Your job contains 1 sequence.
>psy10487
MLAVVVILLAACLGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVL
DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWL
HQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALE
SLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTE
PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQV
LHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEIN
LATTLSKTDSWYMLVLGISVCVVSVIVSIGMSFCVCRAHEHKNKRRKRKGKMKQSVSFND
QEKKLLDVSITTTDRHTGSCEALGSQPDMELIEQSLAMEQPPVHITIESHAVDPQVSVFP
PPPEFSSNHLPTSTYGNIFISVSVSQEPPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAYF
ATLPRRPRSKVIEPSSLVRVGPKYDNMGPRVTAGGASILSLPDATSTEDIPSPPPPPTLC
TPLGVEYVSL
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10487
(610 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039862 - symbol:kek6 "kek6" species:7227 "Drosoph... 945 1.3e-109 3
FB|FBgn0031016 - symbol:kek5 "kekkon5" species:7227 "Dros... 596 1.5e-64 3
FB|FBgn0015400 - symbol:kek2 "kekkon-2" species:7227 "Dro... 525 4.1e-51 2
FB|FBgn0028370 - symbol:kek3 "kekkon-3" species:7227 "Dro... 508 2.5e-49 2
FB|FBgn0015399 - symbol:kek1 "kekkon-1" species:7227 "Dro... 506 1.0e-47 1
FB|FBgn0032484 - symbol:kek4 "kekkon4" species:7227 "Dros... 482 6.2e-46 1
MGI|MGI:3605040 - symbol:Lrrc24 "leucine rich repeat cont... 333 7.5e-28 1
UNIPROTKB|Q50LG9 - symbol:LRRC24 "Leucine-rich repeat-con... 331 1.2e-27 1
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 330 3.4e-27 1
UNIPROTKB|Q6WRI0 - symbol:IGSF10 "Immunoglobulin superfam... 238 2.3e-22 2
RGD|735030 - symbol:Igsf10 "immunoglobulin superfamily, m... 242 2.7e-22 2
MGI|MGI:1923481 - symbol:Igsf10 "immunoglobulin superfami... 239 1.2e-21 2
RGD|1309357 - symbol:Lrfn5 "leucine rich repeat and fibro... 278 4.5e-21 1
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 280 5.4e-21 1
FB|FBgn0011828 - symbol:Pxn "Peroxidasin" species:7227 "D... 282 5.4e-21 1
MGI|MGI:2144814 - symbol:Lrfn5 "leucine rich repeat and f... 276 7.4e-21 1
UNIPROTKB|Q96NI6 - symbol:LRFN5 "Leucine-rich repeat and ... 274 1.2e-20 1
ZFIN|ZDB-GENE-050522-160 - symbol:lrit2 "leucine-rich rep... 269 2.5e-20 1
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 273 3.1e-20 1
ZFIN|ZDB-GENE-041111-75 - symbol:lrig2 "leucine-rich repe... 268 1.1e-19 1
UNIPROTKB|F1PKU2 - symbol:PXDNL "Uncharacterized protein"... 266 2.9e-19 1
MGI|MGI:1916925 - symbol:Pxdn "peroxidasin homolog (Droso... 266 3.0e-19 1
UNIPROTKB|F1NN41 - symbol:PXDN "Uncharacterized protein" ... 264 4.7e-19 1
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 258 7.2e-19 1
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 258 7.2e-19 1
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 258 7.2e-19 1
UNIPROTKB|Q9NT99 - symbol:LRRC4B "Leucine-rich repeat-con... 258 7.2e-19 1
UNIPROTKB|F1PZW2 - symbol:LRRC4B "Uncharacterized protein... 258 7.3e-19 1
UNIPROTKB|I3LJI7 - symbol:LRRC4B "Uncharacterized protein... 258 7.4e-19 1
WB|WBGene00004854 - symbol:slt-1 species:6239 "Caenorhabd... 262 7.7e-19 1
UNIPROTKB|Q86UN2 - symbol:RTN4RL1 "Reticulon-4 receptor-l... 252 8.9e-19 1
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 254 1.1e-18 1
UNIPROTKB|Q5VT99 - symbol:LRRC38 "Leucine-rich repeat-con... 230 2.2e-18 1
ZFIN|ZDB-GENE-080723-63 - symbol:zgc:195063 "zgc:195063" ... 252 2.6e-18 1
UNIPROTKB|F1Q057 - symbol:PXDN "Uncharacterized protein" ... 256 3.5e-18 1
UNIPROTKB|E1C0J7 - symbol:PXDNL "Uncharacterized protein"... 256 3.5e-18 1
UNIPROTKB|E1C0J1 - symbol:PXDNL "Uncharacterized protein"... 256 3.5e-18 1
UNIPROTKB|I3LDA4 - symbol:PXDN "Uncharacterized protein" ... 255 4.8e-18 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 255 4.9e-18 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 253 5.4e-18 1
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 253 8.2e-18 1
MGI|MGI:1919006 - symbol:Cpn2 "carboxypeptidase N, polype... 246 8.6e-18 1
ZFIN|ZDB-GENE-090312-22 - symbol:mxra5 "matrix-remodellin... 215 1.1e-17 2
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 252 1.1e-17 1
UNIPROTKB|A1KZ92 - symbol:PXDNL "Peroxidasin-like protein... 251 1.3e-17 1
MGI|MGI:2442845 - symbol:Lrrc38 "leucine rich repeat cont... 222 1.6e-17 1
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 250 1.8e-17 1
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 249 2.3e-17 1
UNIPROTKB|Q92626 - symbol:PXDN "Peroxidasin homolog" spec... 259 2.4e-17 2
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 248 2.9e-17 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 243 3.7e-17 1
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 247 3.8e-17 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 246 4.5e-17 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 246 4.8e-17 1
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 244 5.2e-17 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 251 5.9e-17 2
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 251 6.0e-17 2
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 245 6.1e-17 1
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 245 6.2e-17 1
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 245 6.2e-17 1
UNIPROTKB|Q9ULH4 - symbol:LRFN2 "Leucine-rich repeat and ... 241 6.5e-17 1
ZFIN|ZDB-GENE-061026-3 - symbol:nyx "nyctalopin" species:... 238 8.6e-17 2
ZFIN|ZDB-GENE-080219-38 - symbol:zgc:172282 "zgc:172282" ... 238 1.1e-16 1
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 238 1.5e-16 1
ZFIN|ZDB-GENE-040310-3 - symbol:rtn4rl1b "reticulon 4 rec... 237 1.6e-16 2
RGD|1311831 - symbol:Lrfn2 "leucine rich repeat and fibro... 237 1.8e-16 1
UNIPROTKB|F1NXL1 - symbol:RTN4RL2 "Uncharacterized protei... 220 1.9e-16 1
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 236 2.0e-16 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 248 2.1e-16 2
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 248 2.1e-16 2
UNIPROTKB|F1NEZ4 - symbol:SLITRK2 "Uncharacterized protei... 236 2.5e-16 1
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 234 2.5e-16 1
UNIPROTKB|F1N5L8 - symbol:SLITRK4 "Uncharacterized protei... 236 2.5e-16 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 247 2.7e-16 2
MGI|MGI:2136810 - symbol:Lrfn1 "leucine rich repeat and f... 235 2.8e-16 1
RGD|1304707 - symbol:Lrfn1 "leucine rich repeat and fibro... 235 2.8e-16 1
UNIPROTKB|Q9GZU5 - symbol:NYX "Nyctalopin" species:9606 "... 231 2.9e-16 1
RGD|727812 - symbol:Rtn4rl1 "reticulon 4 receptor-like 1"... 230 2.9e-16 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 249 3.2e-16 2
ZFIN|ZDB-GENE-040426-1227 - symbol:mb21d2b "Mab-21 domain... 239 3.3e-16 2
UNIPROTKB|G3N218 - symbol:G3N218 "Uncharacterized protein... 229 4.7e-16 1
UNIPROTKB|F1P1D7 - symbol:F1P1D7 "Uncharacterized protein... 227 4.9e-16 1
UNIPROTKB|F1MMM6 - symbol:SLIT3 "Uncharacterized protein"... 236 5.0e-16 1
RGD|2336 - symbol:Chad "chondroadherin" species:10116 "Ra... 224 5.3e-16 1
UNIPROTKB|E1C125 - symbol:SLITRK4 "Uncharacterized protei... 233 5.4e-16 1
RGD|1561300 - symbol:Nyx "nyctalopin" species:10116 "Ratt... 228 6.0e-16 1
UNIPROTKB|B3KTY4 - symbol:SLITRK2 "cDNA FLJ38959 fis, clo... 231 7.0e-16 1
UNIPROTKB|G3N2N1 - symbol:SLITRK2 "Uncharacterized protei... 232 7.1e-16 1
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 229 8.0e-16 1
MGI|MGI:2661375 - symbol:Rtn4rl1 "reticulon 4 receptor-li... 226 8.2e-16 1
UNIPROTKB|Q8IW52 - symbol:SLITRK4 "SLIT and NTRK-like pro... 231 9.0e-16 1
UNIPROTKB|Q9H5Y7 - symbol:SLITRK6 "SLIT and NTRK-like pro... 231 9.0e-16 1
UNIPROTKB|Q9H156 - symbol:SLITRK2 "SLIT and NTRK-like pro... 231 9.1e-16 1
UNIPROTKB|F1RQ61 - symbol:SLITRK2 "Uncharacterized protei... 231 9.2e-16 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 232 1.0e-15 1
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 233 1.1e-15 1
UNIPROTKB|Q86UN3 - symbol:RTN4RL2 "Reticulon-4 receptor-l... 224 1.1e-15 1
UNIPROTKB|F1RQ64 - symbol:LOC100525800 "Uncharacterized p... 230 1.2e-15 1
RGD|1561361 - symbol:Slitrk2 "SLIT and NTRK-like family, ... 230 1.2e-15 1
MGI|MGI:2679449 - symbol:Slitrk2 "SLIT and NTRK-like fami... 230 1.2e-15 1
WARNING: Descriptions of 674 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0039862 [details] [associations]
symbol:kek6 "kek6" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0046331 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 EMBL:BT100194
RefSeq:NP_651880.1 UniGene:Dm.24119 SMR:Q9V9V6
EnsemblMetazoa:FBtr0085821 GeneID:43729 KEGG:dme:Dmel_CG1804
UCSC:CG1804-RA CTD:43729 FlyBase:FBgn0039862 eggNOG:NOG238103
InParanoid:Q9V9V6 OMA:MGRRITA OrthoDB:EOG4S1RQ2 GenomeRNAi:43729
NextBio:835480 Uniprot:Q9V9V6
Length = 836
Score = 945 (337.7 bits), Expect = 1.3e-109, Sum P(3) = 1.3e-109
Identities = 206/474 (43%), Positives = 278/474 (58%)
Query: 12 CL-GTTGSPDWT-DCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISY 69
CL T + DW+ C C CKWT GKKSA+C T +P+TL +++QVL LN+N I Y
Sbjct: 24 CLVAWTVADDWSLSCASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDNHIPY 83
Query: 70 LTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGND 129
L +E F ++GLLNLQRIYLK S ++ +H+++F+ L ILVE+DLSDN++ L +DTF+GND
Sbjct: 84 LNREEFSTLGLLNLQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGND 143
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
RL++LYLNGNP+ L A QFP LP+L+T+++ C I + +L +L LE LNL N L
Sbjct: 144 RLRILYLNGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLKNNLL 203
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHW 249
+ LSE VF NLKTLSL+ NPW C+C LR FR W + S+L S L C P + + W
Sbjct: 204 ESLSEYVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVSLVCKGPPAQKDRTW 263
Query: 250 DDVKAQEFACPPNVTIKESMVIR--EAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFD 307
D V + F CPP V I + ++ + G N T SC VYGDP P + W LNG++L N +
Sbjct: 264 DSVDDELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEVAWELNGKILDNDN-- 321
Query: 308 LLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSK 367
+L E E A + ++T+FNVT LDAG Y C N G+ + IS+ L EI + L K
Sbjct: 322 VLFESESIASDKLWSNLTVFNVTSLDAGTYACTGSNSIGSMTQNISIYLSEI-VQHVLEK 380
Query: 368 TDS--WYM-LVLGXXXXXXXXXXXXGMSFCVC----RAHEHXXXXXXXXXXXXQSVSFND 420
T WY L++G + C+C R H H SVSFND
Sbjct: 381 TPETFWYFGLIMGIFGTVFLLISISFV-VCLCKRTTRQHRHANKAGVKS-----SVSFND 434
Query: 421 QEKKLLDVSITTTDRHTGSCEALGSQPD---MELIEQS-LAMEQPPVHITIESH 470
QEKKLLD S+TTT G + +QP M + + + Q +H +ESH
Sbjct: 435 QEKKLLDSSVTTTTNDRGDSYGIDNQPTSIGMNKGDSAGMGFNQIEIH-AVESH 487
Score = 104 (41.7 bits), Expect = 1.3e-109, Sum P(3) = 1.3e-109
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 488 NHLPTSTYG-NIFISVSVSQEP-PGSDPPKYPDLIDMPHRSVSV---GTGPGTNP-AYFA 541
N +P +G NIFI VSV+Q+ G+D YPDL+++P R V G G P FA
Sbjct: 561 NIVPNPAFGGNIFIRVSVTQDMLDGADLNMYPDLLNIPKRMQDVQESGAGAVAVPEGQFA 620
Query: 542 TLPR 545
TLPR
Sbjct: 621 TLPR 624
Score = 68 (29.0 bits), Expect = 1.3e-109, Sum P(3) = 1.3e-109
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 562 PKYDNMGPRVTAGGA---SILSLPDATSTED 589
PKYDNMG R+TA G S LSL D E+
Sbjct: 763 PKYDNMGRRITASGGLGGSNLSLHDEERYEN 793
>FB|FBgn0031016 [details] [associations]
symbol:kek5 "kekkon5" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030510 "regulation of BMP signaling pathway" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030510 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:Q10466 FlyBase:FBgn0031016
EMBL:BT023770 RefSeq:NP_001245746.1 RefSeq:NP_573382.1
RefSeq:NP_728242.1 RefSeq:NP_728243.1 UniGene:Dm.33776 SMR:Q9VWI6
MINT:MINT-297003 EnsemblMetazoa:FBtr0074707
EnsemblMetazoa:FBtr0074708 EnsemblMetazoa:FBtr0309223
EnsemblMetazoa:FBtr0309224 GeneID:32930 KEGG:dme:Dmel_CG12199
UCSC:CG12199-RA CTD:32930 InParanoid:Q9VWI6 OMA:YDNLGLR
GenomeRNAi:32930 NextBio:781084 Uniprot:Q9VWI6
Length = 931
Score = 596 (214.9 bits), Expect = 1.5e-64, Sum P(3) = 1.5e-64
Identities = 129/371 (34%), Positives = 193/371 (52%)
Query: 15 TTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA 74
T G+ DW TC C+W GKKSA CK+ T +P + +++QVLD +N+I L +E
Sbjct: 33 TAGTTDWMQSCGTCHCQWNSGKKSADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREE 92
Query: 75 FKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVL 134
F GL N+ +I+L+N I+EVHR+ FK L IL+E+DLS N+I LH TF G ++L+ +
Sbjct: 93 FLLAGLPNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNV 152
Query: 135 YLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE 194
+N N I L F L +L IE ++ ++ V AL +++L NRL HL +
Sbjct: 153 IINNNEIEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHK 212
Query: 195 SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKA 254
F L LSL GN W C C L+ FR++ + +LY+ P C EP L+ K W +V +
Sbjct: 213 ETFKDLQKLMHLSLQGNAWNCSCELQDFRDFAISKRLYTPPTDCQEPPQLRGKLWSEVPS 272
Query: 255 QEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHN--------SSF 306
+ FAC P + I N+++ C + G P P + W+ N + L +S
Sbjct: 273 ENFACRPRILGSVRSFIEANHDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSV 332
Query: 307 DLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLS 366
+ + E+ L + + + V D G YTC A+N G A E L L + A +S
Sbjct: 333 EQMPEQPSQVLTSE---LRIVGVRASDKGAYTCVADNRGGRAEAEFQL-LVSGDYAGAVS 388
Query: 367 KTDSWYMLVLG 377
+D M +G
Sbjct: 389 ASDGMGMGAIG 399
Score = 65 (27.9 bits), Expect = 1.5e-64, Sum P(3) = 1.5e-64
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 562 PKYDNMGPRVTAGGASILSL 581
P YDN+G R TAGG S L+L
Sbjct: 750 PVYDNLGLRTTAGGNSTLNL 769
Score = 43 (20.2 bits), Expect = 1.5e-64, Sum P(3) = 1.5e-64
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 528 SVGTGPGTNPAYFATLPRRPRSKVIEPSS 556
S TG Y T+PR+PR+ PS+
Sbjct: 686 SPATGVVMKQGYM-TIPRKPRAPSWAPST 713
>FB|FBgn0015400 [details] [associations]
symbol:kek2 "kekkon-2" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:Q9BZR6
GeneTree:ENSGT00700000104028 FlyBase:FBgn0015400 EMBL:BT120011
RefSeq:NP_523551.1 UniGene:Dm.2402 SMR:Q9VKG1 MINT:MINT-1619269
STRING:Q9VKG1 EnsemblMetazoa:FBtr0080252 GeneID:34582
KEGG:dme:Dmel_CG4977 UCSC:CG4977-RA CTD:34582 InParanoid:Q9VKG1
OMA:DSPDEGY GenomeRNAi:34582 NextBio:789152 Uniprot:Q9VKG1
Length = 894
Score = 525 (189.9 bits), Expect = 4.1e-51, Sum P(2) = 4.1e-51
Identities = 118/342 (34%), Positives = 179/342 (52%)
Query: 25 PDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQ 84
P+ C CKW GK++ C + LP +D QVL+ + N + L E F + LLNLQ
Sbjct: 22 PEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQVLQSERFLRMDLLNLQ 81
Query: 85 RIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITEL 144
+IYL + + +H F+ LT LVE+DLS+N + + +TF L L L+GNPI EL
Sbjct: 82 KIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSSLMRLSLSGNPIREL 141
Query: 145 RAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLK 204
+ F L +L T+EL +CQ+ + +A + + LE L L+GNR+ + + P +L
Sbjct: 142 KTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGFIQGTHILPK-SLH 200
Query: 205 TLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS----CTEPGMLQTKHWDDVKAQEFACP 260
+SL N W CDC L WL+ Y+ PL+ C EP L+ + ++ ++ AC
Sbjct: 201 GISLHSNRWNCDCRLLDIHFWLVN---YNTPLAEEPKCMEPARLKGQVIKSLQREQLACL 257
Query: 261 PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSS-------FDLLEEEE 313
P V+ + S G N++++C V PEP +LWL NGQV+ N S + ++E
Sbjct: 258 PEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLFNGQVMSNDSLMDNLHMYYYIDETI 317
Query: 314 G-DALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
G EK I ++NV D G ++C +NI G +L
Sbjct: 318 GVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTL 359
Score = 37 (18.1 bits), Expect = 4.1e-51, Sum P(2) = 4.1e-51
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 529 VGTGPGTNP 537
+GTGPG+ P
Sbjct: 511 MGTGPGSPP 519
>FB|FBgn0028370 [details] [associations]
symbol:kek3 "kekkon-3" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005887 "integral
to plasma membrane" evidence=ISM] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
GeneTree:ENSGT00700000104028 KO:K07523 HSSP:P13596 EMBL:BT044530
RefSeq:NP_001162986.1 RefSeq:NP_523575.1 UniGene:Dm.21548
SMR:Q9V430 IntAct:Q9V430 MINT:MINT-324955
EnsemblMetazoa:FBtr0080752 EnsemblMetazoa:FBtr0300848 GeneID:34912
KEGG:dme:Dmel_CG4192 UCSC:CG4192-RA CTD:34912 FlyBase:FBgn0028370
InParanoid:Q9V430 OMA:KMKETCD OrthoDB:EOG4P2NH5 GenomeRNAi:34912
NextBio:790842 Uniprot:Q9V430
Length = 1021
Score = 508 (183.9 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 104/285 (36%), Positives = 154/285 (54%)
Query: 23 DCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
+CP C CKW GK+S LC +AN T +P LD+ Q+LDL+ N+I + ++F + LLN
Sbjct: 78 ECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLN 137
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
LQ++YL +R + R F+ L LVE+DLS N ++ + L+ L L+GNPI
Sbjct: 138 LQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPIL 197
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL-TALESLNLNGNRLKHLSESVFFPTP 201
+ F +P L +EL C++ + A L ++LE L L+GNRL +
Sbjct: 198 RVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLA 257
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSH-PLSCTEPGMLQTKHWDDVKAQEFACP 260
+L L L N W C C LR R W+L+ + S P +C P L + WD + +FAC
Sbjct: 258 SLHGLELARNTWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPRLSGRAWDKLDVDDFACV 317
Query: 261 PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSS 305
P + ++ G N+TMSCYV G P+P + WLL +++ N S
Sbjct: 318 PQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLS 362
Score = 263 (97.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 72/224 (32%), Positives = 106/224 (47%)
Query: 147 GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTL 206
G P+L L+ + + I +V A + ++LE L L+GNRL + +L L
Sbjct: 205 GHVPQLVKLELSDCRLSHI-AVRAFAGLE-SSLEWLKLDGNRLSEVRSGTITSLASLHGL 262
Query: 207 SLDGNPWCCDCHLRSFRNWLLKSKLYSH-PLSCTEPGMLQTKHWDDVKAQEFACPPNVTI 265
L N W C C LR R W+L+ + S P +C P L + WD + +FAC P +
Sbjct: 263 ELARNTWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPRLSGRAWDKLDVDDFACVPQIVA 322
Query: 266 KESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSF----DLLEEEEGDALFE-- 319
++ G N+TMSCYV G P+P + WLL +++ N S D E A +
Sbjct: 323 TDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGGDGDSDSEPRTAAATQGR 382
Query: 320 KSVSITLF----NVTDL-----DAGEYTCYAENIRGNASGEISL 354
K+ + + N+T L DAG YTC AEN G ++L
Sbjct: 383 KTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKVEASVTL 426
Score = 42 (19.8 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 488 NHLPTSTYGNIFISVSVSQEPPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAY 539
NH ++F S QE D YPDL+D+ +V+ G Y
Sbjct: 697 NHPADEMATSVFCSEG--QESDLFDS-NYPDLLDIAKYAVAQAQQEGRGQGY 745
>FB|FBgn0015399 [details] [associations]
symbol:kek1 "kekkon-1" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0048477
"oogenesis" evidence=IMP] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway"
evidence=IGI;IMP;TAS] [GO:0005154 "epidermal growth factor receptor
binding" evidence=IPI] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=IDA;TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0048019 "receptor
antagonist activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0022008 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0048477 GO:GO:0000910 GO:GO:0048019 InterPro:IPR013098
Pfam:PF07679 MEROPS:I43.001 GO:GO:0007175 HSSP:P07359 EMBL:U42767
ProteinModelPortal:P91643 SMR:P91643 STRING:P91643 PRIDE:P91643
FlyBase:FBgn0015399 InParanoid:P91643 OrthoDB:EOG48932C
ArrayExpress:P91643 Bgee:P91643 Uniprot:P91643
Length = 880
Score = 506 (183.2 bits), Expect = 1.0e-47, P = 1.0e-47
Identities = 120/342 (35%), Positives = 175/342 (51%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
C C CKW GK++ C D + +P +D + QVLD++ NK+ L+ E F LLNL
Sbjct: 90 CQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANLLNL 149
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGN-DRLKVLYLNGNPIT 142
Q++YL+N I E+ R+TFK LT LVE+DLS N + + LG+ L+ L L N I
Sbjct: 150 QKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTV-PSLALGHIPSLRELTLASNHIH 208
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
++ + F P L ++L HC I ++ A L L L LNGN+L L
Sbjct: 209 KIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSR 268
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS--CTE-PGMLQTKHWDDVKAQEFAC 259
L + L NPW CDC LR + WL+K + +P++ C+ P + + + D+ EFAC
Sbjct: 269 LHGIELHDNPWLCDCRLRDTKLWLMKRNI-PYPVAPVCSGGPERIIDRSFADLHVDEFAC 327
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVL-HNSSFD------LLEEE 312
P + V G N +++C P I W NG++L +NS+F +LE+
Sbjct: 328 RPEMLPISHYVEAAMGENASITCRARAVPAANINWYWNGRLLANNSAFTAYQRIHMLEQV 387
Query: 313 EGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
EG FEK + L N + D+ E+ C AEN G A +L
Sbjct: 388 EGG--FEKRSKLVLTNAQETDSSEFYCVAENRAGMAEANFTL 427
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 103/292 (35%), Positives = 162/292 (55%)
Query: 16 TGSPDWT-DCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA 74
+ S DW DC + C CKW GKK+A C++ + + +P L ++QVLDL++N I YL + A
Sbjct: 33 SASADWLLDCGN-CHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEENA 91
Query: 75 FKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVL 134
F + L NLQ++ ++N ++ +++ +F L IL+E+DLS+N + L + F +++ +
Sbjct: 92 FLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAI 151
Query: 135 YLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE 194
+LNGN + LR G F L YL IEL+ ++ S+ A + + L + L+ N L L
Sbjct: 152 FLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRV 211
Query: 195 SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKA 254
F L LSL NPW C C L+ FR++++ LY+ P SC P L+ + W + +
Sbjct: 212 ESFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMNLYTPPTSCHYPLQLRGRLWIEDQP 271
Query: 255 QEFACPPNVTIKE-SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSS 305
+ FAC P + S I + NVT+ C V+G P I W QV + S
Sbjct: 272 EAFACKPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQVYESRS 323
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 333 (122.3 bits), Expect = 7.5e-28, P = 7.5e-28
Identities = 98/343 (28%), Positives = 156/343 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P T CP CRC + C +P + Q L L +N I++L + + +
Sbjct: 26 PRATGCPAACRCY----SATVECGALRLRVVPPGIPPGTQTLFLQDNSIAHLEQGSLAPL 81
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L + +YL N+ +R + F+ L+E+ L+ N++ L F+G +L+VLYL G
Sbjct: 82 AAL--RHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAG 139
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N + +L F LP L+ + LQ I + AL L++L L+L+ N+L +S+
Sbjct: 140 NQLAKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISKEALQ 199
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKS--KLYSH---PLSCTEPGMLQTKHWDDVK 253
P +L+ L L NPW CDC L +W+ + +L S ++C EP L + +V
Sbjct: 200 PLSSLQVLRLTENPWRCDCALHWLGSWIKEGGRRLLSSRDKKITCAEPPRLALQSLLEVS 259
Query: 254 AQEFAC-PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEE 312
C PP+V ++ G ++ ++C G P+P ++W Q + E
Sbjct: 260 GGSLICIPPSVNVEPPEFTANLGEDLQVACQASGYPQPLVVWRKVPQPRDGKPQAQAQLE 319
Query: 313 EG-DALFEKSVSIT----LF--NVTDLDAGEYTCYAENIRGNA 348
G L T LF N+T AG+Y C A N G A
Sbjct: 320 GGAPGLGGHGTRDTGSGMLFLTNITLAHAGKYECEAANAGGKA 362
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 331 (121.6 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 100/338 (29%), Positives = 151/338 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC + C +P + Q L L +N I+ L A + L
Sbjct: 23 CPAACRCY----SATVECGALRLRVVPLGIPPGTQTLFLQDNNIARLEPGALAPLAAL-- 76
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+R+YL N+ +R + F+ L+E+ L+ N++ L F+G +L+VLYL GN +
Sbjct: 77 RRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGNQLAR 136
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F LP L+ + LQ I + AL L++L L+L+ N+L +S P +L
Sbjct: 137 LLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISREALQPLASL 196
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKS--KLYS---HPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L NPW CDC L W+ + +L + + C EP L + DV
Sbjct: 197 QVLRLTENPWRCDCALHWLGAWIKEGGQRLLTSRDRKIMCAEPPRLALQSLLDVSHSSLI 256
Query: 259 C-PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGD-A 316
C PP+V ++ + G ++ ++C G P+P + W Q + E G
Sbjct: 257 CIPPSVHVQPLELTANLGEDLRVACQASGYPQPLVTWRKVPQPREGRPRAQAQLEGGLLG 316
Query: 317 LFEKSVSIT----LF--NVTDLDAGEYTCYAENIRGNA 348
L S S T LF N+T AG+Y C A N G A
Sbjct: 317 LGGHSASDTGSGMLFLSNITLAHAGKYECEASNAGGAA 354
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 330 (121.2 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 83/277 (29%), Positives = 134/277 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC ++L + C +P + Q + L +N I + + +G L+
Sbjct: 24 CPSGCRC-YSL---TVECGSIGIKEIPQGITQGTQTIFLQDNAIGQIRQRDLSDLGQLHY 79
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+YL+N+ I + F+ L +L+E+ L+ N+I + D F G D L++LYL GN I
Sbjct: 80 --LYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGNQINR 137
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F L L+ + LQ + + AL+ L++L L+L+ N L+ LS + P +L
Sbjct: 138 LEDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNNLRTLSPASLKPLVSL 197
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKS--KLYSHP---LSCTEPGMLQTKHWDDVKAQEFA 258
+ L + NPW CDC L R W+ + +L S + C EP L +V
Sbjct: 198 QVLRVTDNPWRCDCALHWLRGWINEEGQRLLSSAERRMLCAEPPRLSHLSLVEVPPNSLV 257
Query: 259 C-PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILW 294
C PP V ++ S + G ++ +SC G P+P + W
Sbjct: 258 CIPPVVQLEPSHLTVRLGESLRVSCQASGYPQPQVTW 294
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 75/320 (23%), Positives = 126/320 (39%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L LN N+I +T + F+ GL +L+ +YL + I + TF+ L L E+ L +N +
Sbjct: 104 LALNGNRIHLITADVFR--GLDHLRILYLAGNQINRLEDYTFRGLQRLQELHLQENVLEV 161
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L +G L +L L+ N + L L L+ + + + D +H
Sbjct: 162 LGDQALVGLSSLALLDLSRNNLRTLSPASLKPLVSLQVLRVTD---NPWRCDCALHWLR- 217
Query: 180 ESLNLNGNRLKHLSESVFF--PTPNLKTLSL---DGNPWCCDCHLRSFRNWLLKSKL-YS 233
+N G RL +E P L LSL N C + L +L S
Sbjct: 218 GWINEEGQRLLSSAERRMLCAEPPRLSHLSLVEVPPNSLVCIPPVVQLEPSHLTVRLGES 277
Query: 234 HPLSCTEPGMLQTK-HWDDVKAQEFACPPNVTIKE-SMVIREAGGNVTMSCYVYGDPEPT 291
+SC G Q + W + P ++E M G ++ G P+
Sbjct: 278 LRVSCQASGYPQPQVTWRKASHGKAQLSPRGLVQEVGMDGDTRNGGRLVTARPGGKGGPS 337
Query: 292 ILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGE 351
+ G + + + + G + + L NVT AG Y C A N G A
Sbjct: 338 SHGPIRGGADDGADRENFDPDTGSGM------LFLSNVTVAHAGRYECEAWNPGGVA--R 389
Query: 352 ISLDLPEINLATTLSKTDSW 371
++ L +N++++ S+++ W
Sbjct: 390 VTFHL-SVNMSSSSSRSEIW 408
>UNIPROTKB|Q6WRI0 [details] [associations]
symbol:IGSF10 "Immunoglobulin superfamily member 10"
species:9606 "Homo sapiens" [GO:0001503 "ossification"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0007275 GO:GO:0005576 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 HSSP:Q9BZR6 EMBL:AY273815 EMBL:AK093069 EMBL:AK098838
EMBL:BC031063 IPI:IPI00183913 IPI:IPI00478293 IPI:IPI00795608
RefSeq:NP_001171616.1 RefSeq:NP_001171617.1 RefSeq:NP_849144.2
UniGene:Hs.741587 ProteinModelPortal:Q6WRI0 SMR:Q6WRI0
STRING:Q6WRI0 PhosphoSite:Q6WRI0 DMDM:74749492 PaxDb:Q6WRI0
PRIDE:Q6WRI0 Ensembl:ENST00000282466 GeneID:285313 KEGG:hsa:285313
UCSC:uc011bob.2 UCSC:uc011boc.2 UCSC:uc011bod.2 CTD:285313
GeneCards:GC03M151143 HGNC:HGNC:26384 HPA:HPA012921
neXtProt:NX_Q6WRI0 PharmGKB:PA134900760 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 InParanoid:Q6WRI0
OMA:PYVSEDG OrthoDB:EOG45MN4F PhylomeDB:Q6WRI0 GenomeRNAi:285313
NextBio:95425 ArrayExpress:Q6WRI0 Bgee:Q6WRI0 CleanEx:HS_IGSF10
Genevestigator:Q6WRI0 Uniprot:Q6WRI0
Length = 2623
Score = 238 (88.8 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 64/223 (28%), Positives = 106/223 (47%)
Query: 12 CLGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLT 71
CL T P CP C C C T++P ++ +++ ++L N + L
Sbjct: 19 CLVAT--PGGKACPRRCACYMPT---EVHCTFRYLTSIPDSIPPNVERINLGYNSLVRLM 73
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F GL L+ + L ++GI + TF L L + +S N++ L +DTF G L
Sbjct: 74 ETDFS--GLTKLELLMLHSNGIHTIPDKTFSDLQALQVLKMSYNKVRKLQKDTFYGLRSL 131
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALES--------LN 183
L+++ N I + F L +L+ + L+ Q+ +H D + L+ L+ L
Sbjct: 132 TRLHMDHNNIEFINPEVFYGLNFLRLVHLEGNQLTKLHPDTFVSLSYLQIFKISFIKFLY 191
Query: 184 LNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
L+ N L L + + P+L +L L GNPW CDCHL+ +W+
Sbjct: 192 LSDNFLTSLPQEMVSYMPDLDSLYLHGNPWTCDCHLKWLSDWI 234
Score = 115 (45.5 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 273 EAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL 332
+AG + C V GDP+P I WLL + + S D F + S+T+ V L
Sbjct: 2154 KAGDTAVLDCEVTGDPKPKIFWLLPSNDMISFSIDRYT-------FHANGSLTINKVKLL 2206
Query: 333 DAGEYTCYAENIRGNASGEISLDL 356
D+GEY C A N G+ + LD+
Sbjct: 2207 DSGEYVCVARNPSGDDTKMYKLDV 2230
Score = 104 (41.7 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 29/113 (25%), Positives = 47/113 (41%)
Query: 238 CTEPGMLQTKHWDDVKAQEFACPPNVTIKESMVIR-EAGGNVTMSCYVYGDPEPTILWLL 296
C+ + T H V + PP + + + I +G V + C G P PT+ W+L
Sbjct: 1723 CSASNLFGTDHLH-VTLSVVSYPPRILERRTKEITVHSGSTVELKCRAEGRPSPTVTWIL 1781
Query: 297 NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
Q + + S + A+ ++ L N++ D G Y C A N G S
Sbjct: 1782 ANQTVVSES----SQGSRQAVVTVDGTLVLHNLSIYDRGFYKCVASNPGGQDS 1830
Score = 93 (37.8 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 270 VIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNS--SFDLLEEEEGDALFEKSVSITL 326
++ + G + ++C V G+P P I+W+L NG N S+ L G + K+
Sbjct: 2347 IVAQLGKSTALNCSVDGNPPPEIIWILPNGTRFSNGPQSYQYLIASNGSFIISKT----- 2401
Query: 327 FNVTDLDAGEYTCYAENIRGNASGEISLDL 356
T DAG+Y C A N G + L++
Sbjct: 2402 ---TREDAGKYRCAARNKVGYIEKLVILEI 2428
Score = 89 (36.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 31/115 (26%), Positives = 47/115 (40%)
Query: 232 YSHPLSCTEPG--MLQTKH-WDDVKAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDP 288
YS T P M KH W + N ++ ++++ GG V ++C GDP
Sbjct: 452 YSSDAQITLPRAEMRPVKHKWTMISRDN-----NTKLEHTVLV---GGTVGLNCPGQGDP 503
Query: 289 EPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
P + WLL + + E+G L +KS + L D G Y C + N
Sbjct: 504 TPHVDWLLADGSKVRAPY---VSEDGRILIDKSGKLELQMADSFDTGVYHCISSN 555
Score = 88 (36.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 252 VKAQEFACPPNVTIKESMVIREAGG-NVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLE 310
VK Q A PP + + VI G ++ + C G P+P++ W+L+ + L+
Sbjct: 1833 VKIQVIAAPPVILEQRRQVIVGTWGESLKLPCTAKGTPQPSVYWVLSD----GTEVKPLQ 1888
Query: 311 EEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPE 358
+ ++ + N+ D G Y C A + G+ + L + E
Sbjct: 1889 FTNSKLFLFSNGTLYIRNLASSDRGTYECIATSSTGSERRVVMLTMEE 1936
Score = 84 (34.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHNS--SFDLLEEEEGDALFEKSVSITLFNVTD 331
G + + C G P P I W L +G +++N+ + D LF FN
Sbjct: 2053 GKDFQVDCKASGSPVPEISWSLPDGTMINNAMQADDSGHRTRRYTLFNNGT--LYFNKVG 2110
Query: 332 L-DAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTD 369
+ + G+YTCYA+N G E+ + L I A + +++
Sbjct: 2111 VAEEGDYTCYAQNTLGK--DEMKVHLTVITAAPRIRQSN 2147
Score = 81 (33.6 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 258 ACPPNVTIKESM-VIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDA 316
A PP +T + ++ G + C G P+P I W + L +++ E G
Sbjct: 2525 AYPPRITNRPPRSIVTRTGAAFQLHCVALGVPKPEITWEMPDHSLLSTASK--ERTHGSE 2582
Query: 317 LFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
++ + N D+G Y C A+N G+
Sbjct: 2583 QLHLQGTLVIQNPQTSDSGIYKCTAKNPLGS 2613
Score = 76 (31.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE-KSVSITLFNVTDLD 333
G + ++C G+P+P I+W L + + + + G + + S+ + +VT+ D
Sbjct: 1956 GDKLLLNCSATGEPKPQIMWRLPSKAVVDQ-----QHRVGSWIHVYPNGSLFIGSVTEKD 2010
Query: 334 AGEYTCYAENIRGN 347
+G Y C A N G+
Sbjct: 2011 SGVYLCVARNKMGD 2024
Score = 74 (31.1 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQ-VLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + + C+ G P+ +I W++ G VL+ SS D G ++ + VT D
Sbjct: 588 GETLDLPCHSTGIPDASISWVIPGNNVLYQSSRDKKVLNNG--------TLRILQVTPKD 639
Query: 334 AGEYTCYAENIRG 346
G Y C A N G
Sbjct: 640 QGYYRCVAANPSG 652
Score = 70 (29.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 274 AGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL 332
+G ++++ C G P+P I W + +G V+ + G + + ++ + T
Sbjct: 2446 SGESLSLHCVSDGIPKPNIKWTMPSGYVVDRPQIN------GKYILHDNGTLVIKEATAY 2499
Query: 333 DAGEYTCYAENIRGN 347
D G Y C A+N G+
Sbjct: 2500 DRGNYICKAQNSVGH 2514
Score = 70 (29.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 26/109 (23%), Positives = 47/109 (43%)
Query: 249 WDDVKAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDL 308
+D + F P V K + A + + C G+P PTI W +V S DL
Sbjct: 1637 FDSLSRYIFEKPRIVGGKAASFTIPANSDAFLPCEAVGNPLPTIHWT---RV--PSGLDL 1691
Query: 309 LEEEEGDAL-FEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
+ ++ + + ++++ V D G+Y C A N+ G ++L +
Sbjct: 1692 SKRKQNSRVQVLPNGTLSIQRVEIQDRGQYLCSASNLFGTDHLHVTLSV 1740
Score = 66 (28.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 19/99 (19%), Positives = 45/99 (45%)
Query: 262 NVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDAL-FEK 320
N T+ ++ +R + + C G P P ++W++ + + + G + K
Sbjct: 2243 NRTVIKATAVRHSKKH--FDCRAEGTPSPEVMWIMPDNIFLTAPY------YGSRITVHK 2294
Query: 321 SVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEI 359
+ ++ + NV D+ ++ C A N G + + L++ E+
Sbjct: 2295 NGTLEIRNVRLSDSADFICVARNEGGESVLVVQLEVLEM 2333
>RGD|735030 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10116 "Rattus norvegicus" [GO:0001503 "ossification"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042246
"tissue regeneration" evidence=IDA] InterPro:IPR007110
PROSITE:PS50835 RGD:735030 GO:GO:0007275 GO:GO:0005576
GO:GO:0030154 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042246 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0001503 HSSP:Q9BZR6 CTD:285313 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 OrthoDB:EOG45MN4F
EMBL:AY273816 IPI:IPI00400618 RefSeq:NP_942063.1 UniGene:Rn.205647
ProteinModelPortal:Q6WRH9 STRING:Q6WRH9 PhosphoSite:Q6WRH9
PRIDE:Q6WRH9 GeneID:310448 KEGG:rno:310448 UCSC:RGD:735030
InParanoid:Q6WRH9 NextBio:662025 ArrayExpress:Q6WRH9
Genevestigator:Q6WRH9 Uniprot:Q6WRH9
Length = 2597
Score = 242 (90.2 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 66/223 (29%), Positives = 107/223 (47%)
Query: 12 CLGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLT 71
CL T P CP C C C T++P + ++++ ++L N ++ LT
Sbjct: 19 CLVVT--PGSRACPRRCAC---YVPTEVHCTFRYLTSIPDGIPANVERINLGYNSLTRLT 73
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F GL L+ + L ++GI V TF L L + +S N++ + +DTF G L
Sbjct: 74 ENDFD--GLSKLELLMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIRKDTFYGLGSL 131
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALES--------LN 183
L+L+ N I + F L L+ + L+ ++ +H D + L+ L+ L
Sbjct: 132 VRLHLDHNNIEFINPEAFYGLTSLRLVHLEGNRLTKLHPDTFVSLSYLQIFKTSFIKYLF 191
Query: 184 LNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
L+ N L L + + PNL++L L GNPW CDCHL+ W+
Sbjct: 192 LSDNFLTSLPKEMVSYMPNLESLYLHGNPWTCDCHLKWLSEWM 234
Score = 110 (43.8 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 266 KESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSIT 325
K +M +R AG + C V G+P+P + WLL + + S D F + +++
Sbjct: 2122 KTTMRLR-AGETAVLDCEVTGEPKPNVFWLLPSNNVISFSNDRFT-------FHANRTLS 2173
Query: 326 LFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
+ V LD+G+Y C A+N G+ + LD+
Sbjct: 2174 IHKVKPLDSGDYVCVAQNPSGDDTKTYKLDI 2204
Score = 90 (36.7 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
GG + +SC GDP P + WLL + + E+G L +K+ + L DA
Sbjct: 490 GGTIALSCPGKGDPSPHLEWLLADGSKVRAPY---VSEDGRILIDKNGKLELQMADSFDA 546
Query: 335 GEYTCYAEN 343
G Y C + N
Sbjct: 547 GLYHCISTN 555
Score = 88 (36.0 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 27/88 (30%), Positives = 40/88 (45%)
Query: 270 VIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
VI +AG V ++C V G+P P I W+L +G N L + S+ L+
Sbjct: 2321 VIAQAGKPVALNCSVDGNPPPEITWILPDGTQFAN------RPHNSPYLMAGNGSLILYK 2374
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDL 356
T +G+Y C A N G I L++
Sbjct: 2375 ATRNKSGKYRCAARNKVGYIEKLILLEI 2402
Score = 87 (35.7 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + ++C GDP+P I+W L + + D + S+ + +VT+ DA
Sbjct: 1930 GEKLLLNCSATGDPKPRIIWRLPSKAV----IDQWHRMGSRIHVYPNGSLVVGSVTEKDA 1985
Query: 335 GEYTCYAENIRGN 347
G+Y C A N G+
Sbjct: 1986 GDYLCVARNKMGD 1998
Score = 82 (33.9 bits), Expect = 8.5e-19, Sum P(3) = 8.5e-19
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 265 IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSI 324
+KE V G V + C V G P PT+ W+L Q + + + + ++
Sbjct: 1726 VKEITV--HFGSTVELKCRVEGMPRPTVSWILANQTVVSET----AKGSRKVWVTPDGTL 1779
Query: 325 TLFNVTDLDAGEYTCYAENIRGNAS 349
++N++ D G Y C A N G S
Sbjct: 1780 IIYNLSLYDRGFYKCVASNPSGQDS 1804
Score = 81 (33.6 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALF 318
P +T + MV +G +++ C G P+P + W G V+ D G +
Sbjct: 2406 PVILTYEPGMVKSVSGEPLSLHCVSDGIPKPNVKWTTPGGHVIDRPQVD------GKYIL 2459
Query: 319 EKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
++ ++ + T D G Y C A+N G A +S+
Sbjct: 2460 HENGTLVIKATTAHDQGNYICRAQNSVGQAVISVSV 2495
Score = 75 (31.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 252 VKAQEFACPPNVT--IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLL 309
V A PP + + +M +R G + + C G P+P + W L + +
Sbjct: 2493 VSVMVVAYPPRIINYLPRNM-LRRTGEAMQLHCVALGIPKPKVTWETPRHSLLSKA-TAR 2550
Query: 310 EEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ + L + ++ + N+ D+G Y C A+N+ G
Sbjct: 2551 KPHRSEMLHPQG-TLVIQNLQTSDSGVYKCRAQNLLG 2586
Score = 75 (31.5 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 25/128 (19%), Positives = 51/128 (39%)
Query: 252 VKAQEFACPPNVTI-KESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLE 310
VK Q PP + K ++ GG++ + C G P+P++ W+L + L+
Sbjct: 1807 VKIQVITAPPVIIEQKRQAIVGVLGGSLKLPCTAKGTPQPSVHWVL----YDGTELKPLQ 1862
Query: 311 EEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTL-SKTD 369
+ ++ + ++ G Y C A + G+ + L + E + + +
Sbjct: 1863 LTHSRFFLYPNGTLYIRSIAPSVRGTYECIATSSSGSERRVVILTVEEGETIPRIETASQ 1922
Query: 370 SWYMLVLG 377
W + LG
Sbjct: 1923 KWTEVNLG 1930
Score = 74 (31.1 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHN--SSFDLLEEEEGDALFEKSVSITLFNVTD 331
G + + C G P P + W L +G VL+N + D + LF ++ NV
Sbjct: 2027 GKDFQVDCKASGSPVPEVSWSLPDGTVLNNVAQADDSGYRTKRYTLFHNG-TLYFNNVGM 2085
Query: 332 LDAGEYTCYAENIRGNASGEISL 354
+ G+Y C A+N G ++ L
Sbjct: 2086 AEEGDYICSAQNTLGKDEMKVHL 2108
Score = 70 (29.7 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + + C G P+ +I W+L G N+ F + D + ++ + VT D
Sbjct: 588 GETLDLPCLSTGVPDASISWILPG----NTVFS---QPSRDRQILNNGTLRILQVTPKDQ 640
Query: 335 GEYTCYAENIRG 346
G Y C A N G
Sbjct: 641 GHYQCVAANPSG 652
Score = 61 (26.5 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 274 AGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
A +V + C GDP P I W L S ++ L ++SI ++ D
Sbjct: 1636 ANSDVFLPCEAVGDPLPIIHWTRVSSGLEISQGT--QKSRFHVLPNGTLSIQRVSIQD-- 1691
Query: 334 AGEYTCYAENIRGNASGEISLDL 356
G+Y C A N G +SL +
Sbjct: 1692 RGQYLCSAFNPLGVDHFHVSLSV 1714
Score = 46 (21.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 17/99 (17%), Positives = 42/99 (42%)
Query: 262 NVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDAL-FEK 320
N T+ ++ IR + C G P + W++ G + + + G +
Sbjct: 2217 NKTVIKATAIRHS--KKYFDCRADGIPSSQVTWIMPGNIFLPAPYF------GSRVTVHP 2268
Query: 321 SVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEI 359
+ ++ + N+ D+ ++TC + G + + L++ E+
Sbjct: 2269 NGTLEMRNIRLSDSADFTCVVRSEGGESVLVVQLEVLEM 2307
Score = 42 (19.8 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 502 VSVSQEPPGSDPPKYP-DLIDMP 523
V V+Q P G D Y D++ P
Sbjct: 2186 VCVAQNPSGDDTKTYKLDIVSKP 2208
>MGI|MGI:1923481 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=ISA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005021 "vascular endothelial growth factor-activated receptor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0042246 "tissue regeneration"
evidence=ISO] [GO:0048010 "vascular endothelial growth factor
receptor signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR009134 PRINTS:PR01832
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1923481 GO:GO:0005524
GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 MEROPS:I43.001 GO:GO:0048010 GO:GO:0005021
GO:GO:0038084 GeneTree:ENSGT00700000104014 CTD:285313
eggNOG:NOG239806 HOVERGEN:HBG107995 OMA:PYVSEDG OrthoDB:EOG45MN4F
EMBL:AC122038 EMBL:AK143421 EMBL:AC135238 EMBL:AK132367
EMBL:AK081990 IPI:IPI00405810 RefSeq:NP_001156356.1
UniGene:Mm.228086 UniGene:Mm.444186 HSSP:P07359
ProteinModelPortal:Q3V1M1 SMR:Q3V1M1 PhosphoSite:Q3V1M1
PRIDE:Q3V1M1 Ensembl:ENSMUST00000039419 GeneID:242050
KEGG:mmu:242050 UCSC:uc008piu.2 InParanoid:Q3V1M1 NextBio:385215
Bgee:Q3V1M1 CleanEx:MM_IGSF10 Genevestigator:Q3V1M1 Uniprot:Q3V1M1
Length = 2594
Score = 239 (89.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 65/223 (29%), Positives = 106/223 (47%)
Query: 12 CLGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLT 71
CL T P CP C C C T++P + ++++ ++L N ++ LT
Sbjct: 19 CLVVT--PGSRVCPRRCAC---YVPTEVHCTFRYLTSIPDGIPANVERVNLGYNSLTRLT 73
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F GL L+ + L ++GI V TF L L + +S N++ + +DT G L
Sbjct: 74 ENDFS--GLSRLELLMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIEKDTLYGLRSL 131
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALES--------LN 183
L+L+ N I + F L L+ + L+ ++ +H D + L+ L+ L
Sbjct: 132 TRLHLDHNNIEFINPEAFYGLTLLRLVHLEGNRLTKLHPDTFVSLSYLQIFKTSFIKYLY 191
Query: 184 LNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
L+ N L L + + PNL++L L GNPW CDCHL+ W+
Sbjct: 192 LSDNFLTSLPKEMVSSMPNLESLYLHGNPWTCDCHLKWLSEWM 234
Score = 107 (42.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 273 EAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL 332
+AG + C V G+P+P + WLL + + S D +F + ++++ V L
Sbjct: 2125 KAGDTAVLDCEVTGEPKPNVFWLLPSNNVISFSNDRF-------IFHANGTLSINKVKPL 2177
Query: 333 DAGEYTCYAENIRGNASGEISLDL 356
D+G+Y C A+N G+ + LD+
Sbjct: 2178 DSGKYVCVAQNPSGDDTKTYKLDI 2201
Score = 96 (38.9 bits), Expect = 6.8e-20, Sum P(3) = 6.8e-20
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 252 VKAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEE 311
V+ QE P T + G + ++C GDP+PTI+W L +V+ D
Sbjct: 1905 VEEQE-TVPRIETASQKWTEVNLGEKLLLNCSATGDPKPTIIWKLPSKVV----IDQWHR 1959
Query: 312 EEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
+ S+ + +VT+ D G+Y C A N G+
Sbjct: 1960 MGSRIHVYPNGSLVIGSVTEKDGGDYLCVARNKMGD 1995
Score = 90 (36.7 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 270 VIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
V+ + G V M+C V G+P P I+W+L +G N + L + S+ ++
Sbjct: 2318 VVAQVGKPVAMNCSVDGNPTPEIIWILPDGTQFANGP------QNSPYLMASNGSLIVYK 2371
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDL 356
T +G+Y C A N G I L++
Sbjct: 2372 ATRNKSGKYRCTARNKVGYIEKLILLEI 2399
Score = 86 (35.3 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 265 IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSI 324
+KE + +G V + C V G P PTI W+L Q + + + E ++
Sbjct: 1723 VKE--ITAHSGSTVKLKCRVEGMPRPTISWILANQTVVSET----PEGSRKVWVTPDGTL 1776
Query: 325 TLFNVTDLDAGEYTCYAENIRGNAS 349
+ N++ D G Y C A N G S
Sbjct: 1777 IIHNLSLYDRGFYKCVANNPSGQDS 1801
Score = 85 (35.0 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 258 ACPPNVT--IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGD 315
A PP + + SM +R G + + C G P+P I W G L +++ +
Sbjct: 2496 AYPPRIINYLPRSM-LRRTGEAMQLHCVALGVPKPQITWETPGYSLLSTATE--RRPHRS 2552
Query: 316 ALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ ++ + N+ D+G Y C A+N+ G
Sbjct: 2553 EMLPLQGTLVIQNLRASDSGVYKCRAQNVLG 2583
Score = 82 (33.9 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 256 EFACPPNVTIKESMVIREAGG-NVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEG 314
E P + E +I+ AGG ++++ C G P+P + W G ++ + + G
Sbjct: 2398 EIGQKPVILTYEPGMIKSAGGESLSLHCVSDGIPKPNVKWTTPGGLVIDRP-----QVGG 2452
Query: 315 DALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
+ ++ ++ + T D G Y C A+N G A
Sbjct: 2453 KYILHENGTLVIKETTAHDRGNYICKAQNSVGQA 2486
Score = 82 (33.9 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 262 NVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKS 321
N ++ ++++ GG + + C GDP P + W+L + + E+G L +K
Sbjct: 480 NTRLEHTVLV---GGTIALDCPGKGDPSPHLEWVLADGSKVRAPY---VSEDGRILIDKK 533
Query: 322 VSITLFNVTDLDAGEYTCYAEN 343
+ L DAG Y C + N
Sbjct: 534 GKLELQMADTFDAGLYHCISTN 555
Score = 74 (31.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 25/128 (19%), Positives = 50/128 (39%)
Query: 252 VKAQEFACPPNVTI-KESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLE 310
VK Q PP + K ++ G ++ + C G P+P++ W+L + L+
Sbjct: 1804 VKIQVITAPPVIIEQKRQAIVGVLGESLKLPCTAKGTPQPSVHWVL----YDGTELKPLQ 1859
Query: 311 EEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTL-SKTD 369
+ ++ + N+ G Y C A + G+ + L + E + + +
Sbjct: 1860 LTHSRFFLYPNGTLYIRNIVSSVRGTYECIATSSSGSERRVVILRVEEQETVPRIETASQ 1919
Query: 370 SWYMLVLG 377
W + LG
Sbjct: 1920 KWTEVNLG 1927
Score = 68 (29.0 bits), Expect = 5.0e-17, Sum P(3) = 5.0e-17
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 277 NVTMSCYVYGDPEPTILW--LLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
+V + C GDP+PTI W + +G+ + +++ L ++SI ++ D
Sbjct: 1636 DVLLPCEAVGDPKPTIHWTRVSSGREISRG----IQKTRFHVLPNGTLSIQRVSIQD--R 1689
Query: 335 GEYTCYAENIRG 346
G+Y C A N G
Sbjct: 1690 GQYLCAASNPLG 1701
Score = 67 (28.6 bits), Expect = 6.4e-17, Sum P(3) = 6.4e-17
Identities = 22/84 (26%), Positives = 36/84 (42%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHN--SSFDLLEEEEGDALFEKSVSITLFNVTD 331
G + + C G P P + W L +G V++N + D + LF FN
Sbjct: 2024 GKDFQVDCKASGSPVPEVSWSLPDGTVVNNVAQADDSGYRTKRYTLFHNGT--LYFNKVG 2081
Query: 332 L-DAGEYTCYAENIRGNASGEISL 354
+ + G+Y C A+N G ++ L
Sbjct: 2082 MAEEGDYICSAQNTLGKDEMKVHL 2105
Score = 61 (26.5 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + + C G P+ +I W+L V SS D+ G ++ + T D
Sbjct: 588 GEILDLPCLSTGIPDASISWILPRNTVFSQSSRDMQILNNG--------TLRILQATPKD 639
Query: 334 AGEYTCYAENIRGN--ASGEISLDL 356
G Y C A N G +S ++S+ +
Sbjct: 640 QGHYRCVAANPSGADFSSFQVSVQM 664
Score = 53 (23.7 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 17/98 (17%), Positives = 43/98 (43%)
Query: 262 NVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKS 321
N T+ ++ I+ + + + C G P P I W++ + + + G ++
Sbjct: 2214 NKTVIKATAIQHSKKH--LDCRADGVPPPQITWIMPDNIFLTAPY-----YGGRITVHQN 2266
Query: 322 VSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEI 359
++ + N+ D+ ++TC + G + + L + E+
Sbjct: 2267 GTLEIRNIRLSDSADFTCVVRSEGGESVLVVQLKVLEM 2304
Score = 42 (19.8 bits), Expect = 6.8e-20, Sum P(3) = 6.8e-20
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 502 VSVSQEPPGSDPPKYP-DLIDMP 523
V V+Q P G D Y D++ P
Sbjct: 2183 VCVAQNPSGDDTKTYKLDIVSRP 2205
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 278 (102.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 92/342 (26%), Positives = 157/342 (45%)
Query: 42 KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
K +F + S +D L L+ N IS++T AF L NL+ ++L ++ + ++ D F
Sbjct: 67 KRKDFANMTSLVD-----LTLSRNTISFITPHAFAD--LRNLRALHLNSNRLTKITNDMF 119
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L+ L + L++NQ+ + F L+ L L+ N + + K+ L T+ L
Sbjct: 120 SGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLD 179
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-----------TPNLKTLSLDG 210
H I ++ K HL + L++ N+L+ L F +P+ LS G
Sbjct: 180 HNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGG 239
Query: 211 NPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
NP C+C L WL + +C P +L +++ + +EF C P + + +
Sbjct: 240 NPLHCNCELL----WLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHE 295
Query: 271 IREAGGN-VTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+R G T+ C GDPEP I W+ G+++ N++ L+ + G + IT
Sbjct: 296 MRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDN-GTL----DILIT--- 347
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTDS 370
T D G +TC A N G A+ ++DL I L L+ T++
Sbjct: 348 -TVKDTGAFTCIASNPAGEATQ--TMDLHIIKLPHLLNSTNN 386
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/188 (21%), Positives = 85/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P +D L L +N ++ + ++ F + + +L
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFAN--MTSL 77
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I + F L L + L+ N++ + D F G L L LN N +T
Sbjct: 78 VDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTL 137
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ + F + L+ ++L + + ++ DA+ + +L +L+L+ N + ++ + F +
Sbjct: 138 ISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKM 197
Query: 204 KTLSLDGN 211
L + N
Sbjct: 198 TRLDVTSN 205
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 280 (103.6 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 89/317 (28%), Positives = 151/317 (47%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L ++ N I ++ +A++ L + L + + + F L++L ++L DN+
Sbjct: 289 LQQLYVSQNAIERISPDAWEFCQ--RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNR 346
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + F L+ L L N I+ E + F L L + LQ QI S+ K A
Sbjct: 347 VTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAF 406
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL-Y 232
I L +LE L+LN N + + E+ F T +LK L L+ + CDCHL+ WL+ + +
Sbjct: 407 IGLESLEHLDLNNNAIMSIQENAFSQT-HLKELILNTSSLLCDCHLKWLLQWLVDNNFQH 465
Query: 233 SHPLSCTEPGMLQTKHWDDVKAQEFACP----PNVTIKESMVIREAGGNVTMSCYVYG-- 286
S +SC P L + +V ++F C P + +I G NVT++C
Sbjct: 466 SVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPETIIALRGMNVTLTCTAVSSS 525
Query: 287 DPEPTILWLLNGQVLHN---SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
D + +W + ++L++ +F ++ G+AL S+ + LFNV D G+Y C N
Sbjct: 526 DSPMSTVWRKDSEILYDVDTENFVRYWQQAGEALEYTSI-LHLFNVNFTDEGKYQCIVTN 584
Query: 344 IRG-NASGEISLDLPEI 359
G N S + L + E+
Sbjct: 585 HFGSNYSQKAKLTVNEM 601
Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/177 (26%), Positives = 88/177 (49%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L+L N+I + F+ GL +L+ + ++ +GI ++ F L + E++L N
Sbjct: 217 LQFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNN 274
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ +++ G L+ LY++ N I + + L ++L + Q+ + + A + L
Sbjct: 275 LTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGL 334
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP--WCCDCHLRSFRNWLLKSKL 231
+ LE LNL NR+ H+++ VF NL+TL L N W + +F +KL
Sbjct: 335 SLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKL 391
Score = 149 (57.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
L S + V+ LN N++S + + FK L +LQ + LK + I+ V TF+ L L + +
Sbjct: 190 LSSSLLVVKLNRNRMSMIPPKIFK---LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKM 246
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
N I+ L F G + ++ L L N +T + G L L+ + + I + DA
Sbjct: 247 QRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDA 306
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+L+ N+L L ES F L+ L+L N
Sbjct: 307 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 345
Score = 115 (45.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLS 113
S++Q LDL NN+IS+ ++A ++ GL +L ++ L+ + I+ + + F L L +DL+
Sbjct: 359 SNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLN 418
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLN 137
+N I + ++ F LK L LN
Sbjct: 419 NNAIMSIQENAF-SQTHLKELILN 441
Score = 113 (44.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDA-NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP C C+ L S A ++ AL L D +LD ++N++S S+
Sbjct: 43 CPAPCSCRIPLLDCSRRKLPAPSWRALSGLLPPDTAILDFSHNRLSNWNI----SLESQT 98
Query: 83 LQRIYLKNSGIREV--HRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
LQ + + + + E+ + +T+L L N I ++ L+ L L+ N
Sbjct: 99 LQEVKMNYNELTEIPYFGEPTSNITLL---SLVHNIIPEINAQALQFYPALESLDLSSNI 155
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA-LESLNLNGNRLKHLSESVFFP 199
I+E++ FP++ LK + L + +I ++ +L++ L + LN NR+ + +F
Sbjct: 156 ISEIKTSSFPRMQ-LKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIF-K 213
Query: 200 TPNLKTLSLDGN 211
P+L+ L L N
Sbjct: 214 LPHLQFLELKRN 225
Score = 112 (44.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 44/162 (27%), Positives = 79/162 (48%)
Query: 52 TLDSD-IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEV 110
+L+S +Q + +N N+ LT+ + N+ + L ++ I E++ ++ L +
Sbjct: 93 SLESQTLQEVKMNYNE---LTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALESL 149
Query: 111 DLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY-LKTIELQHCQIHSVH 169
DLS N I+ + +F +LK L L+ N IT L AG F L L ++L ++ S+
Sbjct: 150 DLSSNIISEIKTSSF-PRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRM-SMI 207
Query: 170 KDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L L+ L L NR+K + F +L++L + N
Sbjct: 208 PPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRN 249
Score = 85 (35.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 27/90 (30%), Positives = 36/90 (40%)
Query: 269 MVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+ IR G + C G P P I W +G + F E + E V + N
Sbjct: 611 LTIR-TGAMARLECAAEGHPAPQISWQKDG----GTDFPAARERRMHVMPEDDVFF-IAN 664
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPE 358
V D G Y+C A+N G S SL + E
Sbjct: 665 VKIEDMGIYSCMAQNTAGGLSANASLTVLE 694
Score = 64 (27.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 265 IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSI 324
+++ V R G + C G P P + W + L L+ E A + + I
Sbjct: 702 LEDKTVTR--GETAVLQCIAGGSPAPRLNWTKDDGPL------LVTERHFFAAANQLLII 753
Query: 325 TLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
+ D AG+YTC N G G I L++
Sbjct: 754 VDAGLED--AGKYTCIMSNTLGTERGHIYLNV 783
>FB|FBgn0011828 [details] [associations]
symbol:Pxn "Peroxidasin" species:7227 "Drosophila
melanogaster" [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0004601
"peroxidase activity" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS00436
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
SMART:SM00214 EMBL:AE014296 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0005578 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0006909 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Gene3D:1.10.640.10 HSSP:P05164 GeneTree:ENSGT00550000074325
CTD:5829 ChiTaRS:PXN EMBL:U11052 EMBL:AY051536 EMBL:AY052120
RefSeq:NP_523891.2 RefSeq:NP_728759.1 RefSeq:NP_995975.1
RefSeq:NP_995976.1 RefSeq:NP_995977.1 UniGene:Dm.8030
ProteinModelPortal:Q9VZZ4 SMR:Q9VZZ4 IntAct:Q9VZZ4
MINT:MINT-1680107 STRING:Q9VZZ4 PeroxiBase:3369 PeroxiBase:3370
PaxDb:Q9VZZ4 PRIDE:Q9VZZ4 EnsemblMetazoa:FBtr0072951
EnsemblMetazoa:FBtr0072952 EnsemblMetazoa:FBtr0072953
EnsemblMetazoa:FBtr0072954 GeneID:38326 KEGG:dme:Dmel_CG12002
FlyBase:FBgn0011828 InParanoid:Q9VZZ4 OMA:GGRYECQ OrthoDB:EOG4JWSV8
PhylomeDB:Q9VZZ4 GenomeRNAi:38326 NextBio:808033 Bgee:Q9VZZ4
Uniprot:Q9VZZ4
Length = 1527
Score = 282 (104.3 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 84/267 (31%), Positives = 125/267 (46%)
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L+ + I E+ + F L L + L+DN++A+L G L+ +YLN N ++
Sbjct: 55 QTLDLRFNHIEELPANAFSGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSR 114
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L A F ++P L+ I L++ I + +L L L + N+L L F NL
Sbjct: 115 LPATIFQRMPRLEAIFLENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNL 174
Query: 204 KTLSLDGNPWCCDCHLRS-FRNWLL--KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
K L LDGN C+C + S +R W L + +L S L+C P MLQ + + + F C
Sbjct: 175 KRLRLDGNAIDCNCGVYSLWRRWHLDVQRQLVSISLTCAAPQMLQNQGFSSLGEHHFKCA 234
Query: 261 -PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P + AG V +SC V G P P I W+ HN+ +L EE+ A
Sbjct: 235 KPQFLVAPQDAQVAAGEQVELSCEVTGLPRPQITWM------HNTQ-ELGLEEQAQAEIL 287
Query: 320 KSVSITLFNVTDLDAGEYTCYAENIRG 346
S S+ + + D G Y C A N G
Sbjct: 288 PSGSLLIRSADTSDMGIYQCIARNEMG 314
Score = 172 (65.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C +++ C A +A+P L D Q LDL N I L AF GL L
Sbjct: 26 CPAGCTCL----ERTVRCIRAKLSAVPK-LPQDTQTLDLRFNHIEELPANAFS--GLAQL 78
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
++L ++ + + LT L V L++N+++ L F RL+ ++L N I +
Sbjct: 79 TTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPRLEAIFLENNDIWQ 138
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
L AG F LP L + + + ++ + D L L+ L L+GN +
Sbjct: 139 LPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAI 184
Score = 117 (46.2 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 260 PPNVTIK--ESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDAL 317
PP+ T + + +V G+V + C G P+P I W +NG+ L S+ L + G
Sbjct: 364 PPHFTHQPHDQIVALHGSGHVLLDCAASGWPQPDIQWFVNGRQLLQSTPSLQLQANG--- 420
Query: 318 FEKSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISL-DLPEINLATTLSKT 368
S+ L L AG Y C A N G+ A+ I L +LPEI L S+T
Sbjct: 421 -----SLILLQPNQLSAGTYRCEARNSLGSVQATARIELKELPEI-LTAPQSQT 468
Score = 89 (36.4 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 29/95 (30%), Positives = 41/95 (43%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P +T +S I+ G + C G+P PTI W LNG L ++ DL E E
Sbjct: 458 PEILTAPQSQTIK-LGKAFVLECDADGNPLPTIDWQLNGVPLPGNTPDLQLENE------ 510
Query: 320 KSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
+ + + AG Y C A N G S E ++
Sbjct: 511 -NTELVVGAARQEHAGVYRCTAHNENGETSVEATI 544
Score = 82 (33.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 252 VKAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEP--TILWLLNGQVLHNSSFDLL 309
+K + PP + I+ S ++ G + + C PE I W +G+++ + + L
Sbjct: 544 IKVERSQSPPQLAIEPSNLVAITGTTIELPCQA-DQPEDGLQISWRHDGRLI-DPNVQLA 601
Query: 310 EEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
E+ + + S+ + NVT D G Y C +N G AS
Sbjct: 602 EKYQ----ISGAGSLFVKNVTIPDGGRYECQLKNQFGRAS 637
Score = 40 (19.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 279 TMSCYVYGD 287
TMSC+V GD
Sbjct: 1002 TMSCFVSGD 1010
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 276 (102.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 91/341 (26%), Positives = 155/341 (45%)
Query: 42 KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
K +F + S +D L L+ N IS++T AF L NL+ ++L ++ + ++ D F
Sbjct: 67 KRKDFANMTSLVD-----LTLSRNTISFITPHAFAD--LRNLRALHLNSNRLTKITNDMF 119
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L+ L + L++NQ+ + F L+ L L+ N + + K+ L T+ L
Sbjct: 120 SGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLD 179
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-----------TPNLKTLSLDG 210
H I ++ K HL + L++ N+L+ L F +P+ LS G
Sbjct: 180 HNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGG 239
Query: 211 NPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
NP C+C L WL + +C P +L +++ + +EF C P + + +
Sbjct: 240 NPLHCNCELL----WLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHE 295
Query: 271 IREAGGN-VTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+R G T+ C GDPEP I W+ G+++ N++ L+ + G + IT
Sbjct: 296 MRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDN-GTL----DILIT--- 347
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTD 369
T D G +TC A N G A+ + L + I L L+ T+
Sbjct: 348 -TVKDTGAFTCIASNPAGEATQTVDLHI--IKLPHLLNSTN 385
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/188 (21%), Positives = 85/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P +D L L +N ++ + ++ F + + +L
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFAN--MTSL 77
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I + F L L + L+ N++ + D F G L L LN N +T
Sbjct: 78 VDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTL 137
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ + F + L+ ++L + + ++ DA+ + +L +L+L+ N + ++ + F +
Sbjct: 138 ISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKM 197
Query: 204 KTLSLDGN 211
L + N
Sbjct: 198 TRLDVTSN 205
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 274 (101.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 93/341 (27%), Positives = 157/341 (46%)
Query: 42 KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
K +F + S +D L L+ N IS++T AF L NL+ ++L ++ + ++ D F
Sbjct: 67 KRKDFANMTSLVD-----LTLSRNTISFITPHAFAD--LRNLRALHLNSNRLTKITNDMF 119
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L+ L + L++NQ+ + F L+ L L+ N + + K+ L T+ L
Sbjct: 120 SGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLD 179
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-----------TPNLKTLSLDG 210
H I ++ K HL + L++ N+L+ L F +P+ LS G
Sbjct: 180 HNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGG 239
Query: 211 NPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
NP C+C L WL + +C P +L +++ + +EF C P + + +
Sbjct: 240 NPLHCNCELL----WLRRLSREDDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHTHE 295
Query: 271 IREAGGN-VTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+R G T+ C GDPEP I W+ G+++ N++ L+ + G + IT
Sbjct: 296 MRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDN-GTL----DILIT--- 347
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTD 369
T D G +TC A N G A+ +I +DL I L L+ T+
Sbjct: 348 -TVKDTGAFTCIASNPAGEAT-QI-VDLHIIKLPHLLNSTN 385
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/188 (21%), Positives = 85/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P +D L L +N ++ + ++ F + + +L
Sbjct: 20 CPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFAN--MTSL 77
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I + F L L + L+ N++ + D F G L L LN N +T
Sbjct: 78 VDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTL 137
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ + F + L+ ++L + + ++ DA+ + +L +L+L+ N + ++ + F +
Sbjct: 138 ISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKM 197
Query: 204 KTLSLDGN 211
L + N
Sbjct: 198 TRLDVTSN 205
>ZFIN|ZDB-GENE-050522-160 [details] [associations]
symbol:lrit2 "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 2" species:7955
"Danio rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-050522-160 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:P07359 EMBL:BC095086 IPI:IPI00493555 RefSeq:NP_001018372.2
UniGene:Dr.82810 ProteinModelPortal:Q504C1 GeneID:553557
KEGG:dre:553557 CTD:340745 HOGENOM:HOG000082676 HOVERGEN:HBG060406
InParanoid:Q504C1 OrthoDB:EOG4X97H6 NextBio:20880298 Uniprot:Q504C1
Length = 561
Score = 269 (99.8 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 91/344 (26%), Positives = 152/344 (44%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
++C C C +S C + T +P L D+ + + +++S L + F + L
Sbjct: 21 SECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIRIEKSQLSELPEAVFSHVKAL 80
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+ ++L + I ++ + + L L E+ L N++ + F LK+L L N I
Sbjct: 81 --KHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVPWTAFEETPNLKILDLKHNRI 138
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
L LP L ++L Q+ + KD ++ S N KH E P+
Sbjct: 139 DALPEHALKFLPGLTYLDLSSNQLSVISKDVFLNWPLYHSEN------KH--EK---PSA 187
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSK-----LYSHPLSCTEPGMLQTKHWDDVKAQE 256
+ L+L NPW CDC L F ++ KS L + L+C+ P + + + +V +
Sbjct: 188 SNVVLALHDNPWLCDCRLGGFIEFI-KSLTPPFILMNSYLTCSSPELKAGRFFHEVDLKT 246
Query: 257 FACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDA 316
P V+ + GGNVT++C PE I W+ ++L D+L + D
Sbjct: 247 -CVKPVVSAPVITITAPLGGNVTLTCSASARPEAVIRWIYALKMLRGFR-DILSHVDEDT 304
Query: 317 LFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDL--PE 358
+ + V +L + D G YTC A N GN+S IS+D+ PE
Sbjct: 305 ISSQLVIPSLHSA---DRGLYTCIANNFLGNSSVIISVDVKSPE 345
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 273 (101.2 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 88/317 (27%), Positives = 151/317 (47%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L ++ N I ++ +A++ L + L + + + F L++L ++L DN+
Sbjct: 288 LQQLYMSQNAIEKISPDAWEFCQ--RLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNR 345
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + F L+ L L N I+ E + F L L + LQ +I SV + A
Sbjct: 346 VTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAF 405
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLY- 232
I L +LE L+LN N + + E+ F T +LK L L+ + CDCHL+ WL+ + +
Sbjct: 406 IGLESLEYLDLNNNAIMSIQENAFSQT-HLKGLVLNTSSLLCDCHLKWLLQWLVDNNFHH 464
Query: 233 SHPLSCTEPGMLQTKHWDDVKAQEFACP----PNVTIKESMVIREAGGNVTMSCYVYG-- 286
S +SC P L + +V ++F C P + I G NVT++C
Sbjct: 465 SVNVSCAHPEWLAGQSILNVDLKDFVCDDFLKPQIRTHPESTIALRGVNVTLTCTAVSSS 524
Query: 287 DPEPTILWLLNGQVLHN---SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
D + +W + ++L++ +F +++G+AL SV + LF+V D G+Y C N
Sbjct: 525 DSPMSTIWRKDSEILYDVDIENFVRYRQQDGEALEYTSV-LRLFSVNFTDEGKYQCIVTN 583
Query: 344 IRG-NASGEISLDLPEI 359
G N S + L + E+
Sbjct: 584 HFGSNYSQKAKLTVNEM 600
Score = 185 (70.2 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 48/160 (30%), Positives = 88/160 (55%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
++++ L+L +N ++ + K GL LQ++Y+ + I ++ D +++ L E+DLS
Sbjct: 262 NNMEELELEHNNLTGVNKGWL--YGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSY 319
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
NQ+ L + F+G L+ L L N +T + G F L L+T++L++ I +DA
Sbjct: 320 NQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASE 379
Query: 175 HLTALESLN---LNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L+SL L GNR+K +++ F +L+ L L+ N
Sbjct: 380 AFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNN 419
Score = 171 (65.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 48/175 (27%), Positives = 89/175 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L+L N+I + F+ GL +L+ + ++ +GI ++ F L + E++L N
Sbjct: 216 LQFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNN 273
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ +++ G L+ LY++ N I ++ + L ++L + Q+ + + A + L
Sbjct: 274 LTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGL 333
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP--WCCDCHLRSFRNWLLKS 229
+ LE LNL NR+ H+++ VF NL+TL L N W + +F LKS
Sbjct: 334 SLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSG--LKS 386
Score = 149 (57.5 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
L + V+ LN N+IS + + FK L +LQ + LK + I+ V TF+ L L + +
Sbjct: 189 LSDSLLVVKLNRNRISMIPPKVFK---LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKM 245
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
N I+ L F G + ++ L L N +T + G L L+ + + I + DA
Sbjct: 246 QRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDA 305
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+L+ N+L L ES F L+ L+L N
Sbjct: 306 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDN 344
Score = 133 (51.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 52/192 (27%), Positives = 92/192 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDA-NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP C C+ L S A ++ AL L SDI LDL++N++S ++
Sbjct: 42 CPAPCACRLPLLDCSRRKLPAPSWRALSGPLPSDISSLDLSHNRLSNWNN----TLESQT 97
Query: 83 LQRIYLKNSGIREV--HRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
LQ + + + + E+ + +T+L L N I ++ + F L+ L L+ N
Sbjct: 98 LQEVKMNYNELTEIPYFGEPTPNITLL---SLVHNLIPEINAEAFELYSALESLDLSSNI 154
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLT-ALESLNLNGNRLKHLSESVFFP 199
I+E++ FP++ LK + L + +I ++ +L+ +L + LN NR+ + VF
Sbjct: 155 ISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVF-K 212
Query: 200 TPNLKTLSLDGN 211
P+L+ L L N
Sbjct: 213 LPHLQFLELKRN 224
Score = 118 (46.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 46/163 (28%), Positives = 81/163 (49%)
Query: 51 STLDSD-IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
+TL+S +Q + +N N+ LT+ + N+ + L ++ I E++ + F+ + L
Sbjct: 91 NTLESQTLQEVKMNYNE---LTEIPYFGEPTPNITLLSLVHNLIPEINAEAFELYSALES 147
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLP-YLKTIELQHCQIHSV 168
+DLS N I+ + +F LK L L+ N I+ L AG F L L ++L +I S+
Sbjct: 148 LDLSSNIISEIKTSSF-PRMSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRI-SM 205
Query: 169 HKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L L+ L L NR+K + F +L++L + N
Sbjct: 206 IPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRN 248
Score = 90 (36.7 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 28/90 (31%), Positives = 37/90 (41%)
Query: 269 MVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+ IR G + C G P P I W +G + F E + E V + N
Sbjct: 610 LTIR-TGAMARLECAAEGHPTPQISWQKDG----GTDFPAARERRMHVMPEDDVFF-IAN 663
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPE 358
V D G Y+C A+NI G S SL + E
Sbjct: 664 VKIEDMGIYSCMAQNIAGGLSANASLTVLE 693
Score = 64 (27.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 265 IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSI 324
+++ V R G + C G P P + W + L L+ E A + + I
Sbjct: 701 LEDKTVTR--GETAVLQCIAGGSPAPRLNWTKDDGPL------LVTERHFFAAANQLLII 752
Query: 325 TLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
+ D AG+YTC N G G I L++
Sbjct: 753 VDAGLED--AGKYTCLMSNTLGTERGHIYLNV 782
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 268 (99.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 87/322 (27%), Positives = 144/322 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+++L +N N I + +A++ L+ + L + + + F L++L ++L DNQ
Sbjct: 247 LRILRVNQNNIGLIRADAWEFCH--RLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQ 304
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
I+ L + F ++ L + N I+ E G F L L ++ LQ+ +I ++ K A
Sbjct: 305 ISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAF 364
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLY- 232
L LE+L+L+ N + + F LKTL L+ + CDC L+ WL+ S+
Sbjct: 365 EGLMELENLDLSKNGIMSIHPDAFTHL-KLKTLDLNSSSLLCDCQLQWLGQWLINSRFQQ 423
Query: 233 SHPLSCTEPGMLQTKHWDDVKAQEFAC---P-PNVTIKESMVIREAGGNVTMSCYVYG-- 286
S C P L VK +EF C P P +T + G NVT++C +
Sbjct: 424 SCTAVCAHPASLAGSSVLAVKPEEFVCSDFPKPQITAHPKTAVALRGTNVTLNCSAFSSS 483
Query: 287 DPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
D + W +G+VL+ + + L ++ + L NV D G+Y C N G
Sbjct: 484 DSPMSTAWRKDGEVLYEAQVQNYARYQDQRLLYTTI-LHLLNVNFTDEGQYQCVLSNHFG 542
Query: 347 NASGEISLDLPEINLATTLSKT 368
S +L +N T KT
Sbjct: 543 --SNYSTLAKLTVNELPTFLKT 562
Score = 159 (61.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/157 (28%), Positives = 78/157 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S +QVL+L N+I + FK L L+ + ++ +GI ++ L + E++L
Sbjct: 173 SQLQVLELRRNRIRVVESLIFKE--LKALKSLKMQRNGITKLMDGALFGLENMEELELEY 230
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N + L++ G L++L +N N I +RA + L+ ++L + +
Sbjct: 231 NNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFA 290
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L+SLNL N++ HL E VF N++TL + N
Sbjct: 291 GLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNN 327
Score = 155 (59.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 50/187 (26%), Positives = 91/187 (48%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ L+L N ++ L K + +L + R+ N G+ + D +++ L E+DLS N
Sbjct: 222 NMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGL--IRADAWEFCHRLEELDLSFN 279
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL-- 173
++ L F G L+ L L N I+ L G F L ++T+++++ +I +D +
Sbjct: 280 HLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGM 339
Query: 174 -IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKS-KL 231
+ L L SL L N+++ +++ F L+ L L N H +F + LK+ L
Sbjct: 340 FVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDLSKNG-IMSIHPDAFTHLKLKTLDL 398
Query: 232 YSHPLSC 238
S L C
Sbjct: 399 NSSSLLC 405
Score = 148 (57.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 48/157 (30%), Positives = 72/157 (45%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S + VL +N N++S L + F L LQ + L+ + IR V FK L L + +
Sbjct: 150 SSLLVLKINQNRLSLLPDKVFT---LSQLQVLELRRNRIRVVESLIFKELKALKSLKMQR 206
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N I L G + ++ L L N +TEL G L L+ + + I + DA
Sbjct: 207 NGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWE 266
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
LE L+L+ N L L + VF L++L+L N
Sbjct: 267 FCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDN 303
Score = 137 (53.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 50/189 (26%), Positives = 82/189 (43%)
Query: 24 CPDTCRCKWTLGKKSAL-CKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP C C G L C TA + + +N N+ LT F N
Sbjct: 24 CPSPCSCSGGPGAAQLLDCNRKRLTAAALEAPAWVTHASINQNE---LTAVPFLGDASSN 80
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ + L ++ I EV + + L +DLS N I+ L +F +LK L L+ N I+
Sbjct: 81 ITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPM-QLKYLNLSKNKIS 139
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L G F + L +++ ++ S+ D + L+ L+ L L NR++ + +F
Sbjct: 140 SLEPGCFGNISSLLVLKINQNRL-SLLPDKVFTLSQLQVLELRRNRIRVVESLIFKELKA 198
Query: 203 LKTLSLDGN 211
LK+L + N
Sbjct: 199 LKSLKMQRN 207
Score = 116 (45.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKS--IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
++++ LD+ NN+IS L E F +GL L + L+N+ IR + + F+ L L +DL
Sbjct: 317 ANVRTLDIRNNEIS-LAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDL 375
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
S N I +H D F + +LK L LN + +
Sbjct: 376 SKNGIMSIHPDAFT-HLKLKTLDLNSSSL 403
Score = 75 (31.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 265 IKESMVIREAGGNVT-MSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVS 323
+K M + G V + C G P P I W +G + +F E + + +
Sbjct: 560 LKTPMDLTIRTGTVARLECAAEGHPTPQIAWQKDGGI----NFPAARERRMHVMPDDD-T 614
Query: 324 ITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPE 358
+ NV D G Y+C A+N G+ S +L + E
Sbjct: 615 FFIANVKAEDMGVYSCTAKNEAGSLSANATLTVLE 649
Score = 72 (30.4 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 26/100 (26%), Positives = 38/100 (38%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + C G P P + W + L +L E A + + I + DA
Sbjct: 665 GETAVLQCIARGSPAPRLNWTKDDAPL------VLTERHFFAAANQLLIIV--DAGPADA 716
Query: 335 GEYTCYAENIRGNASGEISLDL-PEINL--ATTLSKTDSW 371
G+YTC N G G I L + P N +++ D W
Sbjct: 717 GKYTCIMSNTLGTERGHIYLSVSPSANCDPGSSVYGHDGW 756
>UNIPROTKB|F1PKU2 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EFRYNDL
EMBL:AAEX03015771 EMBL:AAEX03015772 EMBL:AAEX03015773
Ensembl:ENSCAFT00000010829 Uniprot:F1PKU2
Length = 1429
Score = 266 (98.7 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 79/263 (30%), Positives = 119/263 (45%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ FK L L + L++NQI + ++ F G + L LYL N I L
Sbjct: 18 LRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQ 77
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + + QI + + L LE L L+ N+L + F +LK L
Sbjct: 78 TFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLR 137
Query: 208 LDGNPWCCDCHLR---SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP-PNV 263
LD N CDC L ++ +C P LQ + + +EF C P +
Sbjct: 138 LDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRI 197
Query: 264 TIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVS 323
T + V +G V +C G+P+P I+W+ N N S DL E++ LF+ +
Sbjct: 198 TYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHN-----NHSLDL-EDDHRLNLFDDG-T 250
Query: 324 ITLFNVTDLDAGEYTCYAENIRG 346
+ + N + D GEY C A N G
Sbjct: 251 LMIRNTRESDQGEYQCMARNSAG 273
Score = 150 (57.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 38/104 (36%), Positives = 61/104 (58%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+ L LNNN+I +++ AF+ GL NL +YL + IR + + TFK L L ++ + NQ
Sbjct: 37 LNTLLLNNNQIRQISRNAFE--GLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQ 94
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
I L +TF +L+ L+L+ N ++++ AG F L LK + L
Sbjct: 95 IEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRL 138
Score = 147 (56.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 61 DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWL 120
DL N+I + + AFK + LN + L N+ IR++ R+ F+ L L+ + L N+I L
Sbjct: 17 DLRFNRIREIPESAFKKLKTLNT--LLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRAL 74
Query: 121 HQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALE 180
+ TF G L+ LY++ N I L+ F L L+ + L + ++ + + HL +L+
Sbjct: 75 DKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLK 134
Query: 181 SLNLNGNRL 189
L L+ N L
Sbjct: 135 RLRLDSNAL 143
Score = 97 (39.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 273 EAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALFEKSVSITLFNVTD 331
E G N+ +SC+ G+P+P I W G Q+ + F + G+ + +T+++
Sbjct: 484 EVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHV----SGEGM------LTIYDAGQ 533
Query: 332 LDAGEYTCYAENIRG 346
D G Y C A+N G
Sbjct: 534 ADQGRYECVAQNSFG 548
Score = 88 (36.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
V DL N+I + + F L L LN N I ++ F L L + L +I +
Sbjct: 14 VHRDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRA 73
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ K L +LE L ++ N+++ L F L+ L L N
Sbjct: 74 LDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNN 117
Score = 81 (33.6 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + T+ C G P P + W NG+ L +G S + L NVT D
Sbjct: 305 GTSTTLECMATGHPHPRVTWTRGNGEAL-----------DGSRHLATSGGLYLKNVTLQD 353
Query: 334 AGEYTCYAENIRGN--ASGEISLDLP 357
G++ C+A N +G A+ I + P
Sbjct: 354 HGQFICHANNNQGTVQATANIIVQAP 379
Score = 68 (29.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/115 (26%), Positives = 48/115 (41%)
Query: 260 PPNVTI--KESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDAL 317
PP T+ K+ +V+ E V C G+P P I W G L +EG
Sbjct: 379 PPQFTVIPKDQVVLEEH--TVEFLCEAEGNPPPIIAWTKAGGKL---------PQEGLHT 427
Query: 318 FEKSVSITLFNVTDLDAGEYTCYAENIRG--NASGEISLDLPEINLATTLSKTDS 370
S ++ + V D G+Y C A + G AS ++++ + + T L + S
Sbjct: 428 VLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTS 482
Score = 44 (20.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTP--NLKTLSLDGNPWCCDC-HLRSFR-NWLLKS 229
+ +T + L +G+R + + VF P L+ SL G C + +++ + + +K+
Sbjct: 1184 LFVTQFQRLR-DGDRFWYENPGVFTPAQLTQLRQASL-GRVLCDNGDNIQQVQADVFVKA 1241
Query: 230 KLYSHPLSCTEPGMLQTKHWDD 251
K LSC E + + W D
Sbjct: 1242 KYPQDYLSCDEIPQVDLRMWQD 1263
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 266 (98.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 79/273 (28%), Positives = 127/273 (46%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ F+ L L + L++NQI + F + LK LYL N I +
Sbjct: 66 LRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQ 125
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L QI ++ ++ HL LE L L+ NR+ HL F ++K L
Sbjct: 126 AFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLR 185
Query: 208 LDGNPWCCDCHLRSFRNWLLKSKLYSH----PLSCTEPGMLQTKHWDDVKAQEFACP-PN 262
LD N CDC + + LLK+ S +C P +Q + + +E C P
Sbjct: 186 LDSNALHCDCEILWLAD-LLKTYAQSGNAQAAATCEYPRRIQGRSVATITPEELNCERPR 244
Query: 263 VTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV 322
+T + +G V +C G+P+P I+WL N N+ + + + L + ++
Sbjct: 245 ITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRN-----NNELSMKTDSRLNLLDDGTL 299
Query: 323 SITLFNVTDLDAGEYTCYAENIRGNA-SGEISL 354
I N + D G Y C A+N+ G A + E++L
Sbjct: 300 MIQ--NTQEADEGVYQCMAKNVAGEAKTQEVTL 330
Score = 156 (60.0 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 53/199 (26%), Positives = 86/199 (43%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
+ S CP C C T + C A+P+ +LDL N+I +
Sbjct: 22 MAVVASKQGAGCPSRCLCFRT----TVRCMHLLLEAVPAVAPQT-SILDLRFNRIREIQP 76
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
AF+ + LN + L N+ I+++ F+ L L + L N+I + + F G L+
Sbjct: 77 GAFRRLRSLNT--LLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLE 134
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
LYL+ N I L F LP L+ + L + +I + L +++ L L+ N L H
Sbjct: 135 QLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSNAL-HC 193
Query: 193 SESVFFPTPNLKTLSLDGN 211
+ + LKT + GN
Sbjct: 194 DCEILWLADLLKTYAQSGN 212
Score = 116 (45.9 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALF 318
P +I M + E G NV + C G+PEP I W +G QV + F + EG F
Sbjct: 522 PVFASIPSDMTV-EVGTNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHI--SPEG---F 575
Query: 319 EKSVSITLFNVTDLDAGEYTCYAENIRGNASGE--ISLDLPEIN 360
+T+ +V DAG Y C A N G AS +S+++P+++
Sbjct: 576 -----LTINDVGTADAGRYECVARNTIGYASVSMVLSVNVPDVS 614
Score = 78 (32.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 31/102 (30%), Positives = 40/102 (39%)
Query: 250 DDVKAQEF----ACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSS 305
D + A F A P +S V+ E G V C G P+P I W G L S
Sbjct: 416 DSIHATAFIIVQALPQFTVTPQSRVVIE-GQTVDFQCAAKGHPQPVIAWTKGGSQL---S 471
Query: 306 FDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
D L S ++ + V D G+Y C A NI G+
Sbjct: 472 VDRRH------LVLSSGTLRISGVALHDQGQYECQAVNIIGS 507
Score = 72 (30.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G +VT+ C G P P I W G + + + S + + NV D+
Sbjct: 353 GESVTLECSATGHPLPQITWT-RGD---RTPLPI----DPRVNITPSGGLYIQNVAQSDS 404
Query: 335 GEYTCYAEN 343
GEYTC+A N
Sbjct: 405 GEYTCFASN 413
>UNIPROTKB|F1NN41 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0020037 GO:GO:0031012 GO:GO:0004601
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042744 SUPFAM:SSF48113
GO:GO:0005201 Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325
OMA:EPVITWN EMBL:AADN02002863 EMBL:AADN02002864 IPI:IPI00586612
Ensembl:ENSGALT00000026413 Uniprot:F1NN41
Length = 1416
Score = 264 (98.0 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 78/273 (28%), Positives = 128/273 (46%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + I+E+ F+ L L + L++NQI + F + LK LYL N I +
Sbjct: 5 LRFNRIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQ 64
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L QI ++ ++ HL LE L L+ NR+ HL F ++K L
Sbjct: 65 AFKGLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESMKRLR 124
Query: 208 LDGNPWCCDCHLRSFRNWLLKSKLYSH----PLSCTEPGMLQTKHWDDVKAQEFACP-PN 262
LD N CDC + LLK+ + S +C P +Q + + +E C P
Sbjct: 125 LDSNALHCDCEILWLAE-LLKTYVESGNAQAAATCEYPRRIQGRSVATITPEELNCERPR 183
Query: 263 VTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV 322
+T + V +G V +C G+P+P I+WL N L +++E+ L +
Sbjct: 184 ITSEPQDVDVTSGNTVYFTCRAEGNPKPEIIWLRNNNEL------IMKEDSRLNLLDDG- 236
Query: 323 SITLFNVTDLDAGEYTCYAENIRGNA-SGEISL 354
++ + N + D G Y C A+N+ G + E++L
Sbjct: 237 TLMIQNTQETDQGIYQCMAKNVAGEVKTQEVTL 269
Score = 139 (54.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 41 CKDANFTAL----PSTLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIR 94
C+D F + P ++ L LNNN+I + AF+ L NL+ +YL + I+
Sbjct: 2 CRDLRFNRIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFED--LENLKYLYLYKNEIQ 59
Query: 95 EVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY 154
+ R FK L L ++ L NQI L ++F +L+ L+L+ N I L G F L
Sbjct: 60 SIDRQAFKGLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLES 119
Query: 155 LKTIELQHCQIH 166
+K + L +H
Sbjct: 120 MKRLRLDSNALH 131
Score = 132 (51.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 61 DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWL 120
DL N+I + F+ L NL + L N+ I+ + F+ L L + L N+I +
Sbjct: 4 DLRFNRIKEIQPGEFRR--LKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSI 61
Query: 121 HQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALE 180
+ F G L+ LYL+ N I L F LP L+ + L + +I + HL +++
Sbjct: 62 DRQAFKGLASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESMK 121
Query: 181 SLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+ N L H + + LKT GN
Sbjct: 122 RLRLDSNAL-HCDCEILWLAELLKTYVESGN 151
Score = 104 (41.7 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALF 318
P ++ M + E G NV + C G+PEP I W +G QV + F + EG
Sbjct: 461 PVFASVPSDMTV-EVGTNVQIPCSAQGEPEPVITWNKDGVQVTESGKFHV--SPEG---- 513
Query: 319 EKSVSITLFNVTDLDAGEYTCYAENIRGNASGE--ISLDLPEIN 360
+T+ +V D G Y C A N G +S +S+++P ++
Sbjct: 514 ----YLTIRDVGTADEGRYECVARNTIGYSSVSMVLSVNVPNVS 553
Score = 90 (36.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 38/128 (29%), Positives = 52/128 (40%)
Query: 251 DVKAQE-----FACP--PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHN 303
+VK QE F P P+ I G +VT+ C G P+P I W +
Sbjct: 261 EVKTQEVTLRYFGSPARPSFVIHPQNTEVLVGESVTLECSATGHPQPQITWTKGDRTPLP 320
Query: 304 SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISLD-LPEIN 360
S + G + NV D+GEYTC+A N GN A+ I + LP+
Sbjct: 321 SDPRITITPSGGLYIQ--------NVKQEDSGEYTCFATNSIGNIHATAYIIVQALPQFT 372
Query: 361 LATTLSKT 368
+ T KT
Sbjct: 373 V-TPQDKT 379
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/85 (31%), Positives = 35/85 (41%)
Query: 263 VTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV 322
VT ++ VI G V C G P+P I W G L S D L S
Sbjct: 373 VTPQDKTVIE--GQTVDFPCEAQGYPQPVIAWTKGGGQL---SVDRRH------LVLSSG 421
Query: 323 SITLFNVTDLDAGEYTCYAENIRGN 347
++ + V D G+Y C A NI G+
Sbjct: 422 TLRISRVALHDQGQYECQAVNIIGS 446
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 258 (95.9 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 82/312 (26%), Positives = 146/312 (46%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + +L+R+ L + + F+ L L ++L
Sbjct: 160 SKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLEYISEAAFEGLVNLRYLNLG 217
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + T L RL+ L L+GN + +R G F L L+ + L H Q+ ++ ++A
Sbjct: 218 MCNLKDIPNLTALV--RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 275
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +LE LNL+ N L L +F P L+ + L+ NPW C+C + + +W LK + S
Sbjct: 276 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVL-WLSWWLKETVPS 334
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPE 289
+ C P L+ ++ ++ F C V ++ + G + C G
Sbjct: 335 NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSM 393
Query: 290 PTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
++ WL NG ++ + S+ + L + +++ T NVT D G+YTC N GN
Sbjct: 394 TSVNWLTPNGTLMTHGSYRV----RISVLHDGTLNFT--NVTVQDTGQYTCMVTNSAGNT 447
Query: 349 SGEISLDLPEIN 360
+ +L++ ++
Sbjct: 448 TASATLNVSAVD 459
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/243 (25%), Positives = 109/243 (44%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
GSP T CP C C + +C +P+++ + + L+L N I + + FK
Sbjct: 52 GSPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFK 109
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
L +L+ + L + +R++ F L L ++L DN++ + F +L+ L+L
Sbjct: 110 H--LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 167
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSES 195
NPI + + F ++P L+ ++L + + + + A L L LNL LK +
Sbjct: 168 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNL 227
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLR--SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
L+ L L GN D +R SF+ KL+ L + ++ +DD+K
Sbjct: 228 TALV--RLEELELSGNR--LDL-IRPGSFQGLTSLRKLW---LMHAQVATIERNAFDDLK 279
Query: 254 AQE 256
+ E
Sbjct: 280 SLE 282
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 258 (95.9 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 82/312 (26%), Positives = 146/312 (46%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + +L+R+ L + + F+ L L ++L
Sbjct: 160 SKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLEYISEAAFEGLVNLRYLNLG 217
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + T L RL+ L L+GN + +R G F L L+ + L H Q+ ++ ++A
Sbjct: 218 MCNLKDIPNLTALV--RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 275
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +LE LNL+ N L L +F P L+ + L+ NPW C+C + + +W LK + S
