Query psy10512
Match_columns 629
No_of_seqs 807 out of 3258
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 20:07:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10512.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10512hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0927|consensus 100.0 3E-112 7E-117 889.8 52.8 608 1-621 1-610 (614)
2 COG0488 Uup ATPase components 100.0 6E-100 1E-104 834.1 58.6 515 87-609 3-527 (530)
3 KOG0062|consensus 100.0 2.2E-97 5E-102 774.1 38.9 501 84-616 77-578 (582)
4 PRK10636 putative ABC transpor 100.0 9.3E-93 2E-97 807.4 64.1 512 87-608 1-518 (638)
5 PLN03073 ABC transporter F fam 100.0 2.5E-90 5.4E-95 789.9 65.4 518 84-609 174-716 (718)
6 PRK11147 ABC transporter ATPas 100.0 6.6E-89 1.4E-93 777.4 63.9 511 87-607 3-528 (635)
7 KOG0066|consensus 100.0 2.3E-88 5.1E-93 689.2 38.7 523 84-616 261-800 (807)
8 PRK15064 ABC transporter ATP-b 100.0 3.7E-85 8E-90 734.0 65.5 517 87-608 1-526 (530)
9 PRK11819 putative ABC transpor 100.0 1E-84 2.2E-89 733.2 67.4 528 87-625 6-551 (556)
10 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.2E-84 1.1E-88 727.4 66.6 528 87-625 4-549 (552)
11 COG1123 ATPase components of v 100.0 1.5E-81 3.2E-86 675.4 44.8 466 87-605 5-517 (539)
12 TIGR03269 met_CoM_red_A2 methy 100.0 1E-79 2.2E-84 688.9 50.2 455 88-607 1-517 (520)
13 PRK13549 xylose transporter AT 100.0 5.2E-80 1.1E-84 688.7 42.7 451 87-605 5-492 (506)
14 PRK10261 glutathione transport 100.0 1.8E-79 3.8E-84 697.9 47.4 489 87-605 12-551 (623)
15 PRK09700 D-allose transporter 100.0 1.2E-79 2.7E-84 686.6 44.3 445 87-598 5-490 (510)
16 PRK15134 microcin C ABC transp 100.0 6.4E-79 1.4E-83 683.4 48.8 458 87-606 5-514 (529)
17 PRK15439 autoinducer 2 ABC tra 100.0 6.4E-79 1.4E-83 679.8 43.0 451 87-606 11-491 (510)
18 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-78 2.6E-83 677.3 44.1 450 88-604 2-489 (500)
19 PRK10762 D-ribose transporter 100.0 1.2E-78 2.6E-83 676.9 42.6 445 87-605 4-482 (501)
20 PRK11288 araG L-arabinose tran 100.0 1.1E-78 2.5E-83 677.1 41.9 448 87-606 4-484 (501)
21 PRK10938 putative molybdenum t 100.0 4.1E-78 8.8E-83 671.4 46.1 450 87-598 3-484 (490)
22 PRK10982 galactose/methyl gala 100.0 1.7E-77 3.8E-82 666.3 42.2 445 90-605 1-478 (491)
23 COG4172 ABC-type uncharacteriz 100.0 8.1E-74 1.7E-78 580.9 40.5 460 87-605 6-514 (534)
24 PRK13409 putative ATPase RIL; 100.0 5.1E-73 1.1E-77 636.8 42.2 441 92-596 78-532 (590)
25 COG1129 MglA ABC-type sugar tr 100.0 5.5E-70 1.2E-74 582.5 39.2 440 87-597 8-481 (500)
26 COG3845 ABC-type uncharacteriz 100.0 2.5E-66 5.4E-71 542.7 38.0 446 87-597 4-483 (501)
27 KOG0055|consensus 100.0 7.8E-64 1.7E-68 572.9 47.2 203 399-607 987-1213(1228)
28 TIGR01257 rim_protein retinal- 100.0 1.1E-60 2.3E-65 581.3 56.3 208 398-609 1936-2161(2272)
29 PTZ00265 multidrug resistance 100.0 3.3E-60 7.3E-65 577.7 52.4 204 399-607 1165-1452(1466)
30 PLN03130 ABC transporter C fam 100.0 5.2E-59 1.1E-63 572.3 55.9 202 399-607 1237-1461(1622)
31 PLN03232 ABC transporter C fam 100.0 8.5E-59 1.8E-63 570.1 55.4 202 399-607 1234-1458(1495)
32 TIGR00957 MRP_assoc_pro multi 100.0 4E-58 8.6E-63 565.0 56.1 202 399-607 1284-1508(1522)
33 PTZ00243 ABC transporter; Prov 100.0 7.9E-57 1.7E-61 552.3 54.9 202 399-607 1308-1533(1560)
34 TIGR01271 CFTR_protein cystic 100.0 3.1E-55 6.8E-60 537.8 54.8 200 399-606 1217-1439(1490)
35 TIGR00956 3a01205 Pleiotropic 100.0 2E-55 4.4E-60 535.4 49.1 200 399-602 759-988 (1394)
36 PLN03140 ABC transporter G fam 100.0 2.6E-53 5.5E-58 515.2 47.9 200 399-602 867-1105(1470)
37 COG1126 GlnQ ABC-type polar am 100.0 3.1E-54 6.8E-59 408.2 22.1 227 87-324 2-231 (240)
38 COG1245 Predicted ATPase, RNas 100.0 3.8E-52 8.2E-57 428.4 31.7 435 92-592 79-531 (591)
39 KOG0054|consensus 100.0 1.7E-50 3.7E-55 473.7 45.3 202 399-607 1138-1362(1381)
40 COG1126 GlnQ ABC-type polar am 100.0 3.5E-50 7.6E-55 380.7 22.4 204 398-607 1-225 (240)
41 COG1125 OpuBA ABC-type proline 100.0 3.3E-48 7.1E-53 374.2 22.9 228 87-326 1-233 (309)
42 COG1135 AbcC ABC-type metal io 100.0 5.4E-48 1.2E-52 383.6 21.5 227 87-323 1-236 (339)
43 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.8E-47 1.3E-51 374.7 23.8 206 397-607 2-227 (254)
44 COG1120 FepC ABC-type cobalami 100.0 3.3E-47 7.2E-52 378.4 19.6 216 87-321 2-231 (258)
45 COG1120 FepC ABC-type cobalami 100.0 4.3E-46 9.3E-51 370.4 23.5 201 399-605 2-226 (258)
46 COG1135 AbcC ABC-type metal io 100.0 7.4E-46 1.6E-50 368.4 21.7 203 399-605 1-229 (339)
47 COG1124 DppF ABC-type dipeptid 100.0 1.9E-45 4.1E-50 355.5 22.7 201 398-598 2-223 (252)
48 COG1127 Ttg2A ABC-type transpo 100.0 8.9E-46 1.9E-50 356.0 19.7 220 86-313 7-230 (263)
49 COG1125 OpuBA ABC-type proline 100.0 1.4E-45 3E-50 356.0 20.8 204 399-607 1-225 (309)
50 COG1127 Ttg2A ABC-type transpo 100.0 4E-45 8.7E-50 351.5 22.2 206 397-607 6-235 (263)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2E-45 4.4E-50 363.7 20.6 219 86-319 3-228 (254)
52 COG3638 ABC-type phosphate/pho 100.0 4.1E-45 8.9E-50 350.5 21.4 213 398-615 2-245 (258)
53 COG1116 TauB ABC-type nitrate/ 100.0 8E-45 1.7E-49 354.6 22.2 193 398-595 2-211 (248)
54 COG1124 DppF ABC-type dipeptid 100.0 6.8E-45 1.5E-49 351.7 20.3 216 86-313 2-226 (252)
55 COG3638 ABC-type phosphate/pho 100.0 1.1E-44 2.4E-49 347.6 21.3 219 86-313 2-232 (258)
56 COG1116 TauB ABC-type nitrate/ 100.0 5.5E-45 1.2E-49 355.7 19.4 201 87-305 3-207 (248)
57 COG3842 PotA ABC-type spermidi 100.0 4.5E-45 9.7E-50 378.5 19.2 223 87-324 5-232 (352)
58 PRK00349 uvrA excinuclease ABC 100.0 2.8E-43 6E-48 408.4 35.1 333 210-607 468-927 (943)
59 COG1136 SalX ABC-type antimicr 100.0 6.7E-44 1.5E-48 348.1 23.9 195 399-596 1-221 (226)
60 PRK00635 excinuclease ABC subu 100.0 5.3E-43 1.1E-47 420.7 35.8 329 215-607 459-906 (1809)
61 COG4555 NatA ABC-type Na+ tran 100.0 1.6E-44 3.5E-49 337.3 17.2 216 87-316 1-220 (245)
62 COG1117 PstB ABC-type phosphat 100.0 2.6E-44 5.6E-49 339.1 18.6 228 87-325 7-244 (253)
63 TIGR00630 uvra excinuclease AB 100.0 1.1E-42 2.4E-47 402.6 34.2 327 215-604 470-922 (924)
64 COG4598 HisP ABC-type histidin 100.0 3.3E-44 7.2E-49 328.7 16.8 239 87-326 6-249 (256)
65 COG2884 FtsE Predicted ATPase 100.0 6.2E-44 1.4E-48 330.7 18.8 197 399-599 1-219 (223)
66 COG1122 CbiO ABC-type cobalt t 100.0 2.7E-43 5.9E-48 350.2 23.7 206 398-607 2-228 (235)
67 COG1136 SalX ABC-type antimicr 100.0 8.3E-44 1.8E-48 347.4 19.5 212 88-308 2-221 (226)
68 COG3839 MalK ABC-type sugar tr 100.0 1.1E-43 2.5E-48 366.1 20.8 219 87-320 3-225 (338)
69 COG1118 CysA ABC-type sulfate/ 100.0 4.5E-44 9.6E-49 354.7 16.9 223 86-320 1-229 (345)
70 COG1122 CbiO ABC-type cobalt t 100.0 1.7E-43 3.7E-48 351.7 17.9 222 86-319 2-229 (235)
71 COG0488 Uup ATPase components 100.0 9E-43 2E-47 382.6 24.5 208 398-611 2-244 (530)
72 PRK13537 nodulation ABC transp 100.0 6E-42 1.3E-46 357.5 26.9 206 396-607 4-227 (306)
73 COG3842 PotA ABC-type spermidi 100.0 1.1E-42 2.4E-47 360.6 20.9 205 397-607 3-226 (352)
74 TIGR02314 ABC_MetN D-methionin 100.0 6.1E-42 1.3E-46 360.7 26.4 204 399-606 1-229 (343)
75 COG2884 FtsE Predicted ATPase 100.0 6.4E-43 1.4E-47 324.0 16.5 215 87-311 1-219 (223)
76 TIGR02314 ABC_MetN D-methionin 100.0 1.5E-42 3.3E-47 365.3 21.4 221 87-317 1-229 (343)
77 TIGR00960 3a0501s02 Type II (G 100.0 4.5E-42 9.8E-47 341.6 23.3 194 399-595 1-216 (216)
78 COG1131 CcmA ABC-type multidru 100.0 8.2E-42 1.8E-46 353.4 25.1 206 398-608 3-227 (293)
79 COG1131 CcmA ABC-type multidru 100.0 2.9E-42 6.2E-47 356.8 21.5 213 87-313 4-221 (293)
80 COG1118 CysA ABC-type sulfate/ 100.0 3.3E-42 7.1E-47 341.5 20.1 202 399-606 2-226 (345)
81 COG3839 MalK ABC-type sugar tr 100.0 5.7E-42 1.2E-46 353.5 22.5 204 398-607 2-223 (338)
82 PRK13537 nodulation ABC transp 100.0 6.5E-42 1.4E-46 357.2 23.1 212 87-312 7-221 (306)
83 cd03261 ABC_Org_Solvent_Resist 100.0 1.6E-41 3.5E-46 342.1 25.1 201 400-606 1-225 (235)
84 cd03261 ABC_Org_Solvent_Resist 100.0 7.1E-42 1.5E-46 344.7 22.1 217 88-315 1-222 (235)
85 COG0411 LivG ABC-type branched 100.0 1.5E-42 3.3E-47 335.7 16.4 222 87-319 4-240 (250)
86 COG4555 NatA ABC-type Na+ tran 100.0 2.4E-42 5.3E-47 322.7 16.8 206 399-609 1-224 (245)
87 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-41 2.4E-46 338.1 22.7 206 88-310 1-212 (213)
88 COG0411 LivG ABC-type branched 100.0 2.6E-42 5.6E-47 334.1 17.6 205 397-607 2-239 (250)
89 PRK13536 nodulation factor exp 100.0 3.1E-41 6.7E-46 356.0 27.1 206 396-607 38-261 (340)
90 COG4161 ArtP ABC-type arginine 100.0 1.2E-41 2.7E-46 306.6 19.9 234 87-327 2-238 (242)
91 PRK11432 fbpC ferric transport 100.0 1.5E-41 3.3E-46 359.4 23.6 216 87-317 6-225 (351)
92 PRK11650 ugpC glycerol-3-phosp 100.0 1.6E-41 3.4E-46 360.3 23.6 216 87-317 3-223 (356)
93 PRK13536 nodulation factor exp 100.0 2.1E-41 4.5E-46 357.3 24.0 213 87-313 41-256 (340)
94 TIGR01288 nodI ATP-binding ABC 100.0 4.2E-41 9.2E-46 351.3 26.2 204 398-607 3-224 (303)
95 TIGR03265 PhnT2 putative 2-ami 100.0 2.2E-41 4.7E-46 358.9 24.1 217 87-318 4-224 (353)
96 TIGR00960 3a0501s02 Type II (G 100.0 1.5E-41 3.3E-46 337.8 21.0 211 87-307 1-216 (216)
97 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-41 5E-46 333.8 22.1 193 401-596 1-205 (205)
98 PRK00635 excinuclease ABC subu 100.0 2.5E-39 5.4E-44 389.2 43.6 185 207-447 785-981 (1809)
99 PRK13643 cbiO cobalt transport 100.0 6.4E-41 1.4E-45 347.3 25.9 206 399-606 1-232 (288)
100 PRK10851 sulfate/thiosulfate t 100.0 1.7E-41 3.8E-46 359.6 22.1 218 86-318 1-226 (353)
101 TIGR01288 nodI ATP-binding ABC 100.0 2.6E-41 5.6E-46 352.9 23.0 213 86-312 3-218 (303)
102 PRK13651 cobalt transporter AT 100.0 2.6E-41 5.7E-46 352.0 23.0 231 87-318 2-254 (305)
103 PRK15079 oligopeptide ABC tran 100.0 7.2E-41 1.6E-45 352.2 26.5 209 397-606 6-250 (331)
104 cd03301 ABC_MalK_N The N-termi 100.0 3.9E-41 8.6E-46 334.1 23.1 209 88-311 1-213 (213)
105 PRK13651 cobalt transporter AT 100.0 6E-41 1.3E-45 349.4 25.5 206 399-606 2-253 (305)
106 PRK11308 dppF dipeptide transp 100.0 9.5E-41 2.1E-45 351.0 27.1 209 397-606 3-243 (327)
107 cd03265 ABC_DrrA DrrA is the A 100.0 5.5E-41 1.2E-45 334.8 23.9 199 400-604 1-218 (220)
108 cd03259 ABC_Carb_Solutes_like 100.0 5.1E-41 1.1E-45 333.3 23.4 193 400-597 1-211 (213)
109 PRK11153 metN DL-methionine tr 100.0 7.8E-41 1.7E-45 354.3 26.3 204 399-606 1-229 (343)
110 PRK11650 ugpC glycerol-3-phosp 100.0 6.5E-41 1.4E-45 355.6 25.7 204 399-607 3-224 (356)
111 cd03296 ABC_CysA_sulfate_impor 100.0 5E-41 1.1E-45 339.3 23.2 212 86-312 1-220 (239)
112 PRK11432 fbpC ferric transport 100.0 8.9E-41 1.9E-45 353.6 26.0 204 397-606 4-225 (351)
113 cd03265 ABC_DrrA DrrA is the A 100.0 4.2E-41 9.2E-46 335.6 22.1 210 88-311 1-214 (220)
114 PRK13647 cbiO cobalt transport 100.0 1.1E-40 2.4E-45 343.2 25.7 204 398-605 3-225 (274)
115 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-40 2.7E-45 356.9 26.8 203 398-606 2-227 (402)
116 PRK09452 potA putrescine/sperm 100.0 6.9E-41 1.5E-45 356.9 24.5 218 86-318 13-234 (375)
117 PRK13637 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 344.4 26.4 206 399-606 2-233 (287)
118 PRK11000 maltose/maltodextrin 100.0 6.8E-41 1.5E-45 357.7 24.4 216 87-317 3-222 (369)
119 PRK13634 cbiO cobalt transport 100.0 1.3E-40 2.8E-45 345.4 25.7 204 400-605 3-233 (290)
120 TIGR02315 ABC_phnC phosphonate 100.0 1.2E-40 2.7E-45 337.3 24.9 202 399-605 1-233 (243)
121 TIGR03258 PhnT 2-aminoethylpho 100.0 6.7E-41 1.4E-45 355.7 23.9 216 87-317 5-227 (362)
122 PRK11831 putative ABC transpor 100.0 1.6E-40 3.5E-45 341.3 26.0 205 397-607 5-233 (269)
123 PRK13641 cbiO cobalt transport 100.0 1.6E-40 3.4E-45 344.4 26.1 206 399-606 2-233 (287)
124 cd03296 ABC_CysA_sulfate_impor 100.0 1.4E-40 3E-45 336.1 25.0 201 399-605 2-224 (239)
125 PRK13631 cbiO cobalt transport 100.0 1.8E-40 3.9E-45 347.8 26.7 208 396-605 18-263 (320)
126 PRK11247 ssuB aliphatic sulfon 100.0 1.7E-40 3.7E-45 338.1 25.6 195 397-597 10-214 (257)
127 cd03256 ABC_PhnC_transporter A 100.0 1.7E-40 3.6E-45 335.9 25.3 202 400-606 1-233 (241)
128 PRK13637 cbiO cobalt transport 100.0 6.7E-41 1.5E-45 347.0 22.9 220 87-316 2-232 (287)
129 PRK10636 putative ABC transpor 100.0 1.5E-40 3.3E-45 379.0 28.0 205 399-608 1-237 (638)
130 TIGR02673 FtsE cell division A 100.0 9.2E-41 2E-45 331.7 22.6 192 399-594 1-214 (214)
131 TIGR02769 nickel_nikE nickel i 100.0 2.1E-40 4.4E-45 339.9 25.7 207 399-606 2-239 (265)
132 cd03266 ABC_NatA_sodium_export 100.0 4.4E-41 9.4E-46 335.0 20.1 209 88-310 2-217 (218)
133 PRK11629 lolD lipoprotein tran 100.0 2.7E-40 5.9E-45 332.7 26.1 197 397-597 3-225 (233)
134 TIGR03265 PhnT2 putative 2-ami 100.0 1.9E-40 4.2E-45 351.6 26.3 204 398-607 3-224 (353)
135 PRK15112 antimicrobial peptide 100.0 1.8E-40 3.9E-45 340.6 25.2 209 398-607 3-239 (267)
136 TIGR03522 GldA_ABC_ATP gliding 100.0 2.5E-40 5.5E-45 345.0 26.5 203 399-607 2-221 (301)
137 PRK13646 cbiO cobalt transport 100.0 2.2E-40 4.7E-45 343.2 25.8 206 399-606 2-234 (286)
138 PRK13638 cbiO cobalt transport 100.0 7.7E-41 1.7E-45 344.2 22.3 219 87-315 1-222 (271)
139 cd03235 ABC_Metallic_Cations A 100.0 8E-41 1.7E-45 331.9 21.6 192 401-595 1-210 (213)
140 PRK13634 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 345.7 23.6 219 87-313 2-230 (290)
141 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-40 2.3E-45 347.8 23.2 215 87-316 2-218 (301)
142 PRK13646 cbiO cobalt transport 100.0 1.6E-40 3.6E-45 344.1 24.4 221 87-315 2-232 (286)
143 cd03263 ABC_subfamily_A The AB 100.0 1.8E-40 3.9E-45 331.0 23.8 201 400-604 1-218 (220)
144 PRK10908 cell division protein 100.0 2.1E-40 4.6E-45 331.0 24.2 195 399-597 1-217 (222)
145 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-40 3.3E-45 335.1 23.3 200 400-605 1-230 (236)
146 PRK11153 metN DL-methionine tr 100.0 7.2E-41 1.6E-45 354.6 21.8 218 87-314 1-226 (343)
147 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.6E-40 5.5E-45 330.0 24.4 195 400-597 1-214 (220)
148 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-40 3.4E-45 331.0 22.7 192 400-595 1-218 (218)
149 PRK13641 cbiO cobalt transport 100.0 1.4E-40 3.1E-45 344.7 23.2 219 87-313 2-229 (287)
150 cd03301 ABC_MalK_N The N-termi 100.0 2.5E-40 5.5E-45 328.3 24.0 193 400-597 1-211 (213)
151 PRK09536 btuD corrinoid ABC tr 100.0 9.6E-41 2.1E-45 357.8 22.5 214 87-313 3-223 (402)
152 PRK10619 histidine/lysine/argi 100.0 4.4E-40 9.5E-45 336.0 26.3 205 397-606 3-240 (257)
153 PRK11701 phnK phosphonate C-P 100.0 3.4E-40 7.4E-45 337.0 25.5 207 397-606 4-240 (258)
154 PRK09452 potA putrescine/sperm 100.0 3.5E-40 7.6E-45 351.5 26.5 205 396-606 11-233 (375)
155 cd03266 ABC_NatA_sodium_export 100.0 2.1E-40 4.7E-45 330.0 23.3 196 399-597 1-216 (218)
156 PRK13636 cbiO cobalt transport 100.0 4.3E-40 9.4E-45 340.4 26.3 207 397-607 3-231 (283)
157 PRK11831 putative ABC transpor 100.0 1.5E-40 3.3E-45 341.5 22.8 217 87-312 7-227 (269)
158 PRK11819 putative ABC transpor 100.0 2.8E-40 6E-45 372.6 26.8 208 397-609 4-252 (556)
159 PRK13643 cbiO cobalt transport 100.0 1.8E-40 3.9E-45 344.0 23.1 221 87-315 1-230 (288)
160 cd03257 ABC_NikE_OppD_transpor 100.0 3E-40 6.6E-45 331.1 24.0 199 399-597 1-226 (228)
161 cd03225 ABC_cobalt_CbiO_domain 100.0 1E-40 2.2E-45 330.7 20.1 205 89-306 1-211 (211)
162 PRK13647 cbiO cobalt transport 100.0 1.7E-40 3.7E-45 341.8 22.5 217 87-317 4-225 (274)
163 PRK11022 dppD dipeptide transp 100.0 4.8E-40 1.1E-44 345.7 26.3 207 399-606 3-242 (326)
164 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.2E-40 6.9E-45 329.3 23.7 205 88-310 1-215 (220)
165 PRK11000 maltose/maltodextrin 100.0 4.8E-40 1E-44 351.2 26.6 202 399-606 3-222 (369)
166 cd03264 ABC_drug_resistance_li 100.0 1.6E-40 3.5E-45 329.3 21.2 208 88-310 1-210 (211)
167 cd03269 ABC_putative_ATPase Th 100.0 1.5E-40 3.2E-45 329.3 20.9 206 88-310 1-209 (210)
168 PRK10851 sulfate/thiosulfate t 100.0 6.1E-40 1.3E-44 347.8 27.0 202 399-606 2-225 (353)
169 TIGR02211 LolD_lipo_ex lipopro 100.0 4E-40 8.6E-45 328.8 24.1 194 399-596 1-220 (221)
170 cd03258 ABC_MetN_methionine_tr 100.0 4.1E-40 8.9E-45 331.4 24.3 203 399-605 1-228 (233)
171 PRK09493 glnQ glutamine ABC tr 100.0 3.1E-40 6.7E-45 333.8 23.5 219 88-317 2-223 (240)
172 PRK11248 tauB taurine transpor 100.0 5.1E-40 1.1E-44 334.8 25.1 194 399-597 1-211 (255)
173 cd03225 ABC_cobalt_CbiO_domain 100.0 2.2E-40 4.7E-45 328.3 21.8 192 401-594 1-211 (211)
174 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-40 2.7E-45 335.8 20.4 212 88-311 1-225 (236)
175 PRK11607 potG putrescine trans 100.0 3.8E-40 8.1E-45 351.8 25.2 217 87-318 19-239 (377)
176 cd03269 ABC_putative_ATPase Th 100.0 4.5E-40 9.8E-45 325.8 23.9 193 400-597 1-208 (210)
177 cd03218 ABC_YhbG The ABC trans 100.0 2.3E-40 4.9E-45 333.0 22.1 212 88-311 1-215 (232)
178 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-40 2.4E-45 332.0 19.5 210 88-307 1-218 (218)
179 PRK11264 putative amino-acid A 100.0 6.2E-40 1.3E-44 333.6 25.3 202 399-606 3-232 (250)
180 PRK09473 oppD oligopeptide tra 100.0 8.5E-40 1.8E-44 344.2 27.1 211 395-606 8-250 (330)
181 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.2E-40 1.3E-44 332.0 25.1 203 400-606 1-224 (242)
182 cd03263 ABC_subfamily_A The AB 100.0 2.3E-40 5E-45 330.3 21.6 210 88-311 1-214 (220)
183 PRK13652 cbiO cobalt transport 100.0 7.9E-40 1.7E-44 337.5 26.2 205 398-606 2-226 (277)
184 cd03262 ABC_HisP_GlnQ_permease 100.0 1.9E-40 4E-45 329.2 20.7 210 88-307 1-213 (213)
185 TIGR03258 PhnT 2-aminoethylpho 100.0 7.1E-40 1.5E-44 347.8 26.3 203 399-607 5-228 (362)
186 PRK15093 antimicrobial peptide 100.0 5.9E-40 1.3E-44 346.0 25.5 208 398-606 2-247 (330)
187 TIGR02323 CP_lyasePhnK phospho 100.0 7.8E-40 1.7E-44 333.5 25.5 206 398-606 2-237 (253)
188 cd03226 ABC_cobalt_CbiO_domain 100.0 8.9E-41 1.9E-45 329.6 18.0 200 89-308 1-205 (205)
189 PRK14250 phosphate ABC transpo 100.0 5.2E-40 1.1E-44 332.2 23.8 214 87-317 3-220 (241)
190 PRK09493 glnQ glutamine ABC tr 100.0 8.5E-40 1.8E-44 330.6 25.3 202 399-606 1-224 (240)
191 TIGR03411 urea_trans_UrtD urea 100.0 1E-39 2.2E-44 330.4 25.8 203 398-606 1-230 (242)
192 PRK09984 phosphonate/organopho 100.0 1E-39 2.2E-44 334.3 26.0 205 397-607 2-242 (262)
193 PRK11264 putative amino-acid A 100.0 3.4E-40 7.4E-45 335.5 22.2 225 87-316 3-230 (250)
194 PRK13649 cbiO cobalt transport 100.0 8.6E-40 1.9E-44 338.0 25.5 206 399-606 2-233 (280)
195 cd03260 ABC_PstB_phosphate_tra 100.0 4.4E-40 9.5E-45 329.8 22.6 197 400-602 1-224 (227)
196 cd03264 ABC_drug_resistance_li 100.0 5.8E-40 1.3E-44 325.2 23.0 192 400-597 1-209 (211)
197 PRK10584 putative ABC transpor 100.0 9.6E-40 2.1E-44 327.6 24.8 197 397-597 4-226 (228)
198 PRK11248 tauB taurine transpor 100.0 7.2E-40 1.6E-44 333.7 24.2 207 87-311 1-213 (255)
199 PRK11247 ssuB aliphatic sulfon 100.0 2.6E-40 5.7E-45 336.7 21.0 202 86-311 11-216 (257)
200 PRK15064 ABC transporter ATP-b 100.0 8.2E-40 1.8E-44 367.2 27.0 205 399-607 1-242 (530)
201 cd03218 ABC_YhbG The ABC trans 100.0 8.4E-40 1.8E-44 328.9 24.2 201 400-606 1-221 (232)
202 cd03258 ABC_MetN_methionine_tr 100.0 4.3E-40 9.4E-45 331.2 22.1 215 88-312 2-224 (233)
203 cd03292 ABC_FtsE_transporter F 100.0 6.1E-40 1.3E-44 325.8 22.9 192 400-595 1-214 (214)
204 COG1117 PstB ABC-type phosphat 100.0 1.4E-40 2.9E-45 314.0 17.1 202 397-604 5-234 (253)
205 cd03268 ABC_BcrA_bacitracin_re 100.0 5.4E-40 1.2E-44 324.7 22.3 192 400-597 1-206 (208)
206 cd03256 ABC_PhnC_transporter A 100.0 5.4E-40 1.2E-44 332.2 22.8 219 88-317 1-232 (241)
207 TIGR02673 FtsE cell division A 100.0 3.5E-40 7.7E-45 327.5 21.1 209 88-306 2-214 (214)
208 PRK10619 histidine/lysine/argi 100.0 5.7E-40 1.2E-44 335.2 23.1 229 87-317 5-239 (257)
209 PRK10575 iron-hydroxamate tran 100.0 1.3E-39 2.8E-44 334.0 25.7 206 396-607 8-237 (265)
210 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-39 2.8E-44 328.4 25.2 202 399-607 1-221 (236)
211 PRK14250 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 329.4 25.2 201 399-605 3-219 (241)
212 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.4E-40 1.4E-44 331.9 23.0 213 88-312 1-219 (242)
213 cd03260 ABC_PstB_phosphate_tra 100.0 3.6E-40 7.9E-45 330.4 21.0 213 88-312 1-223 (227)
214 PRK13631 cbiO cobalt transport 100.0 4.7E-40 1E-44 344.7 22.7 230 86-316 20-263 (320)
215 PRK13650 cbiO cobalt transport 100.0 1.4E-39 3E-44 336.0 25.8 205 398-606 3-228 (279)
216 PRK11300 livG leucine/isoleuci 100.0 1.5E-39 3.2E-44 331.8 25.6 204 397-606 3-242 (255)
