RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10504
(286 letters)
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 141 bits (357), Expect = 1e-42
Identities = 123/167 (73%), Positives = 147/167 (88%), Gaps = 1/167 (0%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAG 161
MRE+KVVVLGSGGVGKSALTVQFV+G F+EKYDPTIEDFYRKEIEVD +P VLEILDTAG
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Query: 162 TEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL 221
TEQFASMRDLYIKNGQGF++VYSL N +FQDIK M++ I RVK E+VP++LV NK+DL
Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL 120
Query: 222 ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNF 268
+REV + +G+ALA+ WGCPF+E SAK+KT V+E+FAEIVR+MN+
Sbjct: 121 -ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMNY 166
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 138 bits (348), Expect = 3e-41
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTAGTE 163
FK++++G GVGK+ + +F F + TI DF + IE+D L+I DTAG E
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F ++ Y + G ++VY +TN +F +I+ I ++ ++L +
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV--N 124
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNPEK 272
+R+V G+ LA +G F+E SAK NV F + R++ +K
Sbjct: 125 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 173
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 132 bits (332), Expect = 6e-39
Identities = 61/163 (37%), Positives = 93/163 (57%), Gaps = 4/163 (2%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTAGTE 163
K++++G GVGKS L V+FV F + TI DF K ++++ L+I DTAG E
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F ++ Y + G ++VY +T+ TF +IKQ + ++ +LLV NK D+
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFK-TVNEHANDEAQLLLVGNKSDM-- 119
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
R V G+ALA+ G PFIE+SAKN NVNE+F + + +
Sbjct: 120 ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 162
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 129 bits (324), Expect = 1e-37
Identities = 50/163 (30%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDKAPCVLEILDTAGTE 163
FK+V++G+ GVGK+ L +F G F TI DF K +E++ L+I DTAG E
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F S+ Y ++ ++ Y +T +F+ + + I + S +V +LV NK+DL +
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYA-SNKVITVLVGNKIDL-A 123
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+REV + +++ ++E SAK NV ++F ++ +
Sbjct: 124 ERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 128 bits (322), Expect = 3e-37
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTA 160
+ K++++G GVGKS+L ++F F + TI DF K I VD L I DTA
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
Query: 161 GTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLD 220
G E+F ++ Y + QG ++VY +T TF + + + +LV NK+D
Sbjct: 65 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID 124
Query: 221 LASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNP 270
REV +G A+ FIEASAK V F E+V ++ P
Sbjct: 125 --KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTP 172
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 126 bits (316), Expect = 1e-36
Identities = 100/166 (60%), Positives = 126/166 (75%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAG 161
MRE+K+VVLGSGGVGKSALTVQFV G F+EKYDPTIED YRK++EVD C+LEILDTAG
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60
Query: 162 TEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL 221
TEQF +MRDLY+KNGQGF +VYS+T TF D++ ++E I RVK +E VP++LV NK DL
Sbjct: 61 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL 120
Query: 222 ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMN 267
+ Q C F+E+SAK+K NVNE+F ++VR++N
Sbjct: 121 EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQIN 166
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 125 bits (315), Expect = 2e-36
Identities = 81/165 (49%), Positives = 120/165 (72%), Gaps = 2/165 (1%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAG 161
M E+K+VV+G+GGVGKSALT+Q + F+++YDPTIED YRK++ +D C+L+ILDTAG
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Query: 162 TEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL 221
E++++MRD Y++ G+GF+ V+++ N +F+DI Q +E I RVK S+ VP++LV NK D
Sbjct: 61 QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD- 119
Query: 222 ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
R V + Q LA+S+G P+IE SAK + V + F +VRE+
Sbjct: 120 -LAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 126 bits (317), Expect = 3e-36
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIED-FYRKEIEVDKAPCVLEILDTAGTE 163
FK++++G+ GVGKS L ++F + Y TI F K +E+D L+I DTAG E
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F ++ Y + G ++VY +T+ +F +K + I R + V LLV NK
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA-TSTVLKLLVGNK-CDLK 124
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNPEKDN 274
+R V + A + PF+E SA + TNV + F + R++ + + N
Sbjct: 125 DKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQN 175
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 122 bits (306), Expect = 6e-35
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIED-FYRKEIEVDKAPCVLEILDTAGTE 163
FKVV++G GVGKS L +F F + TI F + I+VD +I DTAG E
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
++ + Y + G ++VY + H T++++++ + + R + I+LV NK D
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKEL-RDHADSNIVIMLVGNKSD-LR 122
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
H R VPT + +A A+ FIE SA + TNV E F I+ E+
Sbjct: 123 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 165
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 122 bits (306), Expect = 9e-35
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYR-----------KEIEVDKAPCV 153
K++ LG GVGK+ ++ F K+ T+ +R
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 154 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPIL 213
L++ DTAG E+F S+ + ++ GF++++ LT+ +F +++ + E I+
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 125
Query: 214 LVANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
L+ NK DL QREV + LA +G P+ E SA NV + ++ +
Sbjct: 126 LIGNKADL-PDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 177
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 121 bits (303), Expect = 1e-34
Identities = 71/166 (42%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Query: 101 TMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTA 160
++ KV+++GSGGVGKSALT+QF+ F+E Y+PT D YRK++ +D ++ILDTA
Sbjct: 1 SLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTA 60
Query: 161 GTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLD 220
G E +A++RD Y ++G+GF+ V+S+T +F +E I RVK E VP LLV NK D
Sbjct: 61 GQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSD 120
Query: 221 LASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
L +R+V + + A W ++E SAK + NV+++F +++RE+
Sbjct: 121 L-EDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 165