Sbjct: 276 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVL-WLSWWLKETVPS 334
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPE 289
+ C P L+ ++ ++ F C V ++ + G + C G
Sbjct: 335 NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSM 393
Query: 290 PTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
++ WL NG ++ + S+ + L + +++ T NVT D G+YTC N GN
Sbjct: 394 TSVNWLTPNGTLMTHGSYRV----RISVLHDGTLNFT--NVTVQDTGQYTCMVTNSAGNT 447
Query: 349 SGEISLDLPEIN 360
+ +L++ ++
Sbjct: 448 TASATLNVSAVD 459
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/243 (25%), Positives = 109/243 (44%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
GSP T CP C C + +C +P+++ + + L+L N I + + FK
Sbjct: 52 GSPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFK 109
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
L +L+ + L + +R++ F L L ++L DN++ + F +L+ L+L
Sbjct: 110 H--LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 167
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSES 195
NPI + + F ++P L+ ++L + + + + A L L LNL LK +
Sbjct: 168 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNL 227
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLR--SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
L+ L L GN D +R SF+ KL+ L + ++ +DD+K
Sbjct: 228 TALV--RLEELELSGNR--LDL-IRPGSFQGLTSLRKLW---LMHAQVATIERNAFDDLK 279
Query: 254 AQE 256
+ E
Sbjct: 280 SLE 282
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 258 (95.9 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 82/312 (26%), Positives = 146/312 (46%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + +L+R+ L + + F+ L L ++L
Sbjct: 158 SKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLEYISEAAFEGLVNLRYLNLG 215
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + T L RL+ L L+GN + +R G F L L+ + L H Q+ ++ ++A
Sbjct: 216 MCNLKDIPNLTALV--RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 273
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +LE LNL+ N L L +F P L+ + L+ NPW C+C + + +W LK + S
Sbjct: 274 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVL-WLSWWLKETVPS 332
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPE 289
+ C P L+ ++ ++ F C V ++ + G + C G
Sbjct: 333 NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSM 391
Query: 290 PTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
++ WL NG ++ + S+ + L + +++ T NVT D G+YTC N GN
Sbjct: 392 TSVNWLTPNGTLMTHGSYRV----RISVLHDGTLNFT--NVTVQDTGQYTCMVTNSAGNT 445
Query: 349 SGEISLDLPEIN 360
+ +L++ ++
Sbjct: 446 TASATLNVSAVD 457
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 60/243 (24%), Positives = 109/243 (44%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
G+P T CP C C + +C +P+++ + + L+L N I + + FK
Sbjct: 50 GAPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFK 107
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
L +L+ + L + +R++ F L L ++L DN++ + F +L+ L+L
Sbjct: 108 H--LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 165
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSES 195
NPI + + F ++P L+ ++L + + + + A L L LNL LK +
Sbjct: 166 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNL 225
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLR--SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
L+ L L GN D +R SF+ KL+ L + ++ +DD+K
Sbjct: 226 TALV--RLEELELSGNR--LDL-IRPGSFQGLTSLRKLW---LMHAQVATIERNAFDDLK 277
Query: 254 AQE 256
+ E
Sbjct: 278 SLE 280
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 258 (95.9 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 82/312 (26%), Positives = 146/312 (46%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + +L+R+ L + + F+ L L ++L
Sbjct: 158 SKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLEYISEAAFEGLVNLRYLNLG 215
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + T L RL+ L L+GN + +R G F L L+ + L H Q+ ++ ++A
Sbjct: 216 MCNLKDIPNLTALV--RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 273
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +LE LNL+ N L L +F P L+ + L+ NPW C+C + + +W LK + S
Sbjct: 274 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVL-WLSWWLKETVPS 332
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPE 289
+ C P L+ ++ ++ F C V ++ + G + C G
Sbjct: 333 NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSM 391
Query: 290 PTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
++ WL NG ++ + S+ + L + +++ T NVT D G+YTC N GN
Sbjct: 392 TSVNWLTPNGTLMTHGSYRV----RISVLHDGTLNFT--NVTVQDTGQYTCMVTNSAGNT 445
Query: 349 SGEISLDLPEIN 360
+ +L++ ++
Sbjct: 446 TASATLNVSAVD 457
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 61/243 (25%), Positives = 110/243 (45%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
GSP T CP C C + +C + +P+++ + + L+L N I + + FK
Sbjct: 50 GSPPATSCPVACSCSNQASR--VICTRRDLAEVPASIPVNTRYLNLQENGIQVIRTDTFK 107
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
L +L+ + L + +R++ F L L ++L DN++ + F +L+ L+L
Sbjct: 108 H--LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 165
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSES 195
NPI + + F ++P L+ ++L + + + + A L L LNL LK +
Sbjct: 166 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNL 225
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLR--SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
L+ L L GN D +R SF+ KL+ L + ++ +DD+K
Sbjct: 226 TALV--RLEELELSGNR--LDL-IRPGSFQGLTSLRKLW---LMHAQVATIERNAFDDLK 277
Query: 254 AQE 256
+ E
Sbjct: 278 SLE 280
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 258 (95.9 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 82/312 (26%), Positives = 146/312 (46%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + +L+R+ L + + F+ L L ++L
Sbjct: 158 SKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLEYISEAAFEGLVNLRYLNLG 215
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + T L RL+ L L+GN + +R G F L L+ + L H Q+ ++ ++A
Sbjct: 216 MCNLKDIPNLTALV--RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 273
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +LE LNL+ N L L +F P L+ + L+ NPW C+C + + +W LK + S
Sbjct: 274 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVL-WLSWWLKETVPS 332
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPE 289
+ C P L+ ++ ++ F C V ++ + G + C G
Sbjct: 333 NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSM 391
Query: 290 PTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
++ WL NG ++ + S+ + L + +++ T NVT D G+YTC N GN
Sbjct: 392 TSVNWLTPNGTLMTHGSYRV----RISVLHDGTLNFT--NVTVQDTGQYTCMVTNSAGNT 445
Query: 349 SGEISLDLPEIN 360
+ +L++ ++
Sbjct: 446 TASATLNVSAVD 457
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 61/243 (25%), Positives = 109/243 (44%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
GSP T CP C C + +C +P+++ + + L+L N I + + FK
Sbjct: 50 GSPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFK 107
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
L +L+ + L + +R++ F L L ++L DN++ + F +L+ L+L
Sbjct: 108 H--LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 165
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSES 195
NPI + + F ++P L+ ++L + + + + A L L LNL LK +
Sbjct: 166 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNL 225
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLR--SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
L+ L L GN D +R SF+ KL+ L + ++ +DD+K
Sbjct: 226 TALV--RLEELELSGNR--LDL-IRPGSFQGLTSLRKLW---LMHAQVATIERNAFDDLK 277
Query: 254 AQE 256
+ E
Sbjct: 278 SLE 280
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 258 (95.9 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 82/312 (26%), Positives = 146/312 (46%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + +L+R+ L + + F+ L L ++L
Sbjct: 158 SKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLEYISEAAFEGLVNLRYLNLG 215
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ + T L RL+ L L+GN + +R G F L L+ + L H Q+ ++ ++A
Sbjct: 216 MCNLKDIPNLTALV--RLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 273
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +LE LNL+ N L L +F P L+ + L+ NPW C+C + + +W LK + S
Sbjct: 274 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVL-WLSWWLKETVPS 332
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPE 289
+ C P L+ ++ ++ F C V ++ + G + C G
Sbjct: 333 NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSM 391
Query: 290 PTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNA 348
++ WL NG ++ + S+ + L + +++ T NVT D G+YTC N GN
Sbjct: 392 TSVNWLTPNGTLMTHGSYRV----RISVLHDGTLNFT--NVTVQDTGQYTCMVTNSAGNT 445
Query: 349 SGEISLDLPEIN 360
+ +L++ ++
Sbjct: 446 TASATLNVSAVD 457
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 61/243 (25%), Positives = 109/243 (44%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
GSP T CP C C + +C +P+++ + + L+L N I + + FK
Sbjct: 50 GSPPATSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFK 107
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
L +L+ + L + +R++ F L L ++L DN++ + F +L+ L+L
Sbjct: 108 H--LRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 165
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSES 195
NPI + + F ++P L+ ++L + + + + A L L LNL LK +
Sbjct: 166 RNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNL 225
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLR--SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
L+ L L GN D +R SF+ KL+ L + ++ +DD+K
Sbjct: 226 TALV--RLEELELSGNR--LDL-IRPGSFQGLTSLRKLW---LMHAQVATIERNAFDDLK 277
Query: 254 AQE 256
+ E
Sbjct: 278 SLE 280
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 262 (97.3 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 72/244 (29%), Positives = 112/244 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P+ CP C C ++ C T +P + +D LDL +N+I+ + F S
Sbjct: 12 PESATCPAECVCV----DRTVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSS- 66
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+NL+ + L ++ I +H +F L L ++ LS N+I L + F N +L L L+
Sbjct: 67 -LMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSE 125
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N IT + Q +L+ + L I + + + +LE L LNGNRL E
Sbjct: 126 NDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEP--- 182
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L NPW CDC LR R WL K++ + + C P LQ + ++ +
Sbjct: 183 SNARFRQLDLFNNPWNCDCRLRWMRKWLEKAEGQNKTV-CATPLNLQGSSIEILQDKFMT 241
Query: 259 CPPN 262
C N
Sbjct: 242 CSGN 245
Score = 214 (80.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/219 (28%), Positives = 98/219 (44%)
Query: 41 CKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
C+ A LP T +D ++ ++Y+ S I L+ + I + +
Sbjct: 254 CETAEICPLPCTCTGT--TVDCRDSGLTYVPTNLPPST-----TEIRLEQNQISSIPSHS 306
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +DLS N I + FLG L L L GN IT+L++ F L L+ + L
Sbjct: 307 FKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLL 366
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
Q+ + + H+ L L+L N +K +SE F +L TL L NP CDC+L+
Sbjct: 367 NANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNLQ 426
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L+ + + C +P L+ K + + +F C
Sbjct: 427 WLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKFKC 465
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 112 LSDNQIAWLHQDTFLGN-DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHK 170
LS N I+ + ++ + + L+VL L+ N IT + F KL L+ + L ++H
Sbjct: 519 LSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSS 578
Query: 171 DALIHLTALESLNLNGNRLKHLSESVFF-PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
L + LE L+L+GN ++ S S+FF ++ + + GN CDC + +WL +
Sbjct: 579 MVLDEQSNLEILDLSGNNIQCFS-SIFFNKATRIREIKVIGNDLLCDCRILPLMSWLRSN 637
Query: 230 KLYS 233
+S
Sbjct: 638 SSHS 641
Score = 127 (49.8 bits), Expect = 0.00036, P = 0.00036
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L L L+ N + L F L L T+ + + ++ + A L AL L+L+GN +
Sbjct: 730 LTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDIS 789
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS-CTEPGMLQTKHW 249
L +S F ++ +++ N CDC++ F W+ KSK ++ C P + +
Sbjct: 790 FLPQSAFSNLTSITHIAVGSNSLYCDCNMAWFSKWI-KSKFIEAGIARCEYPNTVSNQLL 848
Query: 250 DDVKAQEFACPPNVTIK 266
+ +F C V K
Sbjct: 849 LTAQPYQFTCDSKVPTK 865
Score = 123 (48.4 bits), Expect = 0.00097, P = 0.00097
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAF 75
T S D CP C C + C + N T+ PS + D L L+ N I+ +
Sbjct: 669 TCSDDSNLCPPKCSCL----DRVVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDL 724
Query: 76 KSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLY 135
L +L ++ L ++ + + +TF LT L + +S N++ L F G + L++L
Sbjct: 725 NR--LYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILS 782
Query: 136 LNGNPITELRAGQFPKL 152
L+GN I+ L F L
Sbjct: 783 LHGNDISFLPQSAFSNL 799
>UNIPROTKB|Q86UN2 [details] [associations]
symbol:RTN4RL1 "Reticulon-4 receptor-like 1" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471108 GO:GO:0009986
GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0004872 GO:GO:0045121
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
EMBL:AY250219 EMBL:AF532859 EMBL:BC128608 EMBL:AL834409
EMBL:BK001305 IPI:IPI00328745 RefSeq:NP_848663.1 UniGene:Hs.22917
ProteinModelPortal:Q86UN2 SMR:Q86UN2 STRING:Q86UN2 DMDM:74714017
PRIDE:Q86UN2 Ensembl:ENST00000331238 GeneID:146760 KEGG:hsa:146760
UCSC:uc002ftp.3 CTD:146760 GeneCards:GC17M001786 HGNC:HGNC:21329
HPA:HPA044428 MIM:610461 neXtProt:NX_Q86UN2 PharmGKB:PA134973992
HOGENOM:HOG000116109 HOVERGEN:HBG063707 InParanoid:Q86UN2 KO:K16660
OMA:NCTSHRN OrthoDB:EOG4FXR7G GenomeRNAi:146760 NextBio:85443
Bgee:Q86UN2 CleanEx:HS_RTN4RL1 Genevestigator:Q86UN2
GermOnline:ENSG00000185924 Uniprot:Q86UN2
Length = 441
Score = 252 (93.8 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 73/220 (33%), Positives = 104/220 (47%)
Query: 45 NFTAL-PSTLDSDIQV--LDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
N T + PST + + + LDL +N+ + L E F+ GL+ L +YL G+ +
Sbjct: 87 NITYIHPSTFEGFVHLEELDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGV 144
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F L L + L DN I +L D F+ L L+L+GN + L G F L L + L
Sbjct: 145 FGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLL 204
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
Q+ VH A L L +L L N L L P L+ L L+GNPW C C R
Sbjct: 205 HENQLQWVHHKAFHDLRRLTTLFLFNNSLSELQGECLAPLGALEFLRLNGNPWDCGCRAR 264
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVK---AQEF 257
S WL + + S + C PG+ +H D+K A++F
Sbjct: 265 SLWEWLQRFRGSSSAVPCVSPGL---RHGQDLKLLRAEDF 301
Score = 193 (73.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 64/189 (33%), Positives = 87/189 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ NF A+P + D + + L NN+I L F S ++ L
Sbjct: 25 CPRDCVCY--PAPMTVSCQAHNFAAIPEGIPVDSERVFLQNNRIGLLQPGHF-SPAMVTL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
IY N I +H TF+ L E+DL DN Q+ L +TF G +L LYL ++
Sbjct: 82 W-IYSNN--ITYIHPSTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLS 138
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L AG F L L+ + LQ I + D + L L L L+GN+L L F N
Sbjct: 139 ALPAGVFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVN 198
Query: 203 LKTLSLDGN 211
L L L N
Sbjct: 199 LDRLLLHEN 207
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 74/233 (31%), Positives = 114/233 (48%)
Query: 34 LGKKSALCKDAN-FTALPSTLDSDIQVLD---LNNNKISYLTKEAFKSIGLLNLQRIYLK 89
LG L D+N + LP + S + L+ L N I++L F S+G NL + L+
Sbjct: 216 LGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLG--NLTFLSLQ 273
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQF 149
+ +R + F + LV + L+ NQ+ + + TF L+ L L+ N IT L AG F
Sbjct: 274 WNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIF 333
Query: 150 PKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
L L + L + ++H +L+ LE L+L+ N+L L E +F NL L+L
Sbjct: 334 RDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALH 393
Query: 210 GNPWCCDCHLRSFRNWLLK--SKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
GNPW CDCHL NWL + +L + C P L+ + + ++ CP
Sbjct: 394 GNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQLVCP 446
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 50/188 (26%), Positives = 81/188 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C D +P + + + + L AF S NL
Sbjct: 22 CPMGCDCF----VQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNP--NL 75
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
++ N+ + + D F L L +++++ + L + F L L LN N +
Sbjct: 76 TKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEA 135
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L G F L L+++ LQ Q+ ++ + LT L++LNL N L L E +F P +L
Sbjct: 136 LPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSL 195
Query: 204 KTLSLDGN 211
+TL L N
Sbjct: 196 QTLKLSNN 203
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 47 TALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTI 106
T + S L S + L LN N + L + F+ + L + ++L+ + ++ + R F+ LT
Sbjct: 114 TNIFSNLTS-LGKLTLNFNMLEALPEGLFQHLAAL--ESLHLQGNQLQALPRRLFQPLTH 170
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
L ++L+ N +A L ++ F L+ L L+ N ++ L G F KL L+ + L I
Sbjct: 171 LKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNIS 230
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L LE L L N + HL S+F NL LSL N
Sbjct: 231 ELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWN 275
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 60/205 (29%), Positives = 93/205 (45%)
Query: 48 ALPSTLD---SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
ALP L + ++ L+L N ++ L +E F L +LQ + L N+ + + + F L
Sbjct: 159 ALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHP--LTSLQTLKLSNNALSGLPQGVFGKL 216
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
L E+ L N I+ L F L+ L+L N IT L F L L + LQ
Sbjct: 217 GSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNM 276
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRS--F 222
+ + H L L+L N+L+ ++E F NL++L L N HL + F
Sbjct: 277 LRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYN---AITHLPAGIF 333
Query: 223 RNW--LLKSKLYSHPLSCTEPGMLQ 245
R+ L+K L S+ L+ P + Q
Sbjct: 334 RDLEELVKLYLGSNNLTALHPALFQ 358
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 46/178 (25%), Positives = 84/178 (47%)
Query: 37 KSALCKDANFTALPSTL---DSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGI 93
K+ + + +FT L + + ++ + N ++ +AF GL L+ + + S
Sbjct: 52 KNIIFVETSFTTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFG--GLPRLEDLEVTGSSF 109
Query: 94 REVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLP 153
+ + F LT L ++ L+ N + L + F L+ L+L GN + L F L
Sbjct: 110 LNLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLT 169
Query: 154 YLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+LKT+ L + + ++ LT+L++L L+ N L L + VF +L+ L LD N
Sbjct: 170 HLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSN 227
>UNIPROTKB|Q5VT99 [details] [associations]
symbol:LRRC38 "Leucine-rich repeat-containing protein 38"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471167
HSSP:Q9BZR6 EMBL:AL603749 EMBL:AL354712 EMBL:BC016048
IPI:IPI00059708 RefSeq:NP_001010847.1 UniGene:Hs.657356
ProteinModelPortal:Q5VT99 SMR:Q5VT99 DMDM:74756785 PRIDE:Q5VT99
Ensembl:ENST00000376085 GeneID:126755 KEGG:hsa:126755
UCSC:uc001avb.3 CTD:126755 GeneCards:GC01M013801 HGNC:HGNC:27005
HPA:HPA038778 neXtProt:NX_Q5VT99 eggNOG:KOG0619
HOGENOM:HOG000113369 HOVERGEN:HBG094920 OMA:LDEIQCS
OrthoDB:EOG4GMTXN ChiTaRS:LRRC38 GenomeRNAi:126755 NextBio:81900
Bgee:Q5VT99 CleanEx:HS_LRRC38 Genevestigator:Q5VT99 Uniprot:Q5VT99
Length = 294
Score = 230 (86.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 65/240 (27%), Positives = 120/240 (50%)
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
L+++++ + + I+ + D F + LV +D +N + L + TF G+ +L L L+ N
Sbjct: 56 LDVRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNN 115
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
+T+L AG F L + L + + VH+DA L +L+ L LN N L+ LS +
Sbjct: 116 LTQLGAGAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVAALAAL 175
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLK--SKLYS--HPLSCTEPGMLQTKHWDDVKAQE 256
P L++L LDGNPW CDC +W+ + SKL + C+ P + ++
Sbjct: 176 PALRSLRLDGNPWLCDCDFAHLFSWIQENASKLPKGLDEIQCSLPMESRRISLRELSEAS 235
Query: 257 FA-CPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGD 315
F+ C ++++ + +I +G V+++ + T++ L + + D E+E+ D
Sbjct: 236 FSECRFSLSLTDLCIIIFSGVAVSIAAIISSFFLATVVQCLQRCAPNKDAED--EDEDKD 293
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/164 (28%), Positives = 73/164 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+D ++P D++ L + N+I + ++ F G +L
Sbjct: 28 CPAGCACT---DPHTVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQRIPEDFFIFYG--DL 82
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ +N+ +R + TF LV +DLS N + L F RL L L N +
Sbjct: 83 VYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLVG 142
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ F L L+ +EL + S+ AL L AL SL L+GN
Sbjct: 143 VHEDAFETLESLQVLELNDNNLRSLSVAALAALPALRSLRLDGN 186
>ZFIN|ZDB-GENE-080723-63 [details] [associations]
symbol:zgc:195063 "zgc:195063" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080723-63
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG4THVT6
EMBL:BX510944 EMBL:BC163761 IPI:IPI00611152 RefSeq:NP_001122166.1
UniGene:Dr.110759 Ensembl:ENSDART00000077823 GeneID:558559
KEGG:dre:558559 OMA:PYLINIT NextBio:20882530 Uniprot:B3DK88
Length = 636
Score = 252 (93.8 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 84/351 (23%), Positives = 148/351 (42%)
Query: 24 CPDTCRCKWT-----LGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
CP C C + G +S LC D + + +P + D L + + + EAF +
Sbjct: 21 CPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLDTVKLRVEKTAVRRVPTEAFYYL 80
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+ +++ + I V +F L +L E+ L N IA ++ LK L L+
Sbjct: 81 S--ELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIATFPWESLKEMPSLKTLDLHN 138
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N +T + P L + +++ ++ ++ D + + + N
Sbjct: 139 NRLTSVPVEAAPYLINITYLDISSNKLTTLPSDLVDIWPPFSGIQPSAN----------- 187
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSK-----LYSHPLSCTEPGMLQTKHWDDVK 253
T L L NPW CDC + L K L L+C+ P L + +
Sbjct: 188 -TSQKTVLGLQDNPWYCDCRISKLIE-LSKMAGIPVVLMDQVLTCSGPEHLSGVLFQRAE 245
Query: 254 AQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEE 312
+ P V + + G NV + C G P PT+LW +G V++N+ +++E
Sbjct: 246 LDQ-CVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVNNT---VVQES 301
Query: 313 EGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLAT 363
G+ + S+ ++L ++ DAG+Y C A+N+ GNA I+L + + T
Sbjct: 302 PGEGV-RWSI-LSLHSIVFKDAGDYRCKAKNVAGNAEAYITLSVDGVQPTT 350
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 256 (95.2 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 77/272 (28%), Positives = 125/272 (45%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ F+ L L + L++NQI + +F + LK LYL N I +
Sbjct: 2 LRFNRIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQ 61
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L QI ++ ++ HL LE L L+ NR+ HL F ++K L
Sbjct: 62 AFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMKRLR 121
Query: 208 LDGNPWCCDCHLRSFRNWL---LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP-PNV 263
LD N CDC + + L KS +C P +Q + + +E C P +
Sbjct: 122 LDSNALHCDCEILWLADLLKTYAKSGNAQAAATCEYPRRIQGRSVATITPEELDCERPRI 181
Query: 264 TIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVS 323
T + +G V +C G+P+P I+WL N N+ + + + L + ++
Sbjct: 182 TSEPQDADVTSGNTVFFTCRAEGNPKPEIIWLRN-----NNELSMKTDSRLNLLDDGTLM 236
Query: 324 ITLFNVTDLDAGEYTCYAENIRGNA-SGEISL 354
I N + D G Y C A+N+ G + E++L
Sbjct: 237 IQ--NTQETDQGIYQCMAKNVAGQVKTQEVTL 266
Score = 140 (54.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 61 DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWL 120
DL N+I + AF+ L NL + L N+ I+ + +F+ L L + L N+I +
Sbjct: 1 DLRFNRIREIQPGAFRK--LRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAI 58
Query: 121 HQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALE 180
+ F G L+ LYL+ N I L F LP L+ + L + +I + HL +++
Sbjct: 59 DRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMK 118
Query: 181 SLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+ N L H + + LKT + GN
Sbjct: 119 RLRLDSNAL-HCDCEILWLADLLKTYAKSGN 148
Score = 136 (52.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ L LNNN+I + +F+ L NL+ +YL + I+ + R FK L L ++ L N
Sbjct: 20 NLNTLLLNNNQIKSIPGGSFED--LENLKYLYLYKNEIQAIDRQAFKGLASLEQLYLHFN 77
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
QI L ++F +L+ L+L+ N IT L G F L +K + L +H
Sbjct: 78 QIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMKRLRLDSNALH 128
Score = 118 (46.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALF 318
P +I M + + G NV + C G+PEP I W +G QV + F + EG F
Sbjct: 458 PVFASIPSDMTV-DVGSNVQLPCSSQGEPEPAITWNKDGVQVTESGKFHI--SPEG---F 511
Query: 319 EKSVSITLFNVTDLDAGEYTCYAENIRGNASGE--ISLDLPEIN 360
+T+ +V DAG Y C A N G AS +S+ +P+++
Sbjct: 512 -----LTIHDVGTADAGRYECVARNTIGQASVSMVLSVSVPDVS 550
Score = 113 (44.8 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 111 DLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHK 170
DL N+I + F L L LN N I + G F L LK + L +I ++ +
Sbjct: 1 DLRFNRIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDR 60
Query: 171 DALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN------PWCCDCHLRSFRN 224
A L +LE L L+ N+++ L F P L+ L L N P D HL S +
Sbjct: 61 QAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFD-HLESMK- 118
Query: 225 WLLKSKLYSHPLSC 238
+ +L S+ L C
Sbjct: 119 ---RLRLDSNALHC 129
Score = 80 (33.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 242 GMLQTKHWDDVKAQEFACP--PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQ 299
G ++T+ +V + F P P I+ G +VT+ C G P P I W +
Sbjct: 257 GQVKTQ---EVTLRYFGSPARPAFVIQPQNTEVLVGESVTLECSATGHPPPRITWTKGDR 313
Query: 300 VLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
L E+ ++ S + + NV D+GEYTC+A N
Sbjct: 314 TP-------LPEDPRVSI-TPSGGLFIQNVLQDDSGEYTCFASN 349
Score = 70 (29.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/85 (31%), Positives = 35/85 (41%)
Query: 263 VTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV 322
VT ++ VI G V C G P+P I W G L S D L S
Sbjct: 370 VTPEDRAVIE--GQTVDFQCEAKGYPQPVIAWTKGGSQL---SVDRRH------LVLSSG 418
Query: 323 SITLFNVTDLDAGEYTCYAENIRGN 347
++ + V D G+Y C A NI G+
Sbjct: 419 TLRISGVALHDQGQYECQAVNIIGS 443
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 256 (95.2 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 78/263 (29%), Positives = 123/263 (46%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ F+ L L + L++NQI + + +F + LK LYL N I ++
Sbjct: 57 LRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQH 116
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L + ++ + L LE L L+ N++ + F +LK L
Sbjct: 117 AFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLR 176
Query: 208 LDGNPWCCDCHLRSFRNWLLK-SKLYS--HPLSCTEPGMLQTKHWDDVKAQEFACP-PNV 263
LD N CDC L L K ++L S +C P L + + AQEF C P +
Sbjct: 177 LDSNALLCDCDLLWLAELLQKYAELGSIQTAATCEAPRELHGRSIVTLTAQEFNCERPRI 236
Query: 264 TIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVS 323
T + V G V +C G+P+P I+WL N N+ D+ ++ + L + ++
Sbjct: 237 TSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHN-----NNEIDMKDDNRLNLLQDGTLM 291
Query: 324 ITLFNVTDLDAGEYTCYAENIRG 346
I N + D G Y C A+NI G
Sbjct: 292 IQ--NTKESDKGVYQCMAKNIAG 312
Score = 159 (61.0 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 49/166 (29%), Positives = 75/166 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C +P + +LDL N I + AF+ L NL
Sbjct: 24 CPPRCLCFRT----TVRCMHLMLETIPD-IPPQTSILDLRFNHIREIQPGAFRR--LKNL 76
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L N+ I+ + R +F+ L L + L N+I + Q F G L+ LYL+ N +
Sbjct: 77 NTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLET 136
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
L F LP L+ + L + +I +H L +L+ L L+ N L
Sbjct: 137 LEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 108 (43.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 40/131 (30%), Positives = 55/131 (41%)
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVH 169
+DL N I + F L L LN N I + F L LK + L +I S+
Sbjct: 55 LDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQ 114
Query: 170 KDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LL 227
+ A L +LE L L+ N L+ L F P L+ L L N H +F L
Sbjct: 115 QHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNK-ISRIHPGTFSQLESLK 173
Query: 228 KSKLYSHPLSC 238
+ +L S+ L C
Sbjct: 174 RLRLDSNALLC 184
Score = 102 (41.0 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 270 VIREAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
V+ E G +V ++C GDP PTI W+ G Q+ + F + ++G ++SI
Sbjct: 523 VVAETGQDVAITCAAQGDPRPTITWVKEGIQITESGKFHV--SQDG------TLSIQDLG 574
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDL 356
V D G Y C A N G S + L +
Sbjct: 575 VAD--QGRYECIARNPFGFTSSAMQLTI 600
Score = 90 (36.7 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 38/124 (30%), Positives = 52/124 (41%)
Query: 251 DVKAQE-----FACP--PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHN 303
+VK QE F P P I+ G +VT+ C V G P P I W L
Sbjct: 313 EVKTQEVVLRYFGTPSKPTFVIQPQNTEVLVGESVTLECGVSGHPHPRISWTLG------ 366
Query: 304 SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISL-DLPEIN 360
+ L ++ A+ S + + NVT D G+Y C A N G+ A+ I + D P
Sbjct: 367 -TGSPLPQDPRFAI-TSSGGLFIQNVTFSDQGQYNCNASNTEGSIQATARIIVQDSPRFL 424
Query: 361 LATT 364
L T
Sbjct: 425 LVPT 428
Score = 75 (31.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
+L L N I E++ G F +L L T+ L + QI + + + L L+ L L N ++ +
Sbjct: 54 ILDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSI 113
Query: 193 SESVFFPTPNLKTLSLDGN 211
+ F +L+ L L N
Sbjct: 114 QQHAFHGLRSLEQLYLHFN 132
Score = 73 (30.8 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 26/91 (28%), Positives = 36/91 (39%)
Query: 153 PYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
P ++L+ I + A L L +L LN N++KH+ F NLK L L N
Sbjct: 50 PQTSILDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNE 109
Query: 213 WCCDCHLRSFRNWLLKSKLYSH--PLSCTEP 241
+F +LY H L EP
Sbjct: 110 -IQSIQQHAFHGLRSLEQLYLHFNSLETLEP 139
Score = 48 (22.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/84 (23%), Positives = 31/84 (36%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL--LNGQVLHNSSFDLLEEEEGDAL 317
P + + + E G +V C G P P I W G + N +L G
Sbjct: 421 PRFLLVPTDQTVTE-GQSVDFPCTAEGHPPPVIAWTRAAGGPLPSNRRHSILST--G--- 474
Query: 318 FEKSVSITLFNVTDLDAGEYTCYA 341
++ + V D G+Y C+A
Sbjct: 475 -----TLRVMRVALHDQGQYECHA 493
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 256 (95.2 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 78/263 (29%), Positives = 123/263 (46%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ F+ L L + L++NQI + + +F + LK LYL N I ++
Sbjct: 57 LRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQH 116
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L + ++ + L LE L L+ N++ + F +LK L
Sbjct: 117 AFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLR 176
Query: 208 LDGNPWCCDCHLRSFRNWLLK-SKLYS--HPLSCTEPGMLQTKHWDDVKAQEFACP-PNV 263
LD N CDC L L K ++L S +C P L + + AQEF C P +
Sbjct: 177 LDSNALLCDCDLLWLAELLQKYAELGSIQTAATCEAPRELHGRSIVTLTAQEFNCERPRI 236
Query: 264 TIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVS 323
T + V G V +C G+P+P I+WL N N+ D+ ++ + L + ++
Sbjct: 237 TSEPHDVDVLLGNTVYFTCRAEGNPKPAIIWLHN-----NNEIDMKDDNRLNLLQDGTLM 291
Query: 324 ITLFNVTDLDAGEYTCYAENIRG 346
I N + D G Y C A+NI G
Sbjct: 292 IQ--NTKESDKGVYQCMAKNIAG 312
Score = 159 (61.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 49/166 (29%), Positives = 75/166 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C +P + +LDL N I + AF+ L NL
Sbjct: 24 CPPRCLCFRT----TVRCMHLMLETIPD-IPPQTSILDLRFNHIREIQPGAFRR--LKNL 76
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L N+ I+ + R +F+ L L + L N+I + Q F G L+ LYL+ N +
Sbjct: 77 NTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLET 136
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
L F LP L+ + L + +I +H L +L+ L L+ N L
Sbjct: 137 LEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 40/131 (30%), Positives = 55/131 (41%)
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVH 169
+DL N I + F L L LN N I + F L LK + L +I S+
Sbjct: 55 LDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQ 114
Query: 170 KDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LL 227
+ A L +LE L L+ N L+ L F P L+ L L N H +F L
Sbjct: 115 QHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNK-ISRIHPGTFSQLESLK 173
Query: 228 KSKLYSHPLSC 238
+ +L S+ L C
Sbjct: 174 RLRLDSNALLC 184
Score = 102 (41.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 270 VIREAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
V+ E G +V ++C GDP PTI W+ G Q+ + F + ++G ++SI
Sbjct: 523 VVAETGQDVAITCAAQGDPRPTITWVKEGIQITESGKFHV--SQDG------TLSIQDLG 574
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDL 356
V D G Y C A N G S + L +
Sbjct: 575 VAD--QGRYECIARNPFGFTSSAMQLTI 600
Score = 90 (36.7 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 38/124 (30%), Positives = 52/124 (41%)
Query: 251 DVKAQE-----FACP--PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHN 303
+VK QE F P P I+ G +VT+ C V G P P I W L
Sbjct: 313 EVKTQEVVLRYFGTPSKPTFVIQPQNTEVLVGESVTLECGVSGHPHPRISWTLG------ 366
Query: 304 SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISL-DLPEIN 360
+ L ++ A+ S + + NVT D G+Y C A N G+ A+ I + D P
Sbjct: 367 -TGSPLPQDPRFAI-TSSGGLFIQNVTFSDQGQYNCNASNTEGSIQATARIIVQDSPRFL 424
Query: 361 LATT 364
L T
Sbjct: 425 LVPT 428
Score = 75 (31.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
+L L N I E++ G F +L L T+ L + QI + + + L L+ L L N ++ +
Sbjct: 54 ILDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSI 113
Query: 193 SESVFFPTPNLKTLSLDGN 211
+ F +L+ L L N
Sbjct: 114 QQHAFHGLRSLEQLYLHFN 132
Score = 73 (30.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 26/91 (28%), Positives = 36/91 (39%)
Query: 153 PYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
P ++L+ I + A L L +L LN N++KH+ F NLK L L N
Sbjct: 50 PQTSILDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNE 109
Query: 213 WCCDCHLRSFRNWLLKSKLYSH--PLSCTEP 241
+F +LY H L EP
Sbjct: 110 -IQSIQQHAFHGLRSLEQLYLHFNSLETLEP 139
Score = 48 (22.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/84 (23%), Positives = 31/84 (36%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL--LNGQVLHNSSFDLLEEEEGDAL 317
P + + + E G +V C G P P I W G + N +L G
Sbjct: 421 PRFLLVPTDQTVTE-GQSVDFPCTAEGHPPPVIAWTRAAGGPLPSNRRHSILST--G--- 474
Query: 318 FEKSVSITLFNVTDLDAGEYTCYA 341
++ + V D G+Y C+A
Sbjct: 475 -----TLRVMRVALHDQGQYECHA 493
>UNIPROTKB|I3LDA4 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10
GeneTree:ENSGT00550000074325 CTD:7837 OMA:EPVITWN EMBL:FP102546
EMBL:FP565715 RefSeq:XP_003125453.3 Ensembl:ENSSSCT00000022979
GeneID:100516076 KEGG:ssc:100516076 Uniprot:I3LDA4
Length = 1479
Score = 255 (94.8 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 77/266 (28%), Positives = 122/266 (45%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ FK L L + L++NQI + +F + LK LYL N I +
Sbjct: 69 LRFNRIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQ 128
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L QI ++ ++ HL LE L L+ NR+ +L F ++K L
Sbjct: 129 AFQGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLVPGTFNHLESMKRLR 188
Query: 208 LDGNPWCCDCHLRSFRNWLLKSKLYSH----PLSCTEPGMLQTKHWDDVKAQEFACP-PN 262
LD N CDC + + LLK+ S +C P +Q + + +E C P
Sbjct: 189 LDSNALRCDCEILWLAD-LLKTYARSGNAQAAATCEYPRRIQGRSVATITPEELDCERPR 247
Query: 263 VTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV 322
+T + G V +C G+P+P I+WL N N+ + + + L + ++
Sbjct: 248 ITSEPQDADVTLGNTVFFTCRAEGNPKPEIIWLRN-----NNELSMAADSRLNLLDDGTL 302
Query: 323 SITLFNVTDLDAGEYTCYAENIRGNA 348
I N + D G Y C A+N+ G A
Sbjct: 303 MIQ--NTREADQGVYQCMAKNVAGEA 326
Score = 169 (64.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 56/188 (29%), Positives = 87/188 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C A+P+ +LDL N+I + AFK GL NL
Sbjct: 36 CPSRCLCFRT----TVRCMHLLLEAVPAVAPQT-SILDLRFNRIREIQPGAFK--GLRNL 88
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L N+ I+ + +F+ L L + L N+I + + F G L+ LYL+ N I
Sbjct: 89 NTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAFQGLASLEQLYLHFNQIET 148
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F LP L+ + L + +I + HL +++ L L+ N L+ E + + L
Sbjct: 149 LDPESFQHLPKLERLFLHNNRITYLVPGTFNHLESMKRLRLDSNALRCDCE-ILWLADLL 207
Query: 204 KTLSLDGN 211
KT + GN
Sbjct: 208 KTYARSGN 215
Score = 117 (46.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 33/96 (34%), Positives = 49/96 (51%)
Query: 268 SMVIREAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALFEKSVSITL 326
S V E G +V + C G+PEP I W +G QV + F + EG F +T+
Sbjct: 532 SDVTAEVGSSVQLPCSSQGEPEPAITWNKDGVQVTESGKFHI--SPEG---F-----LTI 581
Query: 327 FNVTDLDAGEYTCYAENIRGNASGE--ISLDLPEIN 360
+V DAG Y C A N G AS +S+++P+++
Sbjct: 582 HDVGTADAGRYECVARNTMGQASVSMLLSVNVPDVS 617
Score = 71 (30.1 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G +VT+ C G P P I W G + + + S + + NV D+
Sbjct: 356 GESVTLECSATGHPPPRITWT-RGD---GTPVPV----DPRVSITPSGGLYIQNVVQEDS 407
Query: 335 GEYTCYAEN 343
GEYTC+A N
Sbjct: 408 GEYTCFAAN 416
Score = 71 (30.1 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 30/102 (29%), Positives = 39/102 (38%)
Query: 250 DDVKAQEF----ACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSS 305
D V A F A P + + E G V C G P+P I W G L S
Sbjct: 419 DSVHATAFIIVQALPQFTVTPQDRAVTE-GQTVDFHCEAKGYPQPVIAWTKGGSPL---S 474
Query: 306 FDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
D L S ++ + +V D G+Y C A NI G+
Sbjct: 475 VDRRH------LVLSSGTLRISSVALHDQGQYECQAVNIIGS 510
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 255 (94.8 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 69/236 (29%), Positives = 109/236 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C + ++P + +++ LDLN N ++ +TK F GL NL
Sbjct: 21 CPSQCSCSGT----AVDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFA--GLKNL 74
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F+ L L + L+ N + L + FLG +L L L+ N I
Sbjct: 75 RVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQG 134
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + QI + A L LE L LN N + LS + F P L
Sbjct: 135 IPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMPKL 194
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDC++ +WL + C P L+ + +V+ +EF C
Sbjct: 195 RTFRLHSNNLLCDCNVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNIAEVQKKEFMC 250
Score = 226 (84.6 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI L D+F G L L L GN IT
Sbjct: 293 ITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKIT 352
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + L +I+ + D+ L L L+L N+L+ +++ F
Sbjct: 353 ELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRA 412
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 413 IQTLHLAQNPFMCDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRC 469
Score = 192 (72.6 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + TF G + L L N + + L L+T+ L
Sbjct: 537 FKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLML 596
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ +I V+ + L+++ L+L N + +S F +L TL+L NP+ C+CHL
Sbjct: 597 RSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLA 656
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ + C P L+ DV Q+FAC
Sbjct: 657 WLGEWLRKKRIVTGNPRCQSPYFLKEIPIQDVAVQDFAC 695
Score = 163 (62.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 56/191 (29%), Positives = 85/191 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C C+ T +P+ L I + L N I + AF L
Sbjct: 264 CPELCTCS----NNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYK--RL 317
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D+F+ L L + L N+I L + F G L++L LN N I
Sbjct: 318 RRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINC 377
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
LR F L L + L ++ ++ K L A+++L HL+++ F +L
Sbjct: 378 LRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTL--------HLAQNPFMCDCHL 429
Query: 204 KTLS--LDGNP 212
K L+ L NP
Sbjct: 430 KWLADYLQDNP 440
Score = 162 (62.1 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 53/192 (27%), Positives = 84/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C T +P + L LNNN+ + L FK L
Sbjct: 489 CPEKCRCEGT----TVDCSGQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 542
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I ++ TF+ + + E+ L+ N++ +H G L+ L L N I+
Sbjct: 543 LRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRIS 602
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ G F L ++ + L I S+ A L +L +LNL N +
Sbjct: 603 CVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWL 662
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 663 RKKRIVTGNPRC 674
Score = 149 (57.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/164 (28%), Positives = 80/164 (48%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
+ E+ L N+ + + L N + L ++ L+ N I+ L F + L T+ L + ++
Sbjct: 739 VTELYLDGNEFTQVPLE--LSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRL 796
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
+ A L +L L+L+GN + + + F +L L+L NP CDCH++ +W
Sbjct: 797 RCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLALGANPLYCDCHMQWLSDW 856
Query: 226 LLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVTI 265
+ KS Y P CT PG + K +++F C P +V+I
Sbjct: 857 V-KSG-YKEPGIARCTGPGDMTDKLLLTTPSKKFTCTGPVDVSI 898
Score = 104 (41.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 36/118 (30%), Positives = 52/118 (44%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N T L A G F KLP L+ I L + +I + + + + L L NRL+ +
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGV 580
Query: 193 SESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLSCTEPGMLQTKH 248
S+ L+TL L N C + SF + LY + ++ PG T H
Sbjct: 581 HYSMLKGLGGLRTLMLRSNRISC-VNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLH 637
Score = 81 (33.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 47 TALPSTL-DS--DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP L D +Q+L LN NKI+ L ++F+ + LNL +Y ++ ++ + + TF
Sbjct: 352 TELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLY--DNKLQTIAKGTFSS 409
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVL--YLNGNPI 141
L + Q L Q+ F+ + LK L YL NPI
Sbjct: 410 LRAI--------QTLHLAQNPFMCDCHLKWLADYLQDNPI 441
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 253 (94.1 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 83/324 (25%), Positives = 146/324 (45%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L L+ N I+ ++ +A++ L + L + + + +F L++L + + +N+
Sbjct: 289 LRELHLSQNAINRISPDAWEFCQ--KLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNK 346
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
++++ F G LK L L N I+ E +G F L L+ + LQ +I S+ K A
Sbjct: 347 VSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAF 406
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L LE L+L+GN + L + F L+ L L+ + CDC LR W+ ++ S
Sbjct: 407 AGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQLRWLPQWVAENNFQS 466
Query: 234 HP-LSCTEPGMLQTKHWDDVKAQEFAC---P-PNVTIKESMVIREAGGNVTMSCYVYG-- 286
SC P +L+ + V F C P P +T++ G +V+ +C
Sbjct: 467 FVNASCAHPQLLKGRSIFTVSPDGFVCDDFPKPQITVQPETQSAIKGSDVSFTCSAASSS 526
Query: 287 DPEPTILWLLNGQVLHNSSFDLLEE--EEGDALFEKSVSITLFNVTDLDAGEYTCYAENI 344
D T W + + L ++ + +G L E + + L NV G+Y C N
Sbjct: 527 DSPMTFAWKKDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGKYQCVISNH 586
Query: 345 RGNASGEISLDLPEINLATTLSKT 368
G+ S + L IN+ + +KT
Sbjct: 587 FGS-SYSVKAKLT-INMLPSFTKT 608
Score = 186 (70.5 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 48/160 (30%), Positives = 86/160 (53%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S+++VL L++N ++ +TK GLL L+ ++L + I + D +++ L E+DL+
Sbjct: 263 SNMEVLQLDHNNLTEITKGWL--YGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTF 320
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD--- 171
N ++ L +FLG L L++ N ++ + F L LKT++L++ +I +D
Sbjct: 321 NHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSG 380
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
A L L L L GNR++ +++ F L+ L L GN
Sbjct: 381 AFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGN 420
Score = 164 (62.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 57/190 (30%), Positives = 86/190 (45%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
L S + VL LN N+IS + + FK L LQ + L + I+ V TF+ L L + +
Sbjct: 190 LASTLLVLKLNRNRISAIPPKMFK---LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKM 246
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
N + L F G ++VL L+ N +TE+ G L L+ + L I+ + DA
Sbjct: 247 QRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDA 306
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP--WCCDCHLRSFRNWLLKS- 229
L L+L N L L +S F L L + N + DC R + LK+
Sbjct: 307 WEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTS--LKTL 364
Query: 230 KLYSHPLSCT 239
L ++ +S T
Sbjct: 365 DLRNNEISWT 374
Score = 134 (52.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C LG C LP L + + LDL++N++S++ + L +L
Sbjct: 47 CPAACHC---LGDLLD-CSRRRLVRLPDPLPAWVTRLDLSHNRLSFIQTSSLSH--LQSL 100
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L N+ + + + + ++ L+ N I + + L+ L L+ N I+E
Sbjct: 101 QEVKLNNNELETIP-NLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISE 159
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA-LESLNLNGNRLKHLSESVFFPTPN 202
LR FP L LK + + + ++ S+ +L + L L LN NR+ + +F P
Sbjct: 160 LRTA-FPPLQ-LKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMF-KLPQ 216
Query: 203 LKTLSLDGN 211
L+ L L+ N
Sbjct: 217 LQHLELNRN 225
Score = 132 (51.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 46/168 (27%), Positives = 84/168 (50%)
Query: 47 TALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL--NLQRIYLKNSGIREVHRDTFKYL 104
T+ S L S +Q + LNNN++ E ++G + N++++ L + I ++ + +
Sbjct: 91 TSSLSHLQS-LQEVKLNNNEL-----ETIPNLGSISANIRQLSLAGNAIDKILPEQLEAF 144
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY-LKTIELQHC 163
L +DLS+N I+ L T +LK LY+N N ++ + G F L L ++L
Sbjct: 145 QSLETLDLSNNNISELR--TAFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRN 202
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+I ++ + L L+ L LN N++K++ F LK+L + N
Sbjct: 203 RISAI-PPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRN 249
Score = 85 (35.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 269 MVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+ IR AG + C G P P I W +G + F E + E V + +
Sbjct: 612 LTIR-AGAMARLECAAVGHPAPQIAWQKDG----GTDFPAARERRMHVMPEDDVFF-IVD 665
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPE 358
V D G Y+C A+N G+ S +L + E
Sbjct: 666 VKIEDIGVYSCTAQNSAGSVSANATLTVLE 695
Score = 65 (27.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + C G P P + W + L ++ E A + + I +V+D A
Sbjct: 711 GETAVLQCIAGGSPPPRLNWTKDDSPL------VVTERHFFAAGNQLLIIVDSDVSD--A 762
Query: 335 GEYTCYAENIRGNASGEISLDL 356
G+YTC N G G + L +
Sbjct: 763 GKYTCEMSNTLGTERGNVRLSV 784
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 200 TPNLKTLSLDGNPW 213
+P++ SLDG+ W
Sbjct: 792 SPHMTAPSLDGDGW 805
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 253 (94.1 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 69/236 (29%), Positives = 110/236 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ F +P + + + LDL+ N I+ +TK F GL NL
Sbjct: 25 CPHKCSCSGS----HVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKVDFS--GLKNL 78
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ ++L+N+ I + R F+ L L + L+ N++ L + F +L L L+ N I
Sbjct: 79 RVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQA 138
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F + +K ++L I + A L LE L LN N + + S F P L
Sbjct: 139 VPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSSFNHMPKL 198
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+TL L N CDCHL +WL + + + C P ++ + DV+ +EF C
Sbjct: 199 RTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCMAPAHMRGLNVPDVQKREFVC 254
Score = 229 (85.7 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 56/174 (32%), Positives = 88/174 (50%)
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
I L+ + I+ + F L +DLS NQI+ + +D F G L L L GN I E+
Sbjct: 304 IRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIP 363
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKT 205
G F L L+ + L +I+ + + L L L+L N+L+ +S+ +F P +KT
Sbjct: 364 KGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKT 423
Query: 206 LSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L L NP+ CDCHL+ ++L + + + C+ P L K VK ++F C
Sbjct: 424 LHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRC 477
Score = 200 (75.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 49/159 (30%), Positives = 80/159 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N++ + + F G + L L GN + + F L LKT+ L
Sbjct: 545 FKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLML 604
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ QI V L+++ L+L NR+ ++ F +L T++L NP+ CDCHL
Sbjct: 605 RSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCHLA 664
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K+++ S C +P L+ DV +F+C
Sbjct: 665 WLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVAMPDFSC 703
Score = 164 (62.8 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 50/170 (29%), Positives = 76/170 (44%)
Query: 18 SPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKS 77
+P T CP C C + C+ T +P+ L I + L N I + AF +
Sbjct: 266 APQVTICPAACTCNNNIVD----CRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAFST 321
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
L+RI L + I E+ D F L L + L N+IA + + F G L++L LN
Sbjct: 322 YK--KLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLN 379
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
N I LR F L L + L ++ ++ K L A+++L+L N
Sbjct: 380 ANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQN 429
Score = 163 (62.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 55/192 (28%), Positives = 88/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKE-AFKSIGLLN 82
CP+ CRC+ T+ C + T +P L L LN+N+IS L AFK L N
Sbjct: 497 CPERCRCEGTVVD----CSNLKLTKIPPHLPEHTTDLRLNDNEISILEATGAFKK--LPN 550
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ +R++ F ++E+ L+ N++ + F G LK L L N I+
Sbjct: 551 LRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQIS 610
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 611 CVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCHLAWLGLWL 670
Query: 203 LKTLSLDGNPWC 214
KT + GNP C
Sbjct: 671 KKTRVVSGNPRC 682
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/155 (30%), Positives = 70/155 (45%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGN-DRLKVLYLNGNPITELRAGQ 148
N G+R + + K T E+ L N + + ++ L N +L +L L+ N I+ L
Sbjct: 733 NRGLRSLPKTIPKDTT---ELYLEGNLLTSVPKE--LPNLKQLTLLDLSNNSISHLAPLT 787
Query: 149 FPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
F + L T+ L + QI V A L +L L L+GN L + E F +L L+L
Sbjct: 788 FSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLAL 847
Query: 209 DGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEP 241
NP CDC LR W+ + P CT P
Sbjct: 848 GANPLYCDCELRWLSQWVKAG--FKEPGIARCTGP 880
Score = 134 (52.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP++C C T+ + C + +LP T+ D L L N ++ + KE
Sbjct: 713 PSAPRCPESCTCSETVVR----CSNRGLRSLPKTIPKDTTELYLEGNLLTSVPKEL---P 765
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L L + L N+ I + TF +T L + LS NQI + F G L++L L+G
Sbjct: 766 NLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHG 825
Query: 139 NPITELRAGQFPKLPYLKTIEL 160
N ++ + G F L L + L
Sbjct: 826 NDLSTVPEGAFNHLTSLSHLAL 847
Score = 119 (46.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/118 (33%), Positives = 55/118 (46%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N I+ L A G F KLP L+ I L + ++ + + A + L L GN+L+ +
Sbjct: 529 LRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSV 588
Query: 193 SESVFFPTPNLKTLSLDGNPWCC--DCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKH 248
S +F LKTL L N C + + L S LY + +S PG T H
Sbjct: 589 SGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLS-LYDNRISTIAPGAFNTLH 645
Score = 86 (35.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 35/103 (33%), Positives = 53/103 (51%)
Query: 38 SALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVH 97
S + +DA F+ L S L S L L NKI+ + K F GL++LQ + L + I +
Sbjct: 336 SEIAEDA-FSGLRS-LTS----LVLYGNKIAEIPKGLFD--GLVSLQLLLLNANKINCLR 387
Query: 98 RDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
+TFK L L + L DN++ + + F +K L+L NP
Sbjct: 388 VNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQNP 430
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 246 (91.7 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 79/242 (32%), Positives = 121/242 (50%)
Query: 34 LGKKSALCK---DAN-FTALPSTLDSDI---QVLDLNNNKISYLTKEAFKSIGLLNLQRI 86
LG S+L + D N T L L S + ++L L +N I +L F S L NL +
Sbjct: 213 LGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSS--LHNLTFL 270
Query: 87 YLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRA 146
LK++ +R + F + L+ + LS NQ+ + + F RL L L+ N IT+L
Sbjct: 271 SLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPE 330
Query: 147 GQFPKLPYLKTIELQHCQIHSVHKDALIH-LTALESLNLNGNRLKHLSESVFFPTPNLKT 205
F L L + L + ++H AL H L+ L+ LNL+ N+L L +F +L
Sbjct: 331 HVFRNLEQLVKLSLDSNNLTALHP-ALFHNLSRLQLLNLSRNQLTTLPGGIFDTNYDLFN 389
Query: 206 LSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS-----CTEPGMLQTKHWDDVKAQEFACP 260
L+L GNPW CDCHL +WL +LY++ +S C P L+ + ++K ++ CP
Sbjct: 390 LALLGNPWQCDCHLSYLTSWL---RLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQLICP 446
Query: 261 PN 262
N
Sbjct: 447 VN 448
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 64 NNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQD 123
N ++ +L +AF GL LQ + + S + + F L+ L ++ L +++A L +D
Sbjct: 82 NTQVRHLEPDAFG--GLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPED 139
Query: 124 TFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLN 183
F D L+ L L GN + L F L L+T+ L + + K A LT L+ L
Sbjct: 140 LFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLK 199
Query: 184 LNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ N L L E +L+ L LDGN
Sbjct: 200 LSNNMLARLPEGALGSLSSLQELFLDGN 227
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
D++ L+L N ++ L K AF+S L LQ + L N+ + + L+ L E+ L N
Sbjct: 170 DLRTLNLAQNLLTQLPKGAFQS--LTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGN 227
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I L F L++L+L N I L F L L + L+ + ++ + H
Sbjct: 228 AITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAH 287
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYS 233
L L+L+ N+L+ + E F L +L+L N D FRN L+K L S
Sbjct: 288 NQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNA-ITDLPEHVFRNLEQLVKLSLDS 346
Query: 234 HPLSCTEPGM 243
+ L+ P +
Sbjct: 347 NNLTALHPAL 356
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/155 (30%), Positives = 76/155 (49%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L L N++ L F+S L +L+ + L + + ++ + F+ LT L + LS+N
Sbjct: 147 LESLQLQGNQLRTLPGRLFQS--LRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNM 204
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+A L + L+ L+L+GN ITEL F +L L+ + LQH I + L
Sbjct: 205 LARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSL 264
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+L N L+ L E +F L LSL N
Sbjct: 265 HNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYN 299
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/158 (27%), Positives = 79/158 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L++ + +S L+ F ++ +L+++ L + + D F ++ IL + L NQ
Sbjct: 99 LQDLEITGSPVSNLSAHIFSNLS--SLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQ 156
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L F L+ L L N +T+L G F L L+ ++L + + + + AL L
Sbjct: 157 LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSL 216
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWC 214
++L+ L L+GN + LS +F +L+ L L N C
Sbjct: 217 SSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAIC 254
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
L +V + Q+ L D F G RL+ L + G+P++ L A F L L+ + L ++
Sbjct: 75 LTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLA 134
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ +D H+ LESL L GN+L+ L +F +L+TL+L N
Sbjct: 135 GLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQN 179
>ZFIN|ZDB-GENE-090312-22 [details] [associations]
symbol:mxra5 "matrix-remodelling associated 5"
species:7955 "Danio rerio" [GO:0048010 "vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005021 "vascular
endothelial growth factor-activated receptor activity"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 ZFIN:ZDB-GENE-090312-22 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104014 EMBL:BX322647 IPI:IPI00898560
Ensembl:ENSDART00000113486 Uniprot:F1QPU8
Length = 2480
Score = 215 (80.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 57/210 (27%), Positives = 100/210 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C + +P+ + ++ ++L N I +T +F GL +
Sbjct: 27 CPRPCACHQPV---EVHCTFRSLLTVPAGVPKQVERMNLGFNTIHKITYSSFA--GLRKM 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + + + + ++ TF+ L L + LS N++ L + T +G L L+L+ N +
Sbjct: 82 ELLLMHGNNVHQIPDGTFRDLISLQMLKLSYNKLKLLSRQTLMGLWSLTRLHLDHNRLEF 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHK------DALIH--LTALESLNLNGNRLKHLSES 195
+ F L L+ + L+ Q+ +H L H ++ L+ L L+ N L LS+
Sbjct: 142 IHPDAFQGLTNLRLLHLEGNQLQQLHPATFSTFSVLGHFPVSTLKHLYLSDNILTTLSQK 201
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
+ P L++LSL GNPW CDC +R F W
Sbjct: 202 MLASMPYLESLSLHGNPWTCDCRMRWFNEW 231
Score = 94 (38.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 267 ESMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFE-KSVSI 324
E++ E G V +C G P P+I W+ +G LH S F G LF + ++
Sbjct: 1704 ENVTFPE-GSTVYFNCSARGAPPPSINWITPDGMQLHPSQFI-----NGRNLFVFPNGTL 1757
Query: 325 TLFNVTDLDAGEYTCYAENIRGNASGEISL 354
L +++ DAG Y C N+ GNA I L
Sbjct: 1758 HLHSLSLTDAGRYECSVTNVIGNARRAIIL 1787
Score = 89 (36.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
GG + + C G+PEP I+W + L ++ + + A + ++++ +VT+ +
Sbjct: 1813 GGRLHLDCITSGNPEPRIIWRTPSKKLVDAHYSYDSRIKVSA----NGTLSIISVTEKED 1868
Query: 335 GEYTCYAENIRGN 347
GEY C A N G+
Sbjct: 1869 GEYLCVARNKIGD 1881
Score = 85 (35.0 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C G P+P I W+L N +V+H+S E ++ ++ + ++ +D
Sbjct: 1610 GQTIEFECQSKGHPQPRITWVLPNKEVVHSSVPTHGTPEHMISVLPNG-TLHMKSINQMD 1668
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATTLSK 367
G Y C A N G + IS+ L LA + +
Sbjct: 1669 RGIYKCIASNAAG--ADAISVRLTVATLAPIIQQ 1700
Score = 84 (34.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 29/94 (30%), Positives = 40/94 (42%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGD-----ALFEKSVSITLFNV 329
G N+ + C G P P I W L + NS E G +F+ ++ L V
Sbjct: 1910 GDNLKVDCVASGLPNPKIQWALPDGTMINSVIKS-ERNVGSRTRRYVVFDNG-TLLLNEV 1967
Query: 330 TDLDAGEYTCYAENIRG----NASGEISLDLPEI 359
+ G YTCYAEN G N ++ D+P I
Sbjct: 1968 GMHEEGNYTCYAENQVGKDEMNVHVKVVADVPVI 2001
Score = 84 (34.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 32/116 (27%), Positives = 46/116 (39%)
Query: 251 DVKAQEFACPPNVTIKESMVIREA-GGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDL 308
+V + A P + K VIR G +V++ C G+P P +LW + + +SS
Sbjct: 1989 NVHVKVVADVPVIVNKTQDVIRVLYGESVSLQCSAKGEPTPLVLWFSPTNRAITSSSDKY 2048
Query: 309 LEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN----ASGEISLDLPEIN 360
G + +K V D G Y C A N G EI + P IN
Sbjct: 2049 FIHNNGTLIIKK--------VQRFDGGNYICLARNSAGQDRKVTRVEILVSPPAIN 2096
Score = 66 (28.3 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 258 ACPPNVTIKES-MVIREAGGNVTMSCYVYGDPEPTILWLL--NGQVLHNSSFDLLEEEEG 314
A PP +T + + G V ++C G P+ + W +++ + L+ G
Sbjct: 2382 AYPPRITSGPAPATYAKRGVAVQLNCLAIGIPKAEVAWETPDRTRLIVSPQPRLI----G 2437
Query: 315 DALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ S+ + N T DAG Y C A N+ G
Sbjct: 2438 NKYLHPQGSLIIQNPTTKDAGLYRCTARNVVG 2469
Score = 64 (27.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 27/95 (28%), Positives = 40/95 (42%)
Query: 255 QEFACPP--NVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEE 311
+E + PP I E V R AG ++ C G P+ I W+L NG ++ N ++
Sbjct: 563 EESSSPPPGGEGISEP-VTRFAGEPFSLPCAATGSPDADIHWILPNGSIV-NKWLNISRI 620
Query: 312 EEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ S+ + N D G Y C A N G
Sbjct: 621 SVAS-----NGSLVIQNSQLSDNGYYKCVAGNQHG 650
Score = 56 (24.8 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 17/81 (20%), Positives = 36/81 (44%)
Query: 280 MSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDAL-FEKSVSITLFNVTDLDAGEYT 338
+ C G P P ++W+L V+ + + G + ++ ++ + +V D+G+
Sbjct: 2117 IDCDATGTPAPRVMWVLPENVVLPAPY------YGSRMTVYRNGTLDIRSVRMTDSGQLA 2170
Query: 339 CYAENIRGNASGEISLDLPEI 359
C A N G + L + +I
Sbjct: 2171 CIARNEGGETKFIVQLHVTDI 2191
Score = 51 (23.0 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHNSS-FD-LLEEEEGDALFEKSVSITLFNVTD 331
G + ++C P + W+L NG L + + F+ L +G ++ + N
Sbjct: 2210 GRTINLNCSFEISPTLQLTWILQNGSPLQSGAQFNKFLHRADG--------TLVISNPAL 2261
Query: 332 LDAGEYTCYAENIRGNASGEISL---DLPEIN 360
++G Y C N G ++L PEI+
Sbjct: 2262 SESGTYRCLGRNAAGMVERTVTLIPGHKPEIS 2293
Score = 46 (21.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 318 FEKSVSITLF--NVTDLDAGEYTCYAEN 343
FE S + TL V LD G+Y C +N
Sbjct: 1550 FEVSSNGTLIIHKVIPLDQGQYLCSVQN 1577
Score = 43 (20.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 333 DAGEYTCYAENIRGNA 348
D G YTC A N G++
Sbjct: 2357 DRGSYTCRASNEYGSS 2372
Score = 42 (19.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 13/69 (18%), Positives = 27/69 (39%)
Query: 275 GGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G ++C V+ ++ W+L +G + E S + + ++ D
Sbjct: 484 GSPTKINCTVHSSGNESVKWMLPDGSTIETP----YRNSENRLSASSSGLLEIKSLDHSD 539
Query: 334 AGEYTCYAE 342
+G Y C A+
Sbjct: 540 SGVYYCIAQ 548
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 252 (93.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 70/236 (29%), Positives = 106/236 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C +P + + + LDLN N I+ +TK F GL +L
Sbjct: 24 CPAQCSCSGS----TVDCHGLALRGVPRNIPRNTERLDLNGNNITRITKTDFA--GLRHL 77
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F+ L L + L+ N + L + FLG +L L L+ N I
Sbjct: 78 RVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQA 137
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + QI + A L LE L LN N + LS + F P L
Sbjct: 138 IPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 197
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 198 RTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAHLRGHNVAEVQKREFVC 253
Score = 230 (86.0 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 58/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI+ D F G L L L GN IT
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 357
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + L +I+ + DA L L L+L N+L+ +++ F P
Sbjct: 358 ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 417
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 418 IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 474
Score = 197 (74.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/159 (30%), Positives = 82/159 (51%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G + L L N + +R F L LKT+ L
Sbjct: 550 FKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLML 609
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ ++ V D+ L+++ L+L N++ ++ F +L TL+L NP+ C+CHL
Sbjct: 610 RSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLA 669
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+WL K ++ + C +P L+ DV Q+F C
Sbjct: 670 WLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 708
Score = 152 (58.6 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 51/192 (26%), Positives = 83/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + +P + L LNNN+ S L FK L
Sbjct: 502 CPEKCRCEGT----TVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKK--LPQ 555
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I ++ F + + E+ L+ N++ + F G + LK L L N ++
Sbjct: 556 LRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVS 615
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI +V + L +L +LNL N +
Sbjct: 616 CVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWL 675
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 676 RKKRIVTGNPRC 687
Score = 143 (55.4 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQ 148
N G++ + + K +T E+ L NQ + ++ L N + L ++ L+ N I+ L
Sbjct: 738 NKGLKALPKGIPKDVT---ELYLDGNQFTLVPKE--LSNYKHLTLIDLSNNRISTLSNQS 792
Query: 149 FPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
F + L T+ L + ++ + L +L L+L+GN + + E F L L++
Sbjct: 793 FSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 852
Query: 209 DGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVT 264
NP CDC+++ +W+ KS+ Y P C PG + K +++F C P +V
Sbjct: 853 GANPLYCDCNMQWLSDWV-KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVN 910
Query: 265 I 265
I
Sbjct: 911 I 911
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA--FKSIGLL 81
CP C C T+ + C + ALP + D+ L L+ N+ + + KE +K + L+
Sbjct: 723 CPAECTCLDTVVR----CSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLI 778
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + +F +T L+ + LS N++ + TF G L++L L+GN I
Sbjct: 779 DLS-----NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDI 833
Query: 142 TELRAGQFPKLPYLKTIEL 160
+ + G F L L + +
Sbjct: 834 SVVPEGAFNDLSALSHLAI 852
Score = 117 (46.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N + L A G F KLP L+ I L + +I + + A + + L L NRL+ +
Sbjct: 534 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 593
Query: 193 SESVFFPTPNLKTLSLDGNPWCC--DCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKH 248
+ +F +LKTL L N C + + L S LY + ++ PG T H
Sbjct: 594 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLS-LYDNQITTVAPGSFDTLH 650
Score = 81 (33.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP L +Q+L LN NKI+ L +AF+ + LNL +Y ++ ++ + + TF
Sbjct: 357 TELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY--DNKLQTIAKGTFSP 414
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVL--YLNGNPI 141
L + Q L Q+ F+ + LK L YL+ NPI
Sbjct: 415 LRAI--------QTLHLAQNPFICDCHLKWLADYLHTNPI 446
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 251 (93.4 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 78/271 (28%), Positives = 121/271 (44%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ FK L L + L++N I + ++ F G + L LYL N I L
Sbjct: 57 LRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQ 116
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + + Q+ + + L LE L L+ N+L + F +LK L
Sbjct: 117 TFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLR 176
Query: 208 LDGNPWCCDCHLRSFRNWLLKSKLYSHP---LSCTEPGMLQTKHWDDVKAQEFACP-PNV 263
LD N CDC L L + H +C P L + V +EF C P +
Sbjct: 177 LDSNALVCDCDLMWLGELLQGFAQHGHTQAAATCEYPRRLHGRAVASVTVEEFNCQSPRI 236
Query: 264 TIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVS 323
T + V +G V +C G+P+P I+W+ N N S DL E++ +F+ +
Sbjct: 237 TFEPQDVEVPSGNTVYFTCRAEGNPKPEIIWIHN-----NHSLDL-EDDTRLNVFDDG-T 289
Query: 324 ITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
+ + N + D G Y C A N G A + ++
Sbjct: 290 LMIRNTRESDQGVYQCMARNSAGEAKTQSAM 320
Score = 159 (61.0 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 49/166 (29%), Positives = 80/166 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K + C +P + VLDL N+I + AFK L NL
Sbjct: 24 CPSRCLCF----KSTVRCMHLMLDHIPQ-VPQQTTVLDLRFNRIREIPGSAFKK--LKNL 76
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L N+ IR++ R+ F+ L L+ + L N+I L + TF G L+ LY++ N +
Sbjct: 77 NTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKGLISLEHLYIHFNQLEM 136
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
L+ F L L+ + L + ++ + + +L +L+ L L+ N L
Sbjct: 137 LQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNAL 182
Score = 101 (40.6 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 273 EAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALFEKSVSITLFNVTD 331
E G N+ +SC+ G+P+P I W G Q+ + F + ++EG ++T+++
Sbjct: 523 EVGKNINISCHAQGEPQPIITWNKEGVQITESGKFHV--DDEG--------TLTIYDAGF 572
Query: 332 LDAGEYTCYAENIRGNASGEISLDLPEI 359
D G Y C A N G A + L + I
Sbjct: 573 PDQGRYECVARNSFGLAVTNMFLTVTAI 600
Score = 95 (38.5 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 38/131 (29%), Positives = 56/131 (42%)
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVH 169
+DL N+I + F L L LN N I ++ F L L + L +IH++
Sbjct: 55 LDLRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALD 114
Query: 170 KDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LL 227
K L +LE L ++ N+L+ L F L+ L L N SF N L
Sbjct: 115 KQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNK-LSKIPAGSFSNLDSLK 173
Query: 228 KSKLYSHPLSC 238
+ +L S+ L C
Sbjct: 174 RLRLDSNALVC 184
Score = 85 (35.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + T+ C G P P I W ++ +L +G S + L N+T D
Sbjct: 344 GTSTTLECMATGHPHPLITWT------RDNGLEL----DGSRHVATSSGLYLQNITQRDH 393
Query: 335 GEYTCYAENIRGN--ASGEISLDLP 357
G +TC+A N G A+ I + P
Sbjct: 394 GRFTCHANNSHGTVQAAANIIVQAP 418
Score = 67 (28.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 27/105 (25%), Positives = 40/105 (38%)
Query: 260 PPNVTI--KESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDAL 317
PP T+ K+ +V+ E V C G+P P I+W G L EG
Sbjct: 418 PPQFTVTPKDQVVLEEHA--VEWLCEADGNPPPVIVWTKTGGQL---------PVEGQHT 466
Query: 318 FEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLA 362
S ++ + D G+Y C A + G + L + LA
Sbjct: 467 VLSSGTLRIDRAAQHDQGQYECQAVSSLGVKKVSVQLTVKPKALA 511
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 222 (83.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 57/209 (27%), Positives = 108/209 (51%)
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
L+++++ + + I+++ D F + LV +D +N + L + TF G+ +L L L+ N
Sbjct: 60 LDVRKLLVAGNRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNN 119
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
+T+L AG F L + L + + VH+ A L +L+ L LN N L+ L+ +
Sbjct: 120 LTQLGAGAFRSAGRLVKLSLANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAALDAL 179
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLK--SKLYS--HPLSCTEPGMLQTKHWDDVKAQE 256
P L+T+ LDGNPW CDC +W+ + SKL + C+ P + ++
Sbjct: 180 PALRTVRLDGNPWLCDCDFAHLFSWIQENTSKLPKGLDAIQCSLPMEDRRVALRELSEAS 239
Query: 257 FA-CPPNVTIKESMVIREAGGNVTMSCYV 284
F+ C ++++ + +I +G V+++ +
Sbjct: 240 FSECKFSLSLTDLFIIIFSGVAVSIAAII 268
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 44/164 (26%), Positives = 73/164 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+D ++P D++ L + N+I + ++ F G +L
Sbjct: 32 CPAGCACT---DPHTVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQQIPEDFFIFHG--DL 86
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ +N+ +R + TF L +DLS N + L F RL L L N +
Sbjct: 87 VYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNHLAG 146
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ F L L+ +EL + S++ AL L AL ++ L+GN
Sbjct: 147 VHEAAFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDGN 190
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 250 (93.1 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 69/236 (29%), Positives = 107/236 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C ++P ++ + + LDLN N I+ +TK F GL +L
Sbjct: 28 CPAQCSCSGS----TVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTDFA--GLRHL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F+ L L + L+ N + + FLG +L L L+ N I
Sbjct: 82 RVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQA 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + QI + A L LE L LN N + LS + F P L
Sbjct: 142 IPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 201
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 202 RTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 227 (85.0 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F P
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 421
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 422 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 478
Score = 189 (71.6 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 46/159 (28%), Positives = 81/159 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++ S+N+I + + F G + + L N + ++ F L LKT+ L
Sbjct: 554 FKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLML 613
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ +I V D+ I L+++ L+L N++ ++ F +L TL+L NP+ C+C+L
Sbjct: 614 RSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLA 673
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ + C +P L+ DV Q+F C
Sbjct: 674 WLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 712
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/192 (26%), Positives = 83/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + T +P + L LNNN+ + L FK L
Sbjct: 506 CPEKCRCEGT----TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 559
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I N+ I ++ F+ + E+ L+ N++ + F G + LK L L N I+
Sbjct: 560 LRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 619
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L +L +LNL N +
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWL 679
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 680 RKKRIVTGNPRC 691
Score = 135 (52.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
+ E+ L N + ++ + L ++ L+ N I+ L F + L T+ L + ++
Sbjct: 756 VTELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 814
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
+ L +L L+L+GN + + E F L L++ NP CDC+++ +W+
Sbjct: 815 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWV 874
Query: 227 LKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFACPPNVTI 265
KS+ Y P C PG + K +++F C V I
Sbjct: 875 -KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDI 913
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T+ + C + LP + D+ L L+ N + + KE + +L
Sbjct: 727 CPTECTCLDTVVR----CSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYN---YKHL 779
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + +F +T L+ + LS N++ + TF G L++L L+GN I+
Sbjct: 780 TLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISV 839
Query: 144 LRAGQFPKLPYLKTIEL 160
+ G F L L + +
Sbjct: 840 VPEGAFSDLSALSHLAI 856
Score = 115 (45.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 37/119 (31%), Positives = 53/119 (44%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N T L A G F KLP L+ I + +I + + A + + L NRL+++
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 597
Query: 193 SESVFFPTPNLKTLSLDGNPWCC---DCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKH 248
+F +LKTL L N C D + LL LY + ++ PG T H
Sbjct: 598 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLS--LYDNQIATIAPGAFDTLH 654
Score = 84 (34.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP +L +Q+L LN NKI+ L +AF+ + LNL +Y ++ ++ + + TF
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY--DNKLQTIAKGTFSP 418
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVL--YLNGNPI 141
L + Q L Q+ F+ + LK L YL+ NPI
Sbjct: 419 LRAI--------QTMHLAQNPFICDCHLKWLADYLHTNPI 450
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 249 (92.7 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 71/238 (29%), Positives = 103/238 (43%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP C C + C A A+P + + L+LN N I+ + K F +GL
Sbjct: 32 TACPALCTCTGA----TVDCHGAGLQAIPKNIPRSTERLELNGNNITRIHKNDF--VGLK 85
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
L+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N I
Sbjct: 86 QLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTI 145
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F LK ++L QI + + A L LE L LN N + + S F P
Sbjct: 146 QAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L+T L N CDCHL WL + C+ P L+ + +V+ EF+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 224 (83.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ V DA L L L+L N+++ L++ F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 430
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRC 487
Score = 211 (79.3 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 48/159 (30%), Positives = 82/159 (51%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK LT L +++LS+N+++ + F G + L+L N + +R+G F L L+T+ L
Sbjct: 561 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 620
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
++ +I +H D+ L + L+L N++ +S F L TL+L NP+ C+C L
Sbjct: 621 RNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLA 680
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+WL + K+ + C P L+ DV +F C
Sbjct: 681 WLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 719
Score = 185 (70.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 55/192 (28%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ +L + C T +P + L LNNN+IS L FK L +
Sbjct: 513 CPHKCRCEASLAE----CSSLKLTKIPERIPQSTAELRLNNNEISILEATGIFKK--LTH 566
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ F+ + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 567 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L AL +LNL N + +
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWL 686
Query: 203 LKTLSLDGNPWC 214
+ + GNP C
Sbjct: 687 RRRKIVTGNPRC 698
Score = 157 (60.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 846 TLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCVGPPDMEGKL 903
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP + ++
Sbjct: 904 LLTTPAKKFECQGPPTLAVQ 923
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 58/191 (30%), Positives = 85/191 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ TA+P+ L + + L N I + AF L
Sbjct: 282 CPAMCSCSNGIVD----CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--KL 335
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F+ L L + L N+I L + F G L++L LN N I
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+R F L L + L +I S+ K L A+++L HL+++ F NL
Sbjct: 396 VRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL--------HLAQNPFICDCNL 447
Query: 204 KTLS--LDGNP 212
K L+ L NP
Sbjct: 448 KWLADFLRTNP 458
Score = 122 (48.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N I+ L A G F KL +LK I L + ++ + A ++ L+L N+L+ +
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 193 SESVFFPTPNLKTLSLDGNPWCCDCHLRSF---RNWLLKSKLYSHPLSCTEPGMLQT 246
+F L+TL L N C H SF RN L S LY + ++ PG T
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLS-LYDNQIATISPGAFDT 659
Score = 69 (29.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 383 LQLLLLNANKINCVRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 432
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 433 TLHLAQNPFICDCNLKWLADFLRTNPI 459
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 259 (96.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 79/273 (28%), Positives = 125/273 (45%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + IRE+ F+ L L + L++NQI + F + LK LYL N I +
Sbjct: 69 LRFNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQ 128
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L QI ++ D+ HL LE L L+ NR+ HL F ++K L
Sbjct: 129 AFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLR 188
Query: 208 LDGNPWCCDCHLRSFRNWLLKSKLYSHPLS----CTEPGMLQTKHWDDVKAQEFACP-PN 262
LD N CDC + + LLK+ S C P +Q + + +E C P
Sbjct: 189 LDSNTLHCDCEILWLAD-LLKTYAESGNAQAAAICEYPRRIQGRSVATITPEELNCERPR 247
Query: 263 VTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV 322
+T + +G V +C G+P+P I+WL N N+ + + + L + ++
Sbjct: 248 ITSEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRN-----NNELSMKTDSRLNLLDDGTL 302
Query: 323 SITLFNVTDLDAGEYTCYAENIRGNA-SGEISL 354
I N + D G Y C A+N+ G + E++L
Sbjct: 303 MIQ--NTQETDQGIYQCMAKNVAGEVKTQEVTL 333
Score = 163 (62.4 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C A+P+ +LDL N+I + AF+ L NL
Sbjct: 36 CPSRCLCFRT----TVRCMHLLLEAVPAVAPQT-SILDLRFNRIREIQPGAFRR--LRNL 88
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L N+ I+ + F+ L L + L N+I + + F G L+ LYL+ N I
Sbjct: 89 NTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIET 148
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F LP L+ + L + +I + HL +++ L L+ N L H + + L
Sbjct: 149 LDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNTL-HCDCEILWLADLL 207
Query: 204 KTLSLDGN 211
KT + GN
Sbjct: 208 KTYAESGN 215
Score = 116 (45.9 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 273 EAGGNVTMSCYVYGDPEPTILWLLNG-QVLHNSSFDLLEEEEGDALFEKSVSITLFNVTD 331
E G NV + C G+PEP I W +G QV + F + EG F +T+ +V
Sbjct: 537 EVGANVQLPCSSQGEPEPAITWNKDGVQVTESGKFHI--SPEG---F-----LTINDVGP 586
Query: 332 LDAGEYTCYAENIRGNASGE--ISLDLPEIN 360
DAG Y C A N G+AS +S+++P+++
Sbjct: 587 ADAGRYECVARNTIGSASVSMVLSVNVPDVS 617
Score = 78 (32.5 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 34/107 (31%), Positives = 44/107 (41%)
Query: 246 TKHWDDVKAQEF----ACPP-NVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQV 300
T + D V A F A P VT ++ +VI G V C G+P P I W G
Sbjct: 415 TNNIDSVHATAFIIVQALPQFTVTPQDRVVIE--GQTVDFQCEAKGNPPPVIAWTKGGSQ 472
Query: 301 LHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
L S D L S ++ + V D G+Y C A NI G+
Sbjct: 473 L---SVDRRH------LVLSSGTLRISGVALHDQGQYECQAVNIIGS 510
Score = 64 (27.6 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 28/100 (28%), Positives = 38/100 (38%)
Query: 251 DVKAQE-----FACP--PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHN 303
+VK QE F P P I+ G +VT+ C G P P I W +
Sbjct: 325 EVKTQEVTLRYFGSPARPTFVIQPQNTEVLVGESVTLECSATGHPPPRISWTRGDRT--- 381
Query: 304 SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
L + + S + + NV D+GEY C A N
Sbjct: 382 ---PLPVDPRVN--ITPSGGLYIQNVVQGDSGEYACSATN 416
Score = 39 (18.8 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 395 VCRAHEHXXXXXXXXXXXXQSVSFNDQEKKLLDVSITTTDRHT 437
V R EH + ND + +L++ T TD T
Sbjct: 1359 VGRQGEHLSNSTSAFSTRSDASGTNDFREFVLEMQKTITDLRT 1401
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 248 (92.4 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 70/244 (28%), Positives = 108/244 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C ++P + + + LDLN N I+ +TK F GL +L
Sbjct: 28 CPAQCSCSGS----TVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFA--GLRHL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F+ L L + L+ N + + FLG +L L L+ N I
Sbjct: 82 RVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQA 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + I + A L LE L LN N + LS + F P L
Sbjct: 142 IPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 201
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNV 263
+T L N CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 202 RTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGGT 261
Query: 264 TIKE 267
+ KE
Sbjct: 262 SGKE 265
Score = 227 (85.0 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 363
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F P
Sbjct: 364 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 423
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 424 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 480
Score = 191 (72.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 46/159 (28%), Positives = 81/159 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++ S+N+I + + F G + + L N + ++ F L LKT+ L
Sbjct: 556 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 615
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ +I V D+ I L+++ L+L N++ ++ F +L TL+L NP+ C+C+L
Sbjct: 616 RSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLA 675
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ + C +P L+ DV Q+F C
Sbjct: 676 WLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 714
Score = 151 (58.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/192 (26%), Positives = 84/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + T +P + L LNNN+ + L FK L
Sbjct: 508 CPEKCRCEGT----TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 561
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I N+ I ++ F+ + + E+ L+ N++ + F G + LK L L N I+
Sbjct: 562 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 621
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L +L +LNL N +
Sbjct: 622 CVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWL 681
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 682 RKKRIVTGNPRC 693
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/164 (26%), Positives = 78/164 (47%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
+ E+ L NQ + ++ L N + L ++ L+ N I+ L F + L T+ L + ++
Sbjct: 758 VTELYLDGNQFTLVPKE--LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 815
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
+ L +L L+L+GN + + E F L L++ NP CDC+++ +W
Sbjct: 816 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGANPLYCDCNMQWLSDW 875
Query: 226 LLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVTI 265
+ KS+ Y P C PG + K +++F C P +V I
Sbjct: 876 V-KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVNI 917
Score = 116 (45.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N T L A G F KLP L+ I + +I + + A + + + L NRL+++
Sbjct: 540 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 599
Query: 193 SESVFFPTPNLKTLSLDGNPWCC---DCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKH 248
+F +LKTL L N C D + LL LY + ++ PG T H
Sbjct: 600 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLS--LYDNQITTIAPGAFDTLH 656
Score = 84 (34.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP +L +Q+L LN NKI+ L +AF+ + LNL +Y ++ ++ + + TF
Sbjct: 363 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY--DNKLQTIAKGTFSP 420
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVL--YLNGNPI 141
L + Q L Q+ F+ + LK L YL+ NPI
Sbjct: 421 LRAI--------QTMHLAQNPFICDCHLKWLADYLHTNPI 452
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 243 (90.6 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 69/236 (29%), Positives = 104/236 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C +P + + + LDLN N I+ +TK F GL +L
Sbjct: 28 CPAQCSCSGS----TVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTDFA--GLRHL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F L L + L+ N + + FLG +L L L+ N I
Sbjct: 82 RILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQA 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + QI + A L LE L LN N + LS + F P L
Sbjct: 142 IPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 201
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 202 RTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 219 (82.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 57/177 (32%), Positives = 89/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + IR + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 365
