Query psy10483
Match_columns 287
No_of_seqs 257 out of 1622
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 19:20:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10483.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10483hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dqc_A Tachycitin; disulfide-r 99.3 1.9E-12 6.6E-17 91.9 5.1 56 63-126 9-64 (74)
2 1dqc_A Tachycitin; disulfide-r 99.2 1.2E-11 4.3E-16 87.6 4.6 53 136-194 10-62 (74)
3 1wb0_A Chitinase 1, chitotrios 98.3 6.1E-08 2.1E-12 91.4 0.0 50 63-118 396-445 (445)
4 1wb0_A Chitinase 1, chitotrios 98.2 1.7E-07 5.9E-12 88.3 0.0 48 136-185 397-445 (445)
5 1hx2_A BSTI; beta-sheet disulf 35.9 49 0.0017 21.0 4.0 24 236-265 33-58 (60)
6 1xu2_R Tumor necrosis factor r 28.8 18 0.00061 22.3 0.8 18 97-117 2-19 (47)
7 2kmz_A Tumor necrosis factor r 25.2 48 0.0016 20.5 2.3 30 243-275 4-33 (53)
8 3ssb_I IMPI alpha, inducible m 23.1 39 0.0013 18.9 1.5 19 25-44 8-26 (32)
9 2kn0_A FN14; tweak, TNF recept 20.0 30 0.001 22.4 0.6 26 246-274 3-28 (66)
10 1d0d_A TAP, anticoagulant prot 16.1 64 0.0022 20.2 1.5 26 64-91 13-42 (60)
No 1
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.30 E-value=1.9e-12 Score=91.86 Aligned_cols=56 Identities=20% Similarity=0.417 Sum_probs=52.3
Q ss_pred CCCCCCCCCCCccccCCCCCCceEEecCCccCceeeCCCCCeecCCCCCcCccccCccccCCCc
Q psy10483 63 AFKCPVDKLKNSYYPDSIQCDLYYHCSDGQLVEEKLCPDGLLFDDSNPAHERCDTNVNVECGER 126 (287)
Q Consensus 63 ~~~C~~~~~~~G~~~~p~~C~~y~~C~~g~~~~~~~Cp~g~~Fd~~~~~~~~C~~~~~~~C~~~ 126 (287)
...|+. +|+++||.+|++||+|.+|.+ .++.||.||+||+. ++.|+|++++.|...
T Consensus 9 ~~~C~~----~G~~~~p~dC~~fy~C~~G~~-~~~~Cp~Gl~Fn~~---~~~Cd~p~~v~C~~~ 64 (74)
T 1dqc_A 9 YSPCLD----DGPNVNLYSCCSFYNCHKCLA-RLENCPKGLHYNAY---LKVCDWPSKAGCTSV 64 (74)
T ss_dssp GCCSSS----SEEECCSSCSSEEEEEETTEE-EEEECTTSCEEETT---TTEEECTTTTTCCSS
T ss_pred CCcCCC----CCEeCCcccCcceeECCCCcE-EEeECcCCCEEChh---hCcCcCcccCCCCCC
Confidence 467987 899999999999999999999 99999999999999 999999999999765
No 2
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.19 E-value=1.2e-11 Score=87.62 Aligned_cols=53 Identities=32% Similarity=0.708 Sum_probs=48.7
Q ss_pred CCCCCCCCeeecCCCccCcccEEcCCCceeEecCCCCCeeeCCCCCcCCCCCCCCCCCC
Q psy10483 136 KGCPRANGFFRHYDEKVCDKFVNCVDGVPNELPCPPGLIYDDSVSSCAWPSENTRKDCT 194 (287)
Q Consensus 136 ~~C~~~~G~~~~p~~~~C~~y~~C~~g~~~~~~Cp~G~~Fd~~~~~C~~~~~~~~~~C~ 194 (287)
..|+. +|+|+||.+ |++||+|.+|.++++.||.|++||+.++.|+++.++. |.
