Query psy10489
Match_columns 147
No_of_seqs 84 out of 86
Neff 4.5
Searched_HMMs 13730
Date Fri Aug 16 19:28:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10489.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10489hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xqra1 a.118.1.21 (A:87-350) 65.2 3.8 0.00027 29.3 4.5 60 59-120 56-115 (264)
2 d1xqra1 a.118.1.21 (A:87-350) 60.6 5.4 0.00039 28.4 4.6 59 59-120 142-200 (264)
3 d1xm9a1 a.118.1.24 (A:244-700) 39.8 17 0.0012 25.5 4.3 59 59-120 42-100 (457)
4 d1xm9a1 a.118.1.24 (A:244-700) 37.7 24 0.0018 24.6 4.9 59 81-143 394-453 (457)
5 d1jova_ b.30.5.7 (A:) Hypothet 33.3 13 0.00096 27.3 2.9 20 60-79 70-89 (269)
6 d1x3zb1 a.189.1.1 (B:253-309) 24.2 32 0.0024 20.6 3.0 40 59-117 17-56 (57)
7 d1jdha_ a.118.1.1 (A:) beta-Ca 16.0 74 0.0054 23.8 4.3 58 59-119 99-156 (529)
8 d1jdha_ a.118.1.1 (A:) beta-Ca 14.2 1E+02 0.0073 23.0 4.6 62 59-123 141-202 (529)
9 d1n4ka1 a.118.22.1 (A:436-602) 13.1 1.2E+02 0.0085 21.3 4.4 45 81-130 118-162 (167)
10 d1wa5b_ a.118.1.1 (B:) Karyoph 11.4 1.1E+02 0.0081 22.6 4.0 56 59-117 160-215 (503)
No 1
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.23 E-value=3.8 Score=29.34 Aligned_cols=60 Identities=7% Similarity=0.104 Sum_probs=42.3
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcCc
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSR 120 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs~ 120 (147)
.+||+..+...+ ++.+.......-...|.++.++++.+|+.+....|+..+--+|++.+.
T Consensus 56 ~~gg~~~ll~~l--l~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~ 115 (264)
T d1xqra1 56 QLSGMHLLVGRY--LEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDAC 115 (264)
T ss_dssp HTTHHHHHHHTT--TTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSC
T ss_pred HcCCHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCC
Confidence 789987765422 222222235566677788889999999999999988888778876543
No 2
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.65 E-value=5.4 Score=28.44 Aligned_cols=59 Identities=7% Similarity=-0.048 Sum_probs=45.5
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcCc
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSR 120 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs~ 120 (147)
..||+.+|.+++..=+ +.........|.+++.+++.+++.+....++..+--+|+.-++
T Consensus 142 ~~~gi~~L~~lL~~~~---~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~~ 200 (264)
T d1xqra1 142 RLDGFSVLMRAMQQQV---QKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHS 200 (264)
T ss_dssp HTTHHHHHHHHHHSSC---HHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCS
T ss_pred HhhhhhHHHHHHhcCc---hHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCCCH
Confidence 6889998888875322 2224556778888999999999999999999999888866443
No 3
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.78 E-value=17 Score=25.45 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=41.3
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcCc
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSR 120 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs~ 120 (147)
..|||..|.-|+. .+.+..-..-+..|.++..+++.+|+.+....|...+-.++.+...
T Consensus 42 ~~g~i~~Lv~lL~---~~~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g~v~~li~~l~~~~~ 100 (457)
T d1xm9a1 42 QLGGICKLVDLLR---SPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGN 100 (457)
T ss_dssp HTTHHHHHHHHTT---SSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCC
T ss_pred HCCcHHHHHHHHC---CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCChHHHHHHHhccCc
Confidence 6788777766653 3332223345566777888999999999999999888777765443
No 4
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.68 E-value=24 Score=24.57 Aligned_cols=59 Identities=10% Similarity=0.014 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcCccccchhhhhh-hhhhhccCCCCCC
Q psy10489 81 LSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLIAGHSRS-DSLNVCGEKKSDF 143 (147)
Q Consensus 81 ~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs~~hLt~~vL~a-~~l~~~~~~~~~~ 143 (147)
....+..+.++..+++.+++.+....|+..|=.+++.-+.. .+..+ -.++.-+..+++.