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F
Sbjct: 366 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 425
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 426 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 482
Score = 197 (74.4 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 63/236 (26%), Positives = 109/236 (46%)
Query: 29 RCKWTLGKKSALCKDANFT--ALPSTLDSDIQVLDLNNNKISYLTK---EAFKSIGLLNL 83
RC T +S L D F A P + +D +N K++ + + + L N
Sbjct: 481 RCSGTEDYRSKLSGDC-FADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNN 539
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L+ +GI FK L L +++LS+N+I + + F G + + L N +
Sbjct: 540 EFTVLEATGI-------FKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLEN 592
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
++ F L LKT+ L+ +I V D+ L ++ L+L N++ ++ F +L
Sbjct: 593 VQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSL 652
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
TL+L NP+ C+CHL WL + ++ + C +P L+ DV Q+F C
Sbjct: 653 STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 708
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 47/165 (28%), Positives = 77/165 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + +P + L LNNN+ + L FK L
Sbjct: 502 CPEKCRCEGT----TVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 555
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I ++ F+ + + E+ L+ N++ + F G + LK L L N I+
Sbjct: 556 LRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 615
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ F L ++ + L QI +V A L +L +LNL N
Sbjct: 616 CVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 660
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 247 (92.0 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 69/236 (29%), Positives = 106/236 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C ++P + + + LDLN N I+ +TK F GL +L
Sbjct: 28 CPAQCSCSGS----TVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFA--GLRHL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F+ L L + L+ N + + FLG +L L L+ N I
Sbjct: 82 RVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQIQA 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + QI + A L LE L LN N + LS + F P L
Sbjct: 142 IPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 201
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 202 RTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 225 (84.3 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F P
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 421
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 422 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 478
Score = 190 (71.9 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 56/215 (26%), Positives = 103/215 (47%)
Query: 48 ALPSTLDSDIQVLDLNNNKISYLTK---EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
A P + +D +N K++ + + + + L N + L+ +GI FK L
Sbjct: 505 ACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGI-------FKKL 557
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
L +++ S+N+I + + F G + + L N + ++ F L LKT+ L+ +
Sbjct: 558 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 617
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRN 224
I V D+ I L+++ L+L N++ ++ F +L TL+L NP+ C+C+L
Sbjct: 618 ITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGE 677
Query: 225 WLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ + C +P L+ DV Q+F C
Sbjct: 678 WLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 712
Score = 151 (58.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/192 (27%), Positives = 83/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + +P + L LNNN+ + L FK L
Sbjct: 506 CPEKCRCEGT----TVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 559
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I N+ I ++ F+ + + E+ L+ N++ + F G + LK L L N IT
Sbjct: 560 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT 619
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI +V A L +L +LNL N +
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWL 679
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 680 RKKRIVTGNPRC 691
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/164 (26%), Positives = 78/164 (47%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
+ E+ L NQ + ++ L N + L ++ L+ N I+ L F + L T+ L + ++
Sbjct: 756 VTELYLDGNQFTLVPKE--LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 813
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
+ L +L L+L+GN + + E F L L++ NP CDC+++ +W
Sbjct: 814 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 873
Query: 226 LLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVTI 265
+ KS+ Y P C PG + K +++F C P +V I
Sbjct: 874 V-KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVNI 915
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 38/139 (27%), Positives = 67/139 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA--FKSIGLL 81
CP C C T+ + C + LP + D+ L L+ N+ + + KE +K + L+
Sbjct: 727 CPTECTCLDTVVR----CSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLI 782
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + +F +T L+ + LS N++ + TF G L++L L+GN I
Sbjct: 783 DLS-----NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 837
Query: 142 TELRAGQFPKLPYLKTIEL 160
+ + G F L L + +
Sbjct: 838 SVVPEGAFNDLSALSHLAI 856
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 246 (91.7 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 70/236 (29%), Positives = 102/236 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C A+P + + + L+LN N I+ + K F GL L
Sbjct: 34 CPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLKQL 87
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N I
Sbjct: 88 RVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQA 147
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F LK ++L QI + + A L LE L LN N + + S F P L
Sbjct: 148 IPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKL 207
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL WL + C+ P L+ + +V+ EF+C
Sbjct: 208 RTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 223 (83.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 430
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRC 487
Score = 215 (80.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 49/159 (30%), Positives = 82/159 (51%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK LT L +++LS+N+++ + F G + L+L N + +R+G F L L+T+ L
Sbjct: 561 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 620
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
++ +I +H D+ L + L+L N++ +S F +L TL+L NP+ C+C L
Sbjct: 621 RNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLA 680
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K K+ + C P L+ DV +F C
Sbjct: 681 WLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 719
Score = 178 (67.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/192 (28%), Positives = 85/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ + + C T +P + L LNNN+IS L FK L +
Sbjct: 513 CPHKCRCEANVVE----CSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK--LTH 566
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ F+ + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 567 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI +V A L +L +LNL N + +
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWL 686
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 687 RKRKIVTGNPRC 698
Score = 158 (60.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCAGPQDMEGKL 903
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP + ++
Sbjct: 904 LLTTPAKKFECQGPPTLAVQ 923
Score = 156 (60.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/191 (30%), Positives = 85/191 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ TA+P+ L + + L N I + AF L
Sbjct: 282 CPAMCTCSNGIVD----CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--KL 335
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F+ L L + L N+I L + F G L++L LN N I
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+R F L L + L +I S+ K L A+++L HL+++ F NL
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL--------HLAQNPFICDCNL 447
Query: 204 KTLS--LDGNP 212
K L+ L NP
Sbjct: 448 KWLADFLRTNP 458
Score = 126 (49.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N I+ L A G F KL +LK I L + ++ + A ++ L+L N+L+ +
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 193 SESVFFPTPNLKTLSLDGNPWCCDCHLRSF---RNWLLKSKLYSHPLSCTEPGMLQT 246
+F L+TL L N C H SF RN L S LY + ++ PG T
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLS-LYDNQITTVSPGAFDT 659
Score = 70 (29.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 432
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 433 TLHLAQNPFICDCNLKWLADFLRTNPI 459
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 246 (91.7 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 70/236 (29%), Positives = 102/236 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C A+P + + + L+LN N I+ + K F GL L
Sbjct: 34 CPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLKQL 87
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N I
Sbjct: 88 RVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQA 147
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F LK ++L QI + + A L LE L LN N + + S F P L
Sbjct: 148 IPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKL 207
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL WL + C+ P L+ + +V+ EF+C
Sbjct: 208 RTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 223 (83.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 430
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRC 487
Score = 215 (80.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 49/159 (30%), Positives = 82/159 (51%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK LT L +++LS+N+++ + F G + L+L N + +R+G F L L+T+ L
Sbjct: 561 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 620
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
++ +I +H D+ L + L+L N++ +S F +L TL+L NP+ C+C L
Sbjct: 621 RNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLA 680
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K K+ + C P L+ DV +F C
Sbjct: 681 WLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 719
Score = 178 (67.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/192 (28%), Positives = 85/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ + + C T +P + L LNNN+IS L FK L +
Sbjct: 513 CPHKCRCEANVVE----CSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK--LTH 566
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ F+ + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 567 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI +V A L +L +LNL N + +
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWL 686
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 687 RKRKIVTGNPRC 698
Score = 158 (60.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCAGPQDMEGKL 903
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP + ++
Sbjct: 904 LLTTPAKKFECQGPPTLAVQ 923
Score = 156 (60.0 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 58/191 (30%), Positives = 85/191 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ TA+P+ L + + L N I + AF L
Sbjct: 282 CPAMCTCSNGIVD----CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--KL 335
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F+ L L + L N+I L + F G L++L LN N I
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+R F L L + L +I S+ K L A+++L HL+++ F NL
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL--------HLAQNPFICDCNL 447
Query: 204 KTLS--LDGNP 212
K L+ L NP
Sbjct: 448 KWLADFLRTNP 458
Score = 126 (49.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N I+ L A G F KL +LK I L + ++ + A ++ L+L N+L+ +
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 193 SESVFFPTPNLKTLSLDGNPWCCDCHLRSF---RNWLLKSKLYSHPLSCTEPGMLQT 246
+F L+TL L N C H SF RN L S LY + ++ PG T
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLS-LYDNQITTVSPGAFDT 659
Score = 70 (29.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 432
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 433 TLHLAQNPFICDCNLKWLADFLRTNPI 459
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 244 (91.0 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 81/324 (25%), Positives = 145/324 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L+ N I+ ++ +A++ L + L + + + +F L++L + + +N+
Sbjct: 289 LQELHLSQNAINRISPDAWEFCQ--KLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNR 346
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
++++ F G LK L L N I+ E G F L L+ + LQ +I S+ K A
Sbjct: 347 VSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAF 406
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L ALE L+L+ N + L + F L+ L L+ + CDC L+ W+ ++ S
Sbjct: 407 TGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQLKWLPQWVAENNFQS 466
Query: 234 HP-LSCTEPGMLQTKHWDDVKAQEFAC---P-PNVTIKESMVIREAGGNVTMSCYVYG-- 286
SC P +L+ + V F C P P +T++ G N++ C
Sbjct: 467 FVNASCAHPQLLKGRSIFAVSPDGFVCDDFPKPQITVQPETQSAIKGSNLSFICSAASSS 526
Query: 287 DPEPTILWLLNGQVLHNSSFDLLEE--EEGDALFEKSVSITLFNVTDLDAGEYTCYAENI 344
D T W + ++LH++ + +G + E + + L V G+Y C N
Sbjct: 527 DSPMTFAWKKDNELLHDAEMENYAHLRAQGGEVMEYTTILRLREVEFASEGKYQCVISNH 586
Query: 345 RGNASGEISLDLPEINLATTLSKT 368
G+ S + L +N+ + +KT
Sbjct: 587 FGS-SYSVKAKLT-VNMLPSFTKT 608
Score = 178 (67.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 47/160 (29%), Positives = 85/160 (53%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S++++L L++N ++ +TK GLL LQ ++L + I + D +++ L E+DL+
Sbjct: 263 SNMEILQLDHNNLTEITKGWL--YGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTF 320
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD--- 171
N ++ L +FLG L L++ N ++ + F L LKT++L++ +I +D
Sbjct: 321 NHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNG 380
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
A L L L L GNR++ +++ F L+ L L N
Sbjct: 381 AFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDN 420
Score = 164 (62.8 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 56/190 (29%), Positives = 87/190 (45%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
L + + VL LN N+IS + + FK L LQ + L + I+ V TF+ L L + +
Sbjct: 190 LANTLLVLKLNRNRISAIPPKMFK---LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKM 246
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
N + L F G +++L L+ N +TE+ G L L+ + L I+ + DA
Sbjct: 247 QRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDA 306
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN--PWCCDCHLRSFRNWLLKS- 229
L L+L N L L +S F L TL + N + DC R + LK+
Sbjct: 307 WEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSS--LKTL 364
Query: 230 KLYSHPLSCT 239
L ++ +S T
Sbjct: 365 DLKNNEISWT 374
Score = 139 (54.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 54/191 (28%), Positives = 88/191 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP TCRC LG C LP L S + LDL++N++S++ + L +L
Sbjct: 47 CPTTCRC---LGDLLD-CSRKRLARLPEPLPSWVARLDLSHNRLSFIKASSMSH--LQSL 100
Query: 84 QRIYLKNSGIREVHR--DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+ + L N+ + + +T+L L+ N+I + + L+ L L+ N I
Sbjct: 101 REVKLNNNELETIPNLGPVSANITLL---SLAGNRIVEILPEHLKEFQSLETLDLSSNNI 157
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLT-ALESLNLNGNRLKHLSESVFFPT 200
+EL+ FP L LK + L ++ S+ +L L L LN NR+ + +F
Sbjct: 158 SELQTA-FPALQ-LKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMF-KL 214
Query: 201 PNLKTLSLDGN 211
P L+ L L+ N
Sbjct: 215 PQLQHLELNRN 225
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 49/164 (29%), Positives = 80/164 (48%)
Query: 51 STLDSDIQVLDLNNNKISYLTKEAFKSIGLL--NLQRIYLKNSGIREVHRDTFKYLTILV 108
S L S ++ + LNNN++ E ++G + N+ + L + I E+ + K L
Sbjct: 95 SHLQS-LREVKLNNNEL-----ETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLE 148
Query: 109 EVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY-LKTIELQHCQIHS 167
+DLS N I+ L Q F +LK LYLN N +T + G F L L ++L +I +
Sbjct: 149 TLDLSSNNISEL-QTAFPAL-QLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISA 206
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ + L L+ L LN N++K++ F LK+L + N
Sbjct: 207 I-PPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRN 249
Score = 84 (34.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 269 MVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+ IR AG + C G P P I W +G + F E + E V + +
Sbjct: 612 LTIR-AGAMARLECAAVGHPAPQIAWQKDG----GTDFPAARERRMHVMPEDDVFF-IVD 665
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPE 358
V D G Y+C A+N G+ S +L + E
Sbjct: 666 VKIEDIGVYSCTAQNSAGSISANATLTVLE 695
Score = 65 (27.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + C G P P + W + L ++ E A + + I +V+D A
Sbjct: 711 GETAVLQCIAGGSPPPKLNWTKDDSPL------VVTERHFFAAGNQLLIIVDSDVSD--A 762
Query: 335 GEYTCYAENIRGNASGEISLDL 356
G+YTC N G G + L +
Sbjct: 763 GKYTCEMSNTLGTERGNVRLSV 784
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 251 (93.4 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 68/242 (28%), Positives = 111/242 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C S C A+P + + + LDL+ N I+ +TK F
Sbjct: 29 PPAVACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFA-- 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL NL+ ++L+++ + + R F+ L L + L+ N++ L + F +L L L+
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N I + F + +K ++L + I + A L LE L LN N + + + F
Sbjct: 143 NQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
P ++TL L N CDCHL +WL + + C P L+ + DV+ +E+
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV 262
Query: 259 CP 260
CP
Sbjct: 263 CP 264
Score = 228 (85.3 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 54/174 (31%), Positives = 90/174 (51%)
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
I L+ + I+ + F L +D+S NQI+ + D F G L L L GN ITE+
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIV 371
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKT 205
G F L L+ + L +I+ + + L L L+L N+L+ +S+ +F P +++T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 206 LSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L L NP+ CDCHL+ ++L + + + C+ P L K +K+++F C
Sbjct: 432 LHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 485
Score = 203 (76.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 553 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLML 612
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V D L+++ L+L NR+ ++ F +L T++L NP+ C+CHL
Sbjct: 613 RSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLA 672
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 673 WLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Score = 180 (68.4 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 56/192 (29%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + +PS L + L LN+N++S L FK L N
Sbjct: 505 CPEKCRCEGTIVD----CSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKK--LPN 558
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N I
Sbjct: 559 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIG 618
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWL 678
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 679 RKRRIVSGNPRC 690
Score = 144 (55.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 54/217 (24%), Positives = 98/217 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++VL L +N++S + + AF+ L L+R+ L + ++ + F+ L +DLS+N
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQD--LKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
QI + + F G +K L L+ N I+ + G F L L+ + L + I + + H
Sbjct: 144 QIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCC--DCHLRSFRNWLLKSKLYS 233
+ + +L L+ N L + + + + L+ G C HLR F ++ K Y
Sbjct: 204 MPKIRTLRLHSNHL-YCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV 262
Query: 234 HPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
P +EP A +CP T ++V
Sbjct: 263 CPAPHSEP--------PSCNANSISCPSPCTCSNNIV 291
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ +P+ L I + L N I + AF L
Sbjct: 280 CPSPCTCSNNIVD----CRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYK--KL 333
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI + + I ++ D F+ L L + L N+I + + F G L++L LN N I
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINC 393
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
LR F L L + L ++ ++ K L ++++L+L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 46/178 (25%), Positives = 75/178 (42%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQF 149
N G+R + R K +T E+ L N + + ++ L ++ L+ N I+ L F
Sbjct: 740 NKGLRALPRGMPKDVT---ELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTF 795
Query: 150 PKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+ +L T+ L + ++ + A L +L L L+GN + + E F +L L+L
Sbjct: 796 SNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALG 855
Query: 210 GNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFACPPNVTI 265
NP CDC LR W+ Y P C+ P + + F C V I
Sbjct: 856 TNPLHCDCSLRWLSEWVKAG--YKEPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDI 911
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C T+ + C + ALP + D+ L L N ++ + +E L +L
Sbjct: 725 CPEQCTCMETVVR----CSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELS---ALRHL 777
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + TF ++ L + LS N++ + F G L+VL L+GN I+
Sbjct: 778 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 144 LRAGQFPKLPYLKTIELQHCQIH 166
+ G F L L + L +H
Sbjct: 838 VPEGSFNDLTSLSHLALGTNPLH 860
Score = 44 (20.5 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 327 FNVTDLDAGEYTCYAENIRGNASGEISLDLP 357
FNV D+ EY C A + + S+ P
Sbjct: 251 FNVADVQKKEYVCPAPHSEPPSCNANSISCP 281
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 251 (93.4 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 68/242 (28%), Positives = 111/242 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C S C A+P + + + LDL+ N I+ +TK F
Sbjct: 29 PPAVACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFA-- 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL NL+ ++L+++ + + R F+ L L + L+ N++ L + F +L L L+
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N I + F + +K ++L + I + A L LE L LN N + + + F
Sbjct: 143 NQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
P ++TL L N CDCHL +WL + + C P L+ + DV+ +E+
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV 262
Query: 259 CP 260
CP
Sbjct: 263 CP 264
Score = 228 (85.3 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 54/174 (31%), Positives = 90/174 (51%)
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
I L+ + I+ + F L +D+S NQI+ + D F G L L L GN ITE+
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIV 371
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKT 205
G F L L+ + L +I+ + + L L L+L N+L+ +S+ +F P +++T
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 206 LSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L L NP+ CDCHL+ ++L + + + C+ P L K +K+++F C
Sbjct: 432 LHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 485
Score = 203 (76.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 553 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLML 612
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V D L+++ L+L NR+ ++ F +L T++L NP+ C+CHL
Sbjct: 613 RSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLA 672
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 673 WLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Score = 180 (68.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 56/192 (29%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + +PS L + L LN+N++S L FK L N
Sbjct: 505 CPEKCRCEGTIVD----CSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKK--LPN 558
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N I
Sbjct: 559 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIG 618
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWL 678
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 679 RKRRIVSGNPRC 690
Score = 144 (55.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 54/217 (24%), Positives = 98/217 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++VL L +N++S + + AF+ L L+R+ L + ++ + F+ L +DLS+N
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQD--LKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSEN 143
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
QI + + F G +K L L+ N I+ + G F L L+ + L + I + + H
Sbjct: 144 QIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNH 203
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCC--DCHLRSFRNWLLKSKLYS 233
+ + +L L+ N L + + + + L+ G C HLR F ++ K Y
Sbjct: 204 MPKIRTLRLHSNHL-YCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV 262
Query: 234 HPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
P +EP A +CP T ++V
Sbjct: 263 CPAPHSEP--------PSCNANSISCPSPCTCSNNIV 291
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ +P+ L I + L N I + AF L
Sbjct: 280 CPSPCTCSNNIVD----CRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYK--KL 333
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI + + I ++ D F+ L L + L N+I + + F G L++L LN N I
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINC 393
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
LR F L L + L ++ ++ K L ++++L+L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 134 (52.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 51/185 (27%), Positives = 79/185 (42%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQF 149
N G+R + R K +T E+ L N + + ++ L ++ L+ N I+ L F
Sbjct: 740 NKGLRALPRGMPKDVT---ELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTF 795
Query: 150 PKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+ +L T+ L + ++ + A L +L L L+GN + + E F +L L+L
Sbjct: 796 SNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALG 855
Query: 210 GNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPG------MLQTK-HWDDVKAQEFACP 260
NP CDC LR W+ Y P C+ P +L T H K F CP
Sbjct: 856 TNPLHCDCSLRWLSEWVKAG--YKEPGIARCSSPEPMADRLLLTTPTHRFQCKVLWFCCP 913
Query: 261 PNVTI 265
V I
Sbjct: 914 GPVDI 918
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C T+ + C + ALP + D+ L L N ++ + +E L +L
Sbjct: 725 CPEQCTCMETVVR----CSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELS---ALRHL 777
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + TF ++ L + LS N++ + F G L+VL L+GN I+
Sbjct: 778 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 144 LRAGQFPKLPYLKTIELQHCQIH 166
+ G F L L + L +H
Sbjct: 838 VPEGSFNDLTSLSHLALGTNPLH 860
Score = 44 (20.5 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 327 FNVTDLDAGEYTCYAENIRGNASGEISLDLP 357
FNV D+ EY C A + + S+ P
Sbjct: 251 FNVADVQKKEYVCPAPHSEPPSCNANSISCP 281
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 245 (91.3 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 69/236 (29%), Positives = 106/236 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C ++P + + + LDLN N I+ +TK F GL +L
Sbjct: 28 CPAQCSCSGS----TVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFA--GLRHL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + R F+ L L + L+ N + + FLG +L L L+ N I
Sbjct: 82 RVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQA 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L + QI + A L LE L LN N + LS + F P L
Sbjct: 142 IPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKL 201
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 202 RTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 219 (82.2 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 57/177 (32%), Positives = 89/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + IR + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 421
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 422 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 478
Score = 198 (74.8 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 65/236 (27%), Positives = 108/236 (45%)
Query: 29 RCKWTLGKKSALCKDANFT--ALPSTLDSDIQVLDLNN---NKISYLTKEAFKSIGLLNL 83
RC T +S L D F A P + +D +N NKI + + L N
Sbjct: 477 RCSGTEDYRSKLSGDC-FADLACPEKCRCEGTTVDCSNQRLNKIPDHIPQYTAELRLNNN 535
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L+ +GI FK L L +++ S+N+I + + F G + + L N +
Sbjct: 536 EFTVLEATGI-------FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 588
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
++ F L LKT+ L+ +I V D+ I L ++ L+L N++ ++ F +L
Sbjct: 589 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSL 648
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
TL+L NP+ C+CHL WL + ++ + C +P L+ DV Q+F C
Sbjct: 649 STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 704
Score = 147 (56.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQ 148
N G++ + + K +T E+ L NQ + ++ L N + L ++ L+ N I+ L
Sbjct: 734 NKGLKVLPKGIPKDVT---ELYLDGNQFTLVPKE--LSNYKHLTLIDLSNNRISTLSNQS 788
Query: 149 FPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
F + L T+ L + ++ + L +L L+L+GN + + E F L L++
Sbjct: 789 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 848
Query: 209 DGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVT 264
NP CDC+++ +W+ KS+ Y P C PG + K +++F C P ++T
Sbjct: 849 GANPLYCDCNMQWLSDWV-KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDIT 906
Query: 265 IK 266
I+
Sbjct: 907 IQ 908
Score = 146 (56.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + +P + L LNNN+ + L FK L
Sbjct: 498 CPEKCRCEGT----TVDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 551
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I N+ I ++ F+ + + E+ L+ N++ + F G + LK L L N I+
Sbjct: 552 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 611
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ F L ++ + L QI +V A L +L +LNL N
Sbjct: 612 CVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLAN 656
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 38/139 (27%), Positives = 67/139 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA--FKSIGLL 81
CP C C T+ + C + LP + D+ L L+ N+ + + KE +K + L+
Sbjct: 719 CPSECTCLDTVVR----CSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLI 774
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + +F +T L+ + LS N++ + TF G L++L L+GN I
Sbjct: 775 DLS-----NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 829
Query: 142 TELRAGQFPKLPYLKTIEL 160
+ + G F L L + +
Sbjct: 830 SVVPEGAFNDLSALSHLAI 848
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 245 (91.3 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 70/238 (29%), Positives = 103/238 (43%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP C C T + C A+P + + + L+LN N I+ + K F GL
Sbjct: 32 TACPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLK 85
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
L+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F LK ++L QI + + A L LE L LN N + + S F P
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L+T L N CDCHL WL + C+ P L+ + +V+ EF+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 222 (83.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 430
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Score = 216 (81.1 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 59/212 (27%), Positives = 100/212 (47%)
Query: 48 ALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTIL 107
A P + V++ + K+S + + +S L L I E FK L+ L
Sbjct: 512 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNN---NEISILEA-TGLFKKLSHL 567
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
+++LS+N+++ + TF G + L+L N + +R+G F L L+T+ L++ +I
Sbjct: 568 KKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISC 627
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
+H D+ L + L+L N + +S F L TL+L NP+ C+C L +WL
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLR 687
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
K K+ + C P L+ DV +F C
Sbjct: 688 KRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 719
Score = 180 (68.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ ++ + C + +P + L LNNN+IS L FK + +
Sbjct: 513 CPHKCRCEASVVE----CSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS--H 566
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ TF+ T + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRIS 626
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L I ++ A L AL +LNL N + +
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWL 686
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 687 RKRKIVTGNPRC 698
Score = 159 (61.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 845
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCAGPPEMEGKL 903
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP++ ++
Sbjct: 904 LLTTPAKKFECQGPPSLAVQ 923
Score = 99 (39.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LYL+GN T L GQ YL+ ++L + +I S+ + +++ L +L L+ N L+ +
Sbjct: 766 LYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 824
Query: 194 ESVFFPTPNLKTLSLDGN 211
F +L+ LSL GN
Sbjct: 825 PLAFQGLRSLRLLSLHGN 842
Score = 84 (34.6 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L NKI+ L + F GL LQ + L + I + D F+ L L + L DN+I
Sbjct: 362 LVLYGNKITDLPRGVFG--GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS 419
Query: 120 LHQDTFLGNDRLKVLYLNGNP 140
L + TF ++ L+L NP
Sbjct: 420 LAKGTFTSLRAIQTLHLAQNP 440
Score = 70 (29.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 432
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 433 TLHLAQNPFICDCNLKWLADFLRTNPI 459
Score = 43 (20.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYL 88
++ +L L +NKI L K F S L +Q ++L
Sbjct: 406 NLSLLSLYDNKIQSLAKGTFTS--LRAIQTLHL 436
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 245 (91.3 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 70/238 (29%), Positives = 103/238 (43%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP C C T + C A+P + + + L+LN N I+ + K F GL
Sbjct: 32 TACPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLK 85
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
L+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSL 145
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F LK ++L QI + + A L LE L LN N + + S F P
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L+T L N CDCHL WL + C+ P L+ + +V+ EF+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSC 263
Score = 222 (83.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 430
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Score = 216 (81.1 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 59/212 (27%), Positives = 100/212 (47%)
Query: 48 ALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTIL 107
A P + V++ + K+S + + +S L L I E FK L+ L
Sbjct: 512 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNN---NEISILEA-TGLFKKLSHL 567
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
+++LS+N+++ + TF G + L+L N + +R+G F L L+T+ L++ +I
Sbjct: 568 KKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISC 627
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
+H D+ L + L+L N + +S F L TL+L NP+ C+C L +WL
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLR 687
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
K K+ + C P L+ DV +F C
Sbjct: 688 KRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 719
Score = 180 (68.4 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ ++ + C + +P + L LNNN+IS L FK + +
Sbjct: 513 CPHKCRCEASVVE----CSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS--H 566
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ TF+ T + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRIS 626
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L I ++ A L AL +LNL N + +
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWL 686
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 687 RKRKIVTGNPRC 698
Score = 159 (61.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 845
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCAGPPEMEGKL 903
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP++ ++
Sbjct: 904 LLTTPAKKFECQGPPSLAVQ 923
Score = 99 (39.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LYL+GN T L GQ YL+ ++L + +I S+ + +++ L +L L+ N L+ +
Sbjct: 766 LYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 824
Query: 194 ESVFFPTPNLKTLSLDGN 211
F +L+ LSL GN
Sbjct: 825 PLAFQGLRSLRLLSLHGN 842
Score = 84 (34.6 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L NKI+ L + F GL LQ + L + I + D F+ L L + L DN+I
Sbjct: 362 LVLYGNKITDLPRGVFG--GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS 419
Query: 120 LHQDTFLGNDRLKVLYLNGNP 140
L + TF ++ L+L NP
Sbjct: 420 LAKGTFTSLRAIQTLHLAQNP 440
Score = 70 (29.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 432
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 433 TLHLAQNPFICDCNLKWLADFLRTNPI 459
Score = 43 (20.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYL 88
++ +L L +NKI L K F S L +Q ++L
Sbjct: 406 NLSLLSLYDNKIQSLAKGTFTS--LRAIQTLHL 436
>UNIPROTKB|Q9ULH4 [details] [associations]
symbol:LRFN2 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HOGENOM:HOG000237343 HOVERGEN:HBG052352 EMBL:AB033072 EMBL:AK291474
EMBL:AL591063 EMBL:BC142616 IPI:IPI00008107 RefSeq:NP_065788.1
UniGene:Hs.250015 ProteinModelPortal:Q9ULH4 SMR:Q9ULH4
STRING:Q9ULH4 PhosphoSite:Q9ULH4 DMDM:62286951 PaxDb:Q9ULH4
PRIDE:Q9ULH4 Ensembl:ENST00000338305 GeneID:57497 KEGG:hsa:57497
UCSC:uc003oph.1 CTD:57497 GeneCards:GC06M040406 HGNC:HGNC:21226
HPA:HPA013653 MIM:612808 neXtProt:NX_Q9ULH4 PharmGKB:PA134913285
eggNOG:NOG311542 InParanoid:Q9ULH4 KO:K16355 OMA:HWVAPDD
OrthoDB:EOG469QT6 ChiTaRS:LRFN2 GenomeRNAi:57497 NextBio:63812
Bgee:Q9ULH4 CleanEx:HS_LRFN2 Genevestigator:Q9ULH4
GermOnline:ENSG00000156564 Uniprot:Q9ULH4
Length = 789
Score = 241 (89.9 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 83/326 (25%), Positives = 152/326 (46%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N IS++ + F + L +L+ ++L ++ + + DT + L L + +++NQ+
Sbjct: 81 LTLSRNTISHI--QPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGG 138
Query: 120 LHQDTFLGND---RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ + F D L+ L L+ N + L ++ L + L H + + + L
Sbjct: 139 IADEAF--EDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADL 196
Query: 177 TALESLNLNGNRLKHLSESVFFP---------TPNLKTLSLD--GNPWCCDCHLRSFRNW 225
L L+L NRL+ L F TP LS GNP C+C L W
Sbjct: 197 QKLARLDLTSNRLQKLPPDPIFARSQASALTATPFAPPLSFSFGGNPLHCNCELL----W 252
Query: 226 LLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYV 284
L + + +C PG L+ +++ V+ +EF C PP +T ++ G T+ C
Sbjct: 253 LRRLERDDDLETCGSPGGLKGRYFWHVREEEFVCEPPLITQHTHKLLVLEGQAATLKCKA 312
Query: 285 YGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
GDP P I W+ + +++ NSS A+++ ++ +F T D+G +TC A N
Sbjct: 313 IGDPSPLIHWVAPDDRLVGNSS--------RTAVYDNG-TLDIFITTSQDSGAFTCIAAN 363
Query: 344 IRGNASGEISLDLPEI-NLATTLSKT 368
G A+ + + + ++ +L+ + S+T
Sbjct: 364 AAGEATAMVEVSIVQLPHLSNSTSRT 389
Score = 158 (60.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 49/190 (25%), Positives = 85/190 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP C C+ LC +P +D L L N I +++++ F ++ GL++
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHISRQDFANMTGLVD 80
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + I + +F L L + L N++ L +DT G L+ L +N N +
Sbjct: 81 LT---LSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLG 137
Query: 143 ELRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F L L+ ++L + +H + D++ + L L+L+ N L H++E F
Sbjct: 138 GIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQ 197
Query: 202 NLKTLSLDGN 211
L L L N
Sbjct: 198 KLARLDLTSN 207
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 238 (88.8 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 68/208 (32%), Positives = 100/208 (48%)
Query: 37 KSALCKDANFTALPSTLDS--DIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGI 93
K LC NF +P L ++ + L NKI + A+ S+ GL +L+ + L+ + I
Sbjct: 158 KELLCFQNNFRRVPGALRGMENLTHVYLERNKIEAV---AYNSLLGLTSLKYLNLQENRI 214
Query: 94 REVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLP 153
+H + FK L L L+DN + L Q F G LK+L L GN +T + F L
Sbjct: 215 NVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLV 274
Query: 154 YLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPW 213
L+ + L ++ + + +LT+L +L+LN N L L SVF P + L L NPW
Sbjct: 275 ELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQPIYFIGRLYLFRNPW 334
Query: 214 CCDCHLRSFRNWLLKSKLYSHPLSCTEP 241
C C L R W+ KL + C P
Sbjct: 335 ECTCDLEWLREWMESYKLV-RDIPCASP 361
Score = 144 (55.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 54/194 (27%), Positives = 91/194 (46%)
Query: 24 CPDTCRCKWTLGKK-SALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP TC C T K S LC N LP + ++L+ N + +L++ AF + L +
Sbjct: 28 CPPTCTC--TQEKSCSVLCDHVNMMDLPKEFPCEASSINLDKNSLKFLSERAFGT--LPS 83
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLNGNPI 141
L+ + LK + I + FK L LVE+ ++ N+ I +LH TF RL L L+
Sbjct: 84 LKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLS---- 139
Query: 142 TELRAGQFPKLPYLKTIELQH--CQIHSVHK--DALIHLTALESLNLNGNRLKHLSESVF 197
+ P +L+ I L+ C ++ + AL + L + L N+++ ++ +
Sbjct: 140 -DCNLFNMPDRIFLEQITLKELLCFQNNFRRVPGALRGMENLTHVYLERNKIEAVAYNSL 198
Query: 198 FPTPNLKTLSLDGN 211
+LK L+L N
Sbjct: 199 LGLTSLKYLNLQEN 212
Score = 39 (18.8 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 354 LDLPEINLATTL 365
LD PE+N+ T+L
Sbjct: 382 LDPPELNMTTSL 393
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 238 (88.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 89/327 (27%), Positives = 148/327 (45%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N IS + F L L+ ++L ++ + + D F+ LT L + L++NQ+
Sbjct: 80 LTLSRNTISQIMPYTFAD--LKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANNQLHN 137
Query: 120 L--HQ-DTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ H D FLG L+ L L+ N + ++ +L + T+ + H I V +L
Sbjct: 138 ISPHAFDDFLGT--LEDLDLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNL 195
Query: 177 TALESLNLNGNRLKHLSESVFF------------PTPNLKTLSLDGNPWCCDCHLRSFRN 224
L L++ N+LK + F P +L LS GNP C+C L
Sbjct: 196 HKLARLDMTSNKLKKIPPDPLFLRIPVYAKSKGSPLSSL-VLSFGGNPLHCNCELL---- 250
Query: 225 WLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCY 283
WL + +C P L K++ + +EF C PP +T K G ++ C
Sbjct: 251 WLRRLTREDDLETCASPPDLTAKYFWTIPEEEFICDPPVITRKSPKTFAMEGQPTSLKCK 310
Query: 284 VYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL-DAGEYTCYA 341
GDP+P + W+ G+++ N+S L + S+ I N+T L D G +TC A
Sbjct: 311 ANGDPDPDVHWISPEGRLIANTSRTL-------SFSNGSLEI---NITSLKDTGIFTCIA 360
Query: 342 ENIRGNASGEISLDL-PEINLATTLSK 367
N G ++G + L + P +LA + ++
Sbjct: 361 SNAAGESTGTVELVVSPLPHLANSTNR 387
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 44/189 (23%), Positives = 82/189 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P+ +D L L N I+ + + F + + +L
Sbjct: 20 CPKRCMCQNLSPSLAILCAKTGLLFVPTVIDRRTVELRLTENFITAVKRRDFAN--MTSL 77
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I ++ TF L L + L N+++ + D F G L+ L L N +
Sbjct: 78 LHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANNQLHN 137
Query: 144 LRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L L+ ++L + + + D + LT + +LN++ N + H+ +F
Sbjct: 138 ISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLHK 197
Query: 203 LKTLSLDGN 211
L L + N
Sbjct: 198 LARLDMTSN 206
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 238 (88.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 69/236 (29%), Positives = 100/236 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C A+P ++ + L+LN N I+ + K F GL L
Sbjct: 41 CPPLCACSGT----TVDCHGTALRAVPKSIPRGTERLELNGNNITRIHKNDFS--GLKQL 94
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N I
Sbjct: 95 RVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQA 154
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F LK ++L QI + A L LE L LN N + + S F P L
Sbjct: 155 IPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKL 214
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDCHL WL + C P L+ + +++ EF+C
Sbjct: 215 RTFRLHSNHLFCDCHLAWLAQWLRQRPTIGLFTQCAAPAQLRGLNVAEIQKNEFSC 270
Score = 204 (76.9 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 57/183 (31%), Positives = 93/183 (50%)
Query: 83 LQRIYLKNSGIREVHRDTF---KYLTILVEV---DLSDNQIAWLHQDTFLGNDRLKVLYL 136
+ I L+ +GI+ + F K L ++ + DLS+NQI+ + D F G L L L
Sbjct: 318 MTEIRLELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVL 377
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESV 196
GN IT+L G F L L+ + L +I+ V DA L L L+L N+++ L++
Sbjct: 378 YGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGT 437
Query: 197 FFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQE 256
F ++TL L NP+ CDC+L+ ++L + + + C P L K +K+++
Sbjct: 438 FTSLRAIQTLHLAQNPFVCDCNLKWLADFLRANPIETSGARCASPRRLANKRIGQIKSKK 497
Query: 257 FAC 259
F C
Sbjct: 498 FRC 500
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/202 (26%), Positives = 93/202 (46%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
V++ +N K++ + + +S L L I E FK L L +++LS+N+++
Sbjct: 536 VVECSNLKLTKIPERIPQSTAELRLNN---NEISILEA-TGIFKKLPHLKKINLSNNKVS 591
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIE-LQHCQIHSVHKDALIHLT 177
+ G V L G+P+ RAG L+ + L++ +I +H D+ L
Sbjct: 592 EIEGIHHAGAIGTNVGPLWGHPLPASRAGAVFCWAQLQPLGMLRNNRISCIHNDSFTGLR 651
Query: 178 ALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS 237
+ L+L N++ ++ F +L TL+L NP+ C+C L +WL K K+ +
Sbjct: 652 NVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPR 711
Query: 238 CTEPGMLQTKHWDDVKAQEFAC 259
C P L+ DV +F C
Sbjct: 712 CQHPDFLRQIPLQDVAFPDFRC 733
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 59/195 (30%), Positives = 87/195 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAF---KSIG- 79
CP C C + C+ TA+P+ L + + L N I + AF K +
Sbjct: 289 CPAMCTCSNGIVD----CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYKKLRR 344
Query: 80 LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN 139
+L L L N+ I E+ D F+ L L + L N+I L + F G L++L LN N
Sbjct: 345 ILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLNAN 404
Query: 140 PITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
I +RA F L L + L +I S+ K L A+++L HL+++ F
Sbjct: 405 KINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL--------HLAQNPFVC 456
Query: 200 TPNLKTLS--LDGNP 212
NLK L+ L NP
Sbjct: 457 DCNLKWLADFLRANP 471
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 237 (88.5 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 70/238 (29%), Positives = 110/238 (46%)
Query: 45 NFTAL-PSTLDSD--IQVLDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
N T + PST ++ LDL +N+ + L+ E F +G L+ +Y G+ + +
Sbjct: 85 NITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLGRLHALHLY--RCGLSALPNNI 142
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F+ L L + L DN + +L D F+ L L+L+GN + L F L L + L
Sbjct: 143 FQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRLWSLHQNTFRGLGALDRLLL 202
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
H Q+ V + A L L +L L N L L+ P L+ L L+ NPW CDC
Sbjct: 203 HHNQLQWVDRLAFHDLRRLTTLYLFNNSLTELAGECLTQLPALEYLRLNDNPWECDCKAL 262
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA-CPPNVTIKESMVIREAGGN 277
S +WL K + + + C P L K ++ ++F C + ++ +S AG N
Sbjct: 263 SLWDWLKKFRGSTSSVGCVAPAELAGKDLKQLRKEDFPNCSGSESLHQSKTNTWAGTN 320
Score = 168 (64.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 55/192 (28%), Positives = 89/192 (46%)
Query: 21 WTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGL 80
W+ CP C C + + C+ NF ++P + + + L NNKI L + F +
Sbjct: 21 WS-CPRHCICY--MAPSTVSCQAHNFLSVPEGIPPHSERIFLQNNKIHRLLQGHFSPTTV 77
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLNGN 139
+++ ++ I + TF+ T+L E+DL DN+ + L +TF G RL L+L
Sbjct: 78 T----LWIYSNNITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLGRLHALHLYRC 133
Query: 140 PITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
++ L F L L+ + LQ + + D + L L L L+GNRL L ++ F
Sbjct: 134 GLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRLWSLHQNTFRG 193
Query: 200 TPNLKTLSLDGN 211
L L L N
Sbjct: 194 LGALDRLLLHHN 205
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 502 VSVSQEPPGSDPPK 515
VS+ QEP + PP+
Sbjct: 322 VSLKQEPHPAQPPQ 335
>RGD|1311831 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1311831 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 HOGENOM:HOG000237343 HOVERGEN:HBG052352
eggNOG:NOG311542 OrthoDB:EOG469QT6 EMBL:DQ070869 IPI:IPI00371727
UniGene:Rn.47365 ProteinModelPortal:Q460M5 IntAct:Q460M5
STRING:Q460M5 UCSC:RGD:1311831 InParanoid:Q460M5
Genevestigator:Q460M5 Uniprot:Q460M5
Length = 788
Score = 237 (88.5 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 84/324 (25%), Positives = 150/324 (46%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N IS++ + F + L +L+ ++L ++ + + DT + L L + +++NQ+
Sbjct: 81 LTLSRNTISHI--QPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGG 138
Query: 120 LHQDTFLGND---RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ D F D L+ L L+ N + L ++ L + L H + + + L
Sbjct: 139 IADDAF--EDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADL 196
Query: 177 TALESLNLNGNRLKHLSESVFFP---------TPNLKTLSLD--GNPWCCDCHLRSFRNW 225
L L+L NRL+ L F TP LS GNP C+C L W
Sbjct: 197 QKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGNPLHCNCELL----W 252
Query: 226 LLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYV 284
L + + +C PG L+ +++ ++ +EF C PP +T ++ G T+ C
Sbjct: 253 LRRLERDDDLKTCGSPGGLKGRYFWHIREEEFVCEPPLITQHTHKLLVLEGQAATLKCKA 312
Query: 285 YGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
GDP P I W+ + +++ NSS A+++ ++ + T D+G +TC A N
Sbjct: 313 IGDPSPLIHWVAPDDRLVGNSS--------RTAVYDNG-TLDILITTSQDSGPFTCIAAN 363
Query: 344 IRGNASG--EISL-DLPEINLATT 364
G A+ E+S+ LP ++ +T+
Sbjct: 364 AAGEATATVEVSIVQLPHLSNSTS 387
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/190 (25%), Positives = 84/190 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP C C+ LC +P +D L L N I ++ ++ F ++ GL++
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMTGLVD 80
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + I + +F L L + L N++ L +DT G L+ L +N N +
Sbjct: 81 LT---LSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLG 137
Query: 143 ELRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F L L+ ++L + +H + D++ + L L+L+ N L H++E F
Sbjct: 138 GIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQ 197
Query: 202 NLKTLSLDGN 211
L L L N
Sbjct: 198 KLARLDLTSN 207
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 220 (82.5 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 64/231 (27%), Positives = 101/231 (43%)
Query: 32 WTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKN 90
W + + F LP+ ++ LDL +N + L + F GL LQ ++L
Sbjct: 83 WLYSNNISSIQPGTFRHLPA-----LEELDLGDNPHLRVLAPDTFH--GLRRLQALHLYR 135
Query: 91 SGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFP 150
+ + F+ L L + L +N + +L D F L L+L+GN + L G F
Sbjct: 136 CQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFR 195
Query: 151 KLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDG 210
LP L + L ++ +VH+ A L L L L N L L P L+ L L+
Sbjct: 196 GLPSLDRLLLHANRLATVHRRAFRGLARLTILYLFNNSLAALPGDPLAALPALQFLRLNA 255
Query: 211 NPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF-ACP 260
NPW CDC R W ++++ S P+ C P + ++ ++F CP
Sbjct: 256 NPWACDCRARPLWAWFRRTRVSSSPVPCASPPHRRGTDLRHLRPRDFDGCP 306
Score = 210 (79.0 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 70/217 (32%), Positives = 101/217 (46%)
Query: 17 GSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
GSP CP C C + + C+ NF+++P+ L + L L NN I L F
Sbjct: 22 GSPA---CPALCTCY--VSPPTVSCQANNFSSVPTGLPPGARRLFLQNNVIRALRAGTFG 76
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLY 135
+ ++L ++ I + TF++L L E+DL DN + L DTF G RL+ L+
Sbjct: 77 P----STVTLWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVLAPDTFHGLRRLQALH 132
Query: 136 LNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
L + L + F L L+ + LQ + + D L L L L+GNRL+ LSE
Sbjct: 133 LYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEG 192
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLY 232
VF P+L L L N H R+FR + LY
Sbjct: 193 VFRGLPSLDRLLLHANR-LATVHRRAFRGLARLTILY 228
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 236 (88.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 65/232 (28%), Positives = 110/232 (47%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
RL+ L L+GN + +R G F L L+ + L H Q+ + ++A L LE LNL+ N L
Sbjct: 213 RLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSL 272
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTE---PGMLQT 246
L +F P L+ + L+ NPW C+C + + +W LK + S+ C P L+
Sbjct: 273 HSLPHDLFTPLQKLERVHLNHNPWVCNCDVL-WLSWWLKETVPSNTTCCARCHAPPYLKG 331
Query: 247 KHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPEPTILWLL-NGQVLHNS 304
K+ ++ F C V ++ + G + C G ++ W+ NG ++ +
Sbjct: 332 KYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSMTSVNWITPNGTLMTHG 390
Query: 305 SFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
S+ + L + +++ T NVT D G+YTC N GN + L++
Sbjct: 391 SYRV----RISVLHDGTLNFT--NVTLRDTGQYTCMVTNSAGNTTATAVLNV 436
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + +C + +P + ++ + L+L N I + + FK L +L
Sbjct: 40 CPAVCSCSNQASR--VICARQHLEEVPDNISNNTRYLNLQENTIQVIKSDTFKH--LRHL 95
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR++ F L L ++L DN++ + F +L+ L+L NPI
Sbjct: 96 EILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIET 155
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L F ++P L+ ++L + + + A + L L LNL LK + P
Sbjct: 156 LPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIPNLT--PLVR 213
Query: 203 LKTLSLDGN 211
L+ L L GN
Sbjct: 214 LEELELSGN 222
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 50/188 (26%), Positives = 91/188 (48%)
Query: 60 LDLNN-NKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
LDL K+ Y++ AF +GL+NL+ + L G++++ T L L E++LS N++
Sbjct: 170 LDLGELKKLDYISDAAF--VGLINLRYLNLGMCGLKDIPNLT--PLVRLEELELSGNRLE 225
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ +F G + L+ L+L + ++ + F L L+ + L H +HS+ D L
Sbjct: 226 IIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQK 285
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCD-CHLRSFRNWLLKSKLYSHPLS 237
LE ++LN N + V + + LK ++ N CC CH + +L +
Sbjct: 286 LERVHLNHNPWV-CNCDVLWLSWWLKE-TVPSNTTCCARCHAPPYLKGKYIGELDQSHFT 343
Query: 238 CTEPGMLQ 245
C P +++
Sbjct: 344 CYAPVIVE 351
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 248 (92.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C S C A+P + + + LDL+ N I+ +TK F
Sbjct: 29 PPAAACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFT-- 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL NL+ ++L+++ + + R F+ L L + L+ N++ L + F +L L L+
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N I + F + +K ++L + I + A L LE L LN N + + + F
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
P ++TL L N CDCHL +WL + + C P L+ DV+ +E+
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYV 262
Query: 259 CP 260
CP
Sbjct: 263 CP 264
Score = 232 (86.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+AN + PS ++D ++ + + G++ ++ L+ + I+ + F
Sbjct: 274 NANSLSCPSACSCSNNIVDCRGKGLTEIPANLPE--GIVEIR---LEQNSIKSIPAGAFI 328
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L +D+S NQI+ + D F G L L L GN ITE+ G F L L+ + L
Sbjct: 329 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNA 388
Query: 163 CQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSF 222
+I+ + + L L L+L N+L+ +S+ +F P +++TL L NP+ CDCHL+
Sbjct: 389 NKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWL 448
Query: 223 RNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++L + + + C+ P L K +K+++F C
Sbjct: 449 ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 485
Score = 209 (78.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 51/162 (31%), Positives = 82/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 553 FKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLML 612
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V+ D L+++ L+L NR+ +S F +L T++L NP+ C+CH+
Sbjct: 613 RSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMA 672
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 673 WLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Score = 177 (67.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/192 (29%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + + +PS L L LN+N I+ L FK L N
Sbjct: 505 CPEKCRCEGTIVD----CSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKK--LPN 558
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N I+
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLIS 618
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 619 CVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWL 678
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 679 RKRRIVSGNPRC 690
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKE--AFKSIGLL 81
CP+ C C T+ + C + LP + D+ L L N ++ + KE F+ + L+
Sbjct: 725 CPEQCTCVETVVR----CSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLI 780
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + TF ++ L + LS N++ + F G L+VL L+GN I
Sbjct: 781 DLS-----NNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 142 TELRAGQFPKLPYLKTIELQHCQIH 166
+ + G F L L + L +H
Sbjct: 836 SSVPEGSFNDLTSLSHLALGINPLH 860
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
+L ++ L+ N I+ L F + +L T+ L + ++ + A L +L L L+GN +
Sbjct: 776 QLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTK 247
+ E F +L L+L NP CDC LR W+ Y P C+ P + +
Sbjct: 836 SSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAG--YKEPGIARCSSPESMADR 893
Query: 248 HWDDVKAQEFACPPNVTI 265
F C V I
Sbjct: 894 LLLTTPTHRFQCKGPVDI 911
Score = 42 (19.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 327 FNVTDLDAGEYTCYAENIRGNASGEISLDLP 357
F+V D+ EY C + A SL P
Sbjct: 251 FSVADVQKKEYVCPGPHSEAPACNANSLSCP 281
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 248 (92.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C S C A+P + + + LDL+ N I+ +TK F
Sbjct: 29 PPAAACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFT-- 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL NL+ ++L+++ + + R F+ L L + L+ N++ L + F +L L L+
Sbjct: 83 GLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N I + F + +K ++L + I + A L LE L LN N + + + F
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
P ++TL L N CDCHL +WL + + C P L+ DV+ +E+
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYV 262
Query: 259 CP 260
CP
Sbjct: 263 CP 264
Score = 232 (86.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+AN + PS ++D ++ + + G++ ++ L+ + I+ + F
Sbjct: 274 NANSLSCPSACSCSNNIVDCRGKGLTEIPANLPE--GIVEIR---LEQNSIKSIPAGAFI 328
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L +D+S NQI+ + D F G L L L GN ITE+ G F L L+ + L
Sbjct: 329 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNA 388
Query: 163 CQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSF 222
+I+ + + L L L+L N+L+ +S+ +F P +++TL L NP+ CDCHL+
Sbjct: 389 NKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWL 448
Query: 223 RNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++L + + + C+ P L K +K+++F C
Sbjct: 449 ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 485
Score = 209 (78.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 51/162 (31%), Positives = 82/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 553 FKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLML 612
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V+ D L+++ L+L NR+ +S F +L T++L NP+ C+CH+
Sbjct: 613 RSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMA 672
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 673 WLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Score = 177 (67.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/192 (29%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + + +PS L L LN+N I+ L FK L N
Sbjct: 505 CPEKCRCEGTIVD----CSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKK--LPN 558
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N I+
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLIS 618
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 619 CVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWL 678
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 679 RKRRIVSGNPRC 690
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKE--AFKSIGLL 81
CP+ C C T+ + C + LP + D+ L L N ++ + KE F+ + L+
Sbjct: 725 CPEQCTCVETVVR----CSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLI 780
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + TF ++ L + LS N++ + F G L+VL L+GN I
Sbjct: 781 DLS-----NNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 142 TELRAGQFPKLPYLKTIELQHCQIH 166
+ + G F L L + L +H
Sbjct: 836 SSVPEGSFNDLTSLSHLALGINPLH 860
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
+L ++ L+ N I+ L F + +L T+ L + ++ + A L +L L L+GN +
Sbjct: 776 QLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTK 247
+ E F +L L+L NP CDC LR W+ Y P C+ P + +
Sbjct: 836 SSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAG--YKEPGIARCSSPESMADR 893
Query: 248 HWDDVKAQEFACPPNVTI 265
F C V I
Sbjct: 894 LLLTTPTHRFQCKGPVDI 911
Score = 42 (19.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 327 FNVTDLDAGEYTCYAENIRGNASGEISLDLP 357
F+V D+ EY C + A SL P
Sbjct: 251 FSVADVQKKEYVCPGPHSEAPACNANSLSCP 281
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 236 (88.1 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 68/236 (28%), Positives = 109/236 (46%)
Query: 28 CRCKWTLGKKSALCKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C+ + C++ FT + L S I L LN N ++ L F + N
Sbjct: 8 CPCEEKENVLNINCENKGFTTISLLLPPPSKIYQLFLNGNALTRLFPNEF--VNYSNAVT 65
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++L N+ ++E+H F L L + L++N++ L +DTFLG + L+ L + N I+ +
Sbjct: 66 LHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLKEDTFLGLESLEYLQADYNYISAIE 125
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
AG F KL LK + L + S+ + + L L+L GNRLK + V +
Sbjct: 126 AGAFNKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKMMPFAGVLEHIGGIM 184
Query: 205 TLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 185 EIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 239
Score = 187 (70.9 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 77/273 (28%), Positives = 118/273 (43%)
Query: 16 TGSPDWTDCPDTCRC-KWTLGKK-SALCKD---ANFTAL-PSTLDSDIQVLDLNNNKISY 69
T SP CPD C C +L + C++ +N + L P L N ++ Y
Sbjct: 310 TKSPVPITCPDGCICTSQSLDNGLNVNCQEKKISNISELHPKPTTPKKLYLTSNYLQVIY 369
Query: 70 LTKEA-FKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGN 128
T A + S+ LL +L N+ I + F LT L + L+ N + L+ F G
Sbjct: 370 RTDLAEYSSLDLL-----HLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFDGL 424
Query: 129 DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNR 188
L+ LYL N I E+ F L L + L + + S+ D + T+L LNL N
Sbjct: 425 QSLQYLYLEYNVIKEILPHTFDTLSNLHLLFLNNNLLRSL-PDNVFGGTSLTRLNLRNNH 483
Query: 189 LKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLK----SKLYSHPLSCTEPGM 243
HL V L + L NPW C C + RNW+ + + S+P +
Sbjct: 484 FSHLPVRGVLDRLSALIQIDLQENPWDCTCDIMGLRNWIEQVTDQNSQQSNPPVVINEVI 543
Query: 244 LQ--TKH-WDDVK--AQEFACPPNVTIKESMVI 271
+ TKH + +K ++E CP N ++ ES ++
Sbjct: 544 CESPTKHSGEHLKFLSKEAICPENPSLSESSLL 576
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 234 (87.4 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 78/327 (23%), Positives = 151/327 (46%)
Query: 43 DANFTALPS-TLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ + S ++ L L NN I + +AF L +L+R+ L + +
Sbjct: 134 DNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSR--LPSLRRLDLGELKRLSYISS 191
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L + + L RL L ++GN +T ++ F L +L+ +
Sbjct: 192 GAFQGLSNLRYLNLGMCNLKEVPNIQPL--IRLDELEMSGNQLTVIQPSSFKGLVHLQKL 249
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ H Q+ ++ +++ L +L LNL N L L ++ P +L+ + L NPW C+C
Sbjct: 250 WMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLHHNPWNCNCD 309
Query: 219 LRSFRNWLLKSKLYSHP---LSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W L+ + ++ C P L+ ++ ++ F C V I+ + +
Sbjct: 310 IL-WLSWWLRETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIIEPPVDLNLTE 368
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C + ++ WL NG ++ + + + + D +++ T NVT D
Sbjct: 369 GMAAELKCRT--NSVTSVSWLTPNGSIITHGTLKMRINVQNDG----TLNFT--NVTLQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEIN 360
G YTCY N+ GN S L++ ++
Sbjct: 421 TGTYTCYVSNMLGNTSASAILNVTSVD 447
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/189 (26%), Positives = 87/189 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C +P + ++ + L+L +N+I + ++FK L +L
Sbjct: 48 CPSVCSCSNQFSK--VICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIKVDSFKH--LRHL 103
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F LT L ++L DN++ + F +LK L+L NPI
Sbjct: 104 EILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIES 163
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F +LP L+ ++L + + + A L+ L LNL LK + P
Sbjct: 164 IPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPN--IQPLIR 221
Query: 203 LKTLSLDGN 211
L L + GN
Sbjct: 222 LDELEMSGN 230
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 236 (88.1 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 76/253 (30%), Positives = 113/253 (44%)
Query: 16 TGSPDWTDCPDTCRCKW---TLGKKSALCKDANFTALPSTLD--SDIQVLDLNNNKISYL 70
T P T CP C CK LG S C++ N ++ + S+ + L +N N I +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGL-SVNCQEKNIQSMSELIPKPSNAKKLHVNGNSIKDV 392
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
F L+L ++L ++ I + D F+ LT L + L+ NQI L+ + F G
Sbjct: 393 DISDFTEFEGLDL--LHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIERLYPEMFSGLHN 450
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ LYL N I E+ AG F +P L+ + L + + S+ + L LNL N+
Sbjct: 451 LQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPV-YIFSGAPLARLNLRNNKFM 509
Query: 191 HLSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTK 247
+L S V L + L+GNPW C C L + + WL L + L C P
Sbjct: 510 YLPVSGVLDQLQALTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVMKELKCETPVQFANI 569
Query: 248 HWDDVKAQEFACP 260
+K E CP
Sbjct: 570 ELKSLK-NEILCP 581
Score = 193 (73.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/210 (28%), Positives = 96/210 (45%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIG-LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLS 113
S+ L+ NN ++ L F + ++LQ L N+ ++ + F L+ L ++ L+
Sbjct: 59 SNFYHLNFQNNFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGLSALKQLHLN 115
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+N++ L DTFLG + L+ L + N I + G F KL LK + L I S D +
Sbjct: 116 NNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLI-SFLPDNI 174
Query: 174 IHLTALESLNLNGNRLKHLSE-SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSK 230
+L L++ GNR++ L V + L L+ NPW C C L + WL +
Sbjct: 175 FRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYN 234
Query: 231 LYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+Y C P L + + QE CP
Sbjct: 235 IYIGEAICETPSDLYGRLLKETNKQEL-CP 263
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
VL +N K+S K N + +N+ + ++ +TF + V + L +N++
Sbjct: 38 VLYVNCEKVSVYRPNQLKP-PWSNFYHLNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQ 96
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ FLG LK L+LN N + LRA F + L+ ++ + I + + A L
Sbjct: 97 NIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHK 156
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L LN N + L +++F +L L + GN
Sbjct: 157 LKVLILNDNLISFLPDNIF-RFASLTHLDIRGN 188
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 247 (92.0 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 68/242 (28%), Positives = 110/242 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C S C A+P + + + LDL+ N I+ +TK F
Sbjct: 29 PPAAACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFA-- 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL NL+ ++L+++ + + R F+ L L + L+ N++ L + F +L L L+
Sbjct: 83 GLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSE 142
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N I + F + +K ++L + I + A L LE L LN N + + + F
Sbjct: 143 NQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFN 202
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
P ++TL L N CDCHL +WL + + C P L+ DV+ +E+
Sbjct: 203 HMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGFSVADVQKKEYV 262
Query: 259 CP 260
CP
Sbjct: 263 CP 264
Score = 235 (87.8 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+AN + PS ++D ++ + + G++ ++ L+ + I+ + F
Sbjct: 274 NANSLSCPSACSCSNNIVDCRGKGLTEIPANLPE--GIVEIR---LEQNSIKSIPAGAFT 328
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L +D+S NQI+ + D F G L L L GN ITE+ G F L L+ + L
Sbjct: 329 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNA 388
Query: 163 CQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSF 222
+I+ + + L L L+L N+L+ +S+ +F P +++TL L NP+ CDCHL+
Sbjct: 389 NKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWL 448
Query: 223 RNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++L + + + C+ P L K +K+++F C
Sbjct: 449 ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 485
Score = 205 (77.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 50/162 (30%), Positives = 81/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 553 FKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLML 612
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V D L+++ L+L NR+ ++ F +L T++L NP+ C+CH+
Sbjct: 613 RSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMA 672
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 673 WLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Score = 178 (67.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 57/192 (29%), Positives = 85/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + +PS L L LN+N IS L FK L N
Sbjct: 505 CPEKCRCEGTIVD----CSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIFKK--LPN 558
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N I+
Sbjct: 559 LRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLIS 618
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 619 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHMAWLGRWL 678
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 679 RKRRIVSGNPRC 690
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKE--AFKSIGLL 81
CP+ C C T+ + C + ALP + D+ L L N ++ + KE AF+ + L+
Sbjct: 725 CPEQCTCVETVVR----CSNRGLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLI 780
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + TF ++ L + LS N++ + F G L+VL L+GN I
Sbjct: 781 DLS-----NNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 142 TELRAGQFPKLPYLKTIELQHCQIH 166
+ + G F L L + L +H
Sbjct: 836 SSVPEGSFNDLTSLSHLALGTNPLH 860
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
+L ++ L+ N I+ L F + +L T+ L + ++ + A L +L L L+GN +
Sbjct: 776 QLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTK 247
+ E F +L L+L NP CDC LR W+ Y P C+ P + +
Sbjct: 836 SSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAG--YKEPGIARCSSPESMADR 893
Query: 248 HWDDVKAQEFACPPNVTI 265
F C V I
Sbjct: 894 LLLTTPTHRFQCKGPVDI 911
Score = 42 (19.8 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 327 FNVTDLDAGEYTCYAENIRGNASGEISLDLP 357
F+V D+ EY C + A SL P
Sbjct: 251 FSVADVQKKEYVCPGPHSEAPACNANSLSCP 281
>MGI|MGI:2136810 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2136810 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:P21809 MEROPS:I43.001
CTD:57622 eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K EMBL:AB243740 EMBL:DQ070870
EMBL:DQ314497 EMBL:AK090175 EMBL:BC004018 IPI:IPI00468602
IPI:IPI00855061 IPI:IPI00895406 RefSeq:NP_001135393.1
RefSeq:NP_085039.2 UniGene:Mm.483073 ProteinModelPortal:Q2WF71
SMR:Q2WF71 IntAct:Q2WF71 STRING:Q2WF71 PhosphoSite:Q2WF71
PaxDb:Q2WF71 PRIDE:Q2WF71 Ensembl:ENSMUST00000055110
Ensembl:ENSMUST00000108288 GeneID:80749 KEGG:mmu:80749
UCSC:uc009fza.1 UCSC:uc009fzb.2 UCSC:uc009fzc.2
GeneTree:ENSGT00660000095307 InParanoid:Q2WF71 NextBio:350107
Bgee:Q2WF71 Genevestigator:Q2WF71 Uniprot:Q2WF71
Length = 766
Score = 235 (87.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 88/312 (28%), Positives = 138/312 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I + AF L L+ ++L ++ + EV D + L L + L +NQI
Sbjct: 94 LTLSRNTIGQVAAGAFAD--LRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRK 151
Query: 120 LHQ---DTFLGN-DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ D FL + L + Y N + GQ L T+ L H I + + +
Sbjct: 152 VESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNL---NTLTLDHNLIDHIAEGTFVQ 208
Query: 176 LTALESLNLNGNRLKHLSESVFF-------PTPNLK-TLSLDGNPWCCDCHLRSFRNWLL 227
L L L++ NRL L F P P T+S GNP C+C L WL
Sbjct: 209 LHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHCNCELL----WLR 264
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIK---ESMVIREAGGNVTMSCY 283
+ +C P L +++ + +EF C PP +T + ++V+ G V++ C
Sbjct: 265 RLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVE--GQAVSLRCR 322
Query: 284 VYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAE 342
GDPEP + W+ +G++L NSS + GD + V+IT D+G +TC A
Sbjct: 323 AVGDPEPVVHWVAPDGRLLGNSSRTRVR---GDGTLD--VTITTLR----DSGTFTCIAS 373
Query: 343 NIRGNASGEISL 354
N G A+ + +
Sbjct: 374 NAAGEATAPVEV 385
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 44/189 (23%), Positives = 84/189 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P +D + L L +N I+ + + F + + +L
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFAN--MTSL 91
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I +V F L L + L N++A + D G L+ L L N I +
Sbjct: 92 VHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRK 151
Query: 144 LRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F L ++ ++L + + ++ +A+ + L +L L+ N + H++E F
Sbjct: 152 VESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHK 211
Query: 203 LKTLSLDGN 211
L L + N
Sbjct: 212 LVRLDMTSN 220
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00076
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK-YLTILVEVDLSDN 115
++ L L++N+++ + + + +G NL+ + L N+ IR+V F +L+ + ++DLS N
Sbjct: 115 LRALHLDSNRLAEVRGDQLRGLG--NLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYN 172
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L + L L L+ N I + G F +L L +++ ++H + D L
Sbjct: 173 NLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLF- 231
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHL 219
L G K PTP T+S GNP C+C L
Sbjct: 232 ------LRSQGGGPKP-------PTP--LTVSFGGNPLHCNCEL 260
>RGD|1304707 [details] [associations]
symbol:Lrfn1 "leucine rich repeat and fibronectin type III
domain containing 1" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1304707 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 CTD:57622
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352 KO:K16354
OMA:PRVSHVC OrthoDB:EOG4TMR1K GeneTree:ENSGT00660000095307
EMBL:AABR03001365 IPI:IPI00360897 RefSeq:NP_001121166.1
UniGene:Rn.87338 ProteinModelPortal:P0C7J6
Ensembl:ENSRNOT00000057073 GeneID:365222 KEGG:rno:365222
UCSC:RGD:1304707 NextBio:686907 ArrayExpress:P0C7J6
Genevestigator:P0C7J6 Uniprot:P0C7J6
Length = 766
Score = 235 (87.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 88/312 (28%), Positives = 138/312 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I + AF L L+ ++L ++ + EV D + L L + L +NQI
Sbjct: 94 LTLSRNTIGQVAAGAFAD--LRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRK 151
Query: 120 LHQ---DTFLGN-DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ D FL + L + Y N + GQ L T+ L H I + + +
Sbjct: 152 VESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNL---NTLTLDHNLIDHIAEGTFVQ 208
Query: 176 LTALESLNLNGNRLKHLSESVFF-------PTPNLK-TLSLDGNPWCCDCHLRSFRNWLL 227
L L L++ NRL L F P P T+S GNP C+C L WL
Sbjct: 209 LHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGGNPLHCNCELL----WLR 264
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIK---ESMVIREAGGNVTMSCY 283
+ +C P L +++ + +EF C PP +T + ++V+ G V++ C
Sbjct: 265 RLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVE--GQAVSLRCR 322
Query: 284 VYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAE 342
GDPEP + W+ +G++L NSS + GD + V+IT D+G +TC A
Sbjct: 323 AVGDPEPVVHWVAPDGRLLGNSSRTRVR---GDGTLD--VTITTLR----DSGTFTCIAS 373
Query: 343 NIRGNASGEISL 354
N G A+ + +
Sbjct: 374 NAAGEATAPVEV 385
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 44/189 (23%), Positives = 84/189 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P +D + L L +N I+ + + F + + +L
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFAN--MTSL 91
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I +V F L L + L N++A + D G L+ L L N I +
Sbjct: 92 VHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRK 151
Query: 144 LRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F L ++ ++L + + ++ +A+ + L +L L+ N + H++E F
Sbjct: 152 VESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHK 211
Query: 203 LKTLSLDGN 211
L L + N
Sbjct: 212 LVRLDMTSN 220
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00076
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK-YLTILVEVDLSDN 115
++ L L++N+++ + + + +G NL+ + L N+ IR+V F +L+ + ++DLS N
Sbjct: 115 LRALHLDSNRLAEVRGDQLRGLG--NLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYN 172
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L + L L L+ N I + G F +L L +++ ++H + D L
Sbjct: 173 NLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLF- 231
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHL 219
L G K PTP T+S GNP C+C L
Sbjct: 232 ------LRSQGGGPKP-------PTP--LTVSFGGNPLHCNCEL 260
>UNIPROTKB|Q9GZU5 [details] [associations]
symbol:NYX "Nyctalopin" species:9606 "Homo sapiens"
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005622 "intracellular" evidence=IDA]
GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0050896 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471141
Orphanet:215 EMBL:Z93015 EMBL:AJ278865 EMBL:AF254868 EMBL:BC112242
IPI:IPI00072576 RefSeq:NP_072089.1 UniGene:Hs.302019
ProteinModelPortal:Q9GZU5 SMR:Q9GZU5 STRING:Q9GZU5
PhosphoSite:Q9GZU5 DMDM:23396778 PRIDE:Q9GZU5 DNASU:60506
Ensembl:ENST00000342595 Ensembl:ENST00000378220 GeneID:60506
KEGG:hsa:60506 UCSC:uc004dfh.2 CTD:60506 GeneCards:GC0XP041306
HGNC:HGNC:8082 MIM:300278 MIM:310500 neXtProt:NX_Q9GZU5
PharmGKB:PA31871 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 InParanoid:Q9GZU5 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W PhylomeDB:Q9GZU5 GenomeRNAi:60506 NextBio:65415
Bgee:Q9GZU5 CleanEx:HS_NYX Genevestigator:Q9GZU5
GermOnline:ENSG00000188937 Uniprot:Q9GZU5
Length = 481
Score = 231 (86.4 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 65/202 (32%), Positives = 97/202 (48%)
Query: 43 DANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
D F +P L +++ L +I + + + GL L+ + L+ + +R VH
Sbjct: 168 DNLFRRVPGALRGLANLTHAHLERGRIEAVASSSLQ--GLRRLRSLSLQANRVRAVHAGA 225
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F +L + L+DN +A L D F G RL+ L L GN + + F L L+ + L
Sbjct: 226 FGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYL 285
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
I V + A +L+ L +L+LNGNRL L+ F P L L L NPWCCDC L
Sbjct: 286 DRNSIAFVEEGAFQNLSGLLALHLNGNRLTVLAWVAFQPGFFLGRLFLFRNPWCCDCRLE 345
Query: 221 SFRNWLLKSKLYSHPLSCTEPG 242
R+W+ S + + C PG
Sbjct: 346 WLRDWMEGSGRVTD-VPCASPG 366
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 50/189 (26%), Positives = 84/189 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C S C A +P+ L + +DL+ N + +L + AF + L +L
Sbjct: 31 CPAACACSTVERGCSVRCDRAGLLRVPAELPCEAVSIDLDRNGLRFLGERAFGT--LPSL 88
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+R+ L+++ + + FK L L E+ L+ N + +LH TF RL+ L L +
Sbjct: 89 RRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALSRLRRLDLAACRLF 148
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ +LP L+ + V AL L L +L R++ ++ S
Sbjct: 149 SVPERLLAELPALRELAAFDNLFRRV-PGALRGLANLTHAHLERGRIEAVASSSLQGLRR 207
Query: 203 LKTLSLDGN 211
L++LSL N
Sbjct: 208 LRSLSLQAN 216
>RGD|727812 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA;ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA;ISO;ISS;IDA] InterPro:IPR001611
PROSITE:PS51450 RGD:727812 GO:GO:0016021 GO:GO:0009897
InterPro:IPR003591 SMART:SM00369 GO:GO:0004872 GO:GO:0045121
GO:GO:0007166 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OrthoDB:EOG4FXR7G eggNOG:NOG254142
EMBL:AF532861 EMBL:AY311478 EMBL:BC129084 IPI:IPI00327090
IPI:IPI00734618 RefSeq:NP_852042.1 UniGene:Rn.22361
ProteinModelPortal:Q80WD0 Ensembl:ENSRNOT00000067414 GeneID:303311
KEGG:rno:303311 InParanoid:Q80WD0 NextBio:651118
ArrayExpress:Q80WD0 Genevestigator:Q80WD0
GermOnline:ENSRNOG00000003121 Uniprot:Q80WD0
Length = 445
Score = 230 (86.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 67/217 (30%), Positives = 100/217 (46%)
Query: 45 NFTAL-PSTLDSDIQV--LDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
N T + P+T + + + LDL +N+ + L E F+ GL+ L +YL G+ +
Sbjct: 87 NITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSSLPAGI 144
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F L L + L DN I +L D F+ L L+L+GN + L G F L L + L
Sbjct: 145 FGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLL 204
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
Q+ VH A L L +L L N L L P L+ L L+GN W C C R
Sbjct: 205 HENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNGNAWDCGCRAR 264
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF 257
S WL + + S + C P + Q + ++ ++F
Sbjct: 265 SLWEWLRRFRGSSSVVPCATPELRQGQDLKSLRVEDF 301
Score = 199 (75.1 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 70/220 (31%), Positives = 104/220 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C+ NF A+P + D + + L NN I++L + F S ++ L
Sbjct: 25 CPRDCVCYPS--PMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITFLQQGHF-SPAMVTL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
IY N I + +TF+ L E+DL DN Q+ L +TF G +L LYL ++
Sbjct: 82 W-IYSNN--ITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLS 138
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L AG F L L+ + LQ I + D + L L L L+GN+L L + +F N
Sbjct: 139 SLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVN 198
Query: 203 LKTLSLDGNP--WCCDCHLRSFRNWLLKSKLYSHPLSCTE 240
L L L N W H ++F + + L+ S TE
Sbjct: 199 LDRLLLHENQLQWV---HHKAFHDLHRLTTLFLFNNSLTE 235
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 249 (92.7 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 65/237 (27%), Positives = 117/237 (49%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C T++P + +D++ L+L N ++ + + F+ L L
Sbjct: 73 CPRVCSCTGL----NVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQR--LTKL 126
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L ++ I + R++F+ L L + L++N++ + ++ + L L ++ N IT
Sbjct: 127 RMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITT 186
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F L++++L + QI + + A L LE L LN N L L ++F L
Sbjct: 187 VGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRL 246
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS-CTEPGMLQTKHWDDVKAQEFAC 259
+ L L NP+ CDCHL S+ + L+S P + C P L+ ++ D+ QEF C
Sbjct: 247 RALRLSDNPFACDCHL-SWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKC 302
Score = 214 (80.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 51/172 (29%), Positives = 88/172 (51%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L+ + I E+ +F L +DLS+N I+ + D G +L L L GN I +L +G
Sbjct: 353 LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSG 412
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
F L L+ + L +I + KDA L +L L+L N ++ L+ F ++KT+
Sbjct: 413 VFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVH 472
Query: 208 LDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L NP+ CDC+LR ++L K+ + + C P + + + ++ ++F C
Sbjct: 473 LAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFKC 524
Score = 179 (68.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 92 GIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGN-DRLKVLYLNGNPITELRAGQFP 150
G++E+ RD + T L+ L+DN++ + D G L L L N +T + F
Sbjct: 560 GLKEIPRDIPLHTTELL---LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE 616
Query: 151 KLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDG 210
+++ ++L +I + + L L++LNL N++ + F +L +L+L
Sbjct: 617 GASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLAS 676
Query: 211 NPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
NP+ C+CHL F WL K L C P ++ D+ EF C
Sbjct: 677 NPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKC 725
Score = 168 (64.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 109 EVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSV 168
E+ L N+I +H + L L L+ N IT L F L L T+ + + ++ +
Sbjct: 770 ELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCL 829
Query: 169 HKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLK 228
+ AL L L L+L+GNR+ L E F +L ++L NP CDC L+ F +W+
Sbjct: 830 QRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSDWI-- 887
Query: 229 SKL-YSHP--LSCTEPGMLQTKHWDDVKAQEFAC 259
KL Y P C EP ++ K + F C
Sbjct: 888 -KLDYVEPGIARCAEPEQMKDKLILSTPSSSFVC 920
Score = 157 (60.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 57/191 (29%), Positives = 86/191 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC + C++ + T++P TL D L L N I+ L ++F S L
Sbjct: 319 CPHPCRCADGIVD----CREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFR--RL 372
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I + D L L + L N+I L F G L++L LN N I+
Sbjct: 373 RRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISC 432
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+R F L L + L I S+ A++S+ + HL+++ F NL
Sbjct: 433 IRKDAFRDLHSLSLLSLYDNNIQSLANGTF---DAMKSI-----KTVHLAKNPFICDCNL 484
Query: 204 KTLS--LDGNP 212
+ L+ L NP
Sbjct: 485 RWLADYLHKNP 495
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP +C C T+ + C +P + ++ L L +N+I + E + L +L
Sbjct: 739 CPPSCTCTGTVVR----CSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRH--LRSL 792
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
R+ L N+ I + TF LT L + +S N++ L + G + L+VL L+GN I+
Sbjct: 793 TRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISM 852
Query: 144 LRAGQFPKLPYLKTIEL 160
L G F L L I L
Sbjct: 853 LPEGSFEDLKSLTHIAL 869
Score = 39 (18.8 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 329 VTDLDAGEYTCYAENIRG 346
+ DL E+ C +EN G
Sbjct: 715 IKDLPHSEFKCSSENSEG 732
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 239 (89.2 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 76/305 (24%), Positives = 137/305 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF-KYLTILVEVDLSDN 115
++ L ++ N++S + K GL+NL+ + L N+ I + +F +++ + ++DLS N
Sbjct: 101 LRALHMDGNRLSVINSNQLK--GLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYN 158
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L + + L L+ N I + G F L L +++ ++ ++ D L
Sbjct: 159 NLRTLPWEAIARMTNINTLTLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQ 218
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
+ LSE + L T+S GNP C+C L WL +
Sbjct: 219 HAQV------------LSEPKTSSSSRL-TVSFGGNPLHCNCELL----WLRRLTREDDL 261
Query: 236 LSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV---IREAGGNVTMSCYVYGDPEPTI 292
+C P L K++ ++ +EF C P + K + + E G VT+ C GDP+P I
