Your job contains 1 sequence.
>psy10506
MHRIYGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRTADVNLLIIYEQDKQ
GQQQQEQELATKMLQIQSKRFYLDVKQNRRGRFIKVNNIPIAICLNCQQQQEQELATKML
QIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDYYASLGP
PNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMI
EFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQIAIPAQGMIEFRDALTDL
LEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIA
IPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVS
EHYYIIPFDSLVVDQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10506
(435 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0022361 - symbol:Pur-alpha "Purine-rich binding pr... 656 2.3e-64 1
ZFIN|ZDB-GENE-040426-1478 - symbol:purbb "purine-rich ele... 347 6.1e-52 2
ZFIN|ZDB-GENE-040624-8 - symbol:pura "purine-rich element... 434 7.5e-41 1
UNIPROTKB|E1BMW9 - symbol:PURA "Uncharacterized protein" ... 407 5.5e-38 1
UNIPROTKB|Q00577 - symbol:PURA "Transcriptional activator... 407 5.5e-38 1
UNIPROTKB|I3LCN6 - symbol:PURA "Uncharacterized protein" ... 407 5.5e-38 1
MGI|MGI:103079 - symbol:Pura "purine rich element binding... 407 5.5e-38 1
UNIPROTKB|Q96QR8 - symbol:PURB "Transcriptional activator... 400 3.0e-37 1
MGI|MGI:1338779 - symbol:Purb "purine rich element bindin... 396 8.0e-37 1
UNIPROTKB|Q9MYX6 - symbol:Q9MYX6 "DNA binding protein pur... 394 1.3e-36 1
RGD|1559465 - symbol:Purb "purine rich element binding pr... 394 1.3e-36 1
UNIPROTKB|H9L298 - symbol:H9L298 "Uncharacterized protein... 373 2.2e-34 1
UNIPROTKB|G3N0W8 - symbol:PURB "Uncharacterized protein" ... 339 8.8e-31 1
MGI|MGI:1922279 - symbol:Purg "purine-rich element bindin... 296 3.2e-26 1
WB|WBGene00004046 - symbol:plp-1 species:6239 "Caenorhabd... 264 4.4e-26 2
UNIPROTKB|Q9UJV8 - symbol:PURG "Purine-rich element-bindi... 272 1.5e-23 1
TAIR|locus:2045497 - symbol:PUR ALPHA-1 "AT2G32080" speci... 221 9.7e-18 1
RGD|1308543 - symbol:Pura "purine rich element binding pr... 182 1.9e-13 1
>FB|FBgn0022361 [details] [associations]
symbol:Pur-alpha "Purine-rich binding protein-alpha"
species:7227 "Drosophila melanogaster" [GO:0003697 "single-stranded
DNA binding" evidence=NAS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0031935 "regulation of
chromatin silencing" evidence=IMP] Pfam:PF04845 GO:GO:0005634
GO:GO:0043565 EMBL:AE014135 OMA:REKRACE InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
GO:GO:0031935 FlyBase:FBgn0022361 UniGene:Dm.5734 GeneID:43797
KEGG:dme:Dmel_CG1507 CTD:43797 GenomeRNAi:43797 NextBio:835896
RefSeq:NP_524624.1 PDB:3K44 PDBsum:3K44 ProteinModelPortal:Q9V4D9
SMR:Q9V4D9 STRING:Q9V4D9 EnsemblMetazoa:FBtr0089995
EnsemblMetazoa:FBtr0310639 UCSC:CG1507-RB InParanoid:Q9V4D9
PhylomeDB:Q9V4D9 EvolutionaryTrace:Q9V4D9 ArrayExpress:Q9V4D9
Bgee:Q9V4D9 Uniprot:Q9V4D9
Length = 275
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 126/145 (86%), Positives = 135/145 (93%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LATKMLQIQSKRFYLDVKQNRRGRFIKVAE+GADGRRSQI+LALS A +FR HLS+FSDY
Sbjct: 44 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIYLALSTAAEFRDHLSSFSDY 103
Query: 175 YASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAI 234
YASLGPPN D +P+DGKLKSE+M+KD RRYYLDLKEN RGRFLRVSQTI RGGPRSQIA+
Sbjct: 104 YASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIAL 163
Query: 235 PAQGMIEFRDALTDLLEEFGTEDGG 259
PAQGMIEFRDALTDLLEEFG DGG
Sbjct: 164 PAQGMIEFRDALTDLLEEFGANDGG 188
Score = 410 (149.4 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 86/150 (57%), Positives = 108/150 (72%)
Query: 278 GPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPE-GR---HMRVEN-KNFYFDI 332
G RSQI + EFRD L+ + + + LPE G+ M +++ + +Y D+
Sbjct: 78 GRRSQIYLALSTAAEFRDHLSSFSDYYASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDL 137
Query: 333 GQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGG-YKGEL 391
+N RG ++RVS QTI RGGPRSQIA+PAQGMIEFRDALTDLLEEFG DGG +KG+L
Sbjct: 138 KENARGRFLRVS---QTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGANDGGRFKGDL 194
Query: 392 PEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
PE RHM+V+NKNFYFDIGQNNRG+YMR+SE
Sbjct: 195 PEERHMKVDNKNFYFDIGQNNRGVYMRISE 224
Score = 384 (140.2 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 77/124 (62%), Positives = 89/124 (71%)
Query: 269 QVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGG-YKGELPEGRHMRVENKN 327
+VSQTI RGGPRSQIA+PAQGMIEFRDALTDLLEEFG DGG +KG+LPE RHM+V+NKN
Sbjct: 147 RVSQTITRGGPRSQIALPAQGMIEFRDALTDLLEEFGANDGGRFKGDLPEERHMKVDNKN 206
Query: 328 FYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGY 387
FYFDIGQNNRG+YMR+SEV R+ I IP + I FRD D E+
Sbjct: 207 FYFDIGQNNRGVYMRISEVKNNF-----RTSITIPEKCWIRFRDIFNDYCEKMKKSSDSI 261
Query: 388 KGEL 391
E+
Sbjct: 262 TAEI 265
Score = 182 (69.1 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 45/140 (32%), Positives = 78/140 (55%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAE-VGADGRRSQIFLALSVAEQFRGHLS-AFS 172
L ++M+ +R+YLD+K+N RGRF++V++ + G RSQI L +FR L+
Sbjct: 121 LKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGPRSQIALPAQGMIEFRDALTDLLE 180
Query: 173 DYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQI 232
++ A+ G +P++ +K DN+ +Y D+ +N RG ++R+S+ + R+ I
Sbjct: 181 EFGANDGGRFKGDLPEERHMKV-----DNKNFYFDIGQNNRGVYMRISEV--KNNFRTSI 233
Query: 233 AIPAQGMIEFRDALTDLLEE 252
IP + I FRD D E+
Sbjct: 234 TIPEKCWIRFRDIFNDYCEK 253
Score = 180 (68.4 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 6 GPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRTA 47
GPPN D +P+DGKLKSE+M+KD RRYYLDLKEN RGRFLR +
Sbjct: 108 GPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVS 149
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/117 (30%), Positives = 65/117 (55%)
Query: 310 GYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEF 369
G + EL + +++++K FY D+ QN RG +++V+E+ G RSQI + EF
Sbjct: 39 GVEQELAT-KMLQIQSKRFYLDVKQNRRGRFIKVAEIGAD----GRRSQIYLALSTAAEF 93
Query: 370 RDALTDLLEEFGTEDGGYKGELPE-GR---HMRVEN-KNFYFDIGQNNRGIYMRVSE 421
RD L+ + + + LPE G+ M +++ + +Y D+ +N RG ++RVS+
Sbjct: 94 RDHLSSFSDYYASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQ 150
Score = 140 (54.3 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 29/31 (93%), Positives = 29/31 (93%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LATKMLQIQSKRFYLDVKQNRRGRFIKV I
Sbjct: 44 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEI 74
Score = 112 (44.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L ++++ ++R+YLD+K+N RGRF++V++ I G RSQI + EFRD L+
Sbjct: 43 ELATKMLQIQSKRFYLDVKQNRRGRFIKVAE-IGADGRRSQIYLALSTAAEFRDHLSSFS 101
Query: 251 EEFGT 255
+ + +
Sbjct: 102 DYYAS 106
Score = 80 (33.2 bits), Expect = 5.6e-49, Sum P(3) = 5.6e-49
Identities = 12/32 (37%), Positives = 26/32 (81%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L ++++ ++R+YLD+K+N RGRF++ A++
Sbjct: 43 ELATKMLQIQSKRFYLDVKQNRRGRFIKVAEI 74
Score = 75 (31.5 bits), Expect = 5.6e-49, Sum P(3) = 5.6e-49
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVN 97
L ++M+ +R+YLD+K+N RGRF++V+
Sbjct: 121 LKSEMMIKDYRRYYLDLKENARGRFLRVS 149
Score = 64 (27.6 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
+++ +K FY D+ QN RG +++++ +
Sbjct: 200 MKVDNKNFYFDIGQNNRGVYMRISEV 225
>ZFIN|ZDB-GENE-040426-1478 [details] [associations]
symbol:purbb "purine-rich element binding protein
Bb" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
Pfam:PF04845 ZFIN:ZDB-GENE-040426-1478 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
EMBL:BC056517 EMBL:BC067670 IPI:IPI00498661 RefSeq:NP_956841.1
UniGene:Dr.83952 PRIDE:Q6PHK6 Ensembl:ENSDART00000081308
GeneID:393519 KEGG:dre:393519 CTD:393519 OMA:KENVRGR
NextBio:20814545 Bgee:Q6PHK6 Uniprot:Q6PHK6
Length = 297
Score = 347 (127.2 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 70/121 (57%), Positives = 92/121 (76%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K L IQ+KRFYLDVKQN +GRFIK+AEVGA G +S++ L++SVA +FR +L F ++
Sbjct: 29 LASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYLGDFIEH 88
Query: 175 YASLGPPNPDTVP-----DDG----KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPR 225
YA LGP +P+ + DDG LKSE +V++NR+YYLDLKEN RGRFLR+ QT+ R
Sbjct: 89 YAQLGPSSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNR 148
Query: 226 G 226
G
Sbjct: 149 G 149
Score = 209 (78.6 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
Identities = 52/133 (39%), Positives = 77/133 (57%)
Query: 275 PRGGPRS--QIAIPAQGMIEFRDALTDLLEEFGTED----------GGYKGELPEGRHMR 322
P GG ++ IA+PAQG+IEFRDAL L++++G ED GGY GELPEG +
Sbjct: 160 PGGGVQAGQTIALPAQGLIEFRDALAKLIDDYGGEDEELSGGPGAAGGY-GELPEGTSIM 218
Query: 323 VENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGT 382
V++K F+FD+G N G+++RVSEV + R+ I IP + +F A + EE
Sbjct: 219 VDSKRFFFDVGSNKYGVFLRVSEVKPSY-----RNSITIPFKAWGKFGGAFSRYAEEMKE 273
Query: 383 EDGGYKGELPEGR 395
++ ++ E R
Sbjct: 274 IQERHRDKMYERR 286
Score = 209 (78.6 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 72/211 (34%), Positives = 105/211 (49%)
Query: 226 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTI--PRGGPRSQI 283
GG +S++ + EFRD L D +E + + G P Q++Q+ GGPR
Sbjct: 62 GGSKSRLTLSMSVAAEFRDYLGDFIEHYA-QLGPSS-----PEQIAQSSGGDDGGPRR-- 113
Query: 284 AIPAQGMI-EFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMR 342
A+ ++ ++ E R DL E GR +R+ NRG
Sbjct: 114 ALKSEFLVRENRKYYLDLKEN------------QRGRFLRIRQTV--------NRGPGFG 153
Query: 343 VSEVSQTIPRGGPRS--QIAIPAQGMIEFRDALTDLLEEFGTED----------GGYKGE 390
V P GG ++ IA+PAQG+IEFRDAL L++++G ED GGY GE
Sbjct: 154 VGGGGG--PGGGVQAGQTIALPAQGLIEFRDALAKLIDDYGGEDEELSGGPGAAGGY-GE 210
Query: 391 LPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
LPEG + V++K F+FD+G N G+++RVSE
Sbjct: 211 LPEGTSIMVDSKRFFFDVGSNKYGVFLRVSE 241
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 319 RHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLE 378
+ + ++NK FY D+ QN +G +++++EV GG +S++ + EFRD L D +E
Sbjct: 32 KRLDIQNKRFYLDVKQNAKGRFIKIAEVGA----GGSKSRLTLSMSVAAEFRDYLGDFIE 87
Query: 379 EF---------------GTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
+ G +DGG + L +R EN+ +Y D+ +N RG ++R+ +
Sbjct: 88 HYAQLGPSSPEQIAQSSGGDDGGPRRALKSEFLVR-ENRKYYLDLKENQRGRFLRIRQ 144
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/115 (31%), Positives = 65/115 (56%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRF+++++ + GG +S++ + EFRD L D +
Sbjct: 28 ELASKRLDIQNKRFYLDVKQNAKGRFIKIAE-VGAGGSKSRLTLSMSVAAEFRDYLGDFI 86
Query: 251 EEFGTEDGGYKVLSLVPHQVSQTI--PRGGPRSQIAIPAQGMI-EFRDALTDLLE 302
E + + G P Q++Q+ GGPR A+ ++ ++ E R DL E
Sbjct: 87 EHYA-QLGPSS-----PEQIAQSSGGDDGGPRR--ALKSEFLVRENRKYYLDLKE 133
