BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10480
         (435 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O76217|PE1_ANOGA Peritrophin-1 OS=Anopheles gambiae GN=Aper1 PE=2 SV=2
          Length = 153

 Score = 39.7 bits (91), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 26/45 (57%)

Query: 29 ADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGP 73
          A P+ C +F  C    P VS CP GL ++D +K C +  +A+C P
Sbjct: 35 AHPTDCDKFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQAQCAP 79


>sp|Q87N15|RLUC_VIBPA Ribosomal large subunit pseudouridine synthase C OS=Vibrio
           parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
           GN=rluC PE=3 SV=1
          Length = 315

 Score = 38.1 bits (87), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 142 KVFSDSRKNPNGCPMKGTFFISHEYSDYSMIQN--LANRGHEIGVET------ISLQDGL 193
           +V S  R NPNG P +  F I  ++   ++IQ   +  R H+I V T      I+  D  
Sbjct: 200 EVNSIVRVNPNGKPSETRFKILEKFEQATLIQASPITGRTHQIRVHTQYTGHPIAWDDRY 259

Query: 194 QDKGYEEWVGEMIGMREILHHFANI 218
            D+ ++ + G++ G+  +  H ANI
Sbjct: 260 GDRRFDAYTGQL-GLDRLFLHAANI 283


>sp|P29030|CHIT_BRUMA Endochitinase OS=Brugia malayi PE=1 SV=1
          Length = 504

 Score = 38.1 bits (87), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 19  CPDEGGNGNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLC 63
           CP+   +G +  P+ C  F QC ++  YV  CP+  +F+D  K+C
Sbjct: 451 CPER--DGLFPHPTDCHLFIQCANNIAYVMQCPATTFFNDAIKVC 493


>sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2
          Length = 2286

 Score = 37.7 bits (86), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 26  GNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARC 71
           G+Y     CR++Y CV+     S C   L++D IKKLC +    +C
Sbjct: 803 GDYYPHRNCRKYYICVNKALVPSECGGDLHWDGIKKLCDWPENVQC 848


>sp|Q63415|PCSK6_RAT Proprotein convertase subtilisin/kexin type 6 OS=Rattus norvegicus
           GN=Pcsk6 PE=2 SV=1
          Length = 937

 Score = 33.5 bits (75), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 6/42 (14%)

Query: 33  TCRR-FYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGP 73
           +CRR FY   + +  V+LCP+GLY D+ ++LC      RC P
Sbjct: 734 SCRRGFYHHQETNTCVTLCPAGLYADESQRLCL-----RCHP 770


>sp|Q11174|CHIT_CAEEL Probable endochitinase OS=Caenorhabditis elegans GN=cht-1 PE=1 SV=1
          Length = 617

 Score = 33.1 bits (74), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 25/47 (53%)

Query: 25  NGNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARC 71
           +G +  PS C +F +CV+   Y   CP+GL F     +C   + ++C
Sbjct: 569 DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615



 Score = 32.3 bits (72), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 21/47 (44%)

Query: 25  NGNYADPSTCRRFYQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARC 71
           +G Y + + C  F  C+    Y   CPSGL +    K CT    + C
Sbjct: 486 DGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGC 532


>sp|F1NBL0|MUC6_CHICK Mucin-6 (Fragment) OS=Gallus gallus GN=MUC6 PE=1 SV=1
          Length = 1185

 Score = 32.0 bits (71), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 38  YQCVDHHPYVSLCPSGLYFDDIKKLCTFKNEARCGPLPTTPAPITEAPTD-LATRCDKSS 96
           Y C  H  Y   CP G   DDI K  T  +  +C   P T    T AP D +   C    
Sbjct: 279 YSCSSHCTYGCFCPEGTVLDDISKNRTCVHLEQC---PCTLNGETYAPGDTMKAACRTCK 335

Query: 97  CTLPYCFCSKDGTIIPGGLDAEDTPQMILLTFDGAVNLNNYD----HYQKVFSDSRKNPN 152
           CT+             G  + ++ P     + +G   +  +D     +  V +      +
Sbjct: 336 CTM-------------GQWNCKELPCPGRCSLEGGSFVTTFDSRSYRFHGVCTYILMKSS 382

Query: 153 GCPMKGTFFISHEYSDYS 170
             P  GT    +E S YS
Sbjct: 383 SLPHNGTLMAIYEKSGYS 400


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.137    0.453 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,108,575
Number of Sequences: 539616
Number of extensions: 8444232
Number of successful extensions: 17311
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 17298
Number of HSP's gapped (non-prelim): 21
length of query: 435
length of database: 191,569,459
effective HSP length: 120
effective length of query: 315
effective length of database: 126,815,539
effective search space: 39946894785
effective search space used: 39946894785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)