T Consensus 10 ~~C~~-~G~~~~p~d--C~~fy~C~~G~~~~~~Cp~Gl~Fn~~~~~Cd~p~~v~---C~ 62 (74)
T 1dqc_A 10 SPCLD-DGPNVNLYS--CCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG---CT 62 (74)
T ss_dssp CCSSS-SEEECCSSC--SSEEEEEETTEEEEEECTTSCEEETTTTEEECTTTTT---CC
T ss_pred CcCCC-CCEeCCccc--CcceeECCCCcEEEeECcCCCEEChhhCcCcCcccCC---CC
Confidence 35775 699999977 9999999999999999999999999999999999987 87
No 3
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=98.33 E-value=6.1e-08 Score=91.36 Aligned_cols=50 Identities=30% Similarity=0.687 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCccccCCCCCCceEEecCCccCceeeCCCCCeecCCCCCcCccccC
Q psy10483 63 AFKCPVDKLKNSYYPDSIQCDLYYHCSDGQLVEEKLCPDGLLFDDSNPAHERCDTN 118 (287)
Q Consensus 63 ~~~C~~~~~~~G~~~~p~~C~~y~~C~~g~~~~~~~Cp~g~~Fd~~~~~~~~C~~~ 118 (287)
...|+. +.+|++|||.+|++||+|.+|.. ..+.||.|++||+. .+.|+||
T Consensus 396 ~~~C~~--~~~G~~~~p~~C~~fy~C~~g~~-~~~~Cp~Gl~f~~~---~~~Cd~p 445 (445)
T 1wb0_A 396 DTFCQG--KADGLYPNPRERSSFYSCAAGRL-FQQSCPTGLVFSNS---CKCCTWN 445 (445)
T ss_dssp --------------------------------------------------------
T ss_pred CCcCCC--CCCcccCCCCCCCcccCCCCCCE-EeCCCcCCCEECcc---cCCCCCC
Confidence 467998 67899999999999999999999 99999999999999 9999985
No 4
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=98.21 E-value=1.7e-07 Score=88.26 Aligned_cols=48 Identities=29% Similarity=0.755 Sum_probs=0.0
Q ss_pred CCCCC-CCCeeecCCCccCcccEEcCCCceeEecCCCCCeeeCCCCCcCCC
Q psy10483 136 KGCPR-ANGFFRHYDEKVCDKFVNCVDGVPNELPCPPGLIYDDSVSSCAWP 185 (287)
Q Consensus 136 ~~C~~-~~G~~~~p~~~~C~~y~~C~~g~~~~~~Cp~G~~Fd~~~~~C~~~ 185 (287)
..|+. .+|++|||.+ |++||+|.+|.++.+.||.|++||+..+.|+||
T Consensus 397 ~~C~~~~~G~~~~p~~--C~~fy~C~~g~~~~~~Cp~Gl~f~~~~~~Cd~p 445 (445)
T 1wb0_A 397 TFCQGKADGLYPNPRE--RSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 445 (445)
T ss_dssp ---------------------------------------------------
T ss_pred CcCCCCCCcccCCCCC--CCcccCCCCCCEEeCCCcCCCEECcccCCCCCC
Confidence 46986 4799999977 999999999999999999999999999999986
No 5
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=35.87 E-value=49 Score=20.95 Aligned_cols=24 Identities=25% Similarity=0.551 Sum_probs=15.5
Q ss_pred eeccccceeeccCCCC--CCcccCCCcCCCCC
Q psy10483 236 ICRNGVQAQYGSCPAG--SVYNEESFKCDEPE 265 (287)
Q Consensus 236 ~C~~g~~~~~~~Cp~G--~~Fd~~~~~C~~~~ 265 (287)
.|..| =.||.| ++.+ ..+.|+.++
T Consensus 33 ~C~~G-----C~C~~Gtv~v~~-~~~~CV~~~ 58 (60)
T 1hx2_A 33 KCNQR-----CGCISGTVLKSK-DSSECVHPS 58 (60)
T ss_dssp CCCSE-----EEECTTCEESST-TCSSEECTT
T ss_pred cCCCC-----CCCCCCCeeEEC-CCCCEechh
Confidence 46665 359999 5554 257887764
No 6
>1xu2_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 2.35A {Homo sapiens} SCOP: g.24.1.2 PDB: 2kn1_A* 1oqd_K
Probab=28.75 E-value=18 Score=22.27 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=14.8
Q ss_pred eeCCCCCeecCCCCCcCcccc
Q psy10483 97 KLCPDGLLFDDSNPAHERCDT 117 (287)
Q Consensus 97 ~~Cp~g~~Fd~~~~~~~~C~~ 117 (287)
.+||...+||.. ++.|..