Score = 122 (48.0 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 6 GPPNPDTVP-----DDG----KLKSEVMVKDNRRYYLDLKENTRGRFLR 45
GP +P+ + DDG LKSE +V++NR+YYLDLKEN RGRFLR
Sbjct: 93 GPSSPEQIAQSSGGDDGGPRRALKSEFLVRENRKYYLDLKENQRGRFLR 141
Score = 111 (44.1 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K L IQ+KRFYLDVKQN +GRFIK+ +
Sbjct: 29 LASKRLDIQNKRFYLDVKQNAKGRFIKIAEV 59
Score = 86 (35.3 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 41/140 (29%), Positives = 60/140 (42%)
Query: 123 QSKRFYLDVKQN-RRGRFIKVAEVGADGRRSQIFLALSVAEQ----FRGHLSAFSDYYAS 177
Q RF L ++Q RG V G G Q +++ Q FR L+ D Y
Sbjct: 135 QRGRF-LRIRQTVNRGPGFGVGGGGGPGGGVQAGQTIALPAQGLIEFRDALAKLIDDYGG 193
Query: 178 LGPP---NPDTVPDDGKLK--SEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQI 232
P G+L + +MV D++R++ D+ N G FLRVS+ P R+ I
Sbjct: 194 EDEELSGGPGAAGGYGELPEGTSIMV-DSKRFFFDVGSNKYGVFLRVSEVKP--SYRNSI 250
Query: 233 AIPAQGMIEFRDALTDLLEE 252
IP + +F A + EE
Sbjct: 251 TIPFKAWGKFGGAFSRYAEE 270
Score = 81 (33.6 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRF++ A+V
Sbjct: 28 ELASKRLDIQNKRFYLDVKQNAKGRFIKIAEV 59
Score = 79 (32.9 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 120 LQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSD 173
+ + SKRF+ DV N+ G F++V+EV R S I + +F G S +++
Sbjct: 217 IMVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNS-ITIPFKAWGKFGGAFSRYAE 269
Score = 75 (31.5 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++YLD+K+N+RGRF+++
Sbjct: 115 LKSEFLVRENRKYYLDLKENQRGRFLRI 142
Score = 63 (27.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
+ + SKRF+ DV N+ G F++V+ +
Sbjct: 217 IMVDSKRFFFDVGSNKYGVFLRVSEV 242
>ZFIN|ZDB-GENE-040624-8 [details] [associations]
symbol:pura "purine-rich element binding protein A"
species:7955 "Danio rerio" [GO:0003690 "double-stranded DNA
binding" evidence=IDA] Pfam:PF04845 ZFIN:ZDB-GENE-040624-8
GO:GO:0003690 CTD:5813 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OMA:REKRACE OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
EMBL:CT573432 EMBL:BC081472 EMBL:BC151877 EMBL:AY450553
IPI:IPI00506479 RefSeq:NP_001001846.1 UniGene:Dr.145037
UniGene:Dr.151288 UniGene:Dr.161632 UniGene:Dr.85924
Ensembl:ENSDART00000097307 Ensembl:ENSDART00000138017 GeneID:415106
KEGG:dre:415106 InParanoid:Q6JIZ2 NextBio:20818791 Uniprot:Q6JIZ2
Length = 287
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 85/150 (56%), Positives = 116/150 (77%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K + IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L++SVA +FR +L F ++
Sbjct: 42 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 101
Query: 175 YASLGPPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG----GP 228
YA LGP NPD D+ + LKSE +V++NR+YY+DLKEN RGRFLR+ QT+ RG
Sbjct: 102 YAQLGPSNPDMPQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGST 161
Query: 229 RSQ-IAIPAQGMIEFRDALTDLLEEFGTED 257
+ Q IA+PAQG+IEFRDAL L++++G ED
Sbjct: 162 QGQTIALPAQGLIEFRDALAKLIDDYGVED 191
Score = 281 (104.0 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 60/155 (38%), Positives = 92/155 (59%)
Query: 277 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV--------ENKNF 328
GG +S++ + +EFRD L D +E + + G ++P+ R EN+ +
Sbjct: 75 GGNKSRLTLSMSVAVEFRDYLGDFIEHYA-QLGPSNPDMPQDEPRRALKSEFLVRENRKY 133
Query: 329 YFDIGQNNRGIYMRVSEVSQTIPR-GGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGG 386
Y D+ +N RG ++R+ + P G + Q IA+PAQG+IEFRDAL L++++G ED
Sbjct: 134 YMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEDE- 192
Query: 387 YKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG + V+NK F+FD+G N G++MRVSE
Sbjct: 193 -PAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSE 226
Score = 212 (79.7 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 269 QVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV 323
++ QT+ RG + Q IA+PAQG+IEFRDAL L++++G ED ELPEG + V
Sbjct: 147 RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEDE--PAELPEGTSLTV 204
Query: 324 ENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+NK F+FD+G N G++MRVSEV T R+ I +P + +F +E
Sbjct: 205 DNKRFFFDVGSNKYGVFMRVSEVKPTY-----RNSITVPYKVWSKFGSTFCKYADE 255
Score = 151 (58.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 34/122 (27%), Positives = 65/122 (53%)
Query: 310 GYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMI 367
G + E E + + ++NK FY D+ QN +G +++++EV GG +S++ + +
Sbjct: 34 GLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGNKSRLTLSMSVAV 89
Query: 368 EFRDALTDLLEEFGTEDGGYKGELPEGRHMRV--------ENKNFYFDIGQNNRGIYMRV 419
EFRD L D +E + + G ++P+ R EN+ +Y D+ +N RG ++R+
Sbjct: 90 EFRDYLGDFIEHYA-QLGPSNPDMPQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRI 148
Query: 420 SE 421
+
Sbjct: 149 RQ 150
Score = 136 (52.9 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 6 GPPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLR 45
GP NPD D+ + LKSE +V++NR+YY+DLKEN RGRFLR
Sbjct: 106 GPSNPDMPQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLR 147
Score = 126 (49.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + +EFRD L D +
Sbjct: 41 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGNKSRLTLSMSVAVEFRDYLGDFI 99
Query: 251 EEF 253
E +
Sbjct: 100 EHY 102
Score = 126 (49.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV-----GADGRRSQ-IFLALSVAEQFRGHL 168
L ++ L +++++Y+D+K+N+RGRF+++ + G + Q I L +FR L
Sbjct: 121 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 180
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
+ D Y P +P+ L DN+R++ D+ N G F+RVS+ P
Sbjct: 181 AKLIDDYGV--EDEPAELPEGTSL-----TVDNKRFFFDVGSNKYGVFMRVSEVKPTY-- 231
Query: 229 RSQIAIPAQGMIEFRDALTDLLEE 252
R+ I +P + +F +E
Sbjct: 232 RNSITVPYKVWSKFGSTFCKYADE 255
Score = 106 (42.4 bits), Expect = 3.6e-34, Sum P(2) = 3.6e-34
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K + IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 42 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 72
Score = 82 (33.9 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 41 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 72
Score = 73 (30.8 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 10/28 (35%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++Y+D+K+N+RGRF+++
Sbjct: 121 LKSEFLVRENRKYYMDLKENQRGRFLRI 148
Score = 60 (26.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
L + +KRF+ DV N+ G F++V+ +
Sbjct: 202 LTVDNKRFFFDVGSNKYGVFMRVSEV 227
>UNIPROTKB|E1BMW9 [details] [associations]
symbol:PURA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032422
"purine-rich negative regulatory element binding" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006268 "DNA unwinding
involved in replication" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA] [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=IEA] Pfam:PF04845 GO:GO:0005737 GO:GO:0045892
GO:GO:0007399 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0003700 GO:GO:0003697 GO:GO:0000900 GO:GO:0006268
GO:GO:0005662 GO:GO:0032422 GO:GO:0003691 CTD:5813 OMA:REKRACE
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712
GeneTree:ENSGT00390000015406 EMBL:DAAA02020426 IPI:IPI00823901
RefSeq:NP_001192363.1 UniGene:Bt.91641 PRIDE:E1BMW9
Ensembl:ENSBTAT00000011694 GeneID:782746 KEGG:bta:782746
NextBio:20925662 Uniprot:E1BMW9
Length = 322
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/153 (53%), Positives = 115/153 (75%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K + IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L++SVA +FR +L F ++
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 120
Query: 175 YASLGPPNPDTVP---DDGK--LKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG--- 226
YA LGP P + D+ + LKSE +V++NR+YY+DLKEN RGRFLR+ QT+ RG
Sbjct: 121 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 180
Query: 227 -GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 257
+ Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 181 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 213
Score = 264 (98.0 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 58/157 (36%), Positives = 91/157 (57%)
Query: 277 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NK 326
GG +S++ + +EFRD L D +E + +L + R ++ E N+
Sbjct: 94 GGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENR 153
Query: 327 NFYFDIGQNNRGIYMRVSEVSQTIPR-GGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 384
+Y D+ +N RG ++R+ + P G + Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 154 KYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 213
Query: 385 GGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG + V+NK F+FD+G N G++MRVSE
Sbjct: 214 E--PAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSE 248
Score = 210 (79.0 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 269 QVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV 323
++ QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELPEG + V
Sbjct: 169 RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEE--PAELPEGTSLTV 226
Query: 324 ENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+NK F+FD+G N G++MRVSEV T R+ I +P + +F EE
Sbjct: 227 DNKRFFFDVGSNKYGVFMRVSEVKPTY-----RNSITVPYKVWAKFGHTFCKYSEE 277
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 305 GTEDGGYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIP 362
G GG + E E + + ++NK FY D+ QN +G +++++EV GG +S++ +
Sbjct: 48 GGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGNKSRLTLS 103
Query: 363 AQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NKNFYFDIGQNN 412
+EFRD L D +E + +L + R ++ E N+ +Y D+ +N
Sbjct: 104 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQ 163
Query: 413 RGIYMRVSE 421
RG ++R+ +
Sbjct: 164 RGRFLRIRQ 172
Score = 128 (50.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV-----GADGRRSQ-IFLALSVAEQFRGHL 168
L ++ L +++++Y+D+K+N+RGRF+++ + G + Q I L +FR L
Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 202
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
+ D Y P +P+ L DN+R++ D+ N G F+RVS+ P
Sbjct: 203 AKLIDDYGV--EEEPAELPEGTSL-----TVDNKRFFFDVGSNKYGVFMRVSEVKPTY-- 253
Query: 229 RSQIAIPAQGMIEFRDALTDLLEE 252
R+ I +P + +F EE
Sbjct: 254 RNSITVPYKVWAKFGHTFCKYSEE 277
Score = 126 (49.4 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + +EFRD L D +
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGNKSRLTLSMSVAVEFRDYLGDFI 118
Query: 251 EEF 253
E +
Sbjct: 119 EHY 121
Score = 117 (46.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 7 PPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLR 45
PP+ D+ + LKSE +V++NR+YY+DLKEN RGRFLR
Sbjct: 129 PPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLR 169