217 cd03268 ABC_BcrA_bacitracin_re 100.0 3E-40 6.5E-45 326.6 19.9 204 88-310 1-207 (208)
218 TIGR02315 ABC_phnC phosphonate 100.0 3.6E-40 7.8E-45 333.9 20.9 219 88-316 2-232 (243)
219 PRK13638 cbiO cobalt transport 100.0 1E-39 2.2E-44 335.8 24.5 203 399-606 1-224 (271)
220 PRK09544 znuC high-affinity zi 100.0 1.2E-39 2.7E-44 330.9 24.8 202 398-606 3-208 (251)
221 PRK11124 artP arginine transpo 100.0 8.5E-40 1.9E-44 331.0 23.5 224 86-317 1-228 (242)
222 PRK11607 potG putrescine trans 100.0 1.9E-39 4.1E-44 346.4 27.3 205 397-607 17-239 (377)
223 COG3840 ThiQ ABC-type thiamine 100.0 5.1E-40 1.1E-44 302.2 19.6 200 399-606 1-218 (231)
224 PRK15079 oligopeptide ABC tran 100.0 5.2E-40 1.1E-44 345.7 22.5 220 86-313 7-246 (331)
225 cd03224 ABC_TM1139_LivF_branch 100.0 8.8E-40 1.9E-44 326.5 23.0 200 400-605 1-219 (222)
226 TIGR01188 drrA daunorubicin re 100.0 7.5E-40 1.6E-44 341.7 23.5 195 408-608 2-214 (302)
227 PRK13649 cbiO cobalt transport 100.0 7.2E-40 1.6E-44 338.6 23.1 217 87-312 2-228 (280)
228 COG4559 ABC-type hemin transpo 100.0 4.7E-40 1E-44 309.7 19.7 221 87-321 1-233 (259)
229 PRK10895 lipopolysaccharide AB 100.0 1.3E-39 2.7E-44 329.5 24.4 203 399-607 3-226 (241)
230 TIGR01188 drrA daunorubicin re 100.0 4.9E-40 1.1E-44 343.1 22.0 204 95-312 1-207 (302)
231 PRK13639 cbiO cobalt transport 100.0 1.9E-39 4.1E-44 334.3 26.1 204 399-606 1-225 (275)
232 PRK13635 cbiO cobalt transport 100.0 1.9E-39 4.2E-44 334.8 25.8 206 397-606 3-228 (279)
233 PRK10895 lipopolysaccharide AB 100.0 6E-40 1.3E-44 331.9 21.7 218 87-317 3-224 (241)
234 PRK13636 cbiO cobalt transport 100.0 7.6E-40 1.7E-44 338.6 22.7 219 87-317 5-229 (283)
235 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 8.3E-40 1.8E-44 329.8 22.3 211 87-312 1-215 (236)
236 cd03257 ABC_NikE_OppD_transpor 100.0 5.9E-40 1.3E-44 329.0 21.0 215 88-310 2-227 (228)
237 PRK11308 dppF dipeptide transp 100.0 7.8E-40 1.7E-44 344.0 22.8 221 87-315 5-241 (327)
238 PRK13645 cbiO cobalt transport 100.0 2.1E-39 4.5E-44 336.6 25.7 206 398-605 5-238 (289)
239 PRK11124 artP arginine transpo 100.0 2.5E-39 5.5E-44 327.5 25.7 202 399-606 2-229 (242)
240 cd03262 ABC_HisP_GlnQ_permease 100.0 1.1E-39 2.3E-44 323.8 22.5 191 400-595 1-213 (213)
241 TIGR03411 urea_trans_UrtD urea 100.0 9.4E-40 2E-44 330.6 22.4 218 87-317 2-229 (242)
242 PRK10908 cell division protein 100.0 9.7E-40 2.1E-44 326.3 22.0 212 88-309 2-217 (222)
243 cd03292 ABC_FtsE_transporter F 100.0 6.1E-40 1.3E-44 325.8 20.2 210 88-307 1-214 (214)
244 PRK11231 fecE iron-dicitrate t 100.0 1.6E-39 3.6E-44 331.4 23.9 217 86-316 1-224 (255)
245 PRK13548 hmuV hemin importer A 100.0 2.4E-39 5.3E-44 330.5 25.1 203 399-607 2-230 (258)
246 COG4175 ProV ABC-type proline/ 100.0 1.4E-39 3.1E-44 322.8 22.6 225 87-320 4-256 (386)
247 TIGR01978 sufC FeS assembly AT 100.0 1.9E-39 4.1E-44 328.6 24.0 203 400-607 1-234 (243)
248 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.2E-39 2.7E-44 334.7 22.9 201 401-607 26-250 (269)
249 PRK13650 cbiO cobalt transport 100.0 1.2E-39 2.7E-44 336.3 23.0 214 87-314 4-225 (279)
250 TIGR00972 3a0107s01c2 phosphat 100.0 1.5E-39 3.3E-44 330.2 23.2 215 88-313 2-227 (247)
251 TIGR00972 3a0107s01c2 phosphat 100.0 3.7E-39 8E-44 327.3 26.0 202 399-606 1-231 (247)
252 PRK14242 phosphate transporter 100.0 2.6E-39 5.7E-44 329.6 25.0 205 396-606 3-236 (253)
253 PRK11231 fecE iron-dicitrate t 100.0 3.2E-39 7E-44 329.3 25.6 202 399-606 2-226 (255)
254 COG4604 CeuD ABC-type enteroch 100.0 4.3E-40 9.3E-45 306.4 17.3 220 87-319 1-226 (252)
255 TIGR03410 urea_trans_UrtE urea 100.0 2.3E-39 4.9E-44 325.3 24.0 201 400-606 1-220 (230)
256 TIGR02769 nickel_nikE nickel i 100.0 1.1E-39 2.5E-44 334.4 22.1 218 87-312 2-234 (265)
257 cd03235 ABC_Metallic_Cations A 100.0 6.4E-40 1.4E-44 325.4 19.4 201 89-306 1-209 (213)
258 COG0444 DppD ABC-type dipeptid 100.0 2.2E-39 4.7E-44 326.9 23.3 206 399-605 1-241 (316)
259 COG4152 ABC-type uncharacteriz 100.0 5.3E-40 1.1E-44 315.3 17.9 204 399-608 2-220 (300)
260 PRK10418 nikD nickel transport 100.0 5.2E-39 1.1E-43 327.5 26.4 204 399-606 4-229 (254)
261 PRK13645 cbiO cobalt transport 100.0 1.3E-39 2.7E-44 338.1 22.3 216 87-315 6-237 (289)
262 PRK11614 livF leucine/isoleuci 100.0 2.8E-39 6.2E-44 326.1 24.2 203 398-606 4-225 (237)
263 cd03224 ABC_TM1139_LivF_branch 100.0 9.6E-40 2.1E-44 326.2 20.5 210 88-311 1-214 (222)
264 PRK11147 ABC transporter ATPas 100.0 3.8E-39 8.3E-44 368.2 28.2 205 398-609 2-245 (635)
265 PRK13644 cbiO cobalt transport 100.0 3.5E-39 7.7E-44 332.0 25.2 203 399-606 1-223 (274)
266 TIGR03005 ectoine_ehuA ectoine 100.0 3.9E-39 8.4E-44 328.1 25.1 201 400-606 1-235 (252)
267 PRK10771 thiQ thiamine transpo 100.0 4.4E-39 9.5E-44 323.7 25.1 201 399-607 1-219 (232)
268 PRK10419 nikE nickel transport 100.0 4.2E-39 9.2E-44 330.5 25.4 207 398-605 2-239 (268)
269 COG1123 ATPase components of v 100.0 7.6E-40 1.7E-44 352.9 20.8 223 86-317 279-518 (539)
270 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-39 3.4E-44 331.0 22.0 224 88-316 1-233 (252)
271 TIGR01978 sufC FeS assembly AT 100.0 1.4E-39 3.1E-44 329.5 21.6 217 88-315 1-230 (243)
272 COG1137 YhbG ABC-type (unclass 100.0 1.4E-40 3E-45 310.6 12.9 204 398-607 3-228 (243)
273 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.5E-39 1.2E-43 361.9 28.5 207 398-609 3-250 (552)
274 PRK11022 dppD dipeptide transp 100.0 1.9E-39 4.2E-44 341.1 23.2 222 87-315 3-240 (326)
275 COG3840 ThiQ ABC-type thiamine 100.0 1.7E-39 3.8E-44 298.7 19.8 208 88-313 2-214 (231)
276 PRK10070 glycine betaine trans 100.0 4.9E-39 1.1E-43 344.4 26.6 187 416-606 43-253 (400)
277 TIGR02211 LolD_lipo_ex lipopro 100.0 1.4E-39 3.1E-44 324.8 21.0 210 88-308 2-220 (221)
278 PRK13652 cbiO cobalt transport 100.0 2.1E-39 4.6E-44 334.3 22.9 217 87-317 3-225 (277)
279 PRK15112 antimicrobial peptide 100.0 1.6E-39 3.5E-44 333.6 21.8 218 87-316 4-236 (267)
280 PRK10253 iron-enterobactin tra 100.0 5.2E-39 1.1E-43 329.5 25.4 204 397-606 5-232 (265)
281 PRK13639 cbiO cobalt transport 100.0 2.4E-39 5.3E-44 333.5 22.9 218 87-316 1-223 (275)
282 PRK14247 phosphate ABC transpo 100.0 6.1E-39 1.3E-43 326.3 25.4 204 398-606 2-233 (250)
283 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.6E-39 1E-43 318.8 24.0 191 400-597 1-209 (211)
284 PRK14268 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 331.1 22.0 217 87-314 12-238 (258)
285 COG0410 LivF ABC-type branched 100.0 4.3E-39 9.3E-44 309.4 22.6 205 398-607 2-226 (237)
286 PRK13644 cbiO cobalt transport 100.0 1.8E-39 3.9E-44 334.2 21.5 213 87-313 1-219 (274)
287 TIGR03873 F420-0_ABC_ATP propo 100.0 5.2E-39 1.1E-43 327.9 24.8 201 400-606 2-225 (256)
288 PRK14268 phosphate ABC transpo 100.0 7.1E-39 1.5E-43 327.3 25.7 204 397-606 10-241 (258)
289 PRK15056 manganese/iron transp 100.0 5.9E-39 1.3E-43 330.3 25.3 204 398-605 5-228 (272)
290 PRK11701 phnK phosphonate C-P 100.0 3.1E-39 6.7E-44 330.0 22.8 222 87-313 6-236 (258)
291 PRK13548 hmuV hemin importer A 100.0 3.9E-39 8.5E-44 329.0 23.5 216 87-316 2-227 (258)
292 PRK13632 cbiO cobalt transport 100.0 5.6E-39 1.2E-43 330.2 24.8 205 397-605 5-229 (271)
293 PRK11300 livG leucine/isoleuci 100.0 2.8E-39 6.1E-44 329.7 22.2 215 87-312 5-237 (255)
294 PRK10575 iron-hydroxamate tran 100.0 3E-39 6.4E-44 331.3 22.4 213 87-312 11-231 (265)
295 PRK14242 phosphate transporter 100.0 3E-39 6.5E-44 329.2 22.3 216 86-312 5-231 (253)
296 PRK11629 lolD lipoprotein tran 100.0 4.5E-39 9.8E-44 323.8 23.1 214 87-310 5-226 (233)
297 PRK14267 phosphate ABC transpo 100.0 8.4E-39 1.8E-43 325.9 25.1 204 398-606 3-236 (253)
298 PRK10253 iron-enterobactin tra 100.0 4.7E-39 1E-43 329.8 23.2 213 87-312 7-227 (265)
299 PRK13633 cobalt transporter AT 100.0 7.8E-39 1.7E-43 330.6 25.0 206 398-607 3-233 (280)
300 PRK10744 pstB phosphate transp 100.0 4.6E-39 1E-43 329.0 23.1 217 86-313 12-239 (260)
301 PRK10070 glycine betaine trans 100.0 4.9E-39 1.1E-43 344.4 24.1 218 87-313 4-249 (400)
302 TIGR03740 galliderm_ABC gallid 100.0 6.1E-39 1.3E-43 320.7 23.2 198 400-604 1-210 (223)
303 PRK14273 phosphate ABC transpo 100.0 1E-38 2.2E-43 325.4 25.3 204 397-606 5-237 (254)
304 PRK10584 putative ABC transpor 100.0 3.3E-39 7.1E-44 323.8 21.3 213 87-309 6-226 (228)
305 PRK14241 phosphate transporter 100.0 5.2E-39 1.1E-43 328.3 23.0 217 87-313 4-237 (258)
306 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.8E-39 6E-44 323.2 20.4 198 88-310 23-223 (224)
307 COG1137 YhbG ABC-type (unclass 100.0 1.9E-40 4.1E-45 309.7 11.1 221 87-319 4-229 (243)
308 TIGR03873 F420-0_ABC_ATP propo 100.0 5.6E-39 1.2E-43 327.7 23.1 213 88-312 2-220 (256)
309 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.5E-39 9.8E-44 318.9 21.7 206 88-310 1-210 (211)
310 TIGR01186 proV glycine betaine 100.0 3E-39 6.6E-44 342.1 21.6 212 95-315 1-216 (363)
311 PRK10744 pstB phosphate transp 100.0 1.6E-38 3.4E-43 325.1 26.1 204 397-606 11-243 (260)
312 TIGR01186 proV glycine betaine 100.0 6.3E-39 1.4E-43 339.7 23.8 189 415-607 7-219 (363)
313 PRK14269 phosphate ABC transpo 100.0 5.4E-39 1.2E-43 325.9 22.4 218 86-316 1-228 (246)
314 PRK14235 phosphate transporter 100.0 1.6E-38 3.4E-43 326.2 26.0 205 396-606 16-250 (267)
315 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.7E-39 8E-44 331.1 21.3 216 89-313 26-245 (269)
316 PRK14248 phosphate ABC transpo 100.0 4.7E-39 1E-43 330.4 22.1 217 86-313 20-247 (268)
317 PRK14248 phosphate ABC transpo 100.0 1.7E-38 3.6E-43 326.4 26.1 204 397-606 19-251 (268)
318 COG4181 Predicted ABC-type tra 100.0 3.6E-39 7.8E-44 293.6 18.6 194 399-596 6-225 (228)
319 TIGR03415 ABC_choXWV_ATP choli 100.0 1.2E-38 2.7E-43 338.9 25.8 189 414-606 37-253 (382)
320 PRK13648 cbiO cobalt transport 100.0 1.4E-38 3.1E-43 327.0 25.3 207 397-607 5-231 (269)
321 PRK09473 oppD oligopeptide tra 100.0 7.6E-39 1.6E-43 337.0 23.7 221 87-315 12-248 (330)
322 PRK11614 livF leucine/isoleuci 100.0 4.2E-39 9.1E-44 324.9 20.8 212 87-312 5-220 (237)
323 PRK09984 phosphonate/organopho 100.0 1.1E-38 2.4E-43 326.6 24.1 223 87-317 4-240 (262)
324 PRK13635 cbiO cobalt transport 100.0 6.2E-39 1.3E-43 331.0 22.3 212 87-312 5-223 (279)
325 TIGR02323 CP_lyasePhnK phospho 100.0 7.7E-39 1.7E-43 326.2 22.6 221 87-312 3-232 (253)
326 TIGR03410 urea_trans_UrtE urea 100.0 4.6E-39 1E-43 323.1 20.6 211 88-312 1-215 (230)
327 COG4152 ABC-type uncharacteriz 100.0 2.6E-39 5.7E-44 310.5 17.7 209 87-312 2-213 (300)
328 PRK15439 autoinducer 2 ABC tra 100.0 1.6E-38 3.5E-43 354.8 27.1 205 397-607 9-229 (510)
329 cd03267 ABC_NatA_like Similar 100.0 2.3E-39 5.1E-44 326.4 18.4 203 95-310 29-235 (236)
330 PRK13640 cbiO cobalt transport 100.0 1.8E-38 4E-43 328.1 25.5 206 397-606 3-231 (282)
331 PRK14273 phosphate ABC transpo 100.0 8.7E-39 1.9E-43 325.9 22.5 215 87-312 7-232 (254)
332 COG4598 HisP ABC-type histidin 100.0 1.1E-39 2.4E-44 298.9 14.2 203 398-606 5-240 (256)
333 PRK14235 phosphate transporter 100.0 1.2E-38 2.6E-43 327.1 23.6 216 87-313 19-246 (267)
334 cd03300 ABC_PotA_N PotA is an 100.0 1.4E-38 3.1E-43 320.0 23.5 211 88-313 1-215 (232)
335 PRK14267 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 325.1 22.9 217 87-313 4-232 (253)
336 cd03245 ABCC_bacteriocin_expor 100.0 1.2E-38 2.7E-43 317.8 22.8 193 400-597 3-218 (220)
337 PRK14256 phosphate ABC transpo 100.0 9.1E-39 2E-43 325.4 22.2 219 87-314 4-232 (252)
338 TIGR01277 thiQ thiamine ABC tr 100.0 1.8E-38 3.8E-43 315.1 23.7 191 400-597 1-209 (213)
339 PRK14247 phosphate ABC transpo 100.0 9.2E-39 2E-43 325.0 22.2 214 87-312 3-228 (250)
340 PRK14241 phosphate transporter 100.0 2.5E-38 5.4E-43 323.3 25.4 203 399-606 4-241 (258)
341 PRK13633 cobalt transporter AT 100.0 7.4E-39 1.6E-43 330.8 21.6 214 87-313 4-228 (280)
342 PRK11144 modC molybdate transp 100.0 2.4E-38 5.3E-43 336.4 25.9 199 399-607 1-218 (352)
343 PRK10261 glutathione transport 100.0 1.3E-38 2.9E-43 362.8 25.3 209 397-606 10-257 (623)
344 PRK14245 phosphate ABC transpo 100.0 1.4E-38 3E-43 323.7 22.8 217 87-314 3-230 (250)
345 cd03252 ABCC_Hemolysin The ABC 100.0 2.4E-38 5.3E-43 319.3 24.3 201 400-607 1-225 (237)
346 cd03214 ABC_Iron-Siderophores_ 100.0 2E-38 4.3E-43 306.4 22.5 175 89-310 1-179 (180)
347 PRK14240 phosphate transporter 100.0 1.3E-38 2.9E-43 323.8 22.3 217 87-314 3-230 (250)
348 PRK09700 D-allose transporter 100.0 1.4E-38 3.1E-43 355.8 24.7 203 397-605 3-232 (510)
349 PRK13642 cbiO cobalt transport 100.0 3.5E-38 7.6E-43 325.3 25.7 205 398-606 3-228 (277)
350 PRK14275 phosphate ABC transpo 100.0 5E-38 1.1E-42 325.4 26.8 205 396-606 36-269 (286)
351 PRK15093 antimicrobial peptide 100.0 1.1E-38 2.4E-43 336.4 22.2 221 87-314 3-244 (330)
352 PRK10247 putative ABC transpor 100.0 2E-38 4.2E-43 317.4 22.8 198 397-602 5-222 (225)
353 cd03300 ABC_PotA_N PotA is an 100.0 2.9E-38 6.3E-43 317.7 24.1 201 400-606 1-219 (232)
354 PRK14239 phosphate transporter 100.0 1.9E-38 4E-43 323.1 23.0 219 87-316 5-234 (252)
355 PRK14274 phosphate ABC transpo 100.0 4.7E-38 1E-42 321.4 26.0 206 395-606 8-242 (259)
356 PRK14271 phosphate ABC transpo 100.0 2.8E-38 6.2E-43 325.5 24.5 217 85-313 19-246 (276)
357 COG4175 ProV ABC-type proline/ 100.0 1.2E-38 2.5E-43 316.4 20.6 205 399-607 4-254 (386)
358 TIGR03740 galliderm_ABC gallid 100.0 2E-38 4.4E-43 317.0 22.6 205 88-313 1-208 (223)
359 PRK13543 cytochrome c biogenes 100.0 2.3E-38 5E-43 314.5 22.9 192 396-592 8-212 (214)
360 PRK14245 phosphate ABC transpo 100.0 4.5E-38 9.7E-43 319.9 25.5 203 398-606 2-233 (250)
361 PRK14269 phosphate ABC transpo 100.0 4.2E-38 9.1E-43 319.4 25.2 202 399-606 2-229 (246)
362 PRK14270 phosphate ABC transpo 100.0 4E-38 8.6E-43 320.5 25.1 203 397-605 2-233 (251)
363 PRK10771 thiQ thiamine transpo 100.0 2.5E-38 5.4E-43 318.2 23.3 212 88-317 2-217 (232)
364 PRK14274 phosphate ABC transpo 100.0 1.8E-38 4E-43 324.4 22.7 217 87-314 12-239 (259)
365 PRK14239 phosphate transporter 100.0 6E-38 1.3E-42 319.4 26.3 203 397-605 3-234 (252)
366 PRK13640 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 329.2 21.7 215 87-315 5-229 (282)
367 PRK14251 phosphate ABC transpo 100.0 1.7E-38 3.6E-43 323.3 22.1 217 87-314 4-231 (251)
368 PRK15134 microcin C ABC transp 100.0 2.8E-38 6.1E-43 354.7 26.2 208 397-605 3-244 (529)
369 PRK10419 nikE nickel transport 100.0 1.7E-38 3.6E-43 326.1 22.2 219 87-313 3-236 (268)
370 COG0444 DppD ABC-type dipeptid 100.0 1.9E-38 4.1E-43 320.1 21.9 224 88-318 2-243 (316)
371 PRK14256 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 319.2 26.0 203 399-606 4-235 (252)
372 PRK14237 phosphate transporter 100.0 2.8E-38 6.1E-43 324.3 23.5 222 82-314 15-247 (267)
373 cd03267 ABC_NatA_like Similar 100.0 2.5E-38 5.4E-43 318.9 22.6 181 415-597 35-234 (236)
374 PRK14270 phosphate ABC transpo 100.0 2.7E-38 5.8E-43 321.8 23.1 219 87-316 4-233 (251)
375 cd03254 ABCC_Glucan_exporter_l 100.0 3.5E-38 7.6E-43 316.5 23.5 199 400-606 3-225 (229)
376 PRK13547 hmuV hemin importer A 100.0 2.5E-38 5.4E-43 324.8 22.9 212 88-312 2-238 (272)
377 PRK10762 D-ribose transporter 100.0 2.1E-38 4.5E-43 353.5 24.2 202 398-605 3-228 (501)
378 PRK14272 phosphate ABC transpo 100.0 2.4E-38 5.2E-43 322.3 22.3 217 87-313 4-231 (252)
379 PRK13632 cbiO cobalt transport 100.0 1.7E-38 3.7E-43 326.6 21.3 212 87-312 7-225 (271)
380 PRK14254 phosphate ABC transpo 100.0 8.7E-38 1.9E-42 323.3 26.6 204 396-605 36-267 (285)
381 PRK14272 phosphate ABC transpo 100.0 6.1E-38 1.3E-42 319.3 25.0 203 399-606 4-235 (252)
382 PRK14271 phosphate ABC transpo 100.0 9.4E-38 2E-42 321.7 26.7 205 397-607 19-251 (276)
383 cd03297 ABC_ModC_molybdenum_tr 100.0 3.4E-38 7.3E-43 313.3 22.5 189 400-597 2-212 (214)
384 PRK14262 phosphate ABC transpo 100.0 7E-38 1.5E-42 318.5 25.2 203 398-606 2-233 (250)
385 PRK13547 hmuV hemin importer A 100.0 6.8E-38 1.5E-42 321.6 25.3 201 399-605 1-242 (272)
386 COG4559 ABC-type hemin transpo 100.0 1.9E-38 4.2E-43 298.8 19.3 201 399-605 1-228 (259)
387 PRK14251 phosphate ABC transpo 100.0 5.9E-38 1.3E-42 319.3 24.6 202 398-605 3-233 (251)
388 PRK14238 phosphate transporter 100.0 2.4E-38 5.2E-43 325.5 21.8 221 83-314 20-251 (271)
389 PRK14259 phosphate ABC transpo 100.0 7.9E-38 1.7E-42 321.3 25.6 204 397-606 11-252 (269)
390 cd03251 ABCC_MsbA MsbA is an e 100.0 6.1E-38 1.3E-42 315.8 24.3 201 400-607 1-225 (234)
391 TIGR00968 3a0106s01 sulfate AB 100.0 6.1E-38 1.3E-42 316.3 24.1 208 88-312 1-214 (237)
392 COG0410 LivF ABC-type branched 100.0 2.7E-38 5.9E-43 303.9 20.3 212 87-313 3-221 (237)
393 TIGR02324 CP_lyasePhnL phospho 100.0 4.9E-38 1.1E-42 314.4 23.1 191 399-591 1-223 (224)
394 PRK14259 phosphate ABC transpo 100.0 3.4E-38 7.3E-43 324.0 22.5 219 86-316 12-251 (269)
395 PRK14254 phosphate ABC transpo 100.0 4.3E-38 9.3E-43 325.6 23.3 217 87-315 39-266 (285)
396 PRK13648 cbiO cobalt transport 100.0 2.6E-38 5.6E-43 325.0 21.5 212 87-312 7-225 (269)
397 cd03299 ABC_ModC_like Archeal 100.0 5.8E-38 1.3E-42 316.1 23.6 211 88-315 1-215 (235)
398 PRK14236 phosphate transporter 100.0 4.7E-38 1E-42 323.6 23.3 219 84-313 22-251 (272)
399 PRK14237 phosphate transporter 100.0 1.1E-37 2.4E-42 320.0 25.9 203 397-605 18-249 (267)
400 PRK13549 xylose transporter AT 100.0 3.8E-38 8.3E-43 351.8 24.3 203 397-605 3-230 (506)
401 PRK11144 modC molybdate transp 100.0 2.1E-38 4.5E-43 337.0 21.2 212 88-317 2-217 (352)
402 cd03223 ABCD_peroxisomal_ALDP 100.0 4.4E-38 9.4E-43 299.8 21.2 164 400-594 1-164 (166)
403 PRK14246 phosphate ABC transpo 100.0 1E-37 2.3E-42 318.2 25.3 206 396-606 7-240 (257)
404 PRK14240 phosphate transporter 100.0 1.2E-37 2.6E-42 316.8 25.7 202 399-606 3-233 (250)
405 PRK14246 phosphate ABC transpo 100.0 4.8E-38 1E-42 320.6 22.7 220 87-316 10-239 (257)
406 COG2274 SunT ABC-type bacterio 100.0 2.2E-38 4.7E-43 358.7 22.2 205 398-608 470-697 (709)
407 COG4181 Predicted ABC-type tra 100.0 4.3E-39 9.3E-44 293.1 13.0 213 87-309 6-226 (228)
408 PRK09580 sufC cysteine desulfu 100.0 3.3E-38 7.1E-43 320.6 21.1 216 87-315 1-231 (248)
409 CHL00131 ycf16 sulfate ABC tra 100.0 1.1E-37 2.3E-42 317.5 24.9 202 397-603 5-237 (252)
410 PRK14262 phosphate ABC transpo 100.0 4.8E-38 1E-42 319.7 22.2 216 87-313 3-229 (250)
411 PRK14249 phosphate ABC transpo 100.0 4.4E-38 9.6E-43 320.2 21.9 217 87-314 4-231 (251)
412 cd03299 ABC_ModC_like Archeal 100.0 1E-37 2.3E-42 314.2 24.4 200 400-606 1-218 (235)
413 PRK13546 teichoic acids export 100.0 2.7E-37 5.8E-42 315.6 27.7 204 400-609 5-234 (264)
414 TIGR00968 3a0106s01 sulfate AB 100.0 1.3E-37 2.9E-42 313.9 25.1 201 400-606 1-219 (237)
415 COG4608 AppF ABC-type oligopep 100.0 2.9E-38 6.2E-43 312.5 19.8 183 87-318 4-199 (268)
416 PRK10418 nikD nickel transport 100.0 7.9E-38 1.7E-42 318.8 23.7 208 87-312 4-224 (254)
417 TIGR02142 modC_ABC molybdenum 100.0 8.4E-38 1.8E-42 332.8 24.9 195 404-606 4-220 (354)
418 PRK14238 phosphate transporter 100.0 1.2E-37 2.7E-42 320.1 25.3 204 397-606 22-254 (271)
419 PRK14253 phosphate ABC transpo 100.0 5.6E-38 1.2E-42 319.1 22.4 213 87-312 3-227 (249)
420 TIGR01277 thiQ thiamine ABC tr 100.0 7E-38 1.5E-42 310.8 22.5 207 88-311 1-211 (213)
421 PRK13642 cbiO cobalt transport 100.0 4.5E-38 9.8E-43 324.4 22.0 213 87-313 4-224 (277)
422 cd03245 ABCC_bacteriocin_expor 100.0 3.4E-38 7.4E-43 314.6 20.4 203 87-310 2-219 (220)
423 cd03297 ABC_ModC_molybdenum_tr 100.0 3E-38 6.5E-43 313.7 19.9 208 88-310 2-213 (214)
424 cd03214 ABC_Iron-Siderophores_ 100.0 3.5E-38 7.5E-43 304.7 19.7 174 401-597 1-178 (180)
425 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.8E-38 1.7E-42 312.7 22.9 192 400-597 23-222 (224)
426 PRK14255 phosphate ABC transpo 100.0 4.8E-38 1E-42 320.1 21.7 221 87-318 5-236 (252)
427 PRK14275 phosphate ABC transpo 100.0 6.1E-38 1.3E-42 324.7 22.8 216 87-313 39-265 (286)
428 TIGR03415 ABC_choXWV_ATP choli 100.0 3.9E-38 8.4E-43 335.1 21.6 216 91-314 28-250 (382)
429 PRK10247 putative ABC transpor 100.0 3.1E-38 6.8E-43 315.9 19.7 205 87-307 7-217 (225)
430 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.2E-37 2.6E-42 314.5 23.9 201 400-607 1-226 (238)
431 TIGR02770 nickel_nikD nickel i 100.0 8.1E-38 1.8E-42 314.1 22.5 190 416-606 1-214 (230)
432 PRK14265 phosphate ABC transpo 100.0 2E-37 4.4E-42 319.0 25.9 205 396-606 17-257 (274)
433 PRK09580 sufC cysteine desulfu 100.0 1.7E-37 3.8E-42 315.2 25.1 201 399-604 1-232 (248)
434 PRK14253 phosphate ABC transpo 100.0 1.8E-37 3.9E-42 315.3 25.0 202 399-606 3-232 (249)