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 121 bits (303), Expect = 2e-34
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 4/164 (2%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDP--TIEDFYRKEIEVDKAPCVLEILDTAGT 162
FKV+++G GVGK+ L V+F G F+ DF K ++VD L++ DTAG
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLA 222
E+F S+ Y ++ +++Y +TN +F +I+ I V ++L+ NK+D A
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ-HDVALMLLGNKVDSA 125
Query: 223 SHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
H+R V DG+ LA+ +G PF+E SAK NV+ F I +E+
Sbjct: 126 -HERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 168
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 120 bits (302), Expect = 2e-34
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTAGTE 163
FK +++G GVGKS L QF FM TI +F + IEV L+I DTAG E
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F ++ Y + G ++VY +T T+ + + + I+L+ NK D
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLT-NPNTVIILIGNKAD-LE 122
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
QR+V + + A+ G F+EASAK NV + F E +++
Sbjct: 123 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 116 bits (291), Expect = 7e-33
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDKAPCVLEILDTAGTE 163
FK+V LG VGK++L +F+ F Y TI DF K + ++ L++ DTAG E
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F S+ YI++ VVVY +TN ++FQ + + + +GS+ V I+LV NK DLA
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSD-VIIMLVGNKTDLA- 118
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+R+V +G+ A+ FIE SAK NV ++F + +
Sbjct: 119 DKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 115 bits (287), Expect = 3e-32
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
K+VV+G GGVGKSALT+QF+ F+ YDPTIED Y K VD P L+ILDTAG
Sbjct: 5 ETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQ 64
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLA 222
E+F +MR+ Y++ G GF++V+++ + +F ++ ++ I RVK + P++LV NK DL
Sbjct: 65 EEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADL- 123
Query: 223 SHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
QR+VP + A S + EASAK + NV+E F ++VR +
Sbjct: 124 ESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAV 167
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 115 bits (287), Expect = 4e-32
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTAGTE 163
FK +V+G+ G GKS L QF+ F + + TI +F K I V L+I DTAG E
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F S+ Y + G ++VY +T+ T+ + + S+ + I+L NK
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLA-SQNIVIILCGNK-KDLD 123
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
REV L+ AQ F+E SA NV E F + R++
Sbjct: 124 ADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 166
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 113 bits (284), Expect = 1e-31
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAG 161
M+ K VV+G G VGK+ L + + + F +Y PT+ D Y + + P L + DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 162 TEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL 221
E + +R L F+V +S+ + +F+++K+ + P LLV ++DL
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKTPFLLVGTQIDL 119
Query: 222 -----------ASHQREVPTLDGQALAQS-WGCPFIEASAKNKTNVNEMFAEIVREMNFN 269
+ Q+ + + LA+ ++E SA + + +F E +
Sbjct: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179
Query: 270 PEKDNASFC 278
PE + C
Sbjct: 180 PEPKKSRRC 188
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 113 bits (282), Expect = 2e-31
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEI-EVDKAPCVLEILDTAGTE 163
FK +++G GVGKS L +QF F +D TI + + +D L+I DTAG E
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
F S+ Y + G ++VY +T TF + E R S + I+L+ NK D
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDA-RQHSSSNMVIMLIGNKSD-LE 121
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+R+V +G+A A+ G F+E SAK NV E F +E+
Sbjct: 122 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 164
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 112 bits (281), Expect = 2e-31
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYR-KEIEVDKAPCVLEILDTAGTE 163
FK++++G+ VGK++ ++ F + T+ ++ K I + L+I DTAG E
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
++ ++ Y + GF+++Y +TN +F ++ + + +LLV NK
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWST-QIKTYSWDNAQVLLVGNK-CDME 123
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+R V + G+ LA G F EASAK+ NV + F +V +
Sbjct: 124 DERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 166
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 112 bits (279), Expect = 4e-31
Identities = 76/166 (45%), Positives = 114/166 (68%), Gaps = 2/166 (1%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAG 161
+ +K+VV+G GGVGKSALT+QF F+ YDPTIED Y K E+D +L++LDTAG
Sbjct: 2 LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG 61
Query: 162 TEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL 221
E+F++MR+ Y++ G GF++VYS+T+ +F+ + + +LI RVK E P++LVANK+DL
Sbjct: 62 QEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL 121
Query: 222 ASHQREVPTLDGQALAQSWGCPFIEASAK-NKTNVNEMFAEIVREM 266
H R+V G+ +A + P+IE SAK NV++ F ++VR +
Sbjct: 122 M-HLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVI 166
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 111 bits (277), Expect = 8e-31
Identities = 76/167 (45%), Positives = 118/167 (70%), Gaps = 2/167 (1%)
Query: 101 TMRE-FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDT 159
+M+E +++VV+G GGVGKSALT+QF+ F+ YDPTIED Y K+ +D L+ILDT
Sbjct: 1 SMQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDT 60
Query: 160 AGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL 219
AG E+F +MR+ Y++ G+GF++V+S+T+ +F++I + + I RVK + P++L+ NK
Sbjct: 61 AGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKA 120
Query: 220 DLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
DL HQR+V +GQ LA+ ++EASAK + NV++ F E+VR +
Sbjct: 121 DL-DHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVI 166
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 107 bits (268), Expect = 3e-29
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
+ K VV+G G VGK+ L + + + F +Y PT+ D Y + VD P L + DTAG
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLA 222
E + +R L ++ +SL + +F++++ PI+LV KLDL
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPE-VRHHCPNTPIILVGTKLDLR 122
Query: 223 SHQREV-----------PTLDGQALAQSWG-CPFIEASAKNKTNVNEMFAEIVREMNFNP 270
+ + G A+A+ G ++E SA + + +F E +R + P
Sbjct: 123 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 182
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 106 bits (266), Expect = 5e-29
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQ 164
K VV+G G VGK+ L + + + F E+Y PT+ D Y + V +L + DTAG E
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 165 FASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS- 223