Score = 106 (42.4 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K + IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 82 (33.9 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 73 (30.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 10/28 (35%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++Y+D+K+N+RGRF+++
Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRI 170
Score = 60 (26.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
L + +KRF+ DV N+ G F++V+ +
Sbjct: 224 LTVDNKRFFFDVGSNKYGVFMRVSEV 249
>UNIPROTKB|Q00577 [details] [associations]
symbol:PURA "Transcriptional activator protein Pur-alpha"
species:9606 "Homo sapiens" [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032422 "purine-rich negative regulatory element binding"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0006268
"DNA unwinding involved in replication" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IC] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005662 "DNA
replication factor A complex" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006270 "DNA replication initiation"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF04845 GO:GO:0005737 GO:GO:0045892 GO:GO:0007399
GO:GO:0008284 GO:GO:0043025 GO:GO:0030425 GO:GO:0003705
GO:GO:0006270 GO:GO:0003697 GO:GO:0008134 GO:GO:0000784
GO:GO:0000900 GO:GO:0006268 GO:GO:0005662 GO:GO:0032422
GO:GO:0003691 EMBL:M96684 EMBL:U02098 IPI:IPI00023591 PIR:A45036
RefSeq:NP_005850.1 UniGene:Hs.443121 UniGene:Hs.733524
ProteinModelPortal:Q00577 SMR:Q00577 IntAct:Q00577 STRING:Q00577
PhosphoSite:Q00577 DMDM:1346918 PaxDb:Q00577 PeptideAtlas:Q00577
PRIDE:Q00577 Ensembl:ENST00000331327 GeneID:5813 KEGG:hsa:5813
UCSC:uc003lfa.3 CTD:5813 GeneCards:GC05P139473 HGNC:HGNC:9701
MIM:600473 neXtProt:NX_Q00577 PharmGKB:PA34045 eggNOG:NOG312871
HOGENOM:HOG000232132 HOVERGEN:HBG006888 InParanoid:Q00577
OMA:REKRACE OrthoDB:EOG4PRSRB PhylomeDB:Q00577 GenomeRNAi:5813
NextBio:22642 Bgee:Q00577 CleanEx:HS_PURA Genevestigator:Q00577
GermOnline:ENSG00000185129 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 Uniprot:Q00577
Length = 322
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/153 (53%), Positives = 115/153 (75%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K + IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L++SVA +FR +L F ++
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 120
Query: 175 YASLGPPNPDTVP---DDGK--LKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG--- 226
YA LGP P + D+ + LKSE +V++NR+YY+DLKEN RGRFLR+ QT+ RG
Sbjct: 121 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 180
Query: 227 -GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 257
+ Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 181 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 213
Score = 264 (98.0 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 58/157 (36%), Positives = 91/157 (57%)
Query: 277 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NK 326
GG +S++ + +EFRD L D +E + +L + R ++ E N+
Sbjct: 94 GGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENR 153
Query: 327 NFYFDIGQNNRGIYMRVSEVSQTIPR-GGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 384
+Y D+ +N RG ++R+ + P G + Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 154 KYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 213
Query: 385 GGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG + V+NK F+FD+G N G++MRVSE
Sbjct: 214 E--PAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSE 248
Score = 210 (79.0 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 269 QVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV 323
++ QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELPEG + V
Sbjct: 169 RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEE--PAELPEGTSLTV 226
Query: 324 ENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+NK F+FD+G N G++MRVSEV T R+ I +P + +F EE
Sbjct: 227 DNKRFFFDVGSNKYGVFMRVSEVKPTY-----RNSITVPYKVWAKFGHTFCKYSEE 277
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 305 GTEDGGYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIP 362
G GG + E E + + ++NK FY D+ QN +G +++++EV GG +S++ +
Sbjct: 48 GGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGNKSRLTLS 103
Query: 363 AQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NKNFYFDIGQNN 412
+EFRD L D +E + +L + R ++ E N+ +Y D+ +N
Sbjct: 104 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQ 163
Query: 413 RGIYMRVSE 421
RG ++R+ +
Sbjct: 164 RGRFLRIRQ 172
Score = 128 (50.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV-----GADGRRSQ-IFLALSVAEQFRGHL 168
L ++ L +++++Y+D+K+N+RGRF+++ + G + Q I L +FR L
Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 202
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
+ D Y P +P+ L DN+R++ D+ N G F+RVS+ P
Sbjct: 203 AKLIDDYGV--EEEPAELPEGTSL-----TVDNKRFFFDVGSNKYGVFMRVSEVKPTY-- 253
Query: 229 RSQIAIPAQGMIEFRDALTDLLEE 252
R+ I +P + +F EE
Sbjct: 254 RNSITVPYKVWAKFGHTFCKYSEE 277
Score = 126 (49.4 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + +EFRD L D +
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGNKSRLTLSMSVAVEFRDYLGDFI 118
Query: 251 EEF 253
E +
Sbjct: 119 EHY 121
Score = 117 (46.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 7 PPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLR 45
PP+ D+ + LKSE +V++NR+YY+DLKEN RGRFLR
Sbjct: 129 PPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLR 169
Score = 106 (42.4 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K + IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 82 (33.9 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 73 (30.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 10/28 (35%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++Y+D+K+N+RGRF+++
Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRI 170
Score = 60 (26.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
L + +KRF+ DV N+ G F++V+ +
Sbjct: 224 LTVDNKRFFFDVGSNKYGVFMRVSEV 249
>UNIPROTKB|I3LCN6 [details] [associations]
symbol:PURA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032422
"purine-rich negative regulatory element binding" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006268 "DNA unwinding
involved in replication" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005662 "DNA replication factor A complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA] [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=IEA] Pfam:PF04845 GO:GO:0005737 GO:GO:0045892
GO:GO:0007399 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0003700 GO:GO:0003697 GO:GO:0000900 GO:GO:0006268
GO:GO:0005662 GO:GO:0032422 GO:GO:0003691 CTD:5813 OMA:REKRACE
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712
GeneTree:ENSGT00390000015406 EMBL:FP565385 RefSeq:XP_003354344.1
RefSeq:XP_003354345.1 ProteinModelPortal:I3LCN6 SMR:I3LCN6
PRIDE:I3LCN6 Ensembl:ENSSSCT00000023612 GeneID:100625926
KEGG:ssc:100625926 Uniprot:I3LCN6
Length = 322
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/153 (53%), Positives = 115/153 (75%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K + IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L++SVA +FR +L F ++
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 120
Query: 175 YASLGPPNPDTVP---DDGK--LKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG--- 226
YA LGP P + D+ + LKSE +V++NR+YY+DLKEN RGRFLR+ QT+ RG
Sbjct: 121 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 180
Query: 227 -GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 257
+ Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 181 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 213
Score = 264 (98.0 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 58/157 (36%), Positives = 91/157 (57%)
Query: 277 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NK 326
GG +S++ + +EFRD L D +E + +L + R ++ E N+
Sbjct: 94 GGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENR 153
Query: 327 NFYFDIGQNNRGIYMRVSEVSQTIPR-GGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 384
+Y D+ +N RG ++R+ + P G + Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 154 KYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 213
Query: 385 GGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG + V+NK F+FD+G N G++MRVSE
Sbjct: 214 E--PAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSE 248
Score = 210 (79.0 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 269 QVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV 323
++ QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELPEG + V
Sbjct: 169 RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEE--PAELPEGTSLTV 226
Query: 324 ENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+NK F+FD+G N G++MRVSEV T R+ I +P + +F EE
Sbjct: 227 DNKRFFFDVGSNKYGVFMRVSEVKPTY-----RNSITVPYKVWAKFGHTFCKYSEE 277
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 305 GTEDGGYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIP 362
G GG + E E + + ++NK FY D+ QN +G +++++EV GG +S++ +
Sbjct: 48 GGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGNKSRLTLS 103
Query: 363 AQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NKNFYFDIGQNN 412
+EFRD L D +E + +L + R ++ E N+ +Y D+ +N
Sbjct: 104 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQ 163
Query: 413 RGIYMRVSE 421
RG ++R+ +
Sbjct: 164 RGRFLRIRQ 172
Score = 128 (50.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV-----GADGRRSQ-IFLALSVAEQFRGHL 168
L ++ L +++++Y+D+K+N+RGRF+++ + G + Q I L +FR L
Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 202
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
+ D Y P +P+ L DN+R++ D+ N G F+RVS+ P
Sbjct: 203 AKLIDDYGV--EEEPAELPEGTSL-----TVDNKRFFFDVGSNKYGVFMRVSEVKPTY-- 253
Query: 229 RSQIAIPAQGMIEFRDALTDLLEE 252
R+ I +P + +F EE
Sbjct: 254 RNSITVPYKVWAKFGHTFCKYSEE 277
Score = 126 (49.4 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + +EFRD L D +
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGNKSRLTLSMSVAVEFRDYLGDFI 118
Query: 251 EEF 253
E +
Sbjct: 119 EHY 121
Score = 117 (46.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 7 PPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLR 45
PP+ D+ + LKSE +V++NR+YY+DLKEN RGRFLR
Sbjct: 129 PPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLR 169
Score = 106 (42.4 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K + IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 82 (33.9 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 73 (30.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 10/28 (35%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++Y+D+K+N+RGRF+++
Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRI 170