435 PRK14265 phosphate ABC transpo 100.0 9.4E-38 2E-42 321.5 23.2 224 81-316 14-256 (274)
436 PRK14243 phosphate transporter 100.0 1.6E-37 3.4E-42 318.3 24.7 203 398-606 9-247 (264)
437 PRK14255 phosphate ABC transpo 100.0 1.7E-37 3.8E-42 316.0 24.9 203 397-605 3-234 (252)
438 CHL00131 ycf16 sulfate ABC tra 100.0 5.4E-38 1.2E-42 319.7 21.1 214 87-312 7-235 (252)
439 TIGR02982 heterocyst_DevA ABC 100.0 1.6E-37 3.4E-42 309.9 24.0 193 399-595 1-219 (220)
440 PRK13538 cytochrome c biogenes 100.0 6.5E-38 1.4E-42 308.9 20.9 187 399-590 1-202 (204)
441 PRK09544 znuC high-affinity zi 100.0 3.6E-38 7.8E-43 320.2 19.6 195 87-312 4-203 (251)
442 PRK14252 phosphate ABC transpo 100.0 1.4E-37 3.1E-42 318.9 24.0 226 82-316 11-247 (265)
443 PRK11288 araG L-arabinose tran 100.0 1.2E-37 2.5E-42 347.5 25.4 195 398-597 3-220 (501)
444 PRK14244 phosphate ABC transpo 100.0 2E-37 4.2E-42 315.4 24.7 201 400-606 6-236 (251)
445 PRK13545 tagH teichoic acids e 100.0 3.8E-37 8.2E-42 333.3 28.3 205 397-607 19-232 (549)
446 PRK14249 phosphate ABC transpo 100.0 2.8E-37 6E-42 314.3 25.7 203 398-606 3-234 (251)
447 PRK14258 phosphate ABC transpo 100.0 3E-37 6.6E-42 315.7 26.2 203 398-606 6-244 (261)
448 PRK13538 cytochrome c biogenes 100.0 4.7E-38 1E-42 310.0 19.4 199 87-302 1-202 (204)
449 PRK14236 phosphate transporter 100.0 2.8E-37 6.1E-42 317.8 25.9 204 397-606 23-255 (272)
450 cd03244 ABCC_MRP_domain2 Domai 100.0 1.4E-37 3E-42 310.5 22.7 192 400-597 3-217 (221)
451 cd03253 ABCC_ATM1_transporter 100.0 2.2E-37 4.7E-42 312.2 24.3 200 400-607 1-224 (236)
452 TIGR03608 L_ocin_972_ABC putat 100.0 1E-37 2.2E-42 308.0 21.3 183 402-590 1-206 (206)
453 TIGR02142 modC_ABC molybdenum 100.0 6.3E-38 1.4E-42 333.7 21.3 209 92-313 4-216 (354)
454 PRK14258 phosphate ABC transpo 100.0 1.3E-37 2.8E-42 318.5 22.7 219 87-316 7-243 (261)
455 COG4608 AppF ABC-type oligopep 100.0 7E-38 1.5E-42 309.8 19.8 181 398-602 3-194 (268)
456 cd03215 ABC_Carb_Monos_II This 100.0 9.4E-38 2E-42 302.2 20.3 165 397-595 2-182 (182)
457 PRK10938 putative molybdenum t 100.0 9.4E-38 2E-42 347.6 23.3 200 399-605 3-222 (490)
458 PRK13543 cytochrome c biogenes 100.0 6.2E-38 1.4E-42 311.4 19.5 201 85-304 9-212 (214)
459 TIGR02633 xylG D-xylose ABC tr 100.0 1.5E-37 3.2E-42 346.9 24.9 201 399-604 1-227 (500)
460 PRK13545 tagH teichoic acids e 100.0 2.4E-37 5.2E-42 334.9 25.6 201 87-313 21-227 (549)
461 PRK14260 phosphate ABC transpo 100.0 1.5E-37 3.3E-42 317.6 22.8 218 87-315 7-240 (259)
462 PRK15056 manganese/iron transp 100.0 6.6E-38 1.4E-42 322.4 20.2 210 87-312 6-224 (272)
463 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-37 2.3E-42 311.0 21.0 209 88-307 2-219 (220)
464 TIGR02324 CP_lyasePhnL phospho 100.0 1E-37 2.2E-42 312.1 20.9 211 87-303 1-223 (224)
465 PRK14244 phosphate ABC transpo 100.0 1.3E-37 2.7E-42 316.8 21.8 215 88-313 6-232 (251)
466 PRK14260 phosphate ABC transpo 100.0 3.9E-37 8.5E-42 314.6 25.3 203 398-606 6-242 (259)
467 TIGR03608 L_ocin_972_ABC putat 100.0 6.7E-38 1.4E-42 309.3 18.8 203 90-302 1-206 (206)
468 PRK14257 phosphate ABC transpo 100.0 5.8E-37 1.3E-41 322.3 27.0 206 397-606 78-312 (329)
469 cd03231 ABC_CcmA_heme_exporter 100.0 2E-37 4.3E-42 304.7 21.9 185 400-590 1-198 (201)
470 PRK14243 phosphate transporter 100.0 1.8E-37 3.9E-42 317.8 22.4 217 86-314 9-244 (264)
471 TIGR01184 ntrCD nitrate transp 100.0 1.3E-37 2.9E-42 312.4 20.9 182 417-602 1-199 (230)
472 PRK14264 phosphate ABC transpo 100.0 5.7E-37 1.2E-41 320.2 26.2 208 393-606 39-288 (305)
473 TIGR03269 met_CoM_red_A2 methy 100.0 2.8E-37 6E-42 346.2 25.5 204 400-608 1-259 (520)
474 PRK14261 phosphate ABC transpo 100.0 6.3E-37 1.4E-41 312.1 25.8 204 397-606 4-236 (253)
475 cd03248 ABCC_TAP TAP, the Tran 100.0 2.1E-37 4.5E-42 310.2 21.9 194 397-595 9-226 (226)
476 cd03221 ABCF_EF-3 ABCF_EF-3 E 100.0 2.5E-37 5.3E-42 287.5 20.7 144 400-594 1-144 (144)
477 cd03246 ABCC_Protease_Secretio 100.0 1.7E-37 3.7E-42 297.9 20.2 159 400-595 1-173 (173)
478 cd03216 ABC_Carb_Monos_I This 100.0 3.1E-37 6.7E-42 293.1 21.5 158 400-596 1-161 (163)
479 PRK14261 phosphate ABC transpo 100.0 2.3E-37 4.9E-42 315.3 21.8 216 87-313 6-232 (253)
480 COG1119 ModF ABC-type molybden 100.0 6.4E-38 1.4E-42 303.5 16.7 199 396-597 28-253 (257)
481 cd03234 ABCG_White The White s 100.0 3.4E-37 7.3E-42 308.8 22.5 196 399-597 3-224 (226)
482 cd03230 ABC_DR_subfamily_A Thi 100.0 3E-37 6.5E-42 296.2 21.2 160 400-595 1-173 (173)
483 cd03254 ABCC_Glucan_exporter_l 100.0 3.3E-37 7.2E-42 309.4 22.4 213 87-317 2-224 (229)
484 cd03247 ABCC_cytochrome_bd The 100.0 3.9E-37 8.4E-42 296.9 21.8 164 400-597 1-176 (178)
485 cd03216 ABC_Carb_Monos_I This 100.0 1.9E-37 4.1E-42 294.6 19.0 159 88-309 1-162 (163)
486 cd03231 ABC_CcmA_heme_exporter 100.0 9.9E-38 2.2E-42 306.9 17.6 195 88-302 1-198 (201)
487 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.4E-37 7.4E-42 356.4 25.1 202 399-607 451-673 (686)
488 cd03289 ABCC_CFTR2 The CFTR su 100.0 6E-37 1.3E-41 314.3 23.9 199 400-607 3-225 (275)
489 PRK13546 teichoic acids export 100.0 2.1E-36 4.5E-41 309.1 27.6 204 87-317 4-230 (264)
490 COG4987 CydC ABC-type transpor 100.0 2E-37 4.3E-42 327.5 19.7 203 399-607 336-561 (573)
491 COG4604 CeuD ABC-type enteroch 100.0 6.2E-38 1.3E-42 291.9 14.0 202 399-606 1-224 (252)
492 COG4525 TauB ABC-type taurine 100.0 2.3E-37 5E-42 287.6 17.8 197 398-597 2-215 (259)
493 COG4988 CydD ABC-type transpor 100.0 3.4E-37 7.3E-42 331.0 21.8 202 399-607 320-543 (559)
494 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.3E-36 2.9E-41 300.3 24.5 186 398-597 5-203 (207)
495 cd03252 ABCC_Hemolysin The ABC 100.0 4.5E-37 9.7E-42 310.1 21.4 208 88-312 1-219 (237)
496 COG1119 ModF ABC-type molybden 100.0 2.1E-37 4.6E-42 299.9 18.1 216 85-311 29-255 (257)
497 PRK10982 galactose/methyl gala 100.0 4.4E-37 9.4E-42 342.2 23.4 198 402-605 1-221 (491)
498 PRK14266 phosphate ABC transpo 100.0 7E-37 1.5E-41 311.2 22.8 216 87-312 3-228 (250)
499 PRK14252 phosphate ABC transpo 100.0 1.6E-36 3.5E-41 311.1 25.6 204 397-606 14-248 (265)
500 PRK14263 phosphate ABC transpo 100.0 1.8E-36 4E-41 309.7 25.8 205 397-607 6-245 (261)
No 1
>KOG0927|consensus
Probab=100.00 E-value=3.1e-112 Score=889.85 Aligned_cols=608 Identities=63% Similarity=1.010 Sum_probs=551.0
Q ss_pred CCChhHhHHHHHHHHHHhhcccCCCCCCCCCCCCCCCccccccCcCCCCCCCChhHHHHHHHHHHhhHHHHhhhccCccc
Q psy10512 1 MPSDAKKKQQQKKKEQAKGRGAAAPKKPTTSATNDVKPEQITNGVKQEPEEISPEEALCRKLEADAKLNAEARACTGSLA 80 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (629)
||+|++|++.++|+++++++.+.+. +.....+... ......+...+++..+++.... +.+|+++|.+.
T Consensus 1 ~~~~~~k~k~~~~~a~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~vd~~~~~l~~~~~~-~~~~~~tg~l~ 68 (614)
T KOG0927|consen 1 MPSDASKLKSAAKKAAAKARKGRKS-KPSRKPSTNV----------AAASEETEVDALADELESLELI-AKARSVTGNLF 68 (614)
T ss_pred CccchHHHHHHHhhhhhcccccccc-CcccccCccc----------cccccchhhHHHHhhhHHHHhH-Hhhhhcccccc
Confidence 7999999999999877777755441 1111111000 0011234455666666665555 78899999999
Q ss_pred cCCCceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcch
Q psy10512 81 VHPKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 81 ~~~~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
++|.++++.++|++++|.+..+++|++|++++|++|||||+|||||||+|++|+|.+.|.|.++.++.+.+++.++..++
T Consensus 69 s~~~s~dvk~~sls~s~~g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~~~d~y~ls~e~~ps~~~a 148 (614)
T KOG0927|consen 69 SHPISRDVKIESLSLSFHGVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPEHIDFYLLSREIEPSEKQA 148 (614)
T ss_pred cCcccccceeeeeeeccCCceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCcccchhhhcccCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888887
Q ss_pred hhhhh-hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHH
Q psy10512 161 LTCVM-EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRM 239 (629)
Q Consensus 161 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrq 239 (629)
+..+. ..+..+.++....+.+....+....+.+..+|.++..++.+..+.++..+|..+||..+++++.+.+||||||+
T Consensus 149 v~~v~~~~~~e~~rle~~~E~l~~~~d~~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~~m~~k~~~~~SgGwrm 228 (614)
T KOG0927|consen 149 VQAVVMETDHERKRLEYLAEDLAQACDDKEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLSEMQDKKVKDLSGGWRM 228 (614)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCHhHHHHHhhccCchHHH
Confidence 77776 66777888887777766543444556677788888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCC-EEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKR-ILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~-tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
|++|||+|+.+|++|||||||||||++++.||+++|.++.. ++|+++|+.+|++.+|++|++|+++++++|+|||+.|.
T Consensus 229 R~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~d~~~lVi~sh~QDfln~vCT~Ii~l~~kkl~~y~Gnydqy~ 308 (614)
T KOG0927|consen 229 RAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKYDRIILVIVSHSQDFLNGVCTNIIHLDNKKLIYYEGNYDQYV 308 (614)
T ss_pred HHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhccCceEEEEecchhhhhhHhhhhheecccceeeecCCHHHHh
Confidence 99999999999999999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCC
Q psy10512 319 KTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPP 398 (629)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (629)
..+.+..++|+++|+|+++++.+++.++++++++.++++++++++++.+++|...++.+++..++...|.||.++..++|
T Consensus 309 ~tr~E~~~~q~K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~s~~K~~~km~~~gL~ek~~~~k~l~~~f~~vg~~p~p 388 (614)
T KOG0927|consen 309 KTRSELEENQMKAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQSKEKTLDKMEADGLTEKVVGEKVLSFRFPEVGKIPPP 388 (614)
T ss_pred hHHHHHhHHHHHHHHHHHhHHHHhhHHHHhhcccchhhhHHHhhhhhhHHHHhhccccccccCCceEEEEcccccCCCCC
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccC
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLD 478 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 478 (629)
+|.+.|++|+|+++ ++++++++|.|+.++++++|||||||||||||+++|.+.|+.|.|..+.+.+++++.|+..+.++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~~~~~y~Qh~~e~ld 467 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHNKLPRYNQHLAEQLD 467 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccccchhhhhhhHhhcC
Confidence 99999999999754 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHH
Q psy10512 479 LDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDA 558 (629)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~ 558 (629)
++.++.+++...++.....+.++.+|++|||++.....|+++||+|||.||+||++++.+|+||||||||||||++++..
T Consensus 468 l~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~ 547 (614)
T KOG0927|consen 468 LDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDA 547 (614)
T ss_pred cchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHH
Confidence 99999999988887556778899999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHHHHHHHHHHhhhh
Q psy10512 559 LADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETLRAKVLKEKNKSA 621 (629)
Q Consensus 559 l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 621 (629)
+.++|++|.++||+||||+.++.+++++||+|.+|.+..|+|++..|++++..+...+..+.+
T Consensus 548 laeaiNe~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk~~l~~~~~~e~~~~~ 610 (614)
T KOG0927|consen 548 LAEAINEFPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYKEHLKKKRAKEDEREA 610 (614)
T ss_pred HHHHHhccCCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHHHHHHHHHhhhhHhhH
Confidence 999999999999999999999999999999999999999999999999999888777666544
No 2
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.6e-100 Score=834.05 Aligned_cols=515 Identities=40% Similarity=0.660 Sum_probs=437.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceE------EEeecccCCCCCc-c
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHID------IFHLTREMPASDK-S 159 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~------i~~~~~~~~~~~~-~ 159 (629)
+|.++|++++||++.+|+|+||+|.+|++|||||+||||||||||+|+|.+.|++|+|. +.++.|+....+. +
T Consensus 3 ~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 3 MITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred eEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCCCcc
Confidence 69999999999999999999999999999999999999999999999999999999875 4556666655433 4
Q ss_pred hhhhhhhchHHHHHHHHHHHHHhc-cCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHH
Q psy10512 160 ALTCVMEVDEERVRLEKLAEQLVA-CEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWR 238 (629)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqr 238 (629)
.+..+.........+......... ..+. ....+..+...+..++.+..+.++..+|..+||+.. ++++++||||||
T Consensus 83 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSGG~r 159 (530)
T COG0488 83 VLDYVIEGFGELRELLAELEEAYALLADP-DDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSGGWR 159 (530)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhcccc-hhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCHHHH
Confidence 444444333222222222122211 1111 111222222233445557788999999999999854 899999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
+||+||+||+.+||||||||||||||.+++.||+++|+++.+|+|+||||++|++.+|++|+.++.|++..|.|||+.|.
T Consensus 160 ~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~~~~ 239 (530)
T COG0488 160 RRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYSSYL 239 (530)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCHHHHH
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhc-CCCcccccCcceEEeccCCCC-CC
Q psy10512 319 KTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQ-GLTDKVTTDKTVTFTFPSCGK-IP 396 (629)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 396 (629)
+++.+....+.+.+..+++.++++++|+.++...+.+ +++++++.+.+++|... ....+........+.|+..+. .+
T Consensus 240 ~~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~-~k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g 318 (530)
T COG0488 240 EQKAERLRQEAAAYEKQQKELAKEQEWIRRGKAAASK-AKKAKSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLG 318 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHhhhhhcccccccccceeeccCCcccCC
Confidence 9999999999999999999999999999998776655 57899999999999853 112222223445567777663 67
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcc
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHEL 476 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~ 476 (629)
+++++++|+++.|+++ ..+++++||.|.+|++||||||||+|||||||+|+|...|.+|.|.+.....++|+.|+....
T Consensus 319 ~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~v~igyf~Q~~~~l 397 (530)
T COG0488 319 KLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGETVKIGYFDQHRDEL 397 (530)
T ss_pred CeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCceEEEEEEehhhhc
Confidence 8899999999999654 458999999999999999999999999999999999999999999999889999999998544
Q ss_pred cCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHH
Q psy10512 477 LDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETI 556 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~ 556 (629)
. .+.++.+++....+. ..+..++.+|++|+|++....+++..||||||.||.||++++.+|+||||||||||||++++
T Consensus 398 ~-~~~t~~d~l~~~~~~-~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~ 475 (530)
T COG0488 398 D-PDKTVLEELSEGFPD-GDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESL 475 (530)
T ss_pred C-ccCcHHHHHHhhCcc-ccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHH
Confidence 4 667899998876654 23678999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHH
Q psy10512 557 DALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETL 609 (629)
Q Consensus 557 ~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 609 (629)
+.|.++|.+|.+|||+||||.+|+..+|+++|++.+ .+..+.|+|++|.+..
T Consensus 476 ~aLe~aL~~f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~ 527 (530)
T COG0488 476 EALEEALLDFEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQK 527 (530)
T ss_pred HHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhh
Confidence 999999999999999999999999999999999999 8888899999998753
No 3
>KOG0062|consensus
Probab=100.00 E-value=2.2e-97 Score=774.05 Aligned_cols=501 Identities=45% Similarity=0.757 Sum_probs=448.7
Q ss_pred CceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 84 KSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 84 ~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
.+.+|.+.+++..||++.+|.+.++++..|.+|||+|+||+|||||||+|+. |++.+++..+++...+......
T Consensus 77 ~~~Di~~~~fdLa~G~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~------~~v~~f~veqE~~g~~t~~~~~ 150 (582)
T KOG0062|consen 77 KSKDIHIDNFDLAYGGKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIAN------GQVSGFHVEQEVRGDDTEALQS 150 (582)
T ss_pred cccceeeeeeeeeecchhhhcCCceeeecccccceeCCCCCcHHHHHHHHHh------cCcCccCchhheeccchHHHhh
Confidence 4678999999999999999999999999999999999999999999999986 7787777777776665555555
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
+...|..+..+......+. ..+ ..++...++|..+||+++++.+++.+||||||||++|
T Consensus 151 ~l~~D~~~~dfl~~e~~l~---------------~~~------~l~ei~~~~L~glGFt~emq~~pt~slSGGWrMrlaL 209 (582)
T KOG0062|consen 151 VLESDTERLDFLAEEKELL---------------AGL------TLEEIYDKILAGLGFTPEMQLQPTKSLSGGWRMRLAL 209 (582)
T ss_pred hhhccHHHHHHHHhhhhhh---------------ccc------hHHHHHHHHHHhCCCCHHHHhccccccCcchhhHHHH
Confidence 5555544433321111110 000 2233344599999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLE 323 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~~~ 323 (629)
||||+.+||||||||||||||..++.||+++|..|+.|+|+||||..|++.+|+.||++++-++.+|.|||+.|.+++.+
T Consensus 210 ARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~~T~liVSHDr~FLn~V~tdIIH~~~~kL~~YkGN~~~Fvk~k~E 289 (582)
T KOG0062|consen 210 ARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWKITSLIVSHDRNFLNTVCTDIIHLENLKLDYYKGNYSQFVKTKPE 289 (582)
T ss_pred HHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCCceEEEEeccHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC-CCCCCCCeEEE
Q psy10512 324 LLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS-CGKIPPPVIMV 402 (629)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 402 (629)
...+++++|+.++.++++++.++.+|++++++ +..++|+.+.+++++. ..++..+..+.|.||. +....+|+|++
T Consensus 290 ~~~n~qrefe~q~~~R~h~q~fid~FrYna~r-a~svqSRIk~L~kl~~---lk~~~~~~~~~~~fP~~~e~~~~p~l~i 365 (582)
T KOG0062|consen 290 AKKNQQREFEVQMKYRAHLQVFIDKFRYNAAR-ASSVQSRIKMLGKLPA---LKSTLIEVLIGFLFPTEGEVLSPPNLRI 365 (582)
T ss_pred hhhhhhhhcchHHHHHHHHHHHHHHhccCccc-chhHHHHHHHhccCCC---CCccceecccceecCCCCCcCCCCeeEE
Confidence 99999999999999999999999999999888 7789999999998876 5556666677889998 56678899999
Q ss_pred EEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCCCCC
Q psy10512 403 QNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDIS 482 (629)
Q Consensus 403 ~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~ 482 (629)
.+|+|.|+++..+++.++++++...++++++|+||+||||+++++.|.+.|..|.+.++++.+++|+.|+..+.++...+
T Consensus 366 ~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~r~ri~~f~Qhhvd~l~~~v~ 445 (582)
T KOG0062|consen 366 SYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHPRLRIKYFAQHHVDFLDKNVN 445 (582)
T ss_pred EeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecccceecchhHhhhhHHHHHhH
Confidence 99999998766457999999999999999999999999999999999999999999999999999999998888887788
Q ss_pred HHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHH
Q psy10512 483 PLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADA 562 (629)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~ 562 (629)
..+++...+|+ ..+++++..|+.|||++....+++.+||||||-||+||.+.+.+|++|||||||||||.++..+|..+
T Consensus 446 ~vd~~~~~~pG-~~~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~A 524 (582)
T KOG0062|consen 446 AVDFMEKSFPG-KTEEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKA 524 (582)
T ss_pred HHHHHHHhCCC-CCHHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHH
Confidence 88888888887 47888999999999999998888999999999999999999999999999999999999999999999
Q ss_pred HhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHHHHHHHHH
Q psy10512 563 INDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETLRAKVLKE 616 (629)
Q Consensus 563 l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~ 616 (629)
|+.|+++||+||||.+|+..+|+++|++++|+|..++|+..+|++.+..++...