+ +R L F++ +S+ N +FQ++K+ + + + VP LL+ ++DL
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK-EYAPNVPFLLIGTQIDLRDD 128
Query: 224 ----------HQREVPTLDGQALAQSWG-CPFIEASAKNKTNVNEMFAEIVRE 265
++ + GQ LA+ G C ++E SA + + +F E +
Sbjct: 129 PKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 105 bits (263), Expect = 1e-28
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDKAPCVLEILDTA 160
+RE KV +LG GVGKS++ +FV F +PTI F K ++ I DTA
Sbjct: 2 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 61
Query: 161 GTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLD 220
G E+F ++ +Y + ++VY +T TF +K R G + + + NK D
Sbjct: 62 GLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVR-ELRQHGPPSIVVAIAGNKCD 120
Query: 221 LASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
L + + D + A S F+E SAKN N+NE+F EI R +
Sbjct: 121 LTDVREVMER-DAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 106 bits (264), Expect = 1e-28
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 7/167 (4%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIE-VDKAPCVLEILDTAGTE 163
FKV++LG GGVGKS+L ++V+ F + TI + + VD ++I DTAG E
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITR---VKGSERVPILLVANKLD 220
+F S+R + + ++ +S+ + +FQ++ K+ VK E P +++ NK+D
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 126
Query: 221 LASHQREVPTLDGQALAQSWG-CPFIEASAKNKTNVNEMFAEIVREM 266
+ +R+V T + QA + G P+ E SAK+ TNV F E VR +
Sbjct: 127 I--SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 104 bits (260), Expect = 3e-28
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTAG 161
R FK++V+G VGK+ LT +F +G F ++ + TI DF + +++D +++ DTAG
Sbjct: 1 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 60
Query: 162 TEQF-ASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLD 220
E+F SM Y +N V VY +TN +F + E + + +P +LV NK D
Sbjct: 61 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCD 120
Query: 221 LASHQREVPTLDGQALAQSWGCPFIEASAKNKT---NVNEMFAEI 262
L +VPT Q A + P E SAKN +V +F +
Sbjct: 121 L-RSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 104 bits (260), Expect = 3e-28
Identities = 74/163 (45%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 104 EFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTE 163
+++V V G+GGVGKS+L ++FV G F E Y PT+ED YR+ I DK+ C L+I DT G+
Sbjct: 2 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSH 61
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGS-ERVPILLVANKLDLA 222
QF +M+ L I G F++VYS+T+ + +++K + E I +KG E +PI+LV NK D
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD-E 120
Query: 223 SHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVRE 265
S REV + + +ALA++W C F+E SAK NV E+F E++
Sbjct: 121 SPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNL 163
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 103 bits (258), Expect = 5e-28
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYR-KEIEVDKAPCVLEILDTAGTE 163
FKVV+LG G VGK++L +++ F +K+ T+ + K++ + L I DTAG E
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F ++ +Y ++ G ++VY +T+ +FQ +K + K L +
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNW--VKELRKMLGNEICLCIVGNKIDLE 121
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+R V + ++ A+S G SAK + E+F ++ + M
Sbjct: 122 KERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 164
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 103 bits (258), Expect = 6e-28
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTA 160
+ +FK+V+LG VGKS+L ++FV G F E + TI F + + +D EI DTA
Sbjct: 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 161 GTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLD 220
G E++ S+ +Y + Q +VVY +TN +F K + + + S + I L NK D
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVK-ELQRQASPNIVIALSGNKAD 122
Query: 221 LASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+++R V + Q+ A F+E SAK NVNE+F I +++
Sbjct: 123 -LANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 100 bits (248), Expect = 2e-26
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQ 164
K+V++G G GK+ L + F E Y PT+ + Y +IEVD L + DTAG E
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 165 FASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS- 223
+ +R L + ++ +S+ + + ++I + + VPI+LV NK DL +
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 121
Query: 224 ----------HQREVPTLDGQALAQSWGC-PFIEASAKNKTNVNEMFAEIVREM 266
Q V +G+ +A G ++E SAK K V E+F R
Sbjct: 122 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 175
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 98.2 bits (243), Expect = 9e-26
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYR--KEIEVDKAPCVLEILDTAGT 162
KV++LG GVGK++L ++V+ + ++Y TI + + +++ DTAG
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITR---VKGSERVPILLVANKL 219
E+F S+ + + V+VY +TN +F++IK ++ V E P +++ NK+
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 220 DLASHQREVPTLDGQALAQSWG-CPFIEASAKNKTNVNEMFAEIVREM 266
D ++ V Q LA+S G P SAKN NV+ F EI R
Sbjct: 123 DAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 170
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 96.7 bits (239), Expect = 3e-25
Identities = 60/164 (36%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
+ K+ +LG VGKS+LT+QFV G F++ YDPTIE+ + K I V+ L+++DTAG
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLA 222
++++ Y + G+++VYS+T+ +F+ IK + + + G ++PI+LV NK DL
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLH 122
Query: 223 SHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+ +G+ALA+SW F+E+SAK ++F I+ E
Sbjct: 123 MERVISYE-EGKALAESWNAAFLESSAKENQTAVDVFRRIILEA 165
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 96.3 bits (238), Expect = 6e-25
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQF 165
K+VV+G GK+AL F CF E Y PT+ + Y E+D L + DT+G+ +
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 63
Query: 166 ASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS-- 223
++R L + ++ + ++ T + + + + +LLV K DL +
Sbjct: 64 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKMLLVGCKSDLRTDV 122
Query: 224 ---------HQREVPTLDGQALAQSWG-CPFIEASAKNKTN-VNEMFAEIVREM 266
Q V G +A+ G +IE SA N V ++F
Sbjct: 123 STLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLAC 176
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 95.9 bits (237), Expect = 6e-25
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDK-APCVLEILDTAGTEQ 164
K+V+LG VGKS++ ++FVS F E +PTI + + EI DTAG E+
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 165 FASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLD--LA 222
FAS+ +Y +N Q +VVY +T +F + + + S+ + I LV NK+D
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVK-ELHEQASKDIIIALVGNKIDMLQE 123
Query: 223 SHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+R+V +G+ LA+ G F E SAK NVN++F I ++
Sbjct: 124 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 95.5 bits (236), Expect = 8e-25