Sbjct: 262 ETCASPEHLMDKYFWSIQEEEFICEPPLITKHQVTKPYVMEGQG-VTLKCKAMGDPDPAI 320
Query: 293 LWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGE 351
W +G+++HN+S +L + G + IT D+G + C A N G A+
Sbjct: 321 HWRFPDGKLVHNNSRTILYDN-GTL----DILITTLK----DSGAFNCVASNAAGIATAA 371
Query: 352 ISLDL 356
+ + +
Sbjct: 372 VHVHM 376
Score = 144 (55.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L ++ I V R F +T LV + LS N I+ + F+G L+ L+++GN ++ + +
Sbjct: 58 LTDNFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSN 117
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTA-LESLNLNGNRLKHLSESVFFPTPNLKTL 206
Q L L+ + L + QIH + + + A +E L+L+ N L+ L N+ TL
Sbjct: 118 QLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTL 177
Query: 207 SLDGN 211
+LD N
Sbjct: 178 TLDHN 182
Score = 41 (19.5 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 489 HLPTSTYGNIFISVSVSQEPPGSDPPKY 516
H+ + T G+ + S+EPP S K+
Sbjct: 570 HVHSQTNGSRSAATKQSEEPPESPAGKH 597
>UNIPROTKB|G3N218 [details] [associations]
symbol:G3N218 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:DAAA02073610
Ensembl:ENSBTAT00000066321 Uniprot:G3N218
Length = 478
Score = 229 (85.7 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 43 DANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
D F +P L +++ L ++I + + +GL L+ + L+ + +R VH
Sbjct: 164 DNLFRRVPGALRGLANLTHAHLERSRIEAVASSSL--LGLRRLRSLSLQGNRVRAVHGGA 221
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F+ + L + L+DN +A L D FLG RL+ L L GN + + F +L L+ + L
Sbjct: 222 FRDCSALEHLLLNDNLLAALPADAFLGLRRLRTLNLGGNALGRVVRAWFAELAELELLYL 281
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+I V + A +L+ L +L+LNGN L L+ + F P L L L NPW CDC L
Sbjct: 282 DRNRIAFVEEGAFQNLSGLLALHLNGNHLTVLAWAAFQPGFFLGRLFLFRNPWRCDCRLE 341
Query: 221 SFRNWLLKSKLYSHPLSCTEPG 242
R+W+ +S + + C PG
Sbjct: 342 WLRDWM-ESFGRTADVPCASPG 362
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/189 (26%), Positives = 86/189 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + S C A +P+ + +DL+ N + +L + AF + L +L
Sbjct: 27 CPAACVCSSVERRCSVRCDRAGLLRVPAEFPCEAASIDLDRNGLRFLGERAFGT--LPSL 84
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+R+ L+++ + + FK L L E+ L+ N + +LH TF RL+ L L +
Sbjct: 85 RRLSLRHNNLSFITPGAFKGLPRLAELSLAHNGDLRYLHARTFTALGRLRRLDLTVCRLF 144
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ +LP L+ + V AL L L +L +R++ ++ S
Sbjct: 145 SVPERLLAELPALRELAAFDNLFRRV-PGALRGLANLTHAHLERSRIEAVASSSLLGLRR 203
Query: 203 LKTLSLDGN 211
L++LSL GN
Sbjct: 204 LRSLSLQGN 212
>UNIPROTKB|F1P1D7 [details] [associations]
symbol:F1P1D7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:AADN02025897 EMBL:AADN02025898 IPI:IPI00574714
ProteinModelPortal:F1P1D7 Ensembl:ENSGALT00000034958 Uniprot:F1P1D7
Length = 413
Score = 227 (85.0 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 76/252 (30%), Positives = 114/252 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C + + C+ NF +P + D + + L NN+I+ L + F S
Sbjct: 20 PGAASCPTDCVCYPS--PMTVSCQAHNFVTIPEGIPEDSERIFLQNNQITLLLRGHF-SP 76
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLN 137
++ L IY N I + +TF+ L E+DL DN+ + L +TF G +L LYL
Sbjct: 77 SMVTLW-IYSNN--ITFIDPNTFEGFVNLEELDLGDNRYLRALAANTFQGLVKLHALYLY 133
Query: 138 GNPITELRAGQFPKLPYLKTIELQ--H--------CQ--IHSVHKDALIHLTALESLNLN 185
++ L +G F L L T + H CQ + +H+ A L L +L L
Sbjct: 134 KCGLSSLPSGIFGGLHTLHTFTCKTPHRVLQDDIFCQNQLQWIHRRAFHDLRRLTTLFLF 193
Query: 186 GNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQ 245
N L L L+ L L+GNPW CDC RS WL + + S + C P +
Sbjct: 194 NNSLSELQGDCLAHLGALEFLRLNGNPWSCDCKARSLWEWLHRFRGSSSNVICESPERMH 253
Query: 246 TKHWDDVKAQEF 257
K ++A++F
Sbjct: 254 GKDLKVLRAEDF 265
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 236 (88.1 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 60/217 (27%), Positives = 107/217 (49%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+AN + PS ++D ++ + + G++ ++ L+ + I+ + F
Sbjct: 88 NANSISCPSACTCSNNIVDCRGKGLTEIPANLPE--GIVEIR---LEQNSIKSIPAGAFT 142
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L +D+S NQI+ + D F G L L L GN ITE+ G F L L+ + L
Sbjct: 143 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNA 202
Query: 163 CQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSF 222
+I+ + + L +L L+L N+L+ +S+ +F P ++TL L NP+ CDCHLR
Sbjct: 203 NKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWL 262
Query: 223 RNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++L + + + C+ P L K +K+++F C
Sbjct: 263 ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRC 299
Score = 202 (76.2 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 51/162 (31%), Positives = 80/162 (49%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + F L LKT+ L
Sbjct: 367 FKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLML 426
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V D L+++ L+L NR+ ++ F +L T++L NP+ C+CHL
Sbjct: 427 RSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLA 486
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 487 WLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 528
Score = 185 (70.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 58/192 (30%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CPD CRC+ T+ C + +PS L + L LN+N+IS L FK L N
Sbjct: 319 CPDRCRCEGTIVD----CSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKK--LPN 372
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ H F G LK L L N I+
Sbjct: 373 LRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLIS 432
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 433 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWL 492
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 493 RKRRIVSGNPRC 504
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 42/137 (30%), Positives = 65/137 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C T+ + C + ALP + D+ L L N ++ + KE S L L
Sbjct: 539 CPEQCTCVETVVR----CSNRGLRALPKGIPKDVTELYLEGNHLTAVPKE-LSSFRHLTL 593
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + TF ++ L + LS N++ + +F G L+VL L+GN I+
Sbjct: 594 --IDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISS 651
Query: 144 LRAGQFPKLPYLKTIEL 160
+ G F L L + L
Sbjct: 652 VPEGSFNDLTSLSHLLL 668
Score = 37 (18.1 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIY 87
LNNN IS + +F + + R++
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLH 27
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 224 (83.9 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 62/212 (29%), Positives = 100/212 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L LNNNKI L AF+ G +L+ +YL + + +H + + L + L NQ++
Sbjct: 150 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLS 207
Query: 119 WLHQDTFLGNDRL-KVLYLNGNPITELRAGQFPKLP-YLKTIELQHCQIHSVHKDALIHL 176
+ L R+ + L L+ NP+ + F YL+T+ L + + A +
Sbjct: 208 -SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGV 266
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
T L+ ++L NRL L + FP NL+TL+L NPW C C LR R WL ++K
Sbjct: 267 TTLKHVHLENNRLNQLPST--FPFDNLETLTLTNNPWKCTCQLRGLRRWL-EAKTSRPDA 323
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKES 268
+C+ P + + D A P K++
Sbjct: 324 TCSSPAKFKGQRIRDTDALRSCKSPTKRSKKA 355
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 53/193 (27%), Positives = 81/193 (41%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C L + +C +P ++ ++L+L N L +F+++
Sbjct: 17 PALAACPQNCHCHGDL--QHVICDKVGLQKIPKVSETT-KLLNLQRNNFPVLAANSFRTV 73
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
NL ++L++ IREV F+ L L+ + LS N I L F L LYL+
Sbjct: 74 P--NLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDH 131
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N ++EL G L L ++L + +I + A L L L+ N L L
Sbjct: 132 NKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLD 191
Query: 199 PTPNLKTLSLDGN 211
NL LD N
Sbjct: 192 DVENLAKFHLDRN 204
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 48/151 (31%), Positives = 70/151 (46%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N I L AF L L +YL ++ + E+ R L L + L++N+I
Sbjct: 103 LYLSHNDIRVLRAGAFDD--LTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRE 160
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F G L+ LYL+ N +T L G + L L Q+ S AL L +
Sbjct: 161 LRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVV 220
Query: 180 ESLNLNGNRLKHLSESVFFPTPN-LKTLSLD 209
E L L+ N LK + ++ F L+TL LD
Sbjct: 221 EELKLSHNPLKSIPDNAFQSFGRYLETLWLD 251
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 44/153 (28%), Positives = 69/153 (45%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L + I + AF+ GL L +YL ++ IR + F LT L + L N+++
Sbjct: 79 LHLQHCNIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSE 136
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + L +L LN N I ELRAG F L+ + L + S+H +L + L
Sbjct: 137 LPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENL 196
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+L+ N+L + ++ L L NP
Sbjct: 197 AKFHLDRNQLSSYPSAALSKLRVVEELKLSHNP 229
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 233 (87.1 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 78/254 (30%), Positives = 112/254 (44%)
Query: 16 TGSPDWTDCPDTCRCKW---TLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYL 70
T P T CP C CK LG S C++ N ++ L + L +N N I +
Sbjct: 334 TRVPPLTPCPVPCVCKTHPSDLGL-SVNCQERNIESMAELLPKPLNAKKLHVNGNYIKDV 392
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
F L+L ++L ++ I + + F+ LT L + L+ NQI L + F G
Sbjct: 393 DTADFTEFEGLDL--LHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHN 450
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA-LESLNLNGNRL 189
L+ LYL N I E+ AG F +P L+ + L + + S+ A I A L LNL N
Sbjct: 451 LQYLYLEYNVIKEILAGTFDLMPNLQLLYLNNNLLRSL--PAYIFAGAPLARLNLRNNHF 508
Query: 190 KHLSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQT 246
+L S V +L + L+GNPW C C L + + WL L + L C P
Sbjct: 509 MYLPVSGVLDQLKSLTQIDLEGNPWDCTCDLVALKLWLEKLSEGIVVKELKCETPVQFAN 568
Query: 247 KHWDDVKAQEFACP 260
+K E CP
Sbjct: 569 IELRSLK-NEILCP 581
Score = 187 (70.9 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S+ L+ NN + L F + + + L N+ ++ + F L+ L ++ L++
Sbjct: 59 SNFYHLNFQNNLLIILYPNTF--LNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNN 116
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ L DTFLG + L+ L + N I + G F KL LK + L I S D +
Sbjct: 117 NELKILRADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLI-SFLPDNIF 175
Query: 175 HLTALESLNLNGNRLKHLSE-SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKL 231
+L L++ GNR++ L V + L L+ NPW C C L + WL + +
Sbjct: 176 RFASLTHLDIRGNRIQKLPYIGVLEHIGRIVELQLEDNPWNCTCDLLPLKAWLENMPYNI 235
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQE 256
Y C P L + + QE
Sbjct: 236 YIGEAICETPSDLYGRLLKETNKQE 260
Score = 131 (51.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/153 (27%), Positives = 73/153 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
VL +N K++ K N + +N+ + ++ +TF T V + L +N++
Sbjct: 38 VLYVNCEKVAVYRPNQLKP-PWSNFYHLNFQNNLLIILYPNTFLNFTHAVSLQLGNNKLQ 96
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ FLG LK L+LN N + LRA F + L+ ++ + I S+ + A L
Sbjct: 97 NIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKSIERGAFNKLHK 156
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L LN N + L +++F +L L + GN
Sbjct: 157 LKVLILNDNLISFLPDNIF-RFASLTHLDIRGN 188
>RGD|1561300 [details] [associations]
symbol:Nyx "nyctalopin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] RGD:1561300
GO:GO:0007601 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 KO:K08129 OrthoDB:EOG43JC4W
GeneTree:ENSGT00690000101803 EMBL:CH474009 EMBL:DQ393414
IPI:IPI00858403 RefSeq:NP_001094437.1 UniGene:Rn.153545
Ensembl:ENSRNOT00000013382 GeneID:302516 KEGG:rno:302516
UCSC:RGD:1561300 InParanoid:A1XIQ3 NextBio:649772
Genevestigator:A1XIQ3 Uniprot:A1XIQ3
Length = 476
Score = 228 (85.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 59/165 (35%), Positives = 85/165 (51%)
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
+G+ L+ + L+ + +R VH F L + L+DN +A L F G RL+ L L
Sbjct: 198 LGMRRLRSLSLQANRVRAVHAGAFGDCVALEHLLLNDNLLASLPAAAFRGLRRLRTLNLG 257
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
GN + + G F L L+ + L I V + A +L+ L +L+LNGNRL LS + F
Sbjct: 258 GNALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAF 317
Query: 198 FPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPG 242
P L L L NPW CDCHL R+W+ S + ++C PG
Sbjct: 318 QPGFFLGRLFLFRNPWRCDCHLEWLRDWMEGSGRVAD-VACASPG 361
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 47/189 (24%), Positives = 82/189 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C S C A +P+ + +DL+ N + L + AF + L +L
Sbjct: 26 CPAACTCSNVERGCSVRCDRAGLQRVPTEFPCEAASIDLDRNGLRILGERAFGT--LPSL 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ + L+++ + + FK L L E+ L+ N ++ +LH TF RL+ L L +
Sbjct: 84 RCLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRYLHVRTFAALGRLRRLDLAACRLF 143
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ +LP L+ + V AL L L + +R++ ++ S
Sbjct: 144 SVPERLLAELPALRELTAFDNLFRRV-PGALRGLANLTHAHFERSRIEAVASSSLLGMRR 202
Query: 203 LKTLSLDGN 211
L++LSL N
Sbjct: 203 LRSLSLQAN 211
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 231 (86.4 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 66/240 (27%), Positives = 109/240 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C C C+ + C++ FT + ++ L LN N ++ L F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L N+G++E+ F L L + L++N++ L +DTFLG + L+ L + N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYI 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPT 200
+ + AG F KL LK + L + S+ + + L L+L GNRLK + V
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ + L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 264
Score = 203 (76.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 73/271 (26%), Positives = 119/271 (43%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSAL---CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T SP CP +C C + + L C++ FT + SD+Q + K+ YLT
Sbjct: 332 TKSPVPLTCPSSCVCT-SQSSDNGLNVNCQERKFTNI-----SDLQPKPTSPKKL-YLTG 384
Query: 73 EAFKSI---GLL---NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
+++ LL +L ++L N+ I + F LT L + L+ N + L+ F
Sbjct: 385 NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFD 444
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L+ LYL N I E++ F L L+ + L + + S+ D + TAL LNL
Sbjct: 445 GLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRN 503
Query: 187 NRLKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGM 243
N HL + V P + L NPW C C + ++W S + + ++C P
Sbjct: 504 NHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPA- 562
Query: 244 LQTKHWDDVK---AQEFACPPNVTIKESMVI 271
KH ++ +E CP + + + V+
Sbjct: 563 ---KHAGEILKFLGREAICPDSPNLSDGTVL 590
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 232 (86.7 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 67/244 (27%), Positives = 110/244 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C C C+ + C++ FT + ++ L LN N ++ L F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L N+G++E+ F L L + L++N++ L +DTFLG + L+ L + N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYI 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPT 200
+ + AG F KL LK + L + S+ + + L L+L GNRLK + V
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKLMPFAGVLEHI 205
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ + L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 264
Query: 261 PNVT 264
T
Sbjct: 265 RKST 268
Score = 195 (73.7 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 73/271 (26%), Positives = 116/271 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSAL---CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T SP CP +C C + + L C++ FT + SD+Q + K+ YLT
Sbjct: 332 TKSPVPLTCPSSCVCT-SQSSDNGLNVNCQERKFTNI-----SDLQPKPTSPKKL-YLTG 384
Query: 73 EAFKSI---GLL---NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
+ + LL +L ++L N+ I + F LT L + L+ N + L F
Sbjct: 385 NYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFD 444
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L+ LYL N I E++ F L L+ + L + + S+ D + TAL LNL
Sbjct: 445 GLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRN 503
Query: 187 NRLKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGM 243
N HL + V P + L NPW C C + ++W S + + ++C P
Sbjct: 504 NHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPA- 562
Query: 244 LQTKHWDDVK---AQEFACPPNVTIKESMVI 271
KH ++ +E CP + + V+
Sbjct: 563 ---KHAGEILKFLGREAICPDGPNLSDGTVL 590
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 229 (85.7 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 77/241 (31%), Positives = 114/241 (47%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+VL L+ NPI+ + A + L L+ + L + S+ A LTA L++ N L+
Sbjct: 278 LRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQ 337
Query: 191 HLSESVFFPTPN-LKTLSLDGNPWCCDCHLRSFRNWLLKSKLY----SHPLSCTEPGMLQ 245
L E+ F P+P+ L TL L GNP CDC L WLL+ + + P +C P +Q
Sbjct: 338 TLEETAF-PSPDKLVTLRLSGNPLTCDCRLL----WLLRLRRHLDFGMSPPACAGPHHVQ 392
Query: 246 ---TKHWDDVKAQ-EFACPPNVTIKES--MVIREAGGNVTMSCYVYGDPEPTILWLL-NG 298
K + D+ F C P + K VI E GG+ SC GDP PT+ W+ +G
Sbjct: 393 GKSLKEFSDILPPGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPHG 452
Query: 299 QVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPE 358
L + + E+G L +SV + D G Y C N+ GN S L++ +
Sbjct: 453 AWLGRAG-RVRVLEDG-TLEIRSVQLR-------DRGAYVCVVSNVAGNDSLRTWLEVIQ 503
Query: 359 I 359
+
Sbjct: 504 V 504
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 48/185 (25%), Positives = 75/185 (40%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T ++ LC A+P L D ++LDL+ N++ L + + LL
Sbjct: 31 CPAVCDC--TSQPQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWGLQQGMLSRLSLL-- 86
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L + + + F L L+ + L N++ + F G L +L L N I
Sbjct: 87 QELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVL 146
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
G F +L L+ +E+ + V A L L +L L L + P L
Sbjct: 147 FLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPAL 206
Query: 204 KTLSL 208
L L
Sbjct: 207 VALRL 211
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 45/152 (29%), Positives = 68/152 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q LDL+ N++S L AF GL +L + L+ + +R + F L+ L +DL NQ
Sbjct: 86 LQELDLSYNQLSTLEPGAFH--GLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQ 143
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I F L+ L + N + + G F L L T+ L+ C + +V AL L
Sbjct: 144 IVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARL 203
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
AL +L L + L LK L +
Sbjct: 204 PALVALRLRELDIGRLPAGALRGLGQLKELEI 235
>MGI|MGI:2661375 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031103 "axon
regeneration" evidence=TAS] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046658
"anchored to plasma membrane" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2661375 GO:GO:0016021 GO:GO:0009897
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0045121 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GO:GO:0031103 EMBL:AL603905
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OMA:NCTSHRN OrthoDB:EOG4FXR7G
EMBL:AY250218 EMBL:AK033286 EMBL:AK140456 EMBL:BC030471
EMBL:BK001304 IPI:IPI00169628 RefSeq:NP_808376.1 UniGene:Mm.82661
ProteinModelPortal:Q8K0S5 SMR:Q8K0S5 STRING:Q8K0S5 PRIDE:Q8K0S5
Ensembl:ENSMUST00000102514 GeneID:237847 KEGG:mmu:237847
UCSC:uc007kdh.1 eggNOG:NOG254142 InParanoid:Q8K0S5 NextBio:383518
Bgee:Q8K0S5 CleanEx:MM_RTN4RL1 Genevestigator:Q8K0S5
GermOnline:ENSMUSG00000045287 Uniprot:Q8K0S5
Length = 445
Score = 226 (84.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 67/217 (30%), Positives = 100/217 (46%)
Query: 45 NFTAL-PSTLDSDIQV--LDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
N T + P+T + + + LDL +N+ + L E F+ GL+ L +YL G+ +
Sbjct: 87 NITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGI 144
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F L L + L DN I +L D F+ L L+L+GN + L G F L L + L
Sbjct: 145 FGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLL 204
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
Q+ VH A L L +L L N L L P L+ L L+GN W C C R
Sbjct: 205 HENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNGNAWDCGCRAR 264
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF 257
S WL + + S + C P + Q + ++ ++F
Sbjct: 265 SLWEWLRRFRGSSSAVPCATPELRQGQDLKLLRVEDF 301
Score = 201 (75.8 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 70/220 (31%), Positives = 104/220 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ NF A+P + D + + L NN+I++L + F S ++ L
Sbjct: 25 CPRDCVCY--PAPMTVSCQAHNFAAIPEGIPEDSERIFLQNNRITFLQQGHF-SPAMVTL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
IY N I + +TF+ L E+DL DN Q+ L +TF G +L LYL ++
Sbjct: 82 W-IYSNN--ITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLS 138
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L AG F L L+ + LQ I + D + L L L L+GN+L L + +F N
Sbjct: 139 ALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVN 198
Query: 203 LKTLSLDGNP--WCCDCHLRSFRNWLLKSKLYSHPLSCTE 240
L L L N W H ++F + + L+ S TE
Sbjct: 199 LDRLLLHENQLQWV---HHKAFHDLHRLTTLFLFNNSLTE 235
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 231 (86.4 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 74/253 (29%), Positives = 111/253 (43%)
Query: 16 TGSPDWTDCPDTCRCKW---TLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYL 70
T P T CP C CK LG S C++ N ++ + + L +N N I +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGL-SVNCQEKNIQSMSELIPKPLNAKKLHVNGNSIKDV 392
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
F L+L ++L ++ I + D F LT L + L+ NQI L+ + F G
Sbjct: 393 DVSDFTDFEGLDL--LHLGSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHN 450
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ LYL N I E+ AG F +P L+ + L + + S+ + L LNL N+
Sbjct: 451 LQYLYLEYNLIKEISAGTFDSMPNLQLLYLNNNLLKSLPV-YIFSGAPLARLNLRNNKFM 509
Query: 191 HLSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTK 247
+L S V +L + L+GNPW C C L + + W+ L + L C P
Sbjct: 510 YLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWVEKLSDGIVVKELKCETPVQFANI 569
Query: 248 HWDDVKAQEFACP 260
+K E CP
Sbjct: 570 ELKSLK-NEILCP 581
Score = 196 (74.1 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 58/209 (27%), Positives = 95/209 (45%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S+ L+ NN ++ L F + + ++L N+ ++ + F L+ L ++ L++
Sbjct: 59 SNFYHLNFQNNFLNILYPNTF--LNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNN 116
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ L DTFLG + L+ L + N I + G F KL LK + L I S D +
Sbjct: 117 NELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLI-SFLPDNIF 175
Query: 175 HLTALESLNLNGNRLKHLSE-SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKL 231
+L L++ GNR++ L V + L L+ NPW C C L + WL + +
Sbjct: 176 RFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNI 235
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
Y C P L + + QE CP
Sbjct: 236 YIGEAICETPSDLYGRLLKETNKQEL-CP 263
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
VL +N K+S K N + +N+ + ++ +TF + V + L +N++
Sbjct: 38 VLYVNCEKVSVYRPNQLKP-PWSNFYHLNFQNNFLNILYPNTFLNFSHAVSLHLGNNKLQ 96
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ FLG LK L+LN N + LRA F + L+ ++ + I + + A L
Sbjct: 97 NIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHK 156
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L LN N + L +++F +L L + GN
Sbjct: 157 LKVLILNDNLISFLPDNIF-RFASLTHLDIRGN 188
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 231 (86.4 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 73/244 (29%), Positives = 108/244 (44%)
Query: 24 CPDTCRCKWTLGKKSAL--CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIG 79
CP C CK L L C++ N +L + + L L N I L K +
Sbjct: 329 CPIPCNCK-VLSPSGLLIHCQERNIESLSDLRPPPQNPRKLILAGNIIHSLMKSDL--VE 385
Query: 80 LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN 139
L+ ++L N+ I + +F LT L ++ L+ N + L + FLG L+ LYL N
Sbjct: 386 YFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYN 445
Query: 140 PITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
I E+ G F +P LK + L + + V + L +NL N+ HL S
Sbjct: 446 AIKEILPGTFNPMPKLKVLYLNN-NLLQVLPPHIFSGVPLTKVNLKTNQFTHLPVSNILD 504
Query: 200 TPNLKT-LSLDGNPWCCDCHLRSFRNWLLK-SK-LYSHPLSCTEPGMLQTKHWDDVKAQE 256
+L T + L+ NPW C C L + W+ K SK + + CT PG L K + + E
Sbjct: 505 DLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDDILCTSPGHLDKKELKALNS-E 563
Query: 257 FACP 260
CP
Sbjct: 564 ILCP 567
Score = 190 (71.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 65/242 (26%), Positives = 101/242 (41%)
Query: 24 CPDTCRCKWTLGKKSALC--KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
C C C+ G C K + S S L L NN ++ L F GL
Sbjct: 31 CDSLCNCEEKDGTMLINCEAKGIKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFS--GLT 88
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N I+L + I ++ F L +L ++ ++ N + L +DTF G + L+ L + N I
Sbjct: 89 NAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFI 148
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-T 200
T + F KL LK + L I S+ + + L L+L GN+L+ L F
Sbjct: 149 TVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGFLEHI 207
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L+ N W C+C L + WL + + + C P + +K +E
Sbjct: 208 GRILDLQLEDNKWACNCDLLQLKTWLENMPPQSIIGDVVCNSPPFFKGSILSRLK-KESI 266
Query: 259 CP 260
CP
Sbjct: 267 CP 268
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 231 (86.4 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 66/240 (27%), Positives = 109/240 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C C C+ + C++ FT + ++ L LN N ++ L F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L N+G++E+ F L L + L++N++ L +DTFLG + L+ L + N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYI 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPT 200
+ + AG F KL LK + L + S+ + + L L+L GNRLK + V
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ + L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 264
Score = 203 (76.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 73/271 (26%), Positives = 119/271 (43%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSAL---CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T SP CP +C C + + L C++ FT + SD+Q + K+ YLT
Sbjct: 332 TKSPVPLTCPSSCVCT-SQSSDNGLNVNCQERKFTNI-----SDLQPKPTSPKKL-YLTG 384
Query: 73 EAFKSI---GLL---NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
+++ LL +L ++L N+ I + F LT L + L+ N + L+ F
Sbjct: 385 NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFD 444
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L+ LYL N I E++ F L L+ + L + + S+ D + TAL LNL
Sbjct: 445 GLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRN 503
Query: 187 NRLKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGM 243
N HL + V P + L NPW C C + ++W S + + ++C P
Sbjct: 504 NHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPA- 562
Query: 244 LQTKHWDDVK---AQEFACPPNVTIKESMVI 271
KH ++ +E CP + + + V+
Sbjct: 563 ---KHAGEILKFLGREAICPDSPNLSDGTVL 590
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 231 (86.4 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 66/240 (27%), Positives = 109/240 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C C C+ + C++ FT + ++ L LN N ++ L F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L N+G++E+ F L L + L++N++ L +DTFLG + L+ L + N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYI 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPT 200
+ + AG F KL LK + L + S+ + + L L+L GNRLK + V
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ + L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 264
Score = 200 (75.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 72/271 (26%), Positives = 119/271 (43%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSAL---CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T SP CP +C C + + L C++ FT + SD+Q + K+ YLT
Sbjct: 336 TKSPVPLTCPSSCVCT-SQSSDNGLNVNCQERKFTNI-----SDLQPKPTSPKKL-YLTG 388
Query: 73 EAFKSI---GLL---NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
+++ LL +L ++L N+ I + F LT L + L+ N + L+ F
Sbjct: 389 NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFD 448
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L+ LYL N I E++ F L L+ + L + + S+ D + TAL LNL
Sbjct: 449 GLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRN 507
Query: 187 NRLKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGM 243
N HL + V P + L NPW C C + ++W S + + ++C P
Sbjct: 508 NHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPA- 566
Query: 244 LQTKHWDDVK---AQEFACPPNVTIKESMVI 271
KH ++ +E CP + + + ++
Sbjct: 567 ---KHAGEILKFLGREAICPDSPNLSDGTIL 594
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 232 (86.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 83/323 (25%), Positives = 142/323 (43%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+NN I+ + ++ + L + L + + + ++ L+ L + LS N I+
Sbjct: 288 LHLSNNSIARIHRKGWSFCQ--KLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISH 345
Query: 120 LHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ + F G L+VL L+ N I+ E +G F L L + L +I SV K A L
Sbjct: 346 IAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGL 405
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSH-P 235
LE LNL GN ++ + F NLK L + + + CDC L+ WL+ L +
Sbjct: 406 EGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVT 465
Query: 236 LSCTEPGMLQTKHWDDVKAQEFACP----PNVTIKESMVIREAGGNVTMSCYVYGDPE-P 290
+C P L+ + V + F C P + + + G ++ +C P
Sbjct: 466 ATCAHPESLKGQSIFSVPPESFVCDDFLKPQIITQPETTMAMVGKDIRFTCSAASSSSSP 525
Query: 291 -TILWLLNGQVLHNS---SFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
T W + +VL N+ +F + ++G+ + E + + L VT G Y C N G
Sbjct: 526 MTFAWKKDNEVLTNADMENFVHVHAQDGEVM-EYTTILHLRQVTFGHEGRYQCVITNHFG 584
Query: 347 NA-SGEISLDLPEINLATTLSKT 368
+ S + L +N+ + +KT
Sbjct: 585 STYSHKARLT---VNVLPSFTKT 604
Score = 166 (63.5 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S + VL L N + + + GL L +++L N+ I +HR + + L E+ LS
Sbjct: 259 SKMHVLHLEYNSLVEVNSGSL--YGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSF 316
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD--- 171
N + L +++ L VL L+ N I+ + G F L L+ ++L H +I +D
Sbjct: 317 NNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSG 376
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
A L +L L L GN++K +++ F L+ L+L GN
Sbjct: 377 AFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGN 416
Score = 144 (55.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 56/185 (30%), Positives = 84/185 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIY 87
C T S C ALP L S + L+L+ NK+S + F+ L NLQ +Y
Sbjct: 41 CAAACTCAGDSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFED--LPNLQEVY 98
Query: 88 LKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
L N+ + V + +V + L N+I + L+VL L+ N ITE+R
Sbjct: 99 LNNNELTAVP-SLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNT 157
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLT-ALESLNLNGNRLKHLSESVFFPTPNLKTL 206
FP P +K + L +I ++ A L+ +L +L L+ NR+ L F P L L
Sbjct: 158 CFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAF-KLPRLTQL 216
Query: 207 SLDGN 211
L+ N
Sbjct: 217 DLNRN 221
Score = 139 (54.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 46/159 (28%), Positives = 69/159 (43%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
L + L L+ N+I+ L AFK L L ++ L + IR + TF+ L L + L
Sbjct: 186 LSRSLLTLRLSKNRITQLPVRAFK---LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKL 242
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
N I+ L F G ++ VL+L N + E+ +G L L + L + I +H+
Sbjct: 243 QRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKG 302
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L L+ N L L E +L L L N
Sbjct: 303 WSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHN 341
Score = 126 (49.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDLN N+I + F+ GL +L+ + L+ + I ++ F L+ + + L N +
Sbjct: 216 LDLNRNRIRLIEGLTFQ--GLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVE 273
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
++ + G L L+L+ N I + + L + L + + +++L L++L
Sbjct: 274 VNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSL 333
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+ N + H++E F +L+ L LD N
Sbjct: 334 SVLRLSHNSISHIAEGAFKGLRSLRVLDLDHN 365
Score = 120 (47.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 52/170 (30%), Positives = 80/170 (47%)
Query: 44 ANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK- 102
A F LP+ +Q + LNNN+++ + S +++L +L+++ IR V K
Sbjct: 86 AGFEDLPN-----LQEVYLNNNELTAVPSLGAASSHVVSL---FLQHNKIRSVEGSQLKA 137
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY-LKTIELQ 161
YL++ V +DLS N I + F +K L L GN I L G F L L T+ L
Sbjct: 138 YLSLEV-LDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLS 196
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+I + A L L L+LN NR++ + F +L+ L L N
Sbjct: 197 KNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRN 245
Score = 82 (33.9 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 28/102 (27%), Positives = 45/102 (44%)
Query: 260 PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P ++TI+ + + R + C G P P I W +G + F E + +
Sbjct: 605 PHDITIRTTTMAR-------LECAATGHPNPQIAWQKDG----GTDFPAARERRMHVMPD 653
Query: 320 KSVSITLFNVTDL---DAGEYTCYAENIRGNASGEISLDLPE 358
V F +TD+ DAG Y+C A+N G+ S +L + E
Sbjct: 654 DDV----FFITDVKIDDAGVYSCTAQNSAGSISANATLTVLE 691
Score = 78 (32.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 29/100 (29%), Positives = 42/100 (42%)
Query: 261 PNVTIK-ESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P++ + E V+ G V + C G+P P I W + L L E L
Sbjct: 693 PSLVVPLEDRVV-SVGETVALQCKATGNPPPRITWFKGDRPL-----SLTERHH---LTP 743
Query: 320 KSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISLDLP 357
+ + + NV DAG YTC N G A ++S+ LP
Sbjct: 744 DNQLLVVQNVVAEDAGRYTCEMSNTLGTERAHSQLSV-LP 782
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 233 (87.1 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 60/220 (27%), Positives = 107/220 (48%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+AN + PS ++D ++ + + G++ ++ L+ + I+ + F
Sbjct: 88 NANSISCPSACTCSNNIVDCRGKGLTEIPANLPE--GIVEIR---LEQNSIKSIPAGAFT 142
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L +D+S NQI+ + D F G L L L GN ITE+ G F L L+ + L
Sbjct: 143 QYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNA 202
Query: 163 CQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSF 222
+I+ + + L L L+L N+L+ +S+ +F P ++TL L NP+ CDCHL+
Sbjct: 203 NKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWL 262
Query: 223 RNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
++L + + + C+ P L K +K+++F C N
Sbjct: 263 ADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGN 302
Score = 208 (78.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 50/159 (31%), Positives = 81/159 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 369 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLML 428
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V D + L+++ L+L NR+ ++ F +L T++L NP+ C+CHL
Sbjct: 429 RSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCHLA 488
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ S C +P L+ DV Q+F C
Sbjct: 489 WLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTC 527
Score = 186 (70.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 58/192 (30%), Positives = 87/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CPD CRC+ T+ C + +PS L + L LN+N+IS L FK L N
Sbjct: 321 CPDKCRCEGTIVD----CSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGVFKK--LPN 374
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N I+
Sbjct: 375 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLIS 434
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 435 CVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWL 494
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 495 RKRRIVSGNPRC 506
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C T+ + C + ALP + D+ L L N ++ + +E SI +L
Sbjct: 542 CPEQCTCVETVVR----CSNRGLRALPRGIPKDVTELYLEGNHLTAVPREL--SI-FRHL 594
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + TF ++ L + LS N++ + +F G L+VL L+GN I+
Sbjct: 595 TLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISS 654
Query: 144 LRAGQFPKLPYLKTIELQHCQIH 166
+ G F L L + L +H
Sbjct: 655 VPEGSFNDLTSLSHLALGTNPLH 677
Score = 37 (18.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIY 87
LNNN IS + +F + + R++
Sbjct: 2 LNNNNISRILVTSFNHMPKIRTLRLH 27
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 224 (83.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 67/235 (28%), Positives = 108/235 (45%)
Query: 57 IQVLDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL +N+ + L + F+ GL LQ ++L + + + F+ L L + L +N
Sbjct: 108 LEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQEN 165
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L D F L L+L+GN + L F L L + L ++ VH+ A
Sbjct: 166 SLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRG 225
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
L+ L L L N L L P+L+ L L+ NPW CDC R W ++++ S
Sbjct: 226 LSRLTILYLFNNSLASLPGEALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSD 285
Query: 236 LSCTEPGMLQTKHWDDVKAQEF-ACPPNVTIKESMVIREAGGNVTMSCYVYGDPE 289
++C P Q + ++ +F ACPP + A GN + S ++YG E
Sbjct: 286 VTCATPPERQGRDLRALREADFQACPPAAPTRPGS---RARGN-SSSNHLYGVAE 336
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 68/210 (32%), Positives = 102/210 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C+ NF+++P +L Q L L NN I L F S NL
Sbjct: 31 CPMLCTCYSS--PPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTLRPGTFGS----NL 84
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLNGNPIT 142
++L ++ + ++ TF++L L E+DL DN+ + L DTF G +RL+ L+L ++
Sbjct: 85 LTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLS 144
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L F L L+ + LQ + + D L L L L+GNRL+ L+E VF +
Sbjct: 145 SLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGS 204
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLY 232
L L L GN H +FR + LY
Sbjct: 205 LDRLLLHGNR-LQGVHRAAFRGLSRLTILY 233
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 75/253 (29%), Positives = 110/253 (43%)
Query: 16 TGSPDWTDCPDTCRCKW---TLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYL 70
T P T CP C CK LG S C++ N ++ + L +N N I +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGL-SVNCQEKNIQSMSELIPKPFNAKKLHVNGNSIKDV 392
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
F L+L ++L ++ I + D F LT L + L+ NQI L+ + F G
Sbjct: 393 DISDFAEFEGLDL--LHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHN 450
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ LYL N I E+ AG F +P L+ + L + + S+ + L LNL N+
Sbjct: 451 LQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPV-YIFSGAPLARLNLRNNKFM 509
Query: 191 HLSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTK 247
+L S V +L + L+GNPW C C L + + WL L + L C P
Sbjct: 510 YLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKELRCETPVQFANI 569
Query: 248 HWDDVKAQEFACP 260
+K E CP
Sbjct: 570 ELKSLK-NEILCP 581
Score = 193 (73.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/210 (28%), Positives = 96/210 (45%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIG-LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLS 113
S+ L+ NN ++ L F + ++LQ L N+ ++ + F L+ L ++ L+
Sbjct: 59 SNFYHLNFQNNFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGLSALKQLHLN 115
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+N++ L DTFLG + L+ L + N I + G F KL LK + L I S D +
Sbjct: 116 NNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLI-SFLPDNI 174
Query: 174 IHLTALESLNLNGNRLKHLSE-SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSK 230
+L L++ GNR++ L V + L L+ NPW C C L + WL +
Sbjct: 175 FRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYN 234
Query: 231 LYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+Y C P L + + QE CP
Sbjct: 235 IYIGEAICETPSDLYGRLLKETNKQEL-CP 263
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
VL +N K+S K N + +N+ + ++ +TF + V + L +N++
Sbjct: 38 VLYVNCEKVSVYRPNQLKP-PWSNFYHLNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQ 96
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ FLG LK L+LN N + LRA F + L+ ++ + I + + A L
Sbjct: 97 NIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHK 156
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L LN N + L +++F +L L + GN
Sbjct: 157 LKVLILNDNLISFLPDNIF-RFASLTHLDIRGN 188
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 66/240 (27%), Positives = 109/240 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C C C+ + C++ FT + ++ L LN N ++ L F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L N+G++E+ F L L + L++N++ L +DTFLG + L+ L + N I
Sbjct: 87 NAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYI 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPT 200
+ + AG F KL LK + L + S+ + + L L+L GNRLK + V
Sbjct: 147 STIEAGAFSKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ + L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 264
Score = 209 (78.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 74/271 (27%), Positives = 119/271 (43%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSAL---CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T SP CP +C C + + L C++ FT + SD+Q + K+ YLT
Sbjct: 333 TKSPVALTCPSSCVCT-SQSSDNGLNVNCQERKFTNI-----SDLQPKPTSPKKL-YLTG 385
Query: 73 EAFKSI---GLL---NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
+++ LL +L ++L N+ I + F LT L + L+ N + L+ F
Sbjct: 386 NYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFD 445
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L+ LYL N I E++ F L L+ + L + + S+ D + TAL LNL
Sbjct: 446 GLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRN 504
Query: 187 NRLKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGM 243
N HL + V P + L NPW C C + ++W S + + ++C P
Sbjct: 505 NHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPA- 563
Query: 244 LQTKHWDDVK---AQEFACPPNVTIKESMVI 271
KH ++ +E CP N + + V+
Sbjct: 564 ---KHAGEILKFLGREAICPDNPNLSDGTVL 591
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 66/240 (27%), Positives = 109/240 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C C C+ + C++ FT + ++ L LN N ++ L F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L N+G++E+ F L L + L++N++ L +DTFLG + L+ L + N I
Sbjct: 87 NAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYI 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPT 200
+ + AG F KL LK + L + S+ + + L L+L GNRLK + V
Sbjct: 147 STIEAGAFSKLNKLKVLILNDNLLLSLPSN-VFRFVLLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
+ + L+ NPW C C L + WL ++ + C P L K + Q+ CP
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQLTRQDL-CP 264
Score = 208 (78.3 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 73/271 (26%), Positives = 119/271 (43%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSAL---CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T SP CP +C C + + L C++ FT + SD+Q + K+ YLT
Sbjct: 333 TKSPVALTCPSSCVCT-SQSSDNGLNVNCQERKFTNI-----SDLQPKPTSPKKL-YLTG 385
Query: 73 EAFKSI---GLL---NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
+++ LL +L ++L N+ I + F LT L + L+ N + L+ F
Sbjct: 386 NYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFD 445
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L+ LYL N I E++ F L L+ + L + + S+ D + TAL LNL
Sbjct: 446 GLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSL-PDNIFGGTALTRLNLRN 504
Query: 187 NRLKHLS-ESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGM 243
N HL + V P + L NPW C C + ++W S + + ++C P
Sbjct: 505 NHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPA- 563
Query: 244 LQTKHWDDVK---AQEFACPPNVTIKESMVI 271
KH ++ +E CP N + + ++
Sbjct: 564 ---KHAGEILKFLGREAICPENPNLSDGTIL 591
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 64/213 (30%), Positives = 102/213 (47%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP L S ++ +L LNNNKI L AF+ G +L+ +YL + + +
Sbjct: 138 TELPRGLLSPLVNLFILQLNNNKIRELRSGAFQ--GAKDLRWLYLSENSLSSLQPGALDD 195
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRL-KVLYLNGNPITELRAGQFPKLP-YLKTIELQ 161
+ L + L NQ++ + L R+ + L L+ NP+ + F YL+T+ L
Sbjct: 196 VENLAKFYLDRNQLS-SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLD 254
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRS 221
+ + A + +T L+ ++L NRL L + FP +L+TL+L NPW C C LR
Sbjct: 255 NTNLEKFSDGAFLGVTTLKHVHLENNRLHQLPSN--FPFDSLETLTLTNNPWKCTCQLRG 312
Query: 222 FRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKA 254
R WL ++K +C P + +H D A
Sbjct: 313 LRRWL-EAKTSRPDATCASPAKFRGQHIRDTDA 344
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 57/201 (28%), Positives = 83/201 (41%)
Query: 13 LGTTGS--PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYL 70
LG S P CP C C L + +C +P + ++L+L N L
Sbjct: 12 LGLLASLLPALAACPQNCHCHSDL--QHVICDKVGLQKIPKVSEKT-KLLNLQRNNFPVL 68
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
+F+++ NL ++L++ IREV F+ L L+ + LS N I L F
Sbjct: 69 ATNSFRAMP--NLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTE 126
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L LYL+ N +TEL G L L ++L + +I + A L L L+ N L
Sbjct: 127 LTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLS 186
Query: 191 HLSESVFFPTPNLKTLSLDGN 211
L NL LD N
Sbjct: 187 SLQPGALDDVENLAKFYLDRN 207
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/151 (31%), Positives = 71/151 (47%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N I L AF L L +YL ++ + E+ R L L + L++N+I
Sbjct: 106 LYLSHNDIRVLRAGAFDD--LTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRE 163
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F G L+ LYL+ N ++ L+ G + L L Q+ S AL L +
Sbjct: 164 LRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVV 223
Query: 180 ESLNLNGNRLKHLSESVFFPTPN-LKTLSLD 209
E L L+ N LK + ++ F L+TL LD
Sbjct: 224 EELKLSHNPLKSIPDNAFQSFGRYLETLWLD 254
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 46/168 (27%), Positives = 74/168 (44%)
Query: 45 NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
+F A+P+ + L L + +I + AF+ GL L +YL ++ IR + F L
Sbjct: 72 SFRAMPNLVS-----LHLQHCQIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDL 124
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
T L + L N++ L + L +L LN N I ELR+G F L+ + L
Sbjct: 125 TELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENS 184
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+ S+ AL + L L+ N+L + ++ L L NP
Sbjct: 185 LSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNP 232
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 232 (86.7 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/217 (27%), Positives = 106/217 (48%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+AN + PS ++D ++ + + G++ ++ L+ + I+ + F
Sbjct: 71 NANSISCPSACTCSNNIVDCRGKGLTEIPANLPE--GIVEIR---LEQNSIKSIPAGAFT 125
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L +D+S NQI+ + D F G L L L GN ITEL G F L L+ + L
Sbjct: 126 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNA 185
Query: 163 CQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSF 222
+I+ + + L L L+L N+L+ +S+ +F P ++TL L NP+ CDCHL+
Sbjct: 186 NKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWL 245
Query: 223 RNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++L + + + C+ P L K +K+++F C
Sbjct: 246 ADYLQDNPIETSGARCSSPRRLANKRIGQIKSKKFRC 282
Score = 206 (77.6 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G ++ L L GN + + F L LKT+ L
Sbjct: 350 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLML 409
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I V D L+++ L+L NR+ ++ F +L T++L NP+ C+CHL
Sbjct: 410 RSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLA 469
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV Q+F C N
Sbjct: 470 WLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 511
Score = 188 (71.2 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 58/192 (30%), Positives = 87/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + +PS L + L LN+N+IS L FK L N
Sbjct: 302 CPEKCRCEGTIVD----CSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKK--LPN 355
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+EV F + E+ L+ NQ+ +H F G LK L L N IT
Sbjct: 356 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLIT 415
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L +I ++ A L +L ++NL N +
Sbjct: 416 CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCHLAWLGKWL 475
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 476 RKRRIVSGNPRC 487
Score = 124 (48.7 bits), Expect = 0.00070, P = 0.00070
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C T+ + C + LP + D+ L L N ++ + +E L +L
Sbjct: 522 CPEQCTCLETVVR----CSNRGLHTLPKGIPKDVTELYLEGNHLTAVPRELS---ALRHL 574
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + TF ++ L + LS N++ + F G L+VL L+GN I+
Sbjct: 575 TLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISS 634
Query: 144 LRAGQFPKLPYLKTIELQHCQIH 166
+ G F L L + L +H
Sbjct: 635 VPEGSFSDLTSLSHLALGTNPLH 657
>MGI|MGI:1917780 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:1917780
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 EMBL:CH466559 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:57497
eggNOG:NOG311542 KO:K16355 OMA:HWVAPDD OrthoDB:EOG469QT6
EMBL:AK017594 EMBL:AK044375 EMBL:AK122476 EMBL:BC139418
IPI:IPI00330152 RefSeq:NP_081728.2 UniGene:Mm.133607
ProteinModelPortal:Q80TG9 SMR:Q80TG9 IntAct:Q80TG9 STRING:Q80TG9
PhosphoSite:Q80TG9 PRIDE:Q80TG9 Ensembl:ENSMUST00000046254
GeneID:70530 KEGG:mmu:70530 UCSC:uc008cyd.2 InParanoid:Q80TG9
NextBio:331801 Bgee:Q80TG9 Genevestigator:Q80TG9
GermOnline:ENSMUSG00000040490 Uniprot:Q80TG9
Length = 788
Score = 238 (88.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 84/324 (25%), Positives = 150/324 (46%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N IS++ + F + L +L+ ++L ++ + + DT + L L + +++NQ+
Sbjct: 81 LTLSRNTISHI--QPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGG 138
Query: 120 LHQDTFLGND---RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ D F D L+ L L+ N + L ++ L + L H + + + L
Sbjct: 139 IADDAF--EDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADL 196
Query: 177 TALESLNLNGNRLKHLSESVFFP---------TPNLKTLSLD--GNPWCCDCHLRSFRNW 225
L L+L NRL+ L F TP LS GNP C+C L W
Sbjct: 197 QKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGNPLHCNCELL----W 252
Query: 226 LLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYV 284
L + + +C PG L+ +++ ++ +EF C PP +T ++ G T+ C
Sbjct: 253 LRRLERDDDLETCGSPGSLKGRYFWHIREEEFVCEPPLITQHTHKLLVLEGQAATLKCKA 312
Query: 285 YGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
GDP P I W+ + +++ NSS A+++ ++ + T D+G +TC A N
Sbjct: 313 IGDPSPLIHWVAPDDRLVGNSS--------RTAVYDNG-TLDILITTSQDSGPFTCIAAN 363
Query: 344 IRGNASG--EISL-DLPEINLATT 364
G A+ E+S+ LP ++ +T+
Sbjct: 364 AAGEATATVEVSIVQLPHLSNSTS 387
Score = 156 (60.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 49/190 (25%), Positives = 84/190 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP C C+ LC +P +D L L N I ++ ++ F ++ GL++
Sbjct: 21 CPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMTGLVD 80
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + I + +F L L + L N++ L +DT G L+ L +N N +
Sbjct: 81 LT---LSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLG 137
Query: 143 ELRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F L L+ ++L + +H + D++ + L L+L+ N L H++E F
Sbjct: 138 GIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQ 197
Query: 202 NLKTLSLDGN 211
L L L N
Sbjct: 198 KLARLDLTSN 207
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 490 LPTSTYGNIFISVSVSQEPP-GSDP 513
+ +T N++ + SQ PP G P
Sbjct: 568 MAAATVSNVYSQTNGSQPPPLGGIP 592
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 220 (82.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 62/212 (29%), Positives = 100/212 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L LNNNKI L AF+ G +L+ +YL + + + + + L + L NQ++
Sbjct: 150 ILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLS 207
Query: 119 WLHQDTFLGNDRL-KVLYLNGNPITELRAGQFPKLP-YLKTIELQHCQIHSVHKDALIHL 176
+ L R+ + L L+ NP+ + F YL+T+ L + + A +
Sbjct: 208 -SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGV 266
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
T L+ ++L+ NRL L S FP NL+TL+L NPW C C LR R WL ++K
Sbjct: 267 TTLKHVHLDNNRLNQLPSS--FPFDNLETLTLTNNPWKCTCQLRGLRRWL-EAKASRPDA 323
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKES 268
+C+ P + + D A P K++
Sbjct: 324 TCSSPAKFKGQRIRDTDALRSCKSPTKRSKKA 355
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 53/193 (27%), Positives = 81/193 (41%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C L + +C +P ++ ++L+L N L +F+++
Sbjct: 17 PALAACPQNCHCHGDL--QHVICDKVGLQKIPKVSETT-KLLNLQRNNFPVLAANSFRTM 73
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
NL ++L++ IREV F+ L L+ + LS N I L F L LYL+
Sbjct: 74 P--NLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDH 131
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N ++EL G L L ++L + +I + A L L L+ N L L
Sbjct: 132 NKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLD 191
Query: 199 PTPNLKTLSLDGN 211
NL LD N
Sbjct: 192 DVENLAKFHLDKN 204
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/151 (31%), Positives = 71/151 (47%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N I L AF L L +YL ++ + E+ R L L + L++N+I
Sbjct: 103 LYLSHNDIRVLRAGAFDD--LTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRE 160
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F G L+ LYL+ N ++ L+ G + L L Q+ S AL L +
Sbjct: 161 LRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVV 220
Query: 180 ESLNLNGNRLKHLSESVFFPTPN-LKTLSLD 209
E L L+ N LK + ++ F L+TL LD
Sbjct: 221 EELKLSHNPLKSIPDNAFQSFGRYLETLWLD 251
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 43/153 (28%), Positives = 68/153 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L + I + AF+ GL L +YL ++ IR + F LT L + L N+++
Sbjct: 79 LHLQHCNIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSE 136
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + L +L LN N I ELRAG F L+ + L + S+ +L + L
Sbjct: 137 LPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENL 196
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+L+ N+L + ++ L L NP
Sbjct: 197 AKFHLDKNQLSSYPSAALSKLRVVEELKLSHNP 229
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 220 (82.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 63/213 (29%), Positives = 102/213 (47%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP L S ++ +L LNNNKI L AF+ G +L+ +YL + + +
Sbjct: 136 TELPRGLLSPLVNLFILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGALDD 193
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRL-KVLYLNGNPITELRAGQFPKLP-YLKTIELQ 161
+ L + + NQ++ + L R+ + L L+ NP+ + F YL+T+ L
Sbjct: 194 VENLAKFHVDRNQLS-SYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLD 252
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRS 221
+ + A + +T L+ ++L NRL L + FP +L+TL+L NPW C C LR
Sbjct: 253 NTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPSN--FPFDSLETLALTNNPWKCTCQLRG 310
Query: 222 FRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKA 254
R WL ++K +C P + +H D A
Sbjct: 311 LRRWL-EAKASRPDATCASPAKFKGQHIRDTDA 342
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 53/193 (27%), Positives = 80/193 (41%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C L + +C +P + ++L+L N L +F+++
Sbjct: 18 PALAACPQNCHCHSDL--QHVICDKVGLQKIPKVSEKT-KLLNLQRNNFPVLAANSFRAM 74
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
NL ++L++ IREV F+ L L+ + LS N I L F L LYL+
Sbjct: 75 P--NLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDH 132
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N +TEL G L L ++L + +I + A L L L+ N L L
Sbjct: 133 NKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALD 192
Query: 199 PTPNLKTLSLDGN 211
NL +D N
Sbjct: 193 DVENLAKFHVDRN 205
Score = 138 (53.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/151 (30%), Positives = 71/151 (47%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N I L AF L L +YL ++ + E+ R L L + L++N+I
Sbjct: 104 LYLSHNDIRVLRAGAFDD--LTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRE 161
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F G L+ LYL+ N ++ L+ G + L + Q+ S AL L +
Sbjct: 162 LRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVV 221
Query: 180 ESLNLNGNRLKHLSESVFFPTPN-LKTLSLD 209
E L L+ N LK + ++ F L+TL LD
Sbjct: 222 EELKLSHNPLKSIPDNAFQSFGRYLETLWLD 252
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 46/168 (27%), Positives = 75/168 (44%)
Query: 45 NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
+F A+P+ + L L + +I + AF+ GL L +YL ++ IR + F L
Sbjct: 70 SFRAMPNLVS-----LHLQHCQIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDL 122
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
T L + L N++ L + L +L LN N I ELRAG F L+ + L
Sbjct: 123 TELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENA 182
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+ S+ AL + L +++ N+L + ++ L L NP
Sbjct: 183 LSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNP 230
>UNIPROTKB|E1BEI7 [details] [associations]
symbol:RTN4RL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:DAAA02048667 IPI:IPI00690499 Ensembl:ENSBTAT00000016317
Uniprot:E1BEI7
Length = 446
Score = 223 (83.6 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 67/217 (30%), Positives = 98/217 (45%)
Query: 45 NFTAL-PSTLDSDIQV--LDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
N T + P+T + + LDL +N+ + L E F+ GL+ L +YL G+ +
Sbjct: 87 NITFIDPNTFQGFVHLEELDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGI 144
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F L L + L DN I +L D F+ L L+L+GN + L F L L + L
Sbjct: 145 FGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQDTFRGLVNLDRLLL 204
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
Q+ VH A L L +L L N L L P L+ L L+GN W C C R
Sbjct: 205 HENQLQWVHHKAFHDLRRLTTLFLFNNSLSELPGDCLAPLGALEFLRLNGNAWDCGCRAR 264
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF 257
S WL + + S + C P L + ++A++F
Sbjct: 265 SLWEWLQRFRGSSSAVPCVSPERLHGQDLKLLRAEDF 301
Score = 194 (73.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 72/228 (31%), Positives = 105/228 (46%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P + CP C C + C+ NF A+P + D + + L NN I+ L + F S
Sbjct: 20 PLGSGCPRDCVCY--PAPMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITLLRQGHF-SP 76
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLN 137
++ L IY N I + +TF+ L E+DL DN Q+ L +TF G +L LYL
Sbjct: 77 AMVTLW-IYSNN--ITFIDPNTFQGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLY 133
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
++ L AG F L L+ + LQ I + D + L L L L+GN+L L + F
Sbjct: 134 KCGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQDTF 193
Query: 198 FPTPNLKTLSLDGNP--WCCDCHLRSFRNWLLKSKLYSHPLSCTE-PG 242
NL L L N W H ++F + + L+ S +E PG
Sbjct: 194 RGLVNLDRLLLHENQLQWV---HHKAFHDLRRLTTLFLFNNSLSELPG 238
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 80/280 (28%), Positives = 128/280 (45%)
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
+GL NL+ I ++ + +V + + L +DL+ N I + + F LK L +N
Sbjct: 233 VGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGIN 292
Query: 138 GNP-ITELRAGQFPKLPYLKTIEL-QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
P + + + LP L+ IE + ++ +H +A L LESL LN N L L
Sbjct: 293 NMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHG 352
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKHWDDVK 253
PNLK +S+ NP CDC +R + N + + P L C +P Q ++ V
Sbjct: 353 TIESLPNLKEISIHSNPIRCDCVIR-WMNMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVH 411
Query: 254 AQEFA--CPPNVTIKE--SMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQ-VLHNSSFD 307
++ C P + + S + EAG V+ C +P+P I W+ +GQ +L N+ D
Sbjct: 412 FRDMMEICLPLIAPESFPSNLNVEAGSYVSFHCRATAEPQPEIYWITPSGQKLLPNTLTD 471
Query: 308 -LLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
EG ++ + VT + G YTC A N+ G
Sbjct: 472 KFYVHSEG--------TLDINGVTPKEGGLYTCIATNLVG 503
Score = 143 (55.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/151 (25%), Positives = 73/151 (48%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLH 121
L NK++ L ++ + NLQ +Y+ ++ + + F L L+ + L+ N++ ++
Sbjct: 123 LEENKLTELPEKCLSELS--NLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMIN 180
Query: 122 QDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALES 181
F L++L + NPI ++ F L L+++ + + + +AL+ L LES
Sbjct: 181 SKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLES 240
Query: 182 LNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
++ NRL + NLK L L+ NP
Sbjct: 241 ISFYDNRLIKVPHVALQKVVNLKFLDLNKNP 271
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/197 (23%), Positives = 84/197 (42%)
Query: 23 DCPDTCRCK---WTLGKKSAL------CKDANFTALPSTLDSDIQVLDLNNNKISYLTKE 73
DCP C C+ W + + C D P+ L ++ Q+L L N I+ K
Sbjct: 28 DCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPANTQILLLQTNNIA---KI 84
Query: 74 AFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKV 133
+ + +NL + L + + V K + L+ V L +N++ L + L+
Sbjct: 85 EYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQE 144
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LY+N N ++ + G F L L + L ++ ++ L LE L + N + +
Sbjct: 145 LYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIK 204
Query: 194 ESVFFPTPNLKTLSLDG 210
+ F P NL++L + G
Sbjct: 205 DMNFKPLINLRSLVIAG 221
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N Q + L+ + I ++ T + L +DLS N ++ + +L +YL N +
Sbjct: 70 NTQILLLQTNNIAKIEYST-DFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKL 128
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
TEL +L L+ + + H + ++ A I L L L+LN NRL+ ++ F P
Sbjct: 129 TELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALP 188
Query: 202 NLKTLSLDGNP 212
NL+ L + NP
Sbjct: 189 NLEILMIGENP 199
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 228 (85.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 75/253 (29%), Positives = 110/253 (43%)
Query: 16 TGSPDWTDCPDTCRCKW---TLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYL 70
T P T CP C CK LG S C++ N ++ + L +N N I +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGL-SVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDV 392
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
F L+L ++L ++ I + + F LT L + L+ NQI L+ + F G
Sbjct: 393 DISDFTEFEGLDL--LHLGSNQITAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHN 450
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ LYL N I E+ AG F LP L+ + L + + S+ + L LNL N+
Sbjct: 451 LQYLYLEYNLIKEILAGTFDSLPNLQLLYLNNNLLKSLPV-YIFSGAPLARLNLRNNKFM 509
Query: 191 HLSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTK 247
+L S V +L + L+GNPW C C L + + WL L + L C P
Sbjct: 510 YLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKELKCETPVQFANI 569
Query: 248 HWDDVKAQEFACP 260
+K E CP
Sbjct: 570 ELKSLK-NEILCP 581
Score = 197 (74.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/209 (27%), Positives = 95/209 (45%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S+ L+ NN ++ L F + + ++L N+ ++ + F L+ L ++ L++
Sbjct: 59 SNFYHLNFQNNFLNILYPNTF--VNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNN 116
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ L DTFLG + L+ L + N I + G F KL LK + L I S D +
Sbjct: 117 NELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLI-SFLPDNIF 175
Query: 175 HLTALESLNLNGNRLKHLSE-SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKL 231
+L L++ GNR++ L V + L L+ NPW C C L + WL + +
Sbjct: 176 RFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNI 235
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
Y C P L + + QE CP
Sbjct: 236 YIGEAICETPSDLYGRLLKETNKQEL-CP 263
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
VL +N K+S K N + +N+ + ++ +TF + V + L +N++
Sbjct: 38 VLYVNCEKVSVYRPNQLKP-PWSNFYHLNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQ 96
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ FLG LK L+LN N + LRA F + L+ ++ + I + + A L
Sbjct: 97 NIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHK 156
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L LN N + L +++F +L L + GN
Sbjct: 157 LKVLILNDNLISFLPDNIF-RFASLTHLDIRGN 188
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 227 (85.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 57/198 (28%), Positives = 97/198 (48%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+L+ N++ + A + L +L + L + ++ + F++L L + LS NQ
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L + F G + L+ L L GN + +L L L+ ++L ++ ++H H
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQ 324
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFR----NWLLKSKLY 232
L L+L N L LS +F +P L L LDGN W CDC LR + NW + +L
Sbjct: 325 GRLRELSLRDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGNWHSQGRLL 384
Query: 233 SHPLSCTEPGMLQTKHWD 250
+ + C P L+ K+ D
Sbjct: 385 TVFVQCRHPPALRGKYLD 402
Score = 187 (70.9 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 58/192 (30%), Positives = 91/192 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPST--LDS--DIQVLDLNNNKISYLTKEAFKSIG 79
CP+ C C+ + LC + A+P T L S D+ L N I+ +T F +G
Sbjct: 27 CPERCDCQHP---QHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRLG 83
Query: 80 LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN 139
L+R+ L+ + IR +H TF+ L+ L E+ L +N + L T +L++LY NGN
Sbjct: 84 --QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGN 141
Query: 140 PITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
I L G F L L + L + ++ L L L+L NR++ L ++ F
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQ 201
Query: 200 TPNLKTLSLDGN 211
L+ L+L N
Sbjct: 202 LGKLRFLNLSAN 213
Score = 154 (59.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 58/176 (32%), Positives = 86/176 (48%)
Query: 43 DANFT-ALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIG---LLNLQRIYLKNSGIRE 95
D N ALP + + ++ L L +N+I +L K AF +G LNL L+ S +R
Sbjct: 163 DGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPS-LR- 220
Query: 96 VHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYL 155
H TF L L + LS N + L F RL +L L+GN +T L F L L
Sbjct: 221 -HAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEAL 279
Query: 156 KTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ + L+ +++ + L L +LE+L+L+GN L L + F L+ LSL N
Sbjct: 280 RELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDN 335
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 45 NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
N TA ++ LDL N+I L + F+ + L+ +YL N+ ++ + T L
Sbjct: 73 NITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLS--RLEELYLGNNLLQALVPGTLAPL 130
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
L + + N+I L + +F G + L L L+GN + L F L L + L+ +
Sbjct: 131 RKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNR 190
Query: 165 IHSVHKDALIHLTALESLNLNGNRLK-HLSESV-FFPTPNLKTLSLDGN 211
I + K+A L L LNL+ N L+ L + F P +L TL L N
Sbjct: 191 IRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSAN 239
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 227 (85.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 57/198 (28%), Positives = 97/198 (48%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+L+ N++ + A + L +L + L + ++ + F++L L + LS NQ
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L + F G + L+ L L GN + +L L L+ ++L ++ ++H H
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQ 324
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFR----NWLLKSKLY 232
L L+L N L LS +F +P L L LDGN W CDC LR + NW + +L
Sbjct: 325 GRLRELSLRDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGNWHSQGRLL 384
Query: 233 SHPLSCTEPGMLQTKHWD 250
+ + C P L+ K+ D
Sbjct: 385 TVFVQCRHPPALRGKYLD 402
Score = 188 (71.2 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 58/192 (30%), Positives = 91/192 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPST--LDS--DIQVLDLNNNKISYLTKEAFKSIG 79
CP+ C C+ + LC + A+P T L S D+ L N I+ +T F +G
Sbjct: 27 CPERCDCQHP---QHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNITAFDFHRLG 83
Query: 80 LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN 139
L+R+ L+ + IR +H TF+ L+ L E+ L +N + L T +L++LY NGN
Sbjct: 84 --QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 140 PITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
I L G F L L + L + ++ L L L+L NR++ L ++ F
Sbjct: 142 EIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQ 201
Query: 200 TPNLKTLSLDGN 211
L+ L+L N
Sbjct: 202 LGKLRFLNLSAN 213
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 58/176 (32%), Positives = 85/176 (48%)
Query: 43 DANFT-ALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIG---LLNLQRIYLKNSGIRE 95
D N ALP + + ++ L L N+I +L K AF +G LNL L+ S +R
Sbjct: 163 DGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPS-LR- 220
Query: 96 VHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYL 155
H TF L L + LS N + L F RL +L L+GN +T L F L L
Sbjct: 221 -HAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEAL 279
Query: 156 KTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ + L+ +++ + L L +LE+L+L+GN L L + F L+ LSL N
Sbjct: 280 RELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDN 335
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 45 NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
N TA ++ LDL N+I L + F+ + L+ +YL N+ ++ + T L
Sbjct: 73 NITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLS--RLEELYLGNNLLQALAPGTLAPL 130
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
L + + N+I L + +F G + L L L+GN + L F L L + L+ +
Sbjct: 131 RKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANR 190
Query: 165 IHSVHKDALIHLTALESLNLNGNRLK-HLSESV-FFPTPNLKTLSLDGN 211
I + K+A L L LNL+ N L+ L + F P +L TL L N
Sbjct: 191 IRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSAN 239
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 227 (85.0 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 82/271 (30%), Positives = 120/271 (44%)
Query: 24 CPDTCRCKWTLGKKSAL--CKDANFTALPSTLDSDIQ---VLDLNNNKISYLTKEAFKSI 78
CP C CK L L C++ N +L S L Q L L N I L K +
Sbjct: 329 CPIPCNCK-VLSPSGLLVHCQERNIESL-SDLKPPPQNPRKLVLAGNIIHTLMKSDL--V 384
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+ ++L N+ I + +F LT L ++ L+ N + L + FLG L+ LYL
Sbjct: 385 EYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEY 444
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N + E+ G F +P LK + L + + V + +L +NL N+ HL S
Sbjct: 445 NAVKEILPGTFNPMPKLKVLYLNN-NLLQVLPPHIFSGVSLTRINLKTNQFTHLPVSNIL 503
Query: 199 PTPNLKT-LSLDGNPWCCDCHLRSFRNWLLK-SK-LYSHPLSCTEPGMLQTKHWDDVKA- 254
+L T + L+ NPW C C L + WL K SK + + CT P L K ++KA
Sbjct: 504 DDLDLLTQIDLEDNPWDCSCDLVGLQQWLQKLSKNTVTDDILCTSPEHLDKK---ELKAL 560
Query: 255 -QEFACP-----PNVTIKESMVIREAGGNVT 279
E CP P++ + S +I A T
Sbjct: 561 TSELLCPGLVNNPSLPTQASYIIVSAPTTTT 591
Score = 191 (72.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 64/242 (26%), Positives = 102/242 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
C C C+ G C++ L S S L L NN ++ L F GL
Sbjct: 31 CDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFHLSLLNNGLTMLHTNDFS--GLT 88
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N ++L + I ++ F L +L ++ ++ N + L +DTF G + L+ L + N I
Sbjct: 89 NAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFI 148
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-T 200
T + F KL LK + L I S+ + + L L+L GN+L+ L F
Sbjct: 149 TVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGFLEHI 207
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L+ N W C+C L + WL + + + C P + +K +E
Sbjct: 208 GRILDLQLEDNKWTCNCDLLELKIWLENMPPQSVIGDIVCNSPPFFKGSILSRLK-KESI 266
Query: 259 CP 260
CP
Sbjct: 267 CP 268
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 67/235 (28%), Positives = 107/235 (45%)
Query: 57 IQVLDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL +N+ + L + F+ GL LQ ++L + + + F+ L L + L +N
Sbjct: 108 LEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQEN 165
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L D F L L+L+GN + L F L L + L ++ VH+ A
Sbjct: 166 SLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHG 225
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
L+ L L L N L L P L+ L L+ NPW CDC R W ++++ S
Sbjct: 226 LSRLTILYLFNNSLASLPGEALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSD 285
Query: 236 LSCTEPGMLQTKHWDDVKAQEF-ACPPNVTIKESMVIREAGGNVTMSCYVYGDPE 289
++C P Q + ++ +F ACPP + A GN + S ++YG E
Sbjct: 286 VTCATPPERQGRDLRALRDSDFQACPPPTPTRPGS---RARGN-SSSNHLYGVAE 336
Score = 213 (80.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 63/189 (33%), Positives = 94/189 (49%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C+ NF+++P +L Q L L NN I L F NL
Sbjct: 31 CPMLCTCYSS--PPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGTFGP----NL 84
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLNGNPIT 142
++L ++ + +H TF++L L E+DL DN+ + L DTF G +RL+ L+L ++
Sbjct: 85 LTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLS 144
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L F L L+ + LQ + + D L L L L+GNRL+ L+E VF +
Sbjct: 145 SLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGS 204
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 205 LDRLLLHGN 213
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 67/235 (28%), Positives = 107/235 (45%)
Query: 57 IQVLDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL +N+ + L + F+ GL LQ ++L + + + F+ L L + L +N
Sbjct: 108 LEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQEN 165
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L D F L L+L+GN + L F L L + L ++ VH+ A
Sbjct: 166 SLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHG 225
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
L+ L L L N L L P L+ L L+ NPW CDC R W ++++ S
Sbjct: 226 LSRLTILYLFNNSLASLPGEALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSD 285
Query: 236 LSCTEPGMLQTKHWDDVKAQEF-ACPPNVTIKESMVIREAGGNVTMSCYVYGDPE 289
++C P Q + ++ +F ACPP + A GN + S ++YG E
Sbjct: 286 VTCATPPERQGRDLRTLRDTDFQACPPPTPTRPGS---RARGN-SSSNHLYGVAE 336
Score = 208 (78.3 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 63/194 (32%), Positives = 95/194 (48%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C + + C+ NF+++P +L Q L L NN I L F
Sbjct: 26 PVTPSCPMLCTCYSS--PPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGTFGP- 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLN 137
NL ++L ++ + ++ TF++L L E+DL DN+ + L DTF G +RL+ L+L
Sbjct: 83 ---NLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLY 139
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
++ L F L L+ + LQ + + D L L L L+GNRL+ L+E VF
Sbjct: 140 RCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVF 199
Query: 198 FPTPNLKTLSLDGN 211
+L L L GN
Sbjct: 200 RGLGSLDRLLLHGN 213
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 226 (84.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 65/237 (27%), Positives = 113/237 (47%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
RL+ L L+GN + +R G F L L+ + L H +I + ++A L LE LNL+ N L
Sbjct: 231 RLEELELSGNQLGVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSL 290
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTE----PGMLQ 245
L +F P L+ + L+ NPW C+C + + +W LK + + C PG +
Sbjct: 291 HSLPHDLFTPLQQLERVHLNHNPWVCNCDVL-WLSWWLKETVPDNSTCCARCHAPPGT-K 348
Query: 246 TKHWDDVKAQEFACPPNVTIKESMVIREAGGNVT-MSCYVYGDPEPTILWLL-NGQVLHN 303
++ D+ ++F C V ++ + G + C G ++ WL NG ++ +
Sbjct: 349 GRYIGDLDQRDFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSMTSVNWLTPNGTLMTH 407
Query: 304 SSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISLDLPE 358
++ + L + +++ T NVT D G YTC N GN A+ +++ P+
Sbjct: 408 GAYKV----RISVLHDGTLNFT--NVTMQDTGPYTCMVTNSAGNTTATAVLNVSAPD 458
Score = 179 (68.1 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 60/234 (25%), Positives = 105/234 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + +C + +P ++ S+ + L+L N I + + FK + +L
Sbjct: 58 CPALCSCSNQASR--VICTKKSLNEVPQSISSNTRYLNLQENSIQVIRSDTFKHLN--HL 113
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR++ F L L+ ++L DN++ + F +L+ L+L NPI
Sbjct: 114 EILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIET 173
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIH-LTALESLNLNGNRLKHLSESVFFPTPN 202
L A F ++P L+ ++L + S +A L L LNL LK + P
Sbjct: 174 LPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPNLT--PLVR 231
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQE 256
L+ L L GN SF+ + KL+ L + +++ +DD+K E
Sbjct: 232 LEELELSGNQLGV-VRPGSFQGLVSLRKLW---LMHSRISVIERNAFDDLKNLE 281
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 60 LDLNN-NKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
LDL K+S++++ AF+ GLLNL+ + L G+++V T L L E++LS NQ+
Sbjct: 188 LDLGELRKLSFISEAAFE--GLLNLRFLNLGMCGLKDVPNLT--PLVRLEELELSGNQLG 243
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ +F G L+ L+L + I+ + F L L+ + L H +HS+ D L
Sbjct: 244 VVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQ 303
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
LE ++LN N + V + + LK D + C CH
Sbjct: 304 LERVHLNHNPWV-CNCDVLWLSWWLKETVPDNSTCCARCH 342
>UNIPROTKB|Q9P244 [details] [associations]
symbol:LRFN1 "Leucine-rich repeat and fibronectin type III
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 HSSP:P56276
MEROPS:I43.001 EMBL:AC011445 EMBL:AB040917 EMBL:BC025310
IPI:IPI00793456 RefSeq:NP_065913.1 UniGene:Hs.97860
ProteinModelPortal:Q9P244 SMR:Q9P244 IntAct:Q9P244 STRING:Q9P244
PhosphoSite:Q9P244 DMDM:189028858 PaxDb:Q9P244 PRIDE:Q9P244
Ensembl:ENST00000248668 GeneID:57622 KEGG:hsa:57622 UCSC:uc002okw.2
CTD:57622 GeneCards:GC19M039798 H-InvDB:HIX0015112 HGNC:HGNC:29290
HPA:HPA017383 MIM:612807 neXtProt:NX_Q9P244 PharmGKB:PA134871732
eggNOG:NOG291271 HOGENOM:HOG000237343 HOVERGEN:HBG052352
InParanoid:Q9P244 KO:K16354 OMA:PRVSHVC OrthoDB:EOG4TMR1K
GenomeRNAi:57622 NextBio:64302 Bgee:Q9P244 CleanEx:HS_LRFN1
Genevestigator:Q9P244 Uniprot:Q9P244
Length = 771
Score = 235 (87.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 88/312 (28%), Positives = 138/312 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I + AF L L+ ++L ++ + EV D + L L + L +NQI
Sbjct: 94 LTLSRNTIGQVAAGAFAD--LRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRR 151
Query: 120 LHQ---DTFLGN-DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ D FL + L + Y N + GQ L T+ L H I + + +
Sbjct: 152 VESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNL---NTLTLDHNLIDHIAEGTFVQ 208
Query: 176 LTALESLNLNGNRLKHLSESVFF-------PTPNLK-TLSLDGNPWCCDCHLRSFRNWLL 227
L L L++ NRL L F P P T+S GNP C+C L WL
Sbjct: 209 LHKLVRLDMTSNRLHKLPPDGLFLRSQGTGPKPPTPLTVSFGGNPLHCNCELL----WLR 264
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIK---ESMVIREAGGNVTMSCY 283
+ +C P L +++ + +EF C PP +T + ++V+ G V++ C
Sbjct: 265 RLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVE--GQAVSLRCR 322
Query: 284 VYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAE 342
GDPEP + W+ +G++L NSS + GD + V+IT D+G +TC A
Sbjct: 323 AVGDPEPVVHWVAPDGRLLGNSSRTRVR---GDGTLD--VTITTLR----DSGTFTCIAS 373
Query: 343 NIRGNASGEISL 354
N G A+ + +
Sbjct: 374 NAAGEATAPVEV 385
Score = 151 (58.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 44/189 (23%), Positives = 83/189 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C+ + LC +P +D + L L +N I+ + + F + + +L
Sbjct: 34 CPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFAN--MTSL 91
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L + I +V F L L + L N++A + D G L+ L L N I
Sbjct: 92 VHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHLILGNNQIRR 151
Query: 144 LRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F L ++ ++L + + ++ +A+ + L +L L+ N + H++E F
Sbjct: 152 VESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNLIDHIAEGTFVQLHK 211
Query: 203 LKTLSLDGN 211
L L + N
Sbjct: 212 LVRLDMTSN 220
Score = 37 (18.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 544 PRRPRSKVIEP 554
PRR RS +EP
Sbjct: 669 PRRSRSGALEP 679
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 223 (83.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 74/240 (30%), Positives = 109/240 (45%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L++L L+ NPI+ + A + L L+ + L + S+ A LTA L++ N L+
Sbjct: 278 LRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQ 337
Query: 191 HLSESVFFPTPN-LKTLSLDGNPWCCDCHLRSFRNWLLKSK----LYSHPLSCTEPGMLQ 245
L E+ F P+P+ L TL L GNP CDC L WLL+ + + P +C P +Q
Sbjct: 338 TLEETAF-PSPDKLVTLRLSGNPLTCDCRLL----WLLRLRRRLDFGTSPPACAGPQHVQ 392
Query: 246 TK---HWDDVKAQ-EFACPPNVTIKES--MVIREAGGNVTMSCYVYGDPEPTILWLLNGQ 299
K + D+ F C P + K VI E GG+ SC GDP PT+ W+ Q
Sbjct: 393 GKSLREFSDILPPGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWM-RPQ 451
Query: 300 VLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEI 359
+ E L +SV + D G Y C N+ GN S L++ ++
Sbjct: 452 GAWLGRVGRVRVLEDGTLEIRSVQLR-------DRGAYVCVVSNVAGNDSLRTWLEVIQV 504
Score = 137 (53.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 48/152 (31%), Positives = 69/152 (45%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q LDL+ N++S L AF GL +L + L+ + +R V F LT L +DL NQ
Sbjct: 86 LQELDLSYNQLSTLEPGAFH--GLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQ 143
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I F L+ L + N + + G F L L TI L+ C + +V AL L
Sbjct: 144 IVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQL 203
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
AL +L L ++ L LK L +
Sbjct: 204 PALVALRLRELDIERLPAGALRGLGQLKELEI 235
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 45/187 (24%), Positives = 74/187 (39%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
+ CP C C T ++ C +P L D ++LDL+ N++ L + +G
Sbjct: 29 SSCPTVCDC--TSQTRAVFCAHRRLDTIPGGLPLDTELLDLSGNRLWGLQRGMLSRLG-- 84
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
LQ + L + + + F L L+ + L N++ + F G L +L L N I
Sbjct: 85 QLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQI 144
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
G F +L L+ +E+ + V A L L ++ L L + P
Sbjct: 145 VLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLP 204
Query: 202 NLKTLSL 208
L L L
Sbjct: 205 ALVALRL 211
>UNIPROTKB|Q9NR99 [details] [associations]
symbol:MXRA5 "Matrix-remodeling-associated protein 5"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:Q9BZR6 eggNOG:NOG239806 EMBL:AF245505 EMBL:AC004616
EMBL:BC011846 EMBL:BC064986 EMBL:BC080586 EMBL:AL049946
IPI:IPI00012347 PIR:T08678 RefSeq:NP_056234.2 UniGene:Hs.369422
ProteinModelPortal:Q9NR99 STRING:Q9NR99 PhosphoSite:Q9NR99
DMDM:117949607 PaxDb:Q9NR99 PRIDE:Q9NR99 Ensembl:ENST00000217939
Ensembl:ENST00000381114 GeneID:25878 KEGG:hsa:25878 UCSC:uc004crg.4
CTD:25878 GeneCards:GC0XM003220 H-InvDB:HIX0016637 HGNC:HGNC:7539
HPA:HPA000508 neXtProt:NX_Q9NR99 PharmGKB:PA31340
HOGENOM:HOG000168306 InParanoid:Q9NR99 OMA:GALMTPN
OrthoDB:EOG4B5P48 PhylomeDB:Q9NR99 GenomeRNAi:25878 NextBio:47288
Bgee:Q9NR99 CleanEx:HS_MXRA5 Genevestigator:Q9NR99
GermOnline:ENSG00000101825 Uniprot:Q9NR99
Length = 2828
Score = 183 (69.5 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C C + ++P+ + ++ ++L N I L++ +F GL L
Sbjct: 27 CPHPCAC---YVPSEVHCTFRSLASVPAGIAKHVERINLGFNSIQALSETSFA--GLTKL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + + + I + + L+ L S N++ + T G L L+++ N I
Sbjct: 82 ELLMIHGNEIPSIPDGALRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDHNKIEF 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF--FPT- 200
+ F L L+ + L+ +H +H T L+ L+ R +L+E++ P
Sbjct: 142 IHPQAFNGLTSLRLLHLEGNLLHQLHPSTFSTFTFLDYFRLSTIRHLYLAENMVRTLPAS 201
Query: 201 -----PNLKTLSLDGNPWCCDCHLRSFRNWLLKSK 230
P L+ L L GNPW CDC +R F W KS+
Sbjct: 202 MLRNMPLLENLYLQGNPWTCDCEMRWFLEWDAKSR 236
Score = 104 (41.7 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 258 ACPPNVTIKESMVIREAGGN-VTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDA 316
A PP +T + + VI GN V ++C G P+ I W L + H + + G+
Sbjct: 2730 AYPPRITSEPTPVIYTRPGNTVKLNCMAMGIPKADITWELPDKS-HLKA-GVQARLYGNR 2787
Query: 317 LFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
S+T+ + T DAG Y C A+NI G+ S
Sbjct: 2788 FLHPQGSLTIQHATQRDAGFYKCMAKNILGSDS 2820
Score = 102 (41.0 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
GG + + C GDP P ILW L + + ++ F + +F ++ + +VTD DA
Sbjct: 2161 GGTLKLDCSASGDPWPRILWRLPSKRMIDALFSF---DSRIKVFANG-TLVVKSVTDKDA 2216
Query: 335 GEYTCYAENIRGNASGEISLDL 356
G+Y C A N G+ + +D+
Sbjct: 2217 GDYLCVARNKVGDDYVVLKVDV 2238
Score = 99 (39.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 274 AGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSIT-LFNVTDL 332
AG ++++C G P P+++W VL N + DL ++ + K+ + + ++ +
Sbjct: 2556 AGHTISLNCSAAGTPTPSLVW-----VLPNGT-DLQSGQQLQRFYHKADGMLHISGLSSV 2609
Query: 333 DAGEYTCYAENIRGNASGEISLDL---PEIN 360
DAG Y C A N G+ +SL + PE N
Sbjct: 2610 DAGAYRCVARNAAGHTERLVSLKVGLKPEAN 2640
Score = 85 (35.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 252 VKAQEFACPPNVTIKESMVIREAGGNV-TMSCYVYGDPEPTILWLL-NGQVLHNSSFDLL 309
V+ + P + K + ++ G+V T++C G+P P + WL +V+ SS
Sbjct: 2337 VRVKVVTAPATIRNKTYLAVQVPYGDVVTVACEAKGEPMPKVTWLSPTNKVIPTSSEKYQ 2396
Query: 310 EEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
++G L +K+ D+G YTC N G
Sbjct: 2397 IYQDGTLLIQKAQRS--------DSGNYTCLVRNSAG 2425
Score = 84 (34.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSI---TL-FNVT 330
GG++ + C G P P I W L L NS ++ ++ ++ V TL FN
Sbjct: 2258 GGDLKVDCVATGLPNPEISWSLPDGSLVNS---FMQSDDSGGRTKRYVVFNNGTLYFNEV 2314
Query: 331 DL-DAGEYTCYAEN 343
+ + G+YTC+AEN
Sbjct: 2315 GMREEGDYTCFAEN 2328
Score = 77 (32.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 258 ACPPNVTIKESM--VIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEG 314
A PP V +E + + G ++ + C P P++ W+L +G + S F G
Sbjct: 2044 ALPP-VIHQEKLENISLPPGLSIHIHCTAKAAPLPSVRWVLGDGTQIRPSQF-----LHG 2097
Query: 315 DALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
+ + ++ + N+ D+G Y C A N+ G+A + L++
Sbjct: 2098 NLFVFPNGTLYIRNLAPKDSGRYECVAANLVGSARRTVQLNV 2139
Score = 74 (31.1 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 275 GGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDA 334
G + M C G P P I W+ + + + + EG ++ ++++ + D
Sbjct: 1965 GDTIAMECLAKGTPAPQISWIFPDRRV----WQTVSPVEGRITLHENRTLSIKEASFSDR 2020
Query: 335 GEYTCYAENIRGNASGEISL 354
G Y C A N G S I L
Sbjct: 2021 GVYKCVASNAAGADSLAIRL 2040
Score = 73 (30.8 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 266 KESMVI-REAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSI 324
K+++ I + G +VT+ C PE + W+L + + N DL L ++SI
Sbjct: 582 KDTVTIGKNPGESVTLPCNALAIPEAHLSWILPNRRIIN---DLANTSHVYMLPNGTLSI 638
Query: 325 TLFNVTDLDAGEYTCYAENIRG 346
V+D +G Y C A N +G
Sbjct: 639 PKVQVSD--SGYYRCVAVNQQG 658
Score = 67 (28.6 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 261 PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFE 319
P+ ++ + E GG +SC V P+I W+L +G +L +++ +
Sbjct: 481 PSGAVQRDQTVLE-GGPCQLSCNVKASESPSIFWVLPDGSILKAP----MDDPDSKFSIL 535
Query: 320 KSVSITLFNVTDLDAGEYTCYAE 342
S + + ++ D+G Y C A+
Sbjct: 536 SSGWLRIKSMEPSDSGLYQCIAQ 558