T Consensus 2 ~~C~~eqYwD~L---L~~C~p 19 (47)
T 1xu2_R 2 GQCSQNEYFDSL---LHACIP 19 (47)
T ss_dssp --CCTTEEEETT---TTEEEE
T ss_pred CCCcHHHHHHHH---Hhcccc
Confidence 579999999999 899985
No 7
>2kmz_A Tumor necrosis factor receptor superfamily member; FN14, tweak, TNF receptor, CRD, tnfrsf12A, angiogenesis, APO cell adhesion; NMR {Homo sapiens}
Probab=25.24 E-value=48 Score=20.47 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=22.9
Q ss_pred eeeccCCCCCCcccCCCcCCCCCCCCCCCCCCC
Q psy10483 243 AQYGSCPAGSVYNEESFKCDEPENVPGCENWFG 275 (287)
Q Consensus 243 ~~~~~Cp~G~~Fd~~~~~C~~~~~v~~C~~~~~ 275 (287)
+....||.|..|+.....|+.-. .|.++..
T Consensus 4 p~~~pC~~GsswS~DLdKCmdcs---~C~~~p~ 33 (53)
T 2kmz_A 4 PGTAPCSRGSSWSADLDKCMDCA---SCRARPH 33 (53)
T ss_dssp SSCCSSCSSCBCCTTTTCCBCST---TCSSCCC
T ss_pred CCcCcCCCCcccchhhhhhhccc---cCCCCcc
Confidence 34567999999999999998753 5766543
No 8
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=23.15 E-value=39 Score=18.92 Aligned_cols=19 Identities=11% Similarity=-0.008 Sum_probs=14.5
Q ss_pred ecCCceEeeCCCCccccccc
Q psy10483 25 EQGNYLVLSDSRRLCIRYNA 44 (287)
Q Consensus 25 ~c~~gl~fd~~~~~C~~~~~ 44 (287)
.|++|++-|. .+.|+.++.
T Consensus 8 ~C~~G~vrn~-~G~CV~~~~ 26 (32)
T 3ssb_I 8 YCEDGYARDV-NGKCIPIKD 26 (32)
T ss_dssp EECTTEEECT-TSCEEEGGG
T ss_pred CcCCCcEECC-CCCEECHHH
Confidence 4789999886 778987544
No 9
>2kn0_A FN14; tweak, TNF receptor, CRD, mutagenesis, apoptosis; NMR {Xenopus laevis}
Probab=19.98 E-value=30 Score=22.41 Aligned_cols=26 Identities=38% Similarity=0.726 Sum_probs=19.3
Q ss_pred ccCCCCCCcccCCCcCCCCCCCCCCCCCC
Q psy10483 246 GSCPAGSVYNEESFKCDEPENVPGCENWF 274 (287)
Q Consensus 246 ~~Cp~G~~Fd~~~~~C~~~~~v~~C~~~~ 274 (287)
..||.|..|++..+.|+.-. .|.++.
T Consensus 3 ~pCprGssws~dLdkCM~Cs---~C~~~p 28 (66)
T 2kn0_A 3 GECPEGRAYSQDLGKCMECS---VCKNSE 28 (66)
T ss_dssp CCCCSSEEEETTTTEEEEST---TCSSCC
T ss_pred ccCCCCcccchhHHhhcccC---cCCCCC
Confidence 46999999999999997542 455443
No 10
>1d0d_A TAP, anticoagulant protein; factor XA inhibitor, kunitz inhibitor, blood clotting inhibitor; 1.62A {Ornithodoros moubata} SCOP: g.8.1.2 PDB: 1kig_I 1tap_A 1tcp_A
Probab=16.15 E-value=64 Score=20.21 Aligned_cols=26 Identities=19% Similarity=0.646 Sum_probs=18.2
Q ss_pred CCCCCCCCCCc---cccCC-CCCCceEEecCC
Q psy10483 64 FKCPVDKLKNS---YYPDS-IQCDLYYHCSDG 91 (287)
Q Consensus 64 ~~C~~~~~~~G---~~~~p-~~C~~y~~C~~g 91 (287)
..|.. ..+| +|+|. ..|..||+|-..
T Consensus 13 ~~c~~--~e~~~~~~f~~~k~~c~~fwicpe~ 42 (60)
T 1d0d_A 13 DECDS--NEGGERAYFRNGKGGCDSFWICPED 42 (60)
T ss_dssp CCCCG--GGTCEEEEEECSSSSEEEEEECTTT
T ss_pred hhccC--CCCceEEeccCCCCCCCcceECCcc
Confidence 45776 3444 77874 789999999743
Done!