Identities = 59/164 (35%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Query: 104 EFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTE 163
E K+ + G GVGKSAL V+F++ F+ +YDPT+E YR + +D +EI +
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI-LDTAGQ 60
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+ R+ +++ G+GFV+VY +T+ +F+++ +K ++ +K + V ++LV NK DL
Sbjct: 61 EDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLD- 119
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAK-NKTNVNEMFAEIVREM 266
H R+V T +G+ LA C F E SA + N+ E+F E+ RE+
Sbjct: 120 HSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREV 163
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 90.9 bits (224), Expect = 5e-23
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDKAPCVLEILDTAGTE 163
FK+V++G GG GK+ + ++G F +KY T+ + + ++ P + DTAG E
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLAS 223
+F +RD Y Q ++++ V+ E +PI+L NK+D+
Sbjct: 64 KFGGLRDGYYIQAQCAIIMF--DVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKD 121
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNP 270
+ + + + SAK+ N + F + R++ +P
Sbjct: 122 RK---VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDP 165
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 90.8 bits (224), Expect = 6e-23
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 101 TMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTA 160
++ E ++ VLG GKS+L +F++G + + + T + Y+KE+ VD ++ I
Sbjct: 2 SIPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLI---- 56
Query: 161 GTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSER--VPILLVANK 218
E+ + + + V+SL + ++FQ + ++ ++ ++G R + + LV +
Sbjct: 57 -REEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQ 115
Query: 219 LD-LASHQREVPTLDGQALAQS-WGCPFIEASAKNKTNVNEMFAEIVREM 266
AS R V +AL C + E A NV+ +F E+ +++
Sbjct: 116 DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKV 165
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 90.4 bits (223), Expect = 8e-23
Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 6/169 (3%)
Query: 100 FTMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDT 159
F +E ++++LG GK+ + + G + TI V + D
Sbjct: 8 FGNKEMRILMLGLDAAGKTTILYKLKLGQSVT----TIPTVGFNVETVTYKNVKFNVWDV 63
Query: 160 AGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANK- 218
G ++ + Y QG + V + + +Q I + IL+ ANK
Sbjct: 64 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQ 123
Query: 219 -LDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
L A E+ G + + A + + E +
Sbjct: 124 DLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY 172
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 89.3 bits (220), Expect = 2e-22
Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 6/169 (3%)
Query: 100 FTMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDT 159
F +E KV+++G GK+ + QF + + E+ + D
Sbjct: 11 FNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE----EIVINNTRFLMWDI 66
Query: 160 AGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL 219
G E S + Y N + +VV T+ ++ + + + +L+ ANK
Sbjct: 67 GGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQ 126
Query: 220 DL--ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
D+ E+ + A + + ++ +
Sbjct: 127 DVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 175
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 88.6 bits (218), Expect = 3e-22
Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 6/163 (3%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQF 165
+++++G GK+ + + G + TI V+ + D G ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLG----EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 166 ASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL--AS 223
+ Y +N QG + V + + ++ + +L+ ANK DL A
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 117
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+ E+ G + A + + E + ++
Sbjct: 118 NAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 88.6 bits (218), Expect = 4e-22
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQ 164
+KV++LG+ GVGKSAL F Y + I VD L + D +
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDGP-EAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 60
Query: 165 FASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLASH 224
+ + G +V+VYS+T+ +F+ +++ + R + ++ VPI+LV NK D
Sbjct: 61 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSD-LVR 119
Query: 225 QREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNPEK 272
REV +G+A A + C FIE SA NV +F +VR++ +
Sbjct: 120 SREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRRDS 167
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 89.0 bits (219), Expect = 4e-22
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIED-FYRKEIEVDKAPCVLEILDTAGTE 163
KV++LG GVGK++L Q+V+ F +Y TI F KE+ VD ++I DTAG E
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGS---ERVPILLVANKLD 220
+F S+ + + V+V+ +T +TF+ + ++ E P +++ NK+D
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 122
Query: 221 LASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
L +++ P+ E SAK NV + F I R
Sbjct: 123 L-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 167
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 88.5 bits (218), Expect = 4e-22
Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 6/166 (3%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
+E ++++LG GK+ L Q S + + + L + D G
Sbjct: 15 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQ----GFKLNVWDIGGQ 70
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL- 221
+ Y +N + V + F++ Q + + VP+L+ ANK DL
Sbjct: 71 RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLL 130
Query: 222 -ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
A+ E+ + SA V + + + +
Sbjct: 131 TAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 86.7 bits (213), Expect = 2e-21
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDKAPCVLEILDTAGTEQ 164
K+VV+G+G VGKS++ ++ G F + Y TI DF ++I+V+ L + DTAG E+
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 165 FASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLASH 224
F ++ Y + Q V+V+S T+ +F+ I +E + G ++ L
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLL---D 120
Query: 225 QREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+ + + LA+ F S K NV+E+F + +
Sbjct: 121 DSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 85.6 bits (210), Expect = 5e-21
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSG--CFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTA 160
++VV++G GVGKS L F + ED Y + + VD + +LD
Sbjct: 2 TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMW 61
Query: 161 -GTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL 219
+ + D ++ G +++VYS+T+ +F+ +++ + R + +E +PI+LV NK
Sbjct: 62 ENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 121
Query: 220 DLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
D REV +G+A A + C FIE SA + NV E+F IVR++