T Consensus 525 l~~F~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~yKkl~~~e~~~~ 578 (582)
T KOG0062|consen 525 LKNFNGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDKYKKLLGAELRAK 578 (582)
T ss_pred HHhcCCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999998887666554
No 4
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-93 Score=807.39 Aligned_cols=512 Identities=38% Similarity=0.659 Sum_probs=407.3
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEe------ecccCCCCCcch
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH------LTREMPASDKSA 160 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~------~~~~~~~~~~~~ 160 (629)
+|.++||+++|+++.+|+||||+|++|+++|||||||||||||||+|+|++.|++|+|.+.. +.+.......+.
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~~~ 80 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQPA 80 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCCH
Confidence 38899999999999999999999999999999999999999999999999999999987643 222111111122
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
+..+..... .+......+...........+......+...+......++..+|+.+||..+..++++.+||||||||
T Consensus 81 ~~~v~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerqR 157 (638)
T PRK10636 81 LEYVIDGDR---EYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMR 157 (638)
T ss_pred HHHHHHhhH---HHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHHH
Confidence 222221111 01000000000000000001111111111222334567889999999996456789999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHH
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
|+|||||+.+|+||||||||||||+.++.||+++|+++++|||+||||++|+..+||+|++|++|++..|.|+|+.|...
T Consensus 158 v~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~~~ 237 (638)
T PRK10636 158 LNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSFEVQ 237 (638)
T ss_pred HHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeE
Q psy10512 321 RLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVI 400 (629)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 400 (629)
+.+....+.+.|..+++.++++++|+.+++..+.+ +++++++.+.+++|.. ..+........+.|+.....+.++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~a~~-~~~a~~r~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 313 (638)
T PRK10636 238 RATRLAQQQAMYESQQERVAHLQSYIDRFRAKATK-AKQAQSRIKMLERMEL---IAPAHVDNPFHFSFRAPESLPNPLL 313 (638)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-HHHHHHHHHHHHHhhc---ccccccCCceeEecCCCccCCCceE
Confidence 88888888889999999999999999886654433 5667788888887653 1121112355667766555567899
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCCC
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLD 480 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~ 480 (629)
+++||++.|++ ..+|+++||+|.+|+++||+|||||||||||++|+|+++|++|+|.+++...++|++|+....+...
T Consensus 314 ~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~igy~~Q~~~~~l~~~ 391 (638)
T PRK10636 314 KMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEFLRAD 391 (638)
T ss_pred EEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCCEEEEEecCcchhhCCcc
Confidence 99999999953 3489999999999999999999999999999999999999999999976678999999743333444
Q ss_pred CCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHH
Q psy10512 481 ISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALA 560 (629)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~ 560 (629)
.++.+++....+. .....++.+|+.|++......+++.+|||||||||+||++|+.+|+||||||||||||+.+++.|.
T Consensus 392 ~~~~~~~~~~~~~-~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~ 470 (638)
T PRK10636 392 ESPLQHLARLAPQ-ELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALT 470 (638)
T ss_pred chHHHHHHHhCch-hhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHH
Confidence 5666654322222 335678899999999754456788999999999999999999999999999999999999999999
Q ss_pred HHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 561 DAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 561 ~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
++|.++++|||+||||++++..+||+|++|++|+++.+.|++++|.+.
T Consensus 471 ~~L~~~~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 518 (638)
T PRK10636 471 EALIDFEGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQW 518 (638)
T ss_pred HHHHHcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHHH
Confidence 999999889999999999999999999999999998889999999653
No 5
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.5e-90 Score=789.88 Aligned_cols=518 Identities=45% Similarity=0.784 Sum_probs=406.2
Q ss_pred CceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCC---CCCCCceEEEeecccCCCCCcch
Q psy10512 84 KSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNRE---VPVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 84 ~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~---~p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
.+.+|+++||+++|+++.+|+|+||+|++|+++||||||||||||||++|+|.. .|..| .+.++.|++...+.+.
T Consensus 174 ~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p~~g--~I~~~~Q~~~g~~~t~ 251 (718)
T PLN03073 174 AIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNC--QILHVEQEVVGDDTTA 251 (718)
T ss_pred CceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCCCC--EEEEEeccCCCCCCCH
Confidence 456799999999999889999999999999999999999999999999999964 34444 4555566544333333
Q ss_pred hhhhhhchHHHHH-----HHHHHHHHh--cc--------------CChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhC
Q psy10512 161 LTCVMEVDEERVR-----LEKLAEQLV--AC--------------EDDESQEQLMDIYDRLDDISADTAEARAANILHGL 219 (629)
Q Consensus 161 ~~~~~~~~~~~~~-----~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~l 219 (629)
...+...+..+.. .....+... .. +.......+..++..+...+.+.+++++..+|..+
T Consensus 252 ~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~~l 331 (718)
T PLN03073 252 LQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILAGL 331 (718)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHC
Confidence 3332222111111 111111100 00 00111122333444455555667888999999999
Q ss_pred CCCchhhhcccCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhccee
Q psy10512 220 GFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNI 299 (629)
Q Consensus 220 gl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~i 299 (629)
||.....++++.+|||||||||+|||||+.+|+||||||||||||+.++.||+++|++++.|||+||||++++..+||+|
T Consensus 332 gl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~l~~~~d~i 411 (718)
T PLN03073 332 SFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDI 411 (718)
T ss_pred CCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEE
Confidence 99766778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCeEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCccc
Q psy10512 300 IHLDKRKLKYYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKV 379 (629)
Q Consensus 300 i~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 379 (629)
++|++|++..|+|+|+.|...+.+....+.++|+.+++++++++.++.++..++.+ +..++++.+.++++.. ..++
T Consensus 412 ~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~~~~~a~~-~~~~~s~~k~l~~~~~---~~~~ 487 (718)
T PLN03073 412 LHLHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDKFRYNAKR-ASLVQSRIKALDRLGH---VDAV 487 (718)
T ss_pred EEEECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hHHHhhcchHHHHHhh---hhcc
Confidence 99999999999999999999988888889999999999999999998887655443 3445555555555432 1111
Q ss_pred ccCcceEEeccCCC-CCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEE
Q psy10512 380 TTDKTVTFTFPSCG-KIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMV 458 (629)
Q Consensus 380 ~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i 458 (629)
.......+.+|... ..+.++|+++||++.|+++. .+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|
T Consensus 488 ~~~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~~-~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I 566 (718)
T PLN03073 488 VNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGP-LLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTV 566 (718)
T ss_pred ccCCCceeecCCCccCCCCceEEEEeeEEEeCCCC-eeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceE
Confidence 11223344555432 23357899999999995433 48999999999999999999999999999999999999999999
Q ss_pred EECCceeEEeeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccC
Q psy10512 459 RKNSHLRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 459 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 538 (629)
.+++...++|++|+....+....+....+...++. ...+.++.+|+.||+.+....+++.+|||||||||+|||+|+.+
T Consensus 567 ~~~~~~~igyv~Q~~~~~l~~~~~~~~~~~~~~~~-~~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~ 645 (718)
T PLN03073 567 FRSAKVRMAVFSQHHVDGLDLSSNPLLYMMRCFPG-VPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKK 645 (718)
T ss_pred EECCceeEEEEeccccccCCcchhHHHHHHHhcCC-CCHHHHHHHHHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcC
Confidence 99887889999997532222222222222222222 23567889999999975444568899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHH
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETL 609 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 609 (629)
|++|||||||||||+.+++.+.+.|.++++|||+||||++++..+||++|+|++|+++.+.|++++|++.+
T Consensus 646 p~lLLLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~~~ 716 (718)
T PLN03073 646 PHILLLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKKTL 716 (718)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHHh
Confidence 99999999999999999999999999888899999999999999999999999999987899999987654
No 6
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=6.6e-89 Score=777.36 Aligned_cols=511 Identities=28% Similarity=0.485 Sum_probs=397.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEee------cccCCCCC-cc
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHL------TREMPASD-KS 159 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~------~~~~~~~~-~~ 159 (629)
+|+++||+++|+++.+|+||||+|++|+++||+|||||||||||++|+|++.|++|+|.+... .+...... ..
T Consensus 3 ~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~~~~~ 82 (635)
T PRK11147 3 LISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRNVEGT 82 (635)
T ss_pred EEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCCCCCC
Confidence 599999999999999999999999999999999999999999999999999999999876431 11110100 11
Q ss_pred hhhhhhhchHHHHHHHHHHHHHhc-cCChhHHHHH---HHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCCh
Q psy10512 160 ALTCVMEVDEERVRLEKLAEQLVA-CEDDESQEQL---MDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235 (629)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 235 (629)
....+................+.. ........++ ..+...+..........++.++|+.+||. .++++.+|||
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~~~~~~~LSg 159 (635)
T PRK11147 83 VYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---PDAALSSLSG 159 (635)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---CCCchhhcCH
Confidence 111110000000000000001100 0000000111 11111122222234567889999999996 3788999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
||||||+|||||+.+|+||||||||||||+.++.||+++|++++.|||+||||++++..+||+|++|++|+++.+.|+|+
T Consensus 160 GekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~ 239 (635)
T PRK11147 160 GWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVSYPGNYD 239 (635)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEecCCHH
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCC
Q psy10512 316 AFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKI 395 (629)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (629)
.|..++.+..+.+..++..++++++++..|+.+ +..+.+ +++ +++.+.++++.... ..+........+.|+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~-~~~-~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 315 (635)
T PRK11147 240 QYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQ-GIKARR-TRN-EGRVRALKALRRER-SERREVMGTAKMQVEEASRS 315 (635)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhh-hhH-HHHHHHHHHhhhhh-ccccccCCceeEEeCCCCCC
Confidence 999988888877788888888888888888876 332222 233 55666666654211 11111123456677765555
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhc
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHE 475 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~ 475 (629)
+.++|+++||++.|++ ..+|+++||+|.+|+++||+|||||||||||++|+|+++|++|+|.++....++|++|+. .
T Consensus 316 ~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~i~y~~q~~-~ 392 (635)
T PRK11147 316 GKIVFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHCGTKLEVAYFDQHR-A 392 (635)
T ss_pred CCceEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCCcEEEEEeCcc-c
Confidence 6779999999999963 348999999999999999999999999999999999999999999996566899999975 2
Q ss_pred ccCCCCCHHHHHhhcCCC---hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCC
Q psy10512 476 LLDLDISPLDYMLQSFPE---VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLD 552 (629)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD 552 (629)
.+....|+.+++...... ......+..+|+.|++......+++.+|||||||||+||++|+.+|+||||||||||||
T Consensus 393 ~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~~LD 472 (635)
T PRK11147 393 ELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLD 472 (635)
T ss_pred ccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 355667888877543211 11245678899999997544567889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEe-CCEEEEecCCHHHHHH
Q psy10512 553 METIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICE-NGKVTKWEGNILDYKE 607 (629)
Q Consensus 553 ~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~-~G~i~~~~g~~~~~~~ 607 (629)
+.+++.|.++|.++++|||+||||++++..+||+|++|+ +|+++.|.|+|++|.+
T Consensus 473 ~~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 473 VETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HHHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 999999999999998899999999999999999999998 8999999999999965
No 7
>KOG0066|consensus
Probab=100.00 E-value=2.3e-88 Score=689.16 Aligned_cols=523 Identities=44% Similarity=0.771 Sum_probs=456.2
Q ss_pred CceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 84 KSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 84 ~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
.+++|.|+|++++-.++.+|.|.||.|-.|.+||||||||-||||||+.|+..-..+|.+|.+.+..+++...+.+++..
T Consensus 261 na~DIKiEnF~ISA~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~RalaIPpnIDvLlCEQEvvad~t~Ai~t 340 (807)
T KOG0066|consen 261 NAMDIKIENFDISAQGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALAIPPNIDVLLCEQEVVADSTSAIDT 340 (807)
T ss_pred hcccceeeeeeeecccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhccCCCCCceEeeeeeeeecCcHHHHH
Confidence 35689999999999999999999999999999999999999999999999988778889999999999998888888888
Q ss_pred hhhchHHHHHHHHHHHHHhc---cCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVA---CEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
+...+..|..+......+.. ..+.+..+.+-.+++.+..++.+.++.+++.+|..+||+.++++++...+|||||+|
T Consensus 341 vl~aD~kRl~lLeee~~L~~q~e~Gd~taaErl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ~rPt~kFSGGWRMR 420 (807)
T KOG0066|consen 341 VLKADKKRLALLEEEAKLMSQIEEGDTTAAERLKEVADELRAIGADSAEARARRILAGLGFSKEMQERPTTKFSGGWRMR 420 (807)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHhcCCccccCCceeee
Confidence 88887777666544433322 234456677778888888888888999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHH
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
|+|||||+..|.+|.|||||||||..++.||-++|..|.+|++|||||..|++.+|+.||+|++.++.+|.|||..|.+.
T Consensus 421 vSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkLhyYrGNY~~FKKm 500 (807)
T KOG0066|consen 421 VSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLHYYRGNYTLFKKM 500 (807)
T ss_pred hhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhhheeEEEecccchHHHHHHHHhhhhhhhhhhhcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhc-----------C---CCcccccCcceE
Q psy10512 321 RLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQ-----------G---LTDKVTTDKTVT 386 (629)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~---~~~~~~~~~~~~ 386 (629)
..+......++|+.++++++.++.. | .+.+ ....+.++....+.... + +. ..+++..+.
T Consensus 501 Y~Qk~~e~~K~yekQeK~LkelKa~----G-kS~K-qAEkq~Ke~ltrKq~K~~~Knq~dded~gapELL-~RpKEY~Vk 573 (807)
T KOG0066|consen 501 YAQKMQEHEKNYEKQEKQLKELKAE----G-KSAK-QAEKQVKEQLTRKQKKGGKKNQNDDEDAGAPELL-QRPKEYSVK 573 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----C-cchH-HHHHHHHHHHHHHHHhccccccCccccccCHHHH-hCchheEEE
Confidence 8888888889999998887776542 1 1111 11111111111111110 0 11 123456789
Q ss_pred EeccCCCCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeE
Q psy10512 387 FTFPSCGKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRF 466 (629)
Q Consensus 387 ~~~~~~~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~ 466 (629)
|.||.+.++.+|+|-+.+|+|.|++..+ +|..++|.|.-.++||||||||.||||||++|.|-+.|+.|+.+.+.++++
T Consensus 574 F~FPep~~L~PPvLGlH~VtFgy~gqkp-LFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKnhrL~i 652 (807)
T KOG0066|consen 574 FQFPEPTKLNPPVLGLHDVTFGYPGQKP-LFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKNHRLRI 652 (807)
T ss_pred EecCCCCCCCCCeeecccccccCCCCCc-hhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhccceeee
Confidence 9999999999999999999999976554 899999999999999999999999999999999999999999999999999
Q ss_pred EeeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
|+|.|+..+.+....|+.+|+...|. ...+.++..|..|||......-.+..|||||+.||+||-..+..|+||||||
T Consensus 653 G~FdQh~~E~L~~Eetp~EyLqr~FN--lpyq~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLal~~PDvlILDE 730 (807)
T KOG0066|consen 653 GWFDQHANEALNGEETPVEYLQRKFN--LPYQEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELALGGPDVLILDE 730 (807)
T ss_pred echhhhhHHhhccccCHHHHHHHhcC--CChHHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHhcCCCCEEEecC
Confidence 99999999889999999999887764 3567889999999998777777788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHHHHHHHHH
Q psy10512 547 PTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETLRAKVLKE 616 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~ 616 (629)
|||+||++++.+|.++|++|.++|||||||.+++....-.+||+++..|-.++|++++|++.+...+++-
T Consensus 731 PTNNLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYkkEVLdaLGEv 800 (807)
T KOG0066|consen 731 PTNNLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYKKEVLDALGEV 800 (807)
T ss_pred CCCCcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888778999999999999999999998887776653
No 8
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-85 Score=734.05 Aligned_cols=517 Identities=30% Similarity=0.541 Sum_probs=380.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEe------ecccCCCC-Ccc
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH------LTREMPAS-DKS 159 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~------~~~~~~~~-~~~ 159 (629)
+|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|+.|++.+.+ +.++.... ..+
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~~t 80 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEEFT 80 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCCCc
Confidence 38899999999988999999999999999999999999999999999999999999987642 12221111 111
Q ss_pred hhhhhhhchHHHHHHHHHHHHHhccCC--hhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHH
Q psy10512 160 ALTCVMEVDEERVRLEKLAEQLVACED--DESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGW 237 (629)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 237 (629)
....+................+..... .............+..+.....+.++.++|+.+|+.....++++.+|||||
T Consensus 81 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGq 160 (530)
T PRK15064 81 VLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVAPGW 160 (530)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcCHHH
Confidence 111110000000000000000000000 000000011111111122223456788999999997434467899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
||||+|||||+.+|+|||||||||+||+.++.+|.+.|.+.+.|||+||||++++..+||+|++|++|+++.+.|+|+.|
T Consensus 161 ~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~ 240 (530)
T PRK15064 161 KLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGNYDEY 240 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCCHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999997778999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCC
Q psy10512 318 CKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPP 397 (629)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (629)
...+......+.+++..++.+++++..++.+....+.+ +..+.++.+.++++.... ...... ....+.++.....+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 317 (530)
T PRK15064 241 MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASK-AKQATSRAKQIDKIKLEE-VKPSSR-QNPFIRFEQDKKLHR 317 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh-hHHHHHHHHHHhhccccc-cCCccc-cCceeeCCCCCCCCC
Confidence 87766555556666777777777776665543222111 222333333333321100 000000 011122332222345
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhccc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELL 477 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~ 477 (629)
++|+++||++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++...++|++|.....+
T Consensus 318 ~~l~~~~l~~~~~~-~-~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~~~q~~~~~~ 395 (530)
T PRK15064 318 NALEVENLTKGFDN-G-PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSENANIGYYAQDHAYDF 395 (530)
T ss_pred ceEEEEeeEEeeCC-c-eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEcccccccC
Confidence 68999999999963 3 489999999999999999999999999999999999999999999998888999999764334
Q ss_pred CCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHH
Q psy10512 478 DLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETID 557 (629)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~ 557 (629)
....++.+++..........+.+.++|+.+|+.....++++.+|||||||||+|||||+.+|+||||||||+|||+.+++
T Consensus 396 ~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~ 475 (530)
T PRK15064 396 ENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIE 475 (530)
T ss_pred CCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHH
Confidence 44567777654211111234568899999999533446688999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 558 ALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 558 ~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
.+.+.|.++++|||+||||++++..+||++++|++|+++.+.|++.++.+.
T Consensus 476 ~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 476 SLNMALEKYEGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999999999889999999999999999999999999998788998877543
No 9
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1e-84 Score=733.17 Aligned_cols=528 Identities=27% Similarity=0.407 Sum_probs=391.4
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEE------eecccCCCCC-c
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF------HLTREMPASD-K 158 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~------~~~~~~~~~~-~ 158 (629)
+|+++||+++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+. ++.++....+ .
T Consensus 6 ~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~ 85 (556)
T PRK11819 6 IYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDPEK 85 (556)
T ss_pred EEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCC
Confidence 699999999998 7889999999999999999999999999999999999999999998653 2333221111 1
Q ss_pred chhhhhhhchHHHHHHHHHHHHHh--ccCChhHH----HHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCC
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQLV--ACEDDESQ----EQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKD 232 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 232 (629)
+....+.................. ........ .....+...+...+......++.++++.+|+. . .++++.+
T Consensus 86 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~-~~~~~~~ 163 (556)
T PRK11819 86 TVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP-P-WDAKVTK 163 (556)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC-c-ccCchhh
Confidence 111111000000000000000000 00000000 00011111122222234456788999999995 3 6889999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||||||+|||||+.+|+|||||||||+||+.++.++.+.|++++.|||+||||++++..+||+|++|++|+++.+.|
T Consensus 164 LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i~~~~g 243 (556)
T PRK11819 164 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEG 243 (556)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999988899
Q ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCC
Q psy10512 313 NYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSC 392 (629)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (629)
+|+.|...+......+...+.+.++.++++..++.+... .+ ....++..+.++++... .+........+.++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 317 (556)
T PRK11819 244 NYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPK--AR-QAKSKARLARYEELLSE---EYQKRNETNEIFIPPG 317 (556)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHhhcc---cccccCCCceeecCCC
Confidence 999998877766666666777777777766666553210 01 11122333334443221 1111111223334443
Q ss_pred CCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccc
Q psy10512 393 GKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQH 472 (629)
Q Consensus 393 ~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~ 472 (629)
+....++|+++||++.|++ . .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++...++|++|.
T Consensus 318 ~~~~~~~l~~~~l~~~~~~-~-~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~q~ 395 (556)
T PRK11819 318 PRLGDKVIEAENLSKSFGD-R-LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGETVKLAYVDQS 395 (556)
T ss_pred CCCCCeEEEEEeEEEEECC-e-eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEeCc
Confidence 3334578999999999963 3 4899999999999999999999999999999999999999999999766679999997
Q ss_pred hhcccCCCCCHHHHHhhcCC--C-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q psy10512 473 LHELLDLDISPLDYMLQSFP--E-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~ 549 (629)
.. .+....|+.+++..... . ......++.+++.+|+.....++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 396 ~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 474 (556)
T PRK11819 396 RD-ALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTN 474 (556)
T ss_pred hh-hcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 52 34556788887653211 1 01233456789999996544456789999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeC-CEEEEecCCHHHHHHHHHHHHHHHHhhhhhhhh
Q psy10512 550 HLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICEN-GKVTKWEGNILDYKETLRAKVLKEKNKSAAVSN 625 (629)
Q Consensus 550 ~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~-G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (629)
|||+.++..|.+.|.++.++||+||||++++..+||+|++|++ |++..+.|++++|.+...+........++++.-
T Consensus 475 ~LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (556)
T PRK11819 475 DLDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDKKRRLGADAARPHRIKY 551 (556)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHHHHHHHHHHhhHHHHhh
Confidence 9999999999999999988999999999999999999999996 899888999999988765555555555555543
No 10
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.2e-84 Score=727.36 Aligned_cols=528 Identities=27% Similarity=0.417 Sum_probs=389.8
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEE------eecccCCCC-Cc
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF------HLTREMPAS-DK 158 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~------~~~~~~~~~-~~ 158 (629)
+|+++||+++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+..|+.|+|.+. ++.++.... ..
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~ 83 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDPTK 83 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCCCC
Confidence 599999999998 7789999999999999999999999999999999999999999988653 223322111 11
Q ss_pred chhhhhhhchHHHHHHHHHHHHHh--ccCChhHHH----HHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCC
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQLV--ACEDDESQE----QLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKD 232 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 232 (629)
+....+.................. ......... ....+...+...+......++.++++.+|+. . .++++.+
T Consensus 84 tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~-~~~~~~~ 161 (552)
T TIGR03719 84 TVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP-P-WDADVTK 161 (552)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC-c-ccCchhh
Confidence 111111100000000000000000 000000000 0011111222233333456788899999995 3 5788999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||||||+|||||+.+|+|||||||||+||+.++.+|.+.|++++.|||+||||++++..+||++++|++|+++.+.|
T Consensus 162 LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~~~~g 241 (552)
T TIGR03719 162 LSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEG 241 (552)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999988889
Q ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCC
Q psy10512 313 NYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSC 392 (629)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (629)
+|+.|...+....+.+..++.+.++++.++..++.+.... .+ ...++..+.++++... .+........+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 315 (552)
T TIGR03719 242 NYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSSPKA-RQ--AKSKARLARYEELLSQ---EFQKRNETAEIYIPPG 315 (552)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HH--HHHHHHHHHHHhhhhh---cccccCCCceeecCCC
Confidence 9999988776666666666776667666666555431110 00 0111222223322211 0111111122334433
Q ss_pred CCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccc
Q psy10512 393 GKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQH 472 (629)
Q Consensus 393 ~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~ 472 (629)
.....++|+++|+++.|++ . .+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++...++|++|.
T Consensus 316 ~~~~~~~l~~~~l~~~~~~-~-~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~~~~i~~v~q~ 393 (552)
T TIGR03719 316 PRLGDKVIEAENLSKGFGD-K-LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGETVKLAYVDQS 393 (552)
T ss_pred CCCCCeEEEEeeEEEEECC-e-eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECCceEEEEEeCC
Confidence 2234578999999999963 3 4899999999999999999999999999999999999999999999766679999997
Q ss_pred hhcccCCCCCHHHHHhhcCC--C-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q psy10512 473 LHELLDLDISPLDYMLQSFP--E-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~ 549 (629)
.. .+....|+.+++..... . ......++.+++.+|+.....++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 394 ~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~ 472 (552)
T TIGR03719 394 RD-ALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTN 472 (552)
T ss_pred cc-ccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Confidence 42 24456788887654321 1 11133466899999996544456789999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeC-CEEEEecCCHHHHHHHHHHHHHHHHhhhhhhhh
Q psy10512 550 HLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICEN-GKVTKWEGNILDYKETLRAKVLKEKNKSAAVSN 625 (629)
Q Consensus 550 ~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~-G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (629)
|||+.+++.+.+.|.++.++||+||||++++..+||+|++|++ |++..+.|++++|.+.......+...+++++.-
T Consensus 473 ~LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (552)
T TIGR03719 473 DLDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEEDKKRRLGEDADQPHRIKY 549 (552)
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHHHHHHHHhhhhhhHhHhh
Confidence 9999999999999999988999999999999999999999996 688889999999988776666666666666654
No 11
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.5e-81 Score=675.42 Aligned_cols=466 Identities=23% Similarity=0.338 Sum_probs=348.8
Q ss_pred eEEEEeEEEEeCCe----eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC----CCceEEEeecccCCCCCc
Q psy10512 87 DVKIANFSITFHGC----ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV----PDHIDIFHLTREMPASDK 158 (629)
Q Consensus 87 ~i~i~nls~~y~~~----~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~----~g~i~i~~~~~~~~~~~~ 158 (629)
.|+++||++.|... .+++||||+|.+||++||||.|||||||+.++|.|++++. .|+|.+.+ .++.....
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g--~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDG--RDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECC--cchhcCCH
Confidence 69999999999642 5999999999999999999999999999999999998765 46555433 22221111
Q ss_pred chhhhhhhchHHHHHHHHHHHH-HhccCC-hhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhh-hcccCCCCh
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQ-LVACED-DESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQ-QKKTKDFSG 235 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~-~~~~~~LSG 235 (629)
.....+. ...+..++|. +..+.+ ......+...+..-.....+++.+++.++|+.+||++... ++++++|||
T Consensus 83 ~~~r~~r-----g~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSG 157 (539)
T COG1123 83 REMRKLR-----GKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSG 157 (539)
T ss_pred HHHHHhc-----cccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCc
Confidence 0000000 0000011111 111111 1122223332222222346778889999999999986544 469999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||||||.||+||+.+|++||+||||++||+..+..+.+.|+++ +.++|+||||+..+.++||||+||++|++++.|
T Consensus 158 G~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G 237 (539)
T COG1123 158 GMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETG 237 (539)
T ss_pred hHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEec
Confidence 9999999999999999999999999999999999999988654 789999999999999999999999999999988
Q ss_pred CcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC
Q psy10512 312 GNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS 391 (629)
Q Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (629)
...+.|.+. ++.|... .+...+. .............