Score = 60 (26.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
L + +KRF+ DV N+ G F++V+ +
Sbjct: 224 LTVDNKRFFFDVGSNKYGVFMRVSEV 249
>MGI|MGI:103079 [details] [associations]
symbol:Pura "purine rich element binding protein A"
species:10090 "Mus musculus" [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005662 "DNA replication factor A complex" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=NAS] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=NAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IDA] [GO:0030154 "cell differentiation" evidence=NAS]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032422 "purine-rich
negative regulatory element binding" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0046332 "SMAD
binding" evidence=IDA] MGI:MGI:103079 Pfam:PF04845 GO:GO:0005737
GO:GO:0006915 GO:GO:0045892 GO:GO:0007399 GO:GO:0030154
GO:GO:0008284 GO:GO:0008283 GO:GO:0043025 GO:GO:0030425
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0003697
GO:GO:0046332 GO:GO:0000900 GO:GO:0031575 GO:GO:0006268
GO:GO:0005662 GO:GO:0032422 GO:GO:0003691 EMBL:U02098 CTD:5813
eggNOG:NOG312871 HOGENOM:HOG000232132 HOVERGEN:HBG006888
OMA:REKRACE OrthoDB:EOG4PRSRB InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 EMBL:AF017631 IPI:IPI00118447 RefSeq:NP_033015.1
UniGene:Mm.231802 UniGene:Mm.482241 ProteinModelPortal:P42669
SMR:P42669 IntAct:P42669 STRING:P42669 PhosphoSite:P42669
UCD-2DPAGE:P42669 PaxDb:P42669 PRIDE:P42669 DNASU:19290
Ensembl:ENSMUST00000051301 GeneID:19290 KEGG:mmu:19290
UCSC:uc008enh.2 GeneTree:ENSGT00390000015406 InParanoid:P42669
NextBio:296222 Bgee:P42669 CleanEx:MM_PURA Genevestigator:P42669
GermOnline:ENSMUSG00000043991 Uniprot:P42669
Length = 321
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 82/153 (53%), Positives = 115/153 (75%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K + IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L++SVA +FR +L F ++
Sbjct: 60 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 119
Query: 175 YASLGPPNPDTVP---DDGK--LKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG--- 226
YA LGP P + D+ + LKSE +V++NR+YY+DLKEN RGRFLR+ QT+ RG
Sbjct: 120 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 179
Query: 227 -GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 257
+ Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 180 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 212
Score = 264 (98.0 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 58/157 (36%), Positives = 91/157 (57%)
Query: 277 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NK 326
GG +S++ + +EFRD L D +E + +L + R ++ E N+
Sbjct: 93 GGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENR 152
Query: 327 NFYFDIGQNNRGIYMRVSEVSQTIPR-GGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 384
+Y D+ +N RG ++R+ + P G + Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 153 KYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 212
Query: 385 GGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG + V+NK F+FD+G N G++MRVSE
Sbjct: 213 E--PAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSE 247
Score = 210 (79.0 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 269 QVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV 323
++ QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELPEG + V
Sbjct: 168 RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEE--PAELPEGTSLTV 225
Query: 324 ENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+NK F+FD+G N G++MRVSEV T R+ I +P + +F EE
Sbjct: 226 DNKRFFFDVGSNKYGVFMRVSEVKPTY-----RNSITVPYKVWAKFGHTFCKYSEE 276
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 305 GTEDGGYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIP 362
G GG + E E + + ++NK FY D+ QN +G +++++EV GG +S++ +
Sbjct: 47 GGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGNKSRLTLS 102
Query: 363 AQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NKNFYFDIGQNN 412
+EFRD L D +E + +L + R ++ E N+ +Y D+ +N
Sbjct: 103 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQ 162
Query: 413 RGIYMRVSE 421
RG ++R+ +
Sbjct: 163 RGRFLRIRQ 171
Score = 128 (50.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV-----GADGRRSQ-IFLALSVAEQFRGHL 168
L ++ L +++++Y+D+K+N+RGRF+++ + G + Q I L +FR L
Sbjct: 142 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 201
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
+ D Y P +P+ L DN+R++ D+ N G F+RVS+ P
Sbjct: 202 AKLIDDYGV--EEEPAELPEGTSL-----TVDNKRFFFDVGSNKYGVFMRVSEVKPTY-- 252
Query: 229 RSQIAIPAQGMIEFRDALTDLLEE 252
R+ I +P + +F EE
Sbjct: 253 RNSITVPYKVWAKFGHTFCKYSEE 276
Score = 126 (49.4 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + +EFRD L D +
Sbjct: 59 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGNKSRLTLSMSVAVEFRDYLGDFI 117
Query: 251 EEF 253
E +
Sbjct: 118 EHY 120
Score = 117 (46.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 7 PPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLR 45
PP+ D+ + LKSE +V++NR+YY+DLKEN RGRFLR
Sbjct: 128 PPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLR 168
Score = 106 (42.4 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K + IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 60 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 90
Score = 82 (33.9 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 59 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 90
Score = 73 (30.8 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 10/28 (35%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++Y+D+K+N+RGRF+++
Sbjct: 142 LKSEFLVRENRKYYMDLKENQRGRFLRI 169
Score = 60 (26.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
L + +KRF+ DV N+ G F++V+ +
Sbjct: 223 LTVDNKRFFFDVGSNKYGVFMRVSEV 248
>UNIPROTKB|Q96QR8 [details] [associations]
symbol:PURB "Transcriptional activator protein Pur-beta"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003690 "double-stranded DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0045637 "regulation of
myeloid cell differentiation" evidence=NAS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005662 "DNA replication factor A
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] Pfam:PF04845
GO:GO:0045892 GO:GO:0003729 GO:GO:0003700 GO:GO:0006351
GO:GO:0003690 GO:GO:0003697 EMBL:CH236960 EMBL:CH471128
GO:GO:0008134 GO:GO:0000900 GO:GO:0005662 GO:GO:0032422
EMBL:AC004854 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 OMA:KENVRGR EMBL:AY039216
EMBL:BC101735 EMBL:BC101737 IPI:IPI00045051 PIR:B45036
RefSeq:NP_150093.1 UniGene:Hs.349150 ProteinModelPortal:Q96QR8
SMR:Q96QR8 IntAct:Q96QR8 STRING:Q96QR8 PhosphoSite:Q96QR8
DMDM:74732688 PaxDb:Q96QR8 PeptideAtlas:Q96QR8 PRIDE:Q96QR8
Ensembl:ENST00000395699 GeneID:5814 KEGG:hsa:5814 UCSC:uc003tme.3
CTD:5814 GeneCards:GC07M044882 H-InvDB:HIX0034001 HGNC:HGNC:9702
HPA:HPA048766 MIM:608887 neXtProt:NX_Q96QR8 PharmGKB:PA34046
InParanoid:Q96QR8 PhylomeDB:Q96QR8 ChiTaRS:PURB GenomeRNAi:5814
NextBio:22646 Bgee:Q96QR8 CleanEx:HS_PURB Genevestigator:Q96QR8
GermOnline:ENSG00000146676 GO:GO:0045637 Uniprot:Q96QR8
Length = 312
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 117/302 (38%), Positives = 161/302 (53%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K L IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L+++VA +FR L F ++
Sbjct: 34 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFIEH 93
Query: 175 YASLGPPNPDTVP---DDG-----KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG 226
YA LGP +P+ + ++G LKSE +V++NR+YYLDLKEN RGRFLR+ QT+ RG
Sbjct: 94 YAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRG 153
Query: 227 GPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQIAI- 285
G A P G ++ T L G + + L+ GG ++A
Sbjct: 154 GGGFG-AGPGPGGLQ--SGQTIALPAQGLIEFRDALAKLIDDY-------GGEDDELAGG 203
Query: 286 PAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 345
P G G GG GELPEG + V++K F+FD+G N G+++RVSE
Sbjct: 204 PGGGA--------------GGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSE 249
Query: 346 VSQ------TIPR---GGPRSQIAIPAQGMIEFRDALTD-LLEEFGTEDGGYKGELPEGR 395
V T+P G A M E ++ D L E G GG GE EG
Sbjct: 250 VKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQERQRDKLYERRGGGSGG--GEESEGE 307
Query: 396 HM 397
+
Sbjct: 308 EV 309
Score = 174 (66.3 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 40/87 (45%), Positives = 54/87 (62%)
Query: 351 PRGGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED---------------GGYKGELPEG 394
P G Q IA+PAQG+IEFRDAL L++++G ED GG GELPEG
Sbjct: 163 PGGLQSGQTIALPAQGLIEFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEG 222
Query: 395 RHMRVENKNFYFDIGQNNRGIYMRVSE 421
+ V++K F+FD+G N G+++RVSE
Sbjct: 223 TSITVDSKRFFFDVGCNKYGVFLRVSE 249
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 36/128 (28%), Positives = 66/128 (51%)
Query: 309 GGYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGM 366
GG + E E + + ++NK FY D+ QN +G +++++EV GG +S++ +
Sbjct: 25 GGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGSKSRLTLSMAVA 80
Query: 367 IEFRDALTDLLEEF-------------GTEDGGYKGELPEGRHMRVENKNFYFDIGQNNR 413
EFRD+L D +E + G E+GG + + EN+ +Y D+ +N R
Sbjct: 81 AEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQR 140
Query: 414 GIYMRVSE 421
G ++R+ +
Sbjct: 141 GRFLRIRQ 148
Score = 128 (50.1 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 36/114 (31%), Positives = 64/114 (56%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + EFRD+L D +
Sbjct: 33 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGSKSRLTLSMAVAAEFRDSLGDFI 91
Query: 251 EEFGTEDGGYKVLSLVPHQVSQTIPRGG-PRSQIAIPAQGMI-EFRDALTDLLE 302
E + + G P Q++ GG PR A+ ++ ++ E R DL E
Sbjct: 92 EHYA-QLGPSS-----PEQLAAGAEEGGGPRR--ALKSEFLVRENRKYYLDLKE 137
Score = 114 (45.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LKSE +V++NR+YYLDLKEN RGRFLR
Sbjct: 119 LKSEFLVRENRKYYLDLKENQRGRFLR 145
Score = 109 (43.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K L IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 34 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 64
Score = 83 (34.3 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 33 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 64
Score = 75 (31.5 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++YLD+K+N+RGRF+++
Sbjct: 119 LKSEFLVRENRKYYLDLKENQRGRFLRI 146
Score = 59 (25.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
+ + SKRF+ DV N+ G F++V+ +
Sbjct: 225 ITVDSKRFFFDVGCNKYGVFLRVSEV 250
>MGI|MGI:1338779 [details] [associations]
symbol:Purb "purine rich element binding protein B"
species:10090 "Mus musculus" [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005662 "DNA
