RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10493
         (226 letters)



>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
          esterase) {Cow (Bos taurus) [TaxId: 9913]}
          Length = 579

 Score = 26.9 bits (58), Expect = 2.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 42 PRALSPPLTQNNNQGHEDCL 61
           R L   LTQ++  G+EDCL
Sbjct: 62 KRCLQATLTQDSTYGNEDCL 81


>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel
          {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 109

 Score = 25.1 bits (55), Expect = 4.5
 Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)

Query: 13 QFLSLA-VVYFISVLMVSKYRDILEPPPMLP 42
           F  +A  VYF+ VL  +  R   E      
Sbjct: 69 NFFLIAFAVYFLVVLPYNTLRKKGEVEQPGD 99


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0663    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 792,663
Number of extensions: 34090
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 5
Length of query: 226
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 144
Effective length of database: 1,281,736
Effective search space: 184569984
Effective search space used: 184569984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (23.6 bits)