T Consensus 238 ~~~~i~~~p--------~hpYT~~------------------------------Ll~a~p~------~~~~~~~~~~~~~ 273 (539)
T COG1123 238 PTEEILSNP--------QHPYTRG------------------------------LLAAVPR------LGDEKIIRLPRRG 273 (539)
T ss_pred CHHHHHhcc--------CCcccHH------------------------------HHhhCCC------ccccccccccccc
Confidence 765554322 1111100 0000000 0000000000000
Q ss_pred CCCCCCCeEEEEEEEEEEcCC---------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECC
Q psy10512 392 CGKIPPPVIMVQNVSFRYSDD---------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNS 462 (629)
Q Consensus 392 ~~~~~~~~l~~~~l~~~y~~~---------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~ 462 (629)
.....|+++++||+++|... ...+++||||+|.+||++||||+||||||||.|+|+|+++|++|.|.+++
T Consensus 274 -~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g 352 (539)
T COG1123 274 -PLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDG 352 (539)
T ss_pred -ccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeC
Confidence 01156899999999999631 13479999999999999999999999999999999999999999999876
Q ss_pred c-------------eeEEeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCCcccccCcCcCCh
Q psy10512 463 H-------------LRFARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSD 523 (629)
Q Consensus 463 ~-------------~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSg 523 (629)
. ..+.+++|++...+++..|+.+.+.... .....++++.++|+.+||+.....+++++|||
T Consensus 353 ~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSG 432 (539)
T COG1123 353 QDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSG 432 (539)
T ss_pred cccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCc
Confidence 3 2566788888888888888877664321 11233456889999999987656677899999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEec
Q psy10512 524 GQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWE 599 (629)
Q Consensus 524 Gqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~ 599 (629)
||||||+|||||+.+|++||+||||+.||+..+..+.++|.++ +.|+|+||||+.++..+||||++|++|+|++ .
T Consensus 433 GQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE-~ 511 (539)
T COG1123 433 GQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVE-E 511 (539)
T ss_pred chhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEE-e
Confidence 9999999999999999999999999999999999999998765 6799999999999999999999999999986 5
Q ss_pred CCHHHH
Q psy10512 600 GNILDY 605 (629)
Q Consensus 600 g~~~~~ 605 (629)
|+.+..
T Consensus 512 G~~~~v 517 (539)
T COG1123 512 GPTEKV 517 (539)
T ss_pred CCHHHH
Confidence 665443
No 12
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1e-79 Score=688.90 Aligned_cols=455 Identities=24% Similarity=0.375 Sum_probs=336.9
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCC--CCCCCceEEEe--------ecccCCCC-
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNRE--VPVPDHIDIFH--------LTREMPAS- 156 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~--~p~~g~i~i~~--------~~~~~~~~- 156 (629)
|+++|++++|+++.+|+|+||+|.+|++++|+|||||||||||++|+|++ .|+.|+|.+.+ ..+.....
T Consensus 1 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~ 80 (520)
T TIGR03269 1 IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGE 80 (520)
T ss_pred CEEEEEEEEECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccc
Confidence 57899999999889999999999999999999999999999999999996 68999988752 11100000
Q ss_pred C----cchh----hhhhhchH-----HHHHHHHHHHH-HhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCC
Q psy10512 157 D----KSAL----TCVMEVDE-----ERVRLEKLAEQ-LVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFT 222 (629)
Q Consensus 157 ~----~~~~----~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~ 222 (629)
+ ...+ ........ .+..+..+.+. ...++..+..+++...+ ........+...++.++++.+|+.
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~gl~ 159 (520)
T TIGR03269 81 PCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEAL-EEIGYEGKEAVGRAVDLIEMVQLS 159 (520)
T ss_pred ccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHcCCh
Confidence 0 0000 00000000 00001111111 01111112223322111 111233344556789999999996
Q ss_pred chhhhcccCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcce
Q psy10512 223 KEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTN 298 (629)
Q Consensus 223 ~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ 298 (629)
+..++++.+|||||||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+
T Consensus 160 -~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~ 238 (520)
T TIGR03269 160 -HRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDK 238 (520)
T ss_pred -hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCE
Confidence 5678899999999999999999999999999999999999999999998877554 67999999999999999999
Q ss_pred eEEEcCCeEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcc
Q psy10512 299 IIHLDKRKLKYYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDK 378 (629)
Q Consensus 299 ii~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 378 (629)
|++|++|+++.. |+++.+... + .... .. + .+
T Consensus 239 i~~l~~G~i~~~-g~~~~~~~~-----------~-------------~~~~----~~--------------~------~~ 269 (520)
T TIGR03269 239 AIWLENGEIKEE-GTPDEVVAV-----------F-------------MEGV----SE--------------V------EK 269 (520)
T ss_pred EEEEeCCEEeee-cCHHHHHHH-----------H-------------Hhhc----hh--------------h------cc
Confidence 999999999864 566544210 0 0000 00 0 00
Q ss_pred cccCcceEEeccCCCCCCCCeEEEEEEEEEEcC---CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCc
Q psy10512 379 VTTDKTVTFTFPSCGKIPPPVIMVQNVSFRYSD---DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSV 455 (629)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~---~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~ 455 (629)
. .....+.++|+++||++.|+. +...+|+++||+|.+|++++|+||||||||||+++|+|+++|++
T Consensus 270 ~-----------~~~~~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~ 338 (520)
T TIGR03269 270 E-----------CEVEVGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTS 338 (520)
T ss_pred c-----------cccCCCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 0 000113468999999999952 22348999999999999999999999999999999999999999
Q ss_pred cEEEEC-Cc-----------------eeEEeeccchhcccCCCCCHHHHHhhc----CCChhhHHHHHHHHHHcCCCCc-
Q psy10512 456 GMVRKN-SH-----------------LRFARYHQHLHELLDLDISPLDYMLQS----FPEVKDREEMRKIIGRYGLTGR- 512 (629)
Q Consensus 456 G~i~~~-~~-----------------~~~~~~~q~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~- 512 (629)
|+|.++ +. ..++|++|+.. +....++.+++... .+.....+.+.++++.+||...
T Consensus 339 G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 416 (520)
T TIGR03269 339 GEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYD--LYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK 416 (520)
T ss_pred eEEEEecCCccccccccchhhHHHHhhhEEEEccCcc--cCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc
Confidence 999984 31 23789998753 34557888776432 1111233567889999999742
Q ss_pred ---ccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcC
Q psy10512 513 ---QQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAE 585 (629)
Q Consensus 513 ---~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d 585 (629)
..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.+.+.|.++ +.|||+||||++++..+||
T Consensus 417 ~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d 496 (520)
T TIGR03269 417 AEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCD 496 (520)
T ss_pred chhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCC
Confidence 345688999999999999999999999999999999999999999999998653 5789999999999999999
Q ss_pred EEEEEeCCEEEEecCCHHHHHH
Q psy10512 586 EIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 586 ~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
++++|++|+++ +.|+++++.+
T Consensus 497 ~i~~l~~G~i~-~~g~~~~~~~ 517 (520)
T TIGR03269 497 RAALMRDGKIV-KIGDPEEIVE 517 (520)
T ss_pred EEEEEECCEEE-EECCHHHHHh
Confidence 99999999997 4677766543
No 13
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-80 Score=688.69 Aligned_cols=451 Identities=19% Similarity=0.246 Sum_probs=335.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCCceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP--VPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p--~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||||+|+|+++| ++|+|.+.+.. +........
T Consensus 5 ~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~--~~~~~~~~~--- 79 (506)
T PRK13549 5 LLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEE--LQASNIRDT--- 79 (506)
T ss_pred eEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEE--CCCCCHHHH---
Confidence 59999999999988999999999999999999999999999999999999986 78888775432 211100000
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh---ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD---DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
.+..+..+.++...++ ..+..++..+..... .........++.++++.+|+. +..++++.+|||||||||
T Consensus 80 -----~~~~i~~v~q~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv 152 (506)
T PRK13549 80 -----ERAGIAIIHQELALVK-ELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-INPATPVGNLGLGQQQLV 152 (506)
T ss_pred -----HHCCeEEEEeccccCC-CCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHHHH
Confidence 0000111111111111 112222222111111 112233456788999999996 567899999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..+...+ +.
T Consensus 153 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~-~~ 231 (506)
T PRK13549 153 EIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAG-MT 231 (506)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeeccccc-CC
Confidence 9999999999999999999999999999999988665 6799999999999999999999999999987654322 11
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC-CCCCCC
Q psy10512 319 KTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS-CGKIPP 397 (629)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 397 (629)
... .+..+. +.. ... .+|. ......
T Consensus 232 ~~~-------------------~~~~~~---~~~----------------------~~~----------~~~~~~~~~~~ 257 (506)
T PRK13549 232 EDD-------------------IITMMV---GRE----------------------LTA----------LYPREPHTIGE 257 (506)
T ss_pred HHH-------------------HHHHhh---CcC----------------------ccc----------cccccccCCCC
Confidence 000 000000 000 000 0000 001134
Q ss_pred CeEEEEEEEEEEcC-CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-CCccEEEECCc------------
Q psy10512 398 PVIMVQNVSFRYSD-DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-PSVGMVRKNSH------------ 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~-~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-p~~G~i~~~~~------------ 463 (629)
++|+++||++.|+. +...+|+|+||+|++|++++|+||||||||||+|+|+|+++ |++|+|.+++.
T Consensus 258 ~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~ 337 (506)
T PRK13549 258 VILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIA 337 (506)
T ss_pred ceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHH
Confidence 68999999999942 12248999999999999999999999999999999999999 59999998762
Q ss_pred eeEEeeccchh-cccCCCCCHHHHHhhc----C------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHH
Q psy10512 464 LRFARYHQHLH-ELLDLDISPLDYMLQS----F------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 464 ~~~~~~~q~~~-~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 532 (629)
..++|++|... ..+....++.+++... + ......+.+.++++.+|+.....++++.+|||||||||+||
T Consensus 338 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrv~lA 417 (506)
T PRK13549 338 QGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIARLSGGNQQKAVLA 417 (506)
T ss_pred CCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccccCCHHHHHHHHHH
Confidence 23788888753 1234456777765421 1 11112356788999999963334568899999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||+.+|+||||||||+|||+.++..+.++|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++
T Consensus 418 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 492 (506)
T PRK13549 418 KCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLK-GDLINHNL 492 (506)
T ss_pred HHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEeccccC
Confidence 9999999999999999999999999999988765 578999999999999999999999999996 46666655
No 14
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-79 Score=697.88 Aligned_cols=489 Identities=17% Similarity=0.227 Sum_probs=340.8
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhh
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
+|+++||+++|++ .++|+||||+|++|+++|||||||||||||+++|+|++.|++|.+.+.+.. +...... +.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~--~~~~~~~-~~ 88 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKML--LRRRSRQ-VI 88 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEE--ecccccc-cc
Confidence 5999999999962 579999999999999999999999999999999999999999988765421 1000000 00
Q ss_pred hhhhchH-HHH-----HHHHHHHHH--hccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc--hhhhcccCC
Q psy10512 163 CVMEVDE-ERV-----RLEKLAEQL--VACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK--EMQQKKTKD 232 (629)
Q Consensus 163 ~~~~~~~-~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~~~~~~~~ 232 (629)
.+..... ... .+..+.++. ...+..+..+++.............+...++.++|+.+||.. ...++++.+
T Consensus 89 ~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~ 168 (623)
T PRK10261 89 ELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQ 168 (623)
T ss_pred ccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCcc
Confidence 0000000 000 011111111 011112222332221111012334455678899999999963 357889999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
|||||||||+|||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 169 LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~ 248 (623)
T PRK10261 169 LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV 248 (623)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec
Confidence 9999999999999999999999999999999999999888877643 689999999999999999999999999998
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEe
Q psy10512 309 YYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFT 388 (629)
Q Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 388 (629)
.. |+++.+... ....|.. .+...+........ .......... . ......... ..
T Consensus 249 ~~-g~~~~~~~~-------~~~~~~~------~l~~~~~~~~~~~~------~~~~~~~~~~-~---~~~~~~~~~--~~ 302 (623)
T PRK10261 249 ET-GSVEQIFHA-------PQHPYTR------ALLAAVPQLGAMKG------LDYPRRFPLI-S---LEHPAKQEP--PI 302 (623)
T ss_pred cc-CCHHHhhcC-------CCChhhh------hhhhccCccccccc------ccCCcccccc-c---cccccccCc--cc
Confidence 65 454443211 0000100 00000000000000 0000000000 0 000000000 00
Q ss_pred ccCCCCCCCCeEEEEEEEEEEcCC---------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEE
Q psy10512 389 FPSCGKIPPPVIMVQNVSFRYSDD---------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459 (629)
Q Consensus 389 ~~~~~~~~~~~l~~~~l~~~y~~~---------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~ 459 (629)
++.......++|+++||++.|+.. ...+|+++||+|.+||+++|+|+||||||||+++|+|+++|++|+|.
T Consensus 303 ~~~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~ 382 (623)
T PRK10261 303 EQDTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEII 382 (623)
T ss_pred ccccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEE
Confidence 111111234789999999999521 13489999999999999999999999999999999999999999999
Q ss_pred ECCc--------------eeEEeeccchhcccCCCCCHHHHHhhc-----C-CChhhHHHHHHHHHHcCCCCcccccCcC
Q psy10512 460 KNSH--------------LRFARYHQHLHELLDLDISPLDYMLQS-----F-PEVKDREEMRKIIGRYGLTGRQQVCPIR 519 (629)
Q Consensus 460 ~~~~--------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~l~~~gl~~~~~~~~~~ 519 (629)
+++. ..++|++|+....+....++.+++... . ......+++.++|+.+||.....++++.
T Consensus 383 ~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~ 462 (623)
T PRK10261 383 FNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPH 462 (623)
T ss_pred ECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcc
Confidence 8763 147899998643455567887765421 1 1112345678999999996333456789
Q ss_pred cCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 520 QLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 520 ~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
+|||||||||+|||||+.+|+||||||||++||+.++..++++|.++ +.|||+||||++++..+||+|++|++|+|
T Consensus 463 ~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~i 542 (623)
T PRK10261 463 EFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQI 542 (623)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999998654 57899999999999999999999999999
Q ss_pred EEecCCHHHH
Q psy10512 596 TKWEGNILDY 605 (629)
Q Consensus 596 ~~~~g~~~~~ 605 (629)
+ ..|+.+++
T Consensus 543 v-~~g~~~~i 551 (623)
T PRK10261 543 V-EIGPRRAV 551 (623)
T ss_pred E-EecCHHHH
Confidence 7 46776654
No 15
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-79 Score=686.57 Aligned_cols=445 Identities=20% Similarity=0.270 Sum_probs=331.7
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|++|+++||+|||||||||||++|+|++.|++|+|.+.+.. +........
T Consensus 5 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~--i~~~~~~~~----- 77 (510)
T PRK09700 5 YISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNIN--YNKLDHKLA----- 77 (510)
T ss_pred eEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEE--CCCCCHHHH-----
Confidence 5999999999998899999999999999999999999999999999999999999998875432 211100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhh----hhc---cChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDR----LDD---ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRM 239 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~---~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrq 239 (629)
.+..+..+.+....+.. .+..++...... ... ........++.++++.+|+. +..++++.+|||||||
T Consensus 78 ---~~~~i~~v~q~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~q 152 (510)
T PRK09700 78 ---AQLGIGIIYQELSVIDE-LTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLK-VDLDEKVANLSISHKQ 152 (510)
T ss_pred ---HHCCeEEEeecccccCC-CcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCC-CCcccchhhCCHHHHH
Confidence 00001111111111111 122222211100 001 11223456788999999997 5678999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
||+|||||+.+|+||||||||++||+.++.++++.|+++ +.|||+||||++++..+||++++|++|++++. |+++.
T Consensus 153 rv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~-g~~~~ 231 (510)
T PRK09700 153 MLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS-GMVSD 231 (510)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee-cchhh
Confidence 999999999999999999999999999999999988664 68999999999999999999999999999865 44443
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC-CCCC
Q psy10512 317 FCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS-CGKI 395 (629)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 395 (629)
+.... . +... .+.... . ..... .+. ....
T Consensus 232 ~~~~~---~----------------~~~~---~~~~~~-----------------~-~~~~~----------~~~~~~~~ 261 (510)
T PRK09700 232 VSNDD---I----------------VRLM---VGRELQ-----------------N-RFNAM----------KENVSNLA 261 (510)
T ss_pred CCHHH---H----------------HHHh---cCCCcc-----------------c-ccccc----------ccccccCC
Confidence 32100 0 0000 000000 0 00000 000 0111
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
.+++|+++|+++.|. . +|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 262 ~~~~l~~~~l~~~~~---~-~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~ 337 (510)
T PRK09700 262 HETVFEVRNVTSRDR---K-KVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVK 337 (510)
T ss_pred CCcEEEEeCccccCC---C-cccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHH
Confidence 346899999998762 2 799999999999999999999999999999999999999999998762
Q ss_pred eeEEeeccchh-cccCCCCCHHHHHhhcC--------------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHH
Q psy10512 464 LRFARYHQHLH-ELLDLDISPLDYMLQSF--------------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCR 528 (629)
Q Consensus 464 ~~~~~~~q~~~-~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqr 528 (629)
..++|++|... ..+....++.+++.... ........+.++++.+|+.....++++.+||||||||
T Consensus 338 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qr 417 (510)
T PRK09700 338 KGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQK 417 (510)
T ss_pred CCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChHHHHH
Confidence 14789988742 23445678877754321 0111234577899999996333467889999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEe
Q psy10512 529 VVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKW 598 (629)
Q Consensus 529 v~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 598 (629)
|+|||||+.+|+||||||||+|||+.+++.+.++|+++ +.|||+||||++++..+||++++|++|+++..
T Consensus 418 v~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 490 (510)
T PRK09700 418 VLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQI 490 (510)
T ss_pred HHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999765 57899999999999999999999999999753
No 16
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.4e-79 Score=683.42 Aligned_cols=458 Identities=20% Similarity=0.305 Sum_probs=336.5
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCC
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASD 157 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~ 157 (629)
+|+++|++++|++ +.+|+|+||+|.+||++||+||||||||||+++|+|+++| ++|++.+.+.. +....
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~--i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGES--LLHAS 82 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEe--cccCC
Confidence 5999999999963 5799999999999999999999999999999999999986 57888775432 11100
Q ss_pred cchhhhhhhchHHH-HHHHHHHHHHh-ccCChhHHHHHHHHHhhh-hccChhhHHHHHHHHHHhCCCCc--hhhhcccCC
Q psy10512 158 KSALTCVMEVDEER-VRLEKLAEQLV-ACEDDESQEQLMDIYDRL-DDISADTAEARAANILHGLGFTK--EMQQKKTKD 232 (629)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~L~~lgl~~--~~~~~~~~~ 232 (629)
..... ..+ ..+..+.+... ...+..+..+........ ..........++.++++.+|+.. ...++++.+
T Consensus 83 ~~~~~------~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 156 (529)
T PRK15134 83 EQTLR------GVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQ 156 (529)
T ss_pred HHHHH------HHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcc
Confidence 00000 000 00111111100 011111222221111111 12233445678899999999963 246889999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
|||||||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999988763 689999999999999999999999999999
Q ss_pred EEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEe
Q psy10512 309 YYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFT 388 (629)
Q Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 388 (629)
+++++.+.+..... .+ ...+. ..... ..+
T Consensus 237 ~~g~~~~~~~~~~~--------~~---------~~~~~---------------------~~~~~---~~~---------- 265 (529)
T PRK15134 237 EQNRAATLFSAPTH--------PY---------TQKLL---------------------NSEPS---GDP---------- 265 (529)
T ss_pred EeCCHHHHhhCCCC--------HH---------HHHHH---------------------HhCcc---ccc----------
Confidence 87654332211000 00 00000 00000 000
Q ss_pred ccCCCCCCCCeEEEEEEEEEEcC---------CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEE
Q psy10512 389 FPSCGKIPPPVIMVQNVSFRYSD---------DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459 (629)
Q Consensus 389 ~~~~~~~~~~~l~~~~l~~~y~~---------~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~ 459 (629)
.+. ...+.++|+++|+++.|+. +...+|+++||+|++|+++||+||||||||||+++|+|++ |++|+|.
T Consensus 266 ~~~-~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~ 343 (529)
T PRK15134 266 VPL-PEPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQGEIW 343 (529)
T ss_pred ccc-CCCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEEE
Confidence 000 0113568999999999952 1234899999999999999999999999999999999998 4899999
Q ss_pred ECCc--------------eeEEeeccchhcccCCCCCHHHHHhhc-------CCChhhHHHHHHHHHHcCCCCcccccCc
Q psy10512 460 KNSH--------------LRFARYHQHLHELLDLDISPLDYMLQS-------FPEVKDREEMRKIIGRYGLTGRQQVCPI 518 (629)
Q Consensus 460 ~~~~--------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~ 518 (629)
+++. ..++|++|.....+....++.+++... .+.....+.+.++|+.+|+.....++++
T Consensus 344 ~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 423 (529)
T PRK15134 344 FDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRYP 423 (529)
T ss_pred ECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcCC
Confidence 8762 247899987532344557887776432 1111234567889999999633345688
Q ss_pred CcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCE
Q psy10512 519 RQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGK 594 (629)
Q Consensus 519 ~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~ 594 (629)
.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|.++ +.|||+||||++++..+||+|++|++|+
T Consensus 424 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 503 (529)
T PRK15134 424 AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGE 503 (529)
T ss_pred ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCE
Confidence 999999999999999999999999999999999999999999999754 5689999999999999999999999999
Q ss_pred EEEecCCHHHHH
Q psy10512 595 VTKWEGNILDYK 606 (629)
Q Consensus 595 i~~~~g~~~~~~ 606 (629)
++ ..|+.+++.
T Consensus 504 i~-~~~~~~~~~ 514 (529)
T PRK15134 504 VV-EQGDCERVF 514 (529)
T ss_pred EE-EEcCHHHHh
Confidence 97 467776653
No 17
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6.4e-79 Score=679.79 Aligned_cols=451 Identities=18% Similarity=0.258 Sum_probs=333.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|++|+++||+|||||||||||++|+|+++|++|+|.+.+.. +........
T Consensus 11 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~~~~~----- 83 (510)
T PRK15439 11 LLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNP--CARLTPAKA----- 83 (510)
T ss_pred eEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--CCCCCHHHH-----
Confidence 5999999999998889999999999999999999999999999999999999999998875422 111100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+..+..+.+....++. .+..++.... +. .......++.++++.+|+. +..++++.+|||||||||+||||
T Consensus 84 ---~~~~i~~v~q~~~~~~~-~tv~e~l~~~--~~--~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~a 154 (510)
T PRK15439 84 ---HQLGIYLVPQEPLLFPN-LSVKENILFG--LP--KRQASMQKMKQLLAALGCQ-LDLDSSAGSLEVADRQIVEILRG 154 (510)
T ss_pred ---HhCCEEEEeccCccCCC-CcHHHHhhcc--cc--cchHHHHHHHHHHHHcCCC-ccccCChhhCCHHHHHHHHHHHH
Confidence 00000011111111111 1222221111 11 1123456788999999997 56789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLE 323 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~~~ 323 (629)
|+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++++. |+++.+.....
T Consensus 155 L~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~-g~~~~~~~~~~- 232 (510)
T PRK15439 155 LMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALS-GKTADLSTDDI- 232 (510)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe-cChHHcCHHHH-
Confidence 99999999999999999999999999988765 68999999999999999999999999999864 56655432110
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC---CCCCCCCeE
Q psy10512 324 LLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS---CGKIPPPVI 400 (629)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l 400 (629)
. ..+. +..... . +.. .. ...+.+|. .....+++|
T Consensus 233 -----~-------------~~~~---~~~~~~---~----------~~~---~~------~~~~~~~~~~~~~~~~~~~l 269 (510)
T PRK15439 233 -----I-------------QAIT---PAAREK---S----------LSA---SQ------KLWLELPGNRRQQAAGAPVL 269 (510)
T ss_pred -----H-------------HHHh---Cccccc---c----------ccc---cc------cccccccccccccCCCCceE
Confidence 0 0000 000000 0 000 00 00011111 011235689
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEEe
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFAR 468 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~~ 468 (629)
+++|+++ . +|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 270 ~~~~l~~------~-~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~ 342 (510)
T PRK15439 270 TVEDLTG------E-GFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVY 342 (510)
T ss_pred EEeCCCC------C-CccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEE
Confidence 9999983 1 599999999999999999999999999999999999999999998763 24788
Q ss_pred eccchh-cccCCCCCHHHHHhhc------C--CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 469 YHQHLH-ELLDLDISPLDYMLQS------F--PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 469 ~~q~~~-~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|... ..+....++.+++... . ......+.+.++|+.+|+.....++++.+|||||||||+|||||+.+|
T Consensus 343 v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p 422 (510)
T PRK15439 343 LPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCLEASP 422 (510)
T ss_pred CCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHHhhCC
Confidence 988742 2234455666654211 1 111233457889999999633345688999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+||||||||+|||+.+++.+.+.|+++ +.+||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 423 ~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~-~~~~~~~~ 491 (510)
T PRK15439 423 QLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISG-ALTGAAIN 491 (510)
T ss_pred CEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-EEccccCC
Confidence 999999999999999999999998775 5789999999999999999999999999974 56555443
No 18
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-78 Score=677.30 Aligned_cols=450 Identities=21% Similarity=0.286 Sum_probs=329.7
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCCceEEEeecccCCCCCcchhhhhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP--VPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p--~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|+++|++++|+++++|+|+||+|++|+++||+|||||||||||++|+|+++| ++|++.+.+. .+.......
T Consensus 2 l~i~~l~~~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~--~~~~~~~~~----- 74 (500)
T TIGR02633 2 LEMKGIVKTFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGS--PLKASNIRD----- 74 (500)
T ss_pred EEEEeEEEEeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCE--ECCCCCHHH-----
Confidence 7899999999988999999999999999999999999999999999999886 6788776432 221110000
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh----ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD----DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
..+..+..+.+....++..+..++ ........ .........++.++++.+|+.....++++.+|||||||||
T Consensus 75 ---~~~~~i~~v~q~~~~~~~~tv~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv 150 (500)
T TIGR02633 75 ---TERAGIVIIHQELTLVPELSVAEN-IFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLV 150 (500)
T ss_pred ---HHhCCEEEEeeccccCCCCcHHHH-HHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHH
Confidence 000001111111111111122222 22111110 0122334567889999999964334677999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++.++.+.+ +.
T Consensus 151 ~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~-~~ 229 (500)
T TIGR02633 151 EIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMST-MS 229 (500)
T ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCccc-CC
Confidence 9999999999999999999999999999999987654 6799999999999999999999999999987654322 10
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC-CCCCCC
Q psy10512 319 KTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS-CGKIPP 397 (629)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 397 (629)
... .+. .+........ ++. ..+.+.
T Consensus 230 ~~~-----------------------~~~---------------------~~~~~~~~~~----------~~~~~~~~~~ 255 (500)
T TIGR02633 230 EDD-----------------------IIT---------------------MMVGREITSL----------YPHEPHEIGD 255 (500)
T ss_pred HHH-----------------------HHH---------------------HHhCcccccc----------ccccccCCCC
Confidence 000 000 0000000000 000 001234
Q ss_pred CeEEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-CccEEEECCc------------
Q psy10512 398 PVIMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-SVGMVRKNSH------------ 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-~~G~i~~~~~------------ 463 (629)
++|+++|+++.|+.+ ...+|+++||+|.+||+++|+|||||||||||++|+|+++| ++|+|.+++.
T Consensus 256 ~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~ 335 (500)
T TIGR02633 256 VILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIR 335 (500)
T ss_pred ceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHh
Confidence 589999999998421 22389999999999999999999999999999999999995 8999998762
Q ss_pred eeEEeeccchh-cccCCCCCHHHHHhhc----C------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHH
Q psy10512 464 LRFARYHQHLH-ELLDLDISPLDYMLQS----F------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 464 ~~~~~~~q~~~-~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 532 (629)
..++|++|... ..+....++.+++... + ......+.+.++++.+++.....++++.+|||||||||+||
T Consensus 336 ~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqrv~la 415 (500)
T TIGR02633 336 AGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQKAVLA 415 (500)
T ss_pred CCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHHHHHH
Confidence 24788888753 1234456776655321 1 11112356788999999964334568899999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
|||+.+|+||||||||+|||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++. ..+..+
T Consensus 416 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~-~~~~~~ 489 (500)
T TIGR02633 416 KMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKG-DFVNHA 489 (500)
T ss_pred HHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-EEcccc
Confidence 9999999999999999999999999999887665 5789999999999999999999999999974 344333
No 19
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.2e-78 Score=676.91 Aligned_cols=445 Identities=20% Similarity=0.283 Sum_probs=331.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+.+.. +........