replication factor A complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=NAS] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0032422 "purine-rich negative regulatory element
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0046332 "SMAD
binding" evidence=IDA] MGI:MGI:1338779 Pfam:PF04845 GO:GO:0006915
GO:GO:0045892 GO:GO:0030154 GO:GO:0008283 GO:GO:0003729
GO:GO:0003700 GO:GO:0006351 GO:GO:0003697 GO:GO:0046332
GO:GO:0000900 GO:GO:0006268 GO:GO:0005662 GO:GO:0032422
EMBL:AL646020 GO:GO:0003691 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 GeneTree:ENSGT00390000015406
OMA:KENVRGR CTD:5814 ChiTaRS:PURB EMBL:AF017630 IPI:IPI00128867
RefSeq:NP_035351.1 UniGene:Mm.390332 ProteinModelPortal:O35295
SMR:O35295 IntAct:O35295 STRING:O35295 PhosphoSite:O35295
PaxDb:O35295 PRIDE:O35295 DNASU:19291 Ensembl:ENSMUST00000179343
GeneID:19291 KEGG:mmu:19291 UCSC:uc007hys.1 InParanoid:O35295
NextBio:296226 Bgee:O35295 CleanEx:MM_PURB Genevestigator:O35295
GermOnline:ENSMUSG00000049647 Uniprot:O35295
Length = 324
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 100/241 (41%), Positives = 140/241 (58%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K L IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L+++VA +FR L F ++
Sbjct: 46 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFIEH 105
Query: 175 YASLGPPNPDTVP---DDG-----KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG 226
YA LGP +P+ + ++G LKSE +V++NR+YYLDLKEN RGRFLR+ QT+ RG
Sbjct: 106 YAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRG 165
Query: 227 GPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQIAI- 285
G P G ++ T L G + + L+ GG ++A
Sbjct: 166 GGGFGGG-PGPGGLQ--SGQTIALPAQGLIEFRDALAKLIDDY-------GGDEDELAGG 215
Query: 286 PAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 345
P G G GG GELPEG + V++K F+FD+G N G+++RVSE
Sbjct: 216 PGGGA--------------GGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSE 261
Query: 346 V 346
V
Sbjct: 262 V 262
Score = 168 (64.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 40/87 (45%), Positives = 54/87 (62%)
Query: 351 PRGGPRSQ-IAIPAQGMIEFRDALTDLLEEFG-TED--------------GGYKGELPEG 394
P G Q IA+PAQG+IEFRDAL L++++G ED GG GELPEG
Sbjct: 175 PGGLQSGQTIALPAQGLIEFRDALAKLIDDYGGDEDELAGGPGGGAGGPGGGLYGELPEG 234
Query: 395 RHMRVENKNFYFDIGQNNRGIYMRVSE 421
+ V++K F+FD+G N G+++RVSE
Sbjct: 235 TSITVDSKRFFFDVGCNKYGVFLRVSE 261
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 319 RHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLE 378
+ + ++NK FY D+ QN +G +++++EV GG +S++ + EFRD+L D +E
Sbjct: 49 KRLDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGSKSRLTLSMAVAAEFRDSLGDFIE 104
Query: 379 EF-------------GTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
+ G E+GG + + EN+ +Y D+ +N RG ++R+ +
Sbjct: 105 HYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQ 160
Score = 130 (50.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 179 GPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQG 238
G P + +L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ +
Sbjct: 33 GGGGPGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGSKSRLTLSMAV 91
Query: 239 MIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGG-PRSQIAIPAQGMI-EFRDA 296
EFRD+L D +E + + G P Q++ GG PR A+ ++ ++ E R
Sbjct: 92 AAEFRDSLGDFIEHYA-QLGPSS-----PEQLAAGAEEGGGPRR--ALKSEFLVRENRKY 143
Query: 297 LTDLLE 302
DL E
Sbjct: 144 YLDLKE 149
Score = 114 (45.2 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LKSE +V++NR+YYLDLKEN RGRFLR
Sbjct: 131 LKSEFLVRENRKYYLDLKENQRGRFLR 157
Score = 109 (43.4 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K L IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 46 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 76
Score = 85 (35.0 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 6 GPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
G P + +L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 33 GGGGPGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 76
Score = 75 (31.5 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++YLD+K+N+RGRF+++
Sbjct: 131 LKSEFLVRENRKYYLDLKENQRGRFLRI 158
Score = 65 (27.9 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 200 DNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 252
D++R++ D+ N G FLRVS+ P R+ I +P + +F A +E
Sbjct: 240 DSKRFFFDVGCNKYGVFLRVSEVKP--SYRNAITVPFKAWGKFGGAFCRYADE 290
Score = 59 (25.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
+ + SKRF+ DV N+ G F++V+ +
Sbjct: 237 ITVDSKRFFFDVGCNKYGVFLRVSEV 262
>UNIPROTKB|Q9MYX6 [details] [associations]
symbol:Q9MYX6 "DNA binding protein pur-alpha" species:9940
"Ovis aries" [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005662 "DNA replication factor A complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007399
"nervous system development" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046332 "SMAD binding" evidence=ISS] Pfam:PF04845 GO:GO:0005737
GO:GO:0045892 GO:GO:0007399 GO:GO:0008284 GO:GO:0003700
GO:GO:0003697 GO:GO:0046332 GO:GO:0008134 GO:GO:0005662
GO:GO:0003691 CTD:5813 HOVERGEN:HBG006888 InterPro:IPR006628
PANTHER:PTHR12611 SMART:SM00712 EMBL:AF282406 RefSeq:NP_001009447.1
UniGene:Oar.1098 GeneID:443494 Uniprot:Q9MYX6
Length = 321
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 81/153 (52%), Positives = 114/153 (74%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K + IQ+KRFYLDVKQN +GRF+K+AEVGA G ++ + L++SVA +FR +L F ++
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKT-LTLSMSVAVEFRDYLGDFIEH 119
Query: 175 YASLGPPNPDTVP---DDGK--LKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG--- 226
YA LGP P + D+ + LKSE +V++NR+YY+DLKEN RGRFLR+ QT+ RG
Sbjct: 120 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 179
Query: 227 -GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 257
+ Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 180 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 212
Score = 251 (93.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 57/157 (36%), Positives = 90/157 (57%)
Query: 277 GGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NK 326
GG ++ + + +EFRD L D +E + +L + R ++ E N+
Sbjct: 94 GGNKT-LTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENR 152
Query: 327 NFYFDIGQNNRGIYMRVSEVSQTIPR-GGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED 384
+Y D+ +N RG ++R+ + P G + Q IA+PAQG+IEFRDAL L++++G E+
Sbjct: 153 KYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE 212
Query: 385 GGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG + V+NK F+FD+G N G++MRVSE
Sbjct: 213 E--PAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSE 247
Score = 210 (79.0 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 48/116 (41%), Positives = 69/116 (59%)
Query: 269 QVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRV 323
++ QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELPEG + V
Sbjct: 168 RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEE--PAELPEGTSLTV 225
Query: 324 ENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+NK F+FD+G N G++MRVSEV T R+ I +P + +F EE
Sbjct: 226 DNKRFFFDVGSNKYGVFMRVSEVKPTY-----RNSITVPYKVWAKFGHTFCKYSEE 276
Score = 133 (51.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 34/129 (26%), Positives = 65/129 (50%)
Query: 305 GTEDGGYKGELPE--GRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIP 362
G GG + E E + + ++NK FY D+ QN +G +++++EV GG ++ + +
Sbjct: 48 GGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGNKT-LTLS 102
Query: 363 AQGMIEFRDALTDLLEEFGTEDGGYKGELPEG-----RHMRVE-----NKNFYFDIGQNN 412
+EFRD L D +E + +L + R ++ E N+ +Y D+ +N
Sbjct: 103 MSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQ 162
Query: 413 RGIYMRVSE 421
RG ++R+ +
Sbjct: 163 RGRFLRIRQ 171
Score = 128 (50.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV-----GADGRRSQ-IFLALSVAEQFRGHL 168
L ++ L +++++Y+D+K+N+RGRF+++ + G + Q I L +FR L
Sbjct: 142 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDAL 201
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
+ D Y P +P+ L DN+R++ D+ N G F+RVS+ P
Sbjct: 202 AKLIDDYGV--EEEPAELPEGTSL-----TVDNKRFFFDVGSNKYGVFMRVSEVKPTY-- 252
Query: 229 RSQIAIPAQGMIEFRDALTDLLEE 252
R+ I +P + +F EE
Sbjct: 253 RNSITVPYKVWAKFGHTFCKYSEE 276
Score = 117 (46.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 7 PPNPDTVPDDGK--LKSEVMVKDNRRYYLDLKENTRGRFLR 45
PP+ D+ + LKSE +V++NR+YY+DLKEN RGRFLR
Sbjct: 128 PPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLR 168
Score = 113 (44.8 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG ++ + + +EFRD L D +
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGNKT-LTLSMSVAVEFRDYLGDFI 117
Query: 251 EEF 253
E +
Sbjct: 118 EHY 120
Score = 106 (42.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K + IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 82 (33.9 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAEV 91
Score = 73 (30.8 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 10/28 (35%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++Y+D+K+N+RGRF+++
Sbjct: 142 LKSEFLVRENRKYYMDLKENQRGRFLRI 169
Score = 60 (26.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
L + +KRF+ DV N+ G F++V+ +
Sbjct: 223 LTVDNKRFFFDVGSNKYGVFMRVSEV 248
>RGD|1559465 [details] [associations]
symbol:Purb "purine rich element binding protein B"
species:10116 "Rattus norvegicus" [GO:0000900 "translation
repressor activity, nucleic acid binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003729 "mRNA binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005662 "DNA
replication factor A complex" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISS] [GO:0032422
"purine-rich negative regulatory element binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046332 "SMAD binding" evidence=ISO]
RGD:1559465 Pfam:PF04845 GO:GO:0045892 GO:GO:0003729 GO:GO:0003700
GO:GO:0006351 GO:GO:0003690 GO:GO:0003697 GO:GO:0008134
GO:GO:0000900 GO:GO:0005662 GO:GO:0032422 eggNOG:NOG312871
HOGENOM:HOG000232132 HOVERGEN:HBG006888 OrthoDB:EOG4PRSRB
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712 CTD:5814
EMBL:AB182574 IPI:IPI00189358 RefSeq:NP_001017503.1
UniGene:Rn.156213 STRING:Q68A21 PhosphoSite:Q68A21 PRIDE:Q68A21
GeneID:498407 KEGG:rno:498407 UCSC:RGD:1559465 InParanoid:Q68A21
NextBio:699705 ArrayExpress:Q68A21 Genevestigator:Q68A21
GermOnline:ENSRNOG00000007042 Uniprot:Q68A21
Length = 315
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 100/241 (41%), Positives = 140/241 (58%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K L IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L+++VA +FR L F ++
