDNCRCKEEITMLDVTEDAKEIMK 1050
>gi|417819060|ref|ZP_12465679.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|423944442|ref|ZP_17733123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|423973888|ref|ZP_17736668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
gi|340042950|gb|EGR03911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|408662447|gb|EKL33390.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|408666471|gb|EKL37258.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
Length = 611
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|422908717|ref|ZP_16943388.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
gi|341638676|gb|EGS63315.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
Length = 611
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|374673897|dbj|BAL51788.1| ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
IO-1]
Length = 592
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 157/264 (59%), Gaps = 6/264 (2%)
Query: 124 LFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVID 182
+FL ++P I L+AIDEAHC+SQWGHDFRPSY + LP P +LA+TATATP V D
Sbjct: 123 VFLQKLP-IDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVAD 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEGSTIIYCPTK 241
DI L + + I TGF R NL VK D L+ L N E+ E + IIY T+
Sbjct: 182 DIQKLLSISPSHTIKTGFLRENLRFEV-VKGMDKRTFLKNYLKNQES--EAAGIIYASTR 238
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++C+ L+ N + YHA +S ++R+ LF+ D + ++VAT AFGMGI+KP+VR
Sbjct: 239 KEVEEICEWLNHNHFKAVRYHAGLSEQERQMNQELFLFDEVPIMVATNAFGMGINKPNVR 298
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY P + +YYQE GRAGRDGL S + D N + + + D +EH
Sbjct: 299 FVIHYALPATIESYYQEAGRAGRDGLESDAILLFSPNDLRIRNFLIEQSEGDEAHKEHEY 358
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++++ Y TC ++Y+L +F
Sbjct: 359 EKLRQMQAYTSAETCLQRYILQYF 382
>gi|302387276|ref|YP_003823098.1| ATP-dependent DNA helicase RecQ [Clostridium saccharolyticum WM1]
gi|302197904|gb|ADL05475.1| ATP-dependent DNA helicase RecQ [Clostridium saccharolyticum WM1]
Length = 610
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 152/264 (57%), Gaps = 14/264 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I ++A+DEAHCVSQWG DFRPSY + + LP P++ A TATAT V +D+ LML
Sbjct: 130 ISMVAVDEAHCVSQWGQDFRPSYLKIVDFINKLPKRPVISAFTATATKEVREDVIDILML 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
++P +++TG+DRPNLYL +D L N+ E + IIYC T+ + E+VCD
Sbjct: 190 QEPAVVSTGYDRPNLYLGVQSPKDKYAT----LKNYVERHPDQCGIIYCLTRKLVEEVCD 245
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L++ G YHA + ++R++ F+ D +++VAT AFGMGIDK +VR V+HY P
Sbjct: 246 RLNQEGFSATRYHAGLRDEERRKNQDDFIYDRSRIMVATNAFGMGIDKSNVRFVLHYNMP 305
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE--------IQEHSK 361
K+L +YYQE+GR RDG C Y D N M N ++ E + E +
Sbjct: 306 KNLESYYQEVGRCSRDGEPGECILLYSGQDVVTNQMFIDNNQDNQELDPVTSRMVTERDR 365
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
++++ Y C R Y+L +F
Sbjct: 366 ERLRKMTFYAFTNECLRDYILRYF 389
>gi|423662335|ref|ZP_17637504.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VDM022]
gi|401297954|gb|EJS03559.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VDM022]
Length = 705
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 167/298 (56%), Gaps = 18/298 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCD 249
+ N I T F+R NL + +K D A L + +NQ E S IIY T+ + +++ +
Sbjct: 191 INQENTIMTTFERENLSFSV-IKGQDRNAYLADYIH-QNQKE-SGIIYAATRKVVDQLYE 247
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY P
Sbjct: 248 DLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQLP 307
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 308 KNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNMTD 366
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 367 YCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|288800855|ref|ZP_06406312.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332316|gb|EFC70797.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
Length = 725
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL + +I AIDEAHC+S+WGHDFRP YR + + + + P++A+TATAT V DI
Sbjct: 131 FLKTV-KISFYAIDEAHCISEWGHDFRPEYRNIRPMINNIGEAPVIALTATATDKVRTDI 189
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
SL + D + F+R NLY K +D+ ++L F + EG S I+YC ++
Sbjct: 190 KKSLGILDAKEFKSSFNRANLYYEVRPKTNDVD---KELIKFIKKNEGKSGIVYCLSRKK 246
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E++ +L N I+ YHA + R + F+ + I V+VAT AFGMGIDKPDVR V
Sbjct: 247 VEELSAILQANNIKAAAYHAGLDNIPRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFV 306
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
+HY PK L YYQE GRAGRDG C FY D K F +E Q+ + +
Sbjct: 307 VHYDIPKSLEGYYQETGRAGRDGGEGHCLAFYSYKDIQKLEK-FMEGKPVAE-QDIGRQL 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+K Y E CRRK LL++F + P + C CDNC
Sbjct: 365 LKETAAYAESSVCRRKMLLHYFG--------EEYPKENCGNCDNC 401
>gi|423616875|ref|ZP_17592709.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD115]
gi|401256899|gb|EJR63104.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VD115]
Length = 705
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICKTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V++AT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMIATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|311068600|ref|YP_003973523.1| ATP-dependent nucleic acid helicase [Bacillus atrophaeus 1942]
gi|419820760|ref|ZP_14344369.1| putative ATP-dependent nucleic acid helicase [Bacillus atrophaeus
C89]
gi|310869117|gb|ADP32592.1| putative ATP-dependent nucleic acid helicase [Bacillus atrophaeus
1942]
gi|388475234|gb|EIM11948.1| putative ATP-dependent nucleic acid helicase [Bacillus atrophaeus
C89]
Length = 592
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 153/278 (55%), Gaps = 19/278 (6%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLMLRD 192
L+AIDEAHC+SQWGHDFRPSYR + L L + P I+A+TATATP V +DIC L +
Sbjct: 135 LVAIDEAHCISQWGHDFRPSYRNIEILFRELKEKPVIMALTATATPEVHEDICKQLHIEK 194
Query: 193 PNIINTGFDRPNLY--LAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
N + TGF R NL +A +D + + E + IIY T+ +++C+
Sbjct: 195 ENTVYTGFSRDNLTFKVAKGENKDRFIEEYLNRNKLE-----AGIIYTATRKEADRICEK 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L R I YH + + RKE F+ D I+V+VAT AFGMGIDK ++R V+HY PK
Sbjct: 250 LKRQHINAGRYHGGLPDEVRKEQQEQFLNDQIQVMVATSAFGMGIDKSNIRFVLHYQIPK 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
D+ +YYQE GRAGRDGL S C + D + + + +D Q+ ++++ Y
Sbjct: 310 DMESYYQEAGRAGRDGLDSECILLFSPQDIMVQRFLIEQSASDEGKQKQDLKKLRQMVDY 369
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
C ++++L +F +V P C C NC
Sbjct: 370 CHTEDCLQRFILKYF---------GEVDPAACGQCGNC 398
>gi|229103419|ref|ZP_04234101.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock3-28]
gi|228679915|gb|EEL34110.1| ATP-dependent DNA helicase RecQ [Bacillus cereus Rock3-28]
Length = 705
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICKTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V++AT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDHDRNEQQELFLRDEVSVMIATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|15673790|ref|NP_267965.1| ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
Il1403]
gi|12724835|gb|AAK05906.1|AE006411_1 ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
Il1403]
Length = 592
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 157/263 (59%), Gaps = 6/263 (2%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDD 183
FL ++P I L+AIDEAHC+SQWGHDFRPSY + LP P +LA+TATATP V DD
Sbjct: 124 FLQKLP-IDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVADD 182
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEGSTIIYCPTKV 242
I L + + I TGF R NL VK D L+ L N E+ E + IIY T+
Sbjct: 183 IQKLLSISPSHTIKTGFLRENLRFEV-VKGMDKRTFLKNYLKNQES--EAAGIIYASTRK 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++C+ L+ N ++ YHA +S ++R+ LF+ D + ++VAT AFGMGI+KP+VR
Sbjct: 240 EVEEICEWLNHNHFKSVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY P + +YYQE GRAGRDGL S + D N + + + D +EH
Sbjct: 300 VIHYALPATIESYYQEAGRAGRDGLESDANLLFSPNDLRIRNFLIEQSEGDEAHKEHEYE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++++ Y TC ++Y+L +F
Sbjct: 360 KLRQMQAYTSAETCLQRYILQYF 382
>gi|110636721|ref|YP_676928.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
gi|110279402|gb|ABG57588.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
Length = 725
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 20/290 (6%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
ILFL + I +AIDEAHC+S+WGHDFRP YR + + + + +PI+A+TATATP V
Sbjct: 128 ILFLKK-AAISFVAIDEAHCISEWGHDFRPEYRKIHSIIESINNNIPIIALTATATPKVQ 186
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPT 240
DI +L + D + + F+R NL+ K D +KL F +G S IIYC +
Sbjct: 187 LDIQKNLQMDDAVLFKSSFNRENLFYEVRPKGDT----KKKLIKFIKARKGQSGIIYCLS 242
Query: 241 KVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDV 300
+ E++ ++L N ++ PYHA + R F+ + V+VAT AFGMGIDKPDV
Sbjct: 243 RKKVEEIAELLRVNDVKALPYHAGLEPAVRMGNQDAFLNEDADVIVATIAFGMGIDKPDV 302
Query: 301 RCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHS 360
R V+HY PK L YYQE GRAGRDG C FY D K F + +E +E++
Sbjct: 303 RFVVHYDTPKSLEGYYQETGRAGRDGNEGHCLMFYSMNDIIKLEK-FNKDKTVTE-RENA 360
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
+ ++ + Y E CRRK LL +F G ++ D C CDNC++
Sbjct: 361 RQLLNEMSSYAESSVCRRKQLLFYF-GENLA--------DDCGFCDNCKN 401
>gi|255073857|ref|XP_002500603.1| predicted protein [Micromonas sp. RCC299]
gi|226515866|gb|ACO61861.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 390
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 16/293 (5%)
Query: 103 DFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRL 162
DFR Y +L + D ++R ++ L+A+DEAHC+SQWGHDFR SYR L+ +R
Sbjct: 101 DFRVVYVTPEKLVGDIDD-----MARDGKLGLVAVDEAHCLSQWGHDFRKSYRGLTLIRT 155
Query: 163 ---PLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMAD 219
P +VP++A+TATA V +DI L L+ P++ DR NL + S K+ AD
Sbjct: 156 QLSPNGEVPVMALTATAVEKVREDIKDVLALKRPHVARNSCDRTNLRILVSKKRGG-AAD 214
Query: 220 LRKLTNFENQFEGSTIIYCPTKVICEKVCDVL-SRNGIQN-----RPYHAHISLKQRKEI 273
+ +GS ++YC TK E + VL ++ QN YHA +++ +R
Sbjct: 215 HLHIYERCRDAKGSVVVYCVTKRDAEDIATVLKNKFATQNIAAGVEVYHAGLAMSRRDAT 274
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
H F+ +KVVVAT AFGMGIDKPD+R V+HYGAPK + YYQ++GRAGRDGL S
Sbjct: 275 HKGFLTGSVKVVVATVAFGMGIDKPDIRLVMHYGAPKTMEEYYQQVGRAGRDGLPSDVEM 334
Query: 334 FYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLELR-TCRRKYLLNHF 385
Y DF++ + F D+ ++ K +E++ R CRR +L HF
Sbjct: 335 IYGDGDFSRYSDEFYVGKLDAAARKTQKESTDALERFSRSREVCRRASILAHF 387
>gi|261250050|ref|ZP_05942627.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939554|gb|EEX95539.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 602
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 156/284 (54%), Gaps = 13/284 (4%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ + L IA+DEAHC+SQWGHDFRP Y L +L+ P VP++A+TATA
Sbjct: 125 FIERLESLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRK 184
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L +P+ FDRPN+ K + +R L ENQ IIYC ++
Sbjct: 185 DIMQRLQLNEPHTYLGSFDRPNIRYTLVEKHKPVSQVVRFL---ENQRGSCGIIYCGSRK 241
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V + L NG++ YHA + +R + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 242 KVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRF 301
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+H+ P+++ +YYQE GRAGRDGL + Y AD + + +D ++
Sbjct: 302 VVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEK-DDGPQKQVEAH 360
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR+ LLN+F E + P CD C
Sbjct: 361 KLNAMSAFAEAQTCRRQVLLNYF-------GEYREKPCGNCDIC 397
>gi|357059803|ref|ZP_09120582.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
gi|355377445|gb|EHG24664.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
Length = 726
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 151/279 (54%), Gaps = 16/279 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I A+DEAHC+S+WGHDFRP YR + + + PI+A+TATAT V DI SL +
Sbjct: 136 KISFYAVDEAHCISEWGHDFRPEYRNIRVVIDEIERAPIIALTATATDKVRFDIKKSLAI 195
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+D + F+R NLY K +I +++ F Q G S IIYC ++ +++
Sbjct: 196 QDAEEFKSSFNRANLYYEVRPKTKEIN---KEIVTFIRQNAGKSGIIYCLSRKTVDELAK 252
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
VL N I+ +PYHA + +R + LF+ I V+VAT AFGMGIDKPDVR VIHY P
Sbjct: 253 VLQANEIKAKPYHAGLEPDERSQTQDLFLMQDIDVIVATIAFGMGIDKPDVRFVIHYDIP 312
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
K L YYQE GRAGRD C TFY D K F + E +E ++
Sbjct: 313 KSLEGYYQETGRAGRDDGEGKCITFYSPDDLKKLEK-FMEKKGEQE-REIGYLLLAETAA 370
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y E CRRK LL++F + D C CDNC
Sbjct: 371 YAESSICRRKLLLHYFG--------EEYLKDNCGNCDNC 401
>gi|417955149|ref|ZP_12598172.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342813701|gb|EGU48661.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 612
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 156/284 (54%), Gaps = 13/284 (4%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ + L IA+DEAHC+SQWGHDFRP Y L +L+ P VP++A+TATA
Sbjct: 135 FIERLESLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRK 194
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L +P+ FDRPN+ K + +R L ENQ IIYC ++
Sbjct: 195 DIMQRLQLNEPHTYLGSFDRPNIRYTLVEKHKPVSQVVRFL---ENQRGSCGIIYCGSRK 251
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V + L NG++ YHA + +R + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 252 KVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRF 311
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+H+ P+++ +YYQE GRAGRDGL + Y AD + + +D ++
Sbjct: 312 VVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEK-DDGPQKQVEAH 370
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR+ LLN+F E + P CD C
Sbjct: 371 KLNAMSAFAEAQTCRRQVLLNYF-------GEYREKPCGNCDIC 407
>gi|313236291|emb|CBY11611.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 162/285 (56%), Gaps = 14/285 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
+S+IP + LIAIDEAHCVS+WGHDFR +Y LS L+ P+ P++A+T TAT + D+I
Sbjct: 345 MSKIP-VALIAIDEAHCVSEWGHDFRKAYMGLSSLKQLSPNTPVVALTGTATVNMRDEII 403
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFE-GSTIIYCPTKVIC 244
L L + FDRPN+++ VK+ M D L N + S IIYC TK +
Sbjct: 404 KCLDLSNAQTTVGSFDRPNIFI--KVKKKTTMFD--DLINSDAILPYKSIIIYCRTKQLS 459
Query: 245 EKVCDVLS--RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V L+ +N ++ YHA +S R+ I F++ KV+VAT AFGMGIDK DVR
Sbjct: 460 EDVATKLAELKNETKSTFYHAGLSTDDRESIQNEFLRGQTKVIVATIAFGMGIDKADVRR 519
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSK 361
VIHYG P L AYYQEIGRAGRDG SS C F+ D F + I ++ + +E
Sbjct: 520 VIHYGIPSSLEAYYQEIGRAGRDGKSSDCIVFFNEQDKFIAEHFI--KKTSNPKRKEQLI 577
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ V TCRR+++L++F + S+ CCD C
Sbjct: 578 KGFQDVMNLFSTTTCRREFILDYF---GEKIDRSRTDFHVCCDIC 619
>gi|295133854|ref|YP_003584530.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981869|gb|ADF52334.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 702
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 161/280 (57%), Gaps = 20/280 (7%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I LIAIDEAHC+S WGHDFRP+Y L L+ + PI+A+TATA DIC L +
Sbjct: 131 ISLIAIDEAHCISSWGHDFRPAYTQLGYLKKRFSNTPIIALTATADKATRHDICQQLNIP 190
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDV 250
D + FDR NL L V+Q + ++ F +++ S IIYC ++ E++ +
Sbjct: 191 DAKKHISSFDRKNLSL--EVRQG--IKRFEQIIKFIKSRPSESGIIYCLSRKNTEELAEK 246
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ + YHA + ++R+ I F+ D +++ AT AFGMGIDK ++R VIHY PK
Sbjct: 247 LQQKGLDAKAYHAGLKHEERESIQDDFINDKTEIICATVAFGMGIDKSNIRWVIHYNMPK 306
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+L YYQEIGRAGRDGLSS F+ AD + F N + +IQ + R+++Y
Sbjct: 307 NLEGYYQEIGRAGRDGLSSDTLLFHSYADVVQLQR-FAENTKNKDIQ---VAKLDRMKQY 362
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRH 408
E TCRRK LL++F ++ + C CD C++
Sbjct: 363 AEALTCRRKILLSYF---------GEIKQENCGNCDICKN 393
>gi|373486606|ref|ZP_09577279.1| ATP-dependent DNA helicase, RecQ family [Holophaga foetida DSM
6591]
gi|372011467|gb|EHP12062.1| ATP-dependent DNA helicase, RecQ family [Holophaga foetida DSM
6591]
Length = 578
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 152/281 (54%), Gaps = 16/281 (5%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIA+DEAHC+S WGHDFRP+YR L L+ L P+LA+TATATP V +DI L + +P
Sbjct: 211 LIAVDEAHCISHWGHDFRPAYRNLQNLKARL-KAPVLALTATATPEVREDIVQQLGMDNP 269
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSR 253
F RPNL+L A K D+ L + + S IIYC + E + L
Sbjct: 270 FRFQGSFFRPNLHLHAIKKGGDVKVKESMLRLIQARRGQSGIIYCLARKSAESTAEYLQS 329
Query: 254 NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
GI+ + YHA ++ ++R+ + F +D + VV AT AFGMGIDK ++R VIH PK +
Sbjct: 330 QGIRAKAYHAGLAPEERESVQDAFRRDDLDVVTATIAFGMGIDKSNIRYVIHRDMPKSIE 389
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQEIGRAGRDG + C FY AD M + L E + + ++ + + E
Sbjct: 390 GYYQEIGRAGRDGAEADCILFYSWADV----MSLERMLEGQEQTDSQRQQVRAMFHFAEE 445
Query: 374 RTCRRKYLLNHFKGSSVTVAESQVPPD--KCCDNCRHNEML 412
+TCR + L + + PD CD C H ++L
Sbjct: 446 KTCRHRGLARYL---------GEQTPDCGSSCDVCGHWDIL 477
>gi|262172709|ref|ZP_06040387.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
gi|261893785|gb|EEY39771.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
Length = 620
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 159/283 (56%), Gaps = 16/283 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P++P++A+TATA DI
Sbjct: 147 LSNLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L DP+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNDPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F E + P CD C
Sbjct: 383 MG---AFAEAQTCRRQVLLNYF-------GEYRDQPCGNCDIC 415
>gi|407705241|ref|YP_006828826.1| lipoprotein [Bacillus thuringiensis MC28]
gi|407382926|gb|AFU13427.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis MC28]
Length = 705
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICKTLE 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V++AT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSISKYHAGMSDHDRNEQQELFLRDEVSVMIATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|294944133|ref|XP_002784103.1| ATP-dependent DNA helicase Q1, putative [Perkinsus marinus ATCC
50983]
gi|239897137|gb|EER15899.1| ATP-dependent DNA helicase Q1, putative [Perkinsus marinus ATCC
50983]
Length = 369
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 147/255 (57%), Gaps = 10/255 (3%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFR SY L L+ DVPI A+TATATP + D+ L + + I
Sbjct: 113 IDEAHCVSQWGHDFRSSYLKLKNLKAAFDDVPITALTATATPGIAQDVQAQLRMTNTVFI 172
Query: 197 NTGFDRPNL-YLAASVKQDDIMADLRKLT---NFENQFEGSTIIYCPTKVICEKVCDVLS 252
G +R NL Y + ++ D+ +L N E Q + S I+YC TKV CE V D L
Sbjct: 173 KGGINRANLAYRVMKKSRSRVLNDILQLIKDMNGEVQGKASGIVYCGTKVECETVADGLK 232
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
G+ YHA + R +I ++ D I+V+VAT AFGMGI+KPDVR VIHYG K +
Sbjct: 233 NLGVTAGFYHASMDTDDRTDIQRRWMADKIQVIVATIAFGMGINKPDVRFVIHYGLSKTM 292
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNL---NDSEIQEHSKTM--MKRV 367
YYQE GRAGRDG S+ FY D K +++ + N+ N + + K + + V
Sbjct: 293 EGYYQESGRAGRDGYPSLAVLFYDYQDKVKQDVMIRTNVTTRNSAAADQAEKKIDSLLSV 352
Query: 368 EKYLELRT-CRRKYL 381
+Y E R+ CRRK +
Sbjct: 353 VEYCENRSLCRRKLI 367
>gi|124484849|ref|YP_001029465.1| hypothetical protein Mlab_0020 [Methanocorpusculum labreanum Z]
gi|124362390|gb|ABN06198.1| ATP-dependent DNA helicase, RecQ family [Methanocorpusculum
labreanum Z]
Length = 493
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 150/276 (54%), Gaps = 8/276 (2%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ L A+DEAHC+S WGH FRP YR + LR P VPI A TATAT V +DI L L
Sbjct: 131 KVALFAVDEAHCISMWGHQFRPEYREIKHLRDKFPGVPIAAFTATATLRVREDIVNELRL 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
DP FDR NL + + + + + ++ + IIYC ++ E++ +
Sbjct: 191 NDPAEFIGSFDRRNLRYSVFAEPNAQVRMQKIISYVTAHKDDPGIIYCFSRASTEELAER 250
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + I PYHA + +R + F+ + I+V+ AT AFGMGIDKPDVR VIH PK
Sbjct: 251 LRKVHIMANPYHAGLPTPERSRVQEGFLNNSIRVICATVAFGMGIDKPDVRYVIHAHMPK 310
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
D+ +YYQE GRAGRDG + C FY D K + + D + E ++ + ++ Y
Sbjct: 311 DIESYYQETGRAGRDGKAGECLLFYSGGDRRKIENMLEREFTDKKKSEIAREKLDQMYAY 370
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++CRR+ LL++F + ++ P CD C
Sbjct: 371 CTAKSCRRQLLLSYF--------DEEIQPCGNCDTC 398
>gi|422305600|ref|ZP_16392796.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
gi|408628475|gb|EKL01222.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
Length = 611
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCSNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|229173465|ref|ZP_04301009.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MM3]
gi|228610159|gb|EEK67437.1| ATP-dependent DNA helicase RecQ [Bacillus cereus MM3]
Length = 705
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 166/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFTVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDTDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|229527301|ref|ZP_04416694.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
gi|229335309|gb|EEO00793.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
Length = 620
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCSNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|418742803|ref|ZP_13299172.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|410749546|gb|EKR06530.1| ATP-dependent DNA helicase, RecQ family [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 621
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 18/282 (6%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLMLRDP 193
IA+DEAHCVSQWGHDFRP YR L +LR P +P++A+TATAT VI DI SL L++P
Sbjct: 143 IAVDEAHCVSQWGHDFRPEYRKLYKLRDKYPKPIPVVALTATATSRVIKDISDSLGLKNP 202
Query: 194 NIINTGFDRPNLYLAASVKQDDIMAD--LRKL---TNFENQFEGSTIIYCPTKVICEKVC 248
+I F R NL + Q++I + L KL NF+ G I+YC T+ E V
Sbjct: 203 ILIKGSFYRENLSFSVRFPQNEISRENELLKLLVQGNFQKVSSGRVIVYCATRQKVETVY 262
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L +NG + YHA + R++ + V+VAT AFGMG+D+P+VR VIHY
Sbjct: 263 GFLKKNGFKVGKYHAGRTDSSREKTQDGYNNGKTNVLVATNAFGMGLDQPNVRLVIHYQI 322
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
P L +YYQE GRAGRDG S C FY +D I N ++ +T++ ++
Sbjct: 323 PASLESYYQEAGRAGRDGKPSDCVLFYHPSDLVTQGFIIGKENN----RKGGETLLSHLK 378
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+Y CR++ L ++F + ++ P K CD C E
Sbjct: 379 EYSISNKCRQQTLCSYF--------DEEILPCKTCDICLEKE 412
>gi|393763185|ref|ZP_10351808.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
gi|392606102|gb|EIW88990.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
Length = 606
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 153/284 (53%), Gaps = 13/284 (4%)
Query: 125 FLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ + L AIDEAHCVSQWGHDFRP Y L++LR P VP++A+TATA P
Sbjct: 123 FIERLQEVGVSLFAIDEAHCVSQWGHDFRPDYMALAQLRQHFPGVPVMALTATADPATQQ 182
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+ P I FDRPN+ K + L L EN S IIYC ++
Sbjct: 183 DIVQQLALQQPFIHRGSFDRPNIRYTVQEKFRPLEQLLAYLKQQENH---SGIIYCSSRR 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+++ L G + YHA R+++ F +D + ++VAT AFGMG+DKP++R
Sbjct: 240 KVDELTAQLQEKGFKAAAYHAGHDATHRQQVQDAFKRDDLALIVATVAFGMGVDKPNIRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+H+ P+ + AYYQE GRAGRDG+++ + AD + Q N+ + +
Sbjct: 300 VVHFELPRTIEAYYQETGRAGRDGVAAEALLLFDPADIGRMKRWLQTEENNLRAEVTWQR 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR LLN+F E++ P CD C
Sbjct: 360 FLS-MAAFAEAQTCRRLVLLNYF-------GEARQQPCGNCDIC 395
>gi|440296127|gb|ELP88968.1| ATP-dependent DNA helicase recQ, putative [Entamoeba invadens IP1]
Length = 517
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 161/293 (54%), Gaps = 45/293 (15%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I L AIDEAHC+SQWGHDFRPSY LS L+ P +P++A+TATAT V DDI +L L
Sbjct: 155 KIGLFAIDEAHCISQWGHDFRPSYLELSYLKQTFPQIPVIALTATATEKVKDDIIKALGL 214
Query: 191 RDPNIINTGFDRPNLYLAASVK------QDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
+DPNI + FDRPN+Y K Q+++ L+ LT ++Q EG I+YC T+ C
Sbjct: 215 KDPNIFTSTFDRPNIYFRVLYKDLYENPQEEL---LKYLT--QHQQEGG-IVYCSTRNEC 268
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + L G + YHA +S R+ + ++ + +V+AT AFGMGID+ DVR V+
Sbjct: 269 ELLEKYLKSKGFRVGKYHAGMSASDRESVQKMWERKETGIVIATVAFGMGIDRSDVRFVV 328
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H+ PK++ + QE GRAGRDG + F+ DF+++ +
Sbjct: 329 HWNIPKNIEGFIQEAGRAGRDGKPAESVIFFGNDDFSRDKAL------------------ 370
