BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10482
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7TLR9|VP91_NPVCF Capsid-associated protein Vp91 OS=Choristoneura fumiferana nuclear
polyhedrosis virus GN=ORF78 PE=3 SV=1
Length = 833
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 18 SGCPEPYGVQTYPHPQLCDQFYKCTNGTLTLEQCENGLLYD 58
G P+ + + +P L ++F +C NG + QC +G ++D
Sbjct: 227 EGRPDGFVLPYFPEALLVNEFVECRNGEHVVAQCADGQVFD 267
>sp|P29030|CHIT_BRUMA Endochitinase OS=Brugia malayi PE=1 SV=1
Length = 504
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 20 CPEPYGVQTYPHPQLCDQFYKCTNGTLTLEQCENGLLYDGNGNVHNH 66
CPE G+ +PHP C F +C N + QC ++ V +H
Sbjct: 451 CPERDGL--FPHPTDCHLFIQCANNIAYVMQCPATTFFNDAIKVCDH 495
>sp|O76217|PE1_ANOGA Peritrophin-1 OS=Anopheles gambiae GN=Aper1 PE=2 SV=2
Length = 153
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 31 HPQLCDQFYKCTNGTLTLEQCENGLLYDGNGNVHNHCNYYWGVDCG 76
HP CD+F C +GT + +C GLL++ + C+Y C
Sbjct: 36 HPTDCDKFLICNHGTPVVSKCPPGLLWNDS---QKQCDYPAQAQCA 78
>sp|P41707|Y150_NPVAC Uncharacterized 11.2 kDa protein in IE1-IEN intergenic region
OS=Autographa californica nuclear polyhedrosis virus
PE=4 SV=1
Length = 99
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 22 EPYGVQTYPHPQLCDQFYKCTNGTLTLEQ-CENGLLYD 58
+P GV +PHP CD FY C LE C G +D
Sbjct: 44 KPIGVN-FPHPTRCDAFYMCVGLNQKLELICPEGFEFD 80
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1
Length = 466
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 29 YPHPQLCDQFYKCTNGTLTLEQCENGLLY 57
YP+P+ FY C G L + C GL++
Sbjct: 428 YPNPRERSSFYSCAAGRLFQQSCPTGLVF 456
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.490
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,087,851
Number of Sequences: 539616
Number of extensions: 1577890
Number of successful extensions: 2403
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2396
Number of HSP's gapped (non-prelim): 12
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)