T Consensus 4 ~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~----- 76 (501)
T PRK10762 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKE--VTFNGPKSS----- 76 (501)
T ss_pred eEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--CCCCCHHHH-----
Confidence 5999999999998899999999999999999999999999999999999999999999875432 111100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhh----hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRL----DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
.+..+..+.+....++..+..+++ ...... ..........++.++++.+|+. +..++++.+|||||||||+
T Consensus 77 ---~~~~i~~v~q~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~ 151 (501)
T PRK10762 77 ---QEAGIGIIHQELNLIPQLTIAENI-FLGREFVNRFGRIDWKKMYAEADKLLARLNLR-FSSDKLVGELSIGEQQMVE 151 (501)
T ss_pred ---HhCCEEEEEcchhccCCCcHHHHh-hhccccccccCccCHHHHHHHHHHHHHHcCCC-CCccCchhhCCHHHHHHHH
Confidence 000000111111111111222222 111111 1112233456788999999997 4678899999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHH
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCK 319 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~ 319 (629)
|||||+.+|+||||||||++||+.++.++++.|+++ +.|||+||||++++..+||+|++|++|+++..+...+ +..
T Consensus 152 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~-~~~ 230 (501)
T PRK10762 152 IAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVAD-LTE 230 (501)
T ss_pred HHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCc-CCH
Confidence 999999999999999999999999999999887654 6799999999999999999999999999987654322 110
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCe
Q psy10512 320 TRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPV 399 (629)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (629)
. ...... .........+ . .+. ...+++
T Consensus 231 ~-----------------------~~~~~~---------------------~~~~~~~~~~-----~--~~~--~~~~~~ 257 (501)
T PRK10762 231 D-----------------------SLIEMM---------------------VGRKLEDQYP-----R--LDK--APGEVR 257 (501)
T ss_pred H-----------------------HHHHHh---------------------cCCCcccccc-----c--ccc--CCCCcE
Confidence 0 000000 0000000000 0 000 113468
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEE
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFA 467 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~ 467 (629)
|+++|+++ . +|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 258 l~~~~l~~------~-~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~ 330 (501)
T PRK10762 258 LKVDNLSG------P-GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIV 330 (501)
T ss_pred EEEeCccc------C-CcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCE
Confidence 99999984 2 699999999999999999999999999999999999999999998762 2478
Q ss_pred eeccchh-cccCCCCCHHHHHhhc----C-------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 468 RYHQHLH-ELLDLDISPLDYMLQS----F-------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 468 ~~~q~~~-~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
|++|... ..+....++.+++... . ......+.+.++++.+|+.....++++.+|||||||||+|||||
T Consensus 331 ~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqrv~lA~al 410 (501)
T PRK10762 331 YISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGL 410 (501)
T ss_pred EecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 9998753 1234556777765421 0 01122456789999999953334668899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+.+|++|||||||+|||+.+++.+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+..++
T Consensus 411 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 482 (501)
T PRK10762 411 MTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRIS-GEFTREQA 482 (501)
T ss_pred hhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEE-EEeccccC
Confidence 9999999999999999999999999999876 458999999999999999999999999996 45655444
No 20
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-78 Score=677.10 Aligned_cols=448 Identities=20% Similarity=0.249 Sum_probs=331.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~--i~~~~~~~------ 75 (501)
T PRK11288 4 YLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQE--MRFASTTA------ 75 (501)
T ss_pred eEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEE--CCCCCHHH------
Confidence 5999999999998899999999999999999999999999999999999999999999875432 11100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh--hh-hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD--RL-DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
..+..+..+.+....++..+..+++ .... .. ..........++.++++.+|+. ...++++.+|||||||||+|
T Consensus 76 --~~~~~i~~v~q~~~~~~~~tv~~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGq~qrv~l 151 (501)
T PRK11288 76 --ALAAGVAIIYQELHLVPEMTVAENL-YLGQLPHKGGIVNRRLLNYEAREQLEHLGVD-IDPDTPLKYLSIGQRQMVEI 151 (501)
T ss_pred --HHhCCEEEEEechhccCCCCHHHHH-HhcccccccCCCCHHHHHHHHHHHHHHcCCC-CCcCCchhhCCHHHHHHHHH
Confidence 0000000011111111111222222 1111 00 1112334456788999999996 45688999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
||||+.+|+||||||||++||+.++.++++.|.++ +.|||+||||++++..+||+|++|++|+++..+..+......
T Consensus 152 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 231 (501)
T PRK11288 152 AKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVDRD 231 (501)
T ss_pred HHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCCHH
Confidence 99999999999999999999999999999988754 689999999999999999999999999998644322111000
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeE
Q psy10512 321 RLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVI 400 (629)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 400 (629)
. ... .+.... .... ...+ +....++++
T Consensus 232 ---~--------------------~~~---------------------~~~~~~-~~~~-------~~~~-~~~~~~~~l 258 (501)
T PRK11288 232 ---Q--------------------LVQ---------------------AMVGRE-IGDI-------YGYR-PRPLGEVRL 258 (501)
T ss_pred ---H--------------------HHH---------------------HhcCCC-cccc-------cccc-ccCCCCcEE
Confidence 0 000 000000 0000 0000 001134579
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEEe
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFAR 468 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~~ 468 (629)
+++|+++. . +|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 259 ~~~~~~~~-----~-~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 332 (501)
T PRK11288 259 RLDGLKGP-----G-LREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIML 332 (501)
T ss_pred EEeccccC-----C-cccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEE
Confidence 99999842 2 799999999999999999999999999999999999999999998763 24678
Q ss_pred eccchh-cccCCCCCHHHHHhhcC-----------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 469 YHQHLH-ELLDLDISPLDYMLQSF-----------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 469 ~~q~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
++|... ..+....++.+++.... ......+.+.++++.+|+.....++++.+|||||||||+|||||+
T Consensus 333 ~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~la~al~ 412 (501)
T PRK11288 333 CPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAILGRWLS 412 (501)
T ss_pred cCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHHHHHHc
Confidence 888753 22344567777654211 111223467889999999533446788999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
.+|+||||||||+|||+.++..++++|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 413 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 484 (501)
T PRK11288 413 EDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIA-GELAREQAT 484 (501)
T ss_pred cCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEE-EEEccccCC
Confidence 999999999999999999999999998654 679999999999999999999999999997 467666554
No 21
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.1e-78 Score=671.44 Aligned_cols=450 Identities=22% Similarity=0.274 Sum_probs=326.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||||+|+|+++|++|++.+.+. .+......
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~--~~~~~~~~------- 73 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFS--HITRLSFE------- 73 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCc--ccccCCHH-------
Confidence 599999999999888999999999999999999999999999999999999999999876431 11100000
Q ss_pred chHHHHHHHHHHHHHh--ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLV--ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
..+..+....+... ....... .....+.+.+. . .....+++.++++.+|+. +..++++.+|||||||||+||
T Consensus 74 --~~~~~i~~~~q~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 74 --QLQKLVSDEWQRNNTDMLSPGED-DTGRTTAEIIQ-D-EVKDPARCEQLAQQFGIT-ALLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred --HHHHHhceeccCcchhhcccchh-hccccHHHhcc-c-chhHHHHHHHHHHHcCCH-hhhhCCcccCCHHHHHHHHHH
Confidence 00011111111000 0000000 00011111111 0 112346788999999996 567999999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTR 321 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~ 321 (629)
|||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..+ +.+.+....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~-~~~~~~~~~ 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETG-EREEILQQA 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeC-CHHHHhcch
Confidence 9999999999999999999999999999998776 679999999999999999999999999998764 433321100
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeEE
Q psy10512 322 LELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIM 401 (629)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 401 (629)
.. .+.... +.+.. . ..+..... . .+.......++|+
T Consensus 227 ----------------~~-------~~~~~~---------------~~~~~--~-~~~~~~~~-~--~~~~~~~~~~~l~ 262 (490)
T PRK10938 227 ----------------LV-------AQLAHS---------------EQLEG--V-QLPEPDEP-S--ARHALPANEPRIV 262 (490)
T ss_pred ----------------hh-------hhhhhh---------------hccCc--c-ccCccccc-c--cccccCCCCceEE
Confidence 00 000000 00000 0 00000000 0 0000112356899
Q ss_pred EEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-CccEEEECCc------------eeEEe
Q psy10512 402 VQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-SVGMVRKNSH------------LRFAR 468 (629)
Q Consensus 402 ~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-~~G~i~~~~~------------~~~~~ 468 (629)
++|+++.|++ . .+|+++||+|.+||+++|+||||||||||+++|+|+.+| ++|+|.+++. ..++|
T Consensus 263 ~~~l~~~~~~-~-~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 340 (490)
T PRK10938 263 LNNGVVSYND-R-PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGY 340 (490)
T ss_pred EeceEEEECC-e-eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceE
Confidence 9999999963 3 489999999999999999999999999999999998876 6999998752 23788
Q ss_pred eccchhcccCCCCCHHHHHhhc------C-C--ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQS------F-P--EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~------~-~--~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|..........++.+++... . . .....+.+.++++.+|+.....++++.+|||||||||+|||||+.+|
T Consensus 341 v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p 420 (490)
T PRK10938 341 VSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHP 420 (490)
T ss_pred ECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCC
Confidence 8886532222233444443211 0 0 11224567899999999752345688999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---C-ceEEEEecCHHHHHh-hcCEEEEEeCCEEEEe
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---E-GGLVLVSHDFRLINQ-VAEEIWICENGKVTKW 598 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~-~~vi~vsHd~~~~~~-~~d~i~~l~~G~i~~~ 598 (629)
+||||||||+|||+.++..+.+.|.++ + .|||+||||++++.. +||++++|++|+|+.+
T Consensus 421 ~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~ 484 (490)
T PRK10938 421 TLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRY 484 (490)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEe
Confidence 999999999999999999999999876 2 369999999999987 6999999999998764
No 22
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-77 Score=666.29 Aligned_cols=445 Identities=19% Similarity=0.231 Sum_probs=323.2
Q ss_pred EEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchH
Q psy10512 90 IANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDE 169 (629)
Q Consensus 90 i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~ 169 (629)
++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +....... .
T Consensus 1 ~~nl~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~~~~--------~ 70 (491)
T PRK10982 1 MSNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKE--IDFKSSKE--------A 70 (491)
T ss_pred CCceEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEE--CCCCCHHH--------H
Confidence 3689999999899999999999999999999999999999999999999999998875432 11110000 0
Q ss_pred HHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc--cChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 170 ERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD--ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
.+..+..+.++...+...+..+++......... .......+++.++++.+|+. ...++++.+|||||||||+|||||
T Consensus 71 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGq~qrv~lA~al 149 (491)
T PRK10982 71 LENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-IDPRAKVATLSVSQMQMIEIAKAF 149 (491)
T ss_pred HhCCEEEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-CCccCchhhCCHHHHHHHHHHHHH
Confidence 000000011111111111222222110000111 12223345788999999996 457889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHHHHH
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLEL 324 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~~~~ 324 (629)
+.+|+||||||||++||+.++.++++.|+++ +.|||+||||++++..+||+|++|++|+++..+.+.+. ...
T Consensus 150 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~-~~~---- 224 (491)
T PRK10982 150 SYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGL-TMD---- 224 (491)
T ss_pred HhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhC-CHH----
Confidence 9999999999999999999999999988664 68999999999999999999999999999876543221 000
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC-CCCCCCCeEEEE
Q psy10512 325 LENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS-CGKIPPPVIMVQ 403 (629)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 403 (629)
... +.+....... .++. .....+++|+++
T Consensus 225 -------------------~~~---------------------~~~~~~~~~~----------~~~~~~~~~~~~~i~~~ 254 (491)
T PRK10982 225 -------------------KII---------------------AMMVGRSLTQ----------RFPDKENKPGEVILEVR 254 (491)
T ss_pred -------------------HHH---------------------HHHhCCCccc----------ccccccCCCCCcEEEEe
Confidence 000 0000000000 0000 001134689999
Q ss_pred EEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------------eEEeecc
Q psy10512 404 NVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------------RFARYHQ 471 (629)
Q Consensus 404 ~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------------~~~~~~q 471 (629)
|+++.| .. +|+++||+|++||++||+||||||||||+++|+|+++|++|+|.+++.. .++|++|
T Consensus 255 ~l~~~~---~~-~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q 330 (491)
T PRK10982 255 NLTSLR---QP-SIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTE 330 (491)
T ss_pred Cccccc---Cc-ccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCC
Confidence 999975 23 8999999999999999999999999999999999999999999997631 2678877
Q ss_pred chh-cccCCCCCHHHH-----Hhhc---C---CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 472 HLH-ELLDLDISPLDY-----MLQS---F---PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 472 ~~~-~~~~~~~~~~~~-----~~~~---~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
... ..+....++.++ +... + ......+.+.++++.+++.....++++.+|||||||||+||||++.+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p 410 (491)
T PRK10982 331 ERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQP 410 (491)
T ss_pred chhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccccCCcHHHHHHHHHHHHhcCC
Confidence 642 112223333222 2110 0 111234567889999999633346788999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+||||||||+|||+.+++.+++.|.++ +.|||+||||++++..+||++++|++|+++.+ ++...|
T Consensus 411 ~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~-~~~~~~ 478 (491)
T PRK10982 411 EILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGI-VDTKTT 478 (491)
T ss_pred CEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEE-EccccC
Confidence 999999999999999999999888554 67999999999999999999999999999743 333333
No 23
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.1e-74 Score=580.94 Aligned_cols=460 Identities=21% Similarity=0.318 Sum_probs=347.8
Q ss_pred eEEEEeEEEEeC----CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC---CCCceEEEeecccCCCCCcc
Q psy10512 87 DVKIANFSITFH----GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP---VPDHIDIFHLTREMPASDKS 159 (629)
Q Consensus 87 ~i~i~nls~~y~----~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p---~~g~i~i~~~~~~~~~~~~~ 159 (629)
.+.++||++.|+ ...++++|||+|++||.++|||+||||||-..+.|.++++. ..++..+.+.+.++......
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 599999999996 57799999999999999999999999999999999998743 11223333333333221111
Q ss_pred hhhhhhhchHHHHHHHHHHHHHh-ccCCh-hHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc--hhhhcccCCCCh
Q psy10512 160 ALTCVMEVDEERVRLEKLAEQLV-ACEDD-ESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK--EMQQKKTKDFSG 235 (629)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~~~~~~~~LSG 235 (629)
.+..+.. ..+.+++++.. ...+. +...++.+....-..+....+++++.++|+.+|+.. ...+.++++|||
T Consensus 86 ~lr~iRG-----~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSG 160 (534)
T COG4172 86 QLRGVRG-----NKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYPHELSG 160 (534)
T ss_pred HHhhhcc-----cceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCc
Confidence 1100000 00111111110 01111 112233333333345667788899999999999973 356789999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||||||.||.||+.+|++||.||||++||..-+..+.++|+++ +..+++||||+..+..++|||++|.+|++++.+
T Consensus 161 GqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~ 240 (534)
T COG4172 161 GQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVETG 240 (534)
T ss_pred chhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeecC
Confidence 9999999999999999999999999999999999999888654 789999999999999999999999999999876
Q ss_pred CcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccC
Q psy10512 312 GNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPS 391 (629)
Q Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (629)
.....|.. .++.|.. ++.. .++ ...+ +.
T Consensus 241 ~t~~lF~~--------PqHpYTr----------------------------------~Ll~---aeP--~g~~-----~p 268 (534)
T COG4172 241 TTETLFAA--------PQHPYTR----------------------------------KLLA---AEP--SGDP-----PP 268 (534)
T ss_pred cHHHHhhC--------CCChHHH----------------------------------HHHh---cCC--CCCC-----CC
Confidence 54333321 1111110 0111 010 1100 11
Q ss_pred CCCCCCCeEEEEEEEEEEcCCC---------CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECC
Q psy10512 392 CGKIPPPVIMVQNVSFRYSDDG---------PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNS 462 (629)
Q Consensus 392 ~~~~~~~~l~~~~l~~~y~~~~---------~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~ 462 (629)
.+...+++|+.++|.+.|+-.+ ..+++++||++.+|+.+||||.+|||||||-.+|.+++++. |.|++.|
T Consensus 269 ~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G 347 (534)
T COG4172 269 LPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDG 347 (534)
T ss_pred CCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECC
Confidence 2233567899999999995321 23789999999999999999999999999999999999987 9999987
Q ss_pred c--------------eeEEeeccchhcccCCCCCHHHHHhhcC-------CChhhHHHHHHHHHHcCCCCcccccCcCcC
Q psy10512 463 H--------------LRFARYHQHLHELLDLDISPLDYMLQSF-------PEVKDREEMRKIIGRYGLTGRQQVCPIRQL 521 (629)
Q Consensus 463 ~--------------~~~~~~~q~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~L 521 (629)
. .++..++|++...+++.+++.+.+..+. ......+++.++|..+||+.....++++++
T Consensus 348 ~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEF 427 (534)
T COG4172 348 QDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRNRYPHEF 427 (534)
T ss_pred ccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCCccc
Confidence 3 2466788988877888888876654332 122345778899999999988777888999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 522 SDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 522 SgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||||||++||||++.+|++++||||||+||..-+.++.++|+++ +-+-++||||+..+..+||+|+||.+|+|++
T Consensus 428 SGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE 507 (534)
T COG4172 428 SGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVE 507 (534)
T ss_pred CcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEee
Confidence 999999999999999999999999999999999999999998776 4589999999999999999999999999986
Q ss_pred ecCCHHHH
Q psy10512 598 WEGNILDY 605 (629)
Q Consensus 598 ~~g~~~~~ 605 (629)
.|+.++.
T Consensus 508 -~G~~~~i 514 (534)
T COG4172 508 -QGPTEAV 514 (534)
T ss_pred -eCCHHHH
Confidence 6765544
No 24
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.1e-73 Score=636.83 Aligned_cols=441 Identities=21% Similarity=0.260 Sum_probs=314.5
Q ss_pred eEEEEeCCe-eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchHH
Q psy10512 92 NFSITFHGC-ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEE 170 (629)
Q Consensus 92 nls~~y~~~-~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 170 (629)
+++++||+. .+|++++ ++++|+++||+||||||||||||+|+|+++|+.|++.... .....+..+...+..
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~-------~~~~~~~~~~G~~l~ 149 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEP-------SWDEVLKRFRGTELQ 149 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCC-------cHHHHHHHhCChHHH
Confidence 489999874 5999999 8999999999999999999999999999999999885210 000000000000000
Q ss_pred H--HHHHHHHHHHhccCChhHHH-H--HHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 171 R--VRLEKLAEQLVACEDDESQE-Q--LMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 171 ~--~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
. ..+......+.......... . ...+.+.+. ......++.++++.+||. ...++++.+|||||+|||+||+
T Consensus 150 ~~~~~~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~---~~~~~~~~~~~l~~l~l~-~~~~~~~~~LSgGe~qrv~ia~ 225 (590)
T PRK13409 150 NYFKKLYNGEIKVVHKPQYVDLIPKVFKGKVRELLK---KVDERGKLDEVVERLGLE-NILDRDISELSGGELQRVAIAA 225 (590)
T ss_pred HHHHHHhccCcceeecccchhhhhhhhcchHHHHHH---hhhHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHH
Confidence 0 00000000000000000000 0 001111111 112345788999999996 5679999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLE 323 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~~~ 323 (629)
||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|+++. |.|..+......
T Consensus 226 al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~-----g~~g~~~~~~~~ 300 (590)
T PRK13409 226 ALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP-----GAYGVVSKPKGV 300 (590)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc-----cccceecchhHH
Confidence 999999999999999999999999999998877 8899999999999999999999997641 112111111100
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCC--CCCCCeEE
Q psy10512 324 LLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCG--KIPPPVIM 401 (629)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 401 (629)
. ..+..+...+.. . +.+.. . .....+.++... ....++|+
T Consensus 301 ~---------------~~i~~~~~~~~~-------~--------e~~~~---~-----~~~~~~~~~~~~~~~~~~~~l~ 342 (590)
T PRK13409 301 R---------------VGINEYLKGYLP-------E--------ENMRI---R-----PEPIEFEERPPRDESERETLVE 342 (590)
T ss_pred H---------------HhHHHHHHhcch-------h--------hhhhc---c-----ccCcceecCCCccccCCceEEE
Confidence 0 001111111100 0 00000 0 000112221111 12457899
Q ss_pred EEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCCCC
Q psy10512 402 VQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDI 481 (629)
Q Consensus 402 ~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~ 481 (629)
++|+++.|++ . .|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++ ..++|++|+.. .....
T Consensus 343 ~~~ls~~~~~--~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~--~~i~y~~Q~~~--~~~~~ 415 (590)
T PRK13409 343 YPDLTKKLGD--F-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE--LKISYKPQYIK--PDYDG 415 (590)
T ss_pred EcceEEEECC--E-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe--eeEEEeccccc--CCCCC
Confidence 9999999953 3 5999999999999999999999999999999999999999999886 57899999864 34567
Q ss_pred CHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH
Q psy10512 482 SPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALAD 561 (629)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~ 561 (629)
|+.+++............+.++|+.+||.. ..++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.+
T Consensus 416 tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~-~~~~~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~ 494 (590)
T PRK13409 416 TVEDLLRSITDDLGSSYYKSEIIKPLQLER-LLDKNVKDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAK 494 (590)
T ss_pred cHHHHHHHHhhhcChHHHHHHHHHHCCCHH-HHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH
Confidence 888876532111112335678999999975 4567889999999999999999999999999999999999999999999
Q ss_pred HHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 562 AINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 562 ~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
.|+++ +.|||+||||++++..+|||+++|++ ++.
T Consensus 495 ~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~ 532 (590)
T PRK13409 495 AIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPG 532 (590)
T ss_pred HHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cce
Confidence 99876 57899999999999999999999965 664
No 25
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-70 Score=582.45 Aligned_cols=440 Identities=24% Similarity=0.326 Sum_probs=345.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.++++|++|+||+.++|+||||+|.+||++||+|.||||||||+|+|+|.++|++|+|.+.+..... .+..
T Consensus 8 ll~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~--~sp~------- 78 (500)
T COG1129 8 LLELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAF--SSPR------- 78 (500)
T ss_pred eeeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccC--CCHH-------
Confidence 5899999999999999999999999999999999999999999999999999999999886443221 1110
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh--h-hhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD--R-LDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
+.....+..+.|++..+++.+..+|+..... + +..++......++.++|..+|+..+ .+.++.+||+||||.|+|
T Consensus 79 -~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-~~~~v~~LsiaqrQ~VeI 156 (500)
T COG1129 79 -DALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-PDTLVGDLSIAQRQMVEI 156 (500)
T ss_pred -HHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-hhhhhhhCCHHHHHHHHH
Confidence 0111112223345555555555555432111 1 2335667788899999999999644 788999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
||||..+++||||||||++|+......|++.++++ |.+||+|||.++++.++||||.+|++|+++.....-..+
T Consensus 157 ArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~--- 233 (500)
T COG1129 157 ARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAET--- 233 (500)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCC---
Confidence 99999999999999999999999999999877654 789999999999999999999999999988643210111
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEecc--CCCCCCCC
Q psy10512 321 RLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFP--SCGKIPPP 398 (629)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 398 (629)
+.......|....+... || ......++
T Consensus 234 -----------------------------------------~~~~lv~~MvGr~~~~~----------~~~~~~~~~~~~ 262 (500)
T COG1129 234 -----------------------------------------SEDELVRLMVGRELEDL----------FPEPPEEGIGEP 262 (500)
T ss_pred -----------------------------------------CHHHHHHHhhCcchhhh----------cccccccCCCCc
Confidence 01112223333211111 11 11123467
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~ 466 (629)
++++++++..- .++|+||++.+|||+||.|-=|||+|-|+++|.|..++.+|+|.++|. ..+
T Consensus 263 ~l~v~~l~~~~------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi 336 (500)
T COG1129 263 VLEVRNLSGGG------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGI 336 (500)
T ss_pred EEEEecCCCCC------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCC
Confidence 89999998531 489999999999999999999999999999999999999999999884 247
Q ss_pred Eeeccchh-cccCCCCCHHHHHhh----c------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 467 ARYHQHLH-ELLDLDISPLDYMLQ----S------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 467 ~~~~q~~~-~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
+|++.+.. ..+....++.+++.. . .......+.+.++...+++.......++.+||||+||||.|||+|
T Consensus 337 ~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKVvlarwL 416 (500)
T COG1129 337 AYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKVVLARWL 416 (500)
T ss_pred EeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhHHHHHHH
Confidence 78776533 334455555554321 1 122234566788999999987777789999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
+.+|++|||||||.|.|..++.+++++|+++ +.+||+||.|+.++..+||||+||++|+++.
T Consensus 417 ~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~ 481 (500)
T COG1129 417 ATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVG 481 (500)
T ss_pred hcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999877 5689999999999999999999999999975
No 26
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.5e-66 Score=542.67 Aligned_cols=446 Identities=22% Similarity=0.294 Sum_probs=352.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.+++++++|.|++..+++||||+|.+||++||+|+||||||||+++|.|++.|++|+|.+.+....+...
T Consensus 4 ~l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP---------- 73 (501)
T COG3845 4 ALEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSP---------- 73 (501)
T ss_pred eEEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCH----------
Confidence 4899999999999999999999999999999999999999999999999999999999987654443221
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh--hhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD--RLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
.+..+..+.++.|++...+..+..+|+..-.+ ....++.....+++.++.+.+||+-+ .++++.+||-|+||||.|-
T Consensus 74 ~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vd-p~~~V~dLsVG~qQRVEIl 152 (501)
T COG3845 74 RDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVD-PDAKVADLSVGEQQRVEIL 152 (501)
T ss_pred HHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCC-ccceeecCCcchhHHHHHH
Confidence 11223334445555555555555555543322 12234566788899999999999754 6889999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTR 321 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~ 321 (629)
+||+.+|++|||||||+.|-|...+.|++.|+++ |+|||+|||.++++.++|||+.+|+.|+++....+..+.
T Consensus 153 KaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~~~~~---- 228 (501)
T COG3845 153 KALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDPVAET---- 228 (501)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecCCCCC----
Confidence 9999999999999999999999999999988765 799999999999999999999999999987432210000
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeEE
Q psy10512 322 LELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIM 401 (629)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 401 (629)
+.....+.|+...+..+.. .+ +...+.++|+
T Consensus 229 ----------------------------------------t~~ela~lMvG~~v~~~~~--------~~-~~~pg~~vL~ 259 (501)
T COG3845 229 ----------------------------------------TEEELAELMVGREVVLRVV--------KP-PSTPGEVVLE 259 (501)
T ss_pred ----------------------------------------CHHHHHHHhcCCccccccc--------cC-CCCCCCeEEE
Confidence 0111223344422211111 11 1223478999
Q ss_pred EEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-------------eEEe
Q psy10512 402 VQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-------------RFAR 468 (629)
Q Consensus 402 ~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-------------~~~~ 468 (629)
+++|+..-..+ ...++++||+|..|||+||.|-.|.|.+.|+.+|+|+.+|.+|+|.++|.. .++|
T Consensus 260 V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~ 338 (501)
T COG3845 260 VEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAY 338 (501)
T ss_pred EeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCcc
Confidence 99999875432 347999999999999999999999999999999999999999999998753 3567
Q ss_pred eccch-hcccCCCCCHHHHHhhcCC------------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 469 YHQHL-HELLDLDISPLDYMLQSFP------------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 469 ~~q~~-~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
++.+. ...+.+++++.+++..... .......+.++++.|++.......|+.+||||++||+.+||-|
T Consensus 339 VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~~a~~LSGGNqQK~IlaREl 418 (501)
T COG3845 339 VPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDAPARSLSGGNQQKLILAREL 418 (501)
T ss_pred CChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCcchhhcCCcceehhhhhhhh
Confidence 76553 3345566777776532211 0123456788999999976666678999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
..+|++||+.+||.|||..+.+.+.+.|.+. +.+|++||-|++++..+||||+||.+|+++.