Query: 365 KRVEKYLELR------TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEM 411
EK E+R CRRK +L HF + ++CCD C NEM
Sbjct: 371 -EGEKSEEIRELCVECVCRRKCILKHF------CETLERKNERCCDLC--NEM 414
>gi|328873248|gb|EGG21615.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
fasciculatum]
Length = 926
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 160/292 (54%), Gaps = 29/292 (9%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
++AIDE HC+SQWGHDFRP Y LS R P+VPI+A+TAT+TP + ++ +SL +R P
Sbjct: 238 MVAIDECHCLSQWGHDFRPDYVNLSIFRDMFPNVPIMALTATSTPEIEREVISSLKMRKP 297
Query: 194 NIINTGFDRPNLYLAASVKQ----------DDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
I + +RPN++ K D I + + STIIYCPT
Sbjct: 298 FISHASRNRPNIFYQIIQKTKGTGRKEKDWDVITKIIHTMQEKRPNQSNSTIIYCPTIEE 357
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
++ L I+ Y++ +S++QRK IH F+ + I VVVAT AFGMGIDKPD+R +
Sbjct: 358 SVELNYFLKTKQIRTVCYNSKVSMEQRKTIHRDFLYNNIDVVVATIAFGMGIDKPDIRLI 417
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNN--MIFQPNLNDSEIQEHSK 361
IHYG K + YYQE GR GRDGL S+ TF+ DF K + + PNL +
Sbjct: 418 IHYGPSKSIEEYYQESGRGGRDGLPSLSITFFSRQDFIKGDYRITKSPNL---------Q 468
Query: 362 TMMKRVEKYLELRT-------CRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
T+ +KY E ++ CRRK +LN G S T V + CDNC
Sbjct: 469 TVSNTFKKYSEYKSFLLNGVECRRKMVLNAL-GESYTTPTDVVGGCQGCDNC 519
>gi|118444315|ref|YP_878375.1| ATP-dependent DNA helicase [Clostridium novyi NT]
gi|118134771|gb|ABK61815.1| ATP-dependent DNA helicase [Clostridium novyi NT]
Length = 812
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 155/264 (58%), Gaps = 6/264 (2%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVI 181
FLS I +I +AIDEAHCVSQWGHDFR SYR +++ + PI+ A TATA+ V
Sbjct: 123 FLSAIKDVKISQVAIDEAHCVSQWGHDFRVSYRNVAKFIDGFKERPIVTAFTATASNEVR 182
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DDI L L++P + TGFDR NL + +K A + L EN E S IIY T+
Sbjct: 183 DDIINLLRLKNPKVFITGFDRENLNITI-IKSGSKKAYV--LNYIENNKEDSGIIYAATR 239
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+ + D LS+ G YHA +S +RK+ F+ D ++++VAT AFGMGIDKP++R
Sbjct: 240 KEVDNIYDNLSKKGFSIGRYHAGLSDDERKQNQEDFIHDRVRIMVATNAFGMGIDKPNIR 299
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK++ AYYQEIGRAGRDG S C + D + + ++ + E ++
Sbjct: 300 YVIHYSMPKNIEAYYQEIGRAGRDGEKSECILLFAPGDIHIQKYLIEVSVENPERKKKQY 359
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
++ + + C RKY+LN+F
Sbjct: 360 EKLQEMVDLVYSNDCYRKYILNYF 383
>gi|423402487|ref|ZP_17379660.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG2X1-2]
gi|423476816|ref|ZP_17453531.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG6X1-1]
gi|401650759|gb|EJS68328.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG2X1-2]
gi|402433123|gb|EJV65178.1| ATP-dependent DNA helicase RecQ [Bacillus cereus BAG6X1-1]
Length = 705
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRIVDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHSEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|402827318|ref|ZP_10876407.1| ATP-dependent DNA helicase RecQ [Sphingomonas sp. LH128]
gi|402259152|gb|EJU09426.1| ATP-dependent DNA helicase RecQ [Sphingomonas sp. LH128]
Length = 627
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 147/283 (51%), Gaps = 26/283 (9%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ L AIDEAHCVS+WGHDFRP YR L L P VP LA+TATA DI L +
Sbjct: 165 RVGLFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPQVPRLALTATADNHTRSDILAQLGI 224
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +I GFDRPN+ A ++ + R+L + G IIY PT+ E++ +
Sbjct: 225 PDEGLIVAGFDRPNIRYAIRPRE----SVGRQLKAVVEENPGPGIIYAPTRARVEQLAES 280
Query: 251 LSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+R+ G + PYHA + + R FV V+VAT AFGMGIDKPDVR V H G P
Sbjct: 281 LARDTGRRVLPYHAGLPPEVRARNQAAFVASEDMVMVATVAFGMGIDKPDVRFVAHAGIP 340
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH----SKTMMK 365
K + YYQE GRAGRDG SV F+ DF + SEI+ H + +
Sbjct: 341 KSIEGYYQETGRAGRDGDPSVAIMFWGADDFARARQRL------SEIEPHRQQSERQRLD 394
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E CRR LL HF + P C CDNC
Sbjct: 395 SLAGLVETAECRRAVLLRHF---------GETPAQTCGNCDNC 428
>gi|229524849|ref|ZP_04414254.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis
VL426]
gi|229338430|gb|EEO03447.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis
VL426]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|261213176|ref|ZP_05927459.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
gi|260837594|gb|EEX64288.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P++P++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNNIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|161582034|ref|NP_229853.2| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|379740087|ref|YP_005332056.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|417811271|ref|ZP_12457937.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|417815025|ref|ZP_12461666.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|417822345|ref|ZP_12468945.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|418330899|ref|ZP_12941859.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|418335866|ref|ZP_12944769.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|418342438|ref|ZP_12949250.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|418347611|ref|ZP_12952349.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|418353167|ref|ZP_12955894.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|419824659|ref|ZP_14348170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|421315437|ref|ZP_15766011.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|421318988|ref|ZP_15769550.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|421323026|ref|ZP_15773559.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|421326494|ref|ZP_15777013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|421330426|ref|ZP_15780911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|421334020|ref|ZP_15784493.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|421337925|ref|ZP_15788367.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|421345358|ref|ZP_15795746.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|421350031|ref|ZP_15800399.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|422890228|ref|ZP_16932668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|422901023|ref|ZP_16936417.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|422905194|ref|ZP_16940063.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|422911938|ref|ZP_16946476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|422921444|ref|ZP_16954674.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|422924406|ref|ZP_16957463.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|423143466|ref|ZP_17131092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|423148448|ref|ZP_17135818.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|423152234|ref|ZP_17139456.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|423155026|ref|ZP_17142169.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|423158891|ref|ZP_17145869.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|423163555|ref|ZP_17150362.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|423729565|ref|ZP_17702898.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|423745963|ref|ZP_17711086.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|423890179|ref|ZP_17725115.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|423924715|ref|ZP_17729728.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|424000739|ref|ZP_17743841.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|424004900|ref|ZP_17747897.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|424022697|ref|ZP_17762372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|424025715|ref|ZP_17765344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|424585089|ref|ZP_18024695.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|424593717|ref|ZP_18033068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|424597647|ref|ZP_18036858.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|424600419|ref|ZP_18039587.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|424605327|ref|ZP_18044303.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|424609045|ref|ZP_18047916.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|424611960|ref|ZP_18050779.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|424615844|ref|ZP_18054548.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|424620598|ref|ZP_18059135.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|424643415|ref|ZP_18081182.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|424651343|ref|ZP_18088878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|424655296|ref|ZP_18092607.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|443502247|ref|ZP_21069249.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443506147|ref|ZP_21072955.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443509985|ref|ZP_21076668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443513827|ref|ZP_21080381.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443517631|ref|ZP_21084066.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443522220|ref|ZP_21088479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443529152|ref|ZP_21095173.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443533890|ref|ZP_21099822.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443540108|ref|ZP_21105959.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
gi|340045414|gb|EGR06357.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|340045971|gb|EGR06907.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|340049588|gb|EGR10502.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|341626483|gb|EGS51872.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|341628175|gb|EGS53450.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|341628480|gb|EGS53726.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|341641806|gb|EGS66325.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|341648893|gb|EGS72908.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|341649090|gb|EGS73091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|356422714|gb|EHH76185.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|356423432|gb|EHH76883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|356427543|gb|EHH80791.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|356434248|gb|EHH87429.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|356435779|gb|EHH88928.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|356438558|gb|EHH91573.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|356444285|gb|EHH97096.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|356448332|gb|EHI01104.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|356451141|gb|EHI03843.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|356455360|gb|EHI08003.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|356456752|gb|EHI09337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|378793597|gb|AFC57068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|395922926|gb|EJH33739.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|395924346|gb|EJH35149.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|395926264|gb|EJH37052.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|395934825|gb|EJH45562.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|395936113|gb|EJH46842.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|395938083|gb|EJH48781.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|395947099|gb|EJH57756.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|395948728|gb|EJH59366.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|395955138|gb|EJH65741.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|395964752|gb|EJH74949.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|395964962|gb|EJH75150.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|395967722|gb|EJH77772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|395976765|gb|EJH86206.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|395979404|gb|EJH88755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|395979993|gb|EJH89302.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|408011183|gb|EKG49013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|408018033|gb|EKG55503.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|408038249|gb|EKG74601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|408045701|gb|EKG81507.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|408047549|gb|EKG83162.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|408058109|gb|EKG92929.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|408612488|gb|EKK85827.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|408628389|gb|EKL01142.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|408644451|gb|EKL16136.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|408659856|gb|EKL30889.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|408660756|gb|EKL31758.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|408850061|gb|EKL90047.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|408850390|gb|EKL90354.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|408875954|gb|EKM15091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|408882282|gb|EKM21122.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|443433407|gb|ELS75915.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443437237|gb|ELS83336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443441070|gb|ELS90740.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443444882|gb|ELS98141.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443448736|gb|ELT05353.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443451781|gb|ELT12026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443459995|gb|ELT27385.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443462939|gb|ELT33958.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443464395|gb|ELT39058.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
Length = 611
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|410670594|ref|YP_006922965.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
gi|409169722|gb|AFV23597.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
Length = 705
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 153/281 (54%), Gaps = 20/281 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ L AIDE+HC+S+WGHDFRP YR LS L+ P VPI+A+TATATP V +D L L
Sbjct: 127 KVSLFAIDESHCISEWGHDFRPEYRKLSMLKKKFPKVPIIALTATATPKVREDTLNQLGL 186
Query: 191 RDPNIINTGFDRPNLYLAASVKQ---DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+P F+R NL K+ D I+ LR+ N+ +G IIYC ++ + V
Sbjct: 187 TNPKTYIASFNRSNLLYEIRPKKETYDQILQYLRR-----NKGKGG-IIYCQSRKNVDTV 240
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + G PYHA +S QR F+KD ++VAT AFGMGIDKP+VR VIHY
Sbjct: 241 TAKLRKAGFNALPYHAGLSDTQRGRNQEAFIKDKADIIVATIAFGMGIDKPNVRFVIHYD 300
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK+L YYQE GR GRDGL C F+ D + F E ++ + ++ +
Sbjct: 301 LPKNLEGYYQETGRGGRDGLECECILFFSHGDRYRIEY-FVKQKGRKEERDIALKQLQDM 359
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
Y TCRRK LL++F ++ D C CD C
Sbjct: 360 VNYCVSTTCRRKALLSYFG--------EELEEDNCGGCDAC 392
>gi|424658095|ref|ZP_18095363.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
gi|408056663|gb|EKG91539.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
Length = 611
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 157/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPQQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDTDERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|302337379|ref|YP_003802585.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
gi|301634564|gb|ADK79991.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
Length = 601
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 145/254 (57%), Gaps = 4/254 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ L A+DEAHC+S+WGHDFRP Y L++LR P VPI A TATAT V +DI L L
Sbjct: 131 VSLFAVDEAHCLSEWGHDFRPDYLALAQLRTAFPTVPIAAFTATATVRVQEDIIRLLRLE 190
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
DP I+ F+R L+ K + + + + +Q S I+Y ++ +K D L
Sbjct: 191 DPFILRASFNRKELFYQVLPKTEVLSQIAQYIGAHPDQ---SGIVYRLSRKDTDKTVDYL 247
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ GI+ PYHA + +R F D ++V+VAT AFGMGIDK ++R VIH PK
Sbjct: 248 GKLGIRALPYHAGMDKDERARNQERFNNDDVQVIVATTAFGMGIDKNNIRYVIHGDLPKS 307
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQE GRAGRDGL S C F+ TAD + N F + D Q S+ + R+ ++
Sbjct: 308 MEGYYQETGRAGRDGLESQCILFFGTADIARLNY-FIRQIEDPAEQRRSRENLDRMARFA 366
Query: 372 ELRTCRRKYLLNHF 385
+ CRRK +L +F
Sbjct: 367 SVNVCRRKQILEYF 380
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 155/282 (54%), Gaps = 7/282 (2%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP Y+ L++LR P VPI+A+TATATP V DI L +R P
Sbjct: 593 IDEAHCVSQWGHDFRPDYKRLNKLRELFPTVPIMALTATATPRVRADIVKQLKIRSPIWF 652
Query: 197 NTGFDRPNL-YLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVLSRN 254
F+R NL Y K + D L + +F G S IIYC ++ CEKV LS
Sbjct: 653 IQSFNRSNLKYSIYPKKPSKVTQDCINL--IQARFAGESGIIYCLSRNECEKVAAELSSA 710
Query: 255 GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSA 314
GI + YHA + R +V+D KVV AT AFGMGIDKPDVR VIH+ PK +
Sbjct: 711 GISAKAYHAGLESNSRTYTQQAWVRDEYKVVCATIAFGMGIDKPDVRFVIHHSLPKSIEG 770
Query: 315 YYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQ-PNLNDSEIQEHSKTMMKRVEKYLEL 373
+YQE GRAGRDG + C FY D T+ + + N N I+ H + + + V+ Y E
Sbjct: 771 FYQESGRAGRDGNIAHCILFYSYQDMTRLRKVMERENDNFEAIRVHIENLQRMVQ-YCEN 829
Query: 374 RT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
T CRR LL + ++ CDNC + L++
Sbjct: 830 ETDCRRSQLLEYLGEKVISYDLCSGIVSTACDNCANKIKLKI 871
>gi|254291619|ref|ZP_04962408.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
gi|150422476|gb|EDN14434.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLEEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|429888125|ref|ZP_19369618.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
gi|429224784|gb|EKY31102.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|412992354|emb|CCO20067.1| predicted protein [Bathycoccus prasinos]
Length = 1028
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 164/308 (53%), Gaps = 34/308 (11%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L + +I LIAIDEAHC+SQWGHDFR SY+ L+ LR LP +PI+A+TATA V +DI
Sbjct: 253 LKAMNKIGLIAIDEAHCISQWGHDFRVSYKKLAVLRDQLPGIPIMALTATAVKHVREDIS 312
Query: 186 TSLMLRDPNIINTGFDRPNLYL---------------------AASVKQDDIMADLRKL- 223
+L L +P I DRPNL + AAS+++ R L
Sbjct: 313 KTLKLSNPYIATNSVDRPNLRIQCHRKVDFSSDLNYIVSQITAAASIQEKQQHQQKRALP 372
Query: 224 TNFENQFEGSTIIYCPT-KVICEKVCDVLSRNGIQNRP-YHAHISLKQRKEIHGLFVKDL 281
+ S+IIYC T K + + + R G++N YH ++ + R + H F+
Sbjct: 373 ASLAKPKYDSSIIYCATIKEVVQLTGALQHRIGVENVAMYHGSMTPQDRHDAHMRFLSSE 432
Query: 282 IKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT 341
KVVVAT AFGMGIDK DVR VIH GAPK + YYQ+IGRAGRDG++S + DF+
Sbjct: 433 CKVVVATTAFGMGIDKADVRTVIHMGAPKTMEEYYQQIGRAGRDGIASNVSMLFSDNDFS 492
Query: 342 K-NNMIFQPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPD 400
K + + L +Q + K + +E CRR +L HF+ E+ +
Sbjct: 493 KFSGDFYTKGLTKESLQTQLNSTEKLKQYAIEREKCRRAMILEHFE-------ETPLFGS 545
Query: 401 KC--CDNC 406
+C CDNC
Sbjct: 546 QCGTCDNC 553
>gi|384423525|ref|YP_005632883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
gi|327483078|gb|AEA77485.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|424589454|ref|ZP_18028911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
gi|408037483|gb|EKG73878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
Length = 611
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 138 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 253
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 254 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 373
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 374 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|385831289|ref|YP_005869102.1| ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
CV56]
gi|326407297|gb|ADZ64368.1| ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
CV56]
Length = 592
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 157/263 (59%), Gaps = 6/263 (2%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDD 183
FL ++P I L+AIDEAHC+SQWGHDFRPSY + LP P +LA+TATATP V DD
Sbjct: 124 FLQKLP-IDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVADD 182
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEGSTIIYCPTKV 242
I L + + I TGF R NL VK D L+ L N E+ E + IIY T+
Sbjct: 183 IQKLLSISPSHTIKTGFLRENLRFEV-VKGMDKRTFLKNYLKNQES--EAAGIIYASTRK 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++C+ L+ N ++ YHA +S ++R+ LF+ D + ++VAT AFGMGI+KP+VR
Sbjct: 240 EVEEICEWLNHNHFKSVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY P + +YYQE GRAGRDGL S + D N + + + D +EH
Sbjct: 300 VIHYALPATIESYYQEAGRAGRDGLESDANLLFSPNDLRIRNFLIEQSEGDEAHKEHEYE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++++ Y TC ++Y+L +F
Sbjct: 360 KLRQMQAYTSSETCLQRYILQYF 382
>gi|448747210|ref|ZP_21728871.1| DNA helicase, ATP-dependent, RecQ type, bacterial [Halomonas
titanicae BH1]
gi|445565122|gb|ELY21234.1| DNA helicase, ATP-dependent, RecQ type, bacterial [Halomonas
titanicae BH1]
Length = 626
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 162/296 (54%), Gaps = 18/296 (6%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL P + +L RI L AIDEAHCVSQWGHDFRP YR LS+L P VP +A+TA
Sbjct: 135 RLATPRMQMLL--EQTRIALFAIDEAHCVSQWGHDFRPEYRQLSQLHQRFPLVPRIALTA 192
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TA DI L L++ + N+GFDRPN+ + Q + L + + E +
Sbjct: 193 TADVPTRGDIMEHLQLQEAALYNSGFDRPNIRYHIAENQGNAKEQLLRFIREHHDGE-AG 251
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
I+YC ++ E+ L R G+ PYHA + +QR+ F+++ VVVAT AFGMG
Sbjct: 252 IVYCLSRRKVEETAAWLERQGLTALPYHAGLPPEQRQHHQTRFLREDGVVVVATIAFGMG 311
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
IDKPDVR V H PK + AYYQE GRAGRDGL + + + D + Q DS
Sbjct: 312 IDKPDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAFGLQDVITLRQMQQ----DS 367
Query: 355 EIQEHSKTM-MKRVEKYL---ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+H K + ++++ L E+ +CRR+ LL++F G + P CDNC
Sbjct: 368 SAADHQKRIEQQKLDAMLGLCEIISCRRQALLHYF-GDHLDA------PCGNCDNC 416
>gi|423668466|ref|ZP_17643495.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VDM034]
gi|423675407|ref|ZP_17650346.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VDM062]
gi|401301670|gb|EJS07257.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VDM034]
gi|401308431|gb|EJS13826.1| ATP-dependent DNA helicase RecQ [Bacillus cereus VDM062]
Length = 705
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 167/300 (55%), Gaps = 22/300 (7%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V +DIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVREDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D I V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLGKAGVSVSKYHAGMSDHDRNEQQELFLRDEISVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSECILLYYSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
Y C + ++L +F + P + C C NC + E V R +MV+
Sbjct: 365 TDYCHTEQCLQSFILQYF---------GEEPKEDCGRCGNCTDDR--ESIDVTRESQMVL 413
>gi|121587570|ref|ZP_01677336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121728001|ref|ZP_01681040.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|153800796|ref|ZP_01955382.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|153818546|ref|ZP_01971213.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|153821590|ref|ZP_01974257.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|153825932|ref|ZP_01978599.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227080417|ref|YP_002808968.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229507002|ref|ZP_04396510.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229509372|ref|ZP_04398855.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229512489|ref|ZP_04401961.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229516319|ref|ZP_04405767.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229606510|ref|YP_002877158.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254851325|ref|ZP_05240675.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255744009|ref|ZP_05417963.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262153632|ref|ZP_06028759.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|360036832|ref|YP_004938595.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str.