Score = 60 (26.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 22/89 (24%), Positives = 36/89 (40%)
Query: 261 PNVTIKESMVIR-EAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P + K + A + C G P+P + W +V S+ L+ FE
Sbjct: 1853 PQILTKSPQTVSVTAETDTVFPCEATGKPKPFVTWT---KV---STGALMTPNTRIQRFE 1906
Query: 320 --KSVSITLFNVTDLDAGEYTCYAENIRG 346
K+ ++ + V D G+Y C A N+ G
Sbjct: 1907 VLKNGTLVIRKVQVQDRGQYMCTASNLHG 1935
Score = 54 (24.1 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 22/89 (24%), Positives = 34/89 (38%)
Query: 261 PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFE 319
P T++E I G + C G P P +LW G VL + G+
Sbjct: 2448 PITTVRE---IAAGGSRKLIDCKAEGIPTPRVLWAFPEGVVLPAPYYGNRITVHGNG--- 2501
Query: 320 KSVSITLFNVTDLDAGEYTCYAENIRGNA 348
S+ + ++ D+ + C A N G A
Sbjct: 2502 ---SLDIRSLRKSDSVQLVCMARNEGGEA 2527
Score = 37 (18.1 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 416 VSFNDQEKKLLDVSITTTDRHTGSCEALGSQPDMELIEQ 454
V+ N Q V IT T + +G G +P + + +
Sbjct: 652 VAVNQQGADHFTVGITVTKKGSGLPSKRGRRPGAKALSR 690
Score = 37 (18.1 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 15/61 (24%), Positives = 18/61 (29%)
Query: 335 GEYTCYAENIRGNASGEISLDLPEINLATTLSKTDSWYMLVLGXXXXXXXXXXXXGMSFC 394
GE N +S LP + L+ T YML G G C
Sbjct: 592 GESVTLPCNALAIPEAHLSWILPNRRIINDLANTSHVYMLPNGTLSIPKVQVSDSGYYRC 651
Query: 395 V 395
V
Sbjct: 652 V 652
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 223 (83.6 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 80/342 (23%), Positives = 157/342 (45%)
Query: 43 DANFTALPS-TLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ + S ++ L L NN I + AF + +L+R+ L + +
Sbjct: 134 DNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRLSYISE 191
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L + + + RL L ++GN ++ +R G F L +L+ +
Sbjct: 192 GAFEGLSNLRYLNLGMCNLKEI--PNLIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKL 249
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ H QI ++ ++A L +L LNL N L L +F P +L+ + L NPW C+C
Sbjct: 250 WMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHNPWNCNCD 309
Query: 219 LRSFRNWLLKSKLYSHP---LSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W LK + ++ C+ P + ++ ++ F C V ++ +
Sbjct: 310 IL-WLSWWLKEMVPANTSCCARCSSPTSHKGRYIGELDQNYFHCYAPVIVEPPADLNVTE 368
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C + ++ W+ NG ++ + ++ + L + +++ T NVT D
Sbjct: 369 GMAAELKCRA--NSLTSVSWITPNGSIMTHGAYKI----RISVLNDGTLNFT--NVTMQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATTLSKTDSWYMLV 375
G YTC N GN + +L N+++T + + S++ V
Sbjct: 421 TGTYTCMVSNSAGNTTASATL-----NVSSTENSSFSYFTTV 457
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 49/189 (25%), Positives = 86/189 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C +P + ++ + L+L N I + ++FK L +L
Sbjct: 48 CPSVCSCSNQFSK--VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKH--LRHL 103
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F +LK L+L NPI
Sbjct: 104 EILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIES 163
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL LK + + P
Sbjct: 164 IPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLI--PLVR 221
Query: 203 LKTLSLDGN 211
L L + GN
Sbjct: 222 LDELEMSGN 230
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 227 (85.0 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 57/177 (32%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 109 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 168
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F P
Sbjct: 169 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 228
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 229 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 285
Score = 189 (71.6 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 46/159 (28%), Positives = 81/159 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++ S+N+I + + F G + + L N + ++ F L LKT+ L
Sbjct: 361 FKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLML 420
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ +I V D+ I L+++ L+L N++ ++ F +L TL+L NP+ C+C+L
Sbjct: 421 RSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLA 480
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ + C +P L+ DV Q+F C
Sbjct: 481 WLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 519
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/192 (26%), Positives = 83/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + T +P + L LNNN+ + L FK L
Sbjct: 313 CPEKCRCEGT----TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 366
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I N+ I ++ F+ + E+ L+ N++ + F G + LK L L N I+
Sbjct: 367 LRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 426
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L +L +LNL N +
Sbjct: 427 CVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWL 486
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 487 RKKRIVTGNPRC 498
Score = 135 (52.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
+ E+ L N + ++ + L ++ L+ N I+ L F + L T+ L + ++
Sbjct: 563 VTELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 621
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
+ L +L L+L+GN + + E F L L++ NP CDC+++ +W+
Sbjct: 622 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWV 681
Query: 227 LKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFACPPNVTI 265
KS+ Y P C PG + K +++F C V I
Sbjct: 682 -KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDI 720
Score = 127 (49.8 bits), Expect = 0.00034, P = 0.00034
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T+ + C + LP + D+ L L+ N + + KE + +L
Sbjct: 534 CPTECTCLDTVVR----CSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYN---YKHL 586
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
I L N+ I + +F +T L+ + LS N++ + TF G L++L L+GN I+
Sbjct: 587 TLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISV 646
Query: 144 LRAGQFPKLPYLKTIEL 160
+ G F L L + +
Sbjct: 647 VPEGAFSDLSALSHLAI 663
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/119 (31%), Positives = 53/119 (44%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N T L A G F KLP L+ I + +I + + A + + L NRL+++
Sbjct: 345 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENV 404
Query: 193 SESVFFPTPNLKTLSLDGNPWCC---DCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKH 248
+F +LKTL L N C D + LL LY + ++ PG T H
Sbjct: 405 QHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLS--LYDNQIATIAPGAFDTLH 461
Score = 84 (34.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP +L +Q+L LN NKI+ L +AF+ + LNL +Y ++ ++ + + TF
Sbjct: 168 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY--DNKLQTIAKGTFSP 225
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVL--YLNGNPI 141
L + Q L Q+ F+ + LK L YL+ NPI
Sbjct: 226 LRAI--------QTMHLAQNPFICDCHLKWLADYLHTNPI 257
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 220 (82.5 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 66/225 (29%), Positives = 102/225 (45%)
Query: 18 SPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNN-KISYLTKEAFK 76
S +T C + W +L + F L + ++ LDL++N + + F+
Sbjct: 74 STSFTSCRNMT-ILWIHSNNISLIEPGAFYGL-----NKLEELDLSDNTNLKSINPVTFR 127
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
GL++L ++L G+ E+ F+ L L + L DN + L DTF+ L L+L
Sbjct: 128 --GLVHLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFL 185
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESV 196
+GN I L F L L + L ++ VH+ + L + +L L N L L+
Sbjct: 186 HGNKIKSLSENVFRGLINLDRLLLHQNRVSLVHRRSFHDLGKVMTLYLFNNNLTVLTGET 245
Query: 197 FFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEP 241
P +L+ L L+GN W CDC RS NW + K S L C P
Sbjct: 246 MAPLVSLQYLRLNGNQWICDCQARSLWNWFKQFKGSSSELECHLP 290
Score = 212 (79.7 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 65/202 (32%), Positives = 101/202 (50%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C ++ K + C+ TA+P+ + Q + L+NNKI+ + +F S N+
Sbjct: 27 CPGACVC-YSEPKITISCQQQGLTAIPTEIPIQSQRIFLHNNKITLVRSTSFTSCR--NM 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+++ ++ I + F L L E+DLSDN + ++ TF G L L+L+ +
Sbjct: 84 TILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGLVHLHTLHLDRCGLM 143
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + LQ + ++ D I L L L L+GN++K LSE+VF N
Sbjct: 144 ELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGLIN 203
Query: 203 LKTLSLDGNPWCCDCHLRSFRN 224
L L L N H RSF +
Sbjct: 204 LDRLLLHQNRVSL-VHRRSFHD 224
>UNIPROTKB|F1RP64 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:CU076063 RefSeq:XP_001927677.3
Ensembl:ENSSSCT00000010400 GeneID:100152470 KEGG:ssc:100152470
Uniprot:F1RP64
Length = 695
Score = 223 (83.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 67/248 (27%), Positives = 114/248 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C G C+ FT+L + S L L+ N ++ L F + N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANF--YNAVS 86
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++++N+G+ E+ F L ++ + +++N+I + TFLG D L+ L + N + ++
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDID 146
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
G F L L+ + L I ++ + ++ + L+L GNRLK L E V P +
Sbjct: 147 PGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPGIA 205
Query: 205 TLSLDGNPWCCDCHLRSFRNWLL---KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPP 261
+ L+ NPW C C L S + WL K+ L + C P LQ K ++ Q+ CP
Sbjct: 206 EILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVV-CEAPTRLQGKDLNETTEQDL-CPL 263
Query: 262 NVTIKESM 269
+ S+
Sbjct: 264 KNRVDSSL 271
Score = 206 (77.6 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 73/266 (27%), Positives = 118/266 (44%)
Query: 24 CPDTCRCKWTLGKKSAL-CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGL 80
CP C C G + C + N ++L S++Q L L +NKI + K F +
Sbjct: 340 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 397
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
NL + L N+ I V +TFK L L + + N + L ++ F G L+ L + N
Sbjct: 398 KNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 457
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES-VFFP 199
I + G F +P L+ + L + + S+ D ++ L L+L+ N +L + V
Sbjct: 458 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQ 516
Query: 200 TPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHW-----DDV 252
++ + L GNPW C C + F+ W L S++ L C P K + D++
Sbjct: 517 LTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDEI 576
Query: 253 KAQEFA-CPPNVTI--KESMVIREAG 275
Q +A P +T K S + E G
Sbjct: 577 CPQLYARISPTLTSHSKNSTGLAETG 602
>MGI|MGI:2679446 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007399 "nervous system development" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0030534 "adult behavior" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042592
"homeostatic process" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2679446 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GO:GO:0030534 GO:GO:0035264 InterPro:IPR000372 SMART:SM00013
GO:GO:0042592 CTD:114798 eggNOG:NOG236179 HOVERGEN:HBG056407
OMA:NGLPCPG OrthoDB:EOG428211 EMBL:AB097570 EMBL:AK014285
IPI:IPI00110451 RefSeq:NP_951020.1 UniGene:Mm.257268
ProteinModelPortal:Q810C1 SMR:Q810C1 STRING:Q810C1
PhosphoSite:Q810C1 PaxDb:Q810C1 PRIDE:Q810C1
Ensembl:ENSMUST00000100322 GeneID:76965 KEGG:mmu:76965
GeneTree:ENSGT00680000099775 InParanoid:Q810C1 ChiTaRS:SLITRK1
NextBio:346195 Bgee:Q810C1 CleanEx:MM_SLITRK1 Genevestigator:Q810C1
GermOnline:ENSMUSG00000075478 Uniprot:Q810C1
Length = 696
Score = 223 (83.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 67/248 (27%), Positives = 114/248 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C G C+ FT+L + S L L+ N ++ L F + N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANF--YNAVS 86
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++++N+G+ E+ F L ++ + +++N+I + TFLG D L+ L + N + ++
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDID 146
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
G F L L+ + L I ++ + ++ + L+L GNRLK L E V P +
Sbjct: 147 PGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPGIA 205
Query: 205 TLSLDGNPWCCDCHLRSFRNWLL---KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPP 261
+ L+ NPW C C L S + WL K+ L + C P LQ K ++ Q+ CP
Sbjct: 206 EILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVV-CEAPTRLQGKDLNETTEQDL-CPL 263
Query: 262 NVTIKESM 269
+ S+
Sbjct: 264 KNRVDSSL 271
Score = 207 (77.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 66/243 (27%), Positives = 109/243 (44%)
Query: 24 CPDTCRCKWTLGKKSAL-CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGL 80
CP C C G + C + N ++L S++Q L L +NKI + K F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 398
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
NL + L N+ I + +TFK L L + + N + L ++ F G L+ L + N
Sbjct: 399 KNLILLDLGNNNIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES-VFFP 199
I + G F +P L+ + L + + S+ D ++ L L+L+ N +L + V
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQ 517
Query: 200 TPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF 257
++ + L GNPW C C + F+ W L S++ L C P K + + +E
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNEEI 577
Query: 258 ACP 260
CP
Sbjct: 578 -CP 579
>UNIPROTKB|F1MJJ9 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:DAAA02033738 IPI:IPI00709451
RefSeq:XP_002691955.1 RefSeq:XP_003582925.1 RefSeq:XP_003586770.1
RefSeq:XP_872893.3 Ensembl:ENSBTAT00000054494 GeneID:615880
KEGG:bta:615880 NextBio:20899841 Uniprot:F1MJJ9
Length = 696
Score = 223 (83.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 67/248 (27%), Positives = 114/248 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C G C+ FT+L + S L L+ N ++ L F + N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANF--YNAVS 86
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++++N+G+ E+ F L ++ + +++N+I + TFLG D L+ L + N + ++
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDID 146
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
G F L L+ + L I ++ + ++ + L+L GNRLK L E V P +
Sbjct: 147 PGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPGIA 205
Query: 205 TLSLDGNPWCCDCHLRSFRNWLL---KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPP 261
+ L+ NPW C C L S + WL K+ L + C P LQ K ++ Q+ CP
Sbjct: 206 EILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVV-CEAPTRLQGKDLNETTEQDL-CPL 263
Query: 262 NVTIKESM 269
+ S+
Sbjct: 264 KHRVDSSL 271
Score = 206 (77.6 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 73/266 (27%), Positives = 118/266 (44%)
Query: 24 CPDTCRCKWTLGKKSAL-CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGL 80
CP C C G + C + N ++L S++Q L L +NKI + K F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 398
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
NL + L N+ I V +TFK L L + + N + L ++ F G L+ L + N
Sbjct: 399 KNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES-VFFP 199
I + G F +P L+ + L + + S+ D ++ L L+L+ N +L + V
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQ 517
Query: 200 TPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHW-----DDV 252
++ + L GNPW C C + F+ W L S++ L C P K + D++
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDEI 577
Query: 253 KAQEFA-CPPNVTI--KESMVIREAG 275
Q +A P +T K S + E G
Sbjct: 578 CPQLYARISPTLTSHSKNSTGLAETG 603
>UNIPROTKB|Q96PX8 [details] [associations]
symbol:SLITRK1 "SLIT and NTRK-like protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 MIM:137580 Orphanet:856
EMBL:AB067497 EMBL:AY358289 EMBL:AL355481 EMBL:BC051738
IPI:IPI00102543 RefSeq:NP_443142.1 UniGene:Hs.415478
ProteinModelPortal:Q96PX8 SMR:Q96PX8 STRING:Q96PX8
PhosphoSite:Q96PX8 DMDM:46396997 PaxDb:Q96PX8 PeptideAtlas:Q96PX8
PRIDE:Q96PX8 Ensembl:ENST00000377084 GeneID:114798 KEGG:hsa:114798
UCSC:uc001vlk.3 CTD:114798 GeneCards:GC13M084451 HGNC:HGNC:20297
HPA:HPA012414 MIM:609678 MIM:613229 neXtProt:NX_Q96PX8
PharmGKB:PA134944423 eggNOG:NOG236179 HOGENOM:HOG000290667
HOVERGEN:HBG056407 InParanoid:Q96PX8 OMA:NGLPCPG OrthoDB:EOG428211
PhylomeDB:Q96PX8 GenomeRNAi:114798 NextBio:79234 Bgee:Q96PX8
CleanEx:HS_SLITRK1 Genevestigator:Q96PX8 GermOnline:ENSG00000178235
Uniprot:Q96PX8
Length = 696
Score = 223 (83.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 67/248 (27%), Positives = 114/248 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C G C+ FT+L + S L L+ N ++ L F + N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANF--YNAVS 86
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++++N+G+ E+ F L ++ + +++N+I + TFLG D L+ L + N + ++
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDID 146
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
G F L L+ + L I ++ + ++ + L+L GNRLK L E V P +
Sbjct: 147 PGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPGIA 205
Query: 205 TLSLDGNPWCCDCHLRSFRNWLL---KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPP 261
+ L+ NPW C C L S + WL K+ L + C P LQ K ++ Q+ CP
Sbjct: 206 EILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVV-CEAPTRLQGKDLNETTEQDL-CPL 263
Query: 262 NVTIKESM 269
+ S+
Sbjct: 264 KNRVDSSL 271
Score = 206 (77.6 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 73/266 (27%), Positives = 118/266 (44%)
Query: 24 CPDTCRCKWTLGKKSAL-CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGL 80
CP C C G + C + N ++L S++Q L L +NKI + K F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRKSHF--VDY 398
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
NL + L N+ I V +TFK L L + + N + L ++ F G L+ L + N
Sbjct: 399 KNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES-VFFP 199
I + G F +P L+ + L + + S+ D ++ L L+L+ N +L + V
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQ 517
Query: 200 TPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHW-----DDV 252
++ + L GNPW C C + F+ W L S++ L C P K + D++
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDEI 577
Query: 253 KAQEFA-CPPNVTI--KESMVIREAG 275
Q +A P +T K S + E G
Sbjct: 578 CPQLYARISPTLTSHSKNSTGLAETG 603
>RGD|1308858 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10116 "Rattus norvegicus" [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=ISO]
[GO:0035264 "multicellular organism growth" evidence=ISO]
[GO:0042592 "homeostatic process" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1308858 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH473951 CTD:114798
OMA:NGLPCPG OrthoDB:EOG428211 GeneTree:ENSGT00680000099775
IPI:IPI00373549 RefSeq:NP_001100753.1 UniGene:Rn.31034
Ensembl:ENSRNOT00000012195 GeneID:306147 KEGG:rno:306147
UCSC:RGD:1308858 NextBio:655550 Uniprot:D3Z8D8
Length = 696
Score = 223 (83.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 67/248 (27%), Positives = 114/248 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C G C+ FT+L + S L L+ N ++ L F + N
Sbjct: 29 CSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQFYHLFLHGNSLTRLFPNEFANF--YNAVS 86
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++++N+G+ E+ F L ++ + +++N+I + TFLG D L+ L + N + ++
Sbjct: 87 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDID 146
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
G F L L+ + L I ++ + ++ + L+L GNRLK L E V P +
Sbjct: 147 PGAFQDLNKLEVLILNDNLISTLPANVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPGIA 205
Query: 205 TLSLDGNPWCCDCHLRSFRNWLL---KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPP 261
+ L+ NPW C C L S + WL K+ L + C P LQ K ++ Q+ CP
Sbjct: 206 EILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVV-CEAPTRLQGKDLNETTEQDL-CPL 263
Query: 262 NVTIKESM 269
+ S+
Sbjct: 264 KNRVDSSL 271
Score = 203 (76.5 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 71/266 (26%), Positives = 118/266 (44%)
Query: 24 CPDTCRCKWTLGKKSAL-CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGL 80
CP C C G + C + N ++L S++Q L L +NKI + + F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLADLKPKLSNVQELFLRDNKIHSIRRSHF--VDY 398
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
NL + L N+ I + +TFK L L + + N + L ++ F G L+ L + N
Sbjct: 399 KNLILLDLGNNNIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYNA 458
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES-VFFP 199
I + G F +P L+ + L + + S+ D ++ L L+L+ N +L + V
Sbjct: 459 IQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGVS-LSKLSLHNNYFMYLPVAGVLDQ 517
Query: 200 TPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHW-----DDV 252
++ + L GNPW C C + F+ W L S++ L C P K + D++
Sbjct: 518 LTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDEI 577
Query: 253 KAQEFA-CPPNVTI--KESMVIREAG 275
Q +A P +T K S + E G
Sbjct: 578 CPQLYAKISPTLTSHSKNSTGLAETG 603
>UNIPROTKB|F1NZH0 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:NGLPCPG GeneTree:ENSGT00680000099775
EMBL:AADN02029556 IPI:IPI00578668 ProteinModelPortal:F1NZH0
Ensembl:ENSGALT00000027326 Uniprot:F1NZH0
Length = 710
Score = 223 (83.6 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 67/248 (27%), Positives = 112/248 (45%)
Query: 19 PDWTDCPDTCRCKWTLGKKSAL-CKDANFTALPSTLD--SDIQVLDLNNNKISYLTKEAF 75
P CP C C G + C D N ++L S++Q L L +NKI + K F
Sbjct: 352 PAILSCPQICSCDQIPGSGLKVNCNDRNVSSLVDLKPKPSNVQELFLRDNKIHTIRKSHF 411
Query: 76 KSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLY 135
LNL + L N+ I V +TFK L L + + N + L ++ F G L+ L
Sbjct: 412 LDYRKLNL--LDLGNNNIATVENNTFKNLFDLRWLYMDSNYLDTLSREKFTGLQNLEYLN 469
Query: 136 LNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
+ N I + G F +P L+ + L + + S+ D ++ L L+++ N +L +
Sbjct: 470 VEFNGIQLIMPGTFNAMPKLRVLILNNNLLRSLPVDVFAGVS-LSKLSIHNNYFMYLPVA 528
Query: 196 -VFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLSCTEPGMLQTKHWDDV 252
V ++ + L GNPW C C + F+ W +L+ K+ L C P + ++ +
Sbjct: 529 GVLDQLTSITQIDLHGNPWDCTCPIVPFKQWAEMLRPKVIMSDLRCESPEDFFKEDFESL 588
Query: 253 KAQEFACP 260
+ + CP
Sbjct: 589 -SNDVICP 595
Score = 222 (83.2 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 67/241 (27%), Positives = 111/241 (46%)
Query: 28 CRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR 85
C C G C+ FT+L + S L L+ N ++ L F + N
Sbjct: 47 CACNEIEGDLHVDCEKKGFTSLQHFTAPTSQFYHLFLHGNSLTRLFPNEFANF--YNAVS 104
Query: 86 IYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELR 145
++++N+G+ E+ F L ++ + +++N+I + TFLG D L+ L + N + ++
Sbjct: 105 LHMENNGLHEIVPGAFLGLQLVKRLHINNNKIKSFRKQTFLGLDDLEYLQADFNLLRDID 164
Query: 146 AGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESVFFPTPNLK 204
G F L L+ + L I ++ + ++ + L+L GNRLK L E V P +
Sbjct: 165 PGAFRDLNKLEVLILNDNLISTLPPNVFQYVP-ITHLDLRGNRLKTLPYEEVLEQIPGIA 223
Query: 205 TLSLDGNPWCCDCHLRSFRNWLL---KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPP 261
+ L+ NPW C C L S + WL K+ L + C P LQ K ++ QE C
Sbjct: 224 EILLEDNPWDCTCDLLSLKEWLENIPKNALIGRVI-CEAPTRLQGKDLNETTEQEL-CKK 281
Query: 262 N 262
N
Sbjct: 282 N 282
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 237 (88.5 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 57/178 (32%), Positives = 92/178 (51%)
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++ I L+ +GI+ V F L +DLS+NQI+ + D F G L L L GN I
Sbjct: 306 SMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKI 365
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
T+L G F L L+ + L +IH V + L L L+L N+++ L++ F P
Sbjct: 366 TDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLK 425
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+++TL L NP+ CDC L+ ++L + + + C+ P L K +K+++F C
Sbjct: 426 SIQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRC 483
Score = 222 (83.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 63/236 (26%), Positives = 104/236 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C F ++P + + LDLN N ++++ K+ F GL +L
Sbjct: 31 CPPHCSCTGS----TVDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGKDDFA--GLKHL 84
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ ++L ++ I + R F L L + L+ N++ L + FL N L L L+ N I
Sbjct: 85 RILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNIQM 144
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L I + A + LE L LN N + + S F P L
Sbjct: 145 IPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKL 204
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDC L WL + C+ P L + +++ ++F C
Sbjct: 205 RTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYTQCSSPAHLHGLNLAELQKKDFTC 260
Score = 216 (81.1 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 63/224 (28%), Positives = 102/224 (45%)
Query: 42 KDANFTAL-PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRD- 99
KD N + P + V+D +N + LTK F L+ + L N+ + +
Sbjct: 502 KDCNSKPVCPPKCRCEATVVDCSNLR---LTK--FPEHLPLSTTELRLNNNDLSILEATG 556
Query: 100 TFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIE 159
F+ LT L +++LS+N+I + F G + L+L N + +R G F + L+ +
Sbjct: 557 LFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLM 616
Query: 160 LQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHL 219
L++ I VH + L + L+L N+L + F PNL TL+L NP+ CDC L
Sbjct: 617 LRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLANPFSCDCRL 676
Query: 220 RSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNV 263
WL ++ + C P L+ DV +F C +V
Sbjct: 677 SWLGEWLRSRQIVTGNPRCQNPAFLREIPLQDVAKPDFICDKDV 720
Score = 162 (62.1 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 49/165 (29%), Positives = 76/165 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ T+ C + T P L L LNNN +S L F+ L +
Sbjct: 510 CPPKCRCEATVVD----CSNLRLTKFPEHLPLSTTELRLNNNDLSILEATGLFRP--LTH 563
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I E+ F+ + +VE+ L+ N + + F G D L++L L N I
Sbjct: 564 LKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIR 623
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ F L ++ + L Q+ ++ A L L +LNL N
Sbjct: 624 CVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLAN 668
Score = 153 (58.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 48/164 (29%), Positives = 74/164 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ TA+P+ + + + L N I + AF S L
Sbjct: 278 CPPMCSCTNNIVD----CRGKGLTAIPANMPESMTEIRLEQNGIKSVPPGAFSSYK--RL 331
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F L L + L N+I L + F G L++L LN N I
Sbjct: 332 RRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKIHC 391
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+R F L L + L +I ++ K L ++++L+L N
Sbjct: 392 VRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKSIQTLHLAQN 435
Score = 136 (52.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 37/132 (28%), Positives = 61/132 (46%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
+L++L L+ N I+ L F + L T+ L + + + L++L L+L+GN +
Sbjct: 784 QLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLLSLHGNNI 843
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTK 247
L + +F +L L++ NP CDC LR +W+ KS Y P C P ++ K
Sbjct: 844 SELHQQIFRDAASLSHLAIGANPLYCDCRLRWLSDWV-KSG-YKEPGIARCAGPQGMEGK 901
Query: 248 HWDDVKAQEFAC 259
F C
Sbjct: 902 LLLTTPGNTFQC 913
Score = 40 (19.1 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 292 ILWLLNGQV--LHNSSFDLLEEEEGDALFEKSVS 323
+L L N + +HNSSF L+ +L++ +S
Sbjct: 614 MLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLS 647
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 236 (88.1 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 69/238 (28%), Positives = 103/238 (43%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP C C T + C A+P + + + L+LN N I+ + K F GL
Sbjct: 32 TACPALCTCTGT----TVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA--GLK 85
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
L+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N +
Sbjct: 86 QLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFL 145
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F LK ++L +I + + A L LE L LN N + + S F P
Sbjct: 146 QAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMP 205
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
L+T L N CDCHL WL + C+ P L+ + +V+ EF+C
Sbjct: 206 KLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKGEFSC 263
Score = 225 (84.3 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 60/212 (28%), Positives = 102/212 (48%)
Query: 48 ALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTIL 107
A P + V++ ++ K+S + + +S L L I E FK L+ L
Sbjct: 512 ACPHKCRCEASVVECSSLKLSKIPERIPQSTTELRLNN---NEISILEA-TGLFKKLSHL 567
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
+++LS+N+++ + TF G + L+L N + +R+G F L L+T+ L++ +I
Sbjct: 568 KKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
+H D+ L + L+L N + +S F L TL+L NP+ C+CHL +WL
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLR 687
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
K K+ + C P L+ DV +F C
Sbjct: 688 KRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 719
Score = 222 (83.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 430
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Score = 174 (66.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 56/195 (28%), Positives = 88/195 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ ++ + C + +P + L LNNN+IS L FK + +
Sbjct: 513 CPHKCRCEASVVE----CSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS--H 566
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ TF+ + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 567 LKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK---HLSESVFFP 199
+ F L ++ + L I ++ A L AL +LNL N HLS +
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLS---WLG 683
Query: 200 TPNLKTLSLDGNPWC 214
K + GNP C
Sbjct: 684 DWLRKRKIVTGNPRC 698
Score = 151 (58.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 39/140 (27%), Positives = 67/140 (47%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 845
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDC LR +W+ Y P C P ++ K
Sbjct: 846 TLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSWVKTG--YKEPGIARCAGPPEMEGKL 903
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP++ ++
Sbjct: 904 LLTTPAKKFECQGPPSLAVQ 923
Score = 99 (39.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LYL+GN T L GQ YL+ ++L + +I S+ + +++ L +L L+ N L+ +
Sbjct: 766 LYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 824
Query: 194 ESVFFPTPNLKTLSLDGN 211
F +L+ LSL GN
Sbjct: 825 PLAFQGLRSLRLLSLHGN 842
Score = 84 (34.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L NKI+ L + F GL LQ + L + I + D F+ L L + L DN+I
Sbjct: 362 LVLYGNKITDLPRGVFG--GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS 419
Query: 120 LHQDTFLGNDRLKVLYLNGNP 140
L + TF ++ L+L NP
Sbjct: 420 LAKGTFTSLRAIQTLHLAQNP 440
Score = 70 (29.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 383 LQLLLLNANKINCIRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 432
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 433 TLHLAQNPFICDCNLKWLADFLRTNPI 459
Score = 43 (20.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYL 88
++ +L L +NKI L K F S L +Q ++L
Sbjct: 406 NLSLLSLYDNKIQSLAKGTFTS--LRAIQTLHL 436
Score = 41 (19.5 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 323 SITLFNVTDLDAGEYTCYAENIRGNASG 350
S+ NV ++ GE++C + G A+G
Sbjct: 247 SLRGLNVAEVQKGEFSCSGQ---GEAAG 271
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 217 (81.4 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 58/180 (32%), Positives = 90/180 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + I+ + F L +DLS+NQI+ D F G L L L GN IT
Sbjct: 195 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 254
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + L +I+ + DA L L L+L N+L+ +++ F P
Sbjct: 255 ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 314
Query: 203 LKTL---SLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 315 IQTLYERHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 374
Score = 197 (74.4 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 48/159 (30%), Positives = 82/159 (51%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + F G + L L N + +R F L LKT+ L
Sbjct: 450 FKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLML 509
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ ++ V D+ L+++ L+L N++ ++ F +L TL+L NP+ C+CHL
Sbjct: 510 RSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLA 569
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+WL K ++ + C +P L+ DV Q+F C
Sbjct: 570 WLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 608
Score = 154 (59.3 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
++K+ L+ N I + F +K ++L + QI + A L LE L LN N +
Sbjct: 20 KIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNI 79
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHW 249
LS + F P L+T L N CDCHL +WL + C P L+ +
Sbjct: 80 TRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAHLRGHNV 139
Query: 250 DDVKAQEFAC 259
+V+ +EF C
Sbjct: 140 AEVQKREFVC 149
Score = 152 (58.6 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 51/192 (26%), Positives = 83/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + +P + L LNNN+ S L FK L
Sbjct: 402 CPEKCRCEGT----TVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKK--LPQ 455
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I ++ F + + E+ L+ N++ + F G + LK L L N ++
Sbjct: 456 LRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVS 515
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI +V + L +L +LNL N +
Sbjct: 516 CVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWL 575
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 576 RKKRIVTGNPRC 587
Score = 143 (55.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQ 148
N G++ + + K +T E+ L NQ + ++ L N + L ++ L+ N I+ L
Sbjct: 638 NKGLKALPKGIPKDVT---ELYLDGNQFTLVPKE--LSNYKHLTLIDLSNNRISTLSNQS 692
Query: 149 FPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
F + L T+ L + ++ + L +L L+L+GN + + E F L L++
Sbjct: 693 FSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 752
Query: 209 DGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVT 264
NP CDC+++ +W+ KS+ Y P C PG + K +++F C P +V
Sbjct: 753 GANPLYCDCNMQWLSDWV-KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVN 810
Query: 265 I 265
I
Sbjct: 811 I 811
Score = 128 (50.1 bits), Expect = 0.00028, P = 0.00028
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA--FKSIGLL 81
CP C C T+ + C + ALP + D+ L L+ N+ + + KE +K + L+
Sbjct: 623 CPAECTCLDTVVR----CSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLI 678
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + +F +T L+ + LS N++ + TF G L++L L+GN I
Sbjct: 679 DLS-----NNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDI 733
Query: 142 TELRAGQFPKLPYLKTIEL 160
+ + G F L L + +
Sbjct: 734 SVVPEGAFNDLSALSHLAI 752
Score = 117 (46.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N + L A G F KLP L+ I L + +I + + A + + L L NRL+ +
Sbjct: 434 LRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETV 493
Query: 193 SESVFFPTPNLKTLSLDGNPWCC--DCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKH 248
+ +F +LKTL L N C + + L S LY + ++ PG T H
Sbjct: 494 RDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLS-LYDNQITTVAPGSFDTLH 550
Score = 84 (34.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP L +Q+L LN NKI+ L +AF+ + LNL +Y ++ ++ + + TF
Sbjct: 254 TELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLY--DNKLQTIAKGTFSP 311
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVL--YLNGNPI 141
L + L + +A Q+ F+ + LK L YL+ NPI
Sbjct: 312 LRAIQT--LYERHLA---QNPFICDCHLKWLADYLHTNPI 346
Score = 75 (31.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
I++ DL+ N+I + ++AF+ G ++++ + L + I + F+ L L + L++N
Sbjct: 21 IKISDLSENQIQAIPRKAFR--GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNN 78
Query: 117 IAWLHQDTFLGNDRLKVLYLNGN 139
I L +F +L+ L+ N
Sbjct: 79 ITRLSVASFNHMPKLRTFRLHSN 101
Score = 60 (26.2 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN 90
D++VL LNNN I+ L+ +F + L R++ N
Sbjct: 68 DLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNN 102
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 223 (83.6 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 74/253 (29%), Positives = 110/253 (43%)
Query: 16 TGSPDWTDCPDTCRCKW---TLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYL 70
T P T CP C CK LG S C++ N ++ + L +N N I +
Sbjct: 334 TRVPPLTPCPVPCFCKTHPSDLGL-SVNCQEKNIQSMSELTPKPLNAKKLHVNGNNIKDV 392
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
F L+L ++L ++ I + + F LT L + L+ NQI L+ + F G
Sbjct: 393 DISDFTEFEGLDL--LHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHN 450
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ LYL N I E+ AG F +P L+ + L + + S+ + L LNL N+
Sbjct: 451 LQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPV-YIFSGAPLARLNLRNNKFM 509
Query: 191 HLSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTK 247
+L S V +L + L+GNPW C C L + + WL L + L C P
Sbjct: 510 YLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKELKCETPVQFANI 569
Query: 248 HWDDVKAQEFACP 260
+K E CP
Sbjct: 570 ELKSLK-NEILCP 581
Score = 197 (74.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 58/209 (27%), Positives = 95/209 (45%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S+ L+ NN ++ L F + + ++L N+ ++ + F L+ L ++ L++
Sbjct: 59 SNFYHLNFQNNFLNILYPNTF--VNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNN 116
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ L DTFLG + L+ L + N I + G F KL LK + L I S D +
Sbjct: 117 NELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLI-SFLPDNIF 175
Query: 175 HLTALESLNLNGNRLKHLSE-SVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKL 231
+L L++ GNR++ L V + L L+ NPW C C L + WL + +
Sbjct: 176 RFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNI 235
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQEFACP 260
Y C P L + + QE CP
Sbjct: 236 YIGEAICETPSDLYGRLLKETNKQEL-CP 263
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
VL +N K+S K N + +N+ + ++ +TF + V + L +N++
Sbjct: 38 VLYVNCEKVSVYRPNQLKP-PWSNFYHLNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQ 96
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+ FLG LK L+LN N + LRA F + L+ ++ + I + + A L
Sbjct: 97 NIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHK 156
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ L LN N + L +++F +L L + GN
Sbjct: 157 LKVLILNDNLISFLPDNIF-RFASLTHLDIRGN 188
>ZFIN|ZDB-GENE-040924-5 [details] [associations]
symbol:lrit1a "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1a" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-040924-5 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG108105 EMBL:BC095674 IPI:IPI00498659 UniGene:Dr.82959
ProteinModelPortal:Q502J4 InParanoid:Q502J4 Uniprot:Q502J4
Length = 643
Score = 221 (82.9 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 76/298 (25%), Positives = 136/298 (45%)
Query: 85 RIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITEL 144
++ ++ + I+ + + F YL+ L + +S N ++ L+ D+F G L+ L L+GN ++
Sbjct: 63 KLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSF 122
Query: 145 RAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF------ 198
+P L+ +++ + Q+ S+ +A +++ + L+L+ N L + V
Sbjct: 123 PWESLMDMPSLRLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLTIK 182
Query: 199 PTPNLKT----LSLDGNPWCCDCHLRSF----RNWLLKSKLYSHPLSCTEPGMLQTKHWD 250
PT ++ L L NPW CDC L ++ L L C +P L +
Sbjct: 183 PTLGAESSKLILGLHDNPWLCDCRLYDLVQFQKSPSLSVAFIDTRLRCADPESLSGVLFS 242
Query: 251 DVKAQEFACP-PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL-LNGQVLHNSSFDL 308
D + + C P V + V G NV + C G P P + W +G+ L+ + L
Sbjct: 243 DAELRR--CQGPRVHTAVARVRSAVGNNVLLRCGTVGAPIPELAWRRADGKPLNGTV--L 298
Query: 309 LEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL---DLPEINLAT 363
LE + + + +S+ V+ D G+Y C A N G+A ISL D P++ T
Sbjct: 299 LENSK-EGIVWSILSVPA--VSYRDTGKYICKATNYAGSAEAVISLIINDAPKMENPT 353
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 224 (83.9 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 79/301 (26%), Positives = 132/301 (43%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+NN IS + ++ + L + L + + + ++ L+ L + LS N I+
Sbjct: 290 LHLSNNSISRIQRDGWSFCQ--KLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISH 347
Query: 120 LHQDTFLGNDRLKVLYLNGNPIT---ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ + F G L+VL L+ N I+ E +G F L L + L +I SV K A L
Sbjct: 348 IAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGL 407
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSH-P 235
+LE LNL N ++ + F NLK L + + CDC L+ WL+ L +
Sbjct: 408 ESLEHLNLGENAIRSVQFDAFAKMKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVT 467
Query: 236 LSCTEPGMLQTKHWDDVKAQEFAC---P-PNVTIKESMVIREAGGNVTMSCYVYGDPE-P 290
+C P L+ + V F C P P + + + G ++ +C P
Sbjct: 468 ATCAHPESLKGQSIFSVLPDSFVCDDFPKPQIITQPETTMAVVGKDIRFTCSAASSSSSP 527
Query: 291 -TILWLLNGQVLHNS---SFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
T W + +VL N+ +F + ++G+ + E + + L +VT G Y C N G
Sbjct: 528 MTFAWKKDNEVLANADMENFAHVRAQDGEVM-EYTTILHLRHVTFGHEGRYQCIITNHFG 586
Query: 347 N 347
+
Sbjct: 587 S 587
Score = 156 (60.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S + VL L N + + + GL L +++L N+ I + RD + + L E+ LS
Sbjct: 261 SKMHVLHLEYNSLVEVNSGSL--YGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSF 318
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD--- 171
N + L +++ L +L L+ N I+ + G F L L+ ++L H +I +D
Sbjct: 319 NNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSG 378
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
A L L L L GN++K +++ F +L+ L+L N
Sbjct: 379 AFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGEN 418
Score = 145 (56.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 51/168 (30%), Positives = 81/168 (48%)
Query: 47 TALPSTLDSDIQVLDL--NNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
TA+PS + I V+ L +NKI + KS L+L+ + L ++ I E+ F
Sbjct: 107 TAIPSLGAASIGVVSLFLQHNKILSVDGSQLKSY--LSLEVLDLSSNNITEIRSSCFPNG 164
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
+ E++L+ N+I+ L F G R L L L+ N IT+L F KLP L ++L
Sbjct: 165 LRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAF-KLPRLTQLDLNRN 223
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+I + L +LE L L N + L++ F+ + L L+ N
Sbjct: 224 RIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYN 271
Score = 141 (54.7 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 52/186 (27%), Positives = 85/186 (45%)
Query: 28 CRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIY 87
C T S C LP L S + L+L+ N++S + AF+ L NLQ +Y
Sbjct: 43 CAAACTCAGDSLDCSGRGLATLPRDLPSWTRSLNLSYNRLSEIDSAAFED--LTNLQEVY 100
Query: 88 LKNSGIREVHRDTFKYLTI-LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRA 146
L ++ + + + +I +V + L N+I + L+VL L+ N ITE+R+
Sbjct: 101 LNSNELTAI--PSLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRS 158
Query: 147 GQFPKLPYLKTIELQHCQIHSVHKDALIHLT-ALESLNLNGNRLKHLSESVFFPTPNLKT 205
FP ++ + L +I + A L+ +L +L L+ NR+ L F P L
Sbjct: 159 SCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAF-KLPRLTQ 217
Query: 206 LSLDGN 211
L L+ N
Sbjct: 218 LDLNRN 223
Score = 137 (53.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 46/159 (28%), Positives = 70/159 (44%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
L + L L+ N+I+ L +AFK L L ++ L + IR + TF+ L L + L
Sbjct: 188 LSRSLLTLRLSKNRITQLPVKAFK---LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRL 244
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
N I+ L F G ++ VL+L N + E+ +G L L + L + I + +D
Sbjct: 245 QRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDG 304
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L L+ N L L E +L L L N
Sbjct: 305 WSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHN 343
Score = 129 (50.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 47/159 (29%), Positives = 80/159 (50%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK-YLTILVEVDLS 113
+++Q + LN+N+++ + SIG+++L +L+++ I V K YL++ V +DLS
Sbjct: 94 TNLQEVYLNSNELTAIPSLGAASIGVVSL---FLQHNKILSVDGSQLKSYLSLEV-LDLS 149
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY-LKTIELQHCQIHSVHKDA 172
N I + F R++ L L N I+ L +G F L L T+ L +I + A
Sbjct: 150 SNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKA 209
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L L+LN NR++ + F +L+ L L N
Sbjct: 210 F-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRN 247
Score = 127 (49.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 38/152 (25%), Positives = 74/152 (48%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDLN N+I + F+ GL +L+ + L+ + I + F L+ + + L N +
Sbjct: 218 LDLNRNRIRLIEGLTFQ--GLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVE 275
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
++ + G L L+L+ N I+ ++ + L + L + + +++L L++L
Sbjct: 276 VNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSL 335
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+ N + H++E F +L+ L LD N
Sbjct: 336 SILRLSHNAISHIAEGAFKGLKSLRVLDLDHN 367
Score = 87 (35.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 32/110 (29%), Positives = 47/110 (42%)
Query: 261 PNVT-IKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P+ T I + IR G + C G P P I W +G + F E + +
Sbjct: 601 PSFTKIPHDIAIR-TGTTARLECAATGHPNPQIAWQKDG----GTDFPAARERRMHVMPD 655
Query: 320 KSVSITLFNVTDL---DAGEYTCYAENIRGNASGEISLDLPEI-NLATTL 365
V F +TD+ D G Y+C A+N G+ S +L + E +LA L
Sbjct: 656 DDV----FFITDVKIDDMGVYSCTAQNSAGSVSANATLTVLETPSLAVPL 701
Score = 78 (32.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 31/100 (31%), Positives = 43/100 (43%)
Query: 261 PNVTIK-ESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFE 319
P++ + E V+ G V C G P P I WL G+ L S + G+ L
Sbjct: 695 PSLAVPLEDRVVT-VGETVAFQCKATGSPTPRITWLKGGRPL--SLTERHHFTPGNQL-- 749
Query: 320 KSVSITLFNVTDLDAGEYTCYAENIRGN--ASGEISLDLP 357
+ + NV DAG YTC N G A ++S+ LP
Sbjct: 750 ----LVVQNVMIDDAGRYTCEMSNPLGTERAHSQLSI-LP 784
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 221 (82.9 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 89/327 (27%), Positives = 149/327 (45%)
Query: 34 LGKKSAL-CKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSG 92
LG L KD NF L L S + + +N ++ + +A +GL NL+ I ++
Sbjct: 195 LGDNPILRIKDMNFQPLLK-LRS-LVIAGIN---LTEVPDDAL--VGLENLESISFYDNR 247
Query: 93 IREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP-ITELRAGQFPK 151
+ +V + + L +DL+ N I + + F LK L +N P + + +
Sbjct: 248 LNKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDN 307
Query: 152 LPYLKTIEL-QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDG 210
LP L+ IE + ++ +H +A L LESL LN N L L PNLK +S+
Sbjct: 308 LPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHS 367
Query: 211 NPWCCDCHLRSFRNWLLKSKL---YSHP--LSCTEPGMLQTKHWDDVKAQEFA--CPPNV 263
NP CDC +R W+ +K + P L C +P Q ++ V ++ C P +
Sbjct: 368 NPIRCDCVIR----WINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLI 423
Query: 264 TIKE--SMVIREAGGNVTMSCYVYGDPEPTILWLL-NGQ-VLHNSSFDLLEEEEGDALFE 319
+ S++ EA V++ C +P+P I W+ +G+ +L N+ L E+
Sbjct: 424 APESFPSILDVEADSYVSLHCRATAEPQPEIYWITPSGKRLLPNT----LREK---FYVH 476
Query: 320 KSVSITLFNVTDLDAGEYTCYAENIRG 346
++ + +T + G YTC A N+ G
Sbjct: 477 SEGTLDIRGITPKEGGLYTCIATNLVG 503
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 43/151 (28%), Positives = 75/151 (49%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLH 121
L NK++ L ++ GL NLQ +Y+ ++ + + F L L+ + L+ N++ ++
Sbjct: 123 LEENKLTELPEKCL--YGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMIN 180
Query: 122 QDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALES 181
F L++L L NPI ++ F L L+++ + + V DAL+ L LES
Sbjct: 181 SKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLENLES 240
Query: 182 LNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
++ NRL + + NLK L L+ NP
Sbjct: 241 ISFYDNRLNKVPQVALQKAVNLKFLDLNKNP 271
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/197 (23%), Positives = 82/197 (41%)
Query: 23 DCPDTCRCK---WTLGKKSAL------CKDANFTALPSTLDSDIQVLDLNNNKISYLTKE 73
DCP C C+ W + + C D P+ L +D Q+L L N I+ +
Sbjct: 28 DCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHS 87
Query: 74 AFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKV 133
+ L L L + + V + ++ L+ V L +N++ L + G L+
Sbjct: 88 TDFPVNLTGLD---LSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQE 144
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LY+N N ++ + G F L L + L ++ ++ L LE L L N + +
Sbjct: 145 LYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIK 204
Query: 194 ESVFFPTPNLKTLSLDG 210
+ F P L++L + G
Sbjct: 205 DMNFQPLLKLRSLVIAG 221
Score = 131 (51.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 43/158 (27%), Positives = 80/158 (50%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S++Q L +N+N +S ++ AF +GL NL R++L ++ ++ ++ F+ L L + L D
Sbjct: 140 SNLQELYVNHNLLSAISPGAF--VGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGD 197
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N I + F +L+ L + G +TE+ L L++I +++ V + AL
Sbjct: 198 NPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLENLESISFYDNRLNKVPQVALQ 257
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L+ L+LN N + + F +LK L ++ P
Sbjct: 258 KAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMP 295
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 221 (82.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 78/261 (29%), Positives = 115/261 (44%)
Query: 24 CPDTCRCKWTLGKKSAL--CKDANFTALPSTLDSDIQ---VLDLNNNKISYLTKEAFKSI 78
CP C CK L L C++ N +L S L Q L L N I L K +
Sbjct: 331 CPIPCNCK-VLSPSGLLIHCQERNIESL-SDLKPPPQNPRKLILAGNIIHTLMK--YDLA 386
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+ ++L N+ I + +F LT L ++ L+ N + L FLG L+ LYL
Sbjct: 387 EYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEY 446
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N + E+ G F +P LK + L + + V + L +NL N+ HL S
Sbjct: 447 NGVKEILPGTFNPMPKLKVLYLNN-NLLQVLPPHIFSGVPLTRINLKTNQFTHLPVSNIL 505
Query: 199 PTPNLKT-LSLDGNPWCCDCHLRSFRNWLLK-SK-LYSHPLSCTEPGMLQTKHWDDVKAQ 255
+L T + L+ NPW C C L + W+ K SK + + + CT P L K + +
Sbjct: 506 DDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNIVTDEILCTSPEHLDKKELKALNS- 564
Query: 256 EFACP-----PNVTIKESMVI 271
E CP P++ + S VI
Sbjct: 565 ELLCPGLVNNPSLPTQTSYVI 585
Score = 192 (72.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 65/242 (26%), Positives = 103/242 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
C C C+ G C++ + L S S L L NN ++ L F GL
Sbjct: 33 CDSLCNCEEKDGTMLINCEEKDIKKLSQISVPASRPFHLSLLNNGLTMLHANDFS--GLT 90
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N I+L + I ++ F L +L ++ ++ N + L +DTF G + L+ L + N I
Sbjct: 91 NAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNFI 150
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-T 200
T + F KL LK + L I S+ + + L L+L GN+L+ L F
Sbjct: 151 TVIEPSAFSKLNRLKVLILNDNAIESLPPN-VFRFVPLTHLDLRGNQLQTLPYVGFLEHI 209
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L+ N W C+C L + WL + + + C P + +K +E
Sbjct: 210 GRILDLQLEDNKWACNCDLLQLKLWLENMPPQTVIGDVVCNSPPFFKGSILSRLK-KESI 268
Query: 259 CP 260
CP
Sbjct: 269 CP 270
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 220 (82.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 88/329 (26%), Positives = 141/329 (42%)
Query: 34 LGKKSALCKDANFTAL-PSTLDS--DIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLK 89
LG + N T+L P +L + L L + I+ L + F+ + GL +L+ +
Sbjct: 173 LGLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLE---ID 229
Query: 90 NSGI-REVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQ 148
N + EV + + L L + ++ I + L L L+ NPI+ + G
Sbjct: 230 NWPLLEEVAPGSLRGLN-LTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGS 288
Query: 149 FPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
F L L+ + L + + A + L + LNL+ N L L E+ F L+TL +
Sbjct: 289 FRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRV 348
Query: 209 DGNPWCCDCHLRSFRNWLL---KSKLYSHPL-SCTEPGMLQ--TKHW--DDVKAQEFAC- 259
DGNP CDC L W++ K+ + L +C P ++ H D V + F C
Sbjct: 349 DGNPLACDCRLL----WIVQRRKTLNFDGRLPACATPAEVRGDALHNLPDSVLFEYFVCR 404
Query: 260 PPNVTIKESM-VIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALF 318
P + + V G +V C G+P PT+ W+ Q H+S + G A
Sbjct: 405 KPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTVAWV-TPQ--HHS---VTAASRGRARV 458
Query: 319 EKSVSITLFNVTDLDAGEYTCYAENIRGN 347
++T+ + D+G YTC A N GN
Sbjct: 459 LPGGTLTIADTRPQDSGTYTCVASNAGGN 487
Score = 143 (55.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ LDLN+N I+++ AF ++ L + R L+ + ++ + F +L L +DLS+N+
Sbjct: 79 LEELDLNHNVIAHVEPGAFANLPRLRVLR--LRGNQLKLIPPGVFTHLDSLTLLDLSENK 136
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L +F L+ L + N + + F L L + L+ C + S+ ++L HL
Sbjct: 137 LVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHL 196
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSH 234
L +L L + L + F P L L +D P + S R L S +H
Sbjct: 197 RGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGLNLTSLSITH 254
Score = 125 (49.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 46/174 (26%), Positives = 75/174 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + ++ C TA+P + ++ ++L+L+ N+I L S L L
Sbjct: 24 CPARCEC--SASTRTVACGRRRLTAIPEGIPAETRMLELSRNRIRCLNPGDLAS--LPTL 79
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L ++ I V F L L + L NQ+ + F D L +L L+ N +
Sbjct: 80 EELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVI 139
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESV 196
L F L L+ +E+ + + + A L L L L L LS ES+
Sbjct: 140 LLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESL 193
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 529 VGTGPGTNPAYFATLPRRP 547
V + G N YFATL +P
Sbjct: 480 VASNAGGNDTYFATLTVQP 498
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 230 (86.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 59/210 (28%), Positives = 102/210 (48%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+L+ N++ + A L +L + L + ++ + F++L L + L NQ
Sbjct: 205 LRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQ 264
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L + F G + L+ L L GN +++L L L+ ++L ++ ++H HL
Sbjct: 265 LTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHL 324
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL----LKSKLY 232
L L+L N L LS +F +P L L LDGN W CDC LR + W+ + +L
Sbjct: 325 GRLRELSLRNNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGDWHSQGRLL 384
Query: 233 SHPLSCTEPGMLQTKHWD---DVKAQEFAC 259
+ + C P L+ K+ D D + Q +C
Sbjct: 385 TVFVQCRHPPALRGKYLDYLDDQQLQNGSC 414
Score = 188 (71.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 57/192 (29%), Positives = 91/192 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPST--LDS--DIQVLDLNNNKISYLTKEAFKSIG 79
CP+ C C+ + LC + +P T L S D+ L N I+ +T F +G
Sbjct: 27 CPERCDCQHP---QHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNITAFDFHRLG 83
Query: 80 LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN 139
L+R+ L+ + IR +H TF+ L+ L E+ L +N + L T +L++LY NGN
Sbjct: 84 --QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 140 PITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
I+ L G F L L + L + ++ L L L+L NR++ L ++ F
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQ 201
Query: 200 TPNLKTLSLDGN 211
L+ L+L N
Sbjct: 202 LGKLRFLNLSAN 213
Score = 152 (58.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 58/176 (32%), Positives = 84/176 (47%)
Query: 43 DAN-FTALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIG---LLNLQRIYLKNSGIRE 95
D N ALP + + ++ L L +N+I +L K AF +G LNL L+ S +R
Sbjct: 163 DGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANELQPS-LR- 220
Query: 96 VHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYL 155
H TF L L + LS N + L F RL +L L GN +T L F L L
Sbjct: 221 -HAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEAL 279
Query: 156 KTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ + L+ ++ + L L +LE+L+L+GN L L + F L+ LSL N
Sbjct: 280 RELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNN 335
Score = 133 (51.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 45 NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
N TA ++ LDL N+I L + F+ + L+ +YL N+ ++ + T L
Sbjct: 73 NITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLS--RLEELYLGNNLLQALAPGTLAPL 130
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
L + + N+I+ L + +F G + L L L+GN + L F L L + L+ +
Sbjct: 131 RKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNR 190
Query: 165 IHSVHKDALIHLTALESLNLNGNRLK-HLSESVFF-PTPNLKTLSLDGN 211
I + K+A L L LNL+ N L+ L + F P +L +L L N
Sbjct: 191 IRFLGKNAFAQLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSAN 239
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 520 IDMPHRSVSVGTGPGTNPAYFATLPRRPRSKVIEPS 555
+ P SV+ GP P+R R +P+
Sbjct: 491 LQQPSPSVAAAAGPAPQSLDLHKKPQRGRPTRADPA 526
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 224 (83.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 55/178 (30%), Positives = 90/178 (50%)
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++ I L+ + I+ + F L +DLS+NQI+ L D F G L L L GN I
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
T+L G F L L+ + L +IH + + L L L+L N+++ L++ F
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR 422
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + CT P L K +K+++F C
Sbjct: 423 AIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKFRC 480
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 63/236 (26%), Positives = 98/236 (41%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T + C +P + + + L+LN N ++ + + F GL L
Sbjct: 27 CPALCTCSGT----TVDCHGLGLKNIPRNIPRNTERLELNGNNLTRINRNDFT--GLKYL 80
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I V R F + L + L+ NQ+ L + F N L L L+ N I
Sbjct: 81 RVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSENFIQA 140
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F +K ++L I + A + LE L LN N + + S F P L
Sbjct: 141 IPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKL 200
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+T L N CDC L WL + C+ P L+ + +V+ EF+C
Sbjct: 201 RTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFTQCSSPAPLRGLNVAEVQKHEFSC 256
Score = 199 (75.1 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 50/173 (28%), Positives = 84/173 (48%)
Query: 88 LKNSGIREVHR-DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRA 146
L N+ I + FK LT L +++LS+N+I+ + F G + L+L N + +
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 147 GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTL 206
G F L L+ + L++ +I +H ++ L + L+L N L ++ F +L TL
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTL 659
Query: 207 SLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+L NP+ C+C L +WL K+ + C P L+ DV A +F C
Sbjct: 660 NLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQDVAAPDFRC 712
Score = 164 (62.8 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 59/191 (30%), Positives = 86/191 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ T +PS+L + + L N I + AF L
Sbjct: 275 CPAVCSCNNNIVD----CRGKGPTLIPSSLPDSMTEIRLEQNSIKSIPPGAFSPYK--KL 328
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F+ L L + L N+I L + F G L++L LN N I
Sbjct: 329 RRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHC 388
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
LRA F L L + L +I ++ K L A+++L HL+++ F NL
Sbjct: 389 LRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTL--------HLAQNPFICDCNL 440
Query: 204 KTLS--LDGNP 212
K L+ L NP
Sbjct: 441 KWLADYLRSNP 451
Score = 145 (56.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
+ E+ L NQ++ + ++ L + + L+++ L+ N I+ L F + L T+ L + +
Sbjct: 756 ITELYLDGNQLSTVPKE--LSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNAL 813
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
+ A L +L L+L+GN + L + +F +L L++ NP CDC LR +W
Sbjct: 814 RCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLRWLSDW 873
Query: 226 LLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFACPPNV 263
+ Y P C P ++ K A+ F C V
Sbjct: 874 VKTG--YKEPGIARCASPHGMEGKLLLTTPAKRFECQGEV 911
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 86/315 (27%), Positives = 139/315 (44%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + L+ L LK + + F+ L L ++L
Sbjct: 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK--LEYISEGAFEGLFNLKYLNLG 204
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
I + T L L+ L ++GN E+R G F L LK + + + Q+ + ++A
Sbjct: 205 MCNIKDMPNLTPLVG--LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 262
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +L LNL N L L +F P L L L NPW CDC + + W L+ + +
Sbjct: 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL-WLAWWLREYIPT 321
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFAC--PPNVTIKESMVIREAGGNVTMSCYVYGDP 288
+ C P ++ ++ +V F C P + + I E G + C P
Sbjct: 322 NSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE-GRMAELKCRT--PP 378
Query: 289 EPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
++ WLL NG VL ++S L + +++ + +V D G YTC N+ GN
Sbjct: 379 MSSVKWLLPNGTVLSHAS----RHPRISVLNDGTLNFS--HVLLSDTGVYTCMVTNVAGN 432
Query: 348 --ASGEISLDLPEIN 360
AS +++ E+N
Sbjct: 433 SNASAYLNVSTAELN 447
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 47/190 (24%), Positives = 86/190 (45%)
Query: 23 DCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
+CP C C K +C + +P + S+ + L+L N I + + F+ L +
Sbjct: 45 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRH--LHH 100
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L+ + L + IR++ F L L ++L DN + + F +L+ L+L NPI
Sbjct: 101 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 160
Query: 143 ELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ + F ++P L ++L + + + + A L L+ LNL +K + P
Sbjct: 161 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLV 218
Query: 202 NLKTLSLDGN 211
L+ L + GN
Sbjct: 219 GLEELEMSGN 228
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 216 (81.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 63/204 (30%), Positives = 102/204 (50%)
Query: 41 CKDANFTALPSTLDS--DIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGIREVH 97
C NF +P + ++ + L N+I + A+ S+ GL L+ + L+++ I VH
Sbjct: 159 CFQNNFRRIPGAIRGMENLTHVYLERNRIEAV---AYNSLQGLTKLKYLNLQDNRINVVH 215
Query: 98 RDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKT 157
F+ + + L+DN I+ L +++F G LK+L L GN + + F L L+
Sbjct: 216 ERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEV 275
Query: 158 IELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDC 217
+ L +I+ + + A +LT+L SL+LN N L L SVF P L L L NPW CDC
Sbjct: 276 LYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWECDC 335
Query: 218 HLRSFRNWLLKSKLYSHPLSCTEP 241
+ + W+ +L + C P
Sbjct: 336 RIEWLKEWMENYRLV-RDIPCASP 358
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 55/211 (26%), Positives = 93/211 (44%)
Query: 24 CPDTCRCKWTLGKK-SALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP C C T + S LC A +PS + ++L+ N I +L++ AF + L +
Sbjct: 25 CPANCVC--TQERSCSVLCDRAGLGQIPSEFPCEASSINLDKNSIKFLSERAFGT--LPS 80
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLNGNPI 141
L+ + L ++ I + FK L L E+ ++ N+ I +LH TF RL L L +
Sbjct: 81 LKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLADCNL 140
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ F +LP L+ + + A+ + L + L NR++ ++ +
Sbjct: 141 FNIPDRIFIELPSLQELFCFQNNFRRI-PGAIRGMENLTHVYLERNRIEAVAYNSLQGLT 199
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLY 232
LK L+L N H R+F+ LY
Sbjct: 200 KLKYLNLQDNRINV-VHERAFQGCRKMEYLY 229
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 219 (82.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 57/177 (32%), Positives = 89/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ + IR + F L +DLS+NQI+ L D F G L L L GN IT
Sbjct: 220 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 279
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL F L L+ + L +I+ + DA L L L+L N+L+ +++ F
Sbjct: 280 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 339
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++T+ L NP+ CDCHL+ ++L + + + CT P L K +K+++F C
Sbjct: 340 IQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRC 396
Score = 197 (74.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 63/236 (26%), Positives = 109/236 (46%)
Query: 29 RCKWTLGKKSALCKDANFT--ALPSTLDSDIQVLDLNNNKISYLTK---EAFKSIGLLNL 83
RC T +S L D F A P + +D +N K++ + + + L N
Sbjct: 395 RCSGTEDYRSKLSGDC-FADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNN 453
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L+ +GI FK L L +++LS+N+I + + F G + + L N +
Sbjct: 454 EFTVLEATGI-------FKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLEN 506
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
++ F L LKT+ L+ +I V D+ L ++ L+L N++ ++ F +L
Sbjct: 507 VQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSL 566
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
TL+L NP+ C+CHL WL + ++ + C +P L+ DV Q+F C
Sbjct: 567 STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 622
Score = 180 (68.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 50/167 (29%), Positives = 74/167 (44%)
Query: 93 IREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKL 152
I + R F+ L L + L+ N + + FLG +L L L+ N I + F
Sbjct: 5 ISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGA 64
Query: 153 PYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+K ++L + QI + A L LE L LN N + LS + F P L+T L N
Sbjct: 65 VDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNN 124
Query: 213 WCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
CDCHL +WL + C P L+ + +V+ +EF C
Sbjct: 125 LYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 171
Score = 150 (57.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 47/165 (28%), Positives = 77/165 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + +P + L LNNN+ + L FK L
Sbjct: 416 CPEKCRCEGT----TVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 469
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I ++ F+ + + E+ L+ N++ + F G + LK L L N I+
Sbjct: 470 LRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 529
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ F L ++ + L QI +V A L +L +LNL N
Sbjct: 530 CVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLAN 574
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 222 (83.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 54/178 (30%), Positives = 93/178 (52%)
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++ I L+ + I+ + F L +D+S NQI+ + D F G L L L GN I
Sbjct: 122 DIWEIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKI 181
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
TE+ G F L L+ + L +I+ + + L L+ L+L N+L+ +S+ +F P
Sbjct: 182 TEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLR 241
Query: 202 NLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+++TL L NP+ CDCHL+ ++L + + + C+ P L K +K+++F C
Sbjct: 242 SIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFRC 299
Score = 203 (76.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 49/162 (30%), Positives = 81/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + TF G ++ L L N + + F L LKT+ L
Sbjct: 367 FKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLML 426
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I ++ D L+++ L+L N + ++ F +L T++L N + C+CHL
Sbjct: 427 RSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLA 486
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV AQ+F C N
Sbjct: 487 WLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGN 528
Score = 189 (71.6 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 59/192 (30%), Positives = 88/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + T LPS L L LN+N IS L FK L N
Sbjct: 319 CPEKCRCEGTVVD----CSNQKLTRLPSHLPEYTTDLRLNDNDISVLEAIGLFKK--LPN 372
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+E+ TF + + E+ L++NQ+ +H F G LK L L N I+
Sbjct: 373 LRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSIS 432
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L I ++ A L +L ++NL N +
Sbjct: 433 CINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWL 492
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 493 RKKRIVSGNPRC 504
Score = 163 (62.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 48/164 (29%), Positives = 73/164 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C C+ T +P+ L DI + L N I + AF L
Sbjct: 94 CPSACTCS----NNVVDCRGRGLTEIPANLPEDIWEIRLEQNLIKVIPPGAFTQYK--KL 147
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI + + I E+ D FK L L+ + L N+I + Q F L++L LN N I
Sbjct: 148 KRIDISKNQISEIAPDAFKGLKSLISLVLYGNKITEIPQGLFDDLVSLQLLLLNANKINC 207
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
LR F L LK + L ++ ++ K L ++++L+L N
Sbjct: 208 LRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQN 251
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 215 (80.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/165 (34%), Positives = 84/165 (50%)
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
+G+ L+ + L+ + +R VH F L ++ L+DN +A L F G RL+ L L
Sbjct: 198 LGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNLG 257
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
GN + + F L L+ + L I V + A +L+ L +L+LNGNRL LS + F
Sbjct: 258 GNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAF 317
Query: 198 FPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPG 242
P L L L NPW CDC L R+W+ S + ++C PG
Sbjct: 318 QPGFFLGRLFLFRNPWRCDCQLEWLRDWMEGSGRVAD-VACASPG 361
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C S C A +P + +DL+ N + L + AF + L +L
Sbjct: 26 CPAACTCSHVERGCSVRCDRAGLQRVPQEFPCEAASIDLDRNGLRILGERAFGT--LPSL 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+R+ L+++ + + FK L L E+ L+ N ++ +LH TF RL+ L L +
Sbjct: 84 RRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRYLHVRTFAALGRLRRLDLAACRLF 143
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ +LP L+ + V AL L L + +R++ ++
Sbjct: 144 SVPERLLAELPALRELTAFDNLFRRV-PGALRGLANLTHAHFERSRIEAVASGSLLGMRR 202
Query: 203 LKTLSLDGN 211
L++LSL N
Sbjct: 203 LRSLSLQAN 211
>ZFIN|ZDB-GENE-060616-45 [details] [associations]
symbol:lrit1b "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1b" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-060616-45 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 HOGENOM:HOG000063714
HOVERGEN:HBG108105 EMBL:CABZ01112650 EMBL:BC117586 IPI:IPI00607359
RefSeq:NP_001036218.1 UniGene:Dr.84695 Ensembl:ENSDART00000127706
GeneID:553432 KEGG:dre:553432 CTD:553432 InParanoid:Q1ED19
NextBio:20880185 Uniprot:Q1ED19
Length = 654
Score = 218 (81.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 83/343 (24%), Positives = 145/343 (42%)
Query: 24 CPDTCRC---KWTLGKKS--ALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
CP C C K + G KS LC D + T +P D L + +S ++ F+ +
Sbjct: 23 CPAQCSCFYHKLSDGSKSRSVLCNDPDLTDIPDNFPLDASKLRIEKTSLSRISSAPFQQL 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
+L+ +++ + + + DTF+ L L E+ + N + + L L++L L+
Sbjct: 83 S--SLEYLWISFNSLSSISPDTFRGLYALDELRMDGNVLTSFPWECLLDMPSLRLLDLHN 140
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH-LTALESLNLNGNRLKHLSESVF 197
N I+ + A + L ++L + +V + L+ + L+ G+R+
Sbjct: 141 NKISSIPAEATLYIRNLTYLDLSSNSLTTVPPEVLMSWFSPKPPLDAEGSRM-------- 192
Query: 198 FPTPNLKTLSLDGNPWCCDCHLRS---FRNWLLKSKLYSHP-LSCTEPGMLQTKHWDDVK 253
L L NPW CDC L F+ + S + L C EP L + D +
Sbjct: 193 -------ILGLHDNPWQCDCRLFDLVQFQKFPSSSVAFIDTGLRCAEPESLSGVLFSDAE 245
Query: 254 AQEFACP-PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL-LNGQVLHNSSFDLLEE 311
+ C P V + V G NV + C G P P + W +G+ ++ + + +E
Sbjct: 246 LRR--CQIPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSWARADGKPMNGT---VQQE 300
Query: 312 EEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
+ + +S+ V+ D+G+Y C A N G+A ISL
Sbjct: 301 VSKEGIIWSILSVPA--VSYRDSGKYVCKATNFVGSADAIISL 341
Score = 45 (20.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 540 FATLPRRPRSKVIEPSSLVRVGPKYDNMGPRVTAGGASILSLPDATS-TE 588
F TLP ++K +E L R+ P N R+ + +S+ S +AT+ TE
Sbjct: 602 FETLPPGTKTKGLEGEFLTRLNPDESN---RLLSARSSVDS--EATARTE 646
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 222 (83.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQIA + D F G L L L GN IT
Sbjct: 197 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 256
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 257 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 316
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 317 IQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRC 373
Score = 216 (81.1 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 59/212 (27%), Positives = 100/212 (47%)
Query: 48 ALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTIL 107
A P + V++ + K+S + + +S L L I E FK L+ L
Sbjct: 398 ACPHKCRCEASVVECSGLKLSKIPERIPQSTTELRLNN---NEISILEA-TGLFKKLSHL 453
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
+++LS+N+++ + TF G + L+L N + +R+G F L L+T+ L++ +I
Sbjct: 454 KKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISC 513
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
+H D+ L + L+L N + +S F L TL+L NP+ C+C L +WL
Sbjct: 514 IHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLR 573
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
K K+ + C P L+ DV +F C
Sbjct: 574 KRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 605
Score = 180 (68.4 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ ++ + C + +P + L LNNN+IS L FK + +
Sbjct: 399 CPHKCRCEASVVE----CSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS--H 452
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ TF+ T + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 453 LKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRIS 512
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L I ++ A L AL +LNL N + +
Sbjct: 513 CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWL 572
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 573 RKRKIVTGNPRC 584
Score = 165 (63.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 45/148 (30%), Positives = 65/148 (43%)
Query: 112 LSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD 171
L+ NQ+ L + F N L L L+ N + + F LK ++L QI + +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL 231
A L LE L LN N + + S F P L+T L N CDCHL WL +
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPT 121
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
C+ P L+ + +V+ EF+C
Sbjct: 122 IGLFTQCSGPASLRGLNVAEVQKSEFSC 149
Score = 159 (61.0 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 672 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVS 731
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 732 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCAGPPEMEGKL 789
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP++ ++
Sbjct: 790 LLTTPAKKFECQGPPSLAVQ 809
Score = 99 (39.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LYL+GN T L GQ YL+ ++L + +I S+ + +++ L +L L+ N L+ +
Sbjct: 652 LYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 710
Query: 194 ESVFFPTPNLKTLSLDGN 211
F +L+ LSL GN
Sbjct: 711 PLAFQGLRSLRLLSLHGN 728
Score = 84 (34.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L NKI+ L + F GL LQ + L + I + D F+ L L + L DN+I
Sbjct: 248 LVLYGNKITDLPRGVFG--GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQS 305
Query: 120 LHQDTFLGNDRLKVLYLNGNP 140
L + TF ++ L+L NP
Sbjct: 306 LAKGTFTSLRAIQTLHLAQNP 326
Score = 73 (30.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 49 LPSTLDSDIQVL---DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLT 105
LP L + Q L DL+ N + + ++AF+ G +L+ + L + I + F+ L
Sbjct: 10 LPELLFQNNQALSRLDLSENSLQAVPRKAFR--GATDLKNLQLDKNQISCIEEGAFRALR 67
Query: 106 ILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN 139
L + L++N I + +F +L+ L+ N
Sbjct: 68 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 101
Score = 70 (29.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L LN NKI+ + +AF+ + L+L +Y ++ I+ + + TF L + Q
Sbjct: 269 LQLLLLNANKINCIRPDAFQDLQNLSLLSLY--DNKIQSLAKGTFTSLRAI--------Q 318
Query: 117 IAWLHQDTFLGNDRLKVL--YLNGNPI 141
L Q+ F+ + LK L +L NPI
Sbjct: 319 TLHLAQNPFICDCNLKWLADFLRTNPI 345
Score = 66 (28.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+D++ L L+ N+IS + + AF++ L L+ + L N+ I + +F ++ L L
Sbjct: 43 TDLKNLQLDKNQISCIEEGAFRA--LRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 100
Query: 115 NQI------AWLHQ 122
N + AWL Q
Sbjct: 101 NHLFCDCHLAWLSQ 114
Score = 43 (20.2 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYL 88
++ +L L +NKI L K F S L +Q ++L
Sbjct: 292 NLSLLSLYDNKIQSLAKGTFTS--LRAIQTLHL 322
>RGD|1306550 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1306550
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099859 EMBL:CH473951 CTD:84189 OMA:YFELKAN
OrthoDB:EOG4X0MRT IPI:IPI00205859 RefSeq:NP_001099527.1
UniGene:Rn.99063 Ensembl:ENSRNOT00000038433 GeneID:290467
KEGG:rno:290467 UCSC:RGD:1306550 NextBio:631101 Uniprot:D3ZP44
Length = 840
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 70/245 (28%), Positives = 110/245 (44%)
Query: 24 CPDTCRCKWTLGKKSAL--CKDANFTALPSTLDS---DIQVLDLNNNKISYLTKEAFKSI 78
CP C CK L L C++ N ++ S L + + L L N I L K +
Sbjct: 328 CPVPCNCK-VLSPSGLLIHCQERNIESV-SDLQPPPHNPRKLILAGNIIHTLMKADL--M 383
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+ ++L N+ I + +F LT L ++ L+ N + L++ FLG L+ LYL
Sbjct: 384 DYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEY 443
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N + E+ G F +P LK + L + +H + + + L +NL N+ HL S
Sbjct: 444 NAVKEILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNIL 502
Query: 199 PTPNLKT-LSLDGNPWCCDCHLRSFRNWLLK-SK-LYSHPLSCTEPGMLQTKHWDDVKAQ 255
+L + L+ NPW C C L + W+ K K + + C PG L K + +
Sbjct: 503 DDLDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELKALNS- 561
Query: 256 EFACP 260
E CP
Sbjct: 562 ELLCP 566
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 66/242 (27%), Positives = 104/242 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
C C C+ G C++ L S S L L NN ++ L F GL
Sbjct: 31 CDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFHLSLLNNGLTTLHTNDFS--GLT 88
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N I+L + I ++ F L +L ++ ++ N + L +DTF G + L+ L + N I
Sbjct: 89 NALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFI 148
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-T 200
T + F KL LK + L I S+ + + L L+L GN+L+ L F
Sbjct: 149 TVIEQSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGFLEHI 207
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L+ N W C+C L +NWL + + + C P + + +K +E
Sbjct: 208 GRILDLQLEDNKWACNCELLQLKNWLENMPPQSIIGDVICYSPPLFKGSILSRLK-KESI 266
Query: 259 CP 260
CP
Sbjct: 267 CP 268
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 219 (82.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 74/245 (30%), Positives = 107/245 (43%)
Query: 24 CPDTCRCKWTLGKKSAL--CKDANFTALPSTLDSDIQ---VLDLNNNKISYLTKEAFKSI 78
CP C CK L L C++ N +L S L Q L L N I L K +
Sbjct: 331 CPIPCNCK-VLSPSGLLIHCQERNIESL-SDLKPPPQNPRKLILAGNIIHTLLKSDL--V 386
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+ ++L N+ I + +F LT L ++ L+ N + L FLG L+ LYL
Sbjct: 387 EYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEY 446
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N + E+ G F +P LK + L + + V + L +NL N+ HL S
Sbjct: 447 NGVKEILPGTFNPMPKLKVLYLNN-NLLQVLPPHIFSGVPLTRINLKTNQFTHLPVSNIL 505
Query: 199 PTPNLKT-LSLDGNPWCCDCHLRSFRNWLLK-SK-LYSHPLSCTEPGMLQTKHWDDVKAQ 255
+L T + L+ NPW C C L + W+ K SK + + CT P L K + +
Sbjct: 506 DDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDEILCTSPEHLHKKELKALNS- 564
Query: 256 EFACP 260
E CP
Sbjct: 565 ELLCP 569
Score = 193 (73.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 65/242 (26%), Positives = 102/242 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
C C C+ G C++ L S S L L NN ++ L F GL
Sbjct: 33 CDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFHLSLLNNGLTVLHTNDFS--GLT 90
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N I+L + I ++ F L +L ++ ++ N + L +DTF G + L+ L + N I
Sbjct: 91 NAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFI 150
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-T 200
T + F KL LK + L I S+ + + L L+L GN+L+ L F
Sbjct: 151 TVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGFLEHI 209
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L+ N W C+C L + WL + + + C P + +K +E
Sbjct: 210 GRILDLQLEDNKWACNCDLLQLKLWLENMPPQSVIGDVVCNSPPFFKGSILSRLK-KESI 268
Query: 259 CP 260
CP
Sbjct: 269 CP 270
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 214 (80.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 61/201 (30%), Positives = 95/201 (47%)
Query: 57 IQVLDL-NNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LD+ +N+ + ++ AF+ GL L ++L G+ E+ F+ L L + L DN
Sbjct: 107 LEELDIGDNSNLRIISPTAFR--GLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDN 164
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ LH+DTFL L L+L+ N I + L L + L +I V + A
Sbjct: 165 NLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFND 224
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
L+ L +L L N L L+ P +L+ L L+GN W CDC R +W + K S
Sbjct: 225 LSKLTTLFLFFNNLTMLTGESMNPLVSLQYLRLNGNQWICDCRARPLWDWFKRFKGSSSD 284
Query: 236 LSCTEPGMLQTKHWDDVKAQE 256
L C P L K +K+ +
Sbjct: 285 LECHLPASLNGKDLKRLKSDD 305
Score = 174 (66.3 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 50/194 (25%), Positives = 94/194 (48%)
Query: 19 PDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
P CP C C ++ K + C+ ++P+ + Q + L +NK++ + +F S+
Sbjct: 22 PVINSCPAKCVC-YSEPKATVACQQQGLFSIPTEIPVRSQRIFLQSNKLTVVRSTSFSSV 80
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYLN 137
NL +++ ++ I + F L L E+D+ DN + + F G +L L+L+
Sbjct: 81 H--NLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGLTKLHTLHLH 138
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
++EL G F L L+ + LQ + ++H+D + L L L L+ N++K +++ +
Sbjct: 139 RCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHML 198
Query: 198 FPTPNLKTLSLDGN 211
NL L L N
Sbjct: 199 RGLVNLDRLLLHQN 212
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 83/324 (25%), Positives = 143/324 (44%)
Query: 45 NFTALPSTLDSDIQ---VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
N TA+P+ S ++ L L + I+ + AFK L +L+ + + + ++
Sbjct: 188 NLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKR--LFHLKNLEIDYWPLLDLMPANS 245
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
Y L + +++ ++ + F L L L+ NPI+ + AG F L L+ + +
Sbjct: 246 LYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRS 221
Q+ ++ + L L LN++ N L+ L E+VF L+ LS++ NP CDC L
Sbjct: 306 GAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLL- 364
Query: 222 FRNWLLKSK--LY---SHPLSCTEPGMLQTKHWDDVKAQE----FACP-PNVTIKESM-V 270
WLL+ + L P+ C P ++ + + D + F C P + K+ +
Sbjct: 365 ---WLLQRQPNLQFGGQQPM-CAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL 420
Query: 271 IREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVT 330
+ + G V + C GDP+P I W V F + + G A ++ +
Sbjct: 421 LVDEGQTVQLECNADGDPQPVISW-----VTPRRRF-ITTKSNGRATVLGDGTLEIRFAQ 474
Query: 331 DLDAGEYTCYAENIRGNASGEISL 354
D D+G Y C A N GN + SL
Sbjct: 475 DQDSGMYVCIASNAAGNDTFTASL 498
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ +DL++N I+ + AF + L NL+ + LK + ++ V F L+ L ++D+S+N+
Sbjct: 83 LEEIDLSDNIIANVEPGAFNN--LFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENK 140
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + +V +AL HL
Sbjct: 141 IVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHL 200
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+L +L+L + ++ F +LK L +D
Sbjct: 201 RSLIALHLKHLNINNMPVYAFKRLFHLKNLEID 233
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/161 (27%), Positives = 70/161 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + KS C A+P + + ++LDL+ N++ + E F S LL
Sbjct: 28 CPARCEC--SAQNKSVSCHRRRLLAIPEGIPIETKILDLSKNRLKSINPEEFISYPLL-- 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ I L ++ I V F L L + L N++ + F G L L ++ N I
Sbjct: 84 EEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVI 143
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L F L LK++E+ + + A L +LE L L
Sbjct: 144 LLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTL 184
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 217 (81.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 87/318 (27%), Positives = 144/318 (45%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
D NF L ++++ L L +++ + AF +GL NL+ + ++ + V + +
Sbjct: 209 DLNFKPL-----TNLRSLVLAGMELTDIPGNAF--VGLDNLESLSFYDNKLVRVPQTALQ 261
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG-NPITELRAGQFPKLPYLKTIELQ 161
L L +DL+ N I + + F RLK L +N + + LP L +E
Sbjct: 262 KLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSIDRFALDNLPELTKLEAT 321
Query: 162 HCQIHS-VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ S V + A L ALESL LN N L L ++ PNL+ +S+ NP CDC ++
Sbjct: 322 NNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREISIHSNPLRCDCVIQ 381
Query: 221 SFRNWLLKSKL---YSHPLS--CTEPGMLQTKHWDDVKAQEFA--CPPNV---TIKESMV 270
W+ +K + PLS CT P ++ + DV ++E + C P + T +
Sbjct: 382 ----WMSSNKTTIRFMEPLSMFCTMPIEVRGQRVRDVFSREPSGQCLPMISHDTFPNHLN 437
Query: 271 IREAGGNVTMSCYVYGDPEPTILWLL--NGQVLHNSSFDLLEEEEGDALFEKSVSITLFN 328
+ + G V + C +PEP I W+ +V+ ++ D + L I+
Sbjct: 438 L-DIGMTVDLDCRAMAEPEPEIYWVTPSGNKVMMDTVSDKYQLNSAGTL-----RISYIQ 491
Query: 329 VTDLDAGEYTCYAENIRG 346
V D +G YTC A+N G
Sbjct: 492 VDD--SGHYTCVAQNTEG 507
Score = 159 (61.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 44/169 (26%), Positives = 80/169 (47%)
Query: 44 ANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
+N + T S + L L N+I + F L NLQ +Y+ ++ I + + F
Sbjct: 109 SNIRDIGLTNMSQLTTLHLEENQIVEMPD--FSLQDLTNLQELYINHNQISSIAPNAFAG 166
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L L+ + L+ N++ + F L++L + NP+ + F L L+++ L
Sbjct: 167 LRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGM 226
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
++ + +A + L LESL+ N+L + ++ PNLK L L+ NP
Sbjct: 227 ELTDIPGNAFVGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNP 275
Score = 156 (60.0 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 22 TDCPDTCRCK---W-----TLGKKSAL-CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
T+CP C C+ W T + + + C D + T +P L +D QVL L +N I+ ++
Sbjct: 31 TECPQLCVCEIRPWFTPQSTYREATTVDCNDLHLTRIPGNLSADTQVLLLQSNYIARTSE 90
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
E + + L L S IR++ LT L L +NQI + + L+
Sbjct: 91 ELEQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTL---HLEENQIVEMPDFSLQDLTNLQ 147
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
LY+N N I+ + F L L + L ++ ++ LE L + N + +
Sbjct: 148 ELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGI 207
Query: 193 SESVFFPTPNLKTLSLDG 210
+ F P NL++L L G
Sbjct: 208 LDLNFKPLTNLRSLVLAG 225
Score = 141 (54.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 47/164 (28%), Positives = 75/164 (45%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P + + +D N+ ++ + +L LQ Y+ + + + L L E
Sbjct: 47 PQSTYREATTVDCNDLHLTRIPGNLSADTQVLLLQSNYIARTS------EELEQLLNLTE 100
Query: 110 VDLSDNQIAWLHQDTFLGN-DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSV 168
+DLS N + + +D L N +L L+L N I E+ L L+ + + H QI S+
Sbjct: 101 LDLSQNNFSNI-RDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSI 159
Query: 169 HKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+A L L L+LN NRLK + F TPNL+ L + NP