T Consensus 419 ~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~ 483 (501)
T COG3845 419 ARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVG 483 (501)
T ss_pred ccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceec
Confidence 9999999999999999999999999988665 5689999999999999999999999999974
No 27
>KOG0055|consensus
Probab=100.00 E-value=7.8e-64 Score=572.87 Aligned_cols=203 Identities=27% Similarity=0.332 Sum_probs=169.5
Q ss_pred eEEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeE
Q psy10512 399 VIMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~ 466 (629)
-|+++||+|.||.. ..+||+|+||+|++|+.+|||||+||||||.+.+|-.++.|++|.|.+++. ..+
T Consensus 987 ~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i 1066 (1228)
T KOG0055|consen 987 DIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQI 1066 (1228)
T ss_pred EEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhc
Confidence 38999999999742 124899999999999999999999999999999999999999999999873 357
Q ss_pred EeeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCc-------cc---ccCcCcCChhHHHHHHHHHHHc
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGR-------QQ---VCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~---~~~~~~LSgGqkqrv~lAral~ 536 (629)
+.+.|.+. -++.|..+++..+... ...+++.++++..+..+. .. -.+-.+||||||||+|||||++
T Consensus 1067 ~lVsQEP~---LF~~TIrENI~YG~~~-vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAil 1142 (1228)
T KOG0055|consen 1067 GLVSQEPV---LFNGTIRENIAYGSEE-VSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAIL 1142 (1228)
T ss_pred ceeccCch---hhcccHHHHHhccCCC-CCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHH
Confidence 78888764 3567899998877433 456666666665443211 11 1133589999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
++|+||||||.||+||.++...+.++|.+. +.|.|+|.|.+..+.+ ||.|+|+++|+|++ .|+.+++..
T Consensus 1143 RnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~VvE-~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1143 RNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN-ADVIAVLKNGKVVE-QGTHDELLA 1213 (1228)
T ss_pred cCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc-CCEEEEEECCEEEe-cccHHHHHh
Confidence 999999999999999999999999999886 5789999999999965 99999999999985 799888755
No 28
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.1e-60 Score=581.32 Aligned_cols=208 Identities=22% Similarity=0.261 Sum_probs=176.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFA 467 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~ 467 (629)
.+|+++||++.|++....+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|. ..+|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IG 2015 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMG 2015 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEE
Confidence 378999999999643245999999999999999999999999999999999999999999998873 2488
Q ss_pred eeccchhcccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|... +...+|+.+++.. +.+....++.+.++|+.+||... .++++++|||||||||+||+||+.+|+||
T Consensus 2016 y~pQ~~~--L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~-~dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2016 YCPQFDA--IDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLY-ADRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred EEecccc--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-hcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9998743 4456788877532 12222234567789999999764 45678999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETL 609 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 609 (629)
||||||+|||+.+++.+++.|.++ +.|||++||++++++.+||||++|++|+++ ..|++++++...
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~-~~Gs~q~Lk~~~ 2161 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQ-CLGTIQHLKSKF 2161 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHHHh
Confidence 999999999999999999998775 468999999999999999999999999997 578888776543
No 29
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.3e-60 Score=577.72 Aligned_cols=204 Identities=24% Similarity=0.343 Sum_probs=170.8
Q ss_pred eEEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC------------------------
Q psy10512 399 VIMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP------------------------ 453 (629)
Q Consensus 399 ~l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p------------------------ 453 (629)
-|+++||+|+|+.. ..++|+|+||+|++|+++|||||||||||||+++|+|++.|
T Consensus 1165 ~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~ 1244 (1466)
T PTZ00265 1165 KIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQG 1244 (1466)
T ss_pred eEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence 49999999999632 23489999999999999999999999999999999999999
Q ss_pred ------------------------------CccEEEECCc-----------eeEEeeccchhcccCCCCCHHHHHhhcCC
Q psy10512 454 ------------------------------SVGMVRKNSH-----------LRFARYHQHLHELLDLDISPLDYMLQSFP 492 (629)
Q Consensus 454 ------------------------------~~G~i~~~~~-----------~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 492 (629)
++|+|.++|. ..++|++|++. -++.|+.+++..+.+
T Consensus 1245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~---LF~gTIreNI~~g~~ 1321 (1466)
T PTZ00265 1245 DEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPM---LFNMSIYENIKFGKE 1321 (1466)
T ss_pred ccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCc---cccccHHHHHhcCCC
Confidence 6999999873 35899999863 356789999877654
Q ss_pred ChhhHHHHHHHHHHcCCCCccc------cc----CcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHH
Q psy10512 493 EVKDREEMRKIIGRYGLTGRQQ------VC----PIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADA 562 (629)
Q Consensus 493 ~~~~~~~~~~~l~~~gl~~~~~------~~----~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~ 562 (629)
. ...+++.++++..++.+... +. ....||||||||++|||||+++|+||||||||++||.++.+.+.+.
T Consensus 1322 ~-at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1322 D-ATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred C-CCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 3 35567777877776643221 11 2347999999999999999999999999999999999999999999
Q ss_pred Hhhc----CceEEEEecCHHHHHhhcCEEEEEeC----CEEEEecCCHHHHHH
Q psy10512 563 INDF----EGGLVLVSHDFRLINQVAEEIWICEN----GKVTKWEGNILDYKE 607 (629)
Q Consensus 563 l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~----G~i~~~~g~~~~~~~ 607 (629)
|.+. +.|+|+|||++..+. .||+|++|++ |+++...|+++++.+
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~-~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIK-RSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHH-hCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9886 469999999999985 5999999999 897656799887753
No 30
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.2e-59 Score=572.26 Aligned_cols=202 Identities=19% Similarity=0.242 Sum_probs=169.8
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
.|+++||+|+|+++.+++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|.++|. .+++
T Consensus 1237 ~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~Is 1316 (1622)
T PLN03130 1237 SIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLG 1316 (1622)
T ss_pred cEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccE
Confidence 59999999999655445999999999999999999999999999999999999999999999873 3688
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccc----------cCcCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQV----------CPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~~LSgGqkqrv~lAral~~ 537 (629)
+++|++. -++-|+.+++.... ...++++.++++..++.+.... .....||||||||++|||||++
T Consensus 1317 iVpQdp~---LF~GTIreNLd~~~--~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr 1391 (1622)
T PLN03130 1317 IIPQAPV---LFSGTVRFNLDPFN--EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLR 1391 (1622)
T ss_pred EECCCCc---cccccHHHHhCcCC--CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHc
Confidence 9999864 23458888875332 2356678888887766432211 1234799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|+||||||||++||.++...+.+.|++. +.|+|+|+|+++.+.. ||+|+||++|+|++ .|+++++.+
T Consensus 1392 ~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE-~Gt~~eLl~ 1461 (1622)
T PLN03130 1392 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILVLDAGRVVE-FDTPENLLS 1461 (1622)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh-CCEEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999999999999999875 5799999999999976 89999999999986 577776643
No 31
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.5e-59 Score=570.13 Aligned_cols=202 Identities=18% Similarity=0.245 Sum_probs=169.9
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
.|+++||+|+|+++.+++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|.++|. ..++
T Consensus 1234 ~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1313 (1495)
T PLN03232 1234 SIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLS 1313 (1495)
T ss_pred cEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcE
Confidence 59999999999655445999999999999999999999999999999999999999999999873 3588
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccc----------cCcCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQV----------CPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~~LSgGqkqrv~lAral~~ 537 (629)
+++|++. + ++-|+.+++... . ...++++.++++..++.+.... .....||||||||++|||||++
T Consensus 1314 iVpQdp~--L-F~gTIr~NL~~~-~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr 1388 (1495)
T PLN03232 1314 IIPQSPV--L-FSGTVRFNIDPF-S-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLR 1388 (1495)
T ss_pred EECCCCe--e-eCccHHHHcCCC-C-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHh
Confidence 9999864 2 345888887532 2 2355678888888776432211 1234799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|+||||||||++||.++...+.+.|++. +.|+|+|+|+++.+.. ||+|++|++|+|++ .|+++++.+
T Consensus 1389 ~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE-~Gt~~eLl~ 1458 (1495)
T PLN03232 1389 RSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIID-CDKILVLSSGQVLE-YDSPQELLS 1458 (1495)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHh-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 99999999999999999999999999876 5799999999999976 99999999999986 588877643
No 32
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4e-58 Score=564.97 Aligned_cols=202 Identities=20% Similarity=0.236 Sum_probs=169.3
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
-|+++||+|+|+++.+++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|.++|. .+++
T Consensus 1284 ~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~ 1363 (1522)
T TIGR00957 1284 RVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKIT 1363 (1522)
T ss_pred cEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCe
Confidence 59999999999754445999999999999999999999999999999999999999999999873 3688
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCccc------ccC----cCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQ------VCP----IRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~------~~~----~~~LSgGqkqrv~lAral~~ 537 (629)
+++|++. -++-|+.+++.. +.. ..++++.++++..++.+... +.. ...||||||||++|||||++
T Consensus 1364 iVpQdp~---LF~gTIr~NLdp-~~~-~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr 1438 (1522)
T TIGR00957 1364 IIPQDPV---LFSGSLRMNLDP-FSQ-YSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLR 1438 (1522)
T ss_pred EECCCCc---ccCccHHHHcCc-ccC-CCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHc
Confidence 9999864 234588888742 222 35567788888877643211 112 24699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|+||||||||++||.++...+.+.|++. +.|||+|+|+++.+.. ||+|+||++|+|++ .|++++..+
T Consensus 1439 ~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~-~DrIlVld~G~IvE-~G~~~eLl~ 1508 (1522)
T TIGR00957 1439 KTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMD-YTRVIVLDKGEVAE-FGAPSNLLQ 1508 (1522)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 99999999999999999999999999875 5699999999999976 89999999999986 688877654
No 33
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=7.9e-57 Score=552.28 Aligned_cols=202 Identities=21% Similarity=0.285 Sum_probs=171.0
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
-|+++||+|+|+++.+++|+||||+|++||++||||++|||||||+++|.|+++|++|+|.++|. ..++
T Consensus 1308 ~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~ 1387 (1560)
T PTZ00243 1308 SLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFS 1387 (1560)
T ss_pred eEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcce
Confidence 49999999999765556999999999999999999999999999999999999999999999873 3588
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccc------c----CcCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQV------C----PIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~------~----~~~~LSgGqkqrv~lAral~~ 537 (629)
+++|++. -++-|+.+++.. +. ....+++.++++..|+.+.... . ....||||||||++|||||++
T Consensus 1388 iVpQdp~---LF~gTIreNIdp-~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~ 1462 (1560)
T PTZ00243 1388 MIPQDPV---LFDGTVRQNVDP-FL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLK 1462 (1560)
T ss_pred EECCCCc---cccccHHHHhCc-cc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhc
Confidence 9999863 235588888743 22 2456778899998887543211 1 225799999999999999999
Q ss_pred C-CCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 A-PHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~-p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+ |+||||||||++||.++...+.+.|.+. +.|||+|+|+++.+.. ||+|++|++|+|++ .|+++++.+
T Consensus 1463 ~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE-~Gt~~eLl~ 1533 (1560)
T PTZ00243 1463 KGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQ-YDKIIVMDHGAVAE-MGSPRELVM 1533 (1560)
T ss_pred CCCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHh-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 5 8999999999999999999999999875 5799999999999965 89999999999985 688877753
No 34
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.1e-55 Score=537.81 Aligned_cols=200 Identities=23% Similarity=0.346 Sum_probs=168.4
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
-|+++||+++|+++.+++|+|+||+|++||++||||++|||||||+++|+|+++ ++|+|.++|. ..++
T Consensus 1217 ~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is 1295 (1490)
T TIGR01271 1217 QMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFG 1295 (1490)
T ss_pred eEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceE
Confidence 599999999997654569999999999999999999999999999999999997 7999999873 3688
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCccccc------Cc----CcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVC------PI----RQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~------~~----~~LSgGqkqrv~lAral~~ 537 (629)
+++|++. -+.-|+.+++.. +. ...++++.++|+.+++.+..... ++ ..||||||||++|||||++
T Consensus 1296 ~IpQdp~---LF~GTIR~NLdp-~~-~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr 1370 (1490)
T TIGR01271 1296 VIPQKVF---IFSGTFRKNLDP-YE-QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILS 1370 (1490)
T ss_pred EEeCCCc---cCccCHHHHhCc-cc-CCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhC
Confidence 9999864 234588888742 21 23567888999988875332211 22 3699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|+||||||||++||.++...+.+.|++. +.|||+|||+++.+.. ||+|++|++|+|++ .|++.++.
T Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE-~g~p~~Ll 1439 (1490)
T TIGR01271 1371 KAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE-CQQFLVIEGSSVKQ-YDSIQKLL 1439 (1490)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh-CCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999875 4799999999999975 99999999999986 57776664
No 35
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2e-55 Score=535.42 Aligned_cols=200 Identities=20% Similarity=0.251 Sum_probs=164.3
Q ss_pred eEEEEEEEEEEc--CCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC---CCccEEEECCce-------eE
Q psy10512 399 VIMVQNVSFRYS--DDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT---PSVGMVRKNSHL-------RF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~--~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~---p~~G~i~~~~~~-------~~ 466 (629)
+|+++||++.|+ ++...+|+|||++|++|++++|+|||||||||||++|+|+.+ |++|+|.++|.. .+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~i 838 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRSI 838 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcce
Confidence 478999999995 223459999999999999999999999999999999999998 788999998742 47
Q ss_pred EeeccchhcccCCCCCHHHHHhhc----CCC----hhhHHHHHHHHHHcCCCCcccccCcC----cCChhHHHHHHHHHH
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS----FPE----VKDREEMRKIIGRYGLTGRQQVCPIR----QLSDGQKCRVVFAYL 534 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~----~LSgGqkqrv~lAra 534 (629)
+|++|+.. +....|+.+++... .+. ....+.+.++++.+|+.+.. +..++ .|||||||||+||++
T Consensus 839 ~yv~Q~~~--~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-d~~v~~~~~~LSgGqrqRl~Ia~a 915 (1394)
T TIGR00956 839 GYVQQQDL--HLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYA-DAVVGVPGEGLNVEQRKRLTIGVE 915 (1394)
T ss_pred eeeccccc--CCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhC-CCeeCCCCCCCCHHHhhHHHHHHH
Confidence 89988742 34567888876421 111 12235678999999997543 44555 799999999999999
Q ss_pred HccCCC-EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHH-HHhhcCEEEEEeCC-EEEEecCCH
Q psy10512 535 AWQAPH-LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRL-INQVAEEIWICENG-KVTKWEGNI 602 (629)
Q Consensus 535 l~~~p~-lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~-~~~~~d~i~~l~~G-~i~~~~g~~ 602 (629)
|+.+|+ ||||||||+|||..+...+.+.|+++ +.|||++|||++. +...||++++|++| +++ +.|+.
T Consensus 916 L~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv-~~G~~ 988 (1394)
T TIGR00956 916 LVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTV-YFGDL 988 (1394)
T ss_pred HHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEE-EECCc
Confidence 999997 99999999999999999999999876 4689999999986 45779999999987 986 45654
No 36
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.6e-53 Score=515.20 Aligned_cols=200 Identities=20% Similarity=0.264 Sum_probs=162.7
Q ss_pred eEEEEEEEEEEcC-----------CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC--CccEEEECCc--
Q psy10512 399 VIMVQNVSFRYSD-----------DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP--SVGMVRKNSH-- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~-----------~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 463 (629)
.+.++||++..+. +...+|+|+|+.|++|++++|+|||||||||||++|+|..++ .+|+|.++|.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5889999988731 123589999999999999999999999999999999999874 7899998873
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhhc----CCC----hhhHHHHHHHHHHcCCCCcccccCc-----CcCChh
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQS----FPE----VKDREEMRKIIGRYGLTGRQQVCPI-----RQLSDG 524 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~l~~~gl~~~~~~~~~-----~~LSgG 524 (629)
..++|++|... +....|+.+++... .+. ....+.+.++++.+||.+.. +..+ ..||||
T Consensus 947 ~~~~~~~~igyv~Q~d~--~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~-~~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 947 KQETFARISGYCEQNDI--HSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLK-DAIVGLPGVTGLSTE 1023 (1470)
T ss_pred ChHHhhhheEEEccccc--cCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHh-CCccCCCCCCCcCHH
Confidence 23789998742 44567888876421 121 11234578899999997543 3343 589999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHH-HHHhhcCEEEEEeC-CEEEEec
Q psy10512 525 QKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFR-LINQVAEEIWICEN-GKVTKWE 599 (629)
Q Consensus 525 qkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~ 599 (629)
|||||+||++|+.+|+||||||||+|||+.+...+++.|+++ +.|||++||+++ .+..+||++++|++ |+++ +.
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v-~~ 1102 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YS 1102 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEE-EE
Confidence 999999999999999999999999999999999999999876 569999999998 47789999999996 8986 56
Q ss_pred CCH
Q psy10512 600 GNI 602 (629)
Q Consensus 600 g~~ 602 (629)
|+.
T Consensus 1103 G~~ 1105 (1470)
T PLN03140 1103 GPL 1105 (1470)
T ss_pred CCc
Confidence 653
No 37
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-54 Score=408.23 Aligned_cols=227 Identities=26% Similarity=0.346 Sum_probs=197.9
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+|+||+..+|+||||+|.+||+++||||||||||||||||++++.|++|+|.+.+....... +
T Consensus 2 mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~----------~ 71 (240)
T COG1126 2 MIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKK----------D 71 (240)
T ss_pred eEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchh----------h
Confidence 599999999999999999999999999999999999999999999999999999999988653211100 2
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
....|..++.++|++..++..+..+++..........+.+++++++.++|+.+||. +..+.+|.+||||||||||||||
T Consensus 72 ~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~-~ka~~yP~qLSGGQqQRVAIARA 150 (240)
T COG1126 72 ILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLA-DKADAYPAQLSGGQQQRVAIARA 150 (240)
T ss_pred HHHHHHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCch-hhhhhCccccCcHHHHHHHHHHH
Confidence 34556677778888888888787887776666667788889999999999999997 67899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLE 323 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~~~ 323 (629)
|+++|+++|+|||||+|||+.+.++.+.++++ |.|+|+|||++.|+..+||||++|++|++++.+.+.+.|..++.+
T Consensus 151 LaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~~ 230 (240)
T COG1126 151 LAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKSE 230 (240)
T ss_pred HcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCCH
Confidence 99999999999999999999999988877654 789999999999999999999999999999998777776655433
Q ss_pred H
Q psy10512 324 L 324 (629)
Q Consensus 324 ~ 324 (629)
+
T Consensus 231 R 231 (240)
T COG1126 231 R 231 (240)
T ss_pred H
Confidence 3
No 38
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.8e-52 Score=428.38 Aligned_cols=435 Identities=20% Similarity=0.304 Sum_probs=287.6
Q ss_pred eEEEEeCCeeeeEeeeEE-EeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchHH
Q psy10512 92 NFSITFHGCELLQDTMLE-LNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEE 170 (629)
Q Consensus 92 nls~~y~~~~~L~~vsl~-i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 170 (629)
++..+||.. -|+=..|- ..+|.++||+||||.||||-+++|+|.+.|.-|... -++.+...+..+..
T Consensus 79 e~vHRYg~N-gFkL~~LP~pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~-------~pp~wdeVi~~FrG---- 146 (591)
T COG1245 79 EVVHRYGVN-GFKLYRLPTPRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYE-------DPPSWDEVIKRFRG---- 146 (591)
T ss_pred cceeeccCC-ceEEecCCCCCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCC-------CCCCHHHHHHHhhh----
Confidence 356677631 12222232 368999999999999999999999999998766431 11111111111110
Q ss_pred HHHHHHHHHHHhc-----cCChhHHHHHHHHHhh-hhcc-ChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 171 RVRLEKLAEQLVA-----CEDDESQEQLMDIYDR-LDDI-SADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 171 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-l~~~-~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
..+...+..+.. ...+.-.+.+..+... ...+ ......-...++.+.++|. ...+|.+++|||||.||++|
T Consensus 147 -tELq~YF~~l~~g~~r~v~K~QYVd~iPk~~KG~v~elLk~~de~g~~devve~l~L~-nvl~r~v~~LSGGELQr~aI 224 (591)
T COG1245 147 -TELQNYFKKLYEGELRAVHKPQYVDLIPKVVKGKVGELLKKVDERGKFDEVVERLGLE-NVLDRDVSELSGGELQRVAI 224 (591)
T ss_pred -hHHHHHHHHHHcCCcceecchHHHHHHHHHhcchHHHHHHhhhhcCcHHHHHHHhcch-hhhhhhhhhcCchHHHHHHH
Confidence 111122222211 0000001111111000 0000 0111123567889999996 67899999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
|.+|+++++++++|||||.||...+...-..++++ +++||+|.||+..++-++|-|.++.. + .|.|..+...
T Consensus 225 aa~l~rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~YG-~----pg~YGvvs~p 299 (591)
T COG1245 225 AAALLRDADVYFFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILYG-E----PGVYGVVSKP 299 (591)
T ss_pred HHHHhccCCEEEEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEec-C----CccceEeccc
Confidence 99999999999999999999999987777766655 57999999999999999998877753 1 1222222221
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCC-CC-CC
Q psy10512 321 RLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGK-IP-PP 398 (629)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 398 (629)
+.- ...+..|+..+ -.. +.+ .....++.|....+.. .. ..
T Consensus 300 ~sv---------------r~gIN~yL~Gy--l~~-------------EN~--------R~R~~~I~F~~~~~~~~~~~~~ 341 (591)
T COG1245 300 KSV---------------RVGINEYLKGY--LPE-------------ENV--------RFRPEEIEFEEKPPRDDKARDT 341 (591)
T ss_pred hHH---------------HHHHHHHHhcc--Cch-------------hcc--------cccccceeeeccCcccccccce
Confidence 110 01112222111 000 000 0112233343332211 11 34
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccC
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLD 478 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 478 (629)
+++..++++.|++ .-|+-=.=+|..||+++++||||-|||||.++|+|.++|++|. ....++.|-+|.... +
T Consensus 342 lv~y~~~~k~~g~---F~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~---~~~~~vSyKPQyI~~--~ 413 (591)
T COG1245 342 LVEYPDLKKTYGD---FKLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS---EEDLKVSYKPQYISP--D 413 (591)
T ss_pred eeecchheeecCc---eEEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC---CccceEeecceeecC--C
Confidence 5566666666642 1233333456677899999999999999999999999999998 556778999998753 4
Q ss_pred CCCCHHHHHhhcCCC-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHH
Q psy10512 479 LDISPLDYMLQSFPE-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETID 557 (629)
Q Consensus 479 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~ 557 (629)
.+.|+.+++....+. ......-.++++-|+|... ..+++..|||||.|||+||.+|.++++|+|||||+++||.+.+-
T Consensus 414 ~~gtV~~~l~~~~~~~~~~s~~~~ei~~pl~l~~i-~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~ 492 (591)
T COG1245 414 YDGTVEDLLRSAIRSAFGSSYFKTEIVKPLNLEDL-LERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRI 492 (591)
T ss_pred CCCcHHHHHHHhhhhhcccchhHHhhcCccchHHH-HhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHH
Confidence 667887776544332 1122234567888888754 45789999999999999999999999999999999999999998
Q ss_pred HHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeC
Q psy10512 558 ALADAINDF----EGGLVLVSHDFRLINQVAEEIWICEN 592 (629)
Q Consensus 558 ~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~ 592 (629)
.+.+.|+++ +.|.++|.||+.++.-++||++|++.
T Consensus 493 ~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 493 IVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred HHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 888888775 56899999999999999999999863
No 39
>KOG0054|consensus
Probab=100.00 E-value=1.7e-50 Score=473.68 Aligned_cols=202 Identities=20% Similarity=0.319 Sum_probs=165.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECC-----------ceeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNS-----------HLRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~-----------~~~~~ 467 (629)
-|+++|++.+|.++.+.||+||||+|++||.|||||..|||||||+.+|..+..|.+|+|.++| +.+++
T Consensus 1138 ~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrls 1217 (1381)
T KOG0054|consen 1138 EIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLS 1217 (1381)
T ss_pred eEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCe
Confidence 5999999999988777899999999999999999999999999999999999999999999987 24677
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCccccc----------CcCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVC----------PIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~ 537 (629)
.++|++.. +.-|+..++- .+.. ..++++.++|+..+|....... -..++|-||||.|||||||++
T Consensus 1218 IIPQdPvL---FsGTvR~NLD-Pf~e-~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr 1292 (1381)
T KOG0054|consen 1218 IIPQDPVL---FSGTVRFNLD-PFDE-YSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLR 1292 (1381)
T ss_pred eeCCCCce---ecCccccccC-cccc-cCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhc
Confidence 88888642 2334433321 1111 3456677777777664322211 225799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+++||+|||+|+++|+++-..+.+.|++. +.|||.|.|.++.+.. ||||+||++|+|++| |+|.++.+
T Consensus 1293 ~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd-~DrVlVld~G~v~Ef-dsP~~Ll~ 1362 (1381)
T KOG0054|consen 1293 KSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEF-DSPAELLS 1362 (1381)
T ss_pred cCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhh-cCeEEEeeCCeEeec-CChHHHHh
Confidence 99999999999999999999999999874 5799999999999987 899999999999976 55555543
No 40
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-50 Score=380.72 Aligned_cols=204 Identities=25% Similarity=0.458 Sum_probs=179.8
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
++|+++||+++|+. ..+|++|||+|.+||+++|+||||||||||||||.|+..|++|+|.++|. .+
T Consensus 1 ~mi~i~~l~K~fg~--~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 1 MMIEIKNLSKSFGD--KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred CeEEEEeeeEEeCC--eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 47999999999964 35899999999999999999999999999999999999999999999883 25
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
+|+++|++. +.+.+|+++++... .+....++.+.++|+++||.+... .++.+|||||||||+|||||+.+|
T Consensus 79 vGmVFQ~fn--LFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~-~yP~qLSGGQqQRVAIARALaM~P 155 (240)
T COG1126 79 VGMVFQQFN--LFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKAD-AYPAQLSGGQQQRVAIARALAMDP 155 (240)
T ss_pred cCeeccccc--ccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhh-hCccccCcHHHHHHHHHHHHcCCC
Confidence 789999864 67788999987532 344456778899999999987655 466999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+++|+|||||+|||+...++++.+.++ +.|+|+|||++.|+..+||||++|++|+|++ +|+++++..
T Consensus 156 ~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie-~g~p~~~f~ 225 (240)
T COG1126 156 KVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIE-EGPPEEFFD 225 (240)
T ss_pred CEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEE-ecCHHHHhc
Confidence 999999999999999999999988776 5699999999999999999999999999975 678777643
No 41
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-48 Score=374.15 Aligned_cols=228 Identities=24% Similarity=0.323 Sum_probs=197.3
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+||.|+++.+++|+||+|++||+++|||||||||||+||+|++++.|++|.|.+++... ... .