2010EL-1786]
gi|440712130|ref|ZP_20892755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|449054605|ref|ZP_21733273.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba
G4222]
gi|9654602|gb|AAF93372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548208|gb|EAX58278.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121629704|gb|EAX62123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|124123627|gb|EAY42370.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|126510885|gb|EAZ73479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|126520877|gb|EAZ78100.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|149740340|gb|EDM54476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227008305|gb|ACP04517.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229346745|gb|EEO11715.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229350488|gb|EEO15436.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229353687|gb|EEO18624.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229356107|gb|EEO21026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229369165|gb|ACQ59588.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254847030|gb|EET25444.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255738274|gb|EET93665.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262030573|gb|EEY49210.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|356647986|gb|AET28041.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str.
2010EL-1786]
gi|439972140|gb|ELP48437.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|448265751|gb|EMB02984.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba
G4222]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|153216100|ref|ZP_01950274.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
gi|124114476|gb|EAY33296.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
Length = 620
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|384180700|ref|YP_005566462.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324326784|gb|ADY22044.1| ATP-dependent DNA helicase RecQ [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 705
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 152/258 (58%), Gaps = 9/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLM 189
+I +IAIDEAHC+SQWGHDFRPSY + + LP+ P +LA+TATATP V DDIC +L
Sbjct: 131 KIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQVRDDICNTLG 190
Query: 190 LRDPNIINTGFDRPNLYLAASVKQD--DIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+ N I T F+R NL + QD +AD + +NQ E S IIY T+ + +++
Sbjct: 191 INQENTIMTTFERENLSFSVIKGQDRNAYLADYIR----QNQKE-SGIIYAATRKVVDQL 245
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
+ L + G+ YHA +S R E LF++D + V+VAT AFGMGIDK ++R VIHY
Sbjct: 246 YEDLMKAGVSVSKYHAGMSDNDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRYVIHYQ 305
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
PK++ +YYQE GRAGRDGL S C Y + D + + +S + ++ +
Sbjct: 306 LPKNMESYYQEAGRAGRDGLDSACILLYSSQDVQVQRFLIDQSTGESRFSNELEK-LQNM 364
Query: 368 EKYLELRTCRRKYLLNHF 385
Y C + ++L +F
Sbjct: 365 TDYCHTEQCLQSFILQYF 382
>gi|317484346|ref|ZP_07943267.1| ATP-dependent DNA helicase RecQ [Bilophila wadsworthia 3_1_6]
gi|316924424|gb|EFV45589.1| ATP-dependent DNA helicase RecQ [Bilophila wadsworthia 3_1_6]
Length = 617
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 140/254 (55%), Gaps = 4/254 (1%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ A+DEAHC+SQWGHDFRP Y LS L P P+ A TATATP V DI + L LR
Sbjct: 148 VSFFAVDEAHCISQWGHDFRPDYLALSGLVERFPQCPVAAFTATATPEVERDILSRLGLR 207
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+P +I FDRPNL+ K++ L L E + S I+Y T+ E+ L
Sbjct: 208 EPRLIRASFDRPNLFYHVLPKEEPHAQLLSFLGGHEGE---SGIVYRSTRRKVEETAAFL 264
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ G++ YHA + +R + F +D VVVAT AFGMGIDKPDVR V H PK+
Sbjct: 265 QKKGVKAEAYHAGLPDAERMRVQEAFRRDECPVVVATVAFGMGIDKPDVRFVAHLDLPKN 324
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ YYQE GRAGRDG + C Y AD + + F D E + ++ + +Y
Sbjct: 325 VEGYYQETGRAGRDGDPAHCLLLYSAADMAQ-LLYFARQTEDEEQRSIAEKHAYAMLEYA 383
Query: 372 ELRTCRRKYLLNHF 385
E CRRK LL++F
Sbjct: 384 ERNQCRRKALLSYF 397
>gi|260770707|ref|ZP_05879637.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
gi|260614288|gb|EEX39477.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
Length = 611
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 154/277 (55%), Gaps = 18/277 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ +IA+DEAHC+SQWGHDFRP Y L +L+ P VPI+A+TATA DI + L L
Sbjct: 143 LAMIAVDEAHCISQWGHDFRPEYAALGQLKQQFPQVPIMALTATADDATRSDILSRLNLT 202
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
DP++ FDRPN+ K + +R L + Q IIYC ++ E V + L
Sbjct: 203 DPHVYLGSFDRPNIRYTLMEKHKPVSQVIRYL---DTQKGHCGIIYCGSRKKVEMVTEKL 259
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
N I+ YHA + +R + F +D I++VVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 260 CNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFDIPRN 319
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + Y AD + + + + + +++ H T M
Sbjct: 320 IESYYQETGRAGRDGLPAEAVMLYDPADIAWLRRMLDEKSDGPQKQVETHKLTAMS---N 376
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR+ LLN+F DK C NC
Sbjct: 377 FAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|392309341|ref|ZP_10271875.1| ATP-dependent DNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 603
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 187/349 (53%), Gaps = 37/349 (10%)
Query: 64 QVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRL----PLP 119
Q + ++ E++ N+ +PR ++ H + Q HD +++L P
Sbjct: 84 QALGVSAEFINNS------VPR------EQQHAIYQRVHD--------GDVKLLYVAPEK 123
Query: 120 DVPILFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATAT 177
+ F+ R+ + L AIDEAHCVS WGHDFRP Y LSEL+ P +P++A+TATA
Sbjct: 124 ILQYEFIERLHHLPVSLFAIDEAHCVSHWGHDFRPHYCRLSELKQHFPAIPMMALTATAD 183
Query: 178 PVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIY 237
DI L L++P I FDRPN+ K + +R L +NQ S IIY
Sbjct: 184 TATRYDIVNQLSLQNPYIHTGSFDRPNIRYTIEEKFKPLSQLMRYLKEQQNQ---SGIIY 240
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
C ++ +++ + L+ G YHA +S +QR+ + F +D I +VVAT AFGMGI+K
Sbjct: 241 CTSRKRVDEISEKLADAGFNAAAYHAGMSNEQRQFVQSAFARDDIHIVVATVAFGMGINK 300
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
P+VR V+HY PK + AYYQE GRAGRDGL++ ++ AD + F+ ++ D + +
Sbjct: 301 PNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVKRFFE-DIEDEQRR 359
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR+ LLN+F +E Q P CD C
Sbjct: 360 RVEEQRFNAMASFAEAQTCRRQILLNYF-------SEYQREPCGNCDIC 401
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 160/296 (54%), Gaps = 12/296 (4%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDE HCVSQWGHDFRP Y+ L LR P VP +A+TATATP V DI L + +P
Sbjct: 647 IDEVHCVSQWGHDFRPDYKRLRCLRDNYPKVPTMALTATATPRVRTDILHQLGMTNPKWF 706
Query: 197 NTGFDRPNLYLAASVKQ-----DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ F+RPNL + K+ D+I+A + +T F+N I+YC ++ C+ +
Sbjct: 707 MSSFNRPNLRYSIIAKKGKNCSDEIVAMI--MTKFKN---ACGIVYCLSRKDCDDYAAQM 761
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+NGI+ YHA +S QR G ++ D I+V+ AT AFGMGIDKP+VR VIH PK
Sbjct: 762 KKNGIKALSYHAGLSDVQRSNCQGKWISDEIRVICATIAFGMGIDKPNVRFVIHAALPKS 821
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ YYQE GRAGRDG ++ C FY +D + M+ N + I H + K V
Sbjct: 822 IEGYYQESGRAGRDGETADCILFYNYSDMHRIRKMLELDNPSPQVINTHMDNLFKMVAFC 881
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
CRR LN+F G + + CDNCR + + + V + ++E
Sbjct: 882 ENSTDCRRSLQLNYF-GEIFDRQQCIMNKITACDNCRCKDEITMLDVTEDAKKIME 936
>gi|312897561|ref|ZP_07756981.1| ATP-dependent DNA helicase RecQ [Megasphaera micronuciformis F0359]
gi|310621413|gb|EFQ04953.1| ATP-dependent DNA helicase RecQ [Megasphaera micronuciformis F0359]
Length = 610
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 156/275 (56%), Gaps = 17/275 (6%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLMLRDP 193
+ +DEAHCVSQWGHDFRP YR + + LP P++ A TATAT V D+ L L++P
Sbjct: 137 VIVDEAHCVSQWGHDFRPGYRLIKDWIESLPQRPVVGAFTATATEYVKQDMLNLLGLKNP 196
Query: 194 NIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
++ GFDRPNLY + ++ D + ++ + + S IIY T+ +KV D+L
Sbjct: 197 LVLVGGFDRPNLYFRVIKTARKTDFL-----ISYLDEHKKESGIIYAATRKETDKVYDML 251
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+NG + YHA ++ ++R+ + F D I+++VAT AFGMGIDK +VR VIH+ PK+
Sbjct: 252 RKNGFKVGRYHAGLTDEERRRVQEDFTYDRIELIVATNAFGMGIDKSNVRFVIHWQMPKN 311
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYL 371
+ +YYQE GRAGRDG C + D + + D E +++ +M R+ Y
Sbjct: 312 MESYYQEAGRAGRDGAPGECILLFTRGDIMVQKFLIDVSSTDEEQKKNDTVLMNRMVDYC 371
Query: 372 ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +C R+ +L +F G +V E C NC
Sbjct: 372 EASSCLRRAILEYF-GETVKYEE--------CGNC 397
>gi|388853955|emb|CCF52453.1| related to SGS1-DNA helicase [Ustilago hordei]
Length = 1290
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 160/289 (55%), Gaps = 16/289 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R +I +DEAHCVSQWGHDFRP Y L ELRL PDVPI+A+TATA VI D+
Sbjct: 539 LYRQKKIARFIVDEAHCVSQWGHDFRPHYTELGELRLSYPDVPIMALTATANARVIKDVK 598
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGS-TIIYCPTKVI 243
L +++ I+ F+RPNL K + + ++++ +G IIYC ++
Sbjct: 599 ECLRMKNVEHISQSFNRPNLEYQVRKKPKTNVKAMEEISSLILTSHKGQCGIIYCFSRES 658
Query: 244 CEKVC-DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
CE V D+ ++ GI YHA +S R + + K+ +V+VAT AFGMGIDKPDVR
Sbjct: 659 CETVAHDLSTQYGISAHHYHAKLSADDRAMVQQRWQKNEFQVIVATIAFGMGIDKPDVRF 718
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSK 361
VIH+ PK L YYQE GRAGRDG SVC +Y D +K +MI + E ++ +
Sbjct: 719 VIHHSVPKSLEGYYQETGRAGRDGKQSVCILYYSFGDISKMRSMIEKEEGKTQEAKDRAL 778
Query: 362 TMMKRVEKYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNC 406
+ ++ ++ + CRR +L +F P+ C CDNC
Sbjct: 779 ESLDQISRFCKNEIDCRRVQVLRYFG--------EDFSPEGCASTCDNC 819
>gi|433772623|ref|YP_007303090.1| ATP-dependent DNA helicase RecQ [Mesorhizobium australicum WSM2073]
gi|433664638|gb|AGB43714.1| ATP-dependent DNA helicase RecQ [Mesorhizobium australicum WSM2073]
Length = 611
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 153/295 (51%), Gaps = 21/295 (7%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LSR+ + LIAIDEAHC+SQWG FRP Y LS LR +VPI+AVTATA DI
Sbjct: 136 LSRL-HVSLIAIDEAHCISQWGPAFRPEYEDLSRLRGIFANVPIIAVTATADESTRTDIA 194
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVIC 244
L + GFDRPN+ LA + KQD R+L F + G S IIYC ++
Sbjct: 195 ARLFAEQVETLVLGFDRPNIKLAIAPKQDSK----RQLLGFIERHAGKSGIIYCLSRKKT 250
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E++ L RNG+ YHA +S + R+ F+ V+VAT AFGMGIDKPDV V
Sbjct: 251 EEMAAFLKRNGVTALAYHAGMSKEAREANQNAFMTLSGVVMVATIAFGMGIDKPDVAFVF 310
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMM 364
H P L AYYQEIGRAGRDG + + Y D + SE + S +
Sbjct: 311 HTDMPGSLEAYYQEIGRAGRDGREAEAHMLYGLGDIRMRRLFIDDEDASSEHKRRSHRRL 370
Query: 365 KRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPR 419
+ Y E CRR+ LL +F E+Q + CDNC L+Q PR
Sbjct: 371 DTLIGYCETAQCRRQVLLGYFG------EEAQACGN--CDNC-------LDQAPR 410
>gi|330752412|emb|CBL87363.1| ATP-dependent DNA helicase RecQ [uncultured Flavobacteriia
bacterium]
Length = 739
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 155/265 (58%), Gaps = 8/265 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVI 181
I FL ++ AIDEAHC+S+WGHDFRP YR L ++ + D + I+A+TATATP V
Sbjct: 139 ITFLKN-TKVSFFAIDEAHCISEWGHDFRPEYRNLRQVVKKIGDNISIIALTATATPKVQ 197
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
DDI +L + +P I F+RPNL+ K + D+ ++ ++ S IIYC ++
Sbjct: 198 DDILKNLKMVNPEIFKASFNRPNLFYEVRQKTSKVEYDI--VSFIKSNETKSGIIYCLSR 255
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E++ L N I+ PYHA + KQR + F+ + +V+VAT AFGMGIDKPDVR
Sbjct: 256 KKVEELSQFLQVNEIRALPYHAGLDSKQRVKNQDSFLNEDCEVIVATIAFGMGIDKPDVR 315
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHS 360
VIH+ PK + +YYQE GRAGRDG C FY D K I L++ E+
Sbjct: 316 FVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYDDIEKLEKFISGKPLSEKEV---G 372
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHF 385
++++ + Y E RRK++L++F
Sbjct: 373 QSLINEIIAYAETSGSRRKFILHYF 397
>gi|323307639|gb|EGA60904.1| Sgs1p [Saccharomyces cerevisiae FostersO]
Length = 1396
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 164/283 (57%), Gaps = 12/283 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
Y + T CRRK +L++F +S++ K CDNCR++
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRNS 1075
>gi|294495880|ref|YP_003542373.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
gi|292666879|gb|ADE36728.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
Length = 599
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 163/293 (55%), Gaps = 18/293 (6%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL +P + L+++ + L A+DEAHC+SQWGHDFRP YR L LR P+VP++A+TA
Sbjct: 113 RLAMPST-LKLLAKV-NVNLFAVDEAHCISQWGHDFRPEYRKLGALRSGFPNVPLIALTA 170
Query: 175 TATPVVIDDICTSL-MLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS 233
TATP V DI L M+R + + F+R NLY ++ AD + + + E
Sbjct: 171 TATPAVARDITKQLNMVRSEKYVAS-FNRSNLYYEVKSGEN---ADQQITSYLRSHPESC 226
Query: 234 TIIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGM 293
IIYC T+ E + L + G+ YHA +S + R F+ I+VVVAT AFGM
Sbjct: 227 GIIYCQTRKSVEGLAGRLKKLGVNAAFYHAGMSDELRHRAQEKFLDGTIRVVVATVAFGM 286
Query: 294 GIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLND 353
GIDK +VR V+HY P DL +YYQ+ GR GRDG C F+K D+ K F ++
Sbjct: 287 GIDKSNVRFVMHYDLPADLESYYQQTGRGGRDGQPCDCILFFKRGDWYKQQY-FIEQMSS 345
Query: 354 SEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ +E + + ++ + Y E TCRRK LL +F S AES CD C
Sbjct: 346 KKEREIALSKLRHMMDYCESVTCRRKILLEYFGES----AESD------CDYC 388
>gi|258620546|ref|ZP_05715583.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
gi|258587061|gb|EEW11773.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
Length = 620
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P++P++A+TATA DI
Sbjct: 147 LSNLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|406671350|ref|ZP_11078589.1| ATP-dependent DNA helicase RecQ [Facklamia hominis CCUG 36813]
gi|405580600|gb|EKB54659.1| ATP-dependent DNA helicase RecQ [Facklamia hominis CCUG 36813]
Length = 722
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 165/295 (55%), Gaps = 24/295 (8%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLMLRD 192
L+A+DEAHCVSQWGHDFRPSYR + + L P L A TATA+ +V DIC L LRD
Sbjct: 132 LVAVDEAHCVSQWGHDFRPSYRQIRDFVQALDHRPSLSAFTATASELVRQDICQQLDLRD 191
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLS 252
P + + FDRPN+ L+ D A L + E IIYC ++ +++ L
Sbjct: 192 PLVFISSFDRPNIQLSIQEPADKFTALKDLLPSKE-----PCIIYCSSRKGVDQLGIALQ 246
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
+ G Q YHA +S ++R++ F+ D I+++VAT AFGMGIDK DVR V+HY PKD+
Sbjct: 247 KAGYQAACYHAGLSHQERQKAQDDFLFDRIQIMVATNAFGMGIDKSDVRLVVHYNMPKDI 306
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLE 372
YYQEIGRAGRDGL+S F+ + D + + + +++K ++ + +Y
Sbjct: 307 ENYYQEIGRAGRDGLASQAVLFFASRDILTAKYFIEESQD-----QYAKDRLEAMIRYAR 361
Query: 373 LRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCRHNEMLELEQVPRGGRMVV 425
C R+YLL++F Q PD C C C ++ + R G+M++
Sbjct: 362 HSGCLRQYLLSYF---------GQEAPDHCGNCSYCLGE--FKVRDMTREGQMIL 405
>gi|392544476|ref|ZP_10291613.1| ATP-dependent DNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 607
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 157/284 (55%), Gaps = 16/284 (5%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ RI I L AIDEAHCVS WGHDFRP Y L ELR P VP++A+TATA
Sbjct: 133 FIDRISNCNISLFAIDEAHCVSHWGHDFRPHYFRLKELRQHFPSVPMMALTATADLATRK 192
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L ++ P I FDRPN+ K + +R L + Q S IIYC ++
Sbjct: 193 DIVQQLGMQAPFIYTGSFDRPNIRYTIEEKFKPLSQLIRYLKEQKGQ---SGIIYCGSRK 249
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
+ + + L G YHA + QR+ + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 250 RVDDIAEKLIDAGFNAAGYHAGLDNDQRQFVQNRFARDDIQIVVATVAFGMGINKPNVRF 309
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+HY PK + AYYQE GRAGRD L++ ++ AD + F+ ++ D + ++ +
Sbjct: 310 VVHYDIPKSVEAYYQETGRAGRDSLAAEAVMYFDPADIPRVRRFFE-DIPDEQRRKVEEQ 368
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR+ LLN+F +E Q + C NC
Sbjct: 369 RFQAMSSFAEAQTCRRQILLNYF-------SEYQ---REACGNC 402
>gi|151945893|gb|EDN64125.1| Nucleolar DNA helicase of the RecQ family involved in maintenance of
genome integrity [Saccharomyces cerevisiae YJM789]
Length = 1447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|302805332|ref|XP_002984417.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
gi|300147805|gb|EFJ14467.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
Length = 605
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 163/287 (56%), Gaps = 10/287 (3%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L R + IDEAHCVSQWGHDFRP Y+ L L+ P VP++A+TATAT V DI
Sbjct: 319 LDRHRLLARFVIDEAHCVSQWGHDFRPDYKALGILKQQFPRVPLMALTATATHSVRKDIL 378
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQ-DDIMADLRKLT--NFENQFEGSTIIYCPTKV 242
+ L + +I T FDRPNL +K D + L K+ +F Q I+YC +K
Sbjct: 379 SILRIPHATVIETSFDRPNLKYKVVIKDPKDPLEQLGKIIKDDFARQ---CGIVYCLSKN 435
Query: 243 ICEKVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
C+ VCD LS I+ YHA +S ++R + + K+ ++V+ AT AFGMGIDK DVR
Sbjct: 436 ECKDVCDYLSNKCKIKTAFYHAGLSNRERVLVQNKWQKNEVQVICATIAFGMGIDKADVR 495
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ-EHS 360
VIH K + YYQE GRAGRDGLSS C Y+ DF++ + + S+ +
Sbjct: 496 FVIHNTMSKAIEGYYQESGRAGRDGLSSTCLVLYQKKDFSRIACMLRSGYGRSKDSFKRG 555
Query: 361 KTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+++++Y E + CRRK LL +F +S++ P++ CDNC
Sbjct: 556 VEQGRKMQEYCEEKNQCRRKLLLEYFGENSMSQNGCPTGPNR-CDNC 601
>gi|419801388|ref|ZP_14326616.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|419845355|ref|ZP_14368628.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
gi|385193739|gb|EIF41095.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|386415831|gb|EIJ30351.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
Length = 618
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 158/279 (56%), Gaps = 17/279 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I IAIDEAHC+SQWGHDFRP Y L L+ P+ PI+A+TATA DI T L L
Sbjct: 141 QISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQDILTHLKL 200
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCD 249