Sbjct: 122 D-LVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQV 167
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 84.6 bits (208), Expect = 1e-20
Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 6/166 (3%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
+E ++++LG G GK+ + + G + + + L + D G
Sbjct: 16 KELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYK----NLKLNVWDLGGQ 71
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLA 222
Y + + V T+ + L+ + + + +L+ ANK D
Sbjct: 72 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQP 131
Query: 223 SHQ--REVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
EV + + +SA + E ++ +
Sbjct: 132 GALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 177
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 84.0 bits (206), Expect = 2e-20
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 5/165 (3%)
Query: 104 EFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTE 163
E ++ ++G GK+ SG F E PT+ RK + K +++ D G
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK---ITKGNVTIKLWDIGGQP 58
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL-- 221
+F SM + Y + V + + + K + + +P+L++ NK DL
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 118
Query: 222 ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
A ++E+ + Q S K K N++ +++
Sbjct: 119 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHS 163
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 80.9 bits (198), Expect = 2e-19
Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 6/167 (3%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
RE ++++LG GK+ + +F E D ++ L I D G
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNG----EDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQ 56
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLA 222
+ S Y ++ G + V + QD ++ + + + +L+ ANK DL
Sbjct: 57 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLP 116
Query: 223 SHQ--REVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMN 267
+ +S SA ++ ++ +++
Sbjct: 117 GALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDIS 163
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 79.8 bits (195), Expect = 6e-19
Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 6/166 (3%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
RE ++++LG G GK+ + + G + TI V ++ D G
Sbjct: 4 REMRILILGLDGAGKTTILYRLQVG----EVVTTIPTIGFNVETVTYKNLKFQVWDLGGL 59
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDL- 221
Y N + V + K + + + +++ ANK D+
Sbjct: 60 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 119
Query: 222 -ASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
A E+ G + + SA T ++E +V +
Sbjct: 120 QAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 165
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 65.9 bits (159), Expect = 1e-13
Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 18/182 (9%)
Query: 100 FTMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDT 159
+ K+V LG GK+ L + E+ A D
Sbjct: 9 LYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSE----ELTIAGMTFTTFDL 64
Query: 160 AGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL 219
G Q + Y+ G V + +H + K+ + + + VPIL++ NK+
Sbjct: 65 GGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKI 124
Query: 220 DLASH-----------QREVPTLDGQALAQSWG---CPFIEASAKNKTNVNEMFAEIVRE 265
D T G + S + E F + +
Sbjct: 125 DRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQY 184
Query: 266 MN 267
++
Sbjct: 185 ID 186
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 64.7 bits (156), Expect = 2e-13
Identities = 25/168 (14%), Positives = 51/168 (30%), Gaps = 13/168 (7%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQF 165
K++ LG GK+ L + ++ E+ D G Q
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLAT----LQPTWHPTSEELAIGNIKFTTFDLGGHIQA 57
Query: 166 ASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL------ 219
+ Y G V + + F + + + + + + VP +++ NK+
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 117
Query: 220 ---DLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVR 264
+L S + T Q + S + E F + +
Sbjct: 118 SEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 57.2 bits (137), Expect = 2e-10
Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 19/174 (10%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
R K+++LG+G GKS Q + DPT E + + +++D G
Sbjct: 1 RLVKILLLGAGESGKSTFLKQM---RIIHGQDPTKGI---HEYDFEIKNVPFKMVDVGGQ 54
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMK----------ELITRVKGSERVPI 212
+ + + S + + E I + V I
Sbjct: 55 RSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSI 114
Query: 213 LLVANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
+L NK DL ++ + G P + + E F R+
Sbjct: 115 ILFLNKTDL-LEEKVQVVSIKDYFLEFEGDPHCLRDVQK--FLVECFRGKRRDQ 165
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 56.1 bits (134), Expect = 3e-10
Identities = 26/200 (13%), Positives = 51/200 (25%), Gaps = 46/200 (23%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
RE K+++LG+G GKS + Q E ++ D G
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMKIIHE-----AGT---GIVETHFTFKDLHFKMFDVGGQ 52
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMK----------ELITRVKGSERVPI 212
+ + +L+++ + + I K I
Sbjct: 53 RSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSI 112
Query: 213 LLVANKLDLASHQREVPTLDGQALAQSWG--------------------------CPFIE 246
+L NK ++ + + G
Sbjct: 113 ILFLNK-KDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHF 171
Query: 247 ASAKNKTNVNEMFAEIVREM 266
A + NV +F + V ++
Sbjct: 172 TCATDTKNVQFVF-DAVTDV 190
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 54.0 bits (129), Expect = 3e-09
Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 17/168 (10%)
Query: 104 EFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTE 163
++++LG+G GKS + Q T + + +VDK + D G
Sbjct: 6 THRLLLLGAGESGKSTIVKQMRIL----HVVLTS-GIFETKFQVDK--VNFHMFDVGGQR 58
Query: 164 QFASMRDLYIKNGQGFVVVYSLTNHHT----------FQDIKQMKELITRVKGSERVPIL 213
+ + V + ++++ Q+ + + I + + ++
Sbjct: 59 DERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVI 118
Query: 214 LVANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAE 261
L NK DL + + + + A + +
Sbjct: 119 LFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTR 166
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 52.3 bits (124), Expect = 7e-09
Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 3/121 (2%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQF 165
V+ +G GK+ L V+ ++G + + + ++ ++ + I
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLR 61
Query: 166 ASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQM---KELITRVKGSERVPILLVANKLDLA 222
+ D + + + V V + LI + +L+ NK D+A
Sbjct: 62 FQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIA 121
Query: 223 S 223
Sbjct: 122 M 122
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 49.6 bits (117), Expect = 7e-08
