RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10481
         (129 letters)



>d1usub_ d.83.2.1 (B:) Activator of Hsp90 ATPase, Aha1 {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 142

 Score = 92.2 bits (229), Expect = 9e-26
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)

Query: 29  EKNANQWSKDKIKALFLNLEIEMKTA--KVKLKDIEKCEGEAVINNRKGKLIFFYEWDIT 86
           +KN   W+K+  K   + +E          K+K +   EG+  +N RKGK+I  ++  IT
Sbjct: 2   DKNCIGWAKEYFKQKIVGVEAGSVKDKKYAKIKSVSSIEGDCEVNQRKGKVISLFDLKIT 61

Query: 87  INWTGFASGND---TEVQGKINIPNLSEENNVDEVEV 120
           +   G     D      +G IN+P ++ ++     + 
Sbjct: 62  VLIEGHVDSKDGSALPFEGSINVPEVAFDSEASSYQF 98


>d1by1a_ a.87.1.1 (A:) beta-pix {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 209

 Score = 26.2 bits (57), Expect = 1.3
 Identities = 10/63 (15%), Positives = 22/63 (34%)

Query: 22 VNNWHWTEKNANQWSKDKIKALFLNLEIEMKTAKVKLKDIEKCEGEAVINNRKGKLIFFY 81
          ++ +    + + + S   I  L  NLE      ++ ++ +E+C        R G      
Sbjct: 36 LSTYLRPLQTSEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGGCFLNL 95

Query: 82 EWD 84
             
Sbjct: 96 MPQ 98


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.133    0.421 

Gapped
Lambda     K      H
   0.267   0.0479    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 536,152
Number of extensions: 23076
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 11
Length of query: 129
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 53
Effective length of database: 1,364,116
Effective search space: 72298148
Effective search space used: 72298148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 48 (22.9 bits)