+P+ FDRPN+ K + +LT F +G S I+YC ++ E++ +
Sbjct: 201 DNPHKYIGSFDRPNIRYTLEEK----FKPMEQLTRFVLAQKGKSGIVYCNSRSKVERIAE 256
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L G+ YHA + R+ + F +D ++VVVAT AFGMGI+K +VR V H+ P
Sbjct: 257 ILRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLP 316
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT--KNNMIFQPNLNDSEIQEHSKTMMKRV 367
+ + +YYQE GRAGRD L + FY+ AD+ + ++ +P +I++H ++ +
Sbjct: 317 RSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILLEKPETPQRQIEQHK---LEAI 373
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ E +TCRR LLN+F E + P + CD C
Sbjct: 374 GEFAESQTCRRLVLLNYF-------GEHRQTPCQNCDIC 405
>gi|333894935|ref|YP_004468810.1| ATP-dependent DNA helicase [Alteromonas sp. SN2]
gi|332994953|gb|AEF05008.1| ATP-dependent DNA helicase [Alteromonas sp. SN2]
Length = 612
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 149/283 (52%), Gaps = 23/283 (8%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTS 187
R + L AIDEAHCVS WGHDFR YR L +++ PD+P++ +TATA DI T
Sbjct: 143 RTTEVALFAIDEAHCVSHWGHDFRHDYRALGQIKARFPDIPVIGLTATADIATQSDILTQ 202
Query: 188 LMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
L L DP + FDRPN+ K ++ + Q EGS IIYC ++ + +
Sbjct: 203 LQLNDPLVYKGSFDRPNIRYRVMSK----YKAFEQVVTYVKQQEGSGIIYCNSRAKVDDL 258
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L + G + YHA + +R+ + F+ D I +VVAT AFGMGI+K +VR V+H+
Sbjct: 259 HAKLFKQGFRCAAYHAGMDADERELVQRQFLNDKIDIVVATVAFGMGINKSNVRYVVHHD 318
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIF----QPNLNDSEIQEHSKTM 363
P+ + +YYQE GRAGRDGL S + D + Q + N E+Q+ +
Sbjct: 319 VPRSVESYYQETGRAGRDGLESEAMLLFDEKDAARVRQWIEQGEQADRNAIELQKFAA-- 376
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+E + E +TCRR+ LLN+F S D C NC
Sbjct: 377 ---MEAFSEAQTCRRQVLLNYFSQFS----------DSACGNC 406
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP binding
site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|281492402|ref|YP_003354382.1| ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
KF147]
gi|281376066|gb|ADA65557.1| ATP-dependent DNA helicase RecQ [Lactococcus lactis subsp. lactis
KF147]
Length = 592
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 155/263 (58%), Gaps = 6/263 (2%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDD 183
FL ++P I L+AIDEAHC+SQWGHDFRPSY + LP P +LA+TATATP V DD
Sbjct: 124 FLQKLP-IDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVADD 182
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEGSTIIYCPTKV 242
I L + + I TGF R NL VK D L+ L N E+ E + IIY T+
Sbjct: 183 IQKLLSISPSHTIKTGFLRENLRFEV-VKGMDKRTFLKNYLKNQES--EAAGIIYASTRK 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++C+ L+ N + YHA +S ++R+ LF+ D + ++VAT AFGMGI+KP+VR
Sbjct: 240 EVEEICEWLNHNHFKAVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY P + +YYQE GRAGRDGL S + D N + + D +EH
Sbjct: 300 VIHYALPATIESYYQEAGRAGRDGLESDAILLFSPNDLRIRNFLIEQGEGDEAHKEHEYE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++++ Y TC ++Y+L +F
Sbjct: 360 KLRQMQAYTSAETCLQRYILQYF 382
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 165/287 (57%), Gaps = 20/287 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ LS + PD+P++A+TATA+ V DI +L L
Sbjct: 718 KLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDIPMIALTATASEQVRMDIIHNLQL 777
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDI---MADLRKLTNFENQFEGSTIIYCPTKVICEKV 247
+P + F+R NL+ K+ + M D+ + T F+NQ + IIYC +K CE+
Sbjct: 778 NNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIR-TKFKNQ---TGIIYCHSKNSCEQT 833
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
++ +NG++ YHA + +R ++ + D ++V+ AT AFGMGIDKPDVR V H+
Sbjct: 834 SALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFT 893
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKR 366
P+ L YYQE GRAGRDG S C +Y D + Q + N D +E +++
Sbjct: 894 VPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQ 953
Query: 367 VEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHN 409
V +Y + RT CRR+ +L++F Q P C CDNC+++
Sbjct: 954 VMQYCDNRTDCRRQLVLSYFN--------EQFDPKDCGKNCDNCKNS 992
>gi|349580478|dbj|GAA25638.1| K7_Sgs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|365763903|gb|EHN05429.1| Sgs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1314
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 164/283 (57%), Gaps = 12/283 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
Y + T CRRK +L++F +S++ K CDNCR++
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRNS 1075
>gi|269137489|ref|YP_003294189.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda EIB202]
gi|387866249|ref|YP_005697718.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda FL6-60]
gi|267983149|gb|ACY82978.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda EIB202]
gi|304557562|gb|ADM40226.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda FL6-60]
Length = 609
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 20/276 (7%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
L+A+DEAHC+SQWGHDFRP Y L +++ P +P++A+TATA DI L LRDP
Sbjct: 142 LLAVDEAHCISQWGHDFRPEYSALGQIKRRFPQMPVIALTATADDATRQDILGLLDLRDP 201
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVLS 252
+ + FDRPN+ K L +L +F ++Q S IIYC ++ E L
Sbjct: 202 LVQVSSFDRPNIRYTLIEK----FKPLDQLWHFVQSQRGKSGIIYCNSRAKVEDTAARLQ 257
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
G+ YHA + +R E+ F +D +++VVAT AFGMGI+KP+VR V+H+ P+++
Sbjct: 258 SRGLSVGAYHAGLDNGRRAEVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNI 317
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+YYQE GRAGRDGL + FY AD + + + +P EI+ H M +
Sbjct: 318 ESYYQETGRAGRDGLPAEALLFYDPADMAWLRRCLEEKPEGAQKEIERHKLNAMN---AF 374
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +TCRR LLN+F + CDNC
Sbjct: 375 AEAQTCRRLVLLNYFGEGR----------QESCDNC 400
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 695 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 754
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 755 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 811
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 812 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 871
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 872 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 931
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 932 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 968
>gi|323303418|gb|EGA57213.1| Sgs1p [Saccharomyces cerevisiae FostersB]
Length = 1423
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|341614858|ref|ZP_08701727.1| ATP-dependent DNA helicase RecQ [Citromicrobium sp. JLT1363]
Length = 610
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 148/278 (53%), Gaps = 17/278 (6%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
RI L AIDEAHCVS+WGHDFRP YR L L DVP LA+TATA DI T L +
Sbjct: 146 RISLFAIDEAHCVSEWGHDFRPDYRLLRPLMDQFADVPRLALTATADAHTRSDILTQLGI 205
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+I GFDRPN+ + D + LR+L EN G I+Y T+ E++ +
Sbjct: 206 APEGLIVAGFDRPNIRYTIRPR-DSLTQQLRRLLA-EN--PGPGIVYAQTRAATERLAES 261
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LS + R YHA + + R FV V+ AT AFGMGIDKPDVR V H G PK
Sbjct: 262 LSDGTREVRCYHAGLPPEVRAANQAAFVASENMVICATVAFGMGIDKPDVRFVAHAGLPK 321
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ +YYQE GRAGRDG S + F+ DF + M + ++ Q+ +T + +
Sbjct: 322 SIESYYQETGRAGRDGDPSAAHLFWGADDFARARMRIA-EVGEAR-QQGERTRLAALGAL 379
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+E CRR LL HF + PP+ C CDNC
Sbjct: 380 VETAGCRRAILLRHF---------GEDPPETCGNCDNC 408
>gi|323499630|ref|ZP_08104598.1| ATP-dependent DNA helicase RecQ [Vibrio sinaloensis DSM 21326]
gi|323315231|gb|EGA68274.1| ATP-dependent DNA helicase RecQ [Vibrio sinaloensis DSM 21326]
Length = 611
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 159/286 (55%), Gaps = 17/286 (5%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ ++ L IA+DEAHC+SQWGHDFRP Y L +L+ P VP++A+TATA
Sbjct: 134 FIERLEQLPLSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRK 193
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L+DP+ FDRPN+ K I +R L E Q IIYC ++
Sbjct: 194 DIMQRLQLQDPHSYLGSFDRPNIRYTLIEKHKPISQVVRFL---EGQRGQCGIIYCGSRK 250
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V + L NG++ YHA + +R + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 251 KVEMVTEKLCNNGLRAASYHAGLDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRF 310
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFT-KNNMIFQPNLN-DSEIQEHS 360
V+H+ P+++ +YYQE GRAGRDGL + Y AD + M+ + + +++ H
Sbjct: 311 VVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKDEGPQKQVEAHK 370
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F E + P CD C
Sbjct: 371 LNAMS---AFAEAQTCRRQVLLNYF-------GEYREQPCGNCDIC 406
>gi|284034978|ref|YP_003384908.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283814271|gb|ADB36109.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 707
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 161/286 (56%), Gaps = 19/286 (6%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FLS + + L AIDEAHC+S WGHDFRP Y L L+ P VP +A+TATA + DI
Sbjct: 132 FLS-LTNLSLFAIDEAHCISSWGHDFRPEYTQLHVLKEQFPTVPTIALTATADKLTRQDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVIC 244
T L + DP I F+R NL L Q+ I +R L + + + S IIYC ++
Sbjct: 191 ATRLGMNDPAIFVDSFNRKNLSLQVLPGQNRIQQIIRLL---QQKPDTSGIIYCLSRKST 247
Query: 245 EKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVI 304
E + L G YHA + R + F++D ++++ AT AFGMGIDK +VR VI
Sbjct: 248 ESLAAKLQEKGFSAAFYHAKMDPDDRSKTQEAFLRDDVRIICATIAFGMGIDKSNVRWVI 307
Query: 305 HYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTM 363
HY PK++ ++YQEIGRAGRDG ++ FY AD T +M+ + N + +Q
Sbjct: 308 HYNMPKNIESFYQEIGRAGRDGAAAQTVLFYSFADVATYKDMLAENNPANLGLQ---LAK 364
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
++R+++Y + TCRR+ LL++F S+ PD C CD CR
Sbjct: 365 LERMQQYADAHTCRRQILLSYF---------SEELPDPCGNCDVCR 401
>gi|227114714|ref|ZP_03828370.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|403060389|ref|YP_006648606.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807715|gb|AFR05353.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 608
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 153/258 (59%), Gaps = 10/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHC+SQWGHDFRP YR L +++ P +P +A+TATA +DI L L
Sbjct: 139 QIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRNDIVRLLDL 198
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
+ P I + FDRPN+ K L +L F + Q S IIYC ++ E +C
Sbjct: 199 QSPLIQISSFDRPNIRYTLVEK----FKPLDQLWMFVQGQRGKSGIIYCNSRSRVEDICA 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L G+ YHA + ++R ++ F++D ++VVVAT AFGMGI+KP+VR V+H+ P
Sbjct: 255 RLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
+++ +YYQE GRAGRDGL++ FY AD + + + +P +I+ H M
Sbjct: 315 RNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQLDIERHKLNAMG-- 372
Query: 368 EKYLELRTCRRKYLLNHF 385
+ E +TCRR LLN+F
Sbjct: 373 -AFAEAQTCRRLVLLNYF 389
>gi|262163729|ref|ZP_06031469.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
gi|262027709|gb|EEY46374.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
Length = 620
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P++P++A+TATA DI
Sbjct: 147 LSNLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|365839981|ref|ZP_09381196.1| ATP-dependent DNA helicase RecQ [Anaeroglobus geminatus F0357]
gi|364562855|gb|EHM40683.1| ATP-dependent DNA helicase RecQ [Anaeroglobus geminatus F0357]
Length = 601
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 160/293 (54%), Gaps = 14/293 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDD 183
F+ +P + ++ +DEAHCVSQWGHDFRP YR + + LP P++ A TATAT V +D
Sbjct: 124 FMRTVP-VAMVVVDEAHCVSQWGHDFRPGYRLIKDWIASLPVRPVVGAFTATATEHVKND 182
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVI 243
+ T L L P I GFDRPNLY V Q D L+ E S IIY T+
Sbjct: 183 MLTLLGLGRPAIFIGGFDRPNLYF--RVVQTQHKTDF-VLSYLAAHKEDSGIIYTATRKE 239
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
+KV L + G++ YHA ++ ++R+ F D ++V+VAT AFGMGIDK +VR V
Sbjct: 240 TDKVYTALMKAGVKAGRYHAGLTDEERQRAQENFTYDCVQVMVATNAFGMGIDKSNVRFV 299
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM 363
IHY PK++ +YYQE GRAGRDG C + D + + ++ D +Q + +
Sbjct: 300 IHYRMPKNMESYYQEAGRAGRDGAPGECILLFSRGDIMVQRFLIEVSVQDPVLQANELKL 359
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQ 416
M R+ Y E + C R+ +L++F + P CD C + + +E+
Sbjct: 360 MNRMVAYCENKGCLRRNILSYF---------GETPAWSRCDTCGNCDAETIEE 403
>gi|308802522|ref|XP_003078574.1| putative ATP-dependent DNA helicase recQ (ISS) [Ostreococcus tauri]
gi|116057027|emb|CAL51454.1| putative ATP-dependent DNA helicase recQ (ISS) [Ostreococcus tauri]
Length = 862
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 198/415 (47%), Gaps = 77/415 (18%)
Query: 45 SVTMAESQVPPD---KCCDNCRQVVYMTPEYVTNNTSFLSRIPRIVLIAIDEAHCVSQWG 101
+V + +Q+ P + + ++VY TPE +T + +FL+ + R+V A D
Sbjct: 140 AVFLGSAQMDPGADMRALNGEYEIVYATPEKLTASDAFLNGLKRMV--AED--------- 188
Query: 102 HDFRPSYRCLSELRLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELR 161
R+ LIAIDEAHC+S WGHDFRPSY L+ LR
Sbjct: 189 -----------------------------RLALIAIDEAHCISSWGHDFRPSYAQLNILR 219
Query: 162 LPLPDVPILAVTATATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLR 221
LP VPI+A+TATA V DI L LRDP + DRPNL ++ V++ D DL
Sbjct: 220 DALPSVPIMALTATAVKFVRQDIAKILRLRDPFVSENSVDRPNLRISV-VRRTDFGRDLD 278
Query: 222 KLTNFENQFEGS-TIIYCPTKVICEKVCDVLSRNGIQNR-------PYHAHISLKQRKEI 273
+ + + +I+YC T ++V V +QNR YH +S + RK
Sbjct: 279 HVVARIGKGQPRPSIVYCAT---IKEVVQVT--GALQNRLGSSFVQMYHGSLSPEDRKNA 333
Query: 274 HGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYT 333
H F+ V+VAT AFGMGIDKPDVR + H+GAPK + YYQ+IGRAGRDGL S
Sbjct: 334 HMDFLTSRSPVIVATTAFGMGIDKPDVRYICHWGAPKTMEEYYQQIGRAGRDGLLSQVDL 393
Query: 334 FYKTADFTKNNMIF---QPNLNDSEIQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSV 390
+ DFTK F E Q S +KR L+ CRR +L HF G
Sbjct: 394 LFADNDFTKYGSDFYVRDLTAAAKETQLASTNALKRYS--LDREHCRRVMILEHF-GEEA 450
Query: 391 TVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVENSEVWMSTEARPGREAFEF 445
T S+ K CDNC E++ GG EN + E RP A F
Sbjct: 451 TF--SRCSGGK-CDNC--------ERIEAGGD---ENLHRNFAKECRPLLLALRF 491
>gi|123426519|ref|XP_001307056.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121888663|gb|EAX94126.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1279
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 163/285 (57%), Gaps = 16/285 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y + ++R P+VP++A+TATAT VI+D L +
Sbjct: 690 KLTRIVVDEAHCVSHWGHDFRPDYMQIGKVRENYPEVPLMALTATATQKVIEDCYEQLCM 749
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTN--FENQFE-GSTIIYCPTKVICEKV 247
++ I + F+RPN+ K+ ++ N ++ ++ S II+C T E++
Sbjct: 750 KNVEIFHQTFNRPNINFEVHAKEGTTEGCYNQIVNWIYQKGYDNASGIIFCMTTRTTEEM 809
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L++ G++ YH + ++ RK+ ++++ I +VVAT AFGMGI+KPDVR VIH+
Sbjct: 810 SIYLNQRGLRTLHYHGKMDMEHRKDTQDRWMRNEINIVVATLAFGMGINKPDVRFVIHHS 869
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS-EIQEHSKTMMKR 366
PK + YYQE GR+GRDG + C Y +AD K I N S E+ + M+ +
Sbjct: 870 IPKSIEEYYQEAGRSGRDGKKTDCILLYSSADIDKLLYIICENTPGSQELDRNKVDMLYK 929
Query: 367 VEKY-LELRTCRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCR 407
+E+Y L + CRR LL +F Q P++C CDNCR
Sbjct: 930 MEEYCLNKKDCRRSLLLQYFG--------EQFNPEECHEMCDNCR 966
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 163/300 (54%), Gaps = 24/300 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R ++ I IDEAHCVSQWGHDFRP Y+ L ELR LP VP++A+TATAT V D+
Sbjct: 748 LNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGVPMMALTATATENVKVDVI 807
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIYCPT 240
+L + + + F+RPNL +K+ +AD K T++ N+ S I+YC +
Sbjct: 808 HNLRMEGCEVFSQSFNRPNLTYEVRIKKKGTELLASIADTIK-TSYANK---SGIVYCLS 863
Query: 241 KVICEKVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
+ CEKV L + I+ YHA + +R +I + V+VAT AFGMGIDKPD
Sbjct: 864 RKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPD 923
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIH+ PK L YYQE GRAGRDG S CY +Y D + + + + +
Sbjct: 924 VRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSKQQKNR 983
Query: 360 SKTMMKRVEKYLELRT-CRR----KYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
+ M+ V +Y E R+ CRR Y +F+ + CDNC+ + + EL
Sbjct: 984 QRQMLHNVVQYCENRSDCRRVQIFAYFNEYFRRQDCNAS---------CDNCKSDSVFEL 1034
>gi|302039343|ref|YP_003799665.1| ATP-dependent DNA helicase [Candidatus Nitrospira defluvii]
gi|300607407|emb|CBK43740.1| ATP-dependent DNA helicase [Candidatus Nitrospira defluvii]
Length = 620
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 13/290 (4%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
L L R + L+ +DEAHC+SQWGHDFRP Y + LR L + P LA+TATAT V
Sbjct: 122 FLRLLRSLWVSLLVVDEAHCISQWGHDFRPDYLNIGRLRRELENPPCLALTATATARVQA 181
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASV---KQDDIMADLRKLTNFENQFEGSTIIYCP 239
D+C L L+DP + TGF RPNL L+ + +Q+ + R + +E G+ ++YC
Sbjct: 182 DLCDRLSLQDPLRLVTGFRRPNLALSVRLCRSRQEKLAILDRAVREYET---GTILVYCA 238
Query: 240 TKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
T+ E+V L + YHA +S ++R+++H F ++++ AT AFGMGIDK D
Sbjct: 239 TRRAVEEVAACLGASQSSVGYYHAGLSDEERRKVHDEFRVGAVRILAATNAFGMGIDKSD 298
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR V+H+ P L AYYQE+GRAGRDG + C + D Q +S
Sbjct: 299 VRLVVHFDIPGSLEAYYQEVGRAGRDGRPAACLLLFHERDVATQEYFIQQASKESGSSAR 358
Query: 360 S---KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ KT+++ + +Y+ TCR+ +L++F AE + P CD C
Sbjct: 359 ADRMKTLLQDLLEYVSGPTCRQLAILDYFSDE----AERALGPCGLCDRC 404
>gi|89890375|ref|ZP_01201885.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
gi|89517290|gb|EAS19947.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
Length = 731
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 149/259 (57%), Gaps = 11/259 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPD-VPILAVTATATPVVIDDICTSLM 189
+I +A+DEAHC+S+WGHDFRP YR L ++ + + +PI+ +TATATP V +DI +L
Sbjct: 137 KISFLAVDEAHCISEWGHDFRPEYRNLRKIIDRIDERIPIIGLTATATPKVQEDILKNLQ 196
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVC 248
+ D F+RPNL+ K + AD+ T F Q EG S I+YC ++ E++
Sbjct: 197 ISDATTYQASFNRPNLFYEVRPKTGQVDADI---TRFIKQHEGKSGIVYCLSRKRVEELA 253
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
VL NGI PYHA + K R F+ + VVVAT AFGMGIDKPDVR VIH+