Sbjct: 37 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFIEH 96
Query: 175 YASLGPPNPDTVP---DDG-----KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG 226
YA LGP +P+ + ++G LKSE +V++NR+YYLDLKEN RGRFLR+ QT+ RG
Sbjct: 97 YAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRG 156
Query: 227 GPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQIAI- 285
G P G ++ T L G + + L+ GG ++A
Sbjct: 157 GGGFGGG-PGPGGLQ--SGQTIALPAQGLIEFRDALAKLIDDY-------GGEDDELAGG 206
Query: 286 PAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 345
P G G GG GELPEG + V++K F+FD+G N G+++RVSE
Sbjct: 207 PGGGA--------------GGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGVFLRVSE 252
Query: 346 V 346
V
Sbjct: 253 V 253
Score = 174 (66.3 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 40/87 (45%), Positives = 54/87 (62%)
Query: 351 PRGGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTED---------------GGYKGELPEG 394
P G Q IA+PAQG+IEFRDAL L++++G ED GG GELPEG
Sbjct: 166 PGGLQSGQTIALPAQGLIEFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEG 225
Query: 395 RHMRVENKNFYFDIGQNNRGIYMRVSE 421
+ V++K F+FD+G N G+++RVSE
Sbjct: 226 TSITVDSKRFFFDVGCNKYGVFLRVSE 252
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 319 RHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLE 378
+ + ++NK FY D+ QN +G +++++EV GG +S++ + EFRD+L D +E
Sbjct: 40 KRLDIQNKRFYLDVKQNAKGRFLKIAEVGA----GGSKSRLTLSMAVAAEFRDSLGDFIE 95
Query: 379 EF-------------GTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
+ G E+GG + + EN+ +Y D+ +N RG ++R+ +
Sbjct: 96 HYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQ 151
Score = 131 (51.2 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 176 ASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIP 235
A G P + +L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ +
Sbjct: 21 APRGGGGPGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGSKSRLTLS 79
Query: 236 AQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGG-PRSQIAIPAQGMI-EF 293
EFRD+L D +E + + G P Q++ GG PR A+ ++ ++ E
Sbjct: 80 MAVAAEFRDSLGDFIEHYA-QLGPSS-----PEQLAAGAEEGGGPRR--ALKSEFLVREN 131
Query: 294 RDALTDLLE 302
R DL E
Sbjct: 132 RKYYLDLKE 140
Score = 114 (45.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LKSE +V++NR+YYLDLKEN RGRFLR
Sbjct: 122 LKSEFLVRENRKYYLDLKENQRGRFLR 148
Score = 109 (43.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K L IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 37 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 67
Score = 85 (35.0 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 6 GPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
G P + +L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 24 GGGGPGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 67
Score = 75 (31.5 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++YLD+K+N+RGRF+++
Sbjct: 122 LKSEFLVRENRKYYLDLKENQRGRFLRI 149
Score = 65 (27.9 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 200 DNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 252
D++R++ D+ N G FLRVS+ P R+ I +P + +F A +E
Sbjct: 231 DSKRFFFDVGCNKYGVFLRVSEVKP--SYRNAITVPFKAWGKFGGAFCRYADE 281
Score = 59 (25.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
+ + SKRF+ DV N+ G F++V+ +
Sbjct: 228 ITVDSKRFFFDVGCNKYGVFLRVSEV 253
>UNIPROTKB|H9L298 [details] [associations]
symbol:H9L298 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0005662 "DNA replication factor A
complex" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046332 "SMAD binding"
evidence=IEA] Pfam:PF04845 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 GeneTree:ENSGT00390000015406 EMBL:AADN02054251
EMBL:AADN02053424 EMBL:AADN02053725 EMBL:AADN02054007
EMBL:AADN02054250 Ensembl:ENSGALT00000035815 Uniprot:H9L298
Length = 274
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 98/245 (40%), Positives = 137/245 (55%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K L IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L+++VA +FR +L F ++
Sbjct: 34 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDYLGDFIEH 93
Query: 175 YASLGPPNPDTV-----P--DDG------KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQ 221
YA LGP +P+ + P D+G LKSE +V++NR+YYLDLKEN RGRFLR+ Q
Sbjct: 94 YAQLGPSSPEQLAQAAGPGGDEGGSGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQ 153
Query: 222 TIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRS 281
T+ RG P P G + T L G + + L+ GG
Sbjct: 154 TVNRG-PGGPGGFPG-GPPGLQSGQTIALPAQGLIEFRDALAKLIDDY-------GGEED 204
Query: 282 QIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYM 341
++ P G G GG GELPEG + V++K F F++G N G+++
Sbjct: 205 ELGGPGGG---------------GPGGGGLYGELPEGTSITVDSKRF-FEVGCNKYGVFL 248
Query: 342 RVSEV 346
RV V
Sbjct: 249 RVKGV 253
Score = 186 (70.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 48/139 (34%), Positives = 73/139 (52%)
Query: 305 GTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRG------GPRS- 357
G E G + + EN+ +Y D+ +N RG ++R+ + P G GP
Sbjct: 113 GDEGGSGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGPGGPGGFPGGPPGL 172
Query: 358 ----QIAIPAQGMIEFRDALTDLLEEFGTED-------------GGYKGELPEGRHMRVE 400
IA+PAQG+IEFRDAL L++++G E+ GG GELPEG + V+
Sbjct: 173 QSGQTIALPAQGLIEFRDALAKLIDDYGGEEDELGGPGGGGPGGGGLYGELPEGTSITVD 232
Query: 401 NKNFYFDIGQNNRGIYMRV 419
+K F F++G N G+++RV
Sbjct: 233 SKRF-FEVGCNKYGVFLRV 250
Score = 127 (49.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 179 GP-PNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQ 237
GP P + +L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ +
Sbjct: 20 GPGAGPGPEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGSKSRLTLSMA 78
Query: 238 GMIEFRDALTDLLEEF 253
EFRD L D +E +
Sbjct: 79 VAAEFRDYLGDFIEHY 94
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LKSE +V++NR+YYLDLKEN RGRFLR
Sbjct: 124 LKSEFLVRENRKYYLDLKENQRGRFLR 150
Score = 109 (43.4 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K L IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 34 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 64
Score = 87 (35.7 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 6 GP-PNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
GP P + +L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 20 GPGAGPGPEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 64
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++YLD+K+N+RGRF+++
Sbjct: 124 LKSEFLVRENRKYYLDLKENQRGRFLRI 151
>UNIPROTKB|G3N0W8 [details] [associations]
symbol:PURB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005662 "DNA replication factor A complex" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] Pfam:PF04845 GO:GO:0045892 GO:GO:0003729
GO:GO:0003700 GO:GO:0003690 GO:GO:0003697 GO:GO:0005662
InterPro:IPR006628 PANTHER:PTHR12611 SMART:SM00712
GeneTree:ENSGT00390000015406 OMA:KENVRGR CTD:5814 EMBL:DAAA02011179
RefSeq:NP_001193561.1 UniGene:Bt.28754 Ensembl:ENSBTAT00000063608
GeneID:504276 KEGG:bta:504276 NextBio:20866591 Uniprot:G3N0W8
Length = 304
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 68/123 (55%), Positives = 93/123 (75%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LA+K L IQ+KRFYLDVKQN +GRF+K+AEVGA G +S++ L+++VA +FR +L F ++
Sbjct: 33 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDYLGDFIEH 92
Query: 175 YASLGPPNPDTVP-----DDG-----KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIP 224
YA LGP +P+ V ++G LKSE +V++NR+YYLDLKEN RGRFLR+ QT+
Sbjct: 93 YAQLGPSSPEQVAAAAGAEEGGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVN 152
Query: 225 RGG 227
RGG
Sbjct: 153 RGG 155
Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 81/251 (32%), Positives = 125/251 (49%)
Query: 191 KLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLL 250
+L S+ + N+R+YLD+K+N +GRFL++++ + GG +S++ + EFRD L D +
Sbjct: 32 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAE-VGAGGSKSRLTLSMAVAAEFRDYLGDFI 90
Query: 251 EEFGTEDGGYKVLSLVPHQVSQTIPR---GGPRSQIAIPAQGMI-EFRDALTDLLEEFGT 306
E + ++ P QV+ GGPR A+ ++ ++ E R DL E
Sbjct: 91 EHYA------QLGPSSPEQVAAAAGAEEGGGPRR--ALKSEFLVRENRKYYLDLKEN--- 139
Query: 307 EDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQ-IAIPAQG 365
GR +R+ + G G P G Q IA+PAQG
Sbjct: 140 ---------QRGRFLRIRQT---VNRGGGGPG------------PGGLQSGQTIALPAQG 175
Query: 366 MIEFRDALTDLLEEFGTED---------------GGYKGELPEGRHMRVENKNFYFDIGQ 410
+IEFRDAL L++++G ED GG GELPEG + V++K F+FD+G
Sbjct: 176 LIEFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGC 235
Query: 411 NNRGIYMRVSE 421
N G+++RVSE
Sbjct: 236 NKYGVFLRVSE 246
Score = 184 (69.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 58/171 (33%), Positives = 85/171 (49%)
Query: 226 GGPRSQIAIPAQGMI-EFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQ-I 283
GGPR A+ ++ ++ E R DL E ++ V P G Q I
Sbjct: 114 GGPRR--ALKSEFLVRENRKYYLDLKEN--QRGRFLRIRQTVNRGGGGPGPGGLQSGQTI 169
Query: 284 AIPAQGMIEFRDALTDLLEEFGTED---------------GGYKGELPEGRHMRVENKNF 328
A+PAQG+IEFRDAL L++++G ED GG GELPEG + V++K F
Sbjct: 170 ALPAQGLIEFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRF 229
Query: 329 YFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 379
+FD+G N G+++RVSEV + R+ I +P + +F A +E
Sbjct: 230 FFDVGCNKYGVFLRVSEVKPSY-----RNAITVPFKAWGKFGGAFCRYADE 275
Score = 114 (45.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LKSE +V++NR+YYLDLKEN RGRFLR
Sbjct: 120 LKSEFLVRENRKYYLDLKENQRGRFLR 146
Score = 109 (43.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNI 99
LA+K L IQ+KRFYLDVKQN +GRF+K+ +
Sbjct: 33 LASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 63
Score = 83 (34.3 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + N+R+YLD+K+N +GRFL+ A+V
Sbjct: 32 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAEV 63
Score = 75 (31.5 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 11/28 (39%), Positives = 24/28 (85%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKV 96
L ++ L +++++YLD+K+N+RGRF+++
Sbjct: 120 LKSEFLVRENRKYYLDLKENQRGRFLRI 147
Score = 71 (30.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 120 LQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSD 173
+ + SKRF+ DV N+ G F++V+EV R+ I + +F G ++D
Sbjct: 222 ITVDSKRFFFDVGCNKYGVFLRVSEV-KPSYRNAITVPFKAWGKFGGAFCRYAD 274
Score = 65 (27.9 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 200 DNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEE 252
D++R++ D+ N G FLRVS+ P R+ I +P + +F A +E
Sbjct: 225 DSKRFFFDVGCNKYGVFLRVSEVKP--SYRNAITVPFKAWGKFGGAFCRYADE 275
Score = 59 (25.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 74 LQIQSKRFYLDVKQNRRGRFIKVNNI 99
+ + SKRF+ DV N+ G F++V+ +
