BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10510
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00577|PURA_HUMAN Transcriptional activator protein Pur-alpha OS=Homo sapiens GN=PURA
PE=1 SV=2
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 42 YCTVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP 91
+ + QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELP
Sbjct: 167 FLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE--EPAELP 219
>sp|P42669|PURA_MOUSE Transcriptional activator protein Pur-alpha OS=Mus musculus GN=Pura
PE=1 SV=1
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 7/55 (12%)
Query: 42 YCTVSQTIPRG----GPRSQ-IAIPAQGMIEFRDALTDLLEEFGTEDGGYKGELP 91
+ + QT+ RG + Q IA+PAQG+IEFRDAL L++++G E+ ELP
Sbjct: 166 FLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEE--EPAELP 218
>sp|Q9UJV8|PURG_HUMAN Purine-rich element-binding protein gamma OS=Homo sapiens GN=PURG
PE=2 SV=1
Length = 347
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 42 YCTVSQTIPRG-----------GPRSQIAIPAQGMIEFRDALTDLLEEFGTED 83
+ + QT+ RG G I +PAQGMIEFRDAL L+E++G D
Sbjct: 195 FLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEGD 247
>sp|Q8R4E6|PURG_MOUSE Purine-rich element-binding protein gamma OS=Mus musculus GN=Purg
PE=1 SV=1
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 42 YCTVSQTIPRG-----------GPRSQIAIPAQGMIEFRDALTDLLEEFGTED 83
+ + QT+ RG G I +PAQGMIEFRDAL L+E++G D
Sbjct: 198 FLRIRQTMMRGTGMIGYFGHSLGQDQTIVLPAQGMIEFRDALVQLIEDYGEGD 250
>sp|Q68A21|PURB_RAT Transcriptional activator protein Pur-beta OS=Rattus norvegicus
GN=Purb PE=1 SV=3
Length = 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFRDAL L++++G ED
Sbjct: 175 IALPAQGLIEFRDALAKLIDDYGGED 200
>sp|Q6PHK6|PURB_DANRE Transcriptional activator protein Pur-beta OS=Danio rerio GN=purb
PE=2 SV=3
Length = 297
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFRDAL L++++G ED
Sbjct: 170 IALPAQGLIEFRDALAKLIDDYGGED 195
>sp|Q8AVS4|PURBB_XENLA Transcriptional activator protein Pur-beta-B OS=Xenopus laevis
GN=purb-b PE=2 SV=3
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFRDAL L++++G ED
Sbjct: 176 IALPAQGLIEFRDALAKLIDDYGGED 201
>sp|Q6PAC9|PURBA_XENLA Transcriptional activator protein Pur-beta-A OS=Xenopus laevis
GN=purb-a PE=2 SV=3
Length = 323
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFRDAL L++++G ED
Sbjct: 176 IALPAQGLIEFRDALAKLIDDYGGED 201
>sp|Q96QR8|PURB_HUMAN Transcriptional activator protein Pur-beta OS=Homo sapiens GN=PURB
PE=1 SV=3
Length = 312
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFRDAL L++++G ED
Sbjct: 172 IALPAQGLIEFRDALAKLIDDYGGED 197
>sp|O35295|PURB_MOUSE Transcriptional activator protein Pur-beta OS=Mus musculus GN=Purb
PE=1 SV=3
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 23/26 (88%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFRDAL L++++G ++
Sbjct: 184 IALPAQGLIEFRDALAKLIDDYGGDE 209
>sp|P86252|PURA_RAT Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus
norvegicus GN=Pura PE=1 SV=1
Length = 138
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 5/26 (19%)
Query: 58 IAIPAQGMIEFRDALTDLLEEFGTED 83
IA+PAQG+IEFR L++++G E+
Sbjct: 76 IALPAQGLIEFR-----LIDDYGVEE 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,887,268
Number of Sequences: 539616
Number of extensions: 1209025
Number of successful extensions: 1875
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1856
Number of HSP's gapped (non-prelim): 20
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)