Sbjct: 254 QVLQVNGIDAVPYHAGLDAKTRVLHQDKFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDI 313
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMKR 366
PK + +YYQE GRAGRDG C +Y D K M +P QE +++
Sbjct: 314 PKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMAGKPIAE----QEIGHALLQE 369
Query: 367 VEKYLELRTCRRKYLLNHF 385
+ Y E RR+++L++F
Sbjct: 370 MVGYAETSMSRRQFILHYF 388
>gi|258625868|ref|ZP_05720743.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
gi|258581832|gb|EEW06706.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
Length = 620
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 158/283 (55%), Gaps = 19/283 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P++P++A+TATA DI
Sbjct: 147 LSNLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F DK C NC
Sbjct: 383 MG---AFAEAQTCRRQVLLNYFGEYR----------DKPCGNC 412
>gi|359787299|ref|ZP_09290357.1| ATP-dependent DNA helicase RecQ [Halomonas sp. GFAJ-1]
gi|359295428|gb|EHK59697.1| ATP-dependent DNA helicase RecQ [Halomonas sp. GFAJ-1]
Length = 608
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 158/295 (53%), Gaps = 16/295 (5%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL +P + +L +I L AIDEAHCVSQWGHDFRP YR LS L P VP +A+TA
Sbjct: 121 RLAMPRMQMLL--EQTQIALFAIDEAHCVSQWGHDFRPEYRQLSHLHQRFPQVPRIALTA 178
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TA DI L L++ + N+GFDRPN+ + Q + L + + E +
Sbjct: 179 TADVPTRGDIMEHLQLQNAALYNSGFDRPNIRYHIAENQGNAKEQLLRFIREHHNGE-AG 237
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
I+YC ++ E+ L R G+ PYHA + +QR+ F+++ V+VAT AFGMG
Sbjct: 238 IVYCLSRRKVEETAAWLERQGLTALPYHAGLPAEQRQHHQTRFLREDGVVIVATIAFGMG 297
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
IDKPDVR V H PK + AYYQE GRAGRDGL + + Y D + Q S
Sbjct: 298 IDKPDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVI---TLRQMQQGSS 354
Query: 355 EIQEHSKTMMKRVEKYL---ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + ++++ L E+ +CRR+ LL++F + P CDNC
Sbjct: 355 AADQQKRIEQQKLDAMLGLCEIISCRRQALLHYF-------GDHLDAPCGNCDNC 402
>gi|356532786|ref|XP_003534951.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Glycine max]
Length = 732
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 184/343 (53%), Gaps = 34/343 (9%)
Query: 125 FLSRIPRIV------LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATP 178
F++++ +I LIAIDEAHC+S WGHDFRPSYR LS LR LPDVPILA+TATA P
Sbjct: 146 FMTKLTKIYTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVP 205
Query: 179 VVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQ--DDIMADLRKLTNFENQFEGSTII 236
V D+ SL +++P ++ + F+RPN+Y K DD ADL ++ + I+
Sbjct: 206 KVQKDVVESLQMQNPLMLKSSFNRPNIYYEVRYKDLLDDAYADLS--NTLKSLGDVCAIV 263
Query: 237 YCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGID 296
YC + +C+ + LS+NGI YHA ++ K R + ++ IKVVVAT AFG
Sbjct: 264 YCLERSMCDDLSTNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFG---- 319
Query: 297 KPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI 356
DVR V H+ PK + A+YQE GRAGRD L S +Y D + I + +++
Sbjct: 320 -KDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVSKKSQ 378
Query: 357 QEHSKTMMKRVE--------KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
S+ ++ +Y E CRRK +L F G VT + K CD CRH
Sbjct: 379 SSSSQEESSKMSLIAFNLMVEYCEGSGCRRKRVLESF-GEQVTASLC----GKTCDGCRH 433
Query: 409 NEMLE--LEQVPRGGRMVVEN--SEVWM--STEARPGREAFEF 445
++ LE + + +N S V+M ST+A G + EF
Sbjct: 434 PNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAINGEQLSEF 476
>gi|313214693|emb|CBY40985.1| unnamed protein product [Oikopleura dioica]
Length = 596
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 162/285 (56%), Gaps = 14/285 (4%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
+S+IP + LIAIDEAHCVS+WGHDFR +Y LS L+ P+ P++A+T TAT + D+I
Sbjct: 211 MSKIP-VALIAIDEAHCVSEWGHDFRKAYMGLSSLKQLSPNTPVVALTGTATVNMRDEII 269
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFE-GSTIIYCPTKVIC 244
L L + FDRPN+++ VK+ M D L N + S IIYC TK +
Sbjct: 270 KCLDLSNAQTTVGSFDRPNIFI--KVKKKTTMFD--DLINSDAILPYKSIIIYCRTKQLS 325
Query: 245 EKVCDVLS--RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V L+ +N ++ YHA +S R+ I F++ KV+VAT AFGMGIDK DVR
Sbjct: 326 EDVATKLAELKNETKSTFYHAGLSTDDRESIQNEFLRGQTKVIVATIAFGMGIDKADVRR 385
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD-FTKNNMIFQPNLNDSEIQEHSK 361
VIHYG P L AYYQEIGRAGRDG SS C F+ D F + I ++ + +E
Sbjct: 386 VIHYGIPSSLEAYYQEIGRAGRDGKSSDCIVFFNEQDKFIAEHFI--KKTSNPKRKEQLI 443
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ V TCRR+++L++F + S+ CCD C
Sbjct: 444 KGFQDVMNLFSTTTCRREFILDYF---GEKIDRSRTDFHVCCDIC 485
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 158/288 (54%), Gaps = 10/288 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
R+ I IDEAHCVSQWGHDFRP Y+ L +LR P VPI+A+TATAT VI DI +L +
Sbjct: 840 RLARIVIDEAHCVSQWGHDFRPDYKALGKLRHQFPTVPIIALTATATQNVIVDIKHNLGM 899
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCD 249
+ + F+RPNL K+ +++ + L +++ G IIY ++ E+V +
Sbjct: 900 DSCQVFSQSFNRPNLTYEVRRKEKELIHKIADL--IMSKYNGQCGIIYTLSRKTSEQVAE 957
Query: 250 VL-SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L S+ I+ YHA ++ + R + + D I VVVAT AFGMGIDKPDVR VIH+
Sbjct: 958 KLRSQYNIKASHYHAQMTPEDRIRVQREWQADKIHVVVATIAFGMGIDKPDVRFVIHHSV 1017
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK L YYQE GRAGRDG S C F+ D + +E + M+ RV
Sbjct: 1018 PKSLEGYYQETGRAGRDGNPSDCILFFGYQDVATLKKMIADGEGSETQKERQRIMLNRVT 1077
Query: 369 KYLELR-TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELE 415
+ + R CRR +L +F G + + K CDNCR + E +
Sbjct: 1078 AFCDNRENCRRVEILRYF-GEVFNADDCE----KTCDNCRAGAVFEQQ 1120
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 12/282 (4%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
++ I +DEAHCVS WGHDFRP Y+ L + PD+P++A+TATA+ V DI +L L
Sbjct: 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADL--RKLTNFENQFEGSTIIYCPTKVICEKVC 248
++P + F+R NLY + K + + ++ + F+NQ + IIYC +K CE+
Sbjct: 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQ---TGIIYCHSKKSCEQTS 917
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ RNGI+ YHA + +R + + D I+V+ AT AFGMGIDKPDVR V H+
Sbjct: 918 AQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTV 977
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLN-DSEIQEHSKTMMKRV 367
P+ L YYQE GRAGRDG S C T++ D + Q + N D E +E +++V
Sbjct: 978 PRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQV 1037
Query: 368 EKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRH 408
Y + T CRRK +L++F +S++ K CDNCR+
Sbjct: 1038 MAYCDNVTDCRRKLVLSYFNED----FDSKL-CHKNCDNCRN 1074
>gi|226323999|ref|ZP_03799517.1| hypothetical protein COPCOM_01776 [Coprococcus comes ATCC 27758]
gi|225207548|gb|EEG89902.1| ATP-dependent DNA helicase RecQ [Coprococcus comes ATCC 27758]
Length = 611
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 154/264 (58%), Gaps = 14/264 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I +IA+DEAHCVSQWG DFRPSY ++E LP P++ A TATAT V +D+ LML
Sbjct: 130 ISMIAVDEAHCVSQWGQDFRPSYLKITEFVEYLPKRPVVSAFTATATKEVREDMIDILML 189
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
DP ++ TG+DRPNL+LA ++ A L F E + I+YC T+ E+ C
Sbjct: 190 EDPEVVMTGYDRPNLFLAVQFPKNKYAA----LKAFIEEHPDQCGIVYCLTRKQVEENCA 245
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
+L +G YHA ++ ++R++ F+ D +++VAT AFGMGIDK +VR V+HY P
Sbjct: 246 LLEMDGFSVTRYHAGLTDQERRDNQDDFIYDRKQIMVATNAFGMGIDKSNVRFVVHYNMP 305
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM------ 363
K+L +YYQE+GR RDG C Y D N M + N ++ E+ E ++ +
Sbjct: 306 KNLESYYQEVGRCARDGEPGECLLLYSGQDVITNQMFIENNRDNQELDELTRRIVIERDQ 365
Query: 364 --MKRVEKYLELRTCRRKYLLNHF 385
+K++ Y + C R Y+L +F
Sbjct: 366 ERLKKMTYYCFTKECLRDYILRYF 389
>gi|418070328|ref|ZP_12707603.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus R0011]
gi|423078565|ref|ZP_17067244.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus ATCC
21052]
gi|357539748|gb|EHJ23765.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus R0011]
gi|357550417|gb|EHJ32235.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus ATCC
21052]
Length = 593
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLML 190
I L AIDEAHC+SQWGHDFRPSY L+ + LP P ++A+TATATP V DIC LM+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATPRVAQDICQRLMI 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +INTGF+R NL QD+ D L + + S IIY T+ +++
Sbjct: 193 PDDGVINTGFERDNLSFKVVRDQDE---DRYLLDYLKLNVDQSGIIYASTRKEVDRIYAF 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA ++ KQR F+ D ++VAT AFGMGIDK +VR VIH PK
Sbjct: 250 LQHKQLPVAKYHAGMTEKQRAANQEDFLFDRKPIMVATNAFGMGIDKSNVRFVIHAQIPK 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
DL +YYQE GRAGRDGL S ++ D + + D Q +K +E+Y
Sbjct: 310 DLESYYQEAGRAGRDGLPSEAILLFRPQDLQVQRFFIEQSEGDEAHQRRQYEKLKVMERY 369
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C ++++LN+F ++ P C NC
Sbjct: 370 ANTDQCLQQFILNYF-------GQTGTAPCGRCSNC 398
>gi|212556507|gb|ACJ28961.1| ATP-dependent DNA helicase RecQ [Shewanella piezotolerans WP3]
Length = 607
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 156/276 (56%), Gaps = 14/276 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L AIDEAHC+SQWGHDFRP Y L LR P VPI+A+TATA DIC L +
Sbjct: 140 ISLFAIDEAHCISQWGHDFRPEYAALGRLRQQFPLVPIMALTATADNATRVDICERLTI- 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+P + T FDRPN+ + K + LR+ + +N G I+YC ++ ++V + L
Sbjct: 199 EPFSLLTSFDRPNIRYTVAEKLN-AANQLRQFIDAQNGNSG--IVYCSSRRRVDEVAERL 255
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G Q YHA + ++R ++ F+KD + +VVAT AFGMGI+K +VR V+HY PK
Sbjct: 256 RMQGHQAEAYHAGKTQEERADVQDRFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKS 315
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ AYYQE GRAGRDGL S + AD + ++I Q + E K + + +
Sbjct: 316 VEAYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHK--LNTMAAF 373
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +TCRR+ LL++F ES + P CD C
Sbjct: 374 AEAQTCRRQVLLHYFD-------ESALEPCGNCDIC 402
>gi|343501055|ref|ZP_08738938.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii ATCC 19109]
gi|418477793|ref|ZP_13046915.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342819043|gb|EGU53890.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii ATCC 19109]
gi|384574570|gb|EIF05035.1| ATP-dependent DNA helicase RecQ [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 612
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 155/284 (54%), Gaps = 13/284 (4%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ I L IA+DEAHC+SQWGHDFRP Y L +L+ P +P++A+TATA
Sbjct: 135 FIERLENISLSMIAVDEAHCISQWGHDFRPEYASLGQLKQHFPHIPVMALTATADDATRK 194
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
DI L L +P+ FDRPN+ K + +R L E Q IIYC ++
Sbjct: 195 DIMQRLQLDEPHTYLGSFDRPNIRYTLVEKHKPVSQVVRFL---EGQRGSCGIIYCGSRK 251
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E V + L NG++ YHA + +R + F +D I++VVAT AFGMGI+KP+VR
Sbjct: 252 KVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRF 311
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
V+H+ P+++ +YYQE GRAGRDGL + Y AD + + +D ++
Sbjct: 312 VVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEK-DDGPQKQVEAH 370
Query: 363 MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + + E +TCRR+ LLN+F E + P CD C
Sbjct: 371 KLNAMSAFAEAQTCRRQVLLNYF-------GEYREKPCGNCDIC 407
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 164/296 (55%), Gaps = 16/296 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R ++ I IDEAHCVSQWGHDFRP Y+ L ELR LP VP++A+TATAT V D+
Sbjct: 754 LNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGVPMMALTATATENVKVDVI 813
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIYCPT 240
+L + + + F+RPNL +K+ +AD K T++ N+ S I+YC +
Sbjct: 814 HNLKMEGCEVFSQSFNRPNLTYEVRIKKKGTELLASIADTIK-TSYANK---SGIVYCLS 869
Query: 241 KVICEKVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
+ CEKV L + I+ YHA + +R +I + V+VAT AFGMGIDKPD
Sbjct: 870 RKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPD 929
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIH+ PK L YYQE GRAGRDG S CY +Y D + + + + +
Sbjct: 930 VRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSKQQKNR 989
Query: 360 SKTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
+ M+ V +Y E R+ CRR +L +F + + CDNC+ + + EL
Sbjct: 990 QRQMLHNVVQYCENRSDCRRVQILAYF-----NEYFRRQDCNASCDNCKSDSVFEL 1040
>gi|197287158|ref|YP_002153030.1| ATP-dependent DNA helicase RecQ [Proteus mirabilis HI4320]
gi|227357149|ref|ZP_03841518.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|425070259|ref|ZP_18473373.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
gi|425074080|ref|ZP_18477185.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|194684645|emb|CAR46565.1| ATP-dependent DNA helicase [Proteus mirabilis HI4320]
gi|227162681|gb|EEI47648.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|404594320|gb|EKA94907.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|404595525|gb|EKA96065.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
Length = 609
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 148/256 (57%), Gaps = 10/256 (3%)
Query: 133 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
L+A+DEAHC+SQWGHDFRP YR + LR LPDVPI+A+TATA DI L LR
Sbjct: 141 ALLAVDEAHCISQWGHDFRPEYRGIGLLRQYLPDVPIIALTATADNTTRHDIINQLALRT 200
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVL 251
P + + FDRPN+ K L +L F Q S IIYC ++ E+ + L
Sbjct: 201 PLVHISSFDRPNIRYTLVEK----YKPLDQLWLFIRGQKGKSGIIYCNSRSKVEETAERL 256
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ G+ YHA + + R ++ F +D +++VVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 257 GKRGLSIAAYHAGMDIATRAKVQDAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + FY AD + + + +P I+ H M
Sbjct: 317 IESYYQETGRAGRDGLPAQAVLFYDPADMAWLRRCLDEKPESEQKAIESHKLNAMG---A 373
Query: 370 YLELRTCRRKYLLNHF 385
+ E +TCRR LLN+F
Sbjct: 374 FAEAQTCRRLVLLNYF 389
>gi|347536771|ref|YP_004844196.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum
FL-15]
gi|345529929|emb|CCB69959.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium branchiophilum
FL-15]
Length = 731
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 155/264 (58%), Gaps = 11/264 (4%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDI 184
FL +P + +AIDEAHC+S+WGHDFRP YR L + L DVPI+ +TATATP V +DI
Sbjct: 132 FLQTVP-LSFVAIDEAHCISEWGHDFRPEYRNLKNIIKQLSDVPIIGLTATATPKVQEDI 190
Query: 185 CTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVI 243
+L + D F+RPNL+ K +I +D+ + F Q +G S IIYC ++
Sbjct: 191 LKNLDMPDAKTFKASFNRPNLFYEVRTKTKNIESDIIR---FIKQNKGKSGIIYCLSRKK 247
Query: 244 CEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCV 303
E + +VL NGI PYHA + K R + +F+ + ++VVVAT AFGMGIDKPDVR V
Sbjct: 248 VESIAEVLKVNGISAVPYHAGLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVRFV 307
Query: 304 IHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEHSK 361
IH+ PK L +YYQE GR GRDG C +Y D K + L + QE
Sbjct: 308 IHHDIPKSLESYYQETGRGGRDGGEGHCLAYYSYKDVEK----LEKFLTGKPVAEQEIGF 363
Query: 362 TMMKRVEKYLELRTCRRKYLLNHF 385
+++ V Y E RRK+LL++F
Sbjct: 364 ALLQEVVAYAETSMSRRKFLLHYF 387
>gi|427722202|ref|YP_007069479.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
gi|427353922|gb|AFY36645.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
Length = 715
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 152/281 (54%), Gaps = 18/281 (6%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
+DEAHCVS+WGHDFRP YR L+ LR P VP A TATAT V DI T L L P+
Sbjct: 143 VDEAHCVSEWGHDFRPEYRQLARLRRNYPQVPCHAFTATATERVRQDIITQLALHTPSFH 202
Query: 197 NTGFDRPNLYL----AASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLS 252
T F+RPNLY +S D ++ RK S IIYC ++ +++ D L
Sbjct: 203 CTSFNRPNLYYEVIPKSSRSYDQVLKYTRKHRG------KSGIIYCSSRKKVDEISDRLK 256
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
+GI PYHA +S K R F++D + V+VAT AFGMGI+KPDVR V+HY P +L
Sbjct: 257 NDGINALPYHAGMSDKARASHQDQFIRDDVPVIVATIAFGMGINKPDVRFVLHYDLPGNL 316
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLE 372
YYQE GRAGRD + C Y D K + ++ E + + + K ++ Y E
Sbjct: 317 ERYYQESGRAGRDNEPADCALLYSVGDIKKAEYFIELKDDEQEKRVAYQQLQKMID-YAE 375
Query: 373 LRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLE 413
CRR L++F ES V CDNC++ + +E
Sbjct: 376 GIECRRTIQLSYF-------GESFVGNCGTCDNCKNPKPIE 409
>gi|336317637|ref|ZP_08572488.1| ATP-dependent DNA helicase RecQ [Rheinheimera sp. A13L]
gi|335877984|gb|EGM75932.1| ATP-dependent DNA helicase RecQ [Rheinheimera sp. A13L]
Length = 599
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 160/285 (56%), Gaps = 18/285 (6%)
Query: 125 FLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+SR+ + L AIDEAHC+SQWGHDFRP Y L++L+ P VP++A+TATA P
Sbjct: 123 FMSRLAEVGVSLFAIDEAHCISQWGHDFRPHYTELAQLKHYFPHVPMMALTATADPATQK 182
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L+ P I FDRPN+ K L ++ N+ + Q + S IIYC ++
Sbjct: 183 DISRQLNLQQPYISVGSFDRPNIRYTVQEK----FRPLEQVVNYLKLQEQQSGIIYCASR 238
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+++ + L+ G Q YHA ++ +QR + F KD I++++AT AFGMG++K ++R
Sbjct: 239 RKVDELTEQLAGKGFQVAAYHAGLTNEQRNSVQEAFKKDQIQLIIATVAFGMGVNKSNIR 298
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIH+ P+ + AYYQE GRAGRDG+ + AD + + + N+S E +
Sbjct: 299 FVIHFELPRTIEAYYQETGRAGRDGVPAEALMLVDPADIARMRSWIEKDENNSRT-EVAL 357
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
++ + + +TCRR LLN+F SS K C NC
Sbjct: 358 QRFNQMAAFAQAQTCRRLVLLNYFGESS----------QKPCGNC 392
>gi|24375725|ref|NP_719768.1| ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
gi|24350662|gb|AAN57212.1|AE015857_5 ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
Length = 607
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 164/286 (57%), Gaps = 18/286 (6%)
Query: 125 FLSRIPRIVL--IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
F+ R+ + L AIDEAHC+SQWGHDFRP Y L +L+ P VP++A+TATA
Sbjct: 131 FIERMQSLPLSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMMALTATADQATRQ 190
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTK 241
+IC L + +P + + FDRPN+ + K + +L F Q GS+ IIYC ++
Sbjct: 191 NICERLGI-NPFKLLSSFDRPNIRYTVAEK----LNAANQLRQFLLQQNGSSGIIYCSSR 245
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
++V + L+ G + YHA ++ ++R E+ F+KD I +VVAT AFGMGI+K +VR
Sbjct: 246 RRVDEVAERLTLQGFHAKAYHAGMTPEERGEVQDSFLKDQIDIVVATVAFGMGINKSNVR 305
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHS 360
V+HY PK + AYYQE GRAGRDGL + + + AD + ++I Q + E
Sbjct: 306 FVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQQQVEFH 365