Sbjct: 222 ITVDSKRFFFDVGCNKYGVFLRVSEV 247
>MGI|MGI:1922279 [details] [associations]
symbol:Purg "purine-rich element binding protein G"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:1922279 Pfam:PF04845 GO:GO:0005634 GO:GO:0003677
eggNOG:NOG312871 HOGENOM:HOG000232132 HOVERGEN:HBG006888
OrthoDB:EOG4PRSRB InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 GeneTree:ENSGT00390000015406 CTD:29942 OMA:FGHTLGQ
EMBL:AF479672 EMBL:AF479673 EMBL:BC116406 IPI:IPI00153880
IPI:IPI00408500 RefSeq:NP_001091703.1 RefSeq:NP_690034.1
UniGene:Mm.159402 ProteinModelPortal:Q8R4E6 SMR:Q8R4E6
PhosphoSite:Q8R4E6 PaxDb:Q8R4E6 PRIDE:Q8R4E6
Ensembl:ENSMUST00000070340 Ensembl:ENSMUST00000078058 GeneID:75029
KEGG:mmu:75029 UCSC:uc009ljx.1 UCSC:uc009ljy.1 InParanoid:Q8R4E6
NextBio:342048 Bgee:Q8R4E6 CleanEx:MM_PURG Genevestigator:Q8R4E6
GermOnline:ENSMUSG00000049184 Uniprot:Q8R4E6
Length = 350
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 103/305 (33%), Positives = 148/305 (48%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEV--GA---DG-RRSQIFLALSVAEQFRGHL 168
LA+K + IQ KRFYLDVKQ+ RGRF+K+AEV G D R+S++ L+LSVA + + L
Sbjct: 63 LASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCL 122
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGP 228
F ++YA LG + G+ K +V +RR R + S + G
Sbjct: 123 GDFIEHYAHLGLKGHRQ--EHGQSKEQV----SRR---------RQKHSAPSPPVSVGSE 167
Query: 229 RSQIAIPAQGMIEFRDALTDLLEEFGTEDGGY-KVLSLVPHQVSQTIPRG---GPRSQIA 284
++ IE RD L+ + G + ++ + G G I
Sbjct: 168 EHPHSVLKTDYIE-RDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQDQTIV 226
Query: 285 IPAQGMIEFRDALTDLLEEFGTEDGGYK--G-----ELPEGRHMRVENKNFYFDIGQNNR 337
+PAQGMIEFRDAL L+E++G D + G ELPEG RV+NK FYFD+G N
Sbjct: 227 LPAQGMIEFRDALVQLIEDYGEGDIEERRCGDDDPLELPEGTSFRVDNKRFYFDVGSNKY 286
Query: 338 GIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHM 397
GI+++VSEV R R+ I +P + F + EE +K + +GR
Sbjct: 287 GIFLKVSEV-----RPPYRNTITVPFKAWTRFGENFIKYEEEMRKICNSHKEKRMDGRRA 341
Query: 398 RVENK 402
E +
Sbjct: 342 SGEEQ 346
Score = 270 (100.1 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 83/273 (30%), Positives = 136/273 (49%)
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQT-IPRGG 227
S + Y AS P + +L S+ + +R+YLD+K+++RGRFL++++ I RG
Sbjct: 40 SHYPHYSASATPNQSGGTSEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGR 99
Query: 228 P----RSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQI 283
+S++ + E +D L D +E Y L L H+ G + Q+
Sbjct: 100 QDNIRKSKLTLSLSVAAELKDCLGDFIEH-------YAHLGLKGHRQEH----GQSKEQV 148
Query: 284 AIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRV 343
+ Q + + G+E+ + + + ++ +N+ +Y D+ +N RG ++R+
Sbjct: 149 SRRRQ-----KHSAPSPPVSVGSEE--HPHSVLKTDYIERDNRKYYLDLKENQRGRFLRI 201
Query: 344 SEVSQ--TIPRG------GPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYK--G---- 389
+ T G G I +PAQGMIEFRDAL L+E++G D + G
Sbjct: 202 RQTMMRGTGMIGYFGHSLGQDQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRCGDDDP 261
Query: 390 -ELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG RV+NK FYFD+G N GI+++VSE
Sbjct: 262 LELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSE 294
Score = 261 (96.9 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 77/201 (38%), Positives = 107/201 (53%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNIPIAICLNCXXXXXXXLATKMLQIQSKRFY 128
LA+K + IQ KRFYLDVKQ+ RGRF+K+ + I + L + S
Sbjct: 63 LASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIG------RGRQDNIRKSKLTL-SLSVA 115
Query: 129 LDVKQNRRGRFIK-VAEVGADGRRSQIFLALSVAEQFRGHLSAFSDYYASLGPPNPDTVP 187
++K + G FI+ A +G G R + + + R SA S + +P +V
Sbjct: 116 AELK-DCLGDFIEHYAHLGLKGHRQEHGQSKEQVSRRRQKHSAPSPPVSVGSEEHPHSV- 173
Query: 188 DDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG-----------GPRSQIAIPA 236
LK++ + +DNR+YYLDLKEN RGRFLR+ QT+ RG G I +PA
Sbjct: 174 ----LKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQDQTIVLPA 229
Query: 237 QGMIEFRDALTDLLEEFGTED 257
QGMIEFRDAL L+E++G D
Sbjct: 230 QGMIEFRDALVQLIEDYGEGD 250
Score = 105 (42.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LK++ + +DNR+YYLDLKEN RGRFLR
Sbjct: 174 LKTDYIERDNRKYYLDLKENQRGRFLR 200
Score = 66 (28.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 75 QIQSKRFYLDVKQNRRGRFIKVNNI 99
++ +KRFY DV N+ G F+KV+ +
Sbjct: 271 RVDNKRFYFDVGSNKYGIFLKVSEV 295
>WB|WBGene00004046 [details] [associations]
symbol:plp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=IDA] Pfam:PF04845 GO:GO:0005634 GO:GO:0009792
EMBL:FO080446 GO:GO:0043186 GO:GO:0003691 eggNOG:NOG312871
HOGENOM:HOG000232132 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 GeneTree:ENSGT00390000015406 OMA:KENVRGR PIR:T25756
RefSeq:NP_501241.1 ProteinModelPortal:Q94230 SMR:Q94230
IntAct:Q94230 STRING:Q94230 PaxDb:Q94230 EnsemblMetazoa:F45E4.2.1
EnsemblMetazoa:F45E4.2.2 GeneID:177540 KEGG:cel:CELE_F45E4.2
UCSC:F45E4.2.1 CTD:177540 WormBase:F45E4.2 InParanoid:Q94230
NextBio:897268 Uniprot:Q94230
Length = 226
Score = 264 (98.0 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 62/144 (43%), Positives = 90/144 (62%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
LAT L +Q KR+Y+DV +N RGR+IK+AE+G + +S+I L++ A+ +S S
Sbjct: 17 LATHQLTVQYKRYYIDVNENTRGRYIKIAELGTN-YKSRIILSIVAAKAI---VSEISKM 72
Query: 175 YASLGPPNP-DTVPDDGKL-KSEVMVKDNRRYYLDLKENTRGRFLRVSQTI--PRGGPRS 230
A + P+ + P + L KSE + D R++Y+DLKEN RGRFLR++Q PR R
Sbjct: 73 LALIDEPSTGEHAPKESSLIKSETLNVDGRKFYVDLKENVRGRFLRIAQMPMNPRQ-TRQ 131
Query: 231 QIAIPAQGMIEFRDALTDLLEEFG 254
QIAIP+ G+ E LT+ L +FG
Sbjct: 132 QIAIPSDGIAEIHKVLTEYLAKFG 155
Score = 180 (68.4 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 285 IPAQGMIEFRDALTDLLEEFGT-EDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRV 343
+ A+ ++ + L++E T E + L + + V+ + FY D+ +N RG ++R+
Sbjct: 60 VAAKAIVSEISKMLALIDEPSTGEHAPKESSLIKSETLNVDGRKFYVDLKENVRGRFLRI 119
Query: 344 SEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKN 403
+++ PR R QIAIP+ G+ E LT+ L +FG G++ E + ENK+
Sbjct: 120 AQMPMN-PRQ-TRQQIAIPSDGIAEIHKVLTEYLAKFGE---GHEQENTNTPKITAENKS 174
Query: 404 FYFDIGQNNRGIYMRVSE 421
F F G+N+RG ++R+SE
Sbjct: 175 FLFHSGKNDRGEFVRISE 192
Score = 158 (60.7 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 280 RSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGI 339
R QIAIP+ G+ E LT+ L +FG G++ E + ENK+F F G+N+RG
Sbjct: 130 RQQIAIPSDGIAEIHKVLTEYLAKFGE---GHEQENTNTPKITAENKSFLFHSGKNDRGE 186
Query: 340 YMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFG 381
++R+SE+ G R+ I +P +++FR L +++ G
Sbjct: 187 FVRISEIKLN---SGYRNAITVPMSALVDFRKELDNIIANQG 225
Score = 155 (59.6 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 34/140 (24%), Positives = 74/140 (52%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
+ ++ L + ++FY+D+K+N RGRF+++A++ + R+++ +A+ H ++Y
Sbjct: 92 IKSETLNVDGRKFYVDLKENVRGRFLRIAQMPMNPRQTRQQIAIPSDGIAEIH-KVLTEY 150
Query: 175 YASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAI 234
A G + + K+ +E N+ + +N RG F+R+S+ G R+ I +
Sbjct: 151 LAKFGEGHEQENTNTPKITAE-----NKSFLFHSGKNDRGEFVRISEIKLNSGYRNAITV 205
Query: 235 PAQGMIEFRDALTDLLEEFG 254
P +++FR L +++ G
Sbjct: 206 PMSALVDFRKELDNIIANQG 225
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 29/123 (23%), Positives = 61/123 (49%)
Query: 301 LEEFGTEDGGYKGELPEGRH-MRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQI 359
+ + E G + E H + V+ K +Y D+ +N RG Y++++E+ S +
Sbjct: 1 MSDGSVERGTKRAEDSLATHQLTVQYKRYYIDVNENTRGRYIKIAELGTNYKSRIILSIV 60
Query: 360 AIPAQGMIEFRDALTDLLEEFGT-EDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMR 418
A A+ ++ + L++E T E + L + + V+ + FY D+ +N RG ++R
Sbjct: 61 A--AKAIVSEISKMLALIDEPSTGEHAPKESSLIKSETLNVDGRKFYVDLKENVRGRFLR 118
Query: 419 VSE 421
+++
Sbjct: 119 IAQ 121
Score = 103 (41.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 7 PPNPDTVPDDGKL-KSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
P + P + L KSE + D R++Y+DLKEN RGRFLR A +
Sbjct: 79 PSTGEHAPKESSLIKSETLNVDGRKFYVDLKENVRGRFLRIAQM 122
Score = 80 (33.2 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 11/33 (33%), Positives = 25/33 (75%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNIPI 101
+ ++ L + ++FY+D+K+N RGRF+++ +P+
Sbjct: 92 IKSETLNVDGRKFYVDLKENVRGRFLRIAQMPM 124
Score = 76 (31.8 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 16 DGKLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+ L + + +RYY+D+ ENTRGR+++ A++
Sbjct: 14 EDSLATHQLTVQYKRYYIDVNENTRGRYIKIAEL 47
Score = 50 (22.7 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 269 QVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFG 305
++S+ G R+ I +P +++FR L +++ G
Sbjct: 189 RISEIKLNSGYRNAITVPMSALVDFRKELDNIIANQG 225
Score = 46 (21.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 71 TKMLQIQSKRFYLDVKQNRRGRFIKVNNIPI 101
T + ++K F +N RG F++++ I +
Sbjct: 165 TPKITAENKSFLFHSGKNDRGEFVRISEIKL 195
>UNIPROTKB|Q9UJV8 [details] [associations]
symbol:PURG "Purine-rich element-binding protein gamma"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF04845 GO:GO:0005634
GO:GO:0003677 eggNOG:NOG312871 HOGENOM:HOG000232132
HOVERGEN:HBG006888 InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 EMBL:AF195513 EMBL:AY077841 EMBL:BC106708
IPI:IPI00002534 IPI:IPI00383017 RefSeq:NP_001015508.1
RefSeq:NP_037489.1 UniGene:Hs.373778 ProteinModelPortal:Q9UJV8
SMR:Q9UJV8 STRING:Q9UJV8 PhosphoSite:Q9UJV8 DMDM:74720969
PaxDb:Q9UJV8 PRIDE:Q9UJV8 Ensembl:ENST00000339382
Ensembl:ENST00000475541 GeneID:29942 KEGG:hsa:29942 UCSC:uc003xim.1
UCSC:uc003xin.3 CTD:29942 GeneCards:GC08M030853 HGNC:HGNC:17930
HPA:HPA047746 neXtProt:NX_Q9UJV8 PharmGKB:PA134879671
InParanoid:Q9UJV8 OMA:FGHTLGQ PhylomeDB:Q9UJV8 GenomeRNAi:29942
NextBio:52597 Bgee:Q9UJV8 CleanEx:HS_PURG Genevestigator:Q9UJV8
GermOnline:ENSG00000172733 Uniprot:Q9UJV8
Length = 347
Score = 272 (100.8 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 84/273 (30%), Positives = 135/273 (49%)
Query: 169 SAFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQT-IPRGG 227
S + Y AS P + +L S+ + +R+YLD+K+++RGRFL++++ I RG
Sbjct: 37 SHYPHYAASATPNQAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGR 96
Query: 228 P----RSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQI 283
+S++ + E +D L D +E Y L L H+ G + Q
Sbjct: 97 QDNIRKSKLTLSLSVAAELKDCLGDFIEH-------YAHLGLKGHRQEH----GHSKEQG 145
Query: 284 AIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRV 343
+ Q + + G+E+ + + + ++ +N+ +Y D+ +N RG ++R+
Sbjct: 146 SRRRQ-----KHSAPSPPVSVGSEE--HPHSVLKTDYIERDNRKYYLDLKENQRGRFLRI 198
Query: 344 SEVSQ--TIPRG------GPRSQIAIPAQGMIEFRDALTDLLEEFGTED-----GGYKG- 389
+ T G G I +PAQGMIEFRDAL L+E++G D GG
Sbjct: 199 RQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRGGDDDP 258