Sbjct: 160 APNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENP 203
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+++Q L +N+N+IS + AF GL NL R++L ++ ++ + F+ L + + +
Sbjct: 144 TNLQELYINHNQISSIAPNAFA--GLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGE 201
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N + + F L+ L L G +T++ F L L+++ ++ V + AL
Sbjct: 202 NPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYDNKLVRVPQTALQ 261
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
L L+ L+LN N + + E F LK L ++
Sbjct: 262 KLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 296
Score = 38 (18.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 540 FATLPRRPRSKVIEPS--SLVRVGPK-YDNMGPRVTAGGASILSLPDATSTE 588
F L + P K+ E +++R+ +NMG V+ ++ +LP+ T E
Sbjct: 268 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSIDRFALDNLPELTKLE 319
>UNIPROTKB|A6NDA9 [details] [associations]
symbol:LRIT2 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR020901
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:AC022389 CTD:340745 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
EMBL:BX648524 IPI:IPI01015843 RefSeq:NP_001017924.1
UniGene:Hs.450425 ProteinModelPortal:A6NDA9 SMR:A6NDA9 PRIDE:A6NDA9
Ensembl:ENST00000372113 GeneID:340745 KEGG:hsa:340745
UCSC:uc001kcy.3 GeneCards:GC10M085971 HGNC:HGNC:23443 HPA:HPA037788
neXtProt:NX_A6NDA9 PharmGKB:PA162394344 eggNOG:NOG331103
InParanoid:A6NDA9 GenomeRNAi:340745 NextBio:98010
ArrayExpress:A6NDA9 Bgee:A6NDA9 CleanEx:HS_LRIT2
Genevestigator:A6NDA9 Uniprot:A6NDA9
Length = 550
Score = 215 (80.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 82/352 (23%), Positives = 143/352 (40%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
C C C ++ C + +P L + + + + N+ + + + +F I + L
Sbjct: 24 CLPGCTCSEESFGRTLQCTSVSLGKIPGNLSEEFKQVRIENSPLFEMPQGSF--INMSTL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ ++L + I +H ++L L E+ L N++ + F L+VL L N I
Sbjct: 82 EYLWLNFNNISVIHLGALEHLPELRELRLEGNKLCSVPWTAFRATPLLRVLDLKRNKIDA 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L L L ++L ++ V K ++ A + + LS V
Sbjct: 142 LPELALQFLVSLTYLDLSSNRLTVVSKSVFLNWPAYQKCRQPDCGAEILSSLV------- 194
Query: 204 KTLSLDGNPWCCDCHLRSFRNWL----LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++L NPW CDC LR ++ L L + L C P + + + + AC
Sbjct: 195 --VALHDNPWVCDCRLRGLVQFVKSITLPVILVNSYLICQGPLSKAGQLFHETELS--AC 250
Query: 260 -PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALF 318
P ++ + + AG NVT+ C P P+I W + FD+L G+
Sbjct: 251 MKPQISTPSANITIRAGQNVTLRCLAQASPSPSIAWTYPLSMWRE--FDVLTSSTGEDTA 308
Query: 319 EKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTDS 370
++I ++ +D+G YTC A N G ++ ISL + A L DS
Sbjct: 309 LSELAIPAAHL--VDSGNYTCMASNSIGKSNLVISL---HVQPAQALHAPDS 355
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 212 (79.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 45 NFTAL-PSTLD--SDIQVLDLNNNK-ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
N +A+ P T ++ LDL +N+ + L + F+ GL LQ ++L + +
Sbjct: 90 NLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQLSSLPGTI 147
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F+ L L + L +N + L D F L L+L+GN + L F L L + L
Sbjct: 148 FRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLL 207
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
++ VH+ A L L L L N L L P+L+ L L+ NPW CDC R
Sbjct: 208 HGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALADLPSLEFLRLNANPWACDCRAR 267
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF-ACPP 261
W ++++ S ++C P + + ++ +F ACPP
Sbjct: 268 PLWAWFQRARVSSSDVTCASPPERRGRDLRALREADFQACPP 309
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/195 (33%), Positives = 95/195 (48%)
Query: 18 SPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKS 77
+P CP C C + C+ NF+A+P L Q L L NN I L +F
Sbjct: 22 APAAARCPMLCTCY--PAPPTVSCQANNFSAVPRALPPGTQRLFLQNNLIGALRPGSFGP 79
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ-IAWLHQDTFLGNDRLKVLYL 136
LL L +L ++ + ++ TF++L L E+DL DN+ + L DTF G +RL+ L+L
Sbjct: 80 -SLLTL---WLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHL 135
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESV 196
++ L F L L+ + LQ + + D L L L L+GNRL+ L+E V
Sbjct: 136 YRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHV 195
Query: 197 FFPTPNLKTLSLDGN 211
F +L L L GN
Sbjct: 196 FRGLGSLDRLLLHGN 210
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 212 (79.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 81/327 (24%), Positives = 147/327 (44%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 110 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 167
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN +T +R G F L +L+ +
Sbjct: 168 GAFEGLSNLRYLNLAMCNLREIPNLTPLV--KLDELDLSGNHLTAIRPGSFQGLMHLQKL 225
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P L+ + L NPW C+C
Sbjct: 226 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHLHHNPWNCNCD 284
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W +K K S+ C P L+ ++ ++ F C V ++ +
Sbjct: 285 IL-WLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADLNVTE 343
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G M C ++ W+ NG V+ + ++ + L + +++ T VT D
Sbjct: 344 GMAAEMKCRA-STSLTSVSWITPNGSVMTHGAYRVRIA----VLSDGTLNFT--KVTVQD 396
Query: 334 AGEYTCYAENIRGNASGEISLDLPEIN 360
G YTC N GN + +L++ ++
Sbjct: 397 TGLYTCMVSNSVGNTTASATLNVTALD 423
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 24 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 79
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 80 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 139
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 140 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLVK 197
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 198 LDELDLSGN 206
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 213 (80.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 87/318 (27%), Positives = 135/318 (42%)
Query: 45 NFTALPS-TLDS--DIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGI-REVHRD 99
N TAL +L + L L + I+ L + F+ + GLL+L+ + N + EV
Sbjct: 185 NLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLE---IDNWPLLEEVAAG 241
Query: 100 TFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIE 159
+ + L L + ++ I + L L L+ NPI+ + G F L L+ +
Sbjct: 242 SLRGLN-LTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH 300
Query: 160 LQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHL 219
L + V A + L + LNL+ N L L ES F L+TL +DGNP CDC L
Sbjct: 301 LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRL 360
Query: 220 RSFRNWLL---KSKLYSHPL-SCTEPGMLQTKHW----DDVKAQEFAC-PPNVTIKE-SM 269
W++ K+ + L +C P ++ D V + F C P + +
Sbjct: 361 L----WIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQR 416
Query: 270 VIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNV 329
V AG +V C G+P PT+ W+ Q H + G A ++ + +
Sbjct: 417 VTATAGEDVRFLCRAEGEPAPTVAWV-TPQ--HRP---VTATSAGRARVLPGGTLEIQDA 470
Query: 330 TDLDAGEYTCYAENIRGN 347
D+G YTC A N GN
Sbjct: 471 RPQDSGTYTCVASNAGGN 488
Score = 139 (54.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 51/202 (25%), Positives = 92/202 (45%)
Query: 34 LGKKSALCKD-ANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSG 92
L + C + + ALP+ ++ LDL+ N I+++ AF ++ L + R L+ +
Sbjct: 61 LSRNRIRCLNPGDLAALPA-----LEELDLSENAIAHVEPGAFANLPRLRVLR--LRGNQ 113
Query: 93 IREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKL 152
++ + F L L +DLS+N++ L TF L+ L + N + + F L
Sbjct: 114 LKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGL 173
Query: 153 PYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L+ + L+ C + ++ ++L HL +L +L L + L + F P L L +D P
Sbjct: 174 LALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWP 233
Query: 213 WCCDCHLRSFRNWLLKSKLYSH 234
+ S R L S +H
Sbjct: 234 LLEEVAAGSLRGLNLTSLSVTH 255
Score = 137 (53.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 48/174 (27%), Positives = 77/174 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C T+ ++ C TA+P + ++ ++L+L+ N+I L ++ L
Sbjct: 25 CPARCEC--TVQTRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPAL-- 80
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I V F L L + L NQ+ + F D L +L L+ N +
Sbjct: 81 EELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVI 140
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS-ESV 196
L F L L+ +E+ + V + A L ALE L L L LS ES+
Sbjct: 141 LLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESL 194
Score = 47 (21.6 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 529 VGTGPGTNPAYFATLPRRP 547
V + G N YFATL RP
Sbjct: 481 VASNAGGNDTYFATLTVRP 499
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 84/316 (26%), Positives = 137/316 (43%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + L+ L LK + + F+ L L ++L
Sbjct: 146 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK--LEYISEGAFEGLFNLKYLNLG 203
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
I + T L L+ L ++GN E+R G F L LK + + + Q+ + ++A
Sbjct: 204 MCNIKDMPNLTPLVG--LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 261
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +L LNL N L L +F P L L L NPW CDC + + W L+ + +
Sbjct: 262 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL-WLAWWLREYIPT 320
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFAC--PPNVTIKESMVIREAGGNVTMSCYVYGDP 288
+ C P ++ ++ +V F C P + + I E + C P
Sbjct: 321 NSTCCGRCHAPMHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISE-DRMAELKCRT--PP 377
Query: 289 EPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
++ WLL NG VL ++S L + +++ + V +D G YTC N+ GN
Sbjct: 378 MSSVKWLLPNGTVLSHAS----RHPRISVLNDGTLNFS--RVLLIDTGVYTCMVTNVAGN 431
Query: 348 ASGEISLDLPEINLAT 363
++ L++ L T
Sbjct: 432 SNASAYLNVSSAELNT 447
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 47/190 (24%), Positives = 86/190 (45%)
Query: 23 DCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
+CP C C K +C + +P + S+ + L+L N I + + F+ L +
Sbjct: 44 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRH--LHH 99
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L+ + L + IR++ F L L ++L DN + + F +L+ L+L NPI
Sbjct: 100 LEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 143 ELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ + F ++P L ++L + + + + A L L+ LNL +K + P
Sbjct: 160 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLV 217
Query: 202 NLKTLSLDGN 211
L+ L + GN
Sbjct: 218 GLEELEMSGN 227
>UNIPROTKB|I3LFJ7 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:CU582950
Ensembl:ENSSSCT00000023085 Uniprot:I3LFJ7
Length = 477
Score = 212 (79.7 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 62/202 (30%), Positives = 98/202 (48%)
Query: 43 DANFTALPSTLD--SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
D F +P L +++ L ++I + + +GL L+ + L+ + +R VH
Sbjct: 164 DNLFRRVPGALRGLANLTHAHLERSRIEAVASSSL--LGLRRLRSLSLQANRVRTVHGGA 221
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F+ L + L+DN +A L D F G L+ L L GN + + F +L L+ + L
Sbjct: 222 FRDCGSLEHLLLNDNLLAALPADAFHGLRHLRTLNLGGNALGRVARAWFAELAELELLYL 281
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
I V + A +L+ L +L+LNGN L L+ + F P L L L NPW CDC L
Sbjct: 282 DRNSIAFVEEGAFQNLSGLLALHLNGNHLTMLAWAAFQPGFFLGHLFLFRNPWRCDCRLE 341
Query: 221 SFRNWLLKSKLYSHPLSCTEPG 242
R+W+ +S + + C PG
Sbjct: 342 WLRDWM-ESFGRAADVPCASPG 362
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 49/189 (25%), Positives = 84/189 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C S C A +P+ + +DL+ N + +L + AF + L +L
Sbjct: 27 CPAACVCSSVERGCSVRCDRAGLLRVPAEFPCEAASIDLDRNGLRFLGERAFGT--LPSL 84
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+R+ L+++ + + FK L L E+ L+ N + +LH TF RL+ L L +
Sbjct: 85 RRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALGRLRRLDLAACRLF 144
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ +LP L+ + V AL L L +L +R++ ++ S
Sbjct: 145 SVPERLLAELPALRELAAFDNLFRRV-PGALRGLANLTHAHLERSRIEAVASSSLLGLRR 203
Query: 203 LKTLSLDGN 211
L++LSL N
Sbjct: 204 LRSLSLQAN 212
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 219 (82.2 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 55/177 (31%), Positives = 90/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQI+ + D F G L L L GN IT
Sbjct: 173 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIT 232
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ + DA L L L+L N+++ L++ F
Sbjct: 233 DLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRA 292
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L+ ++L + + + C P L K +K+++F C
Sbjct: 293 IQTLHLAQNPFICDCNLKWLADFLRSNPIETSGARCASPRRLANKRIGQIKSKKFRC 349
Score = 217 (81.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 49/159 (30%), Positives = 83/159 (52%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK LT L +++LS+N+++ + F G + L+L N + +R+G F L L+T+ L
Sbjct: 423 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLML 482
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
++ +I +H D+ L + L+L N++ +S F L TL+L NP+ C+C L
Sbjct: 483 RNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLA 542
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+WL K K+ + C P L+ DV + +F C
Sbjct: 543 WLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVASPDFRC 581
Score = 176 (67.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ ++ + C T +P + L LNNN+IS L FK L +
Sbjct: 375 CPHKCRCEASMVE----CSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKK--LTH 428
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ F+ + E+ L+ NQ+ + F G + L+ L L N I+
Sbjct: 429 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRIS 488
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L AL +LNL N + +
Sbjct: 489 CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWL 548
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 549 RKRKIVTGNPRC 560
Score = 162 (62.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 648 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDIS 707
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR +W+ Y P C P ++ K
Sbjct: 708 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTG--YKEPGIARCAGPLDMEGKL 765
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP +T++
Sbjct: 766 LLTTPAKKFECQGPPTLTVQ 785
Score = 161 (61.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 59/191 (30%), Positives = 85/191 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ TA+P+ L + + L N I + AF L
Sbjct: 144 CPAMCACSNGIVD----CRGKGLTAIPANLPEAMTEIRLELNGIKSIPPGAFSPYR--KL 197
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F+ L L + L N+I L Q F G L++L LN N I
Sbjct: 198 RRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINC 257
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+R F L L + L +I S+ K L A+++L HL+++ F NL
Sbjct: 258 IRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTL--------HLAQNPFICDCNL 309
Query: 204 KTLS--LDGNP 212
K L+ L NP
Sbjct: 310 KWLADFLRSNP 320
Score = 143 (55.4 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 38/124 (30%), Positives = 54/124 (43%)
Query: 136 LNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
L+ N I + F LK ++L QI + + A L LE L LN N + + S
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQ 255
F P L+T L N CDCHL WL + C+ P L+ + +V+
Sbjct: 62 SFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPAGLRGLNVAEVQKS 121
Query: 256 EFAC 259
EF+C
Sbjct: 122 EFSC 125
Score = 125 (49.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N I+ L A G F KL +LK I L + ++ + A ++ L+L N+L+ +
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 193 SESVFFPTPNLKTLSLDGNPWCCDCHLRSF---RNWLLKSKLYSHPLSCTEPGMLQT 246
+F L+TL L N C H SF RN L S LY + ++ PG T
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISC-IHNDSFTGLRNVRLLS-LYDNQIATISPGAFDT 521
Score = 69 (29.3 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 61 DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWL 120
DL+ N I + ++AF+ G +L+ + L + I + F+ L L + L++N I +
Sbjct: 1 DLSENTIQAIPRKAFR--GATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTI 58
Query: 121 HQDTFLGNDRLKVLYLNGN 139
+F +L+ L+ N
Sbjct: 59 PVSSFNHMPKLRTFRLHSN 77
Score = 62 (26.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+D++ L L+ N+I + + AF++ L L+ + L N+ I + +F ++ L L
Sbjct: 19 TDLKNLQLDKNQIGCIEEGAFRA--LRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS 76
Query: 115 NQI------AWLHQ 122
N + AWL Q
Sbjct: 77 NHLFCDCHLAWLSQ 90
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 214 (80.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 82/331 (24%), Positives = 149/331 (45%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 133 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 190
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN ++ +R G F L +L+ +
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIPNLTPL--IKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P +L+ + L NPW C+C
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 308
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W +K S+ C P L+ ++ ++ F C V ++ +
Sbjct: 309 IL-WLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTE 367
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C ++ W+ NG V+ + ++ + L + +++ T NVT D
Sbjct: 368 GMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIA----VLSDGTLNFT--NVTVQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATT 364
G YTC N GN + +L+ + ATT
Sbjct: 421 TGMYTCMVSNSVGNTTASATLN---VTAATT 448
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 102
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 163 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLIK 220
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 221 LDELDLSGN 229
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 82/331 (24%), Positives = 149/331 (45%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 133 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 190
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN ++ +R G F L +L+ +
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIPNLTPLV--KLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P +L+ + L NPW C+C
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 308
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W +K S+ C P L+ ++ ++ F C V ++ +
Sbjct: 309 IL-WLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTE 367
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C ++ W+ NG V+ + ++ + L + +++ T NVT D
Sbjct: 368 GMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIA----VLSDGTLNFT--NVTVQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATT 364
G YTC N GN + +L+ + ATT
Sbjct: 421 TGMYTCMVSNSVGNTTASATLN---VTAATT 448
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 102
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 163 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLVK 220
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 221 LDELDLSGN 229
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 82/331 (24%), Positives = 149/331 (45%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 133 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 190
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN ++ +R G F L +L+ +
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIPNLTPL--IKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P +L+ + L NPW C+C
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 308
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W +K S+ C P L+ ++ ++ F C V ++ +
Sbjct: 309 IL-WLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTE 367
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C ++ W+ NG V+ + ++ + L + +++ T NVT D
Sbjct: 368 GMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIA----VLSDGTLNFT--NVTVQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATT 364
G YTC N GN + +L+ + ATT
Sbjct: 421 TGMYTCMVSNSVGNTTASATLN---VTAATT 448
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 102
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 163 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLIK 220
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 221 LDELDLSGN 229
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 82/331 (24%), Positives = 149/331 (45%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 133 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 190
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN ++ +R G F L +L+ +
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIPNLTPL--IKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P +L+ + L NPW C+C
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 308
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W +K S+ C P L+ ++ ++ F C V ++ +
Sbjct: 309 IL-WLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTE 367
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C ++ W+ NG V+ + ++ + L + +++ T NVT D
Sbjct: 368 GMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIA----VLSDGTLNFT--NVTVQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATT 364
G YTC N GN + +L+ + ATT
Sbjct: 421 TGMYTCMVSNSVGNTTASATLN---VTAATT 448
Score = 177 (67.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 102
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 163 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLIK 220
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 221 LDELDLSGN 229
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 214 (80.4 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 70/216 (32%), Positives = 98/216 (45%)
Query: 32 WTLGKKSALCKDANFTALPSTLDSDIQVLDLNNN-KISYLTKEAFKSIGLLNLQRIYLKN 90
W A A FT L TL ++ LDL++N ++ + F +G +L ++L
Sbjct: 87 WLHSNALARIDAAAFTGL--TL---LEQLDLSDNAQLHVVDPTTFHGLG--HLHTLHLDR 139
Query: 91 SGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQ 148
G+RE+ F+ L L + L DN + L +TF LGN L L+L+GN I +
Sbjct: 140 CGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN--LTHLFLHGNRIPSVPEHA 197
Query: 149 FPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
F L L + L + VH A L L +L L N L L V P +L+ L L
Sbjct: 198 FRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRL 257
Query: 209 DGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGML 244
+ NPW CDC R WL K + S + C P L
Sbjct: 258 NDNPWVCDCRARPLWAWLQKFRGSSSEVPCNLPQRL 293
Score = 193 (73.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 63/219 (28%), Positives = 106/219 (48%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP C C + K + C A+P+ + + Q + L+ N+IS++ +F+S
Sbjct: 25 TPCPGACVC-YNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISHVPAASFQSCR-- 81
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNP 140
NL ++L ++ + + F LT+L ++DLSDN Q+ + TF G L L+L+
Sbjct: 82 NLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCG 141
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
+ EL G F L L+ + LQ + ++ + L L L L+GNR+ + E F
Sbjct: 142 LRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 201
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLS 237
+L L L N H +FR+ L+ L+++ LS
Sbjct: 202 HSLDRLLLHQNH-VARVHPHAFRDLGRLMTLYLFANNLS 239
Score = 40 (19.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 489 HLPTSTYGNIFISVS---VSQEPPGSDPPKYP 517
H+ S +G + S + P GS+PP P
Sbjct: 378 HINDSPFGTLPSSAEPPLTALRPGGSEPPGLP 409
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 214 (80.4 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 84/316 (26%), Positives = 137/316 (43%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSI-GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLS 113
S ++ L L NN I + AF + L+ L LK + + F+ L L ++L
Sbjct: 146 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK--LEYISEGAFEGLFNLKYLNLG 203
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
I + T L L+ L ++GN E+R G F L LK + + + Q+ + ++A
Sbjct: 204 MCNIKDMPNLTPLVG--LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAF 261
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +L LNL N L L +F P L L L NPW CDC + + W L+ + +
Sbjct: 262 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL-WLAWWLREYIPT 320
Query: 234 HPLSCTE---PGMLQTKHWDDVKAQEFAC--PPNVTIKESMVIREAGGNVTMSCYVYGDP 288
+ C P ++ ++ +V F C P + + I E + C P
Sbjct: 321 NSTCCGRCHAPMHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISE-DRMAELKCRT--PP 377
Query: 289 EPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
++ WLL NG VL ++S L + +++ + V +D G YTC N+ GN
Sbjct: 378 MSSVKWLLPNGTVLSHAS----RHPRISVLNDGTLNFS--RVLLIDTGVYTCMVTNVAGN 431
Query: 348 ASGEISLDLPEINLAT 363
++ L++ L T
Sbjct: 432 SNASAYLNVSSAELNT 447
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 47/190 (24%), Positives = 86/190 (45%)
Query: 23 DCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
+CP C C K +C + +P + S+ + L+L N I + + F+ L +
Sbjct: 44 NCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRH--LHH 99
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L+ + L + IR++ F L L ++L DN + + F +L+ L+L NPI
Sbjct: 100 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 143 ELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ + F ++P L ++L + + + + A L L+ LNL +K + P
Sbjct: 160 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLT--PLV 217
Query: 202 NLKTLSLDGN 211
L+ L + GN
Sbjct: 218 GLEELEMSGN 227
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 212 (79.7 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 81/327 (24%), Positives = 147/327 (44%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 101 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 158
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN +T +R G F L +L+ +
Sbjct: 159 GAFEGLSNLRYLNLAMCNLREIPNLTPLV--KLDELDLSGNHLTAIRPGSFQGLMHLQKL 216
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P L+ + L NPW C+C
Sbjct: 217 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHLHHNPWNCNCD 275
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W +K K S+ C P L+ ++ ++ F C V ++ +
Sbjct: 276 IL-WLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADLNVTE 334
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G M C ++ W+ NG V+ + ++ + L + +++ T VT D
Sbjct: 335 GMAAEMKCRA-STSLTSVSWITPNGSVMTHGAYRVRIA----VLSDGTLNFT--KVTVQD 387
Query: 334 AGEYTCYAENIRGNASGEISLDLPEIN 360
G YTC N GN + +L++ ++
Sbjct: 388 TGLYTCMVSNSVGNTTASATLNVTALD 414
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 15 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 70
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 71 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 130
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 131 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLVK 188
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 189 LDELDLSGN 197
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 215 (80.7 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 74/247 (29%), Positives = 110/247 (44%)
Query: 24 CPDTCRCKWTLGKKSAL--CKDANFTALPSTLDS---DIQVLDLNNNKISYLTKEAFKSI 78
CP C CK L L C++ N +L S L + + L L N I L K
Sbjct: 328 CPIPCNCK-VLSPSGLLIHCQERNIESL-SDLQPPPHNPRKLILAGNIIHTLMKSDLTDY 385
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
L+ ++L N+ I + +F LT L ++ L+ N + L++ FLG L+ LYL
Sbjct: 386 --FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEY 443
Query: 139 NPITELRAGQFPKLPYLKTIELQH--CQIHSVHKDALIHLTALESLNLNGNRLKHLSES- 195
N + E+ G F +P LK + L + Q+ H I LT + NL N+ HL S
Sbjct: 444 NAVKEILPGTFNPMPKLKVLYLNNNLLQVLPAHIFLGIPLTRV---NLKTNQFTHLPVSN 500
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLK-SK-LYSHPLSCTEPGMLQTKHWDDVK 253
+ L + L+ NPW C C L + W+ K K + + CT PG L K +
Sbjct: 501 ILDDLDFLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTMTDDILCTSPGHLDKKELKALN 560
Query: 254 AQEFACP 260
+ + CP
Sbjct: 561 S-DLLCP 566
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 66/242 (27%), Positives = 103/242 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALP--STLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
C C C+ G C++ L S S L L NN ++ L F GL
Sbjct: 31 CDTLCNCEEKDGIMIINCEEKGINKLSQISVPPSRPFHLSLLNNGLTMLHTNDFS--GLT 88
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N I+L + I ++ F L +L ++ ++ N + L +DTF G + L+ L + N I
Sbjct: 89 NALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFI 148
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFP-T 200
T + F KL LK + L I S+ + + L L+L GN+L+ L F
Sbjct: 149 TIIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTLPYVGFLEHI 207
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
+ L L+ N W C+C L +NWL + + + C P + +K + F
Sbjct: 208 GRILDLQLEDNKWACNCELLQLKNWLENMPPQSIIGDVICYSPPPFKGSVLSRLKKESF- 266
Query: 259 CP 260
CP
Sbjct: 267 CP 268
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 212 (79.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 50/169 (29%), Positives = 90/169 (53%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L ++ +S + F S L +L+R++L+++ I + +F+ L L+E+DL N+++
Sbjct: 386 LHLEHSCLSKIRANTFSS--LTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSH 443
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F+G L+ L+L+ N I ++ F L L ++L H Q+ ++ + L L
Sbjct: 444 LSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANL 503
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLK 228
L+L N L+ S P+ L+ L L GN W C+C L+ R++ L+
Sbjct: 504 RYLSLRNNSLETFSVGFLCPSFTLEQLWLGGNNWHCNCSLKGLRDFALR 552
Score = 201 (75.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 52/157 (33%), Positives = 84/157 (53%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
++++ LDL+ N + + F + L LQ++YL N+ I + F + L +DLS
Sbjct: 213 TELKELDLSGNALKGIKINIF--VKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSH 270
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ L++DTFLG L VL L+ N IT LR F L +L+ ++L H +I S+ +
Sbjct: 271 NRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFD 330
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L LE L+LN N+L+ + F N+ + L N
Sbjct: 331 GLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSAN 367
Score = 179 (68.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 24 CPDTCRCKWT--LGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
CP C C + + C N T LP ++ + + L+ N + L AF+++ L
Sbjct: 36 CPSPCACSLDDYSEELNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAFRNLSGL 95
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+ + L++S + V + F L L + L N++ +L TFL L L LN N
Sbjct: 96 DF--LDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLF 153
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH-LTALESLNLNGNRLKHLSESVFFPT 200
+++ G F L L + L + V D + H L L L L GN+L +L +F
Sbjct: 154 SKVEEGLFAGLSNLWYLNLGWNSL-VVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSL 212
Query: 201 PNLKTLSLDGN 211
LK L L GN
Sbjct: 213 TELKELDLSGN 223
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 53/171 (30%), Positives = 86/171 (50%)
Query: 45 NFTAL-PSTLDSDIQVLD---LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
+ T+L P T D+Q L+ L +N+I L + F +G L + + L N+ ++++
Sbjct: 296 SITSLRPRTF-KDLQFLEELQLGHNRIWSLAERTFDGLGQLEV--LSLNNNQLQDIKAGA 352
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
F L + + LS N I L + F G +L L+L + ++++RA F L L+ + L
Sbjct: 353 FLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFL 412
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
QH I ++ + L L L+L NRL HLS +F NL+ L L N
Sbjct: 413 QHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFN 463
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 57/184 (30%), Positives = 93/184 (50%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDL++N+++ L ++ F +GLL+L + L + I + TFK L L E+ L N+I
Sbjct: 266 LDLSHNRLTSLYEDTF--LGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWS 323
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + TF G +L+VL LN N + +++AG F L + + L I ++ + +T L
Sbjct: 324 LAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKL 383
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLS 237
SL+L + L + + F +L+ L L N +SFR LL+ L + LS
Sbjct: 384 HSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNA-ISTIEDQSFRELHELLELDLKHNRLS 442
Query: 238 CTEP 241
P
Sbjct: 443 HLSP 446
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 56/205 (27%), Positives = 95/205 (46%)
Query: 12 CLGT--TGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLD---SDIQVLDLNNNK 66
C G T PD D P + W G NFT LP+ S + LDL +++
Sbjct: 55 CSGRNLTQLPD--DFPTNAKAIWLDGN--------NFTQLPAAAFRNLSGLDFLDLQSSQ 104
Query: 67 ISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFL 126
++ + + AF GL +L ++L+ + ++ + TF + LV + L++N + + + F
Sbjct: 105 LAAVEQHAFH--GLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFA 162
Query: 127 GNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNG 186
G L L L N + L F LP L+ + L ++ + LT L+ L+L+G
Sbjct: 163 GLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSG 222
Query: 187 NRLKHLSESVFFPTPNLKTLSLDGN 211
N LK + ++F L+ L L+ N
Sbjct: 223 NALKGIKINIFVKLQKLQKLYLNNN 247
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S++ L+L N + L + F L NL+ + L + + + F LT L E+DLS
Sbjct: 165 SNLWYLNLGWNSLVVLPDKVFHD--LPNLRELILAGNKLPYLQHQLFCSLTELKELDLSG 222
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N + + + F+ +L+ LYLN N I + F + L+ ++L H ++ S+++D +
Sbjct: 223 NALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFL 282
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSH 234
L +L L L+ N + L F L+ L L N R W L + +
Sbjct: 283 GLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHN-----------RIWSLAERTFDG 331
Query: 235 PLSCTEPGMLQTKHWDDVKAQEFACPPNVTI 265
L E L D+KA F NV +
Sbjct: 332 -LGQLEVLSLNNNQLQDIKAGAFLGLYNVAV 361
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L LNNN+I+ + AF +G+ +L+ + L ++ + ++ DTF L L + LS N
Sbjct: 239 LQKLYLNNNQINAIAPRAF--MGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNS 296
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L TF L+ L L N I L F L L+ + L + Q+ + A + L
Sbjct: 297 ITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGL 356
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+ ++L+ N +K L E VF L +L L+
Sbjct: 357 YNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLE 389
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 42/155 (27%), Positives = 81/155 (52%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++VL LNNN++ + AF +GL N+ ++L + I+ + F+ +T L + L +
Sbjct: 335 LEVLSLNNNQLQDIKAGAF--LGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSC 392
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
++ + +TF L+ L+L N I+ + F +L L ++L+H ++ + + L
Sbjct: 393 LSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGL 452
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ LE L L+ N++ +S++ F P L L L N
Sbjct: 453 SNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHN 487
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/152 (30%), Positives = 74/152 (48%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L LNNN S + + F GL NL + L + + + F L L E+ L+ N++ +
Sbjct: 146 LSLNNNLFSKVEEGLFA--GLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPY 203
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F LK L L+GN + ++ F KL L+ + L + QI+++ A + + +L
Sbjct: 204 LQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSL 263
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+L+ NRL L E F +L L L N
Sbjct: 264 RWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTN 295
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ V+ L+ N I L + F+ G+ L ++L++S + ++ +TF LT L + L N
Sbjct: 358 NVAVMHLSANCIKTLPEYVFE--GVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHN 415
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I+ + +F L L L N ++ L F L L+ + L QI + ++
Sbjct: 416 AISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSP 475
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L L+L+ N+L L +V NL+ LSL N
Sbjct: 476 LRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNN 511
>UNIPROTKB|Q9P2V4 [details] [associations]
symbol:LRIT1 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 1" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISS] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030176 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 EMBL:AB031547 EMBL:AL080175 IPI:IPI00024059
PIR:T12497 RefSeq:NP_056428.1 UniGene:Hs.226000
ProteinModelPortal:Q9P2V4 SMR:Q9P2V4 PhosphoSite:Q9P2V4
DMDM:37081671 PaxDb:Q9P2V4 PRIDE:Q9P2V4 DNASU:26103
Ensembl:ENST00000372105 GeneID:26103 KEGG:hsa:26103 UCSC:uc001kcz.1
CTD:26103 GeneCards:GC10M085982 HGNC:HGNC:23404 HPA:HPA014296
neXtProt:NX_Q9P2V4 PharmGKB:PA162394331 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 InParanoid:Q9P2V4
OMA:RRINEYF OrthoDB:EOG42JNR2 PhylomeDB:Q9P2V4 GenomeRNAi:26103
NextBio:48099 Bgee:Q9P2V4 CleanEx:HS_LRIT1 Genevestigator:Q9P2V4
GermOnline:ENSG00000148602 Uniprot:Q9P2V4
Length = 623
Score = 212 (79.7 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 83/349 (23%), Positives = 145/349 (41%)
Query: 24 CPDTCRCKWTL---GKKS--ALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI 78
CP C C + G K+ +C D + T P+++ D L L I + EAF+ +
Sbjct: 23 CPSQCSCSLHIMGDGSKARTVVCNDPDMTLPPASIPPDTSRLRLERTAIRRVPGEAFRPL 82
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
G L++++L + + E++ + L L E+ L N++A +L++L L
Sbjct: 83 G--RLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLAAFPWAALRDAPKLRLLDLQA 140
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N ++ + A L L ++L Q+ + ++ ++ HL +F
Sbjct: 141 NRLSAVPAEAARFLENLTFLDLSSNQLMRLPQELIVSWA-------------HLETGIFP 187
Query: 199 PTPN-LKTLSLDGNPWCCDCHLRSFRN----WLLKSKLYSHPLSCTEPGMLQTKHWDDVK 253
P + + L L NPW CDC L + W L C P L + ++
Sbjct: 188 PGHHPRRVLGLQDNPWACDCRLYDLVHLLDGWAPNLAFIETELRCASPRSLAGVAFSQLE 247
Query: 254 AQEFACP---PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL-LNGQVLHNSSFDLL 309
++ P P V S++ GG + C G P P + W NG+ L+ + +
Sbjct: 248 LRKCQGPELHPGVASIRSLL----GGTALLRCGATGVPGPEMSWRRANGRPLNGT---VH 300
Query: 310 EEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPE 358
+E D + + V+ LD+G+Y C A+N G + ISL + E
Sbjct: 301 QEVSSDGTSWTLLGLPA--VSHLDSGDYICQAKNFLGASETVISLIVTE 347
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 211 (79.3 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 82/324 (25%), Positives = 143/324 (44%)
Query: 45 NFTALPSTLDSDIQVL---DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
N TA+P+ S ++ L L + I+ + AFK L +L+ + + + ++
Sbjct: 188 NLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKR--LFHLKHLEIDYWPLLDMMPANS 245
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
Y L + +++ ++ + F L L L+ NPI+ + AG F L L+ + +
Sbjct: 246 LYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIV 305
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRS 221
Q+ ++ + L L LN++ N L+ L E+VF L+ LS++ NP CDC L
Sbjct: 306 GAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACDCRLL- 364
Query: 222 FRNWLLKSK--LY---SHPLSCTEPGMLQTKHWDDVKAQE----FACP-PNVTIKESM-V 270
W+L+ + L P+ C P ++ + + D + F C P + K+ +
Sbjct: 365 ---WILQRQPTLQFGGQQPM-CAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL 420
Query: 271 IREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVT 330
+ + G V + C GDP+P I W V F + + G A ++ +
Sbjct: 421 LVDEGQTVQLECSADGDPQPVISW-----VTPRRRF-ITTKSNGRATVLGDGTLEIRFAQ 474
Query: 331 DLDAGEYTCYAENIRGNASGEISL 354
D D+G Y C A N GN + SL
Sbjct: 475 DQDSGMYVCIASNAAGNDTFTASL 498
Score = 147 (56.8 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 44/153 (28%), Positives = 79/153 (51%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ +DL++N I+ + AF + L NL+ + LK + ++ V F L+ L ++D+S+N+
Sbjct: 83 LEEIDLSDNIIANVEPGAFNN--LFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENK 140
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + +V +AL HL
Sbjct: 141 IVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHL 200
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+L SL+L + ++ F +LK L +D
Sbjct: 201 RSLISLHLKHLNINNMPVYAFKRLFHLKHLEID 233
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/194 (26%), Positives = 85/194 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + KS C A+P + + ++LDL+ N++ + E F S LL
Sbjct: 28 CPARCEC--SAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLL-- 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ I L ++ I V F L L + L N++ + F G L L ++ N I
Sbjct: 84 EEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVI 143
Query: 144 LRAGQFPKLPYLKTIEL-QHCQIHSVHK--DALIHLT--ALESLNLNGNRLKHLSESVFF 198
L F L LK++E+ + ++ H+ L+ L LE NL + LS
Sbjct: 144 LLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSL 203
Query: 199 PTPNLKTLSLDGNP 212
+ +LK L+++ P
Sbjct: 204 ISLHLKHLNINNMP 217
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 75/228 (32%), Positives = 99/228 (43%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI+ + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 289 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 348
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ESVF NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 349 TLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 406
Query: 249 WDD----VKAQEFACPPNVTIKE---SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVL 301
+ D + F C I++ V + G V C GDP P ILWL + L
Sbjct: 407 FKDFPDVLLPNYFTCR-RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHL 465
Query: 302 HNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 466 VSAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 507
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + ++ LC F A+P + ++ ++LDL N+I L +
Sbjct: 31 LGSVLSGSATGCPPRCEC--SAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ 88
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F S +L+ + L + + V F L L + L N++ + F G L
Sbjct: 89 DEFASFP--HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 198
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/214 (24%), Positives = 95/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N +S + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 97 LEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 214
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
L L L + + + F LK L + P+ L S +H
Sbjct: 215 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-C 273
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T L +H ++ + P TI+ SM+
Sbjct: 274 NLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSML 307
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 211 (79.3 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 81/331 (24%), Positives = 149/331 (45%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 133 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 190
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN ++ +R G F L +L+ +
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIPNLTPL--IKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P +L+ + L NPW C+C
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 308
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W ++ S+ C P L+ ++ ++ F C V ++ +
Sbjct: 309 IL-WLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTE 367
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C ++ W+ NG V+ + ++ + L + +++ T NVT D
Sbjct: 368 GMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIA----VLSDGTLNFT--NVTVQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATT 364
G YTC N GN + +L+ + ATT
Sbjct: 421 TGMYTCMVSNSVGNTTASATLN---VTAATT 448
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 102
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 163 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLIK 220
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 221 LDELDLSGN 229
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 211 (79.3 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 81/331 (24%), Positives = 149/331 (45%)
Query: 43 DANFTALPS---TLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN-SGIREVHR 98
D T +P+ S ++ L L NN I + AF I +L+R+ L + +
Sbjct: 133 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIP--SLRRLDLGELKRLSYISE 190
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
F+ L+ L ++L+ + + T L +L L L+GN ++ +R G F L +L+ +
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIPNLTPL--IKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH 218
+ QI + ++A +L +L +NL N L L +F P +L+ + L NPW C+C
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 308
Query: 219 LRSFRNWLLKSKLYSHPLSCTE---PGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAG 275
+ + +W ++ S+ C P L+ ++ ++ F C V ++ +
Sbjct: 309 IL-WLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTE 367
Query: 276 GNVT-MSCYVYGDPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLD 333
G + C ++ W+ NG V+ + ++ + L + +++ T NVT D
Sbjct: 368 GMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIA----VLSDGTLNFT--NVTVQD 420
Query: 334 AGEYTCYAENIRGNASGEISLDLPEINLATT 364
G YTC N GN + +L+ + ATT
Sbjct: 421 TGMYTCMVSNSVGNTTASATLN---VTAATT 448
Score = 178 (67.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C K +C N +P + ++ ++L+L+ N+I + +FK L +L
Sbjct: 47 CPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 102
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + IR + F L L ++L DN++ + F+ +LK L+L NPI
Sbjct: 103 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 162
Query: 144 LRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ + F ++P L+ ++L + + + + A L+ L LNL L+ + P
Sbjct: 163 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLT--PLIK 220
Query: 203 LKTLSLDGN 211
L L L GN
Sbjct: 221 LDELDLSGN 229
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 212 (79.7 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 51/155 (32%), Positives = 83/155 (53%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+++LDL+ N I+ +T+ F+ G NL + L + + + TF++LT L ++L+DN
Sbjct: 108 LRILDLSKNNITNITENNFR--GQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNS 165
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L Q F RLK L L+GNP+ +L+ F +P LK ++ ++CQ+ ++ L
Sbjct: 166 IVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLL 225
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+L N K L + F L + LDGN
Sbjct: 226 PLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGN 260
Score = 185 (70.2 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 24 CPDTCRCKWT-LGKKSALCKDANFTAL--PSTLDSDIQVLDLNNNKISYLTKEAFKSIGL 80
CP C+C L + A+C +L P+ LD D++V+ + + S A +
Sbjct: 24 CPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVIIIRGPRNSITIGPALRQFMK 83
Query: 81 LNLQRIYLKNSGIREVHRDTF---KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
L + RI +S + + ++F KYL IL DLS N I + ++ F G D L L L+
Sbjct: 84 LEILRI--TDSNLPAIGAESFWGLKYLRIL---DLSKNNITNITENNFRGQDNLLELDLS 138
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
N + + + F L L+ + L I + + L+ L+ L+L+GN L+ L VF
Sbjct: 139 KNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVF 198
Query: 198 FPTPNLKTLSLDGNPWCCDCHLR 220
P LK L C +C L+
Sbjct: 199 RDVPELKVLK------CRNCQLK 215
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/157 (26%), Positives = 80/157 (50%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S ++ LDL+ N + L + F+ + L + + +N +++++ + L +L E+DL
Sbjct: 178 SRLKYLDLSGNPLQDLQPDVFRDVPELKVLKC--RNCQLKKINPQMYNLLPLLSELDLGR 235
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N+ +L +D F RL + L+GN ++ + F L ++L + ++ V D+ +
Sbjct: 236 NEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFL 295
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
LT L L+L+ N+L L NL TL++ GN
Sbjct: 296 QLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGN 332
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDL+ NK+ + F+ L +L+R+ L ++ I E+ + F L+ L +DLS N +
Sbjct: 135 LDLSKNKVLRMASSTFRH--LTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQD 192
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L D F LKVL + ++ + LP L ++L + + KD + L
Sbjct: 193 LQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRL 252
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L+GN+L + + +F +L L L N
Sbjct: 253 TKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYN 284
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 85/317 (26%), Positives = 140/317 (44%)
Query: 42 KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
KD NF L L S + + +N ++ + +A GL NL+ I ++ + +V +
Sbjct: 204 KDMNFQPLVK-LRS-LVIAGIN---LTEIPDDALA--GLENLESISFYDNRLSKVPQVAL 256
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP-ITELRAGQFPKLPYLKTIEL 160
+ L +DL+ N I + + F LK L +N P + + + LP L+ IE
Sbjct: 257 QKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEA 316
Query: 161 -QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHL 219
+ ++ +H +A L LESL LN N L L PNLK +S+ NP CDC +
Sbjct: 317 TNNPRLSYIHPNAFFRLPKLESLMLNTNALSALYHGTIESLPNLKEISIHSNPIRCDCVI 376
Query: 220 RSFRNWLLKSKL---YSHP--LSCTEPGMLQTKHWDDVKAQEFA--CPPNVTIKE--SMV 270
R W+ +K + P L C +P Q ++ V ++ C P + + S +
Sbjct: 377 R----WINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSDL 432
Query: 271 IREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV-SITLFNV 329
EA V++ C +P+P I W+ S LL + + S ++ + +
Sbjct: 433 DVEADSYVSLHCRATAEPQPEIYWITP------SGKKLLPNTMREKFYVHSEGTLEIRGI 486
Query: 330 TDLDAGEYTCYAENIRG 346
T + G YTC A N+ G
Sbjct: 487 TPKEGGLYTCIATNLVG 503
Score = 158 (60.7 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 42/151 (27%), Positives = 74/151 (49%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLH 121
L NK++ L ++ GL NLQ +Y+ ++ + + F L L+ + L+ N++ ++
Sbjct: 123 LEENKLTELPEKCL--YGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMIN 180
Query: 122 QDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALES 181
F L++L L NPI ++ F L L+++ + + + DAL L LES
Sbjct: 181 SQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDALAGLENLES 240
Query: 182 LNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
++ NRL + + NLK L L+ NP
Sbjct: 241 ISFYDNRLSKVPQVALQKAVNLKFLDLNKNP 271
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/197 (23%), Positives = 82/197 (41%)
Query: 23 DCPDTCRCK---WTLGKKSAL------CKDANFTALPSTLDSDIQVLDLNNNKISYLTKE 73
DCP C C+ W + + C D P+ L +D Q+L L N I+ +
Sbjct: 28 DCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHS 87
Query: 74 AFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKV 133
+ L L L + + V + ++ L+ V L +N++ L + G L+
Sbjct: 88 TDFPVNLTGLD---LSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQE 144
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LY+N N ++ + G F L L + L ++ ++ L LE L L N + +
Sbjct: 145 LYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIK 204
Query: 194 ESVFFPTPNLKTLSLDG 210
+ F P L++L + G
Sbjct: 205 DMNFQPLVKLRSLVIAG 221
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 44/158 (27%), Positives = 78/158 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S++Q L +N+N +S ++ AF IGL NL R++L ++ ++ ++ F L L + L D
Sbjct: 140 SNLQELYVNHNLLSTISPGAF--IGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGD 197
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N I + F +L+ L + G +TE+ L L++I ++ V + AL
Sbjct: 198 NPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDALAGLENLESISFYDNRLSKVPQVALQ 257
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L+ L+LN N + + F +LK L ++ P
Sbjct: 258 KAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMP 295
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L+ + I + T + L +DLS N ++ + +L +YL N +TE
Sbjct: 72 QILLLQTNNIARIEHST-DFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTE 130
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L L L+ + + H + ++ A I L L L+LN NRL+ ++ F PNL
Sbjct: 131 LPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNL 190
Query: 204 KTLSLDGNP 212
+ L L NP
Sbjct: 191 EILMLGDNP 199
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 211 (79.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 62/191 (32%), Positives = 91/191 (47%)
Query: 57 IQVLDLNNN-KISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL++N ++ + F+ +G L ++L G+RE+ F+ L L + L DN
Sbjct: 107 LEQLDLSDNAQLRAVDPATFRGLG--RLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDN 164
Query: 116 QIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ L D F LGN L L+L+GN I + F L L + L ++ VH A
Sbjct: 165 GLQALPDDAFSDLGN--LTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAF 222
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L L +L L N L LS P +L+ L L+ NPW CDC R WL + + S
Sbjct: 223 RDLGRLMTLYLFANNLSALSAEALAPLRSLQYLRLNDNPWVCDCRARPLWAWLQQFRGSS 282
Query: 234 HPLSCTEPGML 244
L C+ P L
Sbjct: 283 SELPCSLPARL 293
Score = 193 (73.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 62/217 (28%), Positives = 106/217 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C ++ K + C A+P+ + + Q + L+ N+I+Y+ +F++ NL
Sbjct: 27 CPGACVC-YSEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRIAYVPAASFRACR--NL 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
++L ++ + + F L +L ++DLSDN Q+ + TF G RL L+L+ +
Sbjct: 84 TILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLR 143
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + LQ + ++ DA L L L L+GN + + E F +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHS 203
Query: 203 LKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLS 237
L L L N H +FR+ L+ L+++ LS
Sbjct: 204 LDRLLLHQNR-VARVHPHAFRDLGRLMTLYLFANNLS 239
Score = 39 (18.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 489 HLPTSTYGNIFISVS---VSQEPPGSDPPKYPD 518
H+ S +G + S + +P GS PP P+
Sbjct: 378 HINDSPFGTLPGSAEPPLTAVQPEGSQPPGSPN 410
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 67/220 (30%), Positives = 108/220 (49%)
Query: 49 LPSTL---DSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLT 105
LPS L ++ L L+ N + L K F IG L+ + LK++ +R + F+ LT
Sbjct: 257 LPSALFLHSHNLTFLTLSENPLEELPKVLFGEIG--GLRELRLKSTQLRTLPAAAFRNLT 314
Query: 106 IL--VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L +EV LS +++ L +D F G L+VL L+ + L AG L L+ + L+
Sbjct: 315 GLRVLEVSLSP-RLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSN 373
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFR 223
++ ++ +L++LE + L+ N+L+ L F P L + L NPW CDC L F
Sbjct: 374 RLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHNPWRCDCGLGPFL 433
Query: 224 NWLLK-SKLY--SHPLSCTEPGMLQTKHWDDVKAQEFACP 260
WL + + L + P C PG + ++A + CP
Sbjct: 434 AWLRRHAGLVGRAEPPRCHGPGPHAGRLLWTLQAGDLGCP 473
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/169 (29%), Positives = 86/169 (50%)
Query: 47 TALPSTLDSDIQVLD---LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LPS L ++ +L+ L+ N++ L + F+ L++LQ ++L + + + F +
Sbjct: 111 THLPSALLDNLVLLEQLFLDGNELKSLDQNLFQK--LVHLQELFLNQNQLAFLPASLFTH 168
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L L +DLS N + L + F +L+ L L+ N + L +G L L ++L
Sbjct: 169 LGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTN 228
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+ S+ A L +L SL L+ NRL+ L ++F + NL L+L NP
Sbjct: 229 HLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENP 277
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 54/177 (30%), Positives = 95/177 (53%)
Query: 40 LCKDANFTAL-PSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREV 96
L D++ +A+ P T + I++ L L+ NKI++L ++ LL ++++L + ++ +
Sbjct: 80 LLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLL--EQLFLDGNELKSL 137
Query: 97 HRDTFKYLTILVEVDLSDNQIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQFPKLPY 154
++ F+ L L E+ L+ NQ+A+L F LGN LK+L L+GN +T L G F
Sbjct: 138 DQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGN--LKLLDLSGNNLTHLPEGLFGVQVK 195
Query: 155 LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ + L ++ S+ L L AL L L+ N L+ + F +L +L+L N
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSEN 252
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 61/222 (27%), Positives = 99/222 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPST-LDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP TCRC + + +A C + + L +++ + L L +F + +L
Sbjct: 21 CPPTCRCAF---RDAAQCSRGTVAGIAALGLPTNLTHILLFQMGRGTLQNNSFSDMTVL- 76
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGN-DRLKVLYLNGNPI 141
QR+ L +S + + TF L + LS N+I L L N L+ L+L+GN +
Sbjct: 77 -QRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHL-PSALLDNLVLLEQLFLDGNEL 134
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
L F KL +L+ + L Q+ + HL L+ L+L+GN L HL E +F
Sbjct: 135 KSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQV 194
Query: 202 NLKTLSLDGNPWCC-DCHLRSFRNWLLKSKLYSHPLSCTEPG 242
L+ L L N + L L + +L+++ L PG
Sbjct: 195 KLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG 236
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 71 TKEAFKSIGL-LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGND 129
T ++GL NL I L G + ++F +T+L + LSD+ ++ + TF
Sbjct: 39 TVAGIAALGLPTNLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPI 98
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
+LK L L+ N IT L + L L+ + L ++ S+ ++ L L+ L LN N+L
Sbjct: 99 KLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQL 158
Query: 190 KHLSESVFFPTPNLKTLSLDGNPWC-CDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQT 246
L S+F NLK L L GN L + L K L+S+ L+ E G+L +
Sbjct: 159 AFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDS 216
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 47/168 (27%), Positives = 79/168 (47%)
Query: 45 NFTALPSTL---DSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
N T LP L +Q L L++N+++ L S+ L + L + +R + F
Sbjct: 181 NLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALT--ELQLHTNHLRSIVPGAF 238
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L L + LS+N++ +L FL + L L L+ NP+ EL F ++ L+ + L+
Sbjct: 239 DRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLK 298
Query: 162 HCQIHSVHKDALIHLTALESLNLN-GNRLKHLSESVFFPTPNLKTLSL 208
Q+ ++ A +LT L L ++ RL L E F L+ L+L
Sbjct: 299 STQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLAL 346
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 214 (80.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 49/159 (30%), Positives = 82/159 (51%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK LT L +++LS+N+++ + F G + L+L N + +R+G F L L+T+ L
Sbjct: 424 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 483
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
++ +I +H D+ L + L+L N++ +S F L TL+L NP+ C+C L
Sbjct: 484 RNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLA 543
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
+WL K K+ + C P L+ DV +F C
Sbjct: 544 WLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRC 582
Score = 208 (78.3 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 56/177 (31%), Positives = 89/177 (50%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
+ I L+ +GI+ + F L +DLS+NQI+ + D F G L L L GN IT
Sbjct: 175 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIT 234
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L G F L L+ + L +I+ V DA L L L+L N+++ L++ F
Sbjct: 235 DLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRA 294
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
++TL L NP+ CDC+L ++L + + + C P L K +K+++F C
Sbjct: 295 IQTLHLAQNPFICDCNLW-LADFLRTNPIETSGARCASPRRLANKRIGQIKSKKFRC 350
Score = 176 (67.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP CRC+ ++ + C + +P + L LNNN+IS L FK L +
Sbjct: 376 CPHKCRCEASVVE----CSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKK--LTH 429
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ + E+ F+ + E+ L+ NQ+ + F G D L+ L L N I+
Sbjct: 430 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 489
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L AL +LNL N + +
Sbjct: 490 CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWL 549
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 550 RKRKIVTGNPRC 561
Score = 157 (60.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+++ L+ N I+ L F + L T+ L + + + A L +L L+L+GN +
Sbjct: 649 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 708
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKH 248
L E +F +L L++ NP CDCHLR W+ Y P C P ++ K
Sbjct: 709 TLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSGWVKTG--YKEPGIARCAGPPDMEGKL 766
Query: 249 WDDVKAQEFAC--PPNVTIK 266
A++F C PP + ++
Sbjct: 767 LLTTPAKKFECQGPPTLAVQ 786
Score = 148 (57.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 49/164 (29%), Positives = 73/164 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C+ TA+P+ L + + L N I + AF L
Sbjct: 146 CPAMCACSNGIVD----CRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--KL 199
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+RI L N+ I E+ D F+ L L + L N+I L + F G L++L LN N I
Sbjct: 200 RRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINC 259
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+R F L L + L +I + K L A+++L+L N
Sbjct: 260 VRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQN 303
Score = 147 (56.8 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/124 (30%), Positives = 54/124 (43%)
Query: 136 LNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
L+ N I + F LK ++L QI + + A L LE L LN N + + S
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQ 255
F P L+T L N CDCHL WL + C+ P L+ + +V+
Sbjct: 64 SFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKS 123
Query: 256 EFAC 259
EF+C
Sbjct: 124 EFSC 127
Score = 125 (49.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 39/117 (33%), Positives = 56/117 (47%)
Query: 134 LYLNGNPITELRA-GQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L LN N I+ L A G F KL +LK I L + ++ + A ++ L+L N+L+ +
Sbjct: 408 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 467
Query: 193 SESVFFPTPNLKTLSLDGNPWCCDCHLRSF---RNWLLKSKLYSHPLSCTEPGMLQT 246
+F L+TL L N C H SF RN L S LY + ++ PG T
Sbjct: 468 RSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLS-LYDNQIATISPGAFDT 522
Score = 93 (37.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
LYL+GN L GQ YL+ ++L + +I S+ + +++ L +L L+ N L+ +
Sbjct: 629 LYLDGNQFM-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 687
Query: 194 ESVFFPTPNLKTLSLDGN 211
F +L+ LSL GN
Sbjct: 688 PLAFQGLRSLRLLSLHGN 705
Score = 88 (36.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 37/103 (35%), Positives = 50/103 (48%)
Query: 38 SALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVH 97
S + DA F L S L+S L L NKI+ L + F GL LQ + L + I V
Sbjct: 210 SEIAPDA-FQGLRS-LNS----LVLYGNKITDLPRGVFG--GLFTLQLLLLNANKINCVR 261
Query: 98 RDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
D F+ L L + L DN+I L + TF ++ L+L NP
Sbjct: 262 PDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQNP 304
Score = 71 (30.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 61 DLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWL 120
DL+ N I + ++AF+ G +L+ + L + I + F+ L L + L++N I+ +
Sbjct: 3 DLSENTIQAIPRKAFR--GATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTI 60
Query: 121 HQDTFLGNDRLKVLYLNGN 139
+F +L+ L+ N
Sbjct: 61 PVSSFNHMPKLRTFRLHSN 79
Score = 66 (28.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+D++ L L+ N+IS + + AF++ L L+ + L N+ I + +F ++ L L
Sbjct: 21 TDLKNLQLDKNQISCIEEGAFRA--LRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHS 78
Query: 115 NQI------AWLHQ 122
N + AWL Q
Sbjct: 79 NHLFCDCHLAWLSQ 92
>MGI|MGI:2385129 [details] [associations]
symbol:Lrrc26 "leucine rich repeat containing 26"
species:10090 "Mus musculus" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0008076 "voltage-gated potassium
channel complex" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015459 "potassium channel regulator activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2385129 GO:GO:0005737 GO:GO:0005856
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0008076 GO:GO:0015459 GO:GO:0005216
InterPro:IPR000372 SMART:SM00013 EMBL:AL732309 HSSP:P07359
CTD:389816 HOGENOM:HOG000113367 HOVERGEN:HBG096585 OMA:DAAFSHC
OrthoDB:EOG4V438G EMBL:AK137758 EMBL:AK142669 EMBL:BC024531
EMBL:BC024539 EMBL:BC004853 IPI:IPI00127194 RefSeq:NP_666229.1
UniGene:Mm.275228 ProteinModelPortal:Q91W20 SMR:Q91W20
PhosphoSite:Q91W20 PRIDE:Q91W20 Ensembl:ENSMUST00000028337
GeneID:227618 KEGG:mmu:227618 UCSC:uc008irg.2
GeneTree:ENSGT00700000104083 InParanoid:Q91W20 NextBio:378666
Bgee:Q91W20 CleanEx:MM_LRRC26 Genevestigator:Q91W20 Uniprot:Q91W20
Length = 331
Score = 201 (75.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 61/178 (34%), Positives = 90/178 (50%)
Query: 13 LGT--TGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYL 70
+GT + SP +CP+ C C +LG K A C A+P+ L ++ L L++N++S L
Sbjct: 30 IGTAPSKSPVAPECPEACSC--SLGGK-ANCSALALPAVPADLSWQVRSLLLDHNRVSAL 86
Query: 71 TKEAFKSIG-LLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGND 129
AF + G LL L L+ + +R VH F L +L +DLS NQ+ L TF
Sbjct: 87 PPGAFANAGALLYLD---LRENRLRSVHARAFWGLGVLQWLDLSSNQLETLPPGTFAPLR 143
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
L L L GN + L LP L+ + LQ + ++ L +L AL+ L L+GN
Sbjct: 144 ALSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNSLSAIEAGLLNNLPALDVLRLHGN 201
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 45/158 (28%), Positives = 70/158 (44%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
++ + L ++ + + F L+ +DL +N++ +H F G L+ L L+ N +
Sbjct: 73 VRSLLLDHNRVSALPPGAFANAGALLYLDLRENRLRSVHARAFWGLGVLQWLDLSSNQLE 132
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
L G F L L + L ++ + L L L L+L N L + + P
Sbjct: 133 TLPPGTFAPLRALSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNSLSAIEAGLLNNLPA 192
Query: 203 LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTE 240
L L L GNPW C+C LR WL K + P S TE
Sbjct: 193 LDVLRLHGNPWTCNCALRPLCTWLRK---HPRPASETE 227
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 210 (79.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 67/204 (32%), Positives = 97/204 (47%)
Query: 44 ANFTALPSTLDSDIQVLDLNNN-KISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
A FT L TL ++ LDL++N ++ + F+ +G +L ++L G++E+ F+
Sbjct: 99 AAFTGL--TL---LEQLDLSDNAQLRVVDPTTFRGLG--HLHTLHLDRCGLQELGPGLFR 151
Query: 103 YLTILVEVDLSDNQIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
L L + L DN + L +TF LGN L L+L+GN I + F L L + L
Sbjct: 152 GLAALQYLYLQDNNLQALPDNTFRDLGN--LTHLFLHGNRIPSVPEHAFRGLHSLDRLLL 209
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ VH A L L +L L N L L V P +L+ L L+ NPW CDC R
Sbjct: 210 HQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWVCDCRAR 269
Query: 221 SFRNWLLKSKLYSHPLSCTEPGML 244
WL K + S + C P L
Sbjct: 270 PLWAWLQKFRGSSSEVPCNLPQRL 293
Score = 198 (74.8 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 64/219 (29%), Positives = 106/219 (48%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP C C + K + C A+P+ + + Q + L+ N+ISY+ +F+S
Sbjct: 25 TPCPGACVC-YNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISYVPAASFQSCR-- 81
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNP 140
NL ++L ++ + + F LT+L ++DLSDN Q+ + TF G L L+L+
Sbjct: 82 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 141
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
+ EL G F L L+ + LQ + ++ + L L L L+GNR+ + E F
Sbjct: 142 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 201
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLS 237
+L L L N H +FR+ L+ L+++ LS
Sbjct: 202 HSLDRLLLHQNH-VARVHPHAFRDLGRLMTLYLFANNLS 239
Score = 38 (18.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 489 HLPTSTYGNIFISVS---VSQEPPGSDPPKYP 517
H+ S +G + S + P GS+PP P
Sbjct: 378 HINDSPFGTLPGSAEPPLTALRPGGSEPPGLP 409
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 210 (79.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 56/188 (29%), Positives = 97/188 (51%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
C C C G + C TA+P L + Q L L N +S++ +A GL L
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALS--GLKEL 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L+N+ ++ V + + L+ L + L N I + +D+F G +L+ L+L+ N +TE
Sbjct: 84 KVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE 143
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ LP L+ + L +I S+ A +L++L L+L+ N+++ LS+ F NL
Sbjct: 144 VPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNL 203
Query: 204 KTLSLDGN 211
+TL L+ N
Sbjct: 204 ETLDLNYN 211
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++VL L NN++ + EA + GL LQ + L + I V D+F+ L L + L DN
Sbjct: 82 ELKVLTLQNNQLKTVPSEAIR--GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDN 139
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ + L+ L L N I+ + F L L + L + +I S+ +
Sbjct: 140 SLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDG 199
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKS-KLYSH 234
L LE+L+LN N L +++ P+LK L N N LL++ LY +
Sbjct: 200 LDNLETLDLNYNNLGEFPQAIK-ALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDN 258
Query: 235 PLS 237
PLS
Sbjct: 259 PLS 261
Score = 134 (52.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 48/173 (27%), Positives = 80/173 (46%)
Query: 39 ALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHR 98
AL K ++ T S + VL L+NNKI L++ F GL NL+ + L + + E +
Sbjct: 161 ALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFD--GLDNLETLDLNYNNLGEFPQ 218
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTI 158
K L L E+ N I+ + F GN L+ ++L NP++ + F L L ++
Sbjct: 219 -AIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSL 277
Query: 159 ELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++ + + L LESL L G ++ + ++ L+TL L N
Sbjct: 278 VIRGASMVQQFPN-LTGTVHLESLTLTGTKISSIPNNLCQEQKMLRTLDLSYN 329
>UNIPROTKB|Q1RMS4 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9913 "Bos taurus" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 GO:GO:0030425 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352
GeneTree:ENSGT00660000095307 EMBL:BC114740 IPI:IPI00689182
RefSeq:NP_001070427.1 UniGene:Bt.55363 ProteinModelPortal:Q1RMS4
Ensembl:ENSBTAT00000000176 GeneID:767839 KEGG:bta:767839 CTD:79414
eggNOG:NOG323197 InParanoid:Q1RMS4 KO:K16356 OMA:WAVGEEE
OrthoDB:EOG4H465G NextBio:20918207 Uniprot:Q1RMS4
Length = 628
Score = 203 (76.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 88/324 (27%), Positives = 137/324 (42%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I ++ AF L L+ ++L + + + + L L + LS+NQ+A
Sbjct: 88 LSLSRNTIRHVAAGAFSD--LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAA 145
Query: 120 LHQDTFLG-NDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
L + L+ L L+ N + +L +L + T+ L H + SV A L
Sbjct: 146 LAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHK 205
Query: 179 LESLNLNGNRLKHLS-ESVFFPTPNLK----------TLSLDGNPWCCDCHLRSFRNWLL 227
L L++ NRL + + +F P L L+ GNP C+C L WL
Sbjct: 206 LARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLAFGGNPLHCNCELV----WLR 261
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYVYG 286
+ +C P L +++ V +EF C PP VT + + AG + C G
Sbjct: 262 RLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVG 321
Query: 287 DPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIR 345
DPEP + W+ G++L NSS A F ++ L D G +TC A N
Sbjct: 322 DPEPRVRWVSPQGRLLGNSS-------RARA-FPNG-TLELLVTEPGDGGIFTCIAANAA 372
Query: 346 GNASGEISLDL---PEINLATTLS 366
G A+ + L + P LA + S
Sbjct: 373 GEATAAVELTVGPPPPPQLANSTS 396
Score = 142 (55.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 51/190 (26%), Positives = 81/190 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP CRC+ S LC A +P +LD L L +N I+ + + ++ GLL+
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIATVRRRDLANMTGLLH 87
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + IR V F L L + L N++ L + G L+ L L+ N +
Sbjct: 88 LS---LSRNTIRHVAAGAFSDLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLA 144
Query: 143 ELRAGQFPKLPY-LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
L AG L+ ++L + + + +AL L + +L L+ N L + F
Sbjct: 145 ALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLH 204
Query: 202 NLKTLSLDGN 211
L L + N
Sbjct: 205 KLARLDMTSN 214
Score = 50 (22.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 17/63 (26%), Positives = 24/63 (38%)
Query: 507 EPPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAYFATLPRRPRSKVIEPSSLVRVGPKYDN 566
+PPG P + + GP PA A P PR+ + GP ++
Sbjct: 570 QPPGKTKASAP--VSSVCSQTNGALGP--MPAPPAPEPSAPRAHTVVQLDCEPWGPSHEP 625
Query: 567 MGP 569
MGP
Sbjct: 626 MGP 628
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 207 (77.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 94/342 (27%), Positives = 142/342 (41%)
Query: 44 ANFTALPSTLDSDIQVLD---LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDT 100
+N T++P+ S +Q L L IS L AF+ + L +I L S + ++ ++
Sbjct: 188 SNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQI-LHWSSLEMLNSNS 246
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
L + V L++ ++ + L+ L L+ NPIT ++ L L+ + L
Sbjct: 247 LVGLNLTTLV-LTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHL 305
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ + A L+ LN++ NRL L ES F NL+TL LD NP CDC L
Sbjct: 306 VGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLACDCRLL 365
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQE----FACPP----NVTIKESMVIR 272
+ +C+ P Q K + D E F C N +++ VI
Sbjct: 366 WVMRRRRRLDFDGRQPTCS-PLNHQRKAFRDFSEAELPVVFTCRQAQILNRQLQDISVIE 424
Query: 273 EAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL 332
G V C G P P+I WL + Q SS + L S+ I+ V D
Sbjct: 425 --GMRVHFDCKADGYPSPSITWL-SAQQSALSSAGRVR-----VLTNGSLQISYAQVQD- 475
Query: 333 DAGEYTCYAENIRGNASGEISLD---LPEINLATTLSKTDSW 371
+G Y C A N GN S +SL LP+ N + + W
Sbjct: 476 -SGTYLCSAANAAGNDSISVSLHVEGLPQ-NRTVSYFSDEGW 515
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S ++ LDL+ N IS + E F+ GL NL+ + +KN+ ++ + F L+ L +D+S+
Sbjct: 82 SKLEDLDLSENIISMIEVETFQ--GLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISE 139
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N+I TF L+ L N + + F L LK + + + S+ +AL
Sbjct: 140 NEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALS 199
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSL 208
L +L L L + L + F L+TL +
Sbjct: 200 QLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQI 233
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/185 (23%), Positives = 82/185 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C + TA+P L ++ + LDL+ N++ L + F S+ L
Sbjct: 29 CPQRCSC--SRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFSSLS--KL 84
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ + L + I + +TF+ L L + + +N++ L F G L+ L ++ N I
Sbjct: 85 EDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILV 144
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
F + L+ ++ + + + A + L AL+ LN++ + L + +L
Sbjct: 145 FLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSL 204
Query: 204 KTLSL 208
L L
Sbjct: 205 TKLRL 209
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N +R+ L + ++ + R F L+ L ++DLS+N I+ + +TF G L+ L + N +
Sbjct: 59 NAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRL 118
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH-LTALESLNLNGNRLKHLSESVFFPT 200
L G F L L+ +++ +I V D + L+ L+ N L +S+ F
Sbjct: 119 KILPVGVFSGLSNLRRLDISENEI-LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGL 177
Query: 201 PNLKTLSLD 209
LK L++D
Sbjct: 178 QALKELNVD 186
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 207 (77.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 74/228 (32%), Positives = 98/228 (42%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI+ + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 283 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 342
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 343 TLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 400
Query: 249 WDD----VKAQEFACPPNVTIKE---SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVL 301
+ D + F C I++ V + G V C GDP P ILWL + L
Sbjct: 401 FKDFPDVLLPNYFTCR-RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHL 459
Query: 302 HNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 460 VSAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 501
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + ++ LC F A+P + ++ ++LDL N+I L +
Sbjct: 25 LGSVLSGSATGCPPRCEC--SAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ 82
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F S +L+ + L + + V F L L + L N++ + F G L
Sbjct: 83 DEFASFP--HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 140
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 141 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 192
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 53/214 (24%), Positives = 95/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N +S + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 91 LEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 148
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 149 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 208
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
L L L + + + F LK L + P+ L S +H
Sbjct: 209 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-C 267
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T L +H ++ + P TI+ SM+
Sbjct: 268 NLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSML 301
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 207 (77.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 74/228 (32%), Positives = 98/228 (42%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI+ + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 289 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 348
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 349 TLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 406
Query: 249 WDD----VKAQEFACPPNVTIKE---SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVL 301
+ D + F C I++ V + G V C GDP P ILWL + L
Sbjct: 407 FKDFPDVLLPNYFTCR-RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHL 465
Query: 302 HNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 466 VSAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 507
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + ++ LC F A+P + ++ ++LDL N+I L +
Sbjct: 31 LGSVLSGSATGCPPRCEC--SAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ 88
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F S +L+ + L + + V F L L + L N++ + F G L
Sbjct: 89 DEFASFP--HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 198
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 53/214 (24%), Positives = 95/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N +S + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 97 LEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 214
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
L L L + + + F LK L + P+ L S +H
Sbjct: 215 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-C 273
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T L +H ++ + P TI+ SM+
Sbjct: 274 NLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSML 307
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 209 (78.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C + C C+ G + C++ +L + L L+ N +S L F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEF--VNYT 105
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++L ++ I+++ F L L + L++N++ L DTFLG + L+ L ++ N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE-SVFFPT 200
+ + F KL L+ + L + S+ + L L L+L GNRLK L +
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHM 224
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS---CTEPGMLQTKHWDDVKAQEF 257
+ L L+ NPW C C L S ++WL S YS + C P L + D+V QE
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWL-DSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
Query: 258 ACP 260
CP
Sbjct: 284 -CP 285
Score = 183 (69.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKK--SALCKDANFTALPSTLDSDI--QVLDLNNNKISYLT 71
T SP +CP C C + + C++ ++ + + L N I+ +
Sbjct: 366 TKSPVPLECPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVR 425
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F L+L ++L N+ I + F LT L + L+ N+I L + F G L
Sbjct: 426 RSDFLEATGLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSL 483
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
+ L+L N I E++ G F +P L+ + L + + ++ LT L LNL N
Sbjct: 484 QYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLR-LNLRSNHFTS 542
Query: 192 LSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKH 248
L S V +L + L NPW C C + + W+ LK+ + + C P
Sbjct: 543 LPVSRVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWVEQLKAGVLVDEVICKAPKKFAETD 602
Query: 249 WDDVKAQEFACP 260
+K+ E CP
Sbjct: 603 MRSIKS-ELLCP 613
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 55/185 (29%), Positives = 99/185 (53%)
Query: 48 ALPSTLD-SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTI 106
ALPS D +++ + ++ N I+ + AF + NLQ I ++N+ I ++ R++F+ L
Sbjct: 285 ALPSLKDLPNLKQVRVDGNLITKIETLAFSNNP--NLQLISVQNNNIVQISRNSFESLDK 342
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
LV + + +N +A + + F G L+ L + N +T L A F +L +L T++L H +IH
Sbjct: 343 LVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIH 402
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
+ + L+ L L+L+ N++ SVF + + LDGN CD F +L
Sbjct: 403 DIEEGTFDKLSKLFWLDLSNNKISGFKTSVF--KKKISNILLDGNQLICDESFNEFLTYL 460
Query: 227 LKSKL 231
+ +K+
Sbjct: 461 IANKV 465
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 36/165 (21%), Positives = 81/165 (49%)
Query: 50 PSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTI 106
P +LD+ + +LD++ N + + + ++ NL + L ++ I E++ L
Sbjct: 167 PKSLDAVKASLVLLDVSGNCLDAIPAQILRNAA--NLMYLDLGSNNISEINNFELMNLPF 224
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
L E+ + +N + +H F+ +L+ LYL N I+ L + L+ +++ + ++
Sbjct: 225 LRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALY 284
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++ +L L L+ + ++GN + + F PNL+ +S+ N
Sbjct: 285 AL--PSLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNN 327
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTI-LVEVDLS 113
S + ++LN+N+IS + +AF GL L ++ L+N+ I + + + LV +D+S
Sbjct: 126 STLMSMNLNSNQISSIPDKAFN--GLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVS 183
Query: 114 DNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
N + + L L L N I+E+ + LP+L+ + +Q+ + +H A
Sbjct: 184 GNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAF 243
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+++ L+ L L N + L + NL+ L + N
Sbjct: 244 MNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNN 281
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 209 (78.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 64/203 (31%), Positives = 99/203 (48%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIY-LK-N----SGIREVHRDTFKYLTI 106
L +QVLDL N I Y T+ N+ R+Y LK N +GI + R F+ LT
Sbjct: 526 LSGTLQVLDLQGNMIMYFTEHTHSPFK--NMSRLYDLKLNGQQPNGINLLPRAFFRGLTS 583
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGN--PITELRAGQFPKLPYLKTIELQHCQ 164
L + L++N I +TF L L L+ + + +L++G F L L+T+ L++
Sbjct: 584 LKSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSCAGVAQLQSGIFKSLQKLRTLSLENMG 643
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRN 224
I S KD +LT L++L+LN N + L S+ NL + + P C CH +N
Sbjct: 644 IKSFSKDVFGNLTGLKTLHLNRNPMMSLDISLLDNLTNLIYIDMRSCPLSCGCHNSDLQN 703
Query: 225 WLLKSKLYSHP----LSCTE-PG 242
W + +K P ++C + PG
Sbjct: 704 WTIMNKRLQFPHLFNITCPDHPG 726
Score = 153 (58.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 48/171 (28%), Positives = 84/171 (49%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFK 102
+ + TA+ S + L ++++ I Y+ ++F L NL + L + I + +D F
Sbjct: 48 ERDITAIVSDVFPTALNLTISHSNIEYVQSQSFDH--LPNLTALILDANHITNIDKDAFN 105
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQH 162
L L ++LS N I++LH+D F L L L N +T F L LK ++L+
Sbjct: 106 NLHHLQTLNLSCNNISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSLTNLKILDLRR 165
Query: 163 CQIHSVHK--DALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+++ +++ +LT+L L+L+ N+L L S P +L L L N
Sbjct: 166 NHLYNFSSVVESITNLTSLIKLDLSFNKLTTLQHSTHLPE-SLALLYLGDN 215
Score = 135 (52.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
D++ L L+NN +S + ++F+ L NL+ + L+N+ I + TF+ L+ L +DL N
Sbjct: 432 DLKTLRLDNNLLSDIYNDSFED--LTNLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGGN 489
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLP-YLKTIELQHCQI--HSVHKDA 172
+I+ L F G L LYL+ N + + F KL L+ ++LQ I + H +
Sbjct: 490 KISQLKPHAFDGLYSLTNLYLDRNHLKMIDVVLFGKLSGTLQVLDLQGNMIMYFTEHTHS 549
Query: 173 LI-HLTALESLNLNG---NRLKHLSESVFFPTPNLKTLSLDGN 211
+++ L L LNG N + L + F +LK+L L N
Sbjct: 550 PFKNMSRLYDLKLNGQQPNGINLLPRAFFRGLTSLKSLYLTNN 592
>MGI|MGI:2385612 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:2385612 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357
OMA:PHGGNGS OrthoDB:EOG4GTKCM EMBL:DQ078786 EMBL:AK081560
EMBL:AK163603 EMBL:BC023036 EMBL:BC023156 IPI:IPI00330802
RefSeq:NP_700437.2 UniGene:Mm.329675 ProteinModelPortal:Q80XU8
SMR:Q80XU8 STRING:Q80XU8 PhosphoSite:Q80XU8 PaxDb:Q80XU8
PRIDE:Q80XU8 Ensembl:ENSMUST00000053597 Ensembl:ENSMUST00000113822
GeneID:225875 KEGG:mmu:225875 UCSC:uc008gah.2 InParanoid:Q460G5
NextBio:377837 Bgee:Q80XU8 Genevestigator:Q80XU8
GermOnline:ENSMUSG00000045045 Uniprot:Q80XU8
Length = 636
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 83/309 (26%), Positives = 137/309 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I+ + +F L +L+ ++L + + E+ + + L + LS NQ+
Sbjct: 77 LTLSRNAITRIGARSFGD--LESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLGR 134
Query: 120 LHQ---DTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ D FL D L+ L ++ N + ++ +P L T+ L H I ++ L
Sbjct: 135 IAPGAFDDFL--DSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNLIDALPPGVFAQL 192
Query: 177 TALESLNLNGNRLKHLSESVFFP-------TPNLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
+ L L+L NRL L+ F +P+ LS GNP C+C L WL +
Sbjct: 193 SQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGNPLHCNCELL----WLRRL 248
Query: 230 KLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKES--MVIREAGGNVTMSCYVYGD 287
+C P L +++ V EF+C P + + + + + E G T+ C GD
Sbjct: 249 ARPDDLETCASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLE-GQRATLRCRALGD 307
Query: 288 PEPTILWL-LNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL-DAGEYTCYAENIR 345
P PT+ W+ + +++ NSS A ++ I VT DAG YTC A N
Sbjct: 308 PVPTMHWVGPDDRLVGNSS-------RAWAFPNGTLEI---GVTGAGDAGAYTCIATNPA 357
Query: 346 GNASGEISL 354
G A+ + L
Sbjct: 358 GEATARVEL 366
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 50/190 (26%), Positives = 81/190 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP C C+ S LC +P +D L L +N I L F+++ GL++
Sbjct: 17 CPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQALGPPDFRNMTGLVD 76
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + I + +F L L + L N++ L + G L+ L L+GN +
Sbjct: 77 LT---LSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLG 133
Query: 143 ELRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ G F L L+ +++ + + V + + AL +LNL+ N + L VF
Sbjct: 134 RIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNLIDALPPGVFAQLS 193
Query: 202 NLKTLSLDGN 211
L L L N
Sbjct: 194 QLSRLDLTSN 203
>RGD|1585286 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1585286 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473953
GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM IPI:IPI00195375 RefSeq:NP_001102978.1
UniGene:Rn.198548 ProteinModelPortal:D4ABX8
Ensembl:ENSRNOT00000026169 GeneID:688721 KEGG:rno:688721
UCSC:RGD:1585286 NextBio:737115 Uniprot:D4ABX8
Length = 636