Query: 361 KTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
K + + + E +TCRR+ LL++F ES + P CD C
Sbjct: 366 K--LNTMAAFAEAQTCRRQVLLHYFD-------ESALEPCGNCDIC 402
>gi|374587401|ref|ZP_09660493.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
gi|373876262|gb|EHQ08256.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
Length = 617
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 146/272 (53%), Gaps = 17/272 (6%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHC+S WGHDFRP YR ++ +R P LA+TATAT V DI T+L L +
Sbjct: 155 IDEAHCISDWGHDFRPEYRQIAAVRRRFPRAVCLALTATATERVRHDILTALGLDEAAQF 214
Query: 197 NTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVLSRNGI 256
GFDRPNL++ KQ+ + LR L +Q + IIYC ++ + + L + G
Sbjct: 215 VAGFDRPNLFIEVLPKQNALTQTLRFLEERRDQ---AGIIYCFSRRQVDDLAAALVQKGF 271
Query: 257 QNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLSAYY 316
RPYHA + +R F++D I+++VAT AFGMGI+KP+VR VIHY PK + YY
Sbjct: 272 SARPYHAGLGDAERAANQEAFLRDDIQIIVATIAFGMGINKPNVRFVIHYDLPKSIEGYY 331
Query: 317 QEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEI--QEHSKTMMKRVEKYLELR 374
QEIGRAGRDGL S C Y D K D + EH +++ E++
Sbjct: 332 QEIGRAGRDGLPSHCLLLYSYGDVAKLRHFIDQKEEDERLVALEHLDALVRFAEQHA--- 388
Query: 375 TCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
CRR LL +F + P CD C
Sbjct: 389 GCRRIPLLRYF---------GEEPTSTRCDRC 411
>gi|385827721|ref|YP_005865493.1| DNA helicase RecQ [Lactobacillus rhamnosus GG]
gi|259649366|dbj|BAI41528.1| DNA helicase RecQ [Lactobacillus rhamnosus GG]
Length = 593
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLML 190
I L AIDEAHC+SQWGHDFRPSY L+ + LP P ++A+TATATP V DIC LM+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATPRVAQDICQRLMI 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +INTGF+R NL QD+ D L + + S IIY T+ +++
Sbjct: 193 PDDGVINTGFERDNLSFKVVRDQDE---DRYLLDYLKLNVDQSGIIYASTRKEVDRIYAF 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA ++ KQR F+ D ++VAT AFGMGIDK +VR VIH PK
Sbjct: 250 LQHKQLPVAKYHAGMTEKQRAANQEDFLFDRKPIMVATNAFGMGIDKSNVRFVIHAQIPK 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
DL +YYQE GRAGRDGL S ++ D + + D Q +K +E+Y
Sbjct: 310 DLESYYQEAGRAGRDGLPSEAILLFRPQDLQVQRFFIEQSEGDEAHQRRQYDKLKVMERY 369
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C ++++LN+F ++ P C NC
Sbjct: 370 ANTDQCLQQFILNYF-------GQTGTAPCGRCSNC 398
>gi|258508044|ref|YP_003170795.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus GG]
gi|257147971|emb|CAR86944.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus GG]
Length = 591
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLML 190
I L AIDEAHC+SQWGHDFRPSY L+ + LP P ++A+TATATP V DIC LM+
Sbjct: 131 ISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATPRVAQDICQRLMI 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +INTGF+R NL QD+ D L + + S IIY T+ +++
Sbjct: 191 PDDGVINTGFERDNLSFKVVRDQDE---DRYLLDYLKLNVDQSGIIYASTRKEVDRIYAF 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA ++ KQR F+ D ++VAT AFGMGIDK +VR VIH PK
Sbjct: 248 LQHKQLPVAKYHAGMTEKQRAANQEDFLFDRKPIMVATNAFGMGIDKSNVRFVIHAQIPK 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
DL +YYQE GRAGRDGL S ++ D + + D Q +K +E+Y
Sbjct: 308 DLESYYQEAGRAGRDGLPSEAILLFRPQDLQVQRFFIEQSEGDEAHQRRQYDKLKVMERY 367
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C ++++LN+F ++ P C NC
Sbjct: 368 ANTDQCLQQFILNYF-------GQTGTAPCGRCSNC 396
>gi|254226334|ref|ZP_04919924.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
gi|125621139|gb|EAZ49483.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
Length = 620
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 159/283 (56%), Gaps = 16/283 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P+VP++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F E + P CD C
Sbjct: 383 MG---AFAEAQTCRRQVLLNYF-------GEYRDQPCGNCDIC 415
>gi|352106026|ref|ZP_08961137.1| ATP-dependent DNA helicase RecQ [Halomonas sp. HAL1]
gi|350598118|gb|EHA14242.1| ATP-dependent DNA helicase RecQ [Halomonas sp. HAL1]
Length = 608
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 158/295 (53%), Gaps = 16/295 (5%)
Query: 115 RLPLPDVPILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTA 174
RL P + +L +I L AIDEAHCVSQWGHDFRP YR LS L P VP +A+TA
Sbjct: 121 RLATPRMQMLLEQN--QIALFAIDEAHCVSQWGHDFRPEYRQLSHLHQRFPQVPRIALTA 178
Query: 175 TATPVVIDDICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST 234
TA DI L L++ + N+GFDRPN+ + Q + L + + E +
Sbjct: 179 TADVPTRHDIMEHLQLQEAALYNSGFDRPNIRYHIAENQGNAKEQLLRFIREHHDGE-AG 237
Query: 235 IIYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMG 294
I+YC ++ E+ L R G+ PYHA + +QR++ F+++ VVVAT AFGMG
Sbjct: 238 IVYCLSRRKVEETAAWLERQGLTALPYHAGLPAEQRQQHQTRFLREDGVVVVATIAFGMG 297
Query: 295 IDKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDS 354
IDKPDVR V H PK + AYYQE GRAGRDGL + + Y D + Q S
Sbjct: 298 IDKPDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVI---TLRQMQQGSS 354
Query: 355 EIQEHSKTMMKRVEKYL---ELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ + ++++ L E+ +CRR+ LL++F + P CDNC
Sbjct: 355 AADQQKRIEQQKLDAMLGLCEIISCRRQALLHYF-------GDHLDDPCGNCDNC 402
>gi|258539312|ref|YP_003173811.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus Lc 705]
gi|257150988|emb|CAR89960.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus Lc 705]
Length = 591
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLML 190
I L AIDEAHC+SQWGHDFRPSY L+ + LP P ++A+TATATP V DIC LM+
Sbjct: 131 ISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATPRVAQDICQRLMI 190
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +INTGF+R NL QD+ D L + + S IIY T+ +++
Sbjct: 191 PDDGVINTGFERDNLSFKVVRDQDE---DRYLLDYLKLNVDQSGIIYASTRKEVDRIYAF 247
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA ++ KQR F+ D ++VAT AFGMGIDK +VR VIH PK
Sbjct: 248 LQHKQLPVAKYHAGMTEKQRAANQEDFLFDRKPIMVATNAFGMGIDKSNVRFVIHAQIPK 307
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
DL +YYQE GRAGRDGL S ++ D + + D Q +K +E+Y
Sbjct: 308 DLESYYQEAGRAGRDGLPSEAILLFRPQDLQVQRFFIEQSEGDEAHQRRQYDKLKIMERY 367
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C ++++LN+F ++ P C NC
Sbjct: 368 ANTDQCLQQFILNYF-------GQTGTAPCGRCSNC 396
>gi|229551890|ref|ZP_04440615.1| ATP-dependent helicase [Lactobacillus rhamnosus LMS2-1]
gi|385834951|ref|YP_005872725.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus ATCC 8530]
gi|229314746|gb|EEN80719.1| ATP-dependent helicase [Lactobacillus rhamnosus LMS2-1]
gi|355394442|gb|AER63872.1| ATP-dependent DNA helicase RecQ [Lactobacillus rhamnosus ATCC 8530]
Length = 593
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLML 190
I L AIDEAHC+SQWGHDFRPSY L+ + LP P ++A+TATATP V DIC LM+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATPRVAQDICQRLMI 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +INTGF+R NL QD+ D L + + S IIY T+ +++
Sbjct: 193 PDDGVINTGFERDNLSFKVVRDQDE---DRYLLDYLKLNVDQSGIIYASTRKEVDRIYAF 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA ++ KQR F+ D ++VAT AFGMGIDK +VR VIH PK
Sbjct: 250 LQHKQLPVAKYHAGMTEKQRAANQEDFLFDRKPIMVATNAFGMGIDKSNVRFVIHAQIPK 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
DL +YYQE GRAGRDGL S ++ D + + D Q +K +E+Y
Sbjct: 310 DLESYYQEAGRAGRDGLPSEAILLFRPQDLQVQRFFIEQSEGDEAHQRRQYDKLKIMERY 369
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C ++++LN+F ++ P C NC
Sbjct: 370 ANTDQCLQQFILNYF-------GQTGTAPCGRCSNC 398
>gi|421074731|ref|ZP_15535756.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans JBW45]
gi|392527173|gb|EIW50274.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans JBW45]
Length = 707
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 162/289 (56%), Gaps = 11/289 (3%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICT 186
++ I L+AIDEAHCVSQWGHDFRPSYR + LP+ PI+ A TATAT V DI T
Sbjct: 128 KVLTISLLAIDEAHCVSQWGHDFRPSYRAVGSFIASLPNRPIIGAFTATATTDVTQDIIT 187
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
L L++P++ TGFDR NL ++ L+ +T + Q S IIY T+ +
Sbjct: 188 LLALKNPDVYMTGFDRENLSFTVIRGENKQDFTLKYITANKEQ---SGIIYAATRKEVDN 244
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ +L + G YHA + K+R+ F+ D I ++VAT AFGMGIDK +VR VIHY
Sbjct: 245 LYSLLYKKGYSVGKYHAGLPDKERQHYQEQFIYDNISIMVATNAFGMGIDKSNVRYVIHY 304
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ AYYQE GRAGRDG S C + D + + D++ + + + ++
Sbjct: 305 NMPKNMEAYYQEAGRAGRDGEPSECMLLFGAQDPLLQRYLIEQTTFDTDRKTNELSKLQT 364
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR-HNEMLEL 414
+ Y C RK++LN+F G + + E C NC+ NE+ ++
Sbjct: 365 MVDYCHTPECLRKFILNYF-GETSDITEC-----ANCSNCKDDNELTDI 407
>gi|319955579|ref|YP_004166846.1| ATP-dependent DNA helicase recq [Cellulophaga algicola DSM 14237]
gi|319424239|gb|ADV51348.1| ATP-dependent DNA helicase RecQ [Cellulophaga algicola DSM 14237]
Length = 702
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 160/276 (57%), Gaps = 20/276 (7%)
Query: 135 IAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPN 194
IAIDEAHC+S WGHDFRPSY+ L L+ +P+ PI+A+TATA DI T L +
Sbjct: 138 IAIDEAHCISSWGHDFRPSYQQLGFLKKKMPNTPIIALTATADKATRQDIVTQLNITKAE 197
Query: 195 IINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVLSR 253
T FDR N+ L +V+ D + ++ NF + + + S IIYC ++ E++ L
Sbjct: 198 QFITSFDRKNISL--TVRPAD--GRVEQILNFIDKRPKSSGIIYCLSRKTTEQLVSKLKA 253
Query: 254 NGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDLS 313
G++ YHA +S +R ++ F+ D K+V AT AFGMGIDK +VR VIHY PK++
Sbjct: 254 KGLKADAYHAGLSFDERTKVQENFIFDKTKIVCATVAFGMGIDKSNVRWVIHYNMPKNIE 313
Query: 314 AYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKYLEL 373
YYQEIGR GRDGL++ F+ AD + F ++ E+Q ++R++++ E
Sbjct: 314 GYYQEIGRGGRDGLAASALLFHSYADVIQLRR-FTEGASNQEVQ---IAKLERMKQFAEA 369
Query: 374 RTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNCR 407
TCRRK LL++F ++ + C CD C+
Sbjct: 370 TTCRRKILLSYF---------GELLAENCGNCDVCK 396
>gi|410724041|ref|ZP_11363242.1| ATP-dependent DNA helicase RecQ [Clostridium sp. Maddingley
MBC34-26]
gi|410602597|gb|EKQ57075.1| ATP-dependent DNA helicase RecQ [Clostridium sp. Maddingley
MBC34-26]
Length = 816
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 157/279 (56%), Gaps = 17/279 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I IA+DEAHC+SQWGHDFR SYR +S+ L + PI+ A TATA+ V DI T L L
Sbjct: 132 ISQIAVDEAHCISQWGHDFRVSYRKISQFIGLLENRPIITAFTATASEEVQKDIITLLKL 191
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
+ P + TGFDR NL L VK + L NF E+ E S IIY T+ E +
Sbjct: 192 KKPKVFITGFDRENL-LINVVKSG---SKKEYLNNFIESNKEVSGIIYAATRKEVENIHG 247
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L NG YHA +S K RKE F+ D ++VAT AFGMGIDKP++R V+HY P
Sbjct: 248 ELKTNGYNVTYYHAGLSEKNRKENQENFIFDRSSIMVATNAFGMGIDKPNIRYVVHYNMP 307
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+++ +YYQEIGRAGRDG +S C + D + + ++ DSE + + ++++
Sbjct: 308 RNIESYYQEIGRAGRDGGNSECILLFSPQDVQVQKYLIENSIEDSERKNNQYRKLQQMMD 367
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
++ +C RKY+L +F + D C C NC
Sbjct: 368 FVHSNSCYRKYILEYF---------GEEYGDHCGNCSNC 397
>gi|375129367|ref|YP_004991462.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
gi|315178536|gb|ADT85450.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
Length = 611
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 154/277 (55%), Gaps = 18/277 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ +IA+DEAHC+SQWGHDFRP Y L +L+ P VPI+A+TATA DI + L L
Sbjct: 143 LAMIAVDEAHCISQWGHDFRPEYAALGQLKQQFPQVPIMALTATADDATRSDILSRLNLT 202
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
DP++ FDRPN+ K + +R L + Q IIYC ++ E V + L
Sbjct: 203 DPHVYLGSFDRPNIRYTLMEKHKPVSQVIRYL---DTQKGHCGIIYCGSRKKVEMVTEKL 259
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
N I+ YHA + +R + F +D I++VVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 260 CNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFDIPRN 319
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + Y AD + + + + + +++ H T M
Sbjct: 320 IESYYQEPGRAGRDGLPAEAVMLYDPADIAWLRRMLDEKSDGPQKQVETHKLTAMS---N 376
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR+ LLN+F DK C NC
Sbjct: 377 FAEAQTCRRQVLLNYFGEYR----------DKPCGNC 403
>gi|296418818|ref|XP_002839022.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635016|emb|CAZ83213.1| unnamed protein product [Tuber melanosporum]
Length = 527
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 160/308 (51%), Gaps = 12/308 (3%)
Query: 123 ILFLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
+L L R ++ I +DEAHCVSQWGHDFRP Y+ L L+ P VP +A+TATAT V
Sbjct: 145 LLSLHRRGKLARIVVDEAHCVSQWGHDFRPDYKTLGNLKSKYPGVPWIALTATATEKVRM 204
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKV 242
D+ +L + F+RPNL S K +++ D+ ++ + IIYC ++
Sbjct: 205 DVQLNLDMPRAKTFTQSFNRPNLNYQVSPKTKNVLDDIVEICRRPEYLNKTGIIYCLSRQ 264
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
CE+ + L GI+ + +HA + ++ + + V+VAT AFGMGIDKPDVR
Sbjct: 265 NCEQTAEKLRTRGIRAQHFHAKLQADEKIRLQKEWQARRFNVIVATIAFGMGIDKPDVRF 324
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIH+ PK L YYQE GRAGRDGL S C+ FY D + + + + +
Sbjct: 325 VIHHTIPKSLEGYYQETGRAGRDGLPSGCFLFYAYPDTSTLYRMIKDGEGSHDQKRRQME 384
Query: 363 MMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKC---CDNCRHNEMLELEQVP 418
M++ V +Y E + CRR +L +F + P +C CDNC E + V
Sbjct: 385 MLQMVVQYCENKAECRRVQVLRYFG--------ERFPEQECRGGCDNCASGIEYETQDVS 436
Query: 419 RGGRMVVE 426
R +E
Sbjct: 437 DYARAALE 444
>gi|262404934|ref|ZP_06081486.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
gi|262348773|gb|EEY97914.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
Length = 620
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 159/283 (56%), Gaps = 16/283 (5%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
LS +P + +IA+DEAHC+SQWGHDFRP Y L +L+ P++P++A+TATA DI
Sbjct: 147 LSHLP-LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHDIM 205
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICE 245
L L +P+ FDRPN+ K + +R L E Q IIYC ++ E
Sbjct: 206 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVE 262
Query: 246 KVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIH 305
+ + L N I+ YHA + +R + F +D +++VVAT AFGMGI+KP+VR V+H
Sbjct: 263 MLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 306 YGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTM 363
+ P+++ +YYQE GRAGRDGL + Y AD + + + +P+ +++ H T
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTA 382
Query: 364 MKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
M + E +TCRR+ LLN+F E + P CD C
Sbjct: 383 MG---AFAEAQTCRRQVLLNYF-------GEYRDQPCGNCDIC 415
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 154/280 (55%), Gaps = 9/280 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVSQWGHDFRP Y+ L ++ P VP++A+TATAT +V D+ +L ++
Sbjct: 977 LARIVIDEAHCVSQWGHDFRPDYKALGDVVRQFPGVPVIALTATATQLVRTDVVANLGIQ 1036
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
+ F+RPNL K ++ + L + ++ G S IIYC ++ CE+V
Sbjct: 1037 GCRQYSQSFNRPNLSYEVLPKGKGVINSIADL--IKEKYTGKSGIIYCLSRKTCEQVAQK 1094
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LS GI+ YHA + R E+ + K+ V+VAT AFGMGIDK DVR VIH+ PK
Sbjct: 1095 LSETGIRAYHYHAGMDSADRSEVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPK 1154
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
L YYQE GRAGRDG S CY +Y D + E ++ M++ V +Y
Sbjct: 1155 SLEGYYQETGRAGRDGKRSECYLYYMYGDSRILRKMIDEGEGSREQKQRLNDMLRTVVQY 1214
Query: 371 LELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
E + CRR +L +F S S+ + CDNCR +
Sbjct: 1215 CENKADCRRAQVLGYF---SEAFDASKC--NNTCDNCRSD 1249
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 163/300 (54%), Gaps = 24/300 (8%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDIC 185
L+R ++ I IDEAHCVSQWGHDFRP Y+ L ELR LP VP++A+TATAT V D+
Sbjct: 836 LNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRNQLPGVPMMALTATATENVKVDVI 895
Query: 186 TSLMLRDPNIINTGFDRPNLYLAASVKQDDI-----MADLRKLTNFENQFEGSTIIYCPT 240
+L + + + F+RPNL +K+ +AD K T++ N+ S I+YC +
Sbjct: 896 HNLRMEGCEVFSQSFNRPNLTYEVRIKKKGTELLASIADTIK-TSYANK---SGIVYCLS 951
Query: 241 KVICEKVCDVLSRN-GIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPD 299
+ CEKV L + I+ YHA + +R +I + V+VAT AFGMGIDKPD
Sbjct: 952 RKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPD 1011
Query: 300 VRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH 359
VR VIH+ PK L YYQE GRAGRDG S CY +Y D + + + + +
Sbjct: 1012 VRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSKQQKNR 1071
Query: 360 SKTMMKRVEKYLELRT-CRR----KYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLEL 414
+ M+ V +Y E R+ CRR Y +F+ + CDNC+ + + EL
Sbjct: 1072 QRQMLHNVVQYCENRSDCRRVQIFAYFNEYFRRQDCNAS---------CDNCKSDSVFEL 1122
>gi|157373532|ref|YP_001472132.1| ATP-dependent DNA helicase RecQ [Shewanella sediminis HAW-EB3]
gi|157315906|gb|ABV35004.1| ATP-dependent DNA helicase RecQ [Shewanella sediminis HAW-EB3]
Length = 607
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 162/292 (55%), Gaps = 19/292 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L AIDEAHC+SQWGHDFRP Y L +LR P VPI+A+TATA DIC L +
Sbjct: 140 ISLFAIDEAHCISQWGHDFRPEYAALGKLREVFPHVPIMALTATADQATRKDICDRLTI- 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
P + T FDRPN+ + K + LR+ +Q S IIYC ++ ++V + L
Sbjct: 199 SPFSLLTSFDRPNIRYTVAEKLN-AANQLRQFVT--DQKGTSGIIYCSSRRRVDEVAERL 255
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G YHA + ++R ++ F+KD + +VVAT AFGMGI+K +VR V+HY PK
Sbjct: 256 RLQGHNAEAYHAGKTQEERADVQDRFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKS 315
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ AYYQE GRAGRDGL S + AD + ++I Q + E K + + +
Sbjct: 316 VEAYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHK--LNTMAAF 373
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLELEQV 417
E +TCRR+ LL++F ES + P CD C R+N M + ++V
Sbjct: 374 AEAQTCRRQVLLHYFD-------ESALEPCGNCDICLDPPKRYNGMQDAQKV 418
>gi|336313085|ref|ZP_08568028.1| ATP-dependent DNA helicase RecQ [Shewanella sp. HN-41]
gi|335863205|gb|EGM68363.1| ATP-dependent DNA helicase RecQ [Shewanella sp. HN-41]
Length = 607
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 159/277 (57%), Gaps = 16/277 (5%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ + AIDEAHC+SQWGHDFRP Y L +L+ P VP++A+TATA IC L +
Sbjct: 140 LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMMALTATADLATRQSICERLGI- 198
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVCDV 250
DP + + FDRPN+ + K + +L +F Q GS+ IIYC ++ ++V D
Sbjct: 199 DPYRLLSSFDRPNIRYTVAEK----LNAANQLRHFLLQQNGSSGIIYCSSRRRVDEVADR 254