Query: 390 -ELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
ELPEG RV+NK FYFD+G N GI+++VSE
Sbjct: 259 LELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSE 291
Score = 262 (97.3 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 77/201 (38%), Positives = 107/201 (53%)
Query: 69 LATKMLQIQSKRFYLDVKQNRRGRFIKVNNIPIAICLNCXXXXXXXLATKMLQIQSKRFY 128
LA+K + IQ KRFYLDVKQ+ RGRF+K+ + I + L + S
Sbjct: 60 LASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIG------RGRQDNIRKSKLTL-SLSVA 112
Query: 129 LDVKQNRRGRFIK-VAEVGADGRRSQIFLALSVAEQFRGHLSAFSDYYASLGPPNPDTVP 187
++K + G FI+ A +G G R + + + R SA S + +P +V
Sbjct: 113 AELK-DCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSV- 170
Query: 188 DDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRG-----------GPRSQIAIPA 236
LK++ + +DNR+YYLDLKEN RGRFLR+ QT+ RG G I +PA
Sbjct: 171 ----LKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPA 226
Query: 237 QGMIEFRDALTDLLEEFGTED 257
QGMIEFRDAL L+E++G D
Sbjct: 227 QGMIEFRDALVQLIEDYGEGD 247
Score = 205 (77.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 51/125 (40%), Positives = 67/125 (53%)
Query: 278 GPRSQIAIPAQGMIEFRDALTDLLEEFGTED-----GGYKG--ELPEGRHMRVENKNFYF 330
G I +PAQGMIEFRDAL L+E++G D GG ELPEG RV+NK FYF
Sbjct: 217 GQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYF 276
Query: 331 DIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGE 390
D+G N GI+++VSEV R R+ I +P + F + EE +K +
Sbjct: 277 DVGSNKYGIFLKVSEV-----RPPYRNTITVPFKAWTRFGENFIKYEEEMRKICNSHKEK 331
Query: 391 LPEGR 395
+GR
Sbjct: 332 RMDGR 336
Score = 117 (46.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 42/154 (27%), Positives = 70/154 (45%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAE--------VG----ADGRRSQIFLALSVAE 162
L T ++ ++++YLD+K+N+RGRF+++ + +G + G+ I L
Sbjct: 171 LKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMI 230
Query: 163 QFRGHLSAFSDYYASLGPPNPDTVPDDGKLKSEVMVK---DNRRYYLDLKENTRGRFLRV 219
+FR L + Y G DD L+ DN+R+Y D+ N G FL+V
Sbjct: 231 EFRDALVQLIEDYGE-GDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKV 289
Query: 220 SQTIPRGGP-RSQIAIPAQGMIEFRDALTDLLEE 252
S+ P P R+ I +P + F + EE
Sbjct: 290 SEVRP---PYRNTITVPFKAWTRFGENFIKYEEE 320
Score = 105 (42.0 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 19 LKSEVMVKDNRRYYLDLKENTRGRFLR 45
LK++ + +DNR+YYLDLKEN RGRFLR
Sbjct: 171 LKTDYIERDNRKYYLDLKENQRGRFLR 197
Score = 75 (31.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 18 KLKSEVMVKDNRRYYLDLKENTRGRFLRTADV 49
+L S+ + +R+YLD+K+++RGRFL+ A+V
Sbjct: 59 ELASKRVDIQKKRFYLDVKQSSRGRFLKIAEV 90
Score = 66 (28.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 75 QIQSKRFYLDVKQNRRGRFIKVNNI 99
++ +KRFY DV N+ G F+KV+ +
Sbjct: 268 RVDNKRFYFDVGSNKYGIFLKVSEV 292
>TAIR|locus:2045497 [details] [associations]
symbol:PUR ALPHA-1 "AT2G32080" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0006833 "water transport" evidence=RCA] [GO:0006970 "response
to osmotic stress" evidence=RCA] [GO:0007030 "Golgi organization"
evidence=RCA] [GO:0007033 "vacuole organization" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009750
"response to fructose stimulus" evidence=RCA] [GO:0048767 "root
hair elongation" evidence=RCA] Pfam:PF04845 GO:GO:0005634
GO:GO:0005737 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AC006223
eggNOG:NOG312871 OMA:REKRACE InterPro:IPR006628 PANTHER:PTHR12611
SMART:SM00712 EMBL:AF136152 EMBL:AF419556 EMBL:AF446882
EMBL:AY052714 IPI:IPI00536753 IPI:IPI00546693 PIR:G84728
RefSeq:NP_565736.1 RefSeq:NP_850182.1 UniGene:At.25473
ProteinModelPortal:Q9SKZ1 SMR:Q9SKZ1 STRING:Q9SKZ1 PaxDb:Q9SKZ1
PRIDE:Q9SKZ1 DNASU:817768 EnsemblPlants:AT2G32080.1 GeneID:817768
KEGG:ath:AT2G32080 TAIR:At2g32080 HOGENOM:HOG000029731
InParanoid:Q9SKZ1 PhylomeDB:Q9SKZ1 ProtClustDB:CLSN2688621
Genevestigator:Q9SKZ1 Uniprot:Q9SKZ1
Length = 296
Score = 221 (82.9 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 77/245 (31%), Positives = 121/245 (49%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDY 174
L +K LQ++ K FY D+K+N RGR++K++E RS I + S F L F+ Y
Sbjct: 31 LVSKTLQVEHKLFYFDLKENPRGRYLKISEK-TSATRSTIIVPSSGISWF---LDLFN-Y 85
Query: 175 YASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQ-TIPRGGPRSQIA 233
Y + ++ +L S+ + D++ +Y D+ EN RGRFL+VS+ ++ R RS I
Sbjct: 86 YVN---------SEEHELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRN--RSTII 134
Query: 234 IPA-----QGMIEFRDALTDLLEEFG--TEDGGYKVLSLVPHQVSQT----IPRGGPRSQ 282
+PA +G FR+ L ++ E G K H V IP G +
Sbjct: 135 VPAGSSPDEGWAAFRNILAEIHEASGLFVMPNQVKPSDGQEHLVDDVGAGFIPGHGSQQ- 193
Query: 283 IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMR 342
P+ E T ++ G E+ G G + +R + K F+FD+G NNRG ++R
Sbjct: 194 ---PSSS--EHNVDRT--IDSPGQEETGMTGV---SKVIRADQKRFFFDLGNNNRGHFLR 243
Query: 343 VSEVS 347
+SEV+
Sbjct: 244 ISEVA 248
Score = 152 (58.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 41/117 (35%), Positives = 67/117 (57%)
Query: 305 GTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSEVSQTIPRGGPRSQIAIPAQ 364
G GG EL + ++VE+K FYFD+ +N RG Y+++SE + RS I +P+
Sbjct: 21 GGGGGGSDVELVS-KTLQVEHKLFYFDLKENPRGRYLKISEKTSAT-----RSTIIVPSS 74
Query: 365 GMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSE 421
G+ F DL + + + EL + +++++K FYFDIG+N RG +++VSE
Sbjct: 75 GISWF----LDLFNYYVNSE---EHEL-FSKELQLDSKVFYFDIGENRRGRFLKVSE 123
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 16 DGKLKSEVMVKDNRRYYLDLKENTRGRFLR----TADVNLLIIYXXXXXX---------X 62
D +L S+ + +++ +Y DLKEN RGR+L+ T+ II
Sbjct: 28 DVELVSKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYV 87
Query: 63 XXXXXXLATKMLQIQSKRFYLDVKQNRRGRFIKVNNIPIA 102
L +K LQ+ SK FY D+ +NRRGRF+KV+ ++
Sbjct: 88 NSEEHELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVS 127
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 189 DGKLKSEVMVKDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTD 248
D +L S+ + +++ +Y DLKEN RGR+L++S+ RS I +P+ G+ F D
Sbjct: 28 DVELVSKTLQVEHKLFYFDLKENPRGRYLKISEKT--SATRSTIIVPSSGISWFLDLFNY 85
Query: 249 LL--EE---FGTE---DGGYKVLSLVPHQ------VSQ-TIPRGGPRSQIAIPA-----Q 288
+ EE F E D + ++ VS+ ++ R RS I +PA +
Sbjct: 86 YVNSEEHELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRN--RSTIIVPAGSSPDE 143
Query: 289 GMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDIGQNNRGIYMRVSEVSQ 348
G FR+ L ++ E G + + +G+ V+ D+G G
Sbjct: 144 GWAAFRNILAEIHEASGLFVMPNQVKPSDGQEHLVD------DVGA---GF--------- 185
Query: 349 TIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMRVENKNFYFDI 408
IP G + P+ E T ++ G E+ G G + +R + K F+FD+
Sbjct: 186 -IPGHGSQQ----PSSS--EHNVDRT--IDSPGQEETGMTGV---SKVIRADQKRFFFDL 233
Query: 409 GQNNRGIYMRVSE 421
G NNRG ++R+SE
Sbjct: 234 GNNNRGHFLRISE 246
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00067
Identities = 50/195 (25%), Positives = 84/195 (43%)
Query: 115 LATKMLQIQSKRFYLDVKQNRRGRFIKVAEVGADGRRSQIFL-ALSVAEQ----FRGHLS 169
L +K LQ+ SK FY D+ +NRRGRF+KV+E RS I + A S ++ FR L+
Sbjct: 94 LFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILA 153
Query: 170 AFSDYYASLGPPNPDTVPDDGKLKSEVMVKDNRRYYLDL--KENTRGRFLRVSQTIPRGG 227
+ PN P DG+ E +V D ++ + V +TI G
Sbjct: 154 EIHEASGLFVMPN-QVKPSDGQ---EHLVDDVGAGFIPGHGSQQPSSSEHNVDRTIDSPG 209
Query: 228 PRSQIAIPAQGMIEFRDALTDLLEEFGTEDGGYKVLSLVPHQVSQTIPRGGPRSQIAIPA 287
+ + + + R + G + G+ + ++S+ G RS I +P
Sbjct: 210 -QEETGMTGVSKV-IRADQKRFFFDLGNNNRGHFL------RISEVA--GSDRSSIILPL 259
Query: 288 QGMIEFRDALTDLLE 302
G+ +F + + +E
Sbjct: 260 SGLKQFHEVIGHFVE 274
>RGD|1308543 [details] [associations]
symbol:Pura "purine rich element binding protein A"
species:10116 "Rattus norvegicus" [GO:0000900 "translation
repressor activity, nucleic acid binding" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA;ISO]
[GO:0003697 "single-stranded DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005662 "DNA replication factor A
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006268 "DNA unwinding involved in
replication" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA;ISO] [GO:0017148 "negative
regulation of translation" evidence=ISO] [GO:0030425 "dendrite"
evidence=IEA;ISO] [GO:0032422 "purine-rich negative regulatory
element binding" evidence=IEA;ISO] [GO:0043025 "neuronal cell body"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046332 "SMAD
binding" evidence=IEA;ISO] RGD:1308543 Pfam:PF04845 GO:GO:0005737
GO:GO:0045892 GO:GO:0007399 GO:GO:0008284 GO:GO:0043025
GO:GO:0030425 GO:GO:0003700 GO:GO:0006351 GO:GO:0003697
GO:GO:0000900 GO:GO:0006268 GO:GO:0005662 GO:GO:0032422
GO:GO:0003691 eggNOG:NOG312871 HOGENOM:HOG000232132
OrthoDB:EOG4PRSRB InterPro:IPR006628 PANTHER:PTHR12611
IPI:IPI01016564 IntAct:P86252 STRING:P86252 PhosphoSite:P86252
PRIDE:P86252 UCSC:RGD:1308543 ArrayExpress:P86252
Genevestigator:P86252 Uniprot:P86252
Length = 138
Score = 182 (69.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 48/105 (45%), Positives = 64/105 (60%)
Query: 139 FIKVAEVGADGRRSQIFLALSVAEQFRGHLSAFSDYYASLGPPNPDTVPDDGKLKSEVMV 198
F+K+AEVGA G + + L++SVA +FR +L F ++YA LGP P PD +
Sbjct: 1 FLKIAEVGAGGNK--LTLSMSVAVEFRDYLGDFIEHYAQLGPSQP---PDLAQ------A 49
Query: 199 KDNRRYYLDLKENTRGRFLRVSQTIPRGGPRSQIAIPAQGMIEFR 243
+D RYY+DLKEN RG L +Q G IA+PAQG+IEFR
Sbjct: 50 QDEPRYYMDLKENQRGPGLGSTQ-----G--QTIALPAQGLIEFR 87
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/147 (31%), Positives = 76/147 (51%)
Query: 216 FLRVSQTIPRGGPRSQIAIPAQGMIEFRDALTDLLEEFG------------TEDGGYKVL 263
FL++++ + GG +++ + +EFRD L D +E + +D +
Sbjct: 1 FLKIAE-VGAGG--NKLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRYYM 57
Query: 264 SLVPHQVSQTIPRGGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELPEGRHMR 322
L +Q + G + Q IA+PAQG+IEFR L++++G E+ ELPEG +
Sbjct: 58 DLKENQRGPGL--GSTQGQTIALPAQGLIEFR-----LIDDYGVEEE--PAELPEGTSLT 108
Query: 323 VENKNFYFDIGQNNRGIYMRVSEVSQT 349
V+NK F+FD+G N +VSEV T
Sbjct: 109 VDNKRFFFDVGSN------KVSEVKPT 129
Score = 136 (52.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 334 QNNRGIYMRVSEVSQTIPRGGPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP 392
Q+ YM + E + G + Q IA+PAQG+IEFR L++++G E+ ELP
Sbjct: 50 QDEPRYYMDLKENQRGPGLGSTQGQTIALPAQGLIEFR-----LIDDYGVEEE--PAELP 102
Query: 393 EGRHMRVENKNFYFDIGQN 411
EG + V+NK F+FD+G N
Sbjct: 103 EGTSLTVDNKRFFFDVGSN 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.141 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 435 415 0.00081 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 557 (59 KB)
Total size of DFA: 200 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 31.57u 0.08s 31.65t Elapsed: 00:00:15
Total cpu time: 31.59u 0.08s 31.67t Elapsed: 00:00:16
Start: Thu Aug 15 11:23:02 2013 End: Thu Aug 15 11:23:18 2013