Identities = 31/199 (15%), Positives = 55/199 (27%), Gaps = 41/199 (20%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT 162
RE K+++LG+G GKS Q PT E D + ++D G
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHG--SGVPTT---GIIEYPFDLQSVIFRMVDVGGQ 55
Query: 163 EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKEL----------ITRVKGSERVPI 212
+N + + +L+ + + I + +
Sbjct: 56 RSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSV 115
Query: 213 LLVAN-------KLDLASHQREVPTLDGQALAQSWGCPFI------------------EA 247
+L N K+ + P DG FI
Sbjct: 116 ILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFT 175
Query: 248 SAKNKTNVNEMFAEIVREM 266
A + N+ +F V++
Sbjct: 176 CATDTENIRFVF-AAVKDT 193
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 42.0 bits (97), Expect = 1e-05
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 16/169 (9%)
Query: 105 FKVVVLGSGGVGKSAL-------TVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEIL 157
KVV+ G GKS+L V+ D E + + +
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 158 DTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVAN 217
+ E+ R V+ D ++ ++ +V N
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPIT-VVRN 120
Query: 218 KLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREM 266
K D+ +++ G I SA+ V+ + + + M
Sbjct: 121 KADITGET--------LGMSEVNGHALIRLSARTGEGVDVLRNHLKQSM 161
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 41.6 bits (96), Expect = 2e-05
Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 24/186 (12%)
Query: 107 VVVLGSGGVGKSAL-----------------TVQFVSGCFMEKYDPTIEDFYRKEIEVDK 149
++ G VGKS L T + + + + F +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 150 APCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSER 209
++ E A D+ + G + +I E ++ +
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELD- 121
Query: 210 VPILLVANKLDLASHQREVPTLDGQALAQSWG---CPFIEASAKNKTNVNEMFAEIVREM 266
+P ++ NKLD + +EV + FI SAK N+ + I +
Sbjct: 122 IPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEVI 181
Query: 267 NFNPEK 272
E+
Sbjct: 182 ---RER 184
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 40.8 bits (94), Expect = 8e-05
Identities = 19/184 (10%), Positives = 44/184 (23%), Gaps = 18/184 (9%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDKAPCVLEILDTAG 161
+ +++ G GK++L + PT+ + D + L
Sbjct: 2 YQPSIIIAGPQNSGKTSLLTLLTTD----SVRPTVVSQEPLSAADYDGSGVTLVDFPGHV 57
Query: 162 TEQFASMRDL---YIKNGQGFVVVYSLTNHHTFQDIKQMKELITRV---KGSERVPILLV 215
++ L +V S + + I + + IL+
Sbjct: 58 KLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIA 117
Query: 216 ANKLDLA-SHQREV------PTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNF 268
NK +L + + + +E + + F
Sbjct: 118 CNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQSTDGF 177
Query: 269 NPEK 272
Sbjct: 178 KFAN 181
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 37.5 bits (85), Expect = 7e-04
Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 9/167 (5%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGT-- 162
+V G GKS+ + + + T + L L G
Sbjct: 17 IEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAE 76
Query: 163 -------EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLV 215
+ ++ + K +V + H +D+ Q + +L
Sbjct: 77 VPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTK 136
Query: 216 ANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEI 262
A+KL + + ++ + LA + S+ K V+++ ++
Sbjct: 137 ADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKL 183
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 37.4 bits (85), Expect = 0.001
Identities = 29/171 (16%), Positives = 52/171 (30%), Gaps = 11/171 (6%)
Query: 105 FKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQ 164
KV ++G VGKS L ++ + EV +DTAG +
Sbjct: 9 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRR 68
Query: 165 FASMRDLYIKNGQGF-----------VVVYSLTNHHTFQDIKQMKELITRVKGSERVPIL 213
+ + ++ + VV+ + ++M L+ R + V
Sbjct: 69 KSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFN 128
Query: 214 LVANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVR 264
+ E L + L P I SA N++ M +
Sbjct: 129 KWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNL 179
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 37.4 bits (86), Expect = 0.001
Identities = 19/126 (15%), Positives = 31/126 (24%), Gaps = 17/126 (13%)
Query: 104 EFKVVVLGSGGVGKSAL------TVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEIL 157
V V G G GKS+ G + + + +
Sbjct: 56 VLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPN---VVFW 112
Query: 158 DTAGTEQFASMRDLYIKNGQGF---VVVYSLTNHHTFQDIKQMKELITRVKGSERVPILL 214
D G D Y++ + + + DI K + K
Sbjct: 113 DLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKK-----EFYF 167
Query: 215 VANKLD 220
V K+D
Sbjct: 168 VRTKVD 173
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 36.7 bits (83), Expect = 0.002
Identities = 20/170 (11%), Positives = 49/170 (28%), Gaps = 8/170 (4%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAP------CVLEILDT 159
++ + G VGKS+ ++ + + +
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 160 AGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL 219
+ +E+ A R + + + + +P++++A K
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKA 144
Query: 220 DLAS--HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMN 267
D + + Q L I S++ K +E + I + +N
Sbjct: 145 DKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMIN 194
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 35.7 bits (81), Expect = 0.002
Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 20/169 (11%)
Query: 106 KVVVLGSGGVGKSAL-------TVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILD 158
++V++G VGKS L V+ D E+ + I +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 159 TAGT-EQFASMRDL-YIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVA 216
T E+ R L I+ + V ++ +D K ++ + + V
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLV-------VI 114
Query: 217 NKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVRE 265
NK+D+ E + ++ SA + ++ I RE
Sbjct: 115 NKVDVVEKINEEEIKN----KLGTDRHMVKISALKGEGLEKLEESIYRE 159
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 35.7 bits (81), Expect = 0.003
Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 7/138 (5%)
Query: 130 MEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHH 189
E Y + K + +D G E + G ++V +
Sbjct: 64 PEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPF 123
Query: 190 TFQDIKQMKELITRVKGSERVPILLVANKLDLAS--HQREVPTLDGQALAQSWG--CPFI 245
++ + + +++V NK+D+ S Q +W P I
Sbjct: 124 PQPQTREHFVALGIIG---VKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPII 180
Query: 246 EASAKNKTNVNEMFAEIV 263
SA +K N++ + I
Sbjct: 181 PVSALHKINIDSLIEGIE 198
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 34.3 bits (77), Expect = 0.008
Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 3/167 (1%)
Query: 107 VVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQFA 166