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G + YHA ++ ++R + F+KD I +VVAT AFGMGI+K +VR V+HY PK
Sbjct: 255 LCQQGFNAKAYHAGMTQEERGTVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPK 314
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ AYYQE GRAGRDGL + + + AD + ++I Q + E K + +
Sbjct: 315 SIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQSEPGPQQQVEFHK--LNTMAA 372
Query: 370 YLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ E +TCRR+ LL++F ES + P CD C
Sbjct: 373 FAEAQTCRRQVLLHYFD-------ESALEPCGNCDIC 402
>gi|23100496|ref|NP_693963.1| ATP-dependent DNA helicase [Oceanobacillus iheyensis HTE831]
gi|22778729|dbj|BAC14997.1| ATP-dependent DNA helicase [Oceanobacillus iheyensis HTE831]
Length = 715
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 160/289 (55%), Gaps = 19/289 (6%)
Query: 124 LFLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVV 180
F+ I R + LIA DEAHC+SQWGHDFRPSYR + LP +P+L A+TATAT V
Sbjct: 121 FFIQAIKRTYLSLIAFDEAHCISQWGHDFRPSYRSIIPNITRLPHIPVLMALTATATKEV 180
Query: 181 IDDICTSLMLRDPNIINTGFDRPNL---YLAASVKQDDIMADLRKLTNFENQFEGSTIIY 237
I DI L + D + ++TGF+R NL + KQD I + L+ E+Q E S IIY
Sbjct: 181 IRDIQQLLHISDEHTVHTGFERKNLSFHLIKGKNKQDYIRSYLK-----EHQDE-SGIIY 234
Query: 238 CPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDK 297
T+ + + ++L + G YHA +S ++R+E F+ D ++VAT AFGMGIDK
Sbjct: 235 AATRKQVDSIYELLQKAGYSVSKYHAGLSEQERQEEQMSFIHDKTTIMVATNAFGMGIDK 294
Query: 298 PDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQ 357
+VR VIHY P ++ +YYQE GRAGRDG SS C Y D + + + + E Q
Sbjct: 295 SNVRYVIHYAMPMNIESYYQEAGRAGRDGESSDCILLYSPQDVQLQKFLIEQSDMEEEAQ 354
Query: 358 EHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ ++ + Y +C +Y+L++F+ Q CD C
Sbjct: 355 QKEYKKLQSMTNYCHTHSCLNRYILDYFQS-------EQDNASHTCDRC 396
>gi|421491516|ref|ZP_15938879.1| RECQ [Morganella morganii subsp. morganii KT]
gi|400193950|gb|EJO27083.1| RECQ [Morganella morganii subsp. morganii KT]
Length = 562
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 166/294 (56%), Gaps = 26/294 (8%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
L+A+DEAHC+SQWGHDFRP Y + ELR LP VP++A+TATA DIC+ L L DP
Sbjct: 96 LLAVDEAHCISQWGHDFRPEYCAIGELRQHLPGVPVIALTATADNTTRSDICSRLRLSDP 155
Query: 194 NIINTGFDRPNL--YLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCDV 250
I + FDRPN+ L K D +L F +G IIYC ++ E V
Sbjct: 156 LIHISSFDRPNIRYTLVEKYKAFD------QLWMFVRGQKGQCGIIYCNSRNKVEDVAAR 209
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ YHA + QR+ + F+KD ++VVVAT AFGMGI+K +VR V H+ P+
Sbjct: 210 LQKRGLSVAAYHAGLDNSQREWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPR 269
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
++ +YYQE GRAGRDG+S+ FY AD + + + +P +I++H M
Sbjct: 270 NIESYYQETGRAGRDGVSAEAVLFYDPADMAWLRRCLDEKPAGPQKDIEQHKLNAMG--- 326
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLELEQV 417
+ + +TCRR LLN+F E++ P CD C +++ ++E +Q
Sbjct: 327 AFAQAQTCRRLVLLNYF-------GENRQTPCGNCDICLDPPKQYDGLVEAQQA 373
>gi|251787844|ref|YP_003002565.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
gi|247536465|gb|ACT05086.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
Length = 599
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 149/256 (58%), Gaps = 10/256 (3%)
Query: 133 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
LIAIDEAHC+SQWGHDFRP YR L +++ P +PI+A+TATA DI L LRD
Sbjct: 131 ALIAIDEAHCISQWGHDFRPEYRALGQIKQQFPALPIVALTATADETTRQDIARLLDLRD 190
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVL 251
P + FDRPN+ K L +L F + Q S I+YC ++ E +C L
Sbjct: 191 PLTNISSFDRPNIRYTLVEK----FKPLDQLWLFIQGQRGKSGIVYCNSRAKVEDLCARL 246
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G+ YHA + +R ++ F++D ++VVVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 247 QNRGLSVGAYHAGLENDRRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRN 306
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + FY AD + + + +P +I+ H M
Sbjct: 307 IESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGMQLDIERHKLNAMG---A 363
Query: 370 YLELRTCRRKYLLNHF 385
+ E +TCRR LLN+F
Sbjct: 364 FAEAQTCRRLVLLNYF 379
>gi|242237700|ref|YP_002985881.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
gi|242129757|gb|ACS84059.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
Length = 607
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 157/276 (56%), Gaps = 17/276 (6%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
LIAIDEAHC+SQWGHDFRP YR L ++ P +P++A+TATA +DI L LRDP
Sbjct: 142 LIAIDEAHCISQWGHDFRPEYRELGYIKQRFPQLPVVALTATADETTRNDIIRLLGLRDP 201
Query: 194 NIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCDVLS 252
+ + FDRPN+ K L +L F + Q S IIYC ++ E + L
Sbjct: 202 LVQISSFDRPNIRYTLVEK----FKPLDQLWLFVQGQRGKSGIIYCNSRAKVEDISARLQ 257
Query: 253 RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKDL 312
G+ YHA + ++R ++ F++D ++VVVAT AFGMGI+KP+VR V+H+ P+ +
Sbjct: 258 NRGLSVGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTI 317
Query: 313 SAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+YYQE GRAGRDGL++ FY AD + + + +P +I+ H M +
Sbjct: 318 ESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPASAQLDIERHKLNAMG---AF 374
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +TCRR LLN+F E++ P CD C
Sbjct: 375 AEAQTCRRLVLLNYF-------GENRQQPCGNCDIC 403
>gi|199598310|ref|ZP_03211730.1| Superfamily II DNA helicase [Lactobacillus rhamnosus HN001]
gi|199590763|gb|EDY98849.1| Superfamily II DNA helicase [Lactobacillus rhamnosus HN001]
Length = 593
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDDICTSLML 190
I L AIDEAHC+SQWGHDFRPSY L+ + LP P ++A+TATATP V DIC LM+
Sbjct: 133 ISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATPRVAQDICQRLMI 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
D +INTGF+R NL QD+ D L + + S IIY T+ +++
Sbjct: 193 PDDGVINTGFERDNLSFKVVRDQDE---DRYLLDYLKLNVDQSGIIYASTRKEVDRIYAF 249
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + YHA ++ KQR F+ D ++VAT AFGMGIDK +VR VIH PK
Sbjct: 250 LQHKQLPVAKYHAGMTEKQRAANQEDFLFDRKPIMVATNAFGMGIDKSNVRFVIHAQIPK 309
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
DL +YYQE GRAGRDGL S ++ D + + D Q +K +E+Y
Sbjct: 310 DLESYYQEAGRAGRDGLPSEAILLFRPQDLQVQRFFIEQSEGDEAHQRRQYEKLKVMERY 369
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
C ++++LN+F ++ P C NC
Sbjct: 370 ANTDQCLQQFILNYF-------GQTGTAPCGRCSNC 398
>gi|421066751|ref|ZP_15528313.1| ATP-dependent DNA helicase RecQ, partial [Pelosinus fermentans A12]
gi|392453276|gb|EIW30158.1| ATP-dependent DNA helicase RecQ, partial [Pelosinus fermentans A12]
Length = 608
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 162/289 (56%), Gaps = 11/289 (3%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICT 186
++ I L+AIDEAHCVSQWGHDFRPSYR + LP+ PI+ A TATAT V DI T
Sbjct: 128 KVLTISLLAIDEAHCVSQWGHDFRPSYRAVGTFIASLPNRPIIGAFTATATTDVTQDIIT 187
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
L LR+P++ TGFDR NL ++ L+ +T + Q S IIY T+ +
Sbjct: 188 LLALRNPDVYMTGFDRENLSFTVIRGENKQDFTLKYITANKEQ---SGIIYAATRKEVDN 244
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ +L + G YHA + K+R+ F+ D I ++VAT AFGMGIDK +VR VIHY
Sbjct: 245 LYSLLYKKGYSVGKYHAGLPDKERQHYQEQFIYDNISIMVATNAFGMGIDKSNVRYVIHY 304
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ AYYQE GRAGRDG S C + D + + D++ + + + ++
Sbjct: 305 NMPKNMEAYYQEAGRAGRDGEPSECMLLFGAQDPLLQRYLIEQTTFDTDRKTNELSKLQT 364
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR-HNEMLEL 414
+ Y C RK++L++F +S T + C NC+ NE+ ++
Sbjct: 365 MVDYCHTPECLRKFILSYFGETSDTTECAN------CSNCKDDNELTDI 407
>gi|303228468|ref|ZP_07315299.1| ATP-dependent DNA helicase RecQ [Veillonella atypica
ACS-134-V-Col7a]
gi|302516826|gb|EFL58737.1| ATP-dependent DNA helicase RecQ [Veillonella atypica
ACS-134-V-Col7a]
Length = 610
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 158/279 (56%), Gaps = 19/279 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I + +DEAHC+SQWGHDFRPSYR + + LP P++ A TATAT V +DI T L L
Sbjct: 137 ISQVIVDEAHCISQWGHDFRPSYRLIGDWLASLPKRPVVGAFTATATKAVENDIKTLLGL 196
Query: 191 RDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVC 248
N+ TGFDRPNL + + K+ D + D + + EN IIYC T+ E+V
Sbjct: 197 DHANVYVTGFDRPNLSFSVVRTPKRMDYVVDYVRRHSHEN-----GIIYCSTRKDVERVY 251
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D L+R GIQ YHA +S + RK++ + D ++V+VAT AFGMGIDK +VR V+HY
Sbjct: 252 DNLTRAGIQTGYYHAGLSDEMRKDMQNKYAFDQLQVMVATNAFGMGIDKSNVRYVLHYQM 311
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKRV 367
P+++ +YYQE GRAGRDG + C Y D +I Q +L Q + + +
Sbjct: 312 PRNMESYYQEAGRAGRDGAPAECILLYSGQDVRVHKYLIEQGHLEPQREQVELRKLQSMI 371
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ Y TC RKY+L +F ++ P C NC
Sbjct: 372 D-YCFCSTCLRKYMLAYF---------GEIVPWLECSNC 400
>gi|253991584|ref|YP_003042940.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
gi|211638462|emb|CAR67084.1| atp-dependent dna helicase recq (ec 3.6.1.-) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783034|emb|CAQ86199.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
Length = 608
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 150/256 (58%), Gaps = 10/256 (3%)
Query: 133 VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRD 192
++A+DEAHC+SQWGHDFRP YR L +LR P +P++A+TATA +DI L L +
Sbjct: 141 AILAVDEAHCISQWGHDFRPEYRALGQLRQRFPTLPVIALTATADETTRNDIVRLLNLNN 200
Query: 193 PNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDVL 251
P I + FDRPN+ K L +L F +G S IIYC ++ E+ + L
Sbjct: 201 PLIHISSFDRPNIRYTLIEK----YKPLDQLWLFIRAQKGKSGIIYCNSRSKVEETSERL 256
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+ G+ PYHA + QR + F +D ++VVVAT AFGMGI+KP+VR V+H+ P++
Sbjct: 257 QKRGLSVAPYHAGLDNNQRARVQDAFQRDDLQVVVATVAFGMGINKPNVRFVVHFNIPRN 316
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVEK 369
+ +YYQE GRAGRDGL + FY AD + + + +P +I+ H M
Sbjct: 317 IESYYQETGRAGRDGLPAEAVLFYDPADMVWLRRCLEEKPVGTQQDIERHKLNAMG---A 373
Query: 370 YLELRTCRRKYLLNHF 385
+ E +TCRR LLN+F
Sbjct: 374 FAEAQTCRRLVLLNYF 389
>gi|455737381|ref|YP_007503647.1| ATP-dependent DNA helicase RecQ [Morganella morganii subsp.
morganii KT]
gi|455418944|gb|AGG29274.1| ATP-dependent DNA helicase RecQ [Morganella morganii subsp.
morganii KT]
Length = 608
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 166/294 (56%), Gaps = 26/294 (8%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
L+A+DEAHC+SQWGHDFRP Y + ELR LP VP++A+TATA DIC+ L L DP
Sbjct: 142 LLAVDEAHCISQWGHDFRPEYCAIGELRQHLPGVPVIALTATADNTTRSDICSRLRLSDP 201
Query: 194 NIINTGFDRPNL--YLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCDV 250
I + FDRPN+ L K D +L F +G IIYC ++ E V
Sbjct: 202 LIHISSFDRPNIRYTLVEKYKAFD------QLWMFVRGQKGQCGIIYCNSRNKVEDVAAR 255
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ YHA + QR+ + F+KD ++VVVAT AFGMGI+K +VR V H+ P+
Sbjct: 256 LQKRGLSVAAYHAGLDNSQREWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPR 315
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
++ +YYQE GRAGRDG+S+ FY AD + + + +P +I++H M
Sbjct: 316 NIESYYQETGRAGRDGVSAEAVLFYDPADMAWLRRCLDEKPAGPQKDIEQHKLNAMG--- 372
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLELEQV 417
+ + +TCRR LLN+F E++ P CD C +++ ++E +Q
Sbjct: 373 AFAQAQTCRRLVLLNYF-------GENRQTPCGNCDICLDPPKQYDGLVEAQQA 419
>gi|393773102|ref|ZP_10361501.1| ATP-dependent DNA helicase RecQ [Novosphingobium sp. Rr 2-17]
gi|392721484|gb|EIZ78950.1| ATP-dependent DNA helicase RecQ [Novosphingobium sp. Rr 2-17]
Length = 625
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 145/283 (51%), Gaps = 26/283 (9%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
RI L AIDEAHCVS+WGHDFRP YR L L P VP LA+TATA DI L +
Sbjct: 164 RIALFAIDEAHCVSEWGHDFRPDYRLLRPLLDAFPQVPRLALTATADNHTRADILAQLGI 223
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDV 250
+ +I GFDRPN+ + D+ M R+L ++ G IIY PT+ E++
Sbjct: 224 PNEGLIVAGFDRPNIRYTIRPR-DNAM---RQLKAVVDENPGPGIIYAPTRARVEQLATS 279
Query: 251 LS-RNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L+ G + PYHA + R FV V+VAT AFGMGIDKPDVR V H G P
Sbjct: 280 LATATGRRVLPYHAGLDADVRARNQAAFVASEDMVMVATVAFGMGIDKPDVRFVAHAGIP 339
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEH----SKTMMK 365
K + YYQE GRAGRDG SV F+ DF + SEI+ H + +
Sbjct: 340 KSIEGYYQETGRAGRDGDPSVAVMFWGADDFARARQRL------SEIEPHRLQSERQRLD 393
Query: 366 RVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ +E CRR LL HF + PP C CDNC
Sbjct: 394 ALAGLVETAACRRAVLLRHF---------GEDPPQACGNCDNC 427
>gi|167765809|ref|ZP_02437862.1| hypothetical protein CLOSS21_00300 [Clostridium sp. SS2/1]
gi|167712526|gb|EDS23105.1| ATP-dependent DNA helicase RecQ [Clostridium sp. SS2/1]
Length = 625
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 150/265 (56%), Gaps = 10/265 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPV-VIDDICTSLM 189
+I ++A+DEAHCVSQWG DFRPSY + E LP P+L V DDI L
Sbjct: 138 KISMLAVDEAHCVSQWGQDFRPSYLKILEFLKKLPYRPVLTAYTATATAEVRDDIMDILN 197
Query: 190 LRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGST-IIYCPTKVICEKVC 248
LRDP ++ TGFDR NLY A +D L L E + GS+ IIYC ++ E+VC
Sbjct: 198 LRDPFVLTTGFDRENLYYAVKRPRDKYRELLSYLKEKEEKMPGSSGIIYCLSRKNVEEVC 257
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
L +G YHA +S ++RKE F+ D +++VAT AFGMGIDKPDVR V+HY
Sbjct: 258 YQLREDGFSVTRYHAGLSDEERKENQEDFIYDRKQIMVATNAFGMGIDKPDVRFVVHYNM 317
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTM----- 363
PK++ +YYQE GRAGRDG + C +Y D N + + + E+ +K +
Sbjct: 318 PKNMESYYQEAGRAGRDGEPAECILYYAPIDNRTNRFLIENGEENEELDAITKQIVMERD 377
Query: 364 ---MKRVEKYLELRTCRRKYLLNHF 385
++++ Y + C R Y+LN+F
Sbjct: 378 WERLRQMTFYCYTKECLRHYILNYF 402
>gi|398349668|ref|ZP_10534371.1| DNA helicase [Leptospira broomii str. 5399]
Length = 624
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 158/291 (54%), Gaps = 22/291 (7%)
Query: 125 FLSRIPRI--VLIAIDEAHCVSQWGHDFRPSYRCLSELRLPL-PDVPILAVTATATPVVI 181
FL +P++ L+A+DEAHCVSQWGHDFRP YR L LR ++P +A+TATAT V
Sbjct: 135 FLDLVPKLPLGLVAVDEAHCVSQWGHDFRPEYRKLYTLRSSFHENIPWVALTATATDRVK 194
Query: 182 DDICTSLMLRDPNIINTGFDRPNLYL------AASVKQDDIMADLRKLTNFENQFEGSTI 235
DIC SL L++P + + RPNL + K+ ++++ L + NF G I
Sbjct: 195 KDICDSLGLKNPTSVQGTYSRPNLRFRIQFPESERDKEKELLSIL-ETGNFRKSNSGKAI 253
Query: 236 IYCPTKVICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGI 295
IYC T+ + V ++L ++G + YHA + R++ + V+VAT AFGMG+
Sbjct: 254 IYCATRSKVDDVYEMLKKSGYKVGKYHAGRTDSSREKTQDGYTSGKTNVLVATNAFGMGL 313
Query: 296 DKPDVRCVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSE 355
D P+VR V+HY P + +YYQE GRAGRDG S C F+ T+D + N + N
Sbjct: 314 DSPNVRLVLHYQVPSSIESYYQEAGRAGRDGKDSDCVLFFHTSDLSIQNFLLSKEAN--- 370
Query: 356 IQEHSKTMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ +T++ V+ Y CR++ L +F + P CD+C
Sbjct: 371 -YKGGETLLSHVKSYASSSVCRQQLLCGYFG--------ETIEPCGVCDSC 412
>gi|418037617|ref|ZP_12675992.1| Hydrolase acting on acid anhydrides in phosphorous-containing
anhydrides [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|354694385|gb|EHE94051.1| Hydrolase acting on acid anhydrides in phosphorous-containing
anhydrides [Lactococcus lactis subsp. cremoris CNCM
I-1631]
Length = 592
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 156/263 (59%), Gaps = 6/263 (2%)
Query: 125 FLSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVP-ILAVTATATPVVIDD 183
FL ++P I L+AIDEAHC+SQWGHDFRPSY + LP P +LA+TATATP DD
Sbjct: 124 FLQKLP-IDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKFADD 182
Query: 184 ICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRK-LTNFENQFEGSTIIYCPTKV 242
I L + + I TGF R NL VK D L+ L N E+ E + IIY T+
Sbjct: 183 IQKLLSISPSHTIKTGFLRENLRFEV-VKGMDKRTFLKNYLKNQES--EAAGIIYASTRK 239
Query: 243 ICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRC 302
E++C+ L+ N ++ YHA +S ++R+ LF+ D + ++VAT AFGMGI+KP+VR
Sbjct: 240 EVEEICEWLNHNHFKSVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRF 299
Query: 303 VIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKT 362
VIHY P + +YYQE GRAGRDGL S + D N + + + D +EH
Sbjct: 300 VIHYALPATIESYYQEAGRAGRDGLESDANLLFSPNDLRIRNFLIEQSEGDEAHKEHEYE 359
Query: 363 MMKRVEKYLELRTCRRKYLLNHF 385
+++++ Y TC ++Y+L +F
Sbjct: 360 KLRQMQAYTSAETCLQRYILQYF 382
>gi|392553532|ref|ZP_10300669.1| ATP-dependent DNA helicase [Pseudoalteromonas spongiae
UST010723-006]
Length = 607
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 153/276 (55%), Gaps = 13/276 (4%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
I L AIDEAHCVS WGHDFRP Y L +L+ +PI+A+TATA +DI L L
Sbjct: 143 IGLFAIDEAHCVSHWGHDFRPHYYRLGQLKQRFSHIPIMALTATADIATRNDIVMQLGLT 202
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
+ +I FDRPN+ K L +L F + +G S IIYC ++ + + +
Sbjct: 203 NAHIYTGSFDRPNIRYTIEEK----FKPLSQLMRFLKEQKGQSGIIYCSSRKRVDDIAEK 258
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L G YHA + +QR + F +D I +VVAT AFGMGI+KP+VR VIHY PK
Sbjct: 259 LVDAGYNAASYHAGLENEQRSFVQNAFARDDIHIVVATVAFGMGINKPNVRFVIHYDIPK 318
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
++ +YYQE GRAGRDGLS+ ++ AD + F ++ D + ++ + + +
Sbjct: 319 NIESYYQETGRAGRDGLSAEAIMYFDPADVPRVKRFFD-DIPDEQRRKVEEQRFNAMASF 377
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E +TCRR+ LLN+F +E Q P CD C
Sbjct: 378 AEAQTCRRQILLNYF-------SEYQGKPCGNCDIC 406
>gi|373456060|ref|ZP_09547865.1| ATP-dependent DNA helicase RecQ [Dialister succinatiphilus YIT
11850]
gi|371934215|gb|EHO62019.1| ATP-dependent DNA helicase RecQ [Dialister succinatiphilus YIT
11850]
Length = 759
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 159/289 (55%), Gaps = 18/289 (6%)
Query: 126 LSRIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDI 184
L+++P + +I IDEAHCVSQWGHDFRPSYR + + LP P++ A TATATP+V D+
Sbjct: 125 LAQVP-LSMIVIDEAHCVSQWGHDFRPSYRKIKDFIDSLPRRPVVTAFTATATPLVEADM 183
Query: 185 CTSLMLRDPNIINTGFDRPNL---YLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTK 241
SL L + TG DRPNL + + K+D I LR + + + + S IIYC T+
Sbjct: 184 KESLGLEKARVFRTGLDRPNLSFRVIQGAAKEDFI---LRYVKSHKKE---SGIIYCATR 237
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
+ V D+L R GI YHA + + R++ F D + V+VAT AFGMGIDK +VR
Sbjct: 238 KAVDTVYDLLRRRGINAGRYHAGMEDEDRRQAQEDFSFDNVTVMVATNAFGMGIDKSNVR 297
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
VIHY PK L AYYQE GRAGRDG S C Y D + + D + ++
Sbjct: 298 YVIHYQMPKSLEAYYQEAGRAGRDGAKSECILLYSGQDAGIQRYLIEQGNQDEDQRKMDY 357
Query: 362 TMMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNE 410
+ + Y + +C R ++L +F G VT P C NC +
Sbjct: 358 HRLNAMVDYCQTTSCLRNFILAYF-GEKVT------EPCGHCGNCESGK 399
>gi|225011808|ref|ZP_03702246.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