T Consensus 394 ~~~a~~~L~~l~~~~~~~~~~l~~~g~i~~L~~l~~~~~~~----~~~~aA~~~L~~L~~~~~~ 453 (457)
T d1xm9a1 394 LSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASP----KAAEAARLLLSDMWSSKEL 453 (457)
T ss_dssp HHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCH----HHHHHHHHHHHTTSSSTTC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCCCCH----HHHHHHHHHHHHHHcCHhh
Confidence 34566778888889999999999999998887777654332 23333 5556655555554
No 5
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]}
Probab=33.28 E-value=13 Score=27.31 Aligned_cols=20 Identities=5% Similarity=0.016 Sum_probs=16.8
Q ss_pred ccccchhhHhhhhhcccCCC
Q psy10489 60 TREICVIEAVWTCQSTSMDG 79 (147)
Q Consensus 60 IGGI~VLfPLf~Qld~~~d~ 79 (147)
=|||-++||.|.....++.|
T Consensus 70 RGGiPi~fP~fG~~~~p~HG 89 (269)
T d1jova_ 70 RGGVPICYPWFGGVKQPAHG 89 (269)
T ss_dssp SBSCCEEBSSCGGGSSSTTB
T ss_pred cCCcceeCcccCCCCCCCCc
Confidence 39999999999998877643
No 6
>d1x3zb1 a.189.1.1 (B:253-309) Rad23 STI1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.19 E-value=32 Score=20.58 Aligned_cols=40 Identities=15% Similarity=0.215 Sum_probs=24.0
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhh
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQK 117 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqk 117 (147)
.-|--..|-|||+-+. .+-|..+|||++.--. .|+.||+-
T Consensus 17 vsg~peal~plle~ls------------------~ryp~lre~im~npe~-fismllea 56 (57)
T d1x3zb1 17 VSGNPEALAPLLENIS------------------ARYPQLREHIMANPEV-FVSMLLEA 56 (57)
T ss_dssp HHHCGGGHHHHHHHHH------------------TTCHHHHHHHHTCHHH-HHHHHHHC
T ss_pred hcCChHHHHHHHHHHH------------------HhhHHHHHHHHhCHHH-HHHHHHhh
Confidence 3466677788888776 3446666666655433 24666653
No 7
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.00 E-value=74 Score=23.78 Aligned_cols=58 Identities=12% Similarity=0.145 Sum_probs=41.0
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcC
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLS 119 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs 119 (147)
-.||+..|..++. .+.+.....-...+.++...++..|+.+....|...+-.+|++-+
T Consensus 99 ~~g~i~~Li~lL~---~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~ 156 (529)
T d1jdha_ 99 KSGGIPALVKMLG---SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN 156 (529)
T ss_dssp HTTHHHHHHHHTT---CSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCC
T ss_pred HCCCHHHHHHHhC---CCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccC
Confidence 3477777666653 333223445567778888899999999999999888877776544
No 8
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.24 E-value=1e+02 Score=22.96 Aligned_cols=62 Identities=15% Similarity=0.093 Sum_probs=41.3
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcCcccc
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 123 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs~~hL 123 (147)
.-|||+.|..++. .+...........+..+...+..++..+....|+..+-.+|+..+...+
T Consensus 141 ~~g~i~~Lv~lL~---~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~ 202 (529)
T d1jdha_ 141 LAGGLQKMVALLN---KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKL 202 (529)
T ss_dssp HHTHHHHHHHGGG---CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHH
T ss_pred hcCCchHHHHHHH---ccChHHHHHHHHHHHHHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHH
Confidence 5688887777763 2221122233334556667888899999999999999999987665433
No 9
>d1n4ka1 a.118.22.1 (A:436-602) IP3 receptor type 1 binding core, domain 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.10 E-value=1.2e+02 Score=21.29 Aligned_cols=45 Identities=9% Similarity=0.106 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhhcCccccchhhhhh
Q psy10489 81 LSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLIAGHSRS 130 (147)
Q Consensus 81 ~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqkvs~~hLt~~vL~a 130 (147)
+-.-..+|..+..++..||+.+.+ -+++++......-+..+++.+
T Consensus 118 ~rlcy~~L~~~c~~n~~NQ~~l~k-----~i~~f~~qi~~~~~a~~ti~~ 162 (167)
T d1n4ka1 118 CRLCYRVLRHSQQDYRKNQEYIAK-----QFGFMQKQIGYDVLAEDTITA 162 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH-----HHHHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHH-----HHHHHHHHhCCCccHHHHHHH
Confidence 444566677788999999999987 467777766655444444443
No 10
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.37 E-value=1.1e+02 Score=22.59 Aligned_cols=56 Identities=5% Similarity=0.017 Sum_probs=38.5
Q ss_pred cccccchhhHhhhhhcccCCCcHHHHHHHHHHHHhhChhHHHHHHhhccHHHHHHHHhh
Q psy10489 59 STREICVIEAVWTCQSTSMDGRLSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQK 117 (147)
Q Consensus 59 ~IGGI~VLfPLf~Qld~~~d~s~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iig~LLqk 117 (147)
--|++..+..++.. +.+......+..+.++...++.+++.++.+.|+..+-.+++.
T Consensus 160 ~~g~i~~l~~lL~s---~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~ 215 (503)
T d1wa5b_ 160 DADAVPLFIQLLYT---GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNS 215 (503)
T ss_dssp HTTCHHHHHHHHHH---CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGS
T ss_pred hCCChHHHHHHhcC---CChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhccc
Confidence 45677766666542 222223455667788888899999999999888877666654
Done!