Score = 206 (77.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 83/309 (26%), Positives = 137/309 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I+ + +F L +L+ ++L + + E+ + + L + LS NQ+
Sbjct: 77 LTLSRNAITRIGARSFGD--LESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLGR 134
Query: 120 LHQ---DTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ D FL D L+ L ++ N + ++ +P L T+ L H I ++ L
Sbjct: 135 IAPGAFDDFL--DSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNLIDALPPGVFAQL 192
Query: 177 TALESLNLNGNRLKHLSESVFFP-------TPNLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
+ L L+L NRL L+ F +P+ LS GNP C+C L WL +
Sbjct: 193 SQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGNPLHCNCELL----WLRRL 248
Query: 230 KLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKES--MVIREAGGNVTMSCYVYGD 287
+C P L +++ V EF+C P + + + + + E G T+ C GD
Sbjct: 249 ARPDDLETCASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLE-GQRATLRCRALGD 307
Query: 288 PEPTILWL-LNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL-DAGEYTCYAENIR 345
P PT+ W+ + +++ NSS A ++ I VT DAG YTC A N
Sbjct: 308 PVPTMHWVGPDDRLVGNSS-------RAWAFPNGTLEI---GVTGAGDAGAYTCIATNPA 357
Query: 346 GNASGEISL 354
G A+ + L
Sbjct: 358 GEATARVEL 366
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 50/190 (26%), Positives = 81/190 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP C C+ S LC +P +D L L +N I L F+++ GL++
Sbjct: 17 CPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQALGPPDFRNMTGLVD 76
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + I + +F L L + L N++ L + G L+ L L+GN +
Sbjct: 77 LT---LSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHLILSGNQLG 133
Query: 143 ELRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ G F L L+ +++ + + V + + AL +LNL+ N + L VF
Sbjct: 134 RIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNLIDALPPGVFAQLS 193
Query: 202 NLKTLSLDGN 211
L L L N
Sbjct: 194 QLSRLDLTSN 203
>UNIPROTKB|Q2I0M4 [details] [associations]
symbol:LRRC26 "Leucine-rich repeat-containing protein 26"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015459 "potassium channel regulator activity"
evidence=IDA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IDA] GO:GO:0005737 GO:GO:0005856 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008076
GO:GO:0015459 GO:GO:0005216 InterPro:IPR000372 SMART:SM00013
EMBL:AL929554 EMBL:DQ355157 EMBL:EU588721 EMBL:BC140911
IPI:IPI00374551 IPI:IPI00973389 RefSeq:NP_001013675.1
UniGene:Hs.669977 ProteinModelPortal:Q2I0M4 SMR:Q2I0M4
STRING:Q2I0M4 PhosphoSite:Q2I0M4 DMDM:160410009 PaxDb:Q2I0M4
PRIDE:Q2I0M4 Ensembl:ENST00000371542 GeneID:389816 KEGG:hsa:389816
UCSC:uc004clp.2 CTD:389816 GeneCards:GC09M140063 H-InvDB:HIX0035220
HGNC:HGNC:31409 MIM:613505 neXtProt:NX_Q2I0M4 PharmGKB:PA134952867
eggNOG:NOG235918 HOGENOM:HOG000113367 HOVERGEN:HBG096585
InParanoid:Q2I0M4 OMA:DAAFSHC OrthoDB:EOG4V438G ChiTaRS:LRRC26
GenomeRNAi:389816 NextBio:103112 Bgee:Q2I0M4 CleanEx:HS_LRRC26
Genevestigator:Q2I0M4 Uniprot:Q2I0M4
Length = 334
Score = 199 (75.1 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 57/174 (32%), Positives = 87/174 (50%)
Query: 14 GTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKE 73
G+ G+PD CP+ C C + A C + A+P L ++ L L++N++ L
Sbjct: 36 GSLGAPD---CPEVCTC---VPGGLASCSALSLPAVPPGLSLRLRALLLDHNRVRALPPG 89
Query: 74 AFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKV 133
AF G L QR+ L+ +G+ VH F L L +DLS NQ+ L TF L+
Sbjct: 90 AFAGAGAL--QRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFAPLRALRN 147
Query: 134 LYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
L L GN + L LP L+++ LQ ++ ++ L L AL++L+L GN
Sbjct: 148 LSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGN 201
Score = 180 (68.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 57/202 (28%), Positives = 88/202 (43%)
Query: 79 GL-LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
GL L L+ + L ++ +R + F L +DL +N + +H F G L++L L+
Sbjct: 68 GLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLS 127
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
N + L G F L L+ + L ++ + AL L L SL+L N L L+ +
Sbjct: 128 ANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLL 187
Query: 198 FPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL---YSHPLSCTEPGMLQTKHWDDVKA 254
P L L L GNPW C C LR WL + L + + C PG L
Sbjct: 188 GRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLSPLTAFSD 247
Query: 255 QEFA-CPPNVTIKESMVIREAG 275
F+ C + +++ V+ G
Sbjct: 248 AAFSHCAQPLALRDLAVVYTLG 269
>MGI|MGI:1917943 [details] [associations]
symbol:Gpr125 "G protein-coupled receptor 125" species:10090
"Mus musculus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0009897 "external side of plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000203 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR007110 InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00303 MGI:MGI:1917943 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009897 GO:GO:0004930 GO:GO:0007218
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 eggNOG:NOG307919 HOVERGEN:HBG051777
GeneTree:ENSGT00390000016104 HOGENOM:HOG000112767 CTD:166647
KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R EMBL:AC102501 EMBL:AC130666
EMBL:BC019649 EMBL:BC052391 EMBL:BC058251 IPI:IPI00751912
RefSeq:NP_598672.1 UniGene:Mm.272974 ProteinModelPortal:Q7TT36
SMR:Q7TT36 STRING:Q7TT36 MEROPS:S63.950 PhosphoSite:Q7TT36
PRIDE:Q7TT36 Ensembl:ENSMUST00000030971 GeneID:70693 KEGG:mmu:70693
UCSC:uc008xjz.2 InParanoid:Q7TT36 NextBio:332107 Bgee:Q7TT36
CleanEx:MM_GPR125 Genevestigator:Q7TT36
GermOnline:ENSMUSG00000029090 Uniprot:Q7TT36
Length = 1310
Score = 210 (79.0 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 66/258 (25%), Positives = 116/258 (44%)
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
V + LS+N+I+ L +F G L+ L L N I+ + G F L LK ++L + +I
Sbjct: 73 VTLILSNNKISELKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGC 132
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
++ D LT L LNL+GN LS+ F +L++L CDC++ W+
Sbjct: 133 LNADVFRGLTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVK 192
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PP------NVTIKESMVIREAGGNVTM 280
+ + C P LQ + VK + C PP +T V+ E G ++
Sbjct: 193 ERNITVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYMTPSHRQVVFE-GDSLPF 251
Query: 281 SCYV-YGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV---SITLFNVTDLDAGE 336
C Y D + +LW +G+++ + E+ + S+ ++T+ N+ G
Sbjct: 252 QCMASYIDQDMQVLWYQDGRIVETDESQGIFVEKS-MIHNCSLIASALTISNIQAGSTGN 310
Query: 337 YTCYAENIRGNASGEISL 354
+ C+ + RGN + + +
Sbjct: 311 WGCHVQTKRGNNTRTVDI 328
Score = 155 (59.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 42/112 (37%), Positives = 61/112 (54%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P TL + L L+NNKIS L +F + LL +R+ L+N+ I + F L+ L
Sbjct: 65 PDTLPNRTVTLILSNNKISELKNGSFSGLSLL--ERLDLRNNLISRIAPGAFWGLSSLKR 122
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
+DL++N+I L+ D F G L L L+GN T L G F L L+++E Q
Sbjct: 123 LDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQ 174
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 204 (76.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 73/227 (32%), Positives = 99/227 (43%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 186 LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 245
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 246 TLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 303
Query: 249 WDD----VKAQEFACP-PNVTIKESM-VIREAGGNVTMSCYVYGDPEPTILWLLNGQVLH 302
+ D + F C ++ +++ V + G V C GDP P ILWL + L
Sbjct: 304 FKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 363
Query: 303 NSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 364 SAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 404
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 50/206 (24%), Positives = 89/206 (43%)
Query: 65 NKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDT 124
N +S + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+I L
Sbjct: 2 NIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 59
Query: 125 FLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
F LK L + N + + F L L+ + L+ C + S+ +AL HL L L L
Sbjct: 60 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 119
Query: 185 NGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGML 244
+ + + F LK L + P+ L S +H + T L
Sbjct: 120 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-CNLTAVPYL 178
Query: 245 QTKHWDDVKAQEFACPPNVTIKESMV 270
+H ++ + P TI+ SM+
Sbjct: 179 AVRHLVYLRFLNLSYNPIGTIEGSML 204
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 203 (76.5 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 61/191 (31%), Positives = 90/191 (47%)
Query: 57 IQVLDLNNN-KISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL++N ++ + F +G L ++L G++E+ F+ L L + L DN
Sbjct: 107 LEQLDLSDNAQLRSVDPATFHGLG--RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 164
Query: 116 QIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ L DTF LGN L L+L+GN I+ + F L L + L ++ VH A
Sbjct: 165 ALQALPDDTFRDLGN--LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 222
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L L +L L N L L P L+ L L+ NPW CDC R WL K + S
Sbjct: 223 RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSS 282
Query: 234 HPLSCTEPGML 244
+ C+ P L
Sbjct: 283 SEVPCSLPQRL 293
Score = 185 (70.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 62/217 (28%), Positives = 104/217 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + K + C A+P + + Q + L+ N+IS++ +F++ NL
Sbjct: 27 CPGACVC-YNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACR--NL 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
++L ++ + + F L +L ++DLSDN Q+ + TF G RL L+L+ +
Sbjct: 84 TILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ 143
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + LQ + ++ D L L L L+GNR+ + E F +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 203
Query: 203 LKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLS 237
L L L N H +FR+ L+ L+++ LS
Sbjct: 204 LDRLLLHQNR-VAHVHPHAFRDLGRLMTLYLFANNLS 239
Score = 43 (20.2 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 489 HLPTSTYGNIFISVS---VSQEPPGSDPPKYP 517
H+ S +G + S + P GS+PP +P
Sbjct: 378 HINDSPFGTLPGSAEPPLTAVRPEGSEPPGFP 409
Score = 42 (19.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 530 GTGPG-TNPAYFATLP--RRPRSKVIEPSSLVRVGPKYDNMGPRVTAG 574
G+GP N + F TLP P + P P + GPR G
Sbjct: 373 GSGPRHINDSPFGTLPGSAEPPLTAVRPEG--SEPPGFPTSGPRRRPG 418
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 206 (77.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 70/281 (24%), Positives = 130/281 (46%)
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
+GL +L+ + ++ + +V + + + L +DL+ N I + + F RLK L +N
Sbjct: 236 VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 138 G-NPITELRAGQFPKLPYLKTIEL-QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
+ + LP L +E + ++ +H+ A + ALESL LN N L + +
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQK 355
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL---YSHPLS--CTEPGMLQTKHWD 250
PNL+ +S+ NP CDC + +W+ +K + PLS C P +
Sbjct: 356 TVESLPNLREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYKGHQVK 411
Query: 251 DVKAQEFA--CPPNVTIKESMVIR---EAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSS 305
+V Q+ + C P ++ +S R + G V + C +PEP I W+ + + +
Sbjct: 412 EVLIQDSSEQCLPMIS-HDSFPNRLNVDIGTTVFLDCRAMAEPEPEIYWVT--PIGNKIT 468
Query: 306 FDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ L ++ ++ + N+ D+G YTC A+N++G
Sbjct: 469 VETLSDKYK---LSSEGTLEISNIQIEDSGRYTCVAQNVQG 506
Score = 161 (61.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/158 (25%), Positives = 77/158 (48%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+ + L L N+I+ +T + + NLQ +Y+ ++ I + F L L+ + L+
Sbjct: 119 TQLTTLHLEENQITEMTDYCLQDLS--NLQELYINHNQISTISAHAFAGLKNLLRLHLNS 176
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ + F L++L + NP+ + F L L+++ L + + +AL+
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLANLRSLVLAGMYLTDIPGNALV 236
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L +LESL+ N+L + + PNLK L L+ NP
Sbjct: 237 GLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNP 274
Score = 153 (58.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 55/205 (26%), Positives = 85/205 (41%)
Query: 15 TTGSPDWTDCPDTCRCK---W-----TLGKKSAL-CKDANFTALPSTLDSDIQVLDLNNN 65
T S ++CP C C+ W T + + + C D T +PS L SD QVL L +N
Sbjct: 23 TESSIQNSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSN 82
Query: 66 KISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTF 125
I+ E + L NL + + + LT L + L +NQI +
Sbjct: 83 NIAKTVDELQQ---LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCL 139
Query: 126 LGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLN 185
L+ LY+N N I+ + A F L L + L ++ + LE L +
Sbjct: 140 QDLSNLQELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIG 199
Query: 186 GNRLKHLSESVFFPTPNLKTLSLDG 210
N + + + F P NL++L L G
Sbjct: 200 ENPVIGILDMNFKPLANLRSLVLAG 224
Score = 133 (51.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 44/163 (26%), Positives = 72/163 (44%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P + + +D N+ +++ + +L LQ N+ + V D + L L E
Sbjct: 46 PQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQ----SNNIAKTV--DELQQLFNLTE 99
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVH 169
+D S N + + +L L+L N ITE+ L L+ + + H QI ++
Sbjct: 100 LDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTIS 159
Query: 170 KDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
A L L L+LN N+LK + F TPNL+ L + NP
Sbjct: 160 AHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 47/187 (25%), Positives = 86/187 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++++L + N + + FK L NL+ + L + ++ + L L + DN
Sbjct: 192 NLEILMIGENPVIGILDMNFKP--LANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDN 249
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC-QIHSVHKDALI 174
++ + Q LK L LN NPI +++ G F + LK + + + ++ SV + AL
Sbjct: 250 KLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALD 309
Query: 175 HLTALESLNLNGN-RLKHLSESVFFPTPNLKTLSLDGNPWCCDCH--LRSFRNWLLKSKL 231
+L L L N +L ++ F P L++L L+ N + S N L + +
Sbjct: 310 NLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQKTVESLPN-LREISI 368
Query: 232 YSHPLSC 238
+S+PL C
Sbjct: 369 HSNPLRC 375
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 540 FATLPRRPRSKVIEPS--SLVRVGPK-YDNMGPRVTAGGASILSLPDATSTE 588
F L + P K+ E +++R+ +NMG V+ ++ +LP+ T E
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 204 (76.9 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
C C+C K +A+CK ++ ++P LD VLDL+NN+IS L+ + NL
Sbjct: 18 CQSGCKCPT---KTTAVCKGSSLRSIPILLDPRTTVLDLSNNRISRLSADELSLYP--NL 72
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+++ L N+ I + D F L L +DLS N + L + F LK L ++ N + +
Sbjct: 73 EQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDV-Q 131
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F L L+T+ + ++ + L L+ L +L+L+ N+L + SV L
Sbjct: 132 LGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGL 191
Query: 204 KTLSLDGN 211
+TL L N
Sbjct: 192 ETLKLKQN 199
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 42/166 (25%), Positives = 79/166 (47%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ LD++ N I + + A GL L+ + L N+ + + +T+ L L +DLS N
Sbjct: 214 ELKHLDVSENLIGDIEEGAL--YGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSN 270
Query: 116 QIAWLHQDTFLGNDRLKVLYLN-GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
L +F G L+ L ++ + ++ F +L L + + + +H A
Sbjct: 271 LFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFN 330
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ L L+L+ N L++++ + PN++ L L N W C C LR
Sbjct: 331 PIPPLSHLDLSNNELRYVAPGML-QWPNIRNLHLANNDWHCSCDLR 375
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 47/167 (28%), Positives = 80/167 (47%)
Query: 48 ALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
+LP+ + S +++ L +++N + L E F GL LQ + + ++ + + K L
Sbjct: 108 SLPNEVFSKLKNLKTLIISSNDVQ-LGPECFA--GLSQLQTLSIADNRLSFLPPSVLKPL 164
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
+ L +DLS N++ + L+ L L N ++ L G F LK +++
Sbjct: 165 SGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENL 224
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
I + + AL L LE+LNL N+L L + + P LKTL L N
Sbjct: 225 IGDIEEGALYGLEKLETLNLTNNQLVRLPGNTW-SLPALKTLDLSSN 270
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L L N +S L F S L+ + + + I ++ L L ++L++NQ
Sbjct: 191 LETLKLKQNLLSSLETGMFLS--QKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQ 248
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ-IHSVHKDALIH 175
+ L +T+ LK L L+ N L F LP L+ + + H + + ++ +
Sbjct: 249 LVRLPGNTW-SLPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQ 307
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L++L L+++ + L H+ S F P P L L L N
Sbjct: 308 LSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNN 343
>UNIPROTKB|F1PA06 [details] [associations]
symbol:GPR125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR000203 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR007110 InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004930
GO:GO:0007218 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00390000016104 OMA:HHIPVNV
EMBL:AAEX03002600 EMBL:AAEX03002601 Ensembl:ENSCAFT00000026181
Uniprot:F1PA06
Length = 1230
Score = 209 (78.6 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 65/254 (25%), Positives = 115/254 (45%)
Query: 112 LSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD 171
LS+N+I+ L +F G L+ L L N I+ + G F L LK ++L + +I ++ D
Sbjct: 2 LSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNAD 61
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL 231
LT L LNL+GN LS+ F +L++L CDC++ W+ + +
Sbjct: 62 IFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNI 121
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQEFAC-PP------NVTIKESMVIREAGGNVTMSCYV 284
C P LQ + VK + C PP +T V+ E G ++ C
Sbjct: 122 TVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYMTPSHRQVVFE-GDSLPFQCMA 180
Query: 285 -YGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV---SITLFNVTDLDAGEYTCY 340
Y D + +LW +G+++ + E+ + + S+ ++T+ N+ G + C+
Sbjct: 181 SYIDQDMQVLWYQDGRIVETDESQGIFVEK-NMIHNCSLIASALTISNIQAGSTGNWGCH 239
Query: 341 AENIRGNASGEISL 354
+ RGN + + +
Sbjct: 240 VQTKRGNNTRTVDI 253
Score = 139 (54.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLH 121
L+NNKIS L +F + LL +R+ L+N+ I + F L+ L +DL++N+I L+
Sbjct: 2 LSNNKISELKNGSFSGLSLL--ERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLN 59
Query: 122 QDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
D F G L L L+GN + L G F L L+++E Q
Sbjct: 60 ADIFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQ 99
Score = 46 (21.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 166 HSVHKDALIHLTALES-LNLNGNRLKH 191
HSV D +H+ LE+ NG+ +H
Sbjct: 1059 HSVDNDLKMHVAPLEAQFRTNGHPSRH 1085
>UNIPROTKB|D3ZZF2 [details] [associations]
symbol:D3ZZF2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000203 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR007110 InterPro:IPR017981
Pfam:PF00002 Pfam:PF01825 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897
GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00390000016104
CTD:166647 KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R IPI:IPI00364572
RefSeq:XP_003752785.1 UniGene:Rn.22146 Ensembl:ENSRNOT00000036646
GeneID:305408 KEGG:rno:305408 ArrayExpress:D3ZZF2 Uniprot:D3ZZF2
Length = 1307
Score = 209 (78.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 66/258 (25%), Positives = 116/258 (44%)
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
V + LS+N+I+ L +F G L+ L L N I+ + G F L LK ++L + +I
Sbjct: 70 VTLILSNNKISELKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGC 129
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
++ D LT L LNL+GN LS+ F +L++L CDC++ W+
Sbjct: 130 LNADVFRGLTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVK 189
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PP------NVTIKESMVIREAGGNVTM 280
+ + C P LQ + VK + C PP +T V+ E G ++
Sbjct: 190 ERNITVRDTRCVYPKSLQAQPVTGVKQELLTCGPPLELPSFYMTPSHRQVVFE-GDSLPF 248
Query: 281 SCYV-YGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV---SITLFNVTDLDAGE 336
C Y D + +LW +G+++ + E+ + S+ ++T+ N+ G
Sbjct: 249 QCMASYIDQDMQVLWYQDGRIVETDESQGIFVEKS-MIHNCSLIASALTISNIQAGSTGN 307
Query: 337 YTCYAENIRGNASGEISL 354
+ C+ + RGN + + +
Sbjct: 308 WGCHIQTKRGNNTRTVDI 325
Score = 155 (59.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 42/112 (37%), Positives = 61/112 (54%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P TL + L L+NNKIS L +F + LL +R+ L+N+ I + F L+ L
Sbjct: 62 PDTLPNRTVTLILSNNKISELKNGSFSGLSLL--ERLDLRNNLISRIAPGAFWGLSSLKR 119
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
+DL++N+I L+ D F G L L L+GN T L G F L L+++E Q
Sbjct: 120 LDLTNNRIGCLNADVFRGLTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQ 171
>UNIPROTKB|E1C199 [details] [associations]
symbol:GPR125 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009897 "external side of plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000203
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR007110
InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00303 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00390000016104 OMA:HHIPVNV EMBL:AADN02015333
EMBL:AADN02015334 EMBL:AADN02015335 EMBL:AADN02015336
EMBL:AADN02015337 EMBL:AADN02015338 EMBL:AADN02015339
EMBL:AADN02015340 EMBL:AADN02015341 EMBL:AADN02015342
IPI:IPI00599567 ProteinModelPortal:E1C199
Ensembl:ENSGALT00000023270 NextBio:20825394 Uniprot:E1C199
Length = 1322
Score = 209 (78.6 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 66/258 (25%), Positives = 118/258 (45%)
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
V + LS+N+I L +F G + L+ L L N I+ + G F L LK ++L + +I
Sbjct: 87 VTLILSNNRITELKNCSFSGLNLLERLDLKNNLISTIDPGAFLGLSSLKRLDLTNNRIGC 146
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
++ D L L LNL+GN L++ F +LK+L + CDC++ WL
Sbjct: 147 LNADVFKGLVNLIRLNLSGNLFSTLTQGTFDHLGSLKSLEFQTDYLLCDCNILWMHQWLK 206
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PP------NVTIKESMVIREAGGNVTM 280
+ + C P LQ++ VK + C PP +T V+ E G ++
Sbjct: 207 ERNITVRETKCAYPKSLQSQTVTGVKQELLTCEPPLELPSFYMTPSHRQVVFE-GDSLPF 265
Query: 281 SCYV-YGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV---SITLFNVTDLDAGE 336
C Y D + +LW +G+++ + E+ + + S+ ++T+ N+ G
Sbjct: 266 QCMASYIDQDMQVLWYQDGKIVETDESQGIFVEK-NMIHNCSLIASALTISNIQAGSTGN 324
Query: 337 YTCYAENIRGNASGEISL 354
+ C+ + RGN + + +
Sbjct: 325 WGCHVQTRRGNNTRTVDI 342
Score = 142 (55.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 40/112 (35%), Positives = 60/112 (53%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P L + L L+NN+I+ L +F + LL +R+ LKN+ I + F L+ L
Sbjct: 79 PEALPNRTVTLILSNNRITELKNCSFSGLNLL--ERLDLKNNLISTIDPGAFLGLSSLKR 136
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
+DL++N+I L+ D F G L L L+GN + L G F L LK++E Q
Sbjct: 137 LDLTNNRIGCLNADVFKGLVNLIRLNLSGNLFSTLTQGTFDHLGSLKSLEFQ 188
Score = 45 (20.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 166 HSVHKDALIHLTALE-SLNLNGNRLKH 191
HSV D +H+ LE NG+ +H
Sbjct: 1146 HSVDNDIKMHVAPLEVQFRTNGHPSRH 1172
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 308 LLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAE 342
L E G+ + S+S++L + + L+ E++ A+
Sbjct: 963 LATNEHGELTHQDSLSVSLVSTSALE-NEHSFQAQ 996
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 207 (77.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 67/243 (27%), Positives = 110/243 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C + C C+ G + C++ +L + L L+ N ++ L F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++L ++ I+++ F L L + L++N++ L DTFLG + L+ L ++ N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE-SVFFPT 200
+ + F KL L+ + L + S+ + L L L+L GNRLK L +
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHM 224
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS---CTEPGMLQTKHWDDVKAQEF 257
+ L L+ NPW C C L S ++WL S YS + C P L + D+V QE
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWL-DSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
Query: 258 ACP 260
CP
Sbjct: 284 -CP 285
Score = 182 (69.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKK--SALCKDANFTALPSTLDSDI--QVLDLNNNKISYLT 71
T SP +CP C C + + C++ ++ + + L N I+ +
Sbjct: 366 TKSPVPLECPTACSCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVR 425
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F L+L ++L N+ I + F LT L + L+ N+I L + F G L
Sbjct: 426 RTDFLEATGLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSL 483
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
+ L+L N I E+++G F +P L+ + L + + ++ LT L LNL N
Sbjct: 484 QYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR-LNLRSNHFTS 542
Query: 192 LSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKH 248
L S V +L + L NPW C C + + W+ LK + + C P
Sbjct: 543 LPVSGVLDQLKSLIQIDLHDNPWDCTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETD 602
Query: 249 WDDVKAQEFACP 260
+K+ E CP
Sbjct: 603 MRSIKS-ELLCP 613
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 202 (76.2 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 61/191 (31%), Positives = 90/191 (47%)
Query: 57 IQVLDLNNN-KISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL++N ++ + F+ +G L ++L G++E+ F+ L L + L DN
Sbjct: 107 LEQLDLSDNAQLRAVDPATFRGLG--RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 164
Query: 116 QIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
+ L D F LGN L L+L+GN I + F L L + L ++ VH A
Sbjct: 165 GLQALPDDAFRDLGN--LTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 222
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L L +L L N L LS P L+ L L+ NPW CDC R WL + + S
Sbjct: 223 RDLGRLMTLYLFANNLSALSAEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQQFRGSS 282
Query: 234 HPLSCTEPGML 244
L C+ P L
Sbjct: 283 SELPCSLPPRL 293
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/217 (29%), Positives = 106/217 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + K + C A+P+ + + Q + L+ N+I+Y+ +F++ NL
Sbjct: 27 CPGACVC-YNEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRITYVPAASFRACR--NL 83
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDN-QIAWLHQDTFLGNDRLKVLYLNGNPIT 142
++L ++ + + F L +L ++DLSDN Q+ + TF G RL L+L+ +
Sbjct: 84 TILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQ 143
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
EL G F L L+ + LQ + ++ DA L L L L+GNR+ + E F +
Sbjct: 144 ELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHS 203
Query: 203 LKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLS 237
L L L N H +FR+ L+ L+++ LS
Sbjct: 204 LDRLLLHQNR-VAHVHPHAFRDLGRLMTLYLFANNLS 239
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 204 (76.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 73/227 (32%), Positives = 99/227 (43%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 283 LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 342
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 343 TLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 400
Query: 249 WDD----VKAQEFACP-PNVTIKESM-VIREAGGNVTMSCYVYGDPEPTILWLLNGQVLH 302
+ D + F C ++ +++ V + G V C GDP P ILWL + L
Sbjct: 401 FKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 460
Query: 303 NSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 461 SAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 501
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + ++ LC F A+P + ++ ++LDL N+I L +
Sbjct: 25 LGSVLSGSATGCPPRCEC--SAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ 82
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F S +L+ + L + + V F L L + L N++ + F G L
Sbjct: 83 DEFASFP--HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 140
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 141 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 192
Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 53/214 (24%), Positives = 95/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N +S + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 91 LEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 148
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 149 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 208
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
L L L + + + F LK L + P+ L S +H
Sbjct: 209 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-C 267
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T L +H ++ + P TI+ SM+
Sbjct: 268 NLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSML 301
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 204 (76.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 73/227 (32%), Positives = 99/227 (43%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 289 LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 348
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 349 TLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 406
Query: 249 WDD----VKAQEFACP-PNVTIKESM-VIREAGGNVTMSCYVYGDPEPTILWLLNGQVLH 302
+ D + F C ++ +++ V + G V C GDP P ILWL + L
Sbjct: 407 FKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLV 466
Query: 303 NSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 467 SAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 507
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + ++ LC F A+P + ++ ++LDL N+I L +
Sbjct: 31 LGSVLSGSATGCPPRCEC--SAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ 88
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F S +L+ + L + + V F L L + L N++ + F G L
Sbjct: 89 DEFASFP--HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 198
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 53/214 (24%), Positives = 95/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N +S + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 97 LEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 214
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
L L L + + + F LK L + P+ L S +H
Sbjct: 215 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-C 273
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T L +H ++ + P TI+ SM+
Sbjct: 274 NLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSML 307
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 204 (76.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 74/228 (32%), Positives = 97/228 (42%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI + +L L+ I+L Q+ V A L L LN++GN+L
Sbjct: 289 LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 348
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C P +Q K
Sbjct: 349 TLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNR-QQP-TCATPEFVQGKE 406
Query: 249 WDD----VKAQEFACPPNVTIKE---SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVL 301
+ D + F C I++ V + G V C GDP P ILWL + L
Sbjct: 407 FKDFPDVLLPNYFTCR-RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHL 465
Query: 302 HNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
++ + D E + V D G Y C A N GN S
Sbjct: 466 VSAKSNGRLTVFPDGTLE----VRYAQVQD--NGTYLCIAANAGGNDS 507
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + ++ LC F A+P + ++ ++LDL N+I L +
Sbjct: 31 LGSVLSGSATGCPPRCEC--SAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ 88
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F S +L+ + L + + V F L L + L N++ + F G L
Sbjct: 89 DEFASFP--HLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLT 146
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 147 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 198
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N +S + AF + L +L+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 97 LEELELNENIVSAVEPGAFNN--LFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 154
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 155 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 214
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
+L L L + + + F LK L + P+ L S +H
Sbjct: 215 HSLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITH-C 273
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T L +H ++ + P TI+ SM+
Sbjct: 274 NLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSML 307
>MGI|MGI:1924118 [details] [associations]
symbol:Lrrc52 "leucine rich repeat containing 52"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1924118
GO:GO:0016021 GO:GO:0005886 GO:GO:0005216 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104451 CTD:440699 eggNOG:NOG307084
HOGENOM:HOG000233985 HOVERGEN:HBG056592 OMA:YQNARRK
OrthoDB:EOG44MXSK EMBL:BC087947 IPI:IPI00357045
RefSeq:NP_001013400.1 UniGene:Mm.159799 ProteinModelPortal:Q5M8M9
SMR:Q5M8M9 PRIDE:Q5M8M9 Ensembl:ENSMUST00000036643 GeneID:240899
KEGG:mmu:240899 UCSC:uc007dkz.1 InParanoid:Q5M8M9 NextBio:384798
Bgee:Q5M8M9 CleanEx:MM_LRRC52 Genevestigator:Q5M8M9
GermOnline:ENSMUSG00000040485 Uniprot:Q5M8M9
Length = 314
Score = 196 (74.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 70/247 (28%), Positives = 114/247 (46%)
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
LN +R+YL N+ I + +L+ LV +D +N+I + TF+G RL L L+ N
Sbjct: 53 LNTRRLYLNNNKITSLPALQLGFLSDLVYLDCQNNRIREVMDYTFIGIFRLIYLDLSSNN 112
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI--HLTALESLNLNGNRLKHLSESVFF 198
+T + F L L + + H H ++ D + + T+L L+L L + + F
Sbjct: 113 LTSISPFSFSVLTNLVRLNISH-NPHLLYLDKYVFANTTSLRYLDLRNTGLHIIDHNGFH 171
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP----LSCTEPGMLQTKHWDDVKA 254
L+TL L GNPW C+C F LL S + HP +CTEP L K W K
Sbjct: 172 HLVVLQTLYLSGNPWICNCSFLDFTIHLLVSHM-DHPDAQNATCTEPAEL--KGWPITKV 228
Query: 255 Q---EFACPPNVTIKESMVIREAGGNV----TMSCYVYGDPEPTILWLLNGQVLHNSSFD 307
++ C ++ ++ + + G + T++ ++ G + +L L SS D
Sbjct: 229 GNPLQYMCITHLDQQDYIFLLLIGFCIFAAGTVAAWLTG-----VCAVLYQNALRTSSGD 283
Query: 308 LLEEEEG 314
E+E G
Sbjct: 284 DTEDETG 290
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 50/167 (29%), Positives = 85/167 (50%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C+ + C D + T P+ + + + L LNNNKI+ L A + +G L+
Sbjct: 26 CPNKCVCQ----DQEVACIDLHLTEYPADIPLNTRRLYLNNNKITSLP--ALQ-LGFLS- 77
Query: 84 QRIYL--KNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP- 140
+YL +N+ IREV TF + L+ +DLS N + + +F L L ++ NP
Sbjct: 78 DLVYLDCQNNRIREVMDYTFIGIFRLIYLDLSSNNLTSISPFSFSVLTNLVRLNISHNPH 137
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+ L F L+ ++L++ +H + + HL L++L L+GN
Sbjct: 138 LLYLDKYVFANTTSLRYLDLRNTGLHIIDHNGFHHLVVLQTLYLSGN 184
>UNIPROTKB|Q3SXY7 [details] [associations]
symbol:LRIT3 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
EMBL:CH471057 InterPro:IPR013098 Pfam:PF07679 EMBL:AC005509
eggNOG:NOG310852 HOGENOM:HOG000063714 HOVERGEN:HBG108105
EMBL:AK126648 EMBL:BC104037 IPI:IPI00394850 IPI:IPI00746317
RefSeq:NP_940908.3 UniGene:Hs.308127 ProteinModelPortal:Q3SXY7
SMR:Q3SXY7 PhosphoSite:Q3SXY7 DMDM:269849616 PRIDE:Q3SXY7
Ensembl:ENST00000327908 Ensembl:ENST00000379920
Ensembl:ENST00000409621 GeneID:345193 KEGG:hsa:345193
UCSC:uc003hzw.4 UCSC:uc003hzx.4 CTD:345193 GeneCards:GC04P110772
HGNC:HGNC:24783 HPA:HPA013454 neXtProt:NX_Q3SXY7
PharmGKB:PA162394355 InParanoid:Q3SXY7 OMA:RTGDHPE
OrthoDB:EOG4THVT6 GenomeRNAi:345193 NextBio:98830 Bgee:Q3SXY7
CleanEx:HS_LRIT3 Genevestigator:Q3SXY7 Uniprot:Q3SXY7
Length = 634
Score = 204 (76.9 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 79/321 (24%), Positives = 138/321 (42%)
Query: 49 LPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILV 108
LP+ L D L + I ++ EAF L+ LQ +++ + + + +F L L
Sbjct: 6 LPTNLPVDTVKLRIEKTVIRRISAEAFYY--LVELQYLWVTYNSVASIDPSSFYNLKQLH 63
Query: 109 EVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSV 168
E+ L N +A + L L+ L L+ N IT + L L ++L ++ ++
Sbjct: 64 ELRLDGNSLAAFPWASLLDMPLLRTLDLHNNKITSVPNEALRYLKNLAYLDLSSNRLTTL 123
Query: 169 HKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLK 228
D L T L S V +P+ L L NPW CDCH+ L K
Sbjct: 124 PPDFLESWTHLVST----------PSGVLDLSPSRIILGLQDNPWFCDCHISKMIE-LSK 172
Query: 229 ----SKLYSHPL-SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVTMSCY 283
+ + PL +C+EP L + + E P+V + ++ G NV + C
Sbjct: 173 VVDPAIVLLDPLMTCSEPERLTGILFQRAEL-EHCLKPSVMTSATKIMSALGSNVLLRCD 231
Query: 284 VYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAEN 343
G P P I W + N + +++E + + +S+T ++ DAG+Y C A+N
Sbjct: 232 ATGFPTPQITWTRSDSSPVN--YTVIQESPEEGVRWSIMSLT--GISSKDAGDYKCKAKN 287
Query: 344 IRGNASGEISLDLPEINLATT 364
+ G + +++ + + + TT
Sbjct: 288 LAGMSEAVVTVTV--LGITTT 306
>UNIPROTKB|Q6PJG9 [details] [associations]
symbol:LRFN4 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 4" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:BC000207 EMBL:BC015581 EMBL:BC027475
EMBL:BC094813 EMBL:AB209005 IPI:IPI00172530 RefSeq:NP_076941.2
UniGene:Hs.209979 UniGene:Hs.714189 ProteinModelPortal:Q6PJG9
SMR:Q6PJG9 STRING:Q6PJG9 PhosphoSite:Q6PJG9 DMDM:62286924
PaxDb:Q6PJG9 PRIDE:Q6PJG9 Ensembl:ENST00000309602 GeneID:78999
KEGG:hsa:78999 UCSC:uc001ojq.1 CTD:78999 GeneCards:GC11P066625
HGNC:HGNC:28456 MIM:612810 neXtProt:NX_Q6PJG9 PharmGKB:PA134922153
eggNOG:NOG246097 InParanoid:Q6PJG9 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM PhylomeDB:Q6PJG9 GenomeRNAi:78999 NextBio:67607
ArrayExpress:Q6PJG9 Bgee:Q6PJG9 CleanEx:HS_LRFN4
Genevestigator:Q6PJG9 GermOnline:ENSG00000173621 Uniprot:Q6PJG9
Length = 635
Score = 204 (76.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 85/309 (27%), Positives = 136/309 (44%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I+ + AF L +L+ ++L + + E+ + + L + LS NQ+
Sbjct: 77 LTLSRNAITRIGARAFGD--LESLRSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGR 134
Query: 120 LHQ---DTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ D FL + L+ L L+ N + ++ +P L T+ L H I ++ A L
Sbjct: 135 IAPGAFDDFL--ESLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHNLIDALPPGAFAQL 192
Query: 177 TALESLNLNGNRLKHLSESVFFP-------TPNLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
L L+L NRL L+ F +P LS GNP C+C L WL +
Sbjct: 193 GQLSRLDLTSNRLATLAPDPLFSRGRDAEASPAPLVLSFSGNPLHCNCELL----WLRRL 248
Query: 230 KLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKES--MVIREAGGNVTMSCYVYGD 287
+C P L +++ V EF+C P + + + + + E G T+ C GD
Sbjct: 249 ARPDDLETCASPPGLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLE-GQRATLRCRALGD 307
Query: 288 PEPTILWL-LNGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDL-DAGEYTCYAENIR 345
P PT+ W+ + +++ NSS A ++ I VT DAG YTC A N
Sbjct: 308 PAPTMHWVGPDDRLVGNSS-------RARAFPNGTLEI---GVTGAGDAGGYTCIATNPA 357
Query: 346 GNASGEISL 354
G A+ + L
Sbjct: 358 GEATARVEL 366
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/190 (26%), Positives = 79/190 (41%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP C C+ S LC +P +D L L +N I L F+++ GL++
Sbjct: 17 CPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQALGPPDFRNMTGLVD 76
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + I + F L L + L N++ L + G L+ L L+GN +
Sbjct: 77 LT---LSRNAITRIGARAFGDLESLRSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLG 133
Query: 143 ELRAGQFPK-LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ G F L L+ ++L + + V + + AL +LNL+ N + L F
Sbjct: 134 RIAPGAFDDFLESLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHNLIDALPPGAFAQLG 193
Query: 202 NLKTLSLDGN 211
L L L N
Sbjct: 194 QLSRLDLTSN 203
>UNIPROTKB|Q9BTN0 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352 CTD:79414
KO:K16356 OMA:WAVGEEE OrthoDB:EOG4H465G EMBL:AK172754 EMBL:AY358127
EMBL:BC003578 IPI:IPI00001577 RefSeq:NP_078785.1 UniGene:Hs.143792
ProteinModelPortal:Q9BTN0 SMR:Q9BTN0 STRING:Q9BTN0
PhosphoSite:Q9BTN0 DMDM:62286945 PRIDE:Q9BTN0 DNASU:79414
Ensembl:ENST00000246529 GeneID:79414 KEGG:hsa:79414 UCSC:uc002oco.3
GeneCards:GC19P036427 HGNC:HGNC:28370 HPA:HPA048923 MIM:612809
neXtProt:NX_Q9BTN0 PharmGKB:PA134880779 eggNOG:NOG239228
InParanoid:Q9BTN0 PhylomeDB:Q9BTN0 ChiTaRS:LRFN3 GenomeRNAi:79414
NextBio:68379 Bgee:Q9BTN0 CleanEx:HS_LRFN3 Genevestigator:Q9BTN0
GermOnline:ENSG00000126243 Uniprot:Q9BTN0
Length = 628
Score = 202 (76.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 88/324 (27%), Positives = 137/324 (42%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I ++ AF L L+ ++L + + + + L L + LS+NQ+A
Sbjct: 88 LSLSRNTIRHVAAGAFAD--LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAA 145
Query: 120 LHQDTFLG-NDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
L + L+ L L+ N + +L +L + T+ L H + SV A L
Sbjct: 146 LAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHK 205
Query: 179 LESLNLNGNRLKHLS-ESVFFPTPNLK----------TLSLDGNPWCCDCHLRSFRNWLL 227
L L++ NRL + + +F P L L+ GNP C+C L WL
Sbjct: 206 LARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLAFGGNPLHCNCELV----WLR 261
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYVYG 286
+ +C P L +++ V +EF C PP VT + + AG + C G
Sbjct: 262 RLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVG 321
Query: 287 DPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIR 345
DPEP + W+ G++L NSS A F ++ L D G +TC A N
Sbjct: 322 DPEPRVRWVSPQGRLLGNSS-------RARA-FPNG-TLELLVTEPGDGGIFTCIAANAA 372
Query: 346 GNASGEISLDL---PEINLATTLS 366
G A+ + L + P LA + S
Sbjct: 373 GEATAAVELTVGPPPPPQLANSTS 396
Score = 141 (54.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 51/190 (26%), Positives = 81/190 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP CRC+ S LC A +P +LD L L +N I+ + + ++ GLL+
Sbjct: 28 CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIASVRRRDLANMTGLLH 87
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + IR V F L L + L N++ L + G L+ L L+ N +
Sbjct: 88 LS---LSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLA 144
Query: 143 ELRAGQFPKLPY-LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
L AG L+ ++L + + + +AL L + +L L+ N L + F
Sbjct: 145 ALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLH 204
Query: 202 NLKTLSLDGN 211
L L + N
Sbjct: 205 KLARLDMTSN 214
Score = 47 (21.6 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 16/63 (25%), Positives = 24/63 (38%)
Query: 507 EPPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAYFATLPRRPRSKVIEPSSLVRVGPKYDN 566
+PPG K P + + GP PA A P R+ + GP ++
Sbjct: 568 QPPGK--AKIPAPVSSVCSQTNGALGPTPTPAPPAPEPAALRAHTVVQLDCEPWGPGHEP 625
Query: 567 MGP 569
+GP
Sbjct: 626 VGP 628
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 204 (76.9 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 86/331 (25%), Positives = 145/331 (43%)
Query: 35 GKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIR 94
G K D NF L + L S + + +N +IS E GL +L+ + ++ +
Sbjct: 198 GNKVDAILDMNFRPL-ANLRS-LVLAGMNLREISDYALE-----GLQSLESLSFYDNQLA 250
Query: 95 EVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG-NPITELRAGQFPKLP 153
V R + + L +DL+ N + + F LK L LN + + LP
Sbjct: 251 RVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLP 310
Query: 154 YLKTIEL-QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L +++ + ++ +H A HL +E+L LN N L L + PNL+ + L GNP
Sbjct: 311 ELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNP 370
Query: 213 WCCDCHLRSFRNWLLKSKLYSHPLS--CTEPGMLQTKHWDDVKAQEFA--CPPNVTIKE- 267
CDC +R + N + P S C EP LQ +V +E C P ++ +
Sbjct: 371 IRCDCVIR-WANATGTRVRFIEPQSTLCAEPPDLQRLPVREVPFREMTDHCLPLISPRSF 429
Query: 268 --SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDA--LFEKSVS 323
S+ + +G ++ + C +PEP I W+ + L G ++ + +
Sbjct: 430 PPSLQVA-SGESMVLHCRALAEPEPEIYWVTP------AGLRLTPAHAGRRYRVYPEG-T 481
Query: 324 ITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
+ L VT +AG YTC A+N+ G + +S+
Sbjct: 482 LELRRVTAEEAGLYTCVAQNLVGADTKTVSV 512
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 55/201 (27%), Positives = 85/201 (42%)
Query: 21 W-TDCPDTCRCK---WTLGKKSAL------CKDANFTALPSTLDSDIQVLDLNNNKISYL 70
W CP C C+ W + S C D TA+P L + Q L L +N I +
Sbjct: 25 WHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQSNSIVRV 84
Query: 71 TKEAFKSIGLL-NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGND 129
+ +G L NL + L + + F L L+ + L +NQ+ L +F G
Sbjct: 85 DQS---ELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLA 141
Query: 130 RLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRL 189
L+ LYLN N + + F L L + L + ++ L LE L + GN++
Sbjct: 142 SLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKV 201
Query: 190 KHLSESVFFPTPNLKTLSLDG 210
+ + F P NL++L L G
Sbjct: 202 DAILDMNFRPLANLRSLVLAG 222
Score = 157 (60.3 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 42 KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
+D +F ALP L L L N+++ L +F GL +LQ +YL ++ + + F
Sbjct: 109 RDCDFHALPQLLS-----LHLEENQLTRLEDHSFA--GLASLQELYLNHNQLYRIAPRAF 161
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L+ L+ + L+ N + + F L++L + GN + + F L L+++ L
Sbjct: 162 SGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLA 221
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+ + AL L +LESL+ N+L + P LK L L+ NP
Sbjct: 222 GMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNP 272
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L+++ I V + YL L E+DLS N + F +L L+L N +T
Sbjct: 72 QTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTR 131
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F L L+ + L H Q++ + A L+ L L+LN N L+ + F PNL
Sbjct: 132 LEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNL 191
Query: 204 KTLSLDGN 211
+ L + GN
Sbjct: 192 EILMIGGN 199
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 204 (76.9 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 57/219 (26%), Positives = 100/219 (45%)
Query: 57 IQVLDLNNNKISY-LTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ LDL N ++ L+++ G+ NL+ + L + I+ + + LV + L N
Sbjct: 301 LRQLDLQANNLNGPLSEQTLP--GMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 358
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
QI L F G L L L+ N I + + L L ++L H + ++ D +
Sbjct: 359 QIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAP 418
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSH- 234
L +L L L GN + ++ + L++L + NP CDC +R F WL +S+L+S
Sbjct: 419 LPSLRELRLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSL 478
Query: 235 PLSCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMVIRE 273
SC P L+ V + +C + K++ I +
Sbjct: 479 SASCVTPPRLEGAPLLQVPVETLSCDMDNVEKDNANIMQ 517
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/158 (29%), Positives = 79/158 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L N + + A ++ L +R+ L N+ I+ + F LT LV ++LS+NQ
Sbjct: 203 LQALGLPGNALMSVPWNALSTLSAL--ERLDLANNKIKALGTADFVGLTSLVYLELSNNQ 260
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAG--QFPKLPYLKTIELQHCQIHS-VHKDAL 173
I+ + Q TF+ +L+VL L GN + + + L+ ++LQ ++ + + L
Sbjct: 261 ISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTL 320
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ LESLNLN N +K + L +LSL N
Sbjct: 321 PGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHN 358
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 50/164 (30%), Positives = 76/164 (46%)
Query: 51 STLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEV 110
STL S ++ LDL NNKI L F +GL +L + L N+ I + + TF L L +
Sbjct: 222 STL-SALERLDLANNKIKALGTADF--VGLTSLVYLELSNNQISSISQRTFVNLRKLEVL 278
Query: 111 DLSDNQIAWLHQDTFLGND--RLKVLYLNGNPIT-ELRAGQFPKLPYLKTIELQHCQIHS 167
L N++ Q + L+ L L N + L P + L+++ L I S
Sbjct: 279 KLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKS 338
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ AL + + L SL+L N++ L + FF L +L L N
Sbjct: 339 IQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYN 382
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 202 (76.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 72/281 (25%), Positives = 130/281 (46%)
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
+GL +L+ + ++ + +V + + + L +DL+ N I + + F RLK L +N
Sbjct: 236 VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 138 G-NPITELRAGQFPKLPYLKTIEL-QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
+ + LP L +E + ++ +H+ A + ALESL LN N L + +
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQK 355
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL---YSHPLS--CTEPGMLQTKHWD 250
PNL+ +S+ NP CDC + +W+ +K + PLS C P + +
Sbjct: 356 TVESLPNLREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYRGQQVK 411
Query: 251 DVKAQEFA--CPPNVTIKE--SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNS-S 305
+V Q+ + C P ++ + + + G V + C +PEP I W+ L N +
Sbjct: 412 EVLIQDSSEQCLPMISHDTFPNHLNMDIGTTVFLDCRAMAEPEPEIYWVTP---LGNKIT 468
Query: 306 FDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ L E+ E ++ I+ + D +G YTC A+N+ G
Sbjct: 469 VETLSEKY-KLSSEGTLEISKIQIED--SGRYTCVAQNVEG 506
Score = 159 (61.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 40/158 (25%), Positives = 77/158 (48%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+ + L L N+I+ + + + NLQ +Y+ ++ I + + F L L+ + L+
Sbjct: 119 TQLTTLHLEENQITEMNDYCLQDLS--NLQELYINHNQISTISANAFSGLKNLLRLHLNS 176
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ + F L++L + NP+ + F L L+++ L + + +AL+
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALV 236
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L +LESL+ N+L + + PNLK L L+ NP
Sbjct: 237 GLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNP 274
Score = 159 (61.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 56/205 (27%), Positives = 87/205 (42%)
Query: 16 TGSP-DWTDCPDTCRCK---W-----TLGKKSAL-CKDANFTALPSTLDSDIQVLDLNNN 65
TGS ++CP C C+ W T + + + C D T +PS L SD QVL L +N
Sbjct: 23 TGSSLQSSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSN 82
Query: 66 KISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTF 125
I+ E + L NL + + + LT L + L +NQI ++
Sbjct: 83 NIAKTVDELQQ---LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCL 139
Query: 126 LGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLN 185
L+ LY+N N I+ + A F L L + L ++ + LE L +
Sbjct: 140 QDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIG 199
Query: 186 GNRLKHLSESVFFPTPNLKTLSLDG 210
N + + + F P NL++L L G
Sbjct: 200 ENPVIGILDMNFKPLSNLRSLVLAG 224
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/163 (26%), Positives = 73/163 (44%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P + + +D N+ +++ + +L LQ N+ + V D + L L E
Sbjct: 46 PQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQ----SNNIAKTV--DELQQLFNLTE 99
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVH 169
+D S N + + +L L+L N ITE+ L L+ + + H QI ++
Sbjct: 100 LDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTIS 159
Query: 170 KDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+A L L L+LN N+LK + F TPNL+ L + NP
Sbjct: 160 ANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++++L + N + + FK + NL+ + L + ++ + L L + DN
Sbjct: 192 NLEILMIGENPVIGILDMNFKPLS--NLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDN 249
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC-QIHSVHKDALI 174
++ + Q LK L LN NPI +++ G F + LK + + + ++ SV + AL
Sbjct: 250 KLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALD 309
Query: 175 HLTALESLNLNGN-RLKHLSESVFFPTPNLKTLSLDGNPWCCDCH--LRSFRNWLLKSKL 231
+L L L N +L ++ F P L++L L+ N + S N L + +
Sbjct: 310 NLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPN-LREISI 368
Query: 232 YSHPLSC 238
+S+PL C
Sbjct: 369 HSNPLRC 375
Score = 39 (18.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 540 FATLPRRPRSKVIEPS--SLVRVGPK-YDNMGPRVTAGGASILSLPDATSTE 588
F L + P K+ E +++R+ +NMG V+ ++ +LP+ T E
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 202 (76.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 70/290 (24%), Positives = 134/290 (46%)
Query: 69 YLTKEAFKS-IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLG 127
YLT + +GL +L+ + ++ + +V + + + L +DL+ N I + + F
Sbjct: 226 YLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKN 285
Query: 128 NDRLKVLYLNG-NPITELRAGQFPKLPYLKTIEL-QHCQIHSVHKDALIHLTALESLNLN 185
RLK L +N + + LP L +E + ++ +H+ A + ALESL LN
Sbjct: 286 MLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLN 345
Query: 186 GNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL---YSHPLS--CTE 240
N L + + PNL+ +S+ NP CDC + +W+ +K + PLS C
Sbjct: 346 NNALNAVYQKTVESLPNLREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAM 401
Query: 241 PGMLQTKHWDDVKAQEFA--CPPNVTIKE--SMVIREAGGNVTMSCYVYGDPEPTILWLL 296
P + + +V Q+ + C P ++ + + + G + + C +PEP I W+
Sbjct: 402 PPEYRGQQVKEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTLFLDCRAMAEPEPEIYWVT 461
Query: 297 NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ + + + L ++ ++ + N+ D+G YTC A+N++G
Sbjct: 462 --PIGNKITVETLSDKYK---LSSEGTLEIANIQIEDSGRYTCVAQNVQG 506
Score = 166 (63.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 43/158 (27%), Positives = 78/158 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+ + L L N+IS +T + + NLQ +Y+ ++ I + + F L L+ + L+
Sbjct: 119 TQLTTLHLEENQISEMTDYCLQDLS--NLQELYINHNQISTISANAFSGLKNLLRLHLNS 176
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ + F L++L + NP+ + F L L+++ L + V +AL+
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDVPGNALV 236
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L +LESL+ N+L + + PNLK L L+ NP
Sbjct: 237 GLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNP 274
Score = 151 (58.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 22 TDCPDTCRCK---W-----TLGKKSAL-CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
++CP C C+ W T + + + C D T +P L SD QVL L +N I+
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKTVD 89
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
E + L NL + + + LT L + L +NQI+ + L+
Sbjct: 90 ELQQ---LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQ 146
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
LY+N N I+ + A F L L + L ++ + LE L + N + +
Sbjct: 147 ELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGI 206
Query: 193 SESVFFPTPNLKTLSLDG 210
+ F P NL++L L G
Sbjct: 207 LDMNFRPLSNLRSLVLAG 224
Score = 129 (50.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L+++ I + D + L L E+D S N + + +L L+L N I+E
Sbjct: 75 QVLLLQSNNIAKTV-DELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISE 133
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ L L+ + + H QI ++ +A L L L+LN N+LK + F TPNL
Sbjct: 134 MTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNL 193
Query: 204 KTLSLDGNP 212
+ L + NP
Sbjct: 194 EILMIGENP 202
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++++L + N + + F+ + NL+ + L + +V + L L + DN
Sbjct: 192 NLEILMIGENPVIGILDMNFRPLS--NLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDN 249
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC-QIHSVHKDALI 174
++ + Q LK L LN NPI +++ G F + LK + + + ++ SV + AL
Sbjct: 250 KLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALD 309
Query: 175 HLTALESLNLNGN-RLKHLSESVFFPTPNLKTLSLDGNPWCCDCH--LRSFRNWLLKSKL 231
+L L L N +L ++ F P L++L L+ N + S N L + +
Sbjct: 310 NLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPN-LREISI 368
Query: 232 YSHPLSC 238
+S+PL C
Sbjct: 369 HSNPLRC 375
Score = 39 (18.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 540 FATLPRRPRSKVIEPS--SLVRVGPK-YDNMGPRVTAGGASILSLPDATSTE 588
F L + P K+ E +++R+ +NMG V+ ++ +LP+ T E
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 67/280 (23%), Positives = 130/280 (46%)
Query: 78 IGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
+GL +L+ + ++ + +V + + + L +DL+ N I + + F RLK L +N
Sbjct: 236 VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 138 G-NPITELRAGQFPKLPYLKTIEL-QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
+ + LP L +E + ++ +H+ A + ALESL LN N L + +
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQK 355
Query: 196 VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL---YSHPLS--CTEPGMLQTKHWD 250
PNL+ +S+ NP CDC + +W+ +K + PLS C P + +
Sbjct: 356 TVESLPNLREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYRGQQVK 411
Query: 251 DVKAQEFA--CPPNVTIKE--SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSF 306
+V Q+ + C P ++ + + + G + + C +PEP I W+ + + +
Sbjct: 412 EVLIQDSSEQCLPMISHDTFPNHLNMDIGTTLFLDCRAMAEPEPEIYWVT--PIGNKITV 469
Query: 307 DLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRG 346
+ L ++ ++ + N+ D+G YTC A+N++G
Sbjct: 470 ETLSDKYK---LSSEGTLEIANIQIEDSGRYTCVAQNVQG 506
Score = 166 (63.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+ + L L N+IS +T + + NLQ +Y+ ++ I + + F L L+ + L+
Sbjct: 119 TQLTTLHLEENQISEMTDYCLQDLS--NLQELYINHNQISSISANAFSGLKNLLRLHLNS 176
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N++ + F L++L + NP+ + F L L+++ L + + +AL+
Sbjct: 177 NKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDIPGNALV 236
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L +LESL+ N+L + + PNLK L L+ NP
Sbjct: 237 GLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNP 274
Score = 152 (58.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 22 TDCPDTCRCK---W-----TLGKKSAL-CKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
++CP C C+ W T + + + C D T +P L SD QVL L +N I+
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKTVD 89
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
E + L NL + + + LT L + L +NQI+ + L+
Sbjct: 90 ELQQ---LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQ 146
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
LY+N N I+ + A F L L + L ++ + LE L + N + +
Sbjct: 147 ELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGI 206
Query: 193 SESVFFPTPNLKTLSLDG 210
+ F P NL++L L G
Sbjct: 207 LDMNFRPLSNLRSLVLAG 224
Score = 132 (51.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q + L+++ I + D + L L E+D S N + + +L L+L N I+E
Sbjct: 75 QVLLLQSNNIAKTV-DELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISE 133
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ L L+ + + H QI S+ +A L L L+LN N+LK + F TPNL
Sbjct: 134 MTDYCLQDLSNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNL 193
Query: 204 KTLSLDGNP 212
+ L + NP
Sbjct: 194 EILMIGENP 202
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 45/187 (24%), Positives = 86/187 (45%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++++L + N + + F+ + NL+ + L + ++ + L L + DN
Sbjct: 192 NLEILMIGENPVIGILDMNFRPLS--NLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDN 249
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC-QIHSVHKDALI 174
++ + Q LK L LN NPI +++ G F + LK + + + ++ SV + AL
Sbjct: 250 KLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALD 309
Query: 175 HLTALESLNLNGN-RLKHLSESVFFPTPNLKTLSLDGNPWCCDCH--LRSFRNWLLKSKL 231
+L L L N +L ++ F P L++L L+ N + S N L + +
Sbjct: 310 NLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPN-LREISI 368
Query: 232 YSHPLSC 238
+S+PL C
Sbjct: 369 HSNPLRC 375
Score = 39 (18.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 540 FATLPRRPRSKVIEPS--SLVRVGPK-YDNMGPRVTAGGASILSLPDATSTE 588
F L + P K+ E +++R+ +NMG V+ ++ +LP+ T E
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLE 318
>UNIPROTKB|F1NL15 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
Pfam:PF01463 GeneTree:ENSGT00700000104083 EMBL:AADN02035923
IPI:IPI00818500 Ensembl:ENSGALT00000041140 ArrayExpress:F1NL15
Uniprot:F1NL15
Length = 1094
Score = 203 (76.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/162 (30%), Positives = 81/162 (50%)
Query: 101 FKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIEL 160
FK L L +++LS+N+I + + TF G ++ L L N + + F L LKT+ L
Sbjct: 123 FKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLML 182
Query: 161 QHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ I ++ D L+++ L+L N + ++ F +L T++L N + C+CHL
Sbjct: 183 RSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLA 242
Query: 221 SFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFACPPN 262
WL K ++ S C +P L+ DV AQ+F C N
Sbjct: 243 WLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGN 284
Score = 189 (71.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 59/192 (30%), Positives = 88/192 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T+ C + T LPS L L LN+N IS L FK L N
Sbjct: 75 CPEKCRCEGTVVD----CSNQKLTRLPSHLPEYTTDLRLNDNDISVLEAIGLFKK--LPN 128
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I L N+ I+E+ TF + + E+ L++NQ+ +H F G LK L L N I+
Sbjct: 129 LRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSIS 188
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L I ++ A L +L ++NL N +
Sbjct: 189 CINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWL 248
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 249 RKKRIVSGNPRC 260
Score = 122 (48.0 bits), Expect = 0.00092, P = 0.00092
Identities = 45/178 (25%), Positives = 74/178 (41%)
Query: 90 NSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQF 149
N G+R + + K +T E+ L N + + + L ++ L+ N I+ L F
Sbjct: 310 NKGLRVMPKGIPKDVT---ELYLEGNHLTAVPKGLSAFR-HLTLIDLSNNSISVLANYTF 365
Query: 150 PKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+ L T+ L + ++ + A L +L L L+GN + + E F +L L+L
Sbjct: 366 SNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLALG 425
Query: 210 GNPWCCDCHLRSFRNWLLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFACPPNVTI 265
NP CDC+LR W+ Y P C+ P + + F C V I
Sbjct: 426 TNPLHCDCNLRWLSEWVKAG--YKEPGIARCSGPEAMVDRLLLTTPTHHFQCKEPVDI 481
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 174 (66.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 62/258 (24%), Positives = 113/258 (43%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+ ++VLDL+ N+I ++ L+ + L ++ I+ + +F+ L L E+ LS
Sbjct: 291 TSLEVLDLSYNQIQSFHISSWSHTP--KLKWLSLHSNRIQSLPSGSFRVLRQLEELILSA 348
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITE-LRAGQF---PKLPYLKTIELQHCQIHSVHK 170
N I LH+ +G L L L+ N + + G +P+L+++ + Q+ + K
Sbjct: 349 NSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIPK 408
Query: 171 DALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSK 230
A ALE L+L N + + F P LK L ++ + CDC + +W+ + K
Sbjct: 409 RAFERFPALEELDLTDNPIATIHPEAFEPL-ELKRLVMNSSSILCDCQISWLASWIYRLK 467
Query: 231 LYSHPL--SCTEPGMLQTKHWDDVKAQEFAC----PPNVTIKESMVIREA-GGNVTMSCY 283
L + C+ P L + + C P +++ + + G +C
Sbjct: 468 LDKSSIIAKCSYPPPLADLYVVAIDTANLTCHNDSPRAKIVRQPVEVSTLIGEKARFTCN 527
Query: 284 VYGDPEPTILWLL--NGQ 299
VYG +I W + NGQ
Sbjct: 528 VYGASPLSIEWRVMENGQ 545
Score = 166 (63.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 45/155 (29%), Positives = 80/155 (51%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ +DL+ N ISYL K + +N++++ L ++ I ++ D F LV + L+ N
Sbjct: 149 VRSVDLSRNLISYLPKPTTSA--KVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNH 206
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L+Q +F +L+ L L N I E+R F +LP L+ + L ++ +
Sbjct: 207 ITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYAC 266
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ LNL+ NR++ ++E F +L+ L L N
Sbjct: 267 EGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYN 301
Score = 147 (56.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 40/156 (25%), Positives = 84/156 (53%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++++L++ N+++ + + + + +G +L+++ L+++ I V + YL + VDLS N
Sbjct: 101 NLKILNIRKNRLARIPRGSHE-LG--HLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRN 157
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I++L + T ++ L L N IT++ F L T++L I ++++ +
Sbjct: 158 LISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSR 217
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L LESL+L N ++ + F P+L+ +SL N
Sbjct: 218 LRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARN 253
Score = 136 (52.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 52/170 (30%), Positives = 80/170 (47%)
Query: 46 FTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLT 105
F LPS +Q + L N + L F + L+ + L + ++ V LT
Sbjct: 239 FNQLPS-----LQNVSLARNDVYRLDDGMFYACE--GLKHLNLSTNRVQAVTEGWMFGLT 291
Query: 106 ILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
L +DLS NQI H ++ +LK L L+ N I L +G F L L+ + L I
Sbjct: 292 SLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILSANSI 351
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSE--SVFFPT--PNLKTLSLDGN 211
S+HK AL+ +++L L+L+ N L E +V + T P L++L N
Sbjct: 352 DSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNN 401
Score = 135 (52.6 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 46/152 (30%), Positives = 69/152 (45%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L N I+ L + +F L L+ + L + IREV F L L V L+ N +
Sbjct: 200 LKLARNHITTLNQFSFSR--LRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYR 257
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F + LK L L+ N + + G L L+ ++L + QI S H + H L
Sbjct: 258 LDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKL 317
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L+L+ NR++ L F L+ L L N
Sbjct: 318 KWLSLHSNRIQSLPSGSFRVLRQLEELILSAN 349
Score = 128 (50.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+I+ LDL +N I+ + + F S L + L + I +++ +F L L +DL+ N
Sbjct: 172 NIEKLDLASNSITDIGTDHFSSFN--TLVTLKLARNHITTLNQFSFSRLRKLESLDLTRN 229
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I + F L+ + L N + L G F LK + L ++ +V + +
Sbjct: 230 MIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFG 289
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
LT+LE L+L+ N+++ S + TP LK LSL N
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSN 325
Score = 123 (48.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 46/191 (24%), Positives = 89/191 (46%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T C C C +G C + + +P+T+ ++ ++L L++N+I + K K G
Sbjct: 23 TVCIGLCHC---VGNVVD-CSSLDLSEIPTTIPNNTRILLLSDNEIESIDKSRLK--GFY 76
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTF-LGNDRLKVLYLNGNP 140
LQ + + N+ IR + + F L L +++ N++A + + + LG+ L+ L L N
Sbjct: 77 FLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARIPRGSHELGH--LEKLDLRSNL 134
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
I+ + + + L +++++L I + K +E L+L N + + F
Sbjct: 135 ISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSF 194
Query: 201 PNLKTLSLDGN 211
L TL L N
Sbjct: 195 NTLVTLKLARN 205
Score = 115 (45.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/153 (25%), Positives = 73/153 (47%)
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
N + + L ++ I + + K L +D+S+N I + + F LK+L + N +
Sbjct: 53 NTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRL 112
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ G +L +L+ ++L+ I +V + L +L A+ S++L+ N + +L +
Sbjct: 113 ARIPRGSH-ELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKV 171
Query: 202 NLKTLSLDGNPWCCDC---HLRSFRNWLLKSKL 231
N++ L L N D H SF N L+ KL
Sbjct: 172 NIEKLDLASNS-ITDIGTDHFSSF-NTLVTLKL 202
Score = 85 (35.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 29/103 (28%), Positives = 37/103 (35%)
Query: 252 VKAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEE 311
VK Q + P E M + G C G P P I W Q+ F E
Sbjct: 608 VKLQVYQAPKFTYTPEDMPLL-VGQTAKFLCAATGTPRPEIKWAFE-QI----PFPAAEA 661
Query: 312 EEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISL 354
+ I + NVT D G YTC+A N+ G +L
Sbjct: 662 RRL-YVTPNDDHIYIMNVTKEDQGAYTCHATNVAGQTQASANL 703
Score = 44 (20.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 324 ITLFNVTDLDAGEYTC 339
+TL T D+GEY+C
Sbjct: 768 LTLTQTTFSDSGEYSC 783
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/226 (30%), Positives = 96/226 (42%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L L+ NPI + L L+ I+L Q+ +V A L L LN++GN L
Sbjct: 282 LRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLT 341
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL LD NP CDC L FR W L P +C+ P +Q K
Sbjct: 342 TLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNK-QQP-TCSTPEFVQGKE 399
Query: 249 WDD----VKAQEFACPPNVTIKE---SMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVL 301
+ D + F C I++ + + G V C GDP P I+WL + L
Sbjct: 400 FKDFPDVLLPNYFTCR-RARIRDRKPQQIFVDEGHTVHFVCRADGDPPPAIMWLSPRKHL 458
Query: 302 HNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
++ + D E + + D G Y C A N GN
Sbjct: 459 ISTKTNGRLTVFPDGTLE----VRYAQIQD--NGTYLCIASNAGGN 498
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/214 (25%), Positives = 96/214 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L+LN N IS + AF + L NL+ + L+++ ++ + F L+ L ++D+S+N+
Sbjct: 90 LEELELNENIISAIEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 147
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + L+ C + S+ +AL HL
Sbjct: 148 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 207
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPL 236
L L L + + + F LK L + P+ L S +H
Sbjct: 208 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITH-C 266
Query: 237 SCTEPGMLQTKHWDDVKAQEFACPPNVTIKESMV 270
+ T + +H ++ + P VTI+ SM+
Sbjct: 267 NLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSML 300
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LG+ S T CP C C + +++ LC F +P + ++ + LDL N+I L +
Sbjct: 24 LGSILSGSATGCPPRCEC--SAQERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIKTLNQ 81
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
+ F + +L+ + L + I + F L L + L N++ + F G L
Sbjct: 82 DEFANYP--HLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLT 139
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNL 184
L ++ N I L F L LK++E+ + + A L +LE L L
Sbjct: 140 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 191
>UNIPROTKB|G3N2S4 [details] [associations]
symbol:LRRC26 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015459 "potassium channel regulator activity"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0008076 GO:GO:0015459 OMA:DAAFSHC
GeneTree:ENSGT00700000104083 EMBL:DAAA02032413
Ensembl:ENSBTAT00000065953 Uniprot:G3N2S4
Length = 262
Score = 185 (70.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 52/170 (30%), Positives = 74/170 (43%)
Query: 79 GLLNLQRIYLKNSG-IREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLN 137
GL R+ L N + + F L+ +DL +N + W+H F G L+ L L+
Sbjct: 4 GLNRRVRVLLLNHNRVHALPPGAFVDAGALLRLDLRENGLRWVHARAFWGLGALEQLDLS 63
Query: 138 GNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVF 197
N + L G F L L+ + L ++ + L L L +L+L N L L+ +
Sbjct: 64 ANQLEALLPGTFAPLRALRALSLAENRLARLEPAVLGALPLLRALSLQDNDLPALASGLL 123
Query: 198 FPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS---HPLSCTEPGML 244
P L TL L GNPW C C LR WL ++ L C PG L
Sbjct: 124 AGLPALNTLRLRGNPWTCGCALRPLCAWLRGHPRHAPEAETLLCVSPGRL 173
Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 49 LPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILV 108
+P L+ ++VL LN+N++ L AF G L R+ L+ +G+R VH F L L
Sbjct: 1 VPGGLNRRVRVLLLNHNRVHALPPGAFVDAGAL--LRLDLRENGLRWVHARAFWGLGALE 58
Query: 109 EVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSV 168
++DLS NQ+ L TF L+ L L N + L LP L+ + LQ + ++
Sbjct: 59 QLDLSANQLEALLPGTFAPLRALRALSLAENRLARLEPAVLGALPLLRALSLQDNDLPAL 118
Query: 169 HKDALIHLTALESLNLNGN 187
L L AL +L L GN
Sbjct: 119 ASGLLAGLPALNTLRLRGN 137
>MGI|MGI:2442512 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:2442512 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH466593 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414 KO:K16356
OMA:WAVGEEE eggNOG:NOG239228 EMBL:DQ078787 EMBL:AK040916
EMBL:BC066999 EMBL:BC094593 IPI:IPI00222949 RefSeq:NP_780687.1
UniGene:Mm.23157 ProteinModelPortal:Q8BLY3 SMR:Q8BLY3 STRING:Q8BLY3
PhosphoSite:Q8BLY3 PaxDb:Q8BLY3 PRIDE:Q8BLY3
Ensembl:ENSMUST00000046351 GeneID:233067 KEGG:mmu:233067
UCSC:uc009gee.1 InParanoid:Q505E2 OrthoDB:EOG43TZV6 NextBio:381527
Bgee:Q8BLY3 Genevestigator:Q8BLY3 GermOnline:ENSMUSG00000036957
Uniprot:Q8BLY3
Length = 626
Score = 205 (77.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 88/324 (27%), Positives = 137/324 (42%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I ++ AF L L+ ++L + + + + L L + LS+NQ+A
Sbjct: 88 LSLSRNTIRHVAAGAFAD--LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAA 145
Query: 120 LHQDTFLG-NDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
L + L+ L L+ N + +L +L + T+ L H + SV A L
Sbjct: 146 LAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHK 205
Query: 179 LESLNLNGNRLKHLS-ESVFFPTPNLK----------TLSLDGNPWCCDCHLRSFRNWLL 227
L L++ NRL + + +F P L L+ GNP C+C L WL
Sbjct: 206 LARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLAFGGNPLHCNCELV----WLR 261
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYVYG 286
+ +C P L +++ V +EF C PP VT + + AG + C G
Sbjct: 262 RLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVG 321
Query: 287 DPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIR 345
DPEP + W+ G++L NSS A F ++ L D G +TC A N
Sbjct: 322 DPEPRVRWVSPQGRLLGNSS-------RARA-FPNG-TLELLVTEPEDGGTFTCIAANAA 372
Query: 346 GNASGEISLDL---PEINLATTLS 366
G A+ + L + P LA + S
Sbjct: 373 GEATAAVELTVGPPPPPQLANSTS 396
Score = 142 (55.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 51/190 (26%), Positives = 81/190 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GLLN 82
CP CRC+ S LC A +P +LD L L +N I+ + + ++ GLL+
Sbjct: 28 CPRRCRCQTQSMPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIAAVRRRDLANMTGLLH 87
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L L + IR V F L L + L N++ L + G L+ L L+ N +
Sbjct: 88 LS---LSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLA 144
Query: 143 ELRAGQFPKLPY-LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
L AG L+ ++L + + + +AL L + +L L+ N L + F
Sbjct: 145 ALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLH 204
Query: 202 NLKTLSLDGN 211
L L + N
Sbjct: 205 KLARLDMTSN 214
Score = 39 (18.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 15/63 (23%), Positives = 23/63 (36%)
Query: 507 EPPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAYFATLPRRPRSKVIEPSSLVRVGPKYDN 566
+PPG P + + GP P+ A P PR+ + GP ++
Sbjct: 568 QPPGKAKATAP--VSSVCSQTNGALGPV--PSAPAPEPAAPRAHTVVQLDCEPWGPSHEP 623
Query: 567 MGP 569
GP
Sbjct: 624 AGP 626
>RGD|1305567 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1305567 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH473979 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414
eggNOG:NOG323197 KO:K16356 OMA:WAVGEEE OrthoDB:EOG43TZV6
EMBL:BC158862 IPI:IPI00367086 RefSeq:NP_001100972.1
UniGene:Rn.50030 ProteinModelPortal:B0BNK7
Ensembl:ENSRNOT00000028275 GeneID:308495 KEGG:rno:308495
UCSC:RGD:1305567 NextBio:659014 Genevestigator:B0BNK7
Uniprot:B0BNK7
Length = 626
Score = 205 (77.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 88/324 (27%), Positives = 137/324 (42%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+ N I ++ AF L L+ ++L + + + + L L + LS+NQ+A
Sbjct: 88 LSLSRNTIRHVAAGAFAD--LRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAA 145
Query: 120 LHQDTFLG-NDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
L + L+ L L+ N + +L +L + T+ L H + SV A L
Sbjct: 146 LAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHK 205
Query: 179 LESLNLNGNRLKHLS-ESVFFPTPNLK----------TLSLDGNPWCCDCHLRSFRNWLL 227
L L++ NRL + + +F P L L+ GNP C+C L WL
Sbjct: 206 LARLDMTSNRLTTIPPDPLFSRLPLLARPRGSPASALVLAFGGNPLHCNCELV----WLR 261
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PPNVTIKESMVIREAGGNVTMSCYVYG 286
+ +C P L +++ V +EF C PP VT + + AG + C G
Sbjct: 262 RLAREDDLEACASPPALGGRYFWAVGEEEFVCEPPVVTHRSPPLAVPAGRPAALRCRAVG 321
Query: 287 DPEPTILWLL-NGQVLHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIR 345
DPEP + W+ G++L NSS A F ++ L D G +TC A N
Sbjct: 322 DPEPRVRWVSPQGRLLGNSS-------RARA-FPNG-TLELLVTEPEDGGTFTCIAANAA 372
Query: 346 GNASGEISLDL---PEINLATTLS 366
G A+ + L + P LA + S
Sbjct: 373 GEATAAVELTVGPPPPPQLANSTS 396
Score = 142 (55.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 54/198 (27%), Positives = 84/198 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAF 75
T SP CP CRC+ S LC A +P +LD L L +N I+ + +
Sbjct: 24 TSSP----CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIAAVRRRDL 79
Query: 76 KSI-GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVL 134
++ GLL+L L + IR V F L L + L N++ L + G L+ L
Sbjct: 80 ANMTGLLHLS---LSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHL 136
Query: 135 YLNGNPITELRAGQFPKLPY-LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLS 193
L+ N + L AG L+ ++L + + + +AL L + +L L+ N L +
Sbjct: 137 ILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVP 196
Query: 194 ESVFFPTPNLKTLSLDGN 211
F L L + N
Sbjct: 197 AGAFSRLHKLARLDMTSN 214
Score = 39 (18.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 15/63 (23%), Positives = 23/63 (36%)
Query: 507 EPPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAYFATLPRRPRSKVIEPSSLVRVGPKYDN 566
+PPG P + + GP P+ A P PR+ + GP ++
Sbjct: 568 QPPGKAKATAP--VSSVCSQTNGALGPV--PSAPAPEPAAPRAHTVVQLDCEPWGPSHEP 623
Query: 567 MGP 569
GP
Sbjct: 624 AGP 626
>MGI|MGI:2444885 [details] [associations]
symbol:Lrit2 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2444885 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HSSP:P07359 GeneTree:ENSGT00700000104028 CTD:340745
HOGENOM:HOG000082676 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
eggNOG:NOG331103 EMBL:BC057628 IPI:IPI00277844 RefSeq:NP_775594.1
UniGene:Mm.134302 ProteinModelPortal:Q6PFC5 SMR:Q6PFC5 PRIDE:Q6PFC5
Ensembl:ENSMUST00000057176 GeneID:239038 KEGG:mmu:239038
UCSC:uc007tbs.1 InParanoid:Q6PFC5 OMA:HIGPGIN NextBio:383967
Bgee:Q6PFC5 Genevestigator:Q6PFC5 Uniprot:Q6PFC5
Length = 549
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 78/333 (23%), Positives = 132/333 (39%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
C C C +S C + +P +++ + + N+ + L++ F ++ +L
Sbjct: 24 CLPECTCSEESFGRSLQCMSMSLGKIPDNFPEELKQVRIENSPLFELSQGFFTNMS--SL 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ ++L + + +H + L L E+ L N++ + F L+VL L N I
Sbjct: 82 EYLWLNFNNVTVIHLGALEDLPELRELRLEGNKLRSVPWTAFRATPLLRVLDLKHNRIDS 141
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ L L +++ ++ V K ++ A + G + LS V
Sbjct: 142 VPELALQFLTNLIYLDISSNRLTVVSKGVFLNWPAYQKRQQLGCGAEFLSNMV------- 194
Query: 204 KTLSLDGNPWCCDCHLRSFRNWLLKSK-----LYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
LSL NPW CDC LR ++ KS L + L C P +K + E
Sbjct: 195 --LSLHNNPWLCDCRLRGLAQFV-KSVGPPFILVNSYLVCQGP---VSKAGQLLHETELG 248
Query: 259 -C-PPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLNGQVLHNSSFDLLEEEEGDA 316
C P ++ V + G NVT+ C+ P PTI W FD+L +
Sbjct: 249 VCMKPTISTPSVNVTIQVGKNVTLQCFAQASPSPTIAWKYPLSTWRE--FDVLASPIAEG 306
Query: 317 LFEKSVSITLFNVTDLDAGEYTCYAENIRGNAS 349
+ + I + +D G YTC A N G +S
Sbjct: 307 IILSQLVIPAAQL--VDGGNYTCMAFNSIGRSS 337
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 57/188 (30%), Positives = 85/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C+ A+P SD Q+LDL N + + AF +G +L
Sbjct: 396 CPRACVC--VPESRHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFPGLG--HL 451
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
++L++ GI E+ L L+ + LSDNQ+A L G RL LYL N +
Sbjct: 452 VSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQ 511
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ LP L ++ LQ + + L AL + L+GNR+ +S P L
Sbjct: 512 VPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPAREL 571
Query: 204 KTLSLDGN 211
+ L LD N
Sbjct: 572 EKLHLDRN 579
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 55/188 (29%), Positives = 86/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + ++ C+ N T +P + Q LDL N + + AF+ G+ +L
Sbjct: 33 CPQACICDNS--RRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQ--GVPHL 88
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L++ + V F+ L L+ ++L+ N + L Q+ G L+ L L GN + E
Sbjct: 89 THLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEE 148
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
LR G F L L T+ L H + + A L + L L+ N L L+ P L
Sbjct: 149 LRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPAL 208
Query: 204 KTLSLDGN 211
+ LSL N
Sbjct: 209 RRLSLHHN 216
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 55/212 (25%), Positives = 93/212 (43%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+ L+L +N + YL AF+ GLL ++ + L ++ + + + L L + L N+
Sbjct: 160 LATLNLAHNALVYLPAMAFQ--GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNE 217
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L L L L NP+T LP L+ + L + ++ A H
Sbjct: 218 LQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHC 277
Query: 177 TALESLNLNGNRLKHLSESVFFPTPN-LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
L +L+L GN+L L P L+ L L GNP C C R WL ++++ S
Sbjct: 278 PRLHTLDLRGNQLDTLPP---LQGPGQLRRLRLQGNPLWCGCQARPLLEWLARARVRSDG 334
Query: 236 LSCTEPGMLQTKHWDDVKAQEFACPPNVTIKE 267
+C P L+ + D ++ + CP + +E
Sbjct: 335 -ACQGPRRLRGEALDALRPWDLRCPGDAAQEE 365
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L+L +N + L +EA +G +L+R+ L+ + + E+ TF L L ++L+ N +
Sbjct: 114 LLNLASNHLRELPQEALDGLG--SLRRLELEGNALEELRPGTFGALGALATLNLAHNALV 171
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+L F G R++ L L+ N ++ L LP L+ + L H ++ ++ L
Sbjct: 172 YLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARG 231
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDG 210
L L L N L + E P L+ L LDG
Sbjct: 232 LARLELGHNPLTYAGEEDGLALPGLRELLLDG 263
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/154 (31%), Positives = 76/154 (49%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N+++ L+ A + G L +YL+ + +V + L L + L DN +
Sbjct: 478 LYLSDNQLAGLSAAALE--GAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDR 535
Query: 120 LHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
L LG R L+ +YL+GN ITE+ G L+ + L Q+ V AL L A
Sbjct: 536 LAPGD-LGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPA 594
Query: 179 LESLNLNGNRLKHLSESVFFPTP-NLKTLSLDGN 211
L L L+GN L+ L + F P +L+ L L+ +
Sbjct: 595 LLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSS 628
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDL + ++ + + AF+ +G L L + L ++ +RE+ ++ L L ++L N +
Sbjct: 91 LDLRHCEVELVAEGAFRGLGRLLL--LNLASNHLRELPQEALDGLGSLRRLELEGNALEE 148
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L TF L L L N + L A F L ++ + L H + + +AL L AL
Sbjct: 149 LRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPAL 208
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L+L+ N L+ L V L L L NP
Sbjct: 209 RRLSLHHNELQALPGPVLSQARGLARLELGHNP 241
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 58/202 (28%), Positives = 81/202 (40%)
Query: 44 ANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQR-IYLKNSGIREVHRDTFK 102
A ALPS L L +N + L A +G R +YL + I EV
Sbjct: 515 AALRALPSLFS-----LHLQDNAVDRL---APGDLGRTRALRWVYLSGNRITEVSLGALG 566
Query: 103 YLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQF-PKLPYLKTIELQ 161
L ++ L NQ+ + G L L L+GNP+ LR G F P L+ + L
Sbjct: 567 PARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLN 626
Query: 162 HCQIHSVHKDALIHL-TALESLNLNGNRLKHLSESVFFPT-PNLKTLSLDGNPWCCDCHL 219
+ + A L L+SL+L N+L+ L P+ L+ + L NP+ CDC L
Sbjct: 627 SSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPA---LPSLSQLELIDLSSNPFHCDCQL 683
Query: 220 RSFRNWLLKSKLYSHPLSCTEP 241
WL L T P
Sbjct: 684 LPLHRWLTGLNLRVGATCATPP 705
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 54/172 (31%), Positives = 86/172 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q LDL++N + + EA L +L+ + L ++ + + + L L + L+ N+
Sbjct: 55 LQDLDLSDNGLQAVLTEA----ALPSLKELLLSHNALEAL--PALQGLPALTRLALAHNK 108
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L F +L+ L L GN + L F L LK ++L + + + L L
Sbjct: 109 LQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDL 168
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKT-LSLDGNPWCCDCHLRSFRNWLL 227
LE+L L+GNRL+ L S FFP +L + L NPW CDC L R+W+L
Sbjct: 169 VTLETLWLSGNRLRALP-SGFFPEGHLFAYVFLTENPWHCDCDLVYLRSWIL 219
Score = 146 (56.5 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 53/190 (27%), Positives = 91/190 (47%)
Query: 24 CP--DTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
CP D C C T+ C + +A+P+ L + +L LN N++ ++ AF+ + L
Sbjct: 2 CPSRDGCSCP-TVN-----CTGRDLSAVPAGLPENTGILLLNANRLLSVSTAAFQKLAAL 55
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
Q + L ++G++ V + L L E+ LS N + L G L L L N +
Sbjct: 56 --QDLDLSDNGLQAVLTEAA--LPSLKELLLSHNALEAL--PALQGLPALTRLALAHNKL 109
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
L F +P L+ ++L+ + ++ +DA + L L+ L+L+ N L+ L +
Sbjct: 110 QALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLV 169
Query: 202 NLKTLSLDGN 211
L+TL L GN
Sbjct: 170 TLETLWLSGN 179
>RGD|628607 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:628607
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG42JNR2
EMBL:AB028461 IPI:IPI00215326 RefSeq:NP_647547.2 UniGene:Rn.20309
ProteinModelPortal:Q9JMH2 STRING:Q9JMH2 PhosphoSite:Q9JMH2
PRIDE:Q9JMH2 Ensembl:ENSRNOT00000017773 GeneID:246214
KEGG:rno:246214 UCSC:RGD:628607 InParanoid:Q9JMH2 NextBio:623495
Genevestigator:Q9JMH2 GermOnline:ENSRNOG00000012790 Uniprot:Q9JMH2
Length = 623
Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 75/297 (25%), Positives = 129/297 (43%)
Query: 85 RIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITEL 144
++ L+ + IR V +TF+ L+ L ++ L N ++ L G RL+ L L GN +
Sbjct: 63 KLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLVTF 122
Query: 145 RAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLK 204
P L+ ++LQ ++ ++ +A+ L L L+L+ N+L L E + +LK
Sbjct: 123 PWAALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDTWAHLK 182
Query: 205 T------------LSLDGNPWCCDCHLRSFRN----WLLKSKLYSHPLSCTEPGMLQTKH 248
T L L NPW CDC L + W L C P L
Sbjct: 183 TGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAGVA 242
Query: 249 WDDVKAQEFACP-PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL-LNGQVLHNSSF 306
+ ++ ++ C P + + +I G V + C G P P + W NG+ L+ +
Sbjct: 243 FSQLELRK--CQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGT-- 298
Query: 307 DLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLAT 363
+ +E D + + + ++ D+G+Y C A+N G + ISL + E +T
Sbjct: 299 -VHQEVSSDGSSWTLLDLPVVSL--FDSGDYICQAKNFLGASETLISLIVTEPQTST 352
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 197 (74.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 47/151 (31%), Positives = 79/151 (52%)
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL L+R++L+++ I + + L+ L+E+DL+ NQ+ L + F G +L+ L L+
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSN 467
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N +T L L ++L H ++ + + L L LNL N L+ F
Sbjct: 468 NQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQ-----TFV 522
Query: 199 PTPNLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
P P L+ L LD NPW C C L++ R++ L++
Sbjct: 523 PQPGLERLWLDANPWDCSCPLKALRDFALQN 553
Score = 187 (70.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 53/156 (33%), Positives = 80/156 (51%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ LDL+ N + + F I L LQ++YL + I V F + L +DLS N
Sbjct: 219 ELRELDLSRNALRSVKANVF--IHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHN 276
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
++A L +DTF G L VL L N IT LR F L +L+ ++L H +I + +
Sbjct: 277 RVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEG 336
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L LE L LN N++ + FF N+ ++L GN
Sbjct: 337 LGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGN 372