gi|225004311|gb|EEG42283.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
Length = 729
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 150/260 (57%), Gaps = 13/260 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSEL--RLPLPDVPILAVTATATPVVIDDICTSL 188
+I +A+DEAHC+S+WGHDFRP YR L + +L P +PI+A+TATATP V +D+ +L
Sbjct: 135 KISFLAVDEAHCISEWGHDFRPEYRNLRAILEQLEQP-IPIIALTATATPKVQEDVMKNL 193
Query: 189 MLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKV 247
+ + F+RPNLY K + +D+ + F Q G S IIYC ++ E++
Sbjct: 194 RISGARLFKASFNRPNLYYEVRPKTGQVDSDIIR---FIKQNSGKSGIIYCLSRKRVEEL 250
Query: 248 CDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYG 307
L NGI PYHA + K R F+KD V+VAT AFGMGIDKPDVR VIH+
Sbjct: 251 AQTLQVNGINALPYHAGLDSKSRVNNQDQFLKDDCDVIVATIAFGMGIDKPDVRFVIHHD 310
Query: 308 APKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK--NNMIFQPNLNDSEIQEHSKTMMK 365
PK + +YYQE GRAGRDG C FY D K M +P L + EI ++
Sbjct: 311 IPKSIESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKP-LAEQEI---GMALLA 366
Query: 366 RVEKYLELRTCRRKYLLNHF 385
+ Y E RRK++L++F
Sbjct: 367 DMVAYAETSLSRRKFILHYF 386
>gi|212213044|ref|YP_002303980.1| ATP-dependent DNA helicase [Coxiella burnetii CbuG_Q212]
gi|212011454|gb|ACJ18835.1| ATP-dependent DNA helicase [Coxiella burnetii CbuG_Q212]
Length = 601
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 149/275 (54%), Gaps = 24/275 (8%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLSR+ ++ L+AIDEAHCVSQWGHDFRP Y L ELR P VP +A+TATA
Sbjct: 123 FLSRLREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFIALTATADKQTRQ 182
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L N+ F+RPN+ KQ +L NF +++ I+YC ++
Sbjct: 183 DILQRLRLTKANVHIASFNRPNIRYTLLEKQKS----YNQLVNFLKDRKADFGIVYCLSR 238
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L +G PYHA + QR + F +D + ++VAT AFGMGIDKP+VR
Sbjct: 239 NRVEEVAAKLQADGYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVR 298
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V+HY PK + YYQE GRAGRDGL S Y D + S I+ +
Sbjct: 299 FVVHYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIA---------VIKSFIENGNN 349
Query: 362 TMMKRVE--------KYLELRTCRRKYLLNHFKGS 388
+ KR+E + E RTCRR+ LLN+F S
Sbjct: 350 EIRKRIELHKLNCMSAFAEARTCRRRVLLNYFNES 384
>gi|345022486|ref|ZP_08786099.1| ATP-dependent DNA helicase [Ornithinibacillus scapharcae TW25]
Length = 714
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 156/282 (55%), Gaps = 14/282 (4%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPI-LAVTATATPVVIDDICT 186
R +I L+A DEAHC+SQWGHDFRPSYR + + ++P+ +A+TATAT VI DI
Sbjct: 128 RKIKIALVAFDEAHCISQWGHDFRPSYRSIVPNLNQIGNIPVVMALTATATEEVISDIQE 187
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
L + + N+INTGF R NL VK D + +R E + S IIY T+ +
Sbjct: 188 LLHIENNNVINTGFARDNLAFHI-VKGKDRSSYIRAF--LEEHTDESGIIYTATRKQADA 244
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ D LS GI+ YHA +S + RK+ F+ D V++AT AFGMGIDK +VR VIHY
Sbjct: 245 LFDQLSSRGIEVAKYHAGMSEQARKQAQAAFIHDQKHVMIATNAFGMGIDKSNVRYVIHY 304
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
P ++ +YYQE GRAGRDG S C + D + + +L D +++ ++
Sbjct: 305 AMPMNIESYYQEAGRAGRDGEFSDCILLFSPQDIQLQKFLIEQSLMDEAAKQNEYRKLQS 364
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKC--CDNC 406
+ Y + C Y+L++FK ++ P C C NC
Sbjct: 365 MVNYCHTQGCLSSYILDYFKDAT--------PHQNCGRCSNC 398
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 157/296 (53%), Gaps = 12/296 (4%)
Query: 137 IDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDPNII 196
IDEAHCVSQWGHDFRP Y+ L LR P VP +A+TATATP V DI L + P
Sbjct: 536 IDEAHCVSQWGHDFRPDYKKLKCLRKNYPKVPTMALTATATPRVRTDILHQLDMTKPKWF 595
Query: 197 NTGFDRPNLYLAASVKQ-----DDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ F+RPNL + K+ D+++A ++ T F+N I+YC ++ CE L
Sbjct: 596 MSSFNRPNLRYSIISKKGKNCSDEVVAMIK--TKFKNV---CGIVYCLSRKDCEDYAAHL 650
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
+N I+ YHA ++ QR G ++ D I V+ AT AFGMGIDKP+VR VIH PK
Sbjct: 651 KKNCIKALSYHAGLTDNQRNNCQGKWILDEIHVICATIAFGMGIDKPNVRYVIHAALPKS 710
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
+ YYQE GRAGRDG + C FY AD + MI N N I+ H + K V
Sbjct: 711 IEGYYQESGRAGRDGEIADCILFYNYADMHRIRKMIEMDNSNPQVIRTHMDNLFKMVAFC 770
Query: 371 LELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQVPRGGRMVVE 426
CRR LN+F G + CDNCR + + + V + V++
Sbjct: 771 ENTTDCRRSLQLNYF-GEVFNREQCASSKITACDNCRCKDEITMLDVTEDAKEVMK 825
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 158/294 (53%), Gaps = 27/294 (9%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVSQWGHDFRP Y+ L L+ P +P+LA+TATAT V +D+ +L L
Sbjct: 639 LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPKIPVLALTATATASVKEDVVQALGLI 698
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ I F+RPNL+ + K + D+ K EN F+ I+YC +++ CEKV + L
Sbjct: 699 NCIIFRQSFNRPNLWYSVIPKTKKCVDDIDKFIK-ENHFDECGIVYCLSRMDCEKVAERL 757
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G + YH + QR I + KD I ++ AT AFGMGI+KPDVR VIH+ PK
Sbjct: 758 QECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS 817
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSE-IQEHSKTMMKRVEK 369
+ Y+QE GRAGRDGL S C +Y +D+ + +MI Q S + +++T + +
Sbjct: 818 IEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGR 877
Query: 370 YLELRT---------------CRRKYLLNHFKGSSVTVAESQVPPD--KCCDNC 406
LE T CRR L HF E P + K CDNC
Sbjct: 878 ILETNTENLLRMVSYCENDVDCRRLLQLVHF-------GEKFDPGNCKKTCDNC 924
>gi|389873105|ref|YP_006380524.1| ATP-dependent DNA helicase [Advenella kashmirensis WT001]
gi|388538354|gb|AFK63542.1| ATP-dependent DNA helicase [Advenella kashmirensis WT001]
Length = 609
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 144/278 (51%), Gaps = 14/278 (5%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
RI L AIDEAHCVSQWGHDFRP Y LS L+ PDVP +A+TATATP D+I L L
Sbjct: 133 RIALFAIDEAHCVSQWGHDFRPEYLGLSRLQEQWPDVPRIALTATATPQTRDEIAQRLGL 192
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF--ENQFEGSTIIYCPTKVICEKVC 248
GFDRPN+ V+++D+ R+L F E S I+YC ++ E
Sbjct: 193 TQARHFVAGFDRPNIRYVI-VEKNDVR---RQLLGFIREEHAGDSGIVYCLSRNKTEDTA 248
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
+ L R GI YHA + + R + F++D V+VAT AFGMGI+KPDVR V H
Sbjct: 249 EFLCREGIDAMAYHAGLPAELRAQRQARFLRDDGVVMVATIAFGMGINKPDVRFVAHIDL 308
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
PK + YYQE GRAGRDGL + + Y D + + + D + S + +
Sbjct: 309 PKSVEGYYQETGRAGRDGLPATAWMAYGLQDVVQQRKMIDDSTGDEFFKRRSGAQLDGML 368
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
E CRR LL +F Q P CD C
Sbjct: 369 ALCETVQCRRTRLLAYFG--------QQSEPCGNCDVC 398
>gi|29653815|ref|NP_819507.1| ATP-dependent DNA helicase [Coxiella burnetii RSA 493]
gi|29541078|gb|AAO90021.1| ATP-dependent DNA helicase [Coxiella burnetii RSA 493]
Length = 601
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 149/275 (54%), Gaps = 24/275 (8%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLSR+ ++ L+AIDEAHCVSQWGHDFRP Y L ELR P VP +A+TATA
Sbjct: 123 FLSRLREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFIALTATADKQTRQ 182
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L N+ F+RPN+ KQ +L NF +++ I+YC ++
Sbjct: 183 DILQRLRLTKANVHIASFNRPNIRYTLLEKQKS----YNQLVNFLKDRKADFGIVYCLSR 238
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L +G PYHA + QR + F +D + ++VAT AFGMGIDKP+VR
Sbjct: 239 NRVEEVAAKLQADGYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVR 298
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V+HY PK + YYQE GRAGRDGL S Y D + S I+ +
Sbjct: 299 FVVHYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIA---------VIKSFIENGNN 349
Query: 362 TMMKRVE--------KYLELRTCRRKYLLNHFKGS 388
+ KR+E + E RTCRR+ LLN+F S
Sbjct: 350 EIRKRIELHKLNCMSAFAEARTCRRRVLLNYFNES 384
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 165/310 (53%), Gaps = 21/310 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ IDEAHCVSQWGHDFRP Y+ L L+ P++P+LA+TATAT V +D+ +L L
Sbjct: 573 LARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLV 632
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVCDVL 251
+ + F+RPNL+ + K + D+ K EN F+ IIYC +++ CEKV + L
Sbjct: 633 NCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIK-ENHFDECGIIYCLSRMDCEKVSERL 691
Query: 252 SRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPKD 311
G + YH + +QR I + KD I ++ AT AFGMGI+KPDVR VIH+ PK
Sbjct: 692 QEFGHKTAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS 751
Query: 312 LSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDS-------------EIQ 357
+ Y+QE GRAGRDG S C +Y D+ + +MI Q ++ S I
Sbjct: 752 IEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASLGRIL 811
Query: 358 EHSKTMMKRVEKYLELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHNEMLELEQ 416
E + + R+ Y E CRR L HF G + K CDNC ++ L +
Sbjct: 812 ETNTENLLRMVSYCENEVECRRFLQLVHF-GEKFDSTNCK----KTCDNCCSSQSLIDKD 866
Query: 417 VPRGGRMVVE 426
V R +VE
Sbjct: 867 VTLITRQLVE 876
>gi|307609659|emb|CBW99166.1| hypothetical protein LPW_09501 [Legionella pneumophila 130b]
Length = 608
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 160/287 (55%), Gaps = 20/287 (6%)
Query: 125 FLSRIPR--IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FL R+ I L AIDEAHC+SQWGHDFRP Y CL L+ PD+P++A+TATA +
Sbjct: 132 FLDRLSECTISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI T L + P F+RPN++ K + + ++L F ++ + S IIYC T+
Sbjct: 192 DIVTKLNYQ-PKKYVVSFNRPNIHYKVVPKTNAV----KQLNLFLQSDTQQSGIIYCGTR 246
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E + L G++ R YHA +S +R+E+ LF D I +VVAT AFGMGIDKP+VR
Sbjct: 247 HTVEHLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAFGMGIDKPNVR 306
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTK-NNMIFQPNLNDSEIQEHS 360
V+H+ PK + YYQE GRAGRDGL + Y AD + + I L++ Q H
Sbjct: 307 FVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIPLDE---QRHI 363
Query: 361 KT-MMKRVEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+T + + + E CRR+ LL +F S T K CD C
Sbjct: 364 ETNKLNHMLAFAEASHCRRQILLRYFDEPSHTEC-------KNCDVC 403
>gi|227325786|ref|ZP_03829810.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 609
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 153/258 (59%), Gaps = 10/258 (3%)
Query: 131 RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLML 190
+I LIA+DEAHC+SQWGHDFRP YR L +++ P +P +A+TATA +DI L L
Sbjct: 139 QISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRNDIVRLLDL 198
Query: 191 RDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTKVICEKVCD 249
+ P I + FDRPN+ K L +L F + Q S IIYC ++ E +C
Sbjct: 199 QSPLIQISSFDRPNIRYTLVEK----FKPLDQLWMFVQGQRGKSGIIYCNSRSRVEDICA 254
Query: 250 VLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAP 309
L G+ YHA + ++R ++ F++D ++VVVAT AFGMGI+KP+VR V+H+ P
Sbjct: 255 RLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIP 314
Query: 310 KDLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRV 367
+++ +YYQE GRAGRDGL++ FY AD + + + +P +I+ H M
Sbjct: 315 RNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQLDIERHKLNAMG-- 372
Query: 368 EKYLELRTCRRKYLLNHF 385
+ E +TCRR LLN+F
Sbjct: 373 -AFAEAQTCRRLVLLNYF 389
>gi|161830707|ref|YP_001596401.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii RSA 331]
gi|161762574|gb|ABX78216.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii RSA 331]
Length = 601
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 149/275 (54%), Gaps = 24/275 (8%)
Query: 125 FLSRIP--RIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVID 182
FLSR+ ++ L+AIDEAHCVSQWGHDFRP Y L ELR P VP +A+TATA
Sbjct: 123 FLSRLREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFIALTATADKQTRQ 182
Query: 183 DICTSLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNF-ENQFEGSTIIYCPTK 241
DI L L N+ F+RPN+ KQ +L NF +++ I+YC ++
Sbjct: 183 DILQRLRLTKANVHIASFNRPNIRYTLLEKQKS----YNQLVNFLKDRKADFGIVYCLSR 238
Query: 242 VICEKVCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVR 301
E+V L +G PYHA + QR + F +D + ++VAT AFGMGIDKP+VR
Sbjct: 239 NRVEEVAAKLQADGYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVR 298
Query: 302 CVIHYGAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSK 361
V+HY PK + YYQE GRAGRDGL S Y D + S I+ +
Sbjct: 299 FVVHYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIA---------VIKSFIENGNN 349
Query: 362 TMMKRVE--------KYLELRTCRRKYLLNHFKGS 388
+ KR+E + E RTCRR+ LLN+F S
Sbjct: 350 EIRKRIELHKLNCMSAFAEARTCRRRVLLNYFNES 384
>gi|392959946|ref|ZP_10325423.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans DSM 17108]
gi|421053587|ref|ZP_15516563.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B4]
gi|421058239|ref|ZP_15520955.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B3]
gi|421071053|ref|ZP_15532176.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans A11]
gi|392442012|gb|EIW19625.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B4]
gi|392447400|gb|EIW24641.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans A11]
gi|392455915|gb|EIW32686.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans DSM 17108]
gi|392461208|gb|EIW37428.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B3]
Length = 707
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 162/289 (56%), Gaps = 11/289 (3%)
Query: 128 RIPRIVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICT 186
++ I L+AIDEAHCVSQWGHDFRPSYR + LP+ PI+ A TATAT V DI T
Sbjct: 128 KVLTISLLAIDEAHCVSQWGHDFRPSYRAVGTFIASLPNRPIIGAFTATATTDVTQDIIT 187
Query: 187 SLMLRDPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEK 246
L LR+P++ TGFDR NL ++ L+ +T + Q S IIY T+ +
Sbjct: 188 LLALRNPDVYMTGFDRENLSFTVIRGENKQDFTLKYITANKEQ---SGIIYAATRKEVDN 244
Query: 247 VCDVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHY 306
+ +L + G YHA + K+R+ F+ D I ++VAT AFGMGIDK +VR VIHY
Sbjct: 245 LYSLLYKKGYSVGKYHAGLPDKERQHYQEQFIYDNISIMVATNAFGMGIDKSNVRYVIHY 304
Query: 307 GAPKDLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKR 366
PK++ AYYQE GRAGRDG S C + D + + D++ + + + ++
Sbjct: 305 NMPKNMEAYYQEAGRAGRDGEPSECMLLFGAQDPLLQRYLIEQTTFDTDRKTNELSKLQT 364
Query: 367 VEKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNCR-HNEMLEL 414
+ Y C RK++L++F +S T + C NC+ NE+ ++
Sbjct: 365 MVDYCHTPECLRKFILSYFGETSDTTECAN------CSNCKDDNELTDI 407
>gi|410086312|ref|ZP_11283024.1| ATP-dependent DNA helicase RecQ [Morganella morganii SC01]
gi|409767157|gb|EKN51237.1| ATP-dependent DNA helicase RecQ [Morganella morganii SC01]
Length = 608
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 166/294 (56%), Gaps = 26/294 (8%)
Query: 134 LIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLRDP 193
L+A+DEAHC+SQWGHDFRP Y + ELR LP VP++A+TATA DIC+ L L DP
Sbjct: 142 LLAVDEAHCISQWGHDFRPEYCAIGELRQHLPGVPVIALTATADNTTRSDICSRLRLSDP 201
Query: 194 NIINTGFDRPNL--YLAASVKQDDIMADLRKLTNFENQFEGS-TIIYCPTKVICEKVCDV 250
I + FDRPN+ L K D +L F +G IIYC ++ E V
Sbjct: 202 LIHISSFDRPNIRYTLVEKYKAFD------QLWMFVRGQKGQCGIIYCNSRNKVEDVAAR 255
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
L + G+ YHA + QR+ + F+KD ++VVVAT AFGMGI+K +VR V H+ P+
Sbjct: 256 LQKRGLSVAAYHAGLDNSQREWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPR 315
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTAD--FTKNNMIFQPNLNDSEIQEHSKTMMKRVE 368
++ +YYQE GRAGRDG+S+ FY AD + + + +P +I++H M
Sbjct: 316 NIESYYQETGRAGRDGVSAEAVLFYDPADMAWLRRCLDEKPAGPQKDIEQHKLNAMG--- 372
Query: 369 KYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC-----RHNEMLELEQV 417
+ + +TCRR LLN+F E++ P CD C +++ ++E +Q
Sbjct: 373 AFAQAQTCRRLVLLNYF-------GENRQTPCGNCDICLDPPKQYDGLVEAQQA 419
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 155/280 (55%), Gaps = 9/280 (3%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPILAVTATATPVVIDDICTSLMLR 191
+ I IDEAHCVSQWGHDFRP Y+ L ++ P VP++A+TATAT +V D+ +L ++
Sbjct: 648 LARIVIDEAHCVSQWGHDFRPDYKALGDVVRQFPGVPVIALTATATQLVRTDVVANLGIQ 707
Query: 192 DPNIINTGFDRPNLYLAASVKQDDIMADLRKLTNFENQFEG-STIIYCPTKVICEKVCDV 250
+ F+RPNL K ++ + L + ++ G S IIYC ++ CE+V
Sbjct: 708 GCRQYSQSFNRPNLSYEVLPKGRGVIDSIADL--IKEKYTGKSGIIYCLSRKTCEQVAQK 765
Query: 251 LSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGAPK 310
LS GI+ YHA + R ++ + K+ V+VAT AFGMGIDK DVR VIH+ PK
Sbjct: 766 LSETGIRAYHYHAGMDSADRSDVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPK 825
Query: 311 DLSAYYQEIGRAGRDGLSSVCYTFYKTADFTKNNMIFQPNLNDSEIQEHSKTMMKRVEKY 370
L YYQE GRAGRDG S CY +Y AD + E ++ M++ V +Y
Sbjct: 826 SLEGYYQETGRAGRDGKRSECYLYYLYADSRILRKMIDEGEGSREQKQRLNDMLRTVVQY 885
Query: 371 LELRT-CRRKYLLNHFKGSSVTVAESQVPPDKCCDNCRHN 409
E + CRR +L +F S S+ + CDNCR +
Sbjct: 886 CENKADCRRAQVLGYF---SEAFDASKC--NNTCDNCRSD 920
>gi|429759268|ref|ZP_19291771.1| ATP-dependent DNA helicase RecQ [Veillonella atypica KON]
gi|429180133|gb|EKY21361.1| ATP-dependent DNA helicase RecQ [Veillonella atypica KON]
Length = 610
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 158/279 (56%), Gaps = 19/279 (6%)
Query: 132 IVLIAIDEAHCVSQWGHDFRPSYRCLSELRLPLPDVPIL-AVTATATPVVIDDICTSLML 190
I + +DEAHC+SQWGHDFRPSYR + + LP P++ A TATAT V +DI T L L
Sbjct: 137 ISQVIVDEAHCISQWGHDFRPSYRLIGDWLASLPKRPVVGAFTATATKAVENDIKTLLGL 196
Query: 191 RDPNIINTGFDRPNLYLAA--SVKQDDIMADLRKLTNFENQFEGSTIIYCPTKVICEKVC 248
N+ TGFDRPNL + + K+ D + D + + EN IIYC T+ E+V
Sbjct: 197 DHANVYVTGFDRPNLSFSVVRTPKRMDYVVDYVRRHSHEN-----GIIYCSTRKDVERVY 251
Query: 249 DVLSRNGIQNRPYHAHISLKQRKEIHGLFVKDLIKVVVATCAFGMGIDKPDVRCVIHYGA 308
D L+R GIQ YHA +S + RK++ + D ++V+VAT AFGMGIDK +VR V+HY
Sbjct: 252 DNLTRAGIQTGYYHAGLSDEMRKDMQNKYAFDQLQVMVATNAFGMGIDKSNVRYVLHYQM 311
Query: 309 PKDLSAYYQEIGRAGRDGLSSVCYTFYKTADF-TKNNMIFQPNLNDSEIQEHSKTMMKRV 367
P+++ +YYQE GRAGRDG + C Y D +I Q +L Q + + +
Sbjct: 312 PRNMESYYQEAGRAGRDGAPAECILLYSGQDVRVHKYLIEQGHLEPQREQVELRKLQSMI 371
Query: 368 EKYLELRTCRRKYLLNHFKGSSVTVAESQVPPDKCCDNC 406
+ Y TC RKY+L +F ++ P C NC
Sbjct: 372 D-YCFCSTCLRKYMLAYF---------GEIVPWLECSNC 400
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,214,790,254
Number of Sequences: 23463169
Number of extensions: 299079656
Number of successful extensions: 708172
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 26709
Number of HSP's successfully gapped in prelim test: 4490
Number of HSP's that attempted gapping in prelim test: 655888
Number of HSP's gapped (non-prelim): 44074
length of query: 451
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 305
effective length of database: 8,933,572,693
effective search space: 2724739671365
effective search space used: 2724739671365
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)