+ ++G VGKS L + + +R + +DT G
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 167 SMRDLYIKNGQGFVVVYSLTNHHTFQDIK---QMKELITRVKGSERVPILLVANKLDLAS 223
+ N + + + E++ + P++L NK+D
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQ 127
Query: 224 HQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNP 270
+ ++ +Q + SA+ NV+ + A + + +
Sbjct: 128 EKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEAT 174
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.2 bits (69), Expect = 0.077
Identities = 26/176 (14%), Positives = 46/176 (26%), Gaps = 14/176 (7%)
Query: 103 REFKVVVLGSGGVGKSAL-------TVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPC-VL 154
V ++G VGKS L V +S ++ L
Sbjct: 4 YSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL 63
Query: 155 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILL 214
A E + + V V L + T +D + L V + +
Sbjct: 64 HKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGN 123
Query: 215 VANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNP 270
+ + SA ++ V E+ A+++ M P
Sbjct: 124 KLDAAKYPEEAMK------AYHELLPEAEPRMLSALDERQVAELKADLLALMPEGP 173
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 30.2 bits (67), Expect = 0.26
Identities = 18/130 (13%), Positives = 35/130 (26%), Gaps = 10/130 (7%)
Query: 102 MREFKVVVLGSGGVGKSAL------TVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLE 155
+ ++V+G GGVGKS+ F + + +
Sbjct: 30 VNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPG 89
Query: 156 ILDTAGTEQFASM---RDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERV-P 211
+++ A L K + V L + K + + IT G
Sbjct: 90 LIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 149
Query: 212 ILLVANKLDL 221
++
Sbjct: 150 AIVALTHAQF 159
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 29.3 bits (64), Expect = 0.38
Identities = 19/176 (10%), Positives = 52/176 (29%), Gaps = 7/176 (3%)
Query: 102 MREFKVVVLGSGGVGKSALT---VQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILD 158
+ + + G GK+ L+ + S +K + + +I +
Sbjct: 3 FKNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRIT 62
Query: 159 TAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANK 218
A + + + + + + + ++ + + +++ +
Sbjct: 63 LVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSD 122
Query: 219 LDLASHQREVPTLDGQALAQSWGC---PFIEASAKNKTNVNEMFAEIVREMNFNPE 271
+ + L + I SAK V+E+ I+ +N N E
Sbjct: 123 NAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLN-NAE 177
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 29.5 bits (65), Expect = 0.39
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Query: 102 MREFKVVVLGSGGVGKSALTV 122
MR +V + G GG+GKS T
Sbjct: 1 MR--QVAIYGKGGIGKSTTTQ 19
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 29.5 bits (65), Expect = 0.42
Identities = 23/208 (11%), Positives = 53/208 (25%), Gaps = 42/208 (20%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTI--EDFYRKEIEVDKAP---CVLEIL 157
R +V + G GVGKS S + + D + +
Sbjct: 50 RAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLA 109
Query: 158 DTAGTEQFASMR---------------DLYIKNGQGFVVVYSLTNHHTFQDIKQMKELIT 202
S L G ++V ++ + + + +
Sbjct: 110 IDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFL 169
Query: 203 RVKGSE-------------RVPILLVANKLDLASHQ---REVPTLDGQAL------AQSW 240
+ + ++ NK D + + AL + +W
Sbjct: 170 VLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHILTPPSATW 229
Query: 241 GCPFIEASAKNKTNVNEMFAEIVREMNF 268
P + S + ++ +++ I +
Sbjct: 230 TPPVVTISGLHGKGLDSLWSRIEDHRSK 257
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 29.5 bits (65), Expect = 0.45
Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Query: 102 MREFKVVVLGSGGVGKSALTV 122
MR + + G GG+GKS T
Sbjct: 2 MR--QCAIYGKGGIGKSTTTQ 20
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 28.6 bits (62), Expect = 0.55
Identities = 24/174 (13%), Positives = 46/174 (26%), Gaps = 16/174 (9%)
Query: 107 VVVLGSGGVGKSAL-------TVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDT 159
V+++G VGKS L V DP + +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 160 AGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKL 219
+ +V++ + + R + + + A L
Sbjct: 63 QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENL 122
Query: 220 DLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNPEKD 273
E L I SA++ N++ M I++++ EK
Sbjct: 123 R------EFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKL---EEKG 167
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 29.1 bits (64), Expect = 0.55
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 99 SFTMREFKVVVLGSGGVGKSA 119
+REF VV+G+GG G A
Sbjct: 2 KLPVREFDAVVIGAGGAGMRA 22
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 28.7 bits (63), Expect = 0.57
Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 18/178 (10%)
Query: 107 VVVLGSGGVGKSALTVQFVSGCFMEKYDP--TIEDFYRKEIEVDKAPCVLEILDTAGT-- 162
V ++G VGKS L S T+ D V + D G
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFV--MADLPGLIE 61
Query: 163 ---------EQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPIL 213
QF + + + +EL P +
Sbjct: 62 GAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQI 121
Query: 214 LVANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNFNPE 271
+VANK+D+ L+ + P SA + + E+ E+ ++ PE
Sbjct: 122 IVANKMDMPEAAEN---LEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLENTPE 176
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 28.7 bits (63), Expect = 0.68
Identities = 15/139 (10%), Positives = 40/139 (28%), Gaps = 11/139 (7%)
Query: 107 VVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAGTEQFA 166
++ G+ G GK+ L +FV K + + ++ +
Sbjct: 29 ILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQL-----------LRNAYSWG 77
Query: 167 SMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVANKLDLASHQR 226
+ + +V + ++ +K I K + L A ++++
Sbjct: 78 MDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAF 137
Query: 227 EVPTLDGQALAQSWGCPFI 245
+ A+ +
Sbjct: 138 RQFVIGVTGYAKQEEITGL 156
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 28.0 bits (61), Expect = 1.0
Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 1/102 (0%)
Query: 97 DNSFTMREFKVVVLGSGGVGKSALTVQFVSGCF-MEKYDPTIEDFYRKEIEVDKAPCVLE 155
++ F ++ +V+LG+GG + + G ++ ++ E F + + +
Sbjct: 11 ESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD 70
Query: 156 ILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQM 197
+ T + + + +
Sbjct: 71 CVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVN 112
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 27.7 bits (60), Expect = 1.5
Identities = 31/197 (15%), Positives = 57/197 (28%), Gaps = 18/197 (9%)
Query: 102 MREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEILDTAG 161
+R V VLG GK+ L + I + E+ D
Sbjct: 3 IRSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQ-HIGATEIPMDVIEGICGDFLK 61
Query: 162 TEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSE------------- 208