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 49/152 (32%), Positives = 76/152 (50%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDL++N+++ L ++ F GLL L + L ++ I + TFK L L E+ L N+I
Sbjct: 271 LDLSHNRVAGLLEDTFP--GLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + TF G +L+VL LN N I E++ G F L + + L + S+ + L L
Sbjct: 329 LGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRL 388
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
SL+L + L + F L+ L L N
Sbjct: 389 HSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Score = 150 (57.9 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 50/170 (29%), Positives = 76/170 (44%)
Query: 45 NFTALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
+ LP T+ ++ L L NK++YL +G L+ + L + +R V + F
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLG--ELRELDLSRNALRSVKANVF 238
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
+L L ++ L N I + FLG L+ L L+ N + L FP L L + L
Sbjct: 239 IHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLA 298
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
H I S+ L LE L L NR++ L E F L+ L+L+ N
Sbjct: 299 HNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDN 348
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L L +N+I L ++ F+ +G L + + L ++ I EV F L + ++LS N
Sbjct: 316 LEELQLGHNRIRQLGEKTFEGLGQLEV--LTLNDNQIHEVKVGAFFGLFNVAVMNLSGNC 373
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L + F G RL L+L + + +R F L L+ + L+ I S+ + +L L
Sbjct: 374 LRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 433
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L L+L N+L HL +F L+ L L N
Sbjct: 434 SELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNN 468
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 50/200 (25%), Positives = 79/200 (39%)
Query: 14 GTTGSPDWTDCPDTCRCKWT--LGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLT 71
G + + CP TC C + + S C N T LP + + L L+ N +S +
Sbjct: 31 GASADAEGPQCPVTCTCSYDDYTDELSVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIP 90
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
AF+++ L+ + L+ S +R + L L + L N + L F L
Sbjct: 91 SAAFQNLSSLDF--LNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSL 148
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
L L N + L G F L +L + L + + L L L L GN+L +
Sbjct: 149 ASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTY 208
Query: 192 LSESVFFPTPNLKTLSLDGN 211
L ++ L+ L L N
Sbjct: 209 LQPALLCGLGELRELDLSRN 228
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 39 ALCKDAN-FTALPSTLDSDIQVLDLNNNKISYLTK-EAFKSIGLLNLQRIYLKNSGIREV 96
AL D N +++PS ++ LD N + S+L E +GL NL ++L+ + +R +
Sbjct: 78 ALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSL 137
Query: 97 HRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLK 156
F++ L + L +N + L + F G L L L N + L F L L
Sbjct: 138 AAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLH 197
Query: 157 TIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L ++ + L L L L+L+ N L+ + +VF P L+ L LD N
Sbjct: 198 ELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRN 252
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 49/153 (32%), Positives = 73/153 (47%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L+ N I+ + AF +G+ L+ + L ++ + + DTF L L + L+ N
Sbjct: 244 LQKLYLDRNLITAVAPRAF--LGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNA 301
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L TF L+ L L N I +L F L L+ + L QIH V A L
Sbjct: 302 ITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGL 361
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
+ +NL+GN L+ L E VF L +L L+
Sbjct: 362 FNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLE 394
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 43/156 (27%), Positives = 78/156 (50%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ V++L+ N + L + F+ +G L ++L++S + + TF L+ L + L DN
Sbjct: 363 NVAVMNLSGNCLRSLPEHVFQGLG--RLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I+ + + + G L L L N +T L F L L+ + L + Q+ + +D L
Sbjct: 421 SISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGP 480
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+L+ NRL+ +E +F L+ L+L N
Sbjct: 481 LQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNN 516
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 55/207 (26%), Positives = 88/207 (42%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++VL LN+N+I + AF GL N+ + L + +R + F+ L L + L +
Sbjct: 340 LEVLTLNDNQIHEVKVGAF--FGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSC 397
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ + TF G L+ L+L N I+ + L L ++L Q+ + + L
Sbjct: 398 LGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGL 457
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCH-LRSFRNWLLKSKLYSHP 235
LE L L+ N+L LSE V P L L N L S L L ++
Sbjct: 458 GQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNS 517
Query: 236 LSC--TEPGMLQTKHWDDVKAQEFACP 260
L +PG+ + W D + +CP
Sbjct: 518 LQTFVPQPGL--ERLWLDANPWDCSCP 542
>UNIPROTKB|A4IFA6 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9913 "Bos taurus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W
GeneTree:ENSGT00700000104028 EMBL:BC134481 IPI:IPI00685291
RefSeq:NP_001074198.1 UniGene:Bt.1899 ProteinModelPortal:A4IFA6
PRIDE:A4IFA6 Ensembl:ENSBTAT00000007913 GeneID:515018
KEGG:bta:515018 CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853
InParanoid:A4IFA6 OMA:HGKAVEG NextBio:20871625 Uniprot:A4IFA6
Length = 428
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 90/353 (25%), Positives = 153/353 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C C G A C + A+PS +++ L L+ N++ L AF+ + L
Sbjct: 19 CPEPCECGEKYGFHIADCAYRDLQAVPSGFPANVTTLSLSANQLPSLPGGAFREVP--RL 76
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
Q ++L ++ IR V L+ L +DLS N I+ L++L ++ N +T
Sbjct: 77 QSLWLAHNEIRSVAAGALASLSQLKSLDLSHNLISDFAWSDLHSLSALQLLKMDSNELTF 136
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ F L L++++L H ++H++ + LTAL L +N N V+F T L
Sbjct: 137 IPRDAFRSLRALRSLQLNHNRLHTLAEGTFAPLTALSHLQINDNPFDCTCGIVWFKTWAL 196
Query: 204 KT-LSL--DGNPWCCDCH-LRSFR-NWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFA 258
T +S+ N C H L+ R N LL PL C+ P + T +Q+ A
Sbjct: 197 TTAVSIPEQDNITCTSPHVLKGTRLNRLL-------PLPCSAPSVQLTYQ----PSQDGA 245
Query: 259 CPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLLN--GQVLHNSSFDLLEEEEGDA 316
++ V+ + C V G P P + W + G + +S ++ +G A
Sbjct: 246 -----ELRPGFVL-------ALHCDVDGQPAPQLHWHIQTPGGTVEITSPNV--GADGRA 291
Query: 317 L-----------FEKSV--SITLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
L F+ S+ + + L+ G Y+C A N G+A +++ L
Sbjct: 292 LPGVLAASSRPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVAL 344
>MGI|MGI:2653612 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO;ISS] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007413 "axonal fasciculation" evidence=ISO;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042552 "myelination" evidence=ISS] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO;ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2653612 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042552 GO:GO:0050772 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57463 eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237008
EMBL:AB167509 EMBL:AK035960 EMBL:AK173118 EMBL:AL671854
EMBL:BC010598 EMBL:BC022907 IPI:IPI00122248 IPI:IPI00608009
RefSeq:NP_001004293.1 RefSeq:NP_666249.2 UniGene:Mm.275752 PDB:2XOT
PDBsum:2XOT ProteinModelPortal:Q80ZD8 SMR:Q80ZD8 STRING:Q80ZD8
PhosphoSite:Q80ZD8 PRIDE:Q80ZD8 Ensembl:ENSMUST00000050909
Ensembl:ENSMUST00000106656 Ensembl:ENSMUST00000106659 GeneID:229715
KEGG:mmu:229715 GeneTree:ENSGT00530000063545 InParanoid:Q80ZD8
NextBio:379639 Bgee:Q80ZD8 CleanEx:MM_AMIGO1 Genevestigator:Q80ZD8
GermOnline:ENSMUSG00000050947 Uniprot:Q80ZD8
Length = 492
Score = 195 (73.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 98/368 (26%), Positives = 150/368 (40%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C +P +L S +LDL++N +S L E + L NL
Sbjct: 34 CPANCLCASNI----LSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAE-WTPTRLTNL 88
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L ++ + + + F + L +DLS N + L + F L+VL L N I
Sbjct: 89 HSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVV 148
Query: 144 LRAGQFPKLPYLKTIELQHCQIH----SVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
+ F + L+ + L QI + KD L L L+L+ N+LK L +
Sbjct: 149 VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGN-KLPKLMLLDLSSNKLKKLPLTDLQK 207
Query: 200 TPN-LKT-LSLDGNPWCCDCHL-RSFRNWL---LKSKL-YSHPLSCTEPGMLQTKHWDDV 252
P +K L L NP CDC L + F +W L S + + L C + +K ++
Sbjct: 208 LPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYC-----MHSKKLHNI 262
Query: 253 KAQEFA-CPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL--NGQVLHNSSFDLL 309
+ +F C KES G +T+ C T +W+ N QVL S +
Sbjct: 263 FSLDFFNCSE---YKESAWEAHLGDTLTIRCDTK-QQGMTKVWVSPSNEQVLSQGSNGSV 318
Query: 310 EEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTD 369
GD LF K V + D G YTCYA N + + L + L +
Sbjct: 319 SVRNGD-LFFKKVQVE-------DGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLN 370
Query: 370 SWYMLVLG 377
+ Y ++G
Sbjct: 371 TAYTTLVG 378
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 206 (77.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 67/243 (27%), Positives = 110/243 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C + C C+ G + C++ +L + L L+ N ++ L F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++L ++ I+++ F L L + L++N++ L DTFLG + L+ L ++ N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE-SVFFPT 200
+ + F KL L+ + L + S+ + L L L+L GNRLK L +
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHM 224
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS---CTEPGMLQTKHWDDVKAQEF 257
+ L L+ NPW C C L S ++WL S YS + C P L + D+V QE
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWL-DSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
Query: 258 ACP 260
CP
Sbjct: 284 -CP 285
Score = 182 (69.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKK--SALCKDANFTALPSTLDSDI--QVLDLNNNKISYLT 71
T SP +CP C C + + C++ ++ + + L N I+ +
Sbjct: 366 TKSPVPLECPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVR 425
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F L+L ++L N+ I + F LT L + L+ N+I L + F G L
Sbjct: 426 RSDFLEATGLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSL 483
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
+ L+L N I E+++G F +P L+ + L + + ++ LT L LNL N
Sbjct: 484 QYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTS 542
Query: 192 LSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKH 248
L S V +L + L NPW C C + + W+ LK + + C P
Sbjct: 543 LPVSGVLDQLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETD 602
Query: 249 WDDVKAQEFACP 260
+K+ E CP
Sbjct: 603 MRSIKS-ELLCP 613
Score = 41 (19.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 508 PPGSDPPKYPDLIDMPHRSVSVGTGPGTNPAY-FATLPRRPRSKVIEP 554
PP PP P L P + +PAY +T+ PR ++ P
Sbjct: 802 PPQPQPPPPPQLQLQPGEEERRESHHLRSPAYSVSTI--EPREDLLSP 847
>UNIPROTKB|Q8IWK6 [details] [associations]
symbol:GPR125 "Probable G-protein coupled receptor 125"
species:9606 "Homo sapiens" [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] InterPro:IPR001611 InterPro:IPR000203
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR007110
InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825 Pfam:PF02793
PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00303
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897
GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG307919 HOVERGEN:HBG051777
HOGENOM:HOG000112767 EMBL:AY181243 EMBL:AY358306 EMBL:AC093735
EMBL:AC093814 EMBL:BC026009 EMBL:BC035645 IPI:IPI00452590
IPI:IPI00452591 IPI:IPI00452592 IPI:IPI00452593 RefSeq:NP_660333.2
UniGene:Hs.99195 ProteinModelPortal:Q8IWK6 SMR:Q8IWK6 STRING:Q8IWK6
MEROPS:S63.021 PhosphoSite:Q8IWK6 DMDM:50400542 PaxDb:Q8IWK6
PRIDE:Q8IWK6 DNASU:166647 Ensembl:ENST00000334304
Ensembl:ENST00000502482 Ensembl:ENST00000508133 GeneID:166647
KEGG:hsa:166647 UCSC:uc003gqm.1 UCSC:uc003gqn.1 UCSC:uc003gqo.3
UCSC:uc010ieo.1 CTD:166647 GeneCards:GC04M022346 HGNC:HGNC:13839
HPA:HPA008904 MIM:612303 neXtProt:NX_Q8IWK6 PharmGKB:PA134919579
InParanoid:Q8IWK6 KO:K08462 OMA:HHIPVNV OrthoDB:EOG42820R
ChiTaRS:GPR125 GenomeRNAi:166647 NextBio:88603 ArrayExpress:Q8IWK6
Bgee:Q8IWK6 CleanEx:HS_GPR125 Genevestigator:Q8IWK6
GermOnline:ENSG00000152990 Uniprot:Q8IWK6
Length = 1321
Score = 212 (79.7 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 66/258 (25%), Positives = 117/258 (45%)
Query: 108 VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHS 167
V + LS+N+I+ L +F G L+ L L N I+ + G F L LK ++L + +I
Sbjct: 84 VTLILSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGC 143
Query: 168 VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
++ D LT L LNL+GN LS+ F +L++L CDC++ W+
Sbjct: 144 LNADIFRGLTNLVRLNLSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVK 203
Query: 228 KSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC-PP------NVTIKESMVIREAGGNVTM 280
+ + C P LQ + VK + C PP +T V+ E G ++
Sbjct: 204 EKNITVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYMTPSHRQVVFE-GDSLPF 262
Query: 281 SCYV-YGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV---SITLFNVTDLDAGE 336
C Y D + +LW +G+++ + E+ + + S+ ++T+ N+ G
Sbjct: 263 QCMASYIDQDMQVLWYQDGRIVETDESQGIFVEK-NMIHNCSLIASALTISNIQAGSTGN 321
Query: 337 YTCYAENIRGNASGEISL 354
+ C+ + RGN + + +
Sbjct: 322 WGCHVQTKRGNNTRTVDI 339
Score = 152 (58.6 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 41/112 (36%), Positives = 61/112 (54%)
Query: 50 PSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVE 109
P TL + L L+NNKIS L +F + LL +R+ L+N+ I + F L+ L
Sbjct: 76 PDTLPNRTVTLILSNNKISELKNGSFSGLSLL--ERLDLRNNLISSIDPGAFWGLSSLKR 133
Query: 110 VDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
+DL++N+I L+ D F G L L L+GN + L G F L L+++E Q
Sbjct: 134 LDLTNNRIGCLNADIFRGLTNLVRLNLSGNLFSSLSQGTFDYLASLRSLEFQ 185
Score = 38 (18.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPE 358
+T+L A C+A ++ N++ ++ L E
Sbjct: 1115 LTNLQAAAAQCHANSLPLNSTPQLDNSLTE 1144
>MGI|MGI:2140219 [details] [associations]
symbol:Lrrc19 "leucine rich repeat containing 19"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] MGI:MGI:2140219 GO:GO:0016021 InterPro:IPR000483
SMART:SM00082 GeneTree:ENSGT00680000099859 EMBL:AL732597 CTD:64922
eggNOG:NOG316787 HOGENOM:HOG000049223 HOVERGEN:HBG052345
OMA:VIFEQLH OrthoDB:EOG43TZVS EMBL:AK033594 EMBL:BC061228
IPI:IPI00227690 RefSeq:NP_780514.1 UniGene:Mm.26760
ProteinModelPortal:Q8BZT5 SMR:Q8BZT5 PhosphoSite:Q8BZT5
PRIDE:Q8BZT5 Ensembl:ENSMUST00000053419 Ensembl:ENSMUST00000107101
GeneID:100061 KEGG:mmu:100061 UCSC:uc008tsh.1 InParanoid:B1AWG3
NextBio:354233 Bgee:Q8BZT5 CleanEx:MM_LRRC19 Genevestigator:Q8BZT5
GermOnline:ENSMUSG00000049799 Uniprot:Q8BZT5
Length = 364
Score = 191 (72.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 53/156 (33%), Positives = 84/156 (53%)
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
++L E+ L +N I L+ +F L++L + GN I+ ++ G F L LK + L +
Sbjct: 71 SLLTELYLMENNIIALYNSSFRNLLNLEILNICGNSISVIQQGSFVGLNELKQLFLCQNK 130
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRN 224
I ++ D + L L+ LNL GN ++ L ++ P+L+ L+LDGNPW C C L N
Sbjct: 131 ILQLNPDTFVPLNNLKVLNLQGNLIR-LFDAP--QLPHLEILTLDGNPWNCTCGLLELHN 187
Query: 225 WLLKSK--LYSHPLS-CTEPGMLQTKHWDDVKAQEF 257
WL S L + ++ C+ P L KH D +K+ F
Sbjct: 188 WLNTSNVTLENENMTMCSYPDEL--KH-DSIKSAPF 220
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/144 (29%), Positives = 76/144 (52%)
Query: 45 NFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL-QRIYLKNSGIREVHRDTFKY 103
N+T +P + +++ +LDL+ N+I+ ++ + + + +L +YL + I ++ +F+
Sbjct: 35 NYTLIPEGISTNVTILDLSYNRITLNAADS-RVLQMYSLLTELYLMENNIIALYNSSFRN 93
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L L +++ N I+ + Q +F+G + LK L+L N I +L F L LK + LQ
Sbjct: 94 LLNLEILNICGNSISVIQQGSFVGLNELKQLFLCQNKILQLNPDTFVPLNNLKVLNLQGN 153
Query: 164 QIHSVHKDALIHLTALESLNLNGN 187
I L HL E L L+GN
Sbjct: 154 LIRLFDAPQLPHL---EILTLDGN 174
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 199 (75.1 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 63/229 (27%), Positives = 107/229 (46%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L+L +N I LT +F + +L+ + LK + + ++ F L + +DLS N
Sbjct: 220 LQELNLRSNLIRVLTPGSFPA----SLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNS 275
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ + D F L+ L L+ N I+ L F L +K++ LQ + SV L
Sbjct: 276 LTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQ 335
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTL-SLDGNPWCCDCHLRSFRNWLLKSKLYSHP 235
L+ L+L+ N L+ + S FF + + + L GNPW CDC + F +WL + +
Sbjct: 336 HDLQLLDLSNNSLRSIP-SGFFEDLDFQCVFELRGNPWSCDCGIHYFYDWLKYNHKHVKD 394
Query: 236 LS---CTEPGMLQTKHWDDVKAQEFACPPNVTIKESMVIREAGGNVTMS 281
LS C P ++Q + V ++ C N + +I G++ S
Sbjct: 395 LSRVSCEAPELIQGHNLRSVDREQLVCSRNSSSNSPEMISVDEGSIQCS 443
Score = 178 (67.7 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 53/190 (27%), Positives = 92/190 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP+ C+C G K +C D +LP + + ++ L + + I L +++F L L
Sbjct: 21 CPEPCQC--FSGSK-LVCSDDRMKSLPVNISTQVRELIVVASGIPDLDQQSFPET--LRL 75
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQD--TFLGNDRLKVLYLNGNPI 141
++ N ++ V + F+ L L E+++S N I W+ D TF L L LN N +
Sbjct: 76 SKLVFLNGMLKSVSGEAFERLVELRELEISGN-ICWMSLDIQTFSSLTNLTRLLLNNNKL 134
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
+ + AG F L L+ ++L+ + + L L+ L+L+ N++ LS +F
Sbjct: 135 SGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNS 194
Query: 202 NLKTLSLDGN 211
L+ LSL N
Sbjct: 195 ELRVLSLQAN 204
Score = 128 (50.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 43/170 (25%), Positives = 84/170 (49%)
Query: 43 DANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLK-NSGIREVHRDTF 101
D + + P TL + L N + ++ EAF+ L+ L+ + + N + TF
Sbjct: 63 DLDQQSFPETLR--LSKLVFLNGMLKSVSGEAFER--LVELRELEISGNICWMSLDIQTF 118
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
LT L + L++N+++ + F +L++L L GN ++ L F +L L+ ++L
Sbjct: 119 SSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLS 178
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
QI S+ + + + L L+L N++ +L + +F +L+ L+L N
Sbjct: 179 FNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSN 228
Score = 38 (18.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 332 LDAGEYTCYAENIRGNASGE 351
+D G C + ++G AS E
Sbjct: 435 VDEGSIQCSVQELKGTASIE 454
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 213 (80.0 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 58/171 (33%), Positives = 92/171 (53%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++Q+L+L++NKI L E F + +Q +YL+N+ I ++ F L L +DLS N
Sbjct: 326 NLQILNLSSNKIVALPTELFAEQAKI-IQEVYLQNNSISVLNPQLFSNLDQLQALDLSMN 384
Query: 116 QIA--WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDAL 173
QI W+ ++TF+G RL +L L+ N +T+L F L L+ + L+H Q+ ++ D
Sbjct: 385 QITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTF 444
Query: 174 IHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRN 224
+ L +L L+ N+LK+L L LSLD N H +FRN
Sbjct: 445 APMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNA-LIGVHPDAFRN 494
Score = 181 (68.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 46/150 (30%), Positives = 74/150 (49%)
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
++ +Y+ + E+ +F L + +++ +A ++ TF G RL +L+L N
Sbjct: 859 MDTSELYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNH 918
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
I L +F L L+ + LQ +I S+ + L LE L L+GNRL H
Sbjct: 919 IISLEGNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNRLMHFEVWQLSAN 978
Query: 201 PNLKTLSLDGNPWCCDC-HLRSFRNWLLKS 229
P L +SL N W C+C +L FRN+L +S
Sbjct: 979 PYLVEISLADNQWSCECGYLARFRNYLGQS 1008
Score = 164 (62.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 47/142 (33%), Positives = 76/142 (53%)
Query: 51 STLDSDIQVLDLNNNKIS--YLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILV 108
S LD +Q LDL+ N+I+ ++ K F +GL+ L + L ++ + ++ + F L L
Sbjct: 371 SNLDQ-LQALDLSMNQITSTWIDKNTF--VGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQ 427
Query: 109 EVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSV 168
++L NQ+ + DTF + L L L+ N + L A L L + L + + V
Sbjct: 428 ILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGV 487
Query: 169 HKDALIHLTALESLNLNGNRLK 190
H DA + +AL+ LNLNGN+LK
Sbjct: 488 HPDAFRNCSALQDLNLNGNQLK 509
Score = 153 (58.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/139 (28%), Positives = 60/139 (43%)
Query: 24 CPDTCRC--KWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
CP C C T C A ++ +P + D L ++ N L +F +G
Sbjct: 826 CPTNCTCFHDQTWSTNIVECSGAAYSEMPRRVPMDTSELYIDGNNFVELAGHSF--LGRK 883
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
NL +Y NS + ++ TF L L+ + L DN I L + F + L+ LYL N I
Sbjct: 884 NLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKI 943
Query: 142 TELRAGQFPKLPYLKTIEL 160
+ G F L L+ + L
Sbjct: 944 ASIANGSFQMLRKLEVLRL 962
Score = 142 (55.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 48/168 (28%), Positives = 80/168 (47%)
Query: 48 ALPSTLDSD----IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
ALP+ L ++ IQ + L NN IS L + F ++ L + + + ++TF
Sbjct: 339 ALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVG 398
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L LV ++LS N++ L + F L++L L N + + A F + L T+ L H
Sbjct: 399 LIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHN 458
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++ + AL L L L+L+ N L + F L+ L+L+GN
Sbjct: 459 KLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGN 506
Score = 137 (53.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 49/180 (27%), Positives = 86/180 (47%)
Query: 36 KKSALCKDANFTALPSTLDS-DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIR 94
+ ++ + A ++ ST S D++ LD+++N L F + L L+ + + N+GI
Sbjct: 257 ESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGT--LRRLRVLSVNNNGIS 314
Query: 95 EVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL-KVLYLNGNPITELRAGQFPKLP 153
+ L L ++LS N+I L + F ++ + +YL N I+ L F L
Sbjct: 315 MIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLD 374
Query: 154 YLKTIELQHCQIHS--VHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ ++L QI S + K+ + L L LNL+ N+L L +F L+ L+L N
Sbjct: 375 QLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHN 434
Score = 37 (18.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 545 RRPRSKVIEPSSLVRVGPKYDNM 567
RR + + PS L P YD++
Sbjct: 1367 RRSQHEYAVPSYLPSAAPAYDSV 1389
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 194 (73.4 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 55/168 (32%), Positives = 92/168 (54%)
Query: 47 TALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T LP+T ++Q+LDL+ N+++ L E F GL LQ ++L+++ +R F
Sbjct: 123 TKLPNTTFIHLINLQILDLSFNQMTALEPELFH--GLRKLQILHLRSNSLRTTPVRAFWD 180
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L + LS+N++ L ++ F G +L+ L+L N +T++ FP+L L+ + LQ
Sbjct: 181 CRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWN 240
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+I+++ T LE L+L GN ++ L VF P+LK L LD N
Sbjct: 241 KINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNN 288
Score = 194 (73.4 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 58/190 (30%), Positives = 89/190 (46%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLL 81
T CP CRC+ C A P +D L L +N IS L+ + F G
Sbjct: 33 TTCPQKCRCE----DLQFYCDTQGLLAPPDGVDKGALGLSLRHNSISELSSDQF--FGFT 86
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
L ++L ++ I VH D F+ L L +++LS N+I L TF+ L++L L+ N +
Sbjct: 87 QLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQM 146
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTP 201
T L F L L+ + L+ + + A +LE L L+ NRL+ L+ + F
Sbjct: 147 TALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLI 206
Query: 202 NLKTLSLDGN 211
L+ L L+ N
Sbjct: 207 KLRELHLEHN 216
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 48/190 (25%), Positives = 82/190 (43%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q+L L +N + AF +L+ + L N+ +R + R+ F L L E+ L N
Sbjct: 160 LQILHLRSNSLRTTPVRAFWDCR--SLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNH 217
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ ++ F L+ LYL N I L + K L+ ++L +I + + L
Sbjct: 218 LTKINLAHFPRLVALQFLYLQWNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETL 277
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSK-LYSHP 235
+L+ L L+ N+L +L +L + L N W C + + WL K + H
Sbjct: 278 PSLKILLLDNNKLSNLDSQTMDMWKSLNVIGLSSNLWECTKRICNLATWLSTFKGRWEHS 337
Query: 236 LSCTEPGMLQ 245
+ C P Q
Sbjct: 338 ILCYSPEYAQ 347
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N+I+ + ++AF+ GL L+ + L ++ I ++ TF +L L +DLS NQ+
Sbjct: 91 LHLDHNQITTVHEDAFQ--GLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTA 148
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + F G +L++L+L N + F L+ + L + ++ S+ ++ L L
Sbjct: 149 LEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKL 208
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
L+L N L ++ + F P L L W +L S W
Sbjct: 209 RELHLEHNHLTKINLAHF---PRLVALQFLYLQWNKINNLTSTMEW 251
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 195 (73.7 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 89/356 (25%), Positives = 153/356 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C C A A+P+ L + L + N I+ L + F +I L
Sbjct: 25 CPSECTCSRA---SQVECTGARIVAVPTPLPWNAMSLQILNTHITELNESPFLNISALIA 81
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
RI KN + + F+ L L + L++N++ L F G D L+ L L+ N + +
Sbjct: 82 LRIE-KNE-LSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQ 139
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
++ F + LK ++L + + A HL L LNL N L H+S VF NL
Sbjct: 140 IQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNL 199
Query: 204 KTLSLDGNPWCCDCHLRSFRNW--LLKSKLYSHPLSCTEPGMLQTKHWDD---VKAQEFA 258
+ L L N D + +F L + L + + PG+ H + +
Sbjct: 200 QVLRLYENR-LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHIS 258
Query: 259 -CPPNVTIKESMVIREA--GGNVT-MSCYVYGDPEPTI--LWLLNGQV--LHNSSFDLLE 310
PP+V ++ + R G ++ +S ++G P P + LWL + + L ++ F L
Sbjct: 259 QLPPSVFMQLPQLNRLTLFGNSLKELSPGIFG-PMPNLRELWLYDNHISSLPDNVFSNLR 317
Query: 311 EEEGDALFEKSVSIT---LFN-VTDL-DAGEYTCYAENIRGNASGEISLDLPEINL 361
+ + L +S FN +T+L + +T +++ GN ++ +L I+L
Sbjct: 318 QLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLA-NLQNISL 372
Score = 176 (67.0 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 49/168 (29%), Positives = 82/168 (48%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L N + L+ F + NL+ ++L ++ I + + F L L + LS NQI++
Sbjct: 274 LTLFGNSLKELSPGIFGPMP--NLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISF 331
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
+ F G L+ L L+ N + +L F L L+ I LQ+ ++ + + ++ L
Sbjct: 332 ISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGL 391
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLL 227
++ L N+L++L +F L L L NPW CD + RNWLL
Sbjct: 392 MAIQLQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLL 439
Score = 162 (62.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 54/196 (27%), Positives = 94/196 (47%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++Q L L+NN IS L F + LN R+ L + ++E+ F + L E+ L DN
Sbjct: 246 NLQRLYLSNNHISQLPPSVFMQLPQLN--RLTLFGNSLKELSPGIFGPMPNLRELWLYDN 303
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I+ L + F +L+VL L+ N I+ + G F L L+ + L + + +
Sbjct: 304 HISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRM 363
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW--LLKSKLYS 233
L L++++L NRL+ L ++F L + L N + L F + L + +LY
Sbjct: 364 LANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQ-LENLPLGIFDHLGKLCELRLYD 422
Query: 234 HPLSCTEPGMLQTKHW 249
+P C + +L ++W
Sbjct: 423 NPWRC-DSDILPLRNW 437
Score = 159 (61.0 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 54/168 (32%), Positives = 78/168 (46%)
Query: 47 TALP-STLDS--DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKY 103
T +P T D ++Q L L N+I L+ F + NLQR+YL N+ I ++ F
Sbjct: 210 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNH--NLQRLYLSNNHISQLPPSVFMQ 267
Query: 104 LTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHC 163
L L + L N + L F L+ L+L N I+ L F L L+ + L
Sbjct: 268 LPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRN 327
Query: 164 QIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
QI + A LT L L+L+ N L+ L +VF NL+ +SL N
Sbjct: 328 QISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNN 375
Score = 44 (20.5 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 497 NIFI-SVSVSQEPPGSDPPKYPDLIDMPHRSVSVGTGPGTNP 537
N+ + SV V + P + P YPD P + T T+P
Sbjct: 470 NVAVPSVHVPEVPSYPETPWYPDTPSYPDTTSVSSTTELTSP 511
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 194 (73.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 69/227 (30%), Positives = 92/227 (40%)
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLK 190
L+ L+ NPI + + L L+ L ++ S+ + L L LN++ N L
Sbjct: 291 LRFFNLSFNPIEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLS 350
Query: 191 HLSESVFFPTPNLKTLSLDGNPWCCDCHLR-SFRN-WLLKSKLYSHPLSCTEPGMLQTKH 248
L ES F NL+TL+L NP CDC L FR W L P SC P LQ K
Sbjct: 351 TLEESAFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNR-QQP-SCETPEFLQGKE 408
Query: 249 WDD----VKAQEFACPPNVTIKESMVIR---EAGGNVTMSCYVYGDPEPTILWLL-NGQV 300
+ D + F C + I++ I + G V C GDP P I+W Q
Sbjct: 409 FKDFPDVLPPNYFTCQKS-KIRDHKAIHRFVDEGTTVQFPCQADGDPTPMIMWQSPKKQF 467
Query: 301 LHNSSFDLLEEEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGN 347
+ S L L + I D G YTC+A N GN
Sbjct: 468 ITTKSIGRLSVSLDGTLEVRYAQIQ-------DNGTYTCFAVNAGGN 507
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 52/196 (26%), Positives = 83/196 (42%)
Query: 13 LGTTGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK 72
LGT S T CP C C + ++S +C LP + D ++LDL+ N++ +
Sbjct: 33 LGTVLSGSATGCPSRCEC--SAQERSVVCHRRKLITLPEGIPIDTRLLDLSKNRLKAINP 90
Query: 73 EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLK 132
E F + L+ + L + I + F L L + L +N + + F G L
Sbjct: 91 EEF--LNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNLT 148
Query: 133 VLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHL 192
L ++ N I L F +L LK +E+ + + A L++LE L + L +
Sbjct: 149 RLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSV 208
Query: 193 SESVFFPTPNLKTLSL 208
F NL TL L
Sbjct: 209 PTEAFSHLHNLLTLKL 224
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L LN N IS + AF + LL L+ + L+N+ ++ + F L+ L +D+S+N+
Sbjct: 99 LEDLQLNENIISVIEPGAFSN--LLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENK 156
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
I L F LK L + N + + F L L+ + ++ C + SV +A HL
Sbjct: 157 IVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHL 216
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
L +L L + + + F LK L + P
Sbjct: 217 HNLLTLKLRHLNVNVIRDFSFRRLYRLKILEIANWP 252
>RGD|1303079 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0007156
"homophilic cell adhesion" evidence=IPI] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IPI] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0030424 "axon"
evidence=IEA] [GO:0042552 "myelination" evidence=IEP] [GO:0050772
"positive regulation of axonogenesis" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1303079 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042552 GO:GO:0050772 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57463
eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237729
IPI:IPI00201253 RefSeq:NP_996764.1 UniGene:Rn.116338
ProteinModelPortal:Q80ZD7 STRING:Q80ZD7 GeneID:295365
KEGG:rno:295365 UCSC:RGD:1303079 InParanoid:Q80ZD7 NextBio:639469
ArrayExpress:Q80ZD7 Genevestigator:Q80ZD7 Uniprot:Q80ZD7
Length = 493
Score = 192 (72.6 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 96/367 (26%), Positives = 145/367 (39%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + C +P +L +LDL++N +S L E + L NL
Sbjct: 34 CPANCLCASNI----LSCSKQQLPNVPQSLPGYTALLDLSHNNLSRLKAE-WTPTRLTNL 88
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L ++ + + + F + L +DLS N + L + F G L+VL L N I
Sbjct: 89 HSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSGLQALEVLLLYNNHIVV 148
Query: 144 LRAGQFPKLPYLKTIELQHCQIH----SVHKDALIHLTALESLNLNGNRLKHLSESVFFP 199
+ F + L+ + L I + KDA L L L+L+ N+LK L +
Sbjct: 149 VDRNAFEDMAQLQKLYLSQNMISRFPLELIKDAN-RLPKLTLLDLSSNKLKKLPLTDLQK 207
Query: 200 TPN-LKT-LSLDGNPWCCDCHL-RSFRNWL---LKSKL-YSHPLSCTEPGMLQTKHWDDV 252
P +K L L NP CDC L + F +W L S + + L C L D
Sbjct: 208 LPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYCVHSKKLHNVFSLDF 267
Query: 253 KAQEFACPPNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWLL--NGQVLHNSSFDLLE 310
F C KES G +T++C T +W+ N QVL+ + +
Sbjct: 268 ----FNCSE---YKESAWEAHLGDTLTITCDTK-QQGMTKVWVTPSNEQVLNQGANGTVT 319
Query: 311 EEEGDALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDLPEINLATTLSKTDS 370
E L K V + D G YTCYA N + + L + L ++
Sbjct: 320 VSEDGNLHFKEVQVE-------DGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNT 372
Query: 371 WYMLVLG 377
Y ++G
Sbjct: 373 AYTTLVG 379
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 193 (73.0 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 66/214 (30%), Positives = 104/214 (48%)
Query: 38 SALCKDANFTA-LPSTL---DSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGI 93
S+L N A LPS L ++ +L L N ++ L F +G LQ ++L + +
Sbjct: 245 SSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMG--GLQELWLNRTQL 302
Query: 94 REVHRDTFKYLTIL--VEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPK 151
R + F+ L+ L + V LS +++ L Q F G L+VL L+ N +T L G
Sbjct: 303 RTLPAAAFRNLSRLRYLGVTLSP-RLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRG 361
Query: 152 LPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+ + L+ ++ ++ + +L++LES+ L+ N+L+ L VF P L + L N
Sbjct: 362 LGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHN 421
Query: 212 PWCCDCHLRSFRNWLLKSK-LYS--HPLSCTEPG 242
W CDC L F WL + L P C PG
Sbjct: 422 SWRCDCGLGPFLGWLRQHLGLVGGEEPPRCAGPG 455
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 59/211 (27%), Positives = 105/211 (49%)
Query: 40 LCKDANFTAL-PSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREV 96
+ D++ +A+ P T I++ L L+ NKI++L + LL ++++L ++ +R +
Sbjct: 80 MISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLL--EQLFLDHNALRGI 137
Query: 97 HRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLK 156
++ F+ L L E+ L+ NQ+ +L F + LK+L L+GN +T L G L+
Sbjct: 138 DQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLE 197
Query: 157 TIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWC-- 214
+ L ++ S+ L L AL L + N ++ ++ F PNL +L+L N
Sbjct: 198 RLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFL 257
Query: 215 -CDCHLRSFRNWLLKSKLYSHPLSCTEPGML 244
L S LL L+ +PL+ PG+L
Sbjct: 258 PSALFLHSHNLTLLT--LFENPLA-ELPGVL 285
Score = 155 (59.6 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 44/136 (32%), Positives = 67/136 (49%)
Query: 77 SIGL-LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLY 135
++GL NL I L G + +F +T+L + +SD+ I+ + TF +LK L
Sbjct: 45 ALGLPTNLTHILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLR 104
Query: 136 LNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSES 195
L+ N IT L K+ L+ + L H + + ++ L L+ L LN N+L L S
Sbjct: 105 LSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPAS 164
Query: 196 VFFPTPNLKTLSLDGN 211
+F NLK L L GN
Sbjct: 165 LFTNLENLKLLDLSGN 180
Score = 128 (50.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 47/171 (27%), Positives = 77/171 (45%)
Query: 45 NFTALPSTL---DSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
N T LP L + ++ L L++N++ L S+G L + + IR + F
Sbjct: 181 NLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALT--ELQFHRNHIRSIAPGAF 238
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L L + LS N +A+L FL + L +L L NP+ EL F ++ L+ + L
Sbjct: 239 DRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQELWLN 298
Query: 162 HCQIHSVHKDALIHLTALESLNLN-GNRLKHLSESVFFPTPNLKTLSLDGN 211
Q+ ++ A +L+ L L + RL L + F L+ L+L N
Sbjct: 299 RTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSN 349
>UNIPROTKB|F1MK80 [details] [associations]
symbol:GPR125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000203 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR007110 InterPro:IPR017981
Pfam:PF00002 Pfam:PF01825 Pfam:PF02793 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00303 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00390000016104 OMA:HHIPVNV EMBL:DAAA02017074
EMBL:DAAA02017075 EMBL:DAAA02017076 IPI:IPI00687710
Ensembl:ENSBTAT00000006107 Uniprot:F1MK80
Length = 1235
Score = 209 (78.6 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 65/254 (25%), Positives = 115/254 (45%)
Query: 112 LSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKD 171
LS+N+I+ L +F G L+ L L N I+ + G F L LK ++L + +I ++ D
Sbjct: 2 LSNNKISELKNGSFSGLSLLERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLNAD 61
Query: 172 ALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKL 231
LT L LNL+GN LS+ F +L++L CDC++ W+ + +
Sbjct: 62 IFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNI 121
Query: 232 YSHPLSCTEPGMLQTKHWDDVKAQEFAC-PP------NVTIKESMVIREAGGNVTMSCYV 284
C P LQ + VK + C PP +T V+ E G ++ C
Sbjct: 122 TVRDTRCVYPKSLQAQPVTGVKQELLTCDPPLELPSFYMTPSHRQVVFE-GDSLPFQCMA 180
Query: 285 -YGDPEPTILWLLNGQVLHNSSFDLLEEEEGDALFEKSV---SITLFNVTDLDAGEYTCY 340
Y D + +LW +G+++ + E+ + + S+ ++T+ N+ G + C+
Sbjct: 181 SYIDQDMQVLWYQDGRIVETDESQGIFVEK-NMIHNCSLIASALTISNIQAGSTGNWGCH 239
Query: 341 AENIRGNASGEISL 354
+ RGN + + +
Sbjct: 240 VQTKRGNNTRTVDI 253
Score = 139 (54.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 62 LNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLH 121
L+NNKIS L +F + LL +R+ L+N+ I + F L+ L +DL++N+I L+
Sbjct: 2 LSNNKISELKNGSFSGLSLL--ERLDLRNNLISSIDPGAFWGLSSLKRLDLTNNRIGCLN 59
Query: 122 QDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
D F G L L L+GN + L G F L L+++E Q
Sbjct: 60 ADIFRGLTNLVRLNLSGNLFSSLSQGTFDYLGSLRSLEFQ 99
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 496 GNIFISVSVSQEPPGSDPP 514
G SV V+ +PP S P
Sbjct: 978 GRSTYSVQVNVQPPSSSGP 996
Score = 37 (18.1 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 329 VTDLDAGEYTCYAENIRGNASGEISLDLPE 358
+T+L A C+ ++ NA+ ++ L E
Sbjct: 1029 LTNLQAAAAQCHTNSLPLNATPQLDNSLTE 1058
>RGD|1308398 [details] [associations]
symbol:Lrrc26 "leucine rich repeat containing 26" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0008076 "voltage-gated potassium
channel complex" evidence=ISO;ISS] [GO:0015459 "potassium channel
regulator activity" evidence=ISO;ISS] InterPro:IPR001611
PROSITE:PS51450 RGD:1308398 GO:GO:0005737 GO:GO:0005856
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008076 GO:GO:0015459 GO:GO:0005216 InterPro:IPR000372
SMART:SM00013 HSSP:P07359 CTD:389816 eggNOG:NOG235918
HOGENOM:HOG000113367 HOVERGEN:HBG096585 OMA:DAAFSHC
OrthoDB:EOG4V438G GeneTree:ENSGT00700000104083 EMBL:BC061729
IPI:IPI00421581 RefSeq:NP_001014075.1 UniGene:Rn.154622
ProteinModelPortal:Q6P7C4 PRIDE:Q6P7C4 Ensembl:ENSRNOT00000015242
GeneID:311803 KEGG:rno:311803 UCSC:RGD:1308398 InParanoid:Q6P7C4
NextBio:664209 Genevestigator:Q6P7C4 Uniprot:Q6P7C4
Length = 334
Score = 187 (70.9 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 58/177 (32%), Positives = 84/177 (47%)
Query: 13 LGT--TGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYL 70
+GT + SP CP+ C C + G K A C A+P+ L ++ L L+ N++S L
Sbjct: 34 IGTDPSKSPVAPVCPEACSC--SPGGK-ANCSALALPAVPAGLSWQVRSLLLDRNRVSTL 90
Query: 71 TKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDR 130
AF G L + L+ + +R VH F L +L +DLS NQ+ L TF
Sbjct: 91 PPGAFADAGALLY--LVLRENRLRSVHARAFWGLGVLQRLDLSSNQLETLSPGTFTPLRA 148
Query: 131 LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
L L L GN + L LP L+ + LQ + ++ L L AL+ L L+GN
Sbjct: 149 LSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNSLSALEAGLLNSLPALDVLRLHGN 205
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/174 (28%), Positives = 72/174 (41%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIH 166
L+ + L +N++ +H F G L+ L L+ N + L G F L L + L ++
Sbjct: 101 LLYLVLRENRLRSVHARAFWGLGVLQRLDLSSNQLETLSPGTFTPLRALSFLSLAGNRLA 160
Query: 167 SVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL 226
+ L L L L+L N L L + P L L L GNPW C C LR WL
Sbjct: 161 LLEPSILGPLPLLRVLSLQDNSLSALEAGLLNSLPALDVLRLHGNPWACSCALRPLCTWL 220
Query: 227 LKSKL---YSHPLSCTEPGMLQTKHW-DDVKAQEFA-CPPNVTIKESMVIREAG 275
K + L C P LQT + D F C ++ ++ V+ G
Sbjct: 221 RKHPRPTSETETLLCVSP-KLQTLNLLTDFPDNAFKQCTQSLAARDLAVVYALG 273
>MGI|MGI:2385320 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:2385320
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OMA:RRINEYF
OrthoDB:EOG42JNR2 EMBL:AK044631 EMBL:BC032270 IPI:IPI00279273
RefSeq:NP_666357.2 UniGene:Mm.37907 ProteinModelPortal:Q8K099
SMR:Q8K099 PhosphoSite:Q8K099 PRIDE:Q8K099
Ensembl:ENSMUST00000120052 GeneID:239037 KEGG:mmu:239037
UCSC:uc007tbr.2 InParanoid:Q8K099 NextBio:383963 Bgee:Q8K099
Genevestigator:Q8K099 GermOnline:ENSMUSG00000041044 Uniprot:Q8K099
Length = 624
Score = 200 (75.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 89/370 (24%), Positives = 153/370 (41%)
Query: 17 GSPD--WTDCPDTCRCKWTL---GKKS--ALCKDANFTALPSTLDSDIQVLDLNNNKISY 69
G P W CP C C + G K+ +C D + T P+++ D L L I
Sbjct: 14 GGPHQAWGFCPSECSCSLRILSDGSKARTVVCSDPDLTLPPASIPPDTCKLRLERTAIRR 73
Query: 70 LTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGND 129
+ E F+ + L++++L + + E+ + L L E+ L N++
Sbjct: 74 VPGETFRPLS--RLEQLWLPYNALSELSALMLRGLRRLRELRLPGNRLVTFPWAALRDTP 131
Query: 130 RLKVLYLNGNPITEL--RAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGN 187
+L++L L N ++ L A F L L ++L + Q+ + ++ L+ + A
Sbjct: 132 QLQLLDLQANRLSTLPPEAAHF--LENLTFLDLSNNQLMRLPEE-LLDVWA--------- 179
Query: 188 RLKHLSESVFFPTPNLKT-LSLDGNPWCCDCHLRSFRN----WLLKSKLYSHP-LSCTEP 241
HL F + + L L NPW CDC L + W+ + ++ L C P
Sbjct: 180 ---HLKTGPFLSGHHARLILGLQDNPWVCDCRLYDLVHLLDGWVSSNLIFIEARLRCASP 236
Query: 242 GMLQTKHWDDVKAQEFACP---PNVTIKESMVIREAGGNVTMSCYVYGDPEPTILWL-LN 297
L + ++ ++ P P VT +I G V + C G P P + W N
Sbjct: 237 RSLAGVAFSQLELRKCQSPELRPGVT----SIISPLGSTVLLRCGATGIPGPEMSWRRAN 292
Query: 298 GQVLHNSSFDLLEEEEGD-ALFEKSVSITLFNVTDLDAGEYTCYAENIRGNASGEISLDL 356
G+ L+ + + + L + V ++LF D+G+Y C A+N G + ISL +
Sbjct: 293 GRPLNGTVHQEVSSDGSSWTLLDLPV-VSLF-----DSGDYICQAKNFLGASETLISLIV 346
Query: 357 PEINLATTLS 366
E +T S
Sbjct: 347 TEPQTSTGYS 356
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 442 ALGSQPDMELIEQSLAME 459
AL ++P M I++ LA++
Sbjct: 392 ALATKPSMPSIKEELALQ 409
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 206 (77.6 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 67/243 (27%), Positives = 109/243 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C + C C+ G + C++ +L + L L+ N +S L F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEF--VNYT 105
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++L ++ I+++ F L L + L++N++ L DTFLG + L+ L ++ N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE-SVFFPT 200
+ + F KL L+ + L + + + L L L+L GNRLK L +
Sbjct: 166 SVIEPNAFGKLHMLQVLILNDNLLSGLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHM 224
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS---CTEPGMLQTKHWDDVKAQEF 257
+ L L+ NPW C C L S ++WL S YS + C P L + D+V QE
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWL-DSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
Query: 258 ACP 260
CP
Sbjct: 284 -CP 285
Score = 193 (73.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 66/252 (26%), Positives = 108/252 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKK--SALCKDANFTALPSTLDSDI--QVLDLNNNKISYLT 71
T SP +CP C C + + C++ ++ + + L N I+ +
Sbjct: 366 TKSPVPLECPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYITVVR 425
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F L+L ++L N+ I + F L L + L+ N+I L + F G L
Sbjct: 426 RTDFLEATGLDL--LHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSL 483
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
+ L+L N I E++AG F +P L+ + L + Q+ ++ LT L LNL GN
Sbjct: 484 QYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRGNSFTS 542
Query: 192 LSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKH 248
L S V +L + L NPW C C + + W+ LK + + C P +
Sbjct: 543 LPVSGVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWIEQLKVGVLVDEVICKAPKKFAETY 602
Query: 249 WDDVKAQEFACP 260
+K+ E CP
Sbjct: 603 MRSIKS-ELLCP 613
Score = 37 (18.1 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 505 SQEPPGSDPPKYP 517
S P GS P+YP
Sbjct: 865 STTPAGSSLPEYP 877
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 188 (71.2 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 54/191 (28%), Positives = 88/191 (46%)
Query: 22 TDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSI-GL 80
T CP C C L + +C + +P ++ ++L+L N + L F + GL
Sbjct: 25 TQCPSQCHCHGDL--QHVICDNVGLKKIPRISEAT-RLLNLQRNNLGNLPTGGFSEMKGL 81
Query: 81 LNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNP 140
++L +L++ IRE+ FK L L+ + LSDN+I+ + F L LYL+GN
Sbjct: 82 ISL---HLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQ 138
Query: 141 ITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPT 200
IT L G F + L ++L + ++ + L L ++GN L +
Sbjct: 139 ITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEV 198
Query: 201 PNLKTLSLDGN 211
NL L+LD N
Sbjct: 199 ENLAILTLDQN 209
Score = 180 (68.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 59/221 (26%), Positives = 104/221 (47%)
Query: 43 DAN-FTALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHR 98
D N T+LP + S ++ +L LNNNK+ L FK G +L+ +Y+ + + +
Sbjct: 135 DGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFK--GAKDLRWLYMSGNELSSIQP 192
Query: 99 DTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKV---LYLNGNPITELRAGQFPKLP-Y 154
+ + L + L N ++ L +L+V L L+ NP++ + F Y
Sbjct: 193 GSLDEVENLAILTLDQNNLSTY---PLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRY 249
Query: 155 LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWC 214
++ + L + A +TAL+SL+L N+L+ L S+ F T ++ ++L NPW
Sbjct: 250 MEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSLPNSLEFST--IQNITLFNNPWS 307
Query: 215 CDCHLRSFRNWLLKSKLYSHPLS-CTEPGMLQTKHWDDVKA 254
C C L + R W+ ++ + P + C P + K D A
Sbjct: 308 CTCPLTNLRKWMDTTR--NRPDAVCASPANQKGKQIRDSTA 346
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N+IS + AF+ L L +YL + I + + F + L + L++N++
Sbjct: 108 LYLSDNEISTIKPGAFED--LTELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRE 165
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L TF G L+ LY++GN ++ ++ G ++ L + L + + A+ L +
Sbjct: 166 LQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVV 225
Query: 180 ESLNLNGNRLKHLSESVF 197
E LNL+ N L + + F
Sbjct: 226 EELNLSKNPLSLIPDHAF 243
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 206 (77.6 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 67/243 (27%), Positives = 110/243 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQV--LDLNNNKISYLTKEAFKSIGLL 81
C + C C+ G + C++ +L + L L+ N ++ L F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
++L ++ I+++ F L L + L++N++ L DTFLG + L+ L ++ N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 142 TELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE-SVFFPT 200
+ + F KL L+ + L + S+ + L L L+L GNRLK L +
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNN-LFRFVPLTHLDLRGNRLKLLPYMGLLQHM 224
Query: 201 PNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHPLS---CTEPGMLQTKHWDDVKAQEF 257
+ L L+ NPW C C L S ++WL S YS + C P L + D+V QE
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWL-DSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
Query: 258 ACP 260
CP
Sbjct: 284 -CP 285
Score = 180 (68.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 64/252 (25%), Positives = 105/252 (41%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKK--SALCKDANFTALPSTLDSDI--QVLDLNNNKISYLT 71
T SP +CP C C + + C++ ++ + + L N I+ +
Sbjct: 366 TKSPVPLECPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIALVR 425
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
+ F L+L ++L N+ I + F LT L + L+ N+I L + F G L
Sbjct: 426 RSDFLEATGLDL--LHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSL 483
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
+ L+L N I E++ G F +P L+ + L + + ++ LT L LNL N
Sbjct: 484 QYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTS 542
Query: 192 LSES-VFFPTPNLKTLSLDGNPWCCDCHLRSFRNWL--LKSKLYSHPLSCTEPGMLQTKH 248
L S V +L + L NPW C C + + W+ LK + + C P
Sbjct: 543 LPVSGVLDQLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETD 602
Query: 249 WDDVKAQEFACP 260
+K+ E CP
Sbjct: 603 MRSIKS-ELLCP 613
Score = 37 (18.1 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 504 VSQEPPGSDPPKYP 517
+ Q+PP PP P
Sbjct: 794 LQQQPPPPPPPPQP 807
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 192 (72.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 61/188 (32%), Positives = 86/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC GK C+ F +P + Q L L N I L F GL L
Sbjct: 34 CPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNSIQKLKSNQFA--GLNQL 87
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+YL ++ I V D F+ + L E+ LS N+I +LH TF L+ L L+ N +
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L++ QF L L + L+ + +V L+ L+L NRL+ LS + F L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 204 KTLSLDGN 211
K L L+ N
Sbjct: 208 KELHLEHN 215
Score = 188 (71.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/156 (32%), Positives = 88/156 (56%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ LDL+ NK+ L E FK GL L ++L+++ ++ V F+ L +DL N
Sbjct: 134 NLRNLDLSYNKLQTLQSEQFK--GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYN 191
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
++ L ++ F G +LK L+L N +++ FP+L L++I LQ +I SV +
Sbjct: 192 RLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWT 251
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++L +L+L+GN ++ + F PNL+ L+LD N
Sbjct: 252 WSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSN 287
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/152 (26%), Positives = 80/152 (52%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N IS + ++AF+ G+ L+ + L ++ I +H TF + L +DLS N++
Sbjct: 90 LYLDHNYISSVDEDAFQ--GIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + F G +L +L+L N + + F L ++L + ++ S+ ++A L L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L+L N+ ++ + F NL+++ L N
Sbjct: 208 KELHLEHNQFSKINFAHFPRLFNLRSIYLQWN 239
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/194 (24%), Positives = 83/194 (42%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L L +N + + F+ NL + L + +R + R+ F L L E+ L NQ +
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCR--NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
++ F L+ +YL N I + G L T++L I ++ L
Sbjct: 219 KINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN 278
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP-LS 237
L+ LNL+ N+L ++S+ +L +++L GN W C + WL K +
Sbjct: 279 LQKLNLDSNKLTNVSQETVNAWISLISITLSGNMWECSRSICPLFYWLKNFKGNKESTMI 338
Query: 238 CTEPGMLQTKHWDD 251
C P +Q + D
Sbjct: 339 CAGPKHIQGEKVSD 352
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 192 (72.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 61/188 (32%), Positives = 86/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC GK C+ F +P + Q L L N I L F GL L
Sbjct: 34 CPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNSIQKLKSNQFA--GLNQL 87
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+YL ++ I V D F+ + L E+ LS N+I +LH TF L+ L L+ N +
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L++ QF L L + L+ + +V L+ L+L NRL+ LS + F L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 204 KTLSLDGN 211
K L L+ N
Sbjct: 208 KELHLEHN 215
Score = 188 (71.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/156 (32%), Positives = 88/156 (56%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ LDL+ NK+ L E FK GL L ++L+++ ++ V F+ L +DL N
Sbjct: 134 NLRNLDLSYNKLQTLQSEQFK--GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYN 191
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
++ L ++ F G +LK L+L N +++ FP+L L++I LQ +I SV +
Sbjct: 192 RLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWT 251
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++L +L+L+GN ++ + F PNL+ L+LD N
Sbjct: 252 WSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSN 287
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/152 (26%), Positives = 80/152 (52%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N IS + ++AF+ G+ L+ + L ++ I +H TF + L +DLS N++
Sbjct: 90 LYLDHNYISSVDEDAFQ--GIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + F G +L +L+L N + + F L ++L + ++ S+ ++A L L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L+L N+ ++ + F NL+++ L N
Sbjct: 208 KELHLEHNQFSKINFAHFPRLFNLRSIYLQWN 239
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/194 (24%), Positives = 83/194 (42%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L L +N + + F+ NL + L + +R + R+ F L L E+ L NQ +
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCR--NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
++ F L+ +YL N I + G L T++L I ++ L
Sbjct: 219 KINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN 278
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP-LS 237
L+ LNL+ N+L ++S+ +L +++L GN W C + WL K +
Sbjct: 279 LQKLNLDSNKLTNVSQETVNAWISLISITLSGNMWECSRSICPLFYWLKNFKGNKESTMI 338
Query: 238 CTEPGMLQTKHWDD 251
C P +Q + D
Sbjct: 339 CAGPKHIQGEKVSD 352
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 192 (72.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 61/188 (32%), Positives = 86/188 (45%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC GK C+ F +P + Q L L N I L F GL L
Sbjct: 34 CPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNSIQKLKSNQFA--GLNQL 87
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+YL ++ I V D F+ + L E+ LS N+I +LH TF L+ L L+ N +
Sbjct: 88 IWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L++ QF L L + L+ + +V L+ L+L NRL+ LS + F L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 204 KTLSLDGN 211
K L L+ N
Sbjct: 208 KELHLEHN 215
Score = 187 (70.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 49/156 (31%), Positives = 88/156 (56%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ LDL+ NK+ L E FK GL L ++L+++ ++ V F+ L +DL N
Sbjct: 134 NLRNLDLSYNKLQTLQSEQFK--GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYN 191
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
++ L ++ F G +LK L+L N +++ FP+L L++I LQ +I S+ +
Sbjct: 192 RLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWT 251
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++L +L+L+GN ++ + F PNL+ L+LD N
Sbjct: 252 WSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSN 287
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/152 (26%), Positives = 80/152 (52%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N IS + ++AF+ G+ L+ + L ++ I +H TF + L +DLS N++
Sbjct: 90 LYLDHNYISSVDEDAFQ--GIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + F G +L +L+L N + + F L ++L + ++ S+ ++A L L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L+L N+ ++ + F NL+++ L N
Sbjct: 208 KELHLEHNQFSKINFAHFPRLFNLRSIYLQWN 239
Score = 131 (51.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 47/194 (24%), Positives = 81/194 (41%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L L +N + + F+ NL + L + +R + R+ F L L E+ L NQ +
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCR--NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
++ F L+ +YL N I + G L ++L I + L
Sbjct: 219 KINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPN 278
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSKLYSHP-LS 237
L+ LNL+ N+L ++S+ +L +++L GN W C + WL K +
Sbjct: 279 LQKLNLDSNKLTNISQETVNAWISLISITLSGNMWECSRSICPLFYWLKNFKGNKESTMI 338
Query: 238 CTEPGMLQTKHWDD 251
C P +Q + D
Sbjct: 339 CAGPKHIQGEKVSD 352
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 192 (72.6 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 50/177 (28%), Positives = 90/177 (50%)
Query: 53 LDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDL 112
LD + L L ++ + ++ F GL L+R++L+++ I + + L+ L+E+DL
Sbjct: 384 LDK-LHSLHLEHSCLGHVRLHTFA--GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDL 440
Query: 113 SDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDA 172
+ N++ L + F G L+ L L+ N +T L A L +++ H + ++ +
Sbjct: 441 TTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGL 500
Query: 173 LIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
L L L+L N L+ F P P L+ L LD NPW C C L++ R++ L++
Sbjct: 501 FSSLGRLRYLSLRNNSLQ-----TFSPQPGLERLWLDANPWDCSCPLKALRDFALQN 552
Score = 174 (66.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 52/152 (34%), Positives = 78/152 (51%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDL++N+++ L ++ F GLL L + L ++ I + TFK L L E+ L N+I
Sbjct: 270 LDLSHNRVAGLMEDTFP--GLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 327
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + TF G +L+VL LN N ITE+R G F L + + L + S+ + L L
Sbjct: 328 LGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKL 387
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
SL+L + L H+ F L+ L L N
Sbjct: 388 HSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 419
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/156 (32%), Positives = 78/156 (50%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
+++ LDL+ N + + F + L LQ++YL + I V F + L +DLS N
Sbjct: 218 ELRELDLSRNALRSVKANVF--VHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHN 275
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
++A L +DTF G L VL L N I LR F L +L+ ++L H +I + +
Sbjct: 276 RVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEG 335
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L LE L LN N++ + F N+ ++L GN
Sbjct: 336 LGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGN 371
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 45 NFTALPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
+ LP T+ ++ L L NK++YL F +G L+ + L + +R V + F
Sbjct: 180 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLG--ELRELDLSRNALRSVKANVF 237
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
+L L ++ L N I + FLG L+ L L+ N + L FP L L + L
Sbjct: 238 VHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLA 297
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
H I S+ L LE L L NR++ L E F L+ L+L+ N
Sbjct: 298 HNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDN 347
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 46/155 (29%), Positives = 78/155 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L L +N+I L + F+ +G L + + L ++ I EV F L + ++LS N
Sbjct: 315 LEELQLGHNRIRQLGERTFEGLGQLEV--LTLNDNQITEVRVGAFSGLFNVAVMNLSGNC 372
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L + F G D+L L+L + + +R F L L+ + L+ I S+ + +L L
Sbjct: 373 LRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGL 432
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+ L L+L NRL HL +F +L+ L L N
Sbjct: 433 SELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYN 467
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/200 (25%), Positives = 80/200 (40%)
Query: 14 GTTGSPDWTDCPDTCRCKWT--LGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLT 71
G + + CP C C + S C N T LP + + L L+ N +S +
Sbjct: 30 GASADAEGPQCPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIP 89
Query: 72 KEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRL 131
AF+++ L+ + L+ S +R + L L + L N++ L F L
Sbjct: 90 SAAFQNLSSLDF--LNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHTPSL 147
Query: 132 KVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKH 191
L L+ N + L G F L +L + L + + L L L L GN+L +
Sbjct: 148 ASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTY 207
Query: 192 LSESVFFPTPNLKTLSLDGN 211
L ++F L+ L L N
Sbjct: 208 LQPALFCGLGELRELDLSRN 227
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 54/197 (27%), Positives = 84/197 (42%)
Query: 16 TGSPDWTDCPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTK-EA 74
T PD D P + R W G N +++PS ++ LD N + S+L E
Sbjct: 65 THLPD--DIPVSTRALWLDGN--------NLSSIPSAAFQNLSSLDFLNLQGSWLRSLEP 114
Query: 75 FKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVL 134
+GL NL ++L+ + +R + F + L + LS N + L + F G L L
Sbjct: 115 QALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDL 174
Query: 135 YLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE 194
L N + L F L L + L ++ + L L L+L+ N L+ +
Sbjct: 175 NLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKA 234
Query: 195 SVFFPTPNLKTLSLDGN 211
+VF P L+ L LD N
Sbjct: 235 NVFVHLPRLQKLYLDRN 251
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 56 DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDN 115
++ V++L+ N + L + F+ GL L ++L++S + V TF L+ L + L DN
Sbjct: 362 NVAVMNLSGNCLRSLPERVFQ--GLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 419
Query: 116 QIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
I+ + + + G L L L N +T L F L +L+ + L + Q+ ++ + L
Sbjct: 420 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGP 479
Query: 176 LTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+++ N L+ L+E +F L+ LSL N
Sbjct: 480 LQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNN 515
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/164 (31%), Positives = 78/164 (47%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L+ N I+ + AF +G+ L+ + L ++ + + DTF L L + L+ N
Sbjct: 243 LQKLYLDRNLITAVAPRAF--LGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNA 300
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
IA L TF L+ L L N I +L F L L+ + L QI V A L
Sbjct: 301 IASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 360
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLR 220
+ +NL+GN L+ L E VF L +L L+ + C H+R
Sbjct: 361 FNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHS---CLGHVR 401
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 46 FTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLT 105
FT PS L S L L++N + L + F+ GL +L + L + + + F+ L
Sbjct: 141 FTHTPS-LAS----LSLSSNLLGRLEEGLFQ--GLSHLWDLNLGWNSLVVLPDTVFQGLG 193
Query: 106 ILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
L E+ L+ N++ +L F G L+ L L+ N + ++A F LP L+ + L I
Sbjct: 194 NLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLI 253
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
+V A + + AL L+L+ NR+ L E F L L L N
Sbjct: 254 TAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 299
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 192 (72.6 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 48/152 (31%), Positives = 81/152 (53%)
Query: 79 GLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNG 138
GL L+R++LK++G+ + + L L+E+DL+ NQ+ L F G +L+ L L+
Sbjct: 408 GLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSR 467
Query: 139 NPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFF 198
N + EL A L +++ H ++ ++ L L L L+L N L+ F
Sbjct: 468 NRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLR-----TFT 522
Query: 199 PTP-NLKTLSLDGNPWCCDCHLRSFRNWLLKS 229
P P L+ L L+GNPW C C L++ R++ L++
Sbjct: 523 PQPPGLERLWLEGNPWDCGCPLKALRDFALQN 554
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/177 (31%), Positives = 91/177 (51%)
Query: 35 GKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIR 94
G + A + A F+ L ++++ LDL+ N + + F + L LQ++YL + I
Sbjct: 203 GNRLAYLQPALFSGL-----AELRELDLSRNALRAIKANVF--VQLPRLQKLYLDRNLIA 255
Query: 95 EVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPY 154
V F L L +DLS N++A L +DTF G L+VL L+ N I LR F L +
Sbjct: 256 AVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHF 315
Query: 155 LKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+ ++L H +I + + + L LE L L+ N+L+ + F N+ ++L GN
Sbjct: 316 LEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGN 372
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 61/204 (29%), Positives = 85/204 (41%)
Query: 14 GTTGSPDWTDCPDTCRCKWT--LGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLT 71
GT G + CP C C + + S C N T LP + Q L L+ N +S +
Sbjct: 31 GTPGEAEGPACPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVP 90
Query: 72 KEAFK---SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGN 128
AF+ S+G LNLQ + + L L + L NQ+ L TF
Sbjct: 91 PAAFQNLSSLGFLNLQ-----GGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHT 145
Query: 129 DRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH-LTALESLNLNGN 187
L L L+ N ++ L G F L L + L + +V DA L +L L L GN
Sbjct: 146 PALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSL-AVLPDAAFRGLGSLRELVLAGN 204
Query: 188 RLKHLSESVFFPTPNLKTLSLDGN 211
RL +L ++F L+ L L N
Sbjct: 205 RLAYLQPALFSGLAELRELDLSRN 228
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L+ N I+ + AF +GL L+ + L ++ + + DTF L L + LS N
Sbjct: 244 LQKLYLDRNLIAAVAPGAF--LGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNA 301
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
IA L TF L+ L L N I +L F L L+ + L H Q+ V A + L
Sbjct: 302 IASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGL 361
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
T + +NL+GN L++L E VF L +L L+G+
Sbjct: 362 TNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGS 396
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 47/152 (30%), Positives = 79/152 (51%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
LDL++N+++ L ++ F GLL L+ + L ++ I + TFK L L E+ L N+I
Sbjct: 271 LDLSHNRVAGLLEDTFP--GLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L + +F G +L+VL L+ N + E++AG F L + + L + ++ + L L
Sbjct: 329 LAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKL 388
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
SL+L G+ L + F L+ L L N
Sbjct: 389 HSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 43/155 (27%), Positives = 78/155 (50%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
++ L L +N+I L + +F+ +G L + + L ++ ++EV F LT + ++LS N
Sbjct: 316 LEELQLGHNRIRQLAERSFEGLGQLEV--LTLDHNQLQEVKAGAFLGLTNVAVMNLSGNC 373
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ L + F G +L L+L G+ + +R F L L+ + L+ + + + +L L
Sbjct: 374 LRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGL 433
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+L N+L HL +F L+ L L N
Sbjct: 434 AELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRN 468
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/152 (30%), Positives = 77/152 (50%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L+NN++S L F+ +G +L + L + + + F+ L L E+ L+ N++A+
Sbjct: 151 LGLSNNRLSRLEDGLFEGLG--SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAY 208
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L F G L+ L L+ N + ++A F +LP L+ + L I +V A + L AL
Sbjct: 209 LQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKAL 268
Query: 180 ESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L+L+ NR+ L E F L+ L L N
Sbjct: 269 RWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 300
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 48/170 (28%), Positives = 78/170 (45%)
Query: 42 KDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTF 101
+D F L S D L+L N ++ L AF+ +G +L+ + L + + + F
Sbjct: 162 EDGLFEGLGSLWD-----LNLGWNSLAVLPDAAFRGLG--SLRELVLAGNRLAYLQPALF 214
Query: 102 KYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQ 161
L L E+DLS N + + + F+ RL+ LYL+ N I + G F L L+ ++L
Sbjct: 215 SGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLS 274
Query: 162 HCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
H ++ + +D L L L L+ N + L F L+ L L N
Sbjct: 275 HNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHN 324
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/157 (27%), Positives = 77/157 (49%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
+++ V++L+ N + L ++ F+ +G L ++L+ S + + TF L+ L + L D
Sbjct: 362 TNVAVMNLSGNCLRNLPEQVFRGLG--KLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKD 419
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
N + + + + G L L L N +T L F L L+ + L ++ + DAL
Sbjct: 420 NGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALG 479
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L+++ NRL+ L S+ P L+ LSL N
Sbjct: 480 PLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNN 516
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 35 GKKSALCKDAN-FTALPSTLD---SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKN 90
G AL D N +++P S + L+L ++ L +A +GL NL ++L+
Sbjct: 74 GGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQAL--LGLENLCHLHLER 131
Query: 91 SGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFP 150
+ +R + TF + L + LS+N+++ L F G L L L N + L F
Sbjct: 132 NQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFR 191
Query: 151 KLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDG 210
L L+ + L ++ + L L L+L+ N L+ + +VF P L+ L LD
Sbjct: 192 GLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDR 251
Query: 211 N 211
N
Sbjct: 252 N 252
>ZFIN|ZDB-GENE-110408-27 [details] [associations]
symbol:rxfp2a "relaxin/insulin-like family peptide
receptor 2a" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
ZFIN:ZDB-GENE-110408-27 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
GeneTree:ENSGT00650000093266 EMBL:CR536612 IPI:IPI00485356
Ensembl:ENSDART00000149137 Bgee:F8W5N7 Uniprot:F8W5N7
Length = 750
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 62/196 (31%), Positives = 92/196 (46%)
Query: 22 TDC-----PDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFK 76
TDC PD CRC T C A+ ++P + +++ L L +NKI L EAF
Sbjct: 98 TDCQVEQYPDVCRCINT----EIHCVHASLRSIPQ-VSANVTSLSLKSNKIRTLPDEAF- 151
Query: 77 SIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYL 136
I + LQR++L+++ I V F L L ++ LS N I+ L F +LK L L
Sbjct: 152 -IKYIKLQRLFLQDNCINTVSIQAFSGLYKLQKLSLSQNSISLLSPGVFRDLRKLKWLIL 210
Query: 137 NGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI-HLTALESLNLNGNRLKHLSES 195
+ NPIT + A F L L + + + + ++ L H+ L L+ GN + L S
Sbjct: 211 DDNPITTIAANTFAGLSSLFFLSMVNTSLEALPSARLCAHMPFLSWLDFEGNSITTLGLS 270
Query: 196 VFFPTPNLKTLSLDGN 211
+L LSL N
Sbjct: 271 TLLDCEHLTVLSLRAN 286
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 56/188 (29%), Positives = 84/188 (44%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP C C + + C+ A+P +D Q+LDL N + + AF+ +G L
Sbjct: 389 CPRACVC--VPESRHSGCEARGLRAVPRGFPNDTQLLDLRRNHFPLVPRAAFQGLG--RL 444
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
++L++ GI E+ L L+ + LSDN ++ L G RL LYL N +
Sbjct: 445 VSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQ 504
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
+ LP L ++ LQ + + L AL L L+GNRL +S P L
Sbjct: 505 VPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQEL 564
Query: 204 KTLSLDGN 211
+ L LD N
Sbjct: 565 EKLHLDRN 572
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/188 (29%), Positives = 87/188 (46%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP TC C + ++ C+ N T +P+ + Q LDL N + + AF+ + L
Sbjct: 30 CPQTCICDNS--RRHVACRHQNLTEVPNAIPELTQRLDLRGNVLRVIPPAAFQDLPYLT- 86
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
+ L++ + V F+ L L+ ++L+ N+++ L Q+ G L+ L L GN + E
Sbjct: 87 -HLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEE 145
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
LR G F L L T+ L H + + A L L L+ N L L+ P L
Sbjct: 146 LRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPAL 205
Query: 204 KTLSLDGN 211
+ LSL N
Sbjct: 206 RRLSLHHN 213
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 53/196 (27%), Positives = 88/196 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+ L+L +N + YL AF+ GL+ + + L ++ + + + L L + L N+
Sbjct: 157 LATLNLAHNALVYLPPMAFQ--GLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNE 214
Query: 117 IAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIH 175
+ L L R L L L NP T LP L+ + L+H + ++ A H
Sbjct: 215 LQSL-PGLALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAH 273
Query: 176 LTALESLNLNGNRLKHLSESVFFPT-PN-LKTLSLDGNPWCCDCHLRSFRNWLLKSKLYS 233
L +L+L GN+L +++ P P L+ L L GNP C C R WL ++++ S
Sbjct: 274 CPRLHTLDLRGNQL----DALLPPQGPGQLRRLQLQGNPLWCGCRARPLLEWLARARVRS 329
Query: 234 HPLSCTEPGMLQTKHW 249
+C P + W
Sbjct: 330 DG-ACWGPRPCAARPW 344
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/151 (28%), Positives = 74/151 (49%)
Query: 59 VLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIA 118
+L+L +N++S L +EA +G +L+R+ L+ + + E+ TF L L ++L+ N +
Sbjct: 111 LLNLASNRLSALPQEALDGLG--SLRRLELEGNLLEELRPGTFGALGALATLNLAHNALV 168
Query: 119 WLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTA 178
+L F G R + L L+ N ++ L LP L+ + L H ++ S+ AL
Sbjct: 169 YLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARG 228
Query: 179 LESLNLNGNRLKHLSESVFFPTPNLKTLSLD 209
L L L N + E P L+ L L+
Sbjct: 229 LARLELGHNPFTYAGEEDGLALPGLRELRLE 259
Score = 142 (55.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/153 (30%), Positives = 73/153 (47%)
Query: 60 LDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAW 119
L L++N +S L+ A + G L +YL+ + +V L L + L DN +
Sbjct: 471 LYLSDNGLSGLSATALE--GAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDR 528
Query: 120 LHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTAL 179
L G L+ LYL+GN +T++ G L+ + L Q+ V +AL L AL
Sbjct: 529 LAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPAL 588
Query: 180 ESLNLNGNRLKHLSESVFFPTP-NLKTLSLDGN 211
L L+GN L+ L E F P +L+ L L+ +
Sbjct: 589 LELQLSGNPLRALQEGAFRPVGRSLQHLFLNSS 621
Score = 130 (50.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 51/183 (27%), Positives = 76/183 (41%)
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L+ +YL + + +V L ++ L NQ+ + + G L L L+GNP+
Sbjct: 540 LRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLR 599
Query: 143 ELRAGQF-PKLPYLKTIELQHCQIHSVHKDALIHL-TALESLNLNGNRLKHLSESVFFPT 200
L+ G F P L+ + L + + A L L+SL L N+L+ L P
Sbjct: 600 ALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALP-----PL 654
Query: 201 PNLKTLSL---DGNPWCCDCHLRSFRNWLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEF 257
P L+ L L GNP+ CDC L WL L +C P + + A
Sbjct: 655 PGLRQLELIDLSGNPFHCDCQLLPLHRWLTGLNLRVGA-TCATPPSARGQRVKAAAAVFD 713
Query: 258 ACP 260
ACP
Sbjct: 714 ACP 716
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 194 (73.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 56/215 (26%), Positives = 103/215 (47%)
Query: 48 ALPSTLDSDIQVLDLNNNKISYLTK---EAFKSIGLLNLQRIYLKNSGIREVHRDTFKYL 104
A P + +D +N K+S + + + L N + L+ +GI FK L
Sbjct: 18 ACPEKCRCEGTTVDCSNQKLSKIPDHIPQYTAELRLNNNEFTVLEATGI-------FKKL 70
Query: 105 TILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQ 164
L +++ S+N+I + + F G + + L N + ++ F L LKT++++ +
Sbjct: 71 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNR 130
Query: 165 IHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRN 224
I V D+ I L+++ L+L N++ ++ F +L TL+L NP+ C+C+L
Sbjct: 131 ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGE 190
Query: 225 WLLKSKLYSHPLSCTEPGMLQTKHWDDVKAQEFAC 259
WL K ++ + C +P L+ DV Q+F C
Sbjct: 191 WLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTC 225
Score = 141 (54.7 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 49/192 (25%), Positives = 84/192 (43%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA-FKSIGLLN 82
CP+ CRC+ T + C + + +P + L LNNN+ + L FK L
Sbjct: 19 CPEKCRCEGT----TVDCSNQKLSKIPDHIPQYTAELRLNNNEFTVLEATGIFKK--LPQ 72
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
L++I N+ I ++ F+ + + E+ L+ N++ + F G + LK L + N I+
Sbjct: 73 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRIS 132
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+ F L ++ + L QI ++ A L +L +LNL N +
Sbjct: 133 CVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWL 192
Query: 203 LKTLSLDGNPWC 214
K + GNP C
Sbjct: 193 RKKRIVTGNPRC 204
Score = 138 (53.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/164 (26%), Positives = 79/164 (48%)
Query: 107 LVEVDLSDNQIAWLHQDTFLGNDR-LKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
+ E+ L NQ + ++ L N + L ++ L+ N I+ L F + L T+ L + ++
Sbjct: 269 VTELYLDGNQFTLVPKE--LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 326
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNW 225
+ L +L L+L+GN + + E F L L++ NP CDC+++ +W
Sbjct: 327 RCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 386
Query: 226 LLKSKLYSHP--LSCTEPGMLQTKHWDDVKAQEFAC--PPNVTI 265
+ KS+ Y P C PG + K +++F C P +V+I
Sbjct: 387 V-KSE-YKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVSI 428
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEA--FKSIGLL 81
CP C C T+ + C + LP + D+ L L+ N+ + + KE +K + L+
Sbjct: 240 CPTECTCLDTVVR----CSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLI 295
Query: 82 NLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPI 141
+L N+ I + +F +T L+ + LS N++ L TF G L++L L+GN I
Sbjct: 296 DLS-----NNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRLLSLHGNDI 350
Query: 142 TELRAGQFPKLPYLKTIEL 160
+ + G F L L + +
Sbjct: 351 SVVPEGAFNDLSALSHLAI 369
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 190 (71.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/205 (28%), Positives = 106/205 (51%)
Query: 40 LCKDANFTAL-PSTLDS--DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREV 96
+ D++ +A+ P T + ++ L L NKIS+L + + LL ++++L ++ +R++
Sbjct: 80 MLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLL--EQLFLDHNALRDL 137
Query: 97 HRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLK 156
++ F+ L L ++ L+ NQ+++L + F +LKVL L+ N +T L G L+
Sbjct: 138 DQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLE 197
Query: 157 TIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN----- 211
+ L ++ S+ L +L AL L L N L+ ++ F NL TL+L GN
Sbjct: 198 KLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESL 257
Query: 212 PWCCDCHLRSFRNWLLKSKLYSHPL 236
P H+ +WL + L+ +PL
Sbjct: 258 PPALFLHV----SWLTRLTLFENPL 278
Score = 186 (70.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 64/237 (27%), Positives = 107/237 (45%)
Query: 33 TLGKKSALCKDANFT-ALPSTLD---SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYL 88
+LG S L N +LP L S + L L N + L + F + L+ ++L
Sbjct: 240 SLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMA--GLRELWL 297
Query: 89 KNSGIREVHRDTFKYLTILVEVDLSDNQI-AWLHQDTFLGNDRLKVLYLNGNPITELRAG 147
+ +R + F+ L+ L + L+ N + + L F G L+VL ++ N + EL
Sbjct: 298 NGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPED 357
Query: 148 QFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLS 207
L L+ + L+H ++ ++ + +L++L ++ L N+LK L VF P L +
Sbjct: 358 ALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVL 417
Query: 208 LDGNPWCCDCHLRSFRNWL---LKSKLYSHPLSCTEP-GMLQTKHWDDVKAQEFACP 260
L NPW CDC L F WL L+ P C P W+ ++ ++ CP
Sbjct: 418 LGHNPWLCDCGLWPFLQWLRHHLELLGRDEPPQCNGPESRASLTFWELLQGDQW-CP 473
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 78 IGL-LNLQRIYL--KNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVL 134
+GL NL I L + G+ + H +F +T+L + LSD+ I+ + TF +LK L
Sbjct: 46 LGLPTNLTHILLFRMDRGVLQSH--SFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTL 103
Query: 135 YLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSE 194
L N I+ L K+ L+ + L H + + ++ L L L LN N+L L
Sbjct: 104 RLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPA 163
Query: 195 SVFFPTPNLKTLSLDGNPWC-CDCHLRSFRNWLLKSKLYSHPLSCTEPGML 244
++F LK L L N L + L K LYS+ L + G+L
Sbjct: 164 NLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLL 214
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 40 LCKDAN-FTALPSTLDSDI---QVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIRE 95
LC + N + LP+ L S + +VLDL+ N +++L + + + L+++ L ++ +
Sbjct: 151 LCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGA--QIKLEKLLLYSNRLMS 208
Query: 96 VHRDTFKYLTILVEVDLSDNQIAWLHQDTF--LGNDRLKVLYLNGNPITELRAGQFPKLP 153
+ L L E+ L N + + F LGN L L L+GN + L F +
Sbjct: 209 LDSGLLANLGALTELRLERNHLRSIAPGAFDSLGN--LSTLTLSGNLLESLPPALFLHVS 266
Query: 154 YLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNP 212
+L + L + + + + L L LNG L+ L + F L+TL L NP
Sbjct: 267 WLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNP 325
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 55/221 (24%), Positives = 95/221 (42%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPST-LDSDIQVLDLNNNKISYLTKEAFKSIGLLN 82
CP TC+C + + + C + + L +++ + L L +F G+
Sbjct: 21 CPKTCKC---VVRDAVQCSGGSVAHIAELGLPTNLTHILLFRMDRGVLQSHSFS--GMTV 75
Query: 83 LQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPIT 142
LQR+ L +S I + TF L L + L+ N+I+ L + L+ L+L+ N +
Sbjct: 76 LQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALR 135
Query: 143 ELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPN 202
+L F KL L+ + L Q+ + + L L+ L+L+ N L HL + +
Sbjct: 136 DLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIK 195
Query: 203 LKTLSLDGNP-WCCDCHLRSFRNWLLKSKLYSHPLSCTEPG 242
L+ L L N D L + L + +L + L PG
Sbjct: 196 LEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPG 236
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/166 (33%), Positives = 91/166 (54%)
Query: 49 LPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLT 105
LP+T + ++Q LDL+ N++S L E F GL LQ ++L+++ +R + F
Sbjct: 124 LPNTTFTQLINLQNLDLSFNQLSSLHPELF--YGLRKLQTLHLRSNSLRTIPVRLFWDCR 181
Query: 106 ILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
L +DLS N++ L ++ F G +L+ L+L N +T++ F +L L T+ LQ +I
Sbjct: 182 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 241
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++ + LE L+L GN +K + +VF PNLK L +D N
Sbjct: 242 SNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNN 287
Score = 178 (67.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 56/188 (29%), Positives = 90/188 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC+ K C F ++P+ D L L +N I+ L ++ F S L
Sbjct: 34 CPPKCRCE----KLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERDQFASFSQLTW 89
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
++L ++ I V D F+ L L E+ LS N+I +L TF L+ L L+ N ++
Sbjct: 90 --LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSS 147
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L F L L+T+ L+ + ++ +LE L+L+ NRL+ L+ + F L
Sbjct: 148 LHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKL 207
Query: 204 KTLSLDGN 211
+ L L+ N
Sbjct: 208 RELHLEHN 215
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/157 (29%), Positives = 82/157 (52%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S + L L++N+IS + ++AF+ GL L+ + L ++ I + TF L L +DLS
Sbjct: 85 SQLTWLHLDHNQISTVKEDAFQ--GLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSF 142
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
NQ++ LH + F G +L+ L+L N + + F L+ ++L ++ S+ ++
Sbjct: 143 NQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFA 202
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L L+L N+L ++ + F +L TL L N
Sbjct: 203 GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 239
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/190 (24%), Positives = 83/190 (43%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L +N + + F +L+ + L + +R + R+ F L L E+ L NQ
Sbjct: 159 LQTLHLRSNSLRTIPVRLFWDCR--SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQ 216
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ ++ FL L L+L N I+ L G L+ ++L +I ++ +
Sbjct: 217 LTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETM 276
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSK-LYSHP 235
L+ L ++ N+L L + +L T+ L GN W C + + +WL + + H
Sbjct: 277 PNLKILLMDNNKLNSLDSKILSSLRSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHS 336
Query: 236 LSCTEPGMLQ 245
+ C P Q
Sbjct: 337 ILCHSPDHTQ 346
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 57/166 (34%), Positives = 90/166 (54%)
Query: 49 LPSTLDS---DIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLT 105
LP+T S ++Q LDL+ N++S L E GL LQ ++L+++ +R + F
Sbjct: 129 LPNTTFSQLLNLQNLDLSFNQLSSLHPELL--YGLRKLQTLHLRSNSLRTIPVRLFWDCR 186
Query: 106 ILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQI 165
L +DLS N++ L ++ F G +L+ L+L N +T++ F +L L T+ LQ +I
Sbjct: 187 SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKI 246
Query: 166 HSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
++ LE L+L GN +K + +VF PNLKTL LD N
Sbjct: 247 SNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNN 292
Score = 167 (63.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 55/188 (29%), Positives = 90/188 (47%)
Query: 24 CPDTCRCKWTLGKKSALCKDANFTALPSTLDSDIQVLDLNNNKISYLTKEAFKSIGLLNL 83
CP CRC+ K C F ++P+T + L L +N I+ L ++ F S L
Sbjct: 39 CPPKCRCE----KLLFYCDSQGFHSVPNTTEKGSLGLSLRHNFITELERDQFASFSQLTW 94
Query: 84 QRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQIAWLHQDTFLGNDRLKVLYLNGNPITE 143
++L ++ I V D+F+ L L E+ LS N+I L TF L+ L L+ N ++
Sbjct: 95 --LHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSS 152
Query: 144 LRAGQFPKLPYLKTIELQHCQIHSVHKDALIHLTALESLNLNGNRLKHLSESVFFPTPNL 203
L L L+T+ L+ + ++ +LE L+L+ NRL+ L+ + F L
Sbjct: 153 LHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKL 212
Query: 204 KTLSLDGN 211
+ L L+ N
Sbjct: 213 RELHLEHN 220
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/190 (25%), Positives = 84/190 (44%)
Query: 57 IQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSDNQ 116
+Q L L +N + + F +L+ + L + +R + R+ F L L E+ L NQ
Sbjct: 164 LQTLHLRSNSLRTIPVRLFWDCR--SLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQ 221
Query: 117 IAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALIHL 176
+ ++ FL L L+L N I+ L G L+ ++L I ++ +
Sbjct: 222 LTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETM 281
Query: 177 TALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGNPWCCDCHLRSFRNWLLKSK-LYSHP 235
L++L L+ N+L L + P+L T+ L GN W C + + WL + + HP
Sbjct: 282 PNLKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGNLWECSARICALAAWLGAFRGRWEHP 341
Query: 236 LSCTEPGMLQ 245
+ C P Q
Sbjct: 342 ILCHGPDHAQ 351
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/157 (27%), Positives = 81/157 (51%)
Query: 55 SDIQVLDLNNNKISYLTKEAFKSIGLLNLQRIYLKNSGIREVHRDTFKYLTILVEVDLSD 114
S + L L++N+I+ + +++F+ GL L+ + L ++ I + TF L L +DLS
Sbjct: 90 SQLTWLHLDHNQIATVREDSFQ--GLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSF 147
Query: 115 NQIAWLHQDTFLGNDRLKVLYLNGNPITELRAGQFPKLPYLKTIELQHCQIHSVHKDALI 174
NQ++ LH + G +L+ L+L N + + F L+ ++L ++ S+ ++
Sbjct: 148 NQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFA 207
Query: 175 HLTALESLNLNGNRLKHLSESVFFPTPNLKTLSLDGN 211
L L L+L N+L ++ + F +L TL L N
Sbjct: 208 GLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWN 244
WARNING: HSPs involving 524 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 610 547 0.00096 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 774
No. of states in DFA: 624 (66 KB)
Total size of DFA: 339 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.28u 0.12s 48.40t Elapsed: 00:00:06
Total cpu time: 48.42u 0.13s 48.55t Elapsed: 00:00:06
Start: Thu Aug 15 16:49:41 2013 End: Thu Aug 15 16:49:47 2013
WARNINGS ISSUED: 2