++ ++ +G +
Sbjct: 62 KFSIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMY 121
Query: 209 RVPILLVANKLDLASHQREVPTLDGQALAQSWGCPFIEASAKNKTNVNEMFAEIVREMNF 268
R P ++ ANK+D R +G+ +++ I+ K T V E+ ++ E F
Sbjct: 122 RTPFVVAANKIDRIHGWRV---HEGRPFMETFSKQDIQVQQKLDTKVYELVGKL-HEEGF 177
Query: 269 NPEKDNASFCWCSSCSI 285
E+ + + S SI
Sbjct: 178 ESERFDRVTDFASQVSI 194
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 27.6 bits (60), Expect = 1.6
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 107 VVVLGSGGVGKSALTVQF 124
++++G GGVGK+ +
Sbjct: 23 IMLMGKGGVGKTTMAAAI 40
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 27.6 bits (60), Expect = 1.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 107 VVVLGSGGVGKSALTV 122
+ G GGVGK++++
Sbjct: 11 LFFTGKGGVGKTSISC 26
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE
{Escherichia coli [TaxId: 562]}
Length = 170
Score = 27.2 bits (59), Expect = 1.7
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 97 DNSFTMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDF 140
SF +++++G+GG + L C + + T+
Sbjct: 11 RLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRA 54
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE
{Haemophilus influenzae [TaxId: 727]}
Length = 171
Score = 27.2 bits (59), Expect = 1.7
Identities = 20/148 (13%), Positives = 37/148 (25%), Gaps = 16/148 (10%)
Query: 97 DNSFTMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDKAPCVLEI 156
++ V++LG+GG K L + + + T K + E
Sbjct: 11 RLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFS----------KTKELAER 60
Query: 157 LDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLVA 216
G Q SM + ++ + S + + +
Sbjct: 61 FQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDT 120
Query: 217 NKLDLASHQREVPTLDG------QALAQ 238
+ L DG QA
Sbjct: 121 PFIALCKSLGLTNVSDGFGMLVAQAAHS 148
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae
[TaxId: 666]}
Length = 330
Score = 27.3 bits (59), Expect = 2.1
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 156 ILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELITRVKGSERVPILLV 215
LD AG E A R++ G V+++ + D +Q+ L ++ + + PIL+
Sbjct: 6 WLDVAGYELSAEDREILQHPTVGGVILFG----RNYHDNQQLLALNKAIRQAAKRPILIG 61
Query: 216 AN 217
+
Sbjct: 62 VD 63
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 27.3 bits (59), Expect = 2.1
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 243 PFIEASAKNKTNVNEMFAEIV 263
P I SA + N++ + I
Sbjct: 170 PIIPISALHGANIDVLVKAIE 190
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 26.6 bits (58), Expect = 2.3
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 99 SFTMREFKVVVLGSGGVGKSA 119
+ R KV ++GSG +G +
Sbjct: 2 ALVQRRKKVAMIGSGMIGGTM 22
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.9 bits (58), Expect = 2.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 107 VVVLGSGGVGKSALTVQFVSGCFMEKYDP 135
+V G+ G GK+ ++QF+ +E +P
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNGIIEFDEP 57
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 26.4 bits (57), Expect = 4.2
Identities = 31/207 (14%), Positives = 55/207 (26%), Gaps = 41/207 (19%)
Query: 103 REFKVVVLGSGGVGKSALTVQFVSGCFMEKYDP------TIEDFYRKEIEVDKAPCVLEI 156
++ V G+ G GKS F E I DK
Sbjct: 53 NTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLA 112
Query: 157 LDTAGTEQFAS--------------MRDLYIKNGQGFVVVYSLTNHHTFQDIKQMKELIT 202
A + + L G V+V ++ + ++ +M +
Sbjct: 113 RAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFI 172
Query: 203 RVKGSE-------------RVPILLVANKLDLASHQREVPTLDGQALA--------QSWG 241
++ + V L+V NK D +H A W
Sbjct: 173 SLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQ 232
Query: 242 CPFIEASAKNKTNVNEMFAEIVREMNF 268
+ SA K ++E++ I+
Sbjct: 233 PRVLTCSALEKRGIDEIWHAIIDFKTA 259
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 26.3 bits (57), Expect = 4.4
Identities = 25/181 (13%), Positives = 46/181 (25%), Gaps = 17/181 (9%)
Query: 90 LLPRCSIDNSFTMREFKVVVLGSGGVGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDK 149
LL + T++E + G + TI + + +
Sbjct: 23 LLMDRGFIDEKTVKEAEEAA-KKLGKESEKFAFLLDRLKEERERGVTINLTF---MRFET 78
Query: 150 APCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLT---NHHTFQDIKQMKELITRVKG 206
I+D G F ++V S Q +E I K
Sbjct: 79 KKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKT 138
Query: 207 SERVPILLVANKLDLASHQR----------EVPTLDGQALAQSWGCPFIEASAKNKTNVN 256
+++ NK+DL +V + F+ A + N+
Sbjct: 139 MGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNIT 198
Query: 257 E 257
Sbjct: 199 H 199
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 25.4 bits (55), Expect = 5.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 97 DNSFTMREFKVVVLGSGGVG 116
+ T+ K+ V+G G VG
Sbjct: 13 EEEATVPNNKITVVGVGQVG 32
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 25.5 bits (55), Expect = 7.2
Identities = 15/104 (14%), Positives = 28/104 (26%), Gaps = 14/104 (13%)
Query: 101 TMREFKVVVLGSGGVGKSA--------LTVQFVSGCFMEKYDPTIED------FYRKEIE 146
T + K+++LGSG G +A L ++G T +
Sbjct: 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTG 61
Query: 147 VDKAPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHHT 190
+ E TE + + F + +
Sbjct: 62 PLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTC 105
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein
HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 25.2 bits (54), Expect = 7.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 106 KVVVLGSGGVGKSALTVQFVSGC 128
KV+V GSGG+ K+ + SG
Sbjct: 19 KVIVHGSGGMAKAVVAAFKNSGF 41
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 25.4 bits (54), Expect = 8.6
Identities = 6/30 (20%), Positives = 9/30 (30%)
Query: 107 VVVLGSGGVGKSALTVQFVSGCFMEKYDPT 136
++V G+GKS Q
Sbjct: 38 IMVTSGSGMGKSTFVRQQALQWGTAMGKKV 67
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 177
Score = 25.0 bits (53), Expect = 9.0
Identities = 4/24 (16%), Positives = 13/24 (54%)
Query: 97 DNSFTMREFKVVVLGSGGVGKSAL 120
+ +++ +V+ G+GG ++
Sbjct: 11 EEIGRVKDKNIVIYGAGGAARAVA 34
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644)
{Thermus thermophilus [TaxId: 274]}
Length = 208
Score = 25.1 bits (54), Expect = 9.0
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 8/48 (16%)
Query: 70 SHTASWSLFVILSVFLVPTDLLPRCSIDNSFTMREFKVVVLGSGGVGK 117
H SW LF IL+ F+ + L + V V GS G+
Sbjct: 7 HHEDSWRLFRILAEFVEGFETLSELQVP--------LVSVFGSARFGE 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.398
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,057,486
Number of extensions: 49375
Number of successful extensions: 443
Number of sequences better than 10.0: 1
Number of HSP's gapped: 366
Number of HSP's successfully gapped: 104
Length of query: 286
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 202
Effective length of database: 1,254,276
Effective search space: 253363752
Effective search space used: 253363752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.5 bits)