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i--~~~---------d 69 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDI--SDL---------D 69 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeec--ccC---------C
Confidence 48999999999999999999999999999999999999999999999999999999999865432 111 1
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc-hhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK-EMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-~~~~~~~~~LSGGqrqRv~LAr 245 (629)
....|..++++.+++..++..+..+++..+ ..+..++..+..+++.++|+.+||++ ++.+|+|++|||||||||.+||
T Consensus 70 ~~~LRr~IGYviQqigLFPh~Tv~eNIa~V-P~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 70 PVELRRKIGYVIQQIGLFPHLTVAENIATV-PKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred HHHHHHhhhhhhhhcccCCCccHHHHHHhh-hhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHH
Confidence 224677888888988888777666665554 45666788888999999999999986 6899999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELK----TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTR 321 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~----~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~ 321 (629)
||+.+|+|||||||+++|||-++..|.+.+. ++++|||+||||++++..++|||++|++|+++.|+.|.+.+.++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 9999999999999999999999998887664 458999999999999999999999999999999998877766655
Q ss_pred HHHHH
Q psy10512 322 LELLE 326 (629)
Q Consensus 322 ~~~~~ 326 (629)
.+..+
T Consensus 229 n~FV~ 233 (309)
T COG1125 229 NDFVE 233 (309)
T ss_pred HHHHH
Confidence 44433
No 42
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-48 Score=383.62 Aligned_cols=227 Identities=26% Similarity=0.403 Sum_probs=190.4
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|++++++|.|+. ..+|+||||+|++||++||||+||||||||+|||++++.|++|++.+.+. ++...+..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~--di~~l~~~-- 76 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQ--DLTALSEA-- 76 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCE--ecccCChH--
Confidence 4899999999986 46999999999999999999999999999999999999999999988653 22221111
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
.....|..++++++++..+...+.. .+..+...+...+..+.++++.++|+.+||+ +..++++.+|||||||||
T Consensus 77 ----~Lr~~R~~IGMIFQhFnLLssrTV~-~NvA~PLeiag~~k~ei~~RV~elLelVgL~-dk~~~yP~qLSGGQKQRV 150 (339)
T COG1135 77 ----ELRQLRQKIGMIFQHFNLLSSRTVF-ENVAFPLELAGVPKAEIKQRVAELLELVGLS-DKADRYPAQLSGGQKQRV 150 (339)
T ss_pred ----HHHHHHhhccEEeccccccccchHH-hhhhhhHhhcCCCHHHHHHHHHHHHHHcCCh-hhhccCchhcCcchhhHH
Confidence 1223455666666666655444433 3344455566677888999999999999997 788999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
+|||||+.+|+|||+|||||+|||++...+.+.|++ +|.||++|||.|+.+.++|||+.+|++|++++.|...+.|
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999998864 4789999999999999999999999999999999988888
Q ss_pred HHHHHH
Q psy10512 318 CKTRLE 323 (629)
Q Consensus 318 ~~~~~~ 323 (629)
..++..
T Consensus 231 ~~Pk~~ 236 (339)
T COG1135 231 ANPKHA 236 (339)
T ss_pred cCcchH
Confidence 766443
No 43
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-47 Score=374.67 Aligned_cols=206 Identities=30% Similarity=0.437 Sum_probs=179.5
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------eeEEe
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------LRFAR 468 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------~~~~~ 468 (629)
.++|+++|+++.|+.. + +|+||||+|++|++++|+||||||||||+|+|+|+++|++|+|.+.+. .++||
T Consensus 2 ~~~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 2 MPMIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred CcEEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 3579999999999643 4 999999999999999999999999999999999999999999998764 47999
Q ss_pred eccchhcccCCCCCHHHHHhhcC---------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSF---------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|.......+..|+.+++..+. +...+.+.+.++|+++|+.+. .++++++|||||+|||.|||||+++|
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~-~~r~i~~LSGGQ~QRV~lARAL~~~p 158 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDL-RDRQIGELSGGQKQRVLLARALAQNP 158 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhh-hCCcccccCcHHHHHHHHHHHhccCC
Confidence 99987656677889999876531 122456889999999999865 46789999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
++|||||||+|+|+.+...++++|.++ +.|||+||||+..+..+||+|+.|+.. +. ..|+++++..
T Consensus 159 ~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~-~~-~~G~~~~~~~ 227 (254)
T COG1121 159 DLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRH-LI-ASGPPEEVLT 227 (254)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCe-eE-eccChhhccC
Confidence 999999999999999999999999876 569999999999999999999999654 43 4688776643
No 44
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.3e-47 Score=378.40 Aligned_cols=216 Identities=27% Similarity=0.372 Sum_probs=171.7
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.++++||+++|+++++|+|+||+|++|++++||||||||||||||+|+|+++|.+|+|.+.+.... ...
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~--~~~--------- 70 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIA--SLS--------- 70 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchh--hcC---------
Confidence 589999999999999999999999999999999999999999999999999999999988643211 000
Q ss_pred chHHHHHHHHHHHHHhc------cCChhHHHHHHHH--Hhhhhcc--ChhhHHHHHHHHHHhCCCCchhhhcccCCCChH
Q psy10512 167 VDEERVRLEKLAEQLVA------CEDDESQEQLMDI--YDRLDDI--SADTAEARAANILHGLGFTKEMQQKKTKDFSGG 236 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~l~~~--~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 236 (629)
.....+.+.+ .+...++.++... +.....+ ...+.++.+.++|+.+|+. ++.+|++.+||||
T Consensus 71 -------~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~-~la~r~~~~LSGG 142 (258)
T COG1120 71 -------PKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLE-HLADRPVDELSGG 142 (258)
T ss_pred -------HHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcH-HHhcCcccccChh
Confidence 0011111111 1111122222211 1111112 2344556799999999996 7899999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||.|||||+++|+|||||||||+||+..+..+++.++++ +.|||+|+||++++.++||++++|++|++++.|.
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~ 222 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGT 222 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecC
Confidence 999999999999999999999999999999999999988765 5899999999999999999999999999999999
Q ss_pred cHHHHHHHH
Q psy10512 313 NYEAFCKTR 321 (629)
Q Consensus 313 ~~~~~~~~~ 321 (629)
+.+.+..+.
T Consensus 223 p~evlT~e~ 231 (258)
T COG1120 223 PEEVLTEEN 231 (258)
T ss_pred cchhcCHHH
Confidence 887776543
No 45
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.3e-46 Score=370.44 Aligned_cols=201 Identities=30% Similarity=0.473 Sum_probs=174.7
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
+|+++||+++|++ ..+++|+||+|++|++++|+||||||||||||+|+|+++|.+|+|.++|. ..++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 6899999999963 45999999999999999999999999999999999999999999999884 3689
Q ss_pred eeccchhcccCCCCCHHHHHhhc-C--------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccC
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQS-F--------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 538 (629)
|++|... ....+++.+.+..+ + +...+.+.+.++|+.+|+.+.. .+++.+|||||||||.|||||+++
T Consensus 80 ~vpQ~~~--~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-~r~~~~LSGGerQrv~iArALaQ~ 156 (258)
T COG1120 80 YVPQSPS--APFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-DRPVDELSGGERQRVLIARALAQE 156 (258)
T ss_pred EeccCCC--CCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-cCcccccChhHHHHHHHHHHHhcC
Confidence 9999863 44566777765432 1 1224556788999999998755 568999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|++|||||||++||+..+.+++++++++ +.|||+|+||++++.++||++++|++|+++. .|++.+.
T Consensus 157 ~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a-~G~p~ev 226 (258)
T COG1120 157 TPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVA-QGTPEEV 226 (258)
T ss_pred CCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEe-ecCcchh
Confidence 9999999999999999999999999876 3689999999999999999999999999985 6776543
No 46
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-46 Score=368.36 Aligned_cols=203 Identities=25% Similarity=0.402 Sum_probs=176.8
Q ss_pred eEEEEEEEEEEcCC---CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 399 VIMVQNVSFRYSDD---GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~---~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
||++++|++.|... ...+++||||+|++||++||||.||||||||+|+|.++.+|++|+|.++|.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 58999999999642 245899999999999999999999999999999999999999999999872
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
.++|+++|++. +....|+.++++. +.++....+++.++|+.+||++... .++.+|||||||||+|||||+
T Consensus 81 ~R~~IGMIFQhFn--LLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~-~yP~qLSGGQKQRVaIARALa 157 (339)
T COG1135 81 LRQKIGMIFQHFN--LLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKAD-RYPAQLSGGQKQRVAIARALA 157 (339)
T ss_pred HHhhccEEecccc--ccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhc-cCchhcCcchhhHHHHHHHHh
Confidence 46899999975 4455788877643 3444456788999999999996654 566899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
.+|+|||+|||||+|||++.+.++++|++. +.||++|||.++.+.++||||.||++|+|++ .|+..+.
T Consensus 158 ~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE-~G~v~~v 229 (339)
T COG1135 158 NNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVE-EGTVSEV 229 (339)
T ss_pred cCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEE-eccHHHh
Confidence 999999999999999999999999998765 5799999999999999999999999999985 6766554
No 47
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=355.53 Aligned_cols=201 Identities=24% Similarity=0.366 Sum_probs=176.0
Q ss_pred CeEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 398 PVIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
++|+++|+++.|+.+. .+++++|||+|.+||++||+|++|||||||.++|+|+.+|+.|+|.++|.
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 5799999999997543 13899999999999999999999999999999999999999999999883
Q ss_pred eeEEeeccchhcccCCCCCHHHHHhhcCC---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 464 LRFARYHQHLHELLDLDISPLDYMLQSFP---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 464 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
..+.+++|++...+++..++.+.+..... -...++++.++|+.+||.....++++.+|||||+|||||||||+.+|+
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~Pk 161 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPK 161 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCC
Confidence 34678899988778888887766543321 113455689999999999887778889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEe
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKW 598 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 598 (629)
+||||||||+||+..+..++++|.+. +-|+|+||||+..+..+||||+||++|++++.
T Consensus 162 lLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~ 223 (252)
T COG1124 162 LLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEI 223 (252)
T ss_pred EEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEe
Confidence 99999999999999999999998765 56999999999999999999999999999863
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.9e-46 Score=355.98 Aligned_cols=220 Identities=25% Similarity=0.287 Sum_probs=179.4
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
..|++++|+++||++.+++|+||+|++||+++|+||||||||||||+|.|+++|++|+|.+++.+ +......
T Consensus 7 ~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~--i~~ls~~------ 78 (263)
T COG1127 7 PLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGED--IPQLSEE------ 78 (263)
T ss_pred ceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcc--hhccCHH------
Confidence 36999999999999999999999999999999999999999999999999999999999987543 2111100
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
.....+.+++.++|+-..+...+..+|+.........++....++.+..-|+.+||.....+++|++||||+++|++|||
T Consensus 79 ~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLAR 158 (263)
T COG1127 79 ELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALAR 158 (263)
T ss_pred HHHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHH
Confidence 01122333444444444444444445444333344456777788889999999999977689999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||+.+|+||++||||+||||.+...+.+++++ ++.|+|+||||++.+..+|||++++.+|+|.++|.+
T Consensus 159 AialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 159 AIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 99999999999999999999998887777654 478999999999999999999999999999987654
No 49
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-45 Score=355.95 Aligned_cols=204 Identities=24% Similarity=0.349 Sum_probs=177.8
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
||+++|||+.|++ ..+++|+||+|+.||+++++|||||||||+||+|.+++.|++|+|.+++. .++|
T Consensus 1 MI~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 1 MIEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred CceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 5899999999963 34899999999999999999999999999999999999999999999873 4689
Q ss_pred eeccchhcccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCC-cccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTG-RQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
|+-|... +.+.+|+.+++.. ++......+++.++|+.+||+. ....+++++|||||||||.+||||+.+|+|
T Consensus 79 YviQqig--LFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 79 YVIQQIG--LFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhhcc--cCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCe
Confidence 9998864 6678899888753 2333345678999999999975 345667899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhh----cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAIND----FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~----~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||+|||+++|||-++..+.+.+.+ ++.|||+||||++++..++|||++|++|+|+.+ ++++++..
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~-~~P~~il~ 225 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQY-DTPDEILA 225 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEe-CCHHHHHh
Confidence 999999999999999998887755 478999999999999999999999999999864 66666654
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4e-45 Score=351.48 Aligned_cols=206 Identities=28% Similarity=0.389 Sum_probs=178.8
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
.++|++++|+++|++ ..|++|+||+|++||+++|+||||||||||||+|.|+++|++|+|+++|.
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 578999999999964 35999999999999999999999999999999999999999999999873
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
.++|.++|+- .+..++|+++++... +++...++.+..-|+.+||.+...+..+++|||||++||+||||++
T Consensus 84 r~r~GvlFQ~g--ALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAia 161 (263)
T COG1127 84 RKRMGVLFQQG--ALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIA 161 (263)
T ss_pred HhheeEEeecc--ccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHh
Confidence 3588999874 356678899887532 2332344556667899999987566677999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
.+|+||++||||+||||.+...+-++|.++ +.|+|+||||++.+..+|||++++.+|+|. |.|++++..+
T Consensus 162 ldPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~~Gt~~el~~ 235 (263)
T COG1127 162 LDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-AEGTPEELLA 235 (263)
T ss_pred cCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-EeCCHHHHHh
Confidence 999999999999999999988888777654 679999999999999999999999999997 7999988765
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-45 Score=363.70 Aligned_cols=219 Identities=22% Similarity=0.357 Sum_probs=168.3
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+.|+++|++++|++.++|+||||+|++|++++||||||||||||+|+|.|+++|..|+|.+++....-.. ....+.++.
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~-~~~~IgYVP 81 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRR-KRLRIGYVP 81 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccc-cCCeEEEcC
Confidence 3599999999999768999999999999999999999999999999999999999999998653211000 011122221
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHH--Hhhh--hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDI--YDRL--DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l--~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
+.. .+... .+.++.++... +... .........+.+.++|+.+|+. ++.++++.+|||||+|||
T Consensus 82 Q~~-----------~~d~~-fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~~r~i~~LSGGQ~QRV 148 (254)
T COG1121 82 QKS-----------SVDRS-FPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLRDRQIGELSGGQKQRV 148 (254)
T ss_pred ccc-----------ccCCC-CCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhhCCcccccCcHHHHHH
Confidence 110 01111 12233333322 1111 1112233468899999999997 789999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
.|||||+++|++|||||||+++|+.++..++++|+++ |+|||+||||++.+..+||+|++|+. ++.++|.+.+.+.
T Consensus 149 ~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~~ 227 (254)
T COG1121 149 LLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVLT 227 (254)
T ss_pred HHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhccC
Confidence 9999999999999999999999999999999988655 78999999999999999999999965 6667777666554
Q ss_pred H
Q psy10512 319 K 319 (629)
Q Consensus 319 ~ 319 (629)
.
T Consensus 228 ~ 228 (254)
T COG1121 228 E 228 (254)
T ss_pred H
Confidence 3
No 52
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-45 Score=350.49 Aligned_cols=213 Identities=25% Similarity=0.386 Sum_probs=184.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECC--------------c
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNS--------------H 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~--------------~ 463 (629)
.+|+++||++.|+++ ..+|++|||+|++||+++||||||||||||||+|.|+..|++|+|.+++ +
T Consensus 2 ~~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 2 MMIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred ceEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 479999999999754 4599999999999999999999999999999999999999999999887 2
Q ss_pred eeEEeeccchhcccCCCCCHHHHHhhc-------------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHH
Q psy10512 464 LRFARYHQHLHELLDLDISPLDYMLQS-------------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ~~~~~~~q~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 530 (629)
..+|+++|++. +....++++++..+ +....++..+-++|+++|+.+... ++..+|||||||||+
T Consensus 81 ~~iGmIfQ~~n--Lv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-qra~~LSGGQQQRVa 157 (258)
T COG3638 81 RDIGMIFQQFN--LVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-QRASTLSGGQQQRVA 157 (258)
T ss_pred HhceeEeccCC--cccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-HHhccCCcchhHHHH
Confidence 46899999864 55667777765432 223356677889999999987654 578999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||+++|+|||.|||+++|||.+.+.+++.|++. +.|||+..|+++++.++||||+-|.+|+|+ |+|+..+..
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv-fDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV-FDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE-EeCChhhhh
Confidence 999999999999999999999999999999999875 579999999999999999999999999997 899998877
Q ss_pred HHHHHHHHH
Q psy10512 607 ETLRAKVLK 615 (629)
Q Consensus 607 ~~~~~~~~~ 615 (629)
+....++..
T Consensus 237 ~~~~~~iYg 245 (258)
T COG3638 237 DEALDEIYG 245 (258)
T ss_pred HHHHHHHhc
Confidence 655555444
No 53
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-45 Score=354.57 Aligned_cols=193 Identities=28% Similarity=0.403 Sum_probs=167.4
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------eeEEeecc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------LRFARYHQ 471 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------~~~~~~~q 471 (629)
.++.++++++.|+. ..+|+|+||+|.+||+++|+||||||||||||+|+|+.+|++|+|.++|. ..++|++|
T Consensus 2 ~~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 2 ALLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred ceEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 46899999999964 45999999999999999999999999999999999999999999999874 37899999
Q ss_pred chhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 472 HLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
+.. +.+-.|+.+++.... +.....+++.++|+.+||.+... +++++|||||||||+|||||+.+|+||||||
T Consensus 80 ~~~--LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~-~~P~qLSGGMrQRVaiARAL~~~P~lLLlDE 156 (248)
T COG1116 80 EDA--LLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFED-KYPHQLSGGMRQRVAIARALATRPKLLLLDE 156 (248)
T ss_pred cCc--ccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhh-cCccccChHHHHHHHHHHHHhcCCCEEEEcC
Confidence 864 445568888765432 22234567999999999987654 5679999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeC--CEE
Q psy10512 547 PTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICEN--GKV 595 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~--G~i 595 (629)
|+++||..++..+.+.|.++ +.|||+||||++++-.++|||++|.+ |+|
T Consensus 157 PFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 157 PFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred CcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 99999999998888777553 68999999999999999999999998 445
No 54
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-45 Score=351.67 Aligned_cols=216 Identities=25% Similarity=0.399 Sum_probs=166.4
Q ss_pred eeEEEEeEEEEeCCee----eeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 86 RDVKIANFSITFHGCE----LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~----~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
++++++|+++.|++.. +|++|||+|.+||++||+|+||||||||.|+|+|+..|+.|+|.+.+.... ......
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~--~~~~~~- 78 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLA--PKKRAK- 78 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccC--ccccch-
Confidence 4699999999999877 999999999999999999999999999999999999999999988653211 110000
Q ss_pred hhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
.....+..++|... ...+..+..... .+.+......+.++++.++|+.+|+....+++++.+|||||+||
T Consensus 79 -------~~~~~VQmVFQDp~~SLnP~~tv~~~l--~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QR 149 (252)
T COG1124 79 -------AFYRPVQMVFQDPYSSLNPRRTVGRIL--SEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQR 149 (252)
T ss_pred -------hhccceeEEecCCccccCcchhHHHHH--hhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHH
Confidence 00000111111110 011111122111 11122122334556699999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||||||..+|++||||||||+||+..+..++++|.+ ++.|+|+||||+..+..+||||++|++|.+++....
T Consensus 150 iaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~ 226 (252)
T COG1124 150 IAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPT 226 (252)
T ss_pred HHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeech
Confidence 9999999999999999999999999999999998854 467999999999999999999999999999987544
No 55
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=347.57 Aligned_cols=219 Identities=25% Similarity=0.356 Sum_probs=177.0
Q ss_pred eeEEEEeEEEEe-CCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 86 RDVKIANFSITF-HGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 86 ~~i~i~nls~~y-~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
++|+++||++.| +++.+|+||||+|++||+++||||||||||||||+|+|+..|+.|++.+.+.. +......
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~--i~~~~~k----- 74 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQ--ITKLKGK----- 74 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccc--hhccchH-----
Confidence 469999999999 78899999999999999999999999999999999999999999988776432 2111111
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHH-------HhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDI-------YDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGW 237 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 237 (629)
.....+..++++++++...+......+++.. +..+..+-..+.+.++.++|+.+|+. +...++.++|||||
T Consensus 75 -~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~-~~A~qra~~LSGGQ 152 (258)
T COG3638 75 -ELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGIL-DKAYQRASTLSGGQ 152 (258)
T ss_pred -HHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcH-HHHHHHhccCCcch
Confidence 1122344455555655555444444444321 22233444556678899999999997 56778899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+|||+|||||+++|+|||.|||+++|||.+...+++.|++. |.|+|+..|+++.+.+|||||+-|++|+|+++|.+
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 99999999999999999999999999999999999998754 78999999999999999999999999999976544
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-45 Score=355.70 Aligned_cols=201 Identities=28% Similarity=0.391 Sum_probs=160.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.+.+++++++|++..+|+|+||+|.+||+++||||||||||||||+|+|++.|+.|+|.+.+....-+. ..+..+
T Consensus 3 ~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~---~~~~~v-- 77 (248)
T COG1116 3 LLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPG---PDIGYV-- 77 (248)
T ss_pred eEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCC---CCEEEE--
Confidence 489999999999999999999999999999999999999999999999999999999988653321111 111111
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
+|+...++..+..+|+ .+...+......+.++++.++|+.+||. ...+++|++|||||||||+||||
T Consensus 78 -----------FQ~~~LlPW~Tv~~NV-~l~l~~~~~~~~e~~~~a~~~L~~VgL~-~~~~~~P~qLSGGMrQRVaiARA 144 (248)
T COG1116 78 -----------FQEDALLPWLTVLDNV-ALGLELRGKSKAEARERAKELLELVGLA-GFEDKYPHQLSGGMRQRVAIARA 144 (248)
T ss_pred -----------eccCcccchhhHHhhh-eehhhccccchHhHHHHHHHHHHHcCCc-chhhcCccccChHHHHHHHHHHH
Confidence 1222222222222222 2222222345566677999999999997 57899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHH----hhcCCEEEEEecCHHHHHhhcceeEEEcCC
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEEL----KTYKRILVIISHSQDFLNGVCTNIIHLDKR 305 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L----~~~~~tvIivsHd~~~l~~~~d~ii~l~~G 305 (629)
|+.+|+|||||||+++||.-++..+.+.| .+.+.|||+||||.+++-.++|||++|.++
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999999988777655 445789999999999999999999999994
No 57
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-45 Score=378.50 Aligned_cols=223 Identities=25% Similarity=0.352 Sum_probs=186.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++||+++||+..+++|+||+|++||+++|+||||||||||||+|+|++.|++|.|.+.+.... .
T Consensus 5 ~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~-------------~ 71 (352)
T COG3842 5 ALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDIT-------------D 71 (352)
T ss_pred eEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECC-------------C
Confidence 599999999999999999999999999999999999999999999999999999999988654321 1
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc-cChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD-ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
++..+..+..++|....++..+..+|+.... .+.. ....+..+++.++|+.+++. ++.++++++|||||||||||||
T Consensus 72 lpp~kR~ig~VFQ~YALFPHltV~~NVafGL-k~~~~~~~~~i~~rv~e~L~lV~L~-~~~~R~p~qLSGGQqQRVALAR 149 (352)
T COG3842 72 VPPEKRPIGMVFQSYALFPHMTVEENVAFGL-KVRKKLKKAEIKARVEEALELVGLE-GFADRKPHQLSGGQQQRVALAR 149 (352)
T ss_pred CChhhcccceeecCcccCCCCcHHHHhhhhh-hhcCCCCHHHHHHHHHHHHHHcCch-hhhhhChhhhChHHHHHHHHHH
Confidence 2334455666677766666655555443222 2222 23345778999999999997 5899999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELK----TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTR 321 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~----~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~ 321 (629)
||+.+|+|||||||.|+||..-+..+...|+ +.|.|.|+||||.+++..++|||++|++|+|...|.+.+.|..+.
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~ 229 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPA 229 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcc
Confidence 9999999999999999999998887776554 558999999999999999999999999999999999988887765
Q ss_pred HHH
Q psy10512 322 LEL 324 (629)
Q Consensus 322 ~~~ 324 (629)
...
T Consensus 230 ~~f 232 (352)
T COG3842 230 TRF 232 (352)
T ss_pred hHH
Confidence 433
No 58
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.8e-43 Score=408.38 Aligned_cols=333 Identities=22% Similarity=0.264 Sum_probs=229.5
Q ss_pred HHHHHHHHhCCCCchh-hhcccCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEE
Q psy10512 210 ARAANILHGLGFTKEM-QQKKTKDFSGGWRMRIALARALYVKP--HLLLLDEPTNHLDLDACVWLEEELKTY---KRILV 283 (629)
Q Consensus 210 ~~~~~~L~~lgl~~~~-~~~~~~~LSGGqrqRv~LAraL~~~P--~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvI 283 (629)
.++. +|+.+||. ++ .++++.+|||||+|||+||+||+.+| +||||||||++||+..+.+|.+.|+++ |.|||
T Consensus 468 ~rl~-~L~~vGL~-~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TVI 545 (943)
T PRK00349 468 ERLK-FLVDVGLD-YLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTLI 545 (943)
T ss_pred HHHH-HhhccccC-CCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 4443 78889996 34 68999999999999999999999997 999999999999999999999987654 78999
Q ss_pred EEecCHHHHHhhcceeEEE------cCCeEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHH
Q psy10512 284 IISHSQDFLNGVCTNIIHL------DKRKLKYYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLA 357 (629)
Q Consensus 284 ivsHd~~~l~~~~d~ii~l------~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (629)
+||||++++. .||+|++| ++|++++. |+++.+...... +. ..+.
T Consensus 546 vVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv~~-g~~~e~~~~~~~-l~----------------~~~l----------- 595 (943)
T PRK00349 546 VVEHDEDTIR-AADYIVDIGPGAGVHGGEVVAS-GTPEEIMKNPNS-LT----------------GQYL----------- 595 (943)
T ss_pred EEeCCHHHHH-hCCEEEEeccccCCCCCEEeec-cCHHHHhcChhh-ee----------------ehhh-----------
Confidence 9999999987 69999999 88999865 454443211000 00 0000
Q ss_pred HHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCC
Q psy10512 358 RQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNG 437 (629)
Q Consensus 358 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NG 437 (629)
.... ....... + .....+.|++++++. . .|+++||+|+.|++++|+|+||
T Consensus 596 -------------~~~~-~~~~~~~-------~--~~~~~~~L~v~~l~~------~-~L~~isl~Ip~GeivgVtGvsG 645 (943)
T PRK00349 596 -------------SGKK-KIEVPKE-------R--RKGNGKFLKLKGARE------N-NLKNVDVEIPLGKFTCVTGVSG 645 (943)
T ss_pred -------------cccc-ccccccc-------c--cCCCcceEEecCCcc------C-CcCceEEEEeCCCEEEEEcCCC
Confidence 0000 0000000 0 011234789999862 1 4899999999999999999999
Q ss_pred CchHHHHHHHH---------cCCCCCccE------------EEECC-------c-----------------------eeE
Q psy10512 438 AGKSTLLNLIY---------GDLTPSVGM------------VRKNS-------H-----------------------LRF 466 (629)
Q Consensus 438 sGKSTLlk~l~---------G~~~p~~G~------------i~~~~-------~-----------------------~~~ 466 (629)
||||||++-+. +...+..+. |.++. + ...
T Consensus 646 SGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~ 725 (943)
T PRK00349 646 SGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKAR 725 (943)
T ss_pred CCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCcccccc
Confidence 99999998763 111111100 11100 0 000
Q ss_pred Eeeccchhccc----------------------------------------------------CCCCCHHHHHhhcCCCh
Q psy10512 467 ARYHQHLHELL----------------------------------------------------DLDISPLDYMLQSFPEV 494 (629)
Q Consensus 467 ~~~~q~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~~~ 494 (629)
+|..+++..+. ...+++.+.+.. +...
T Consensus 726 g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~-f~~~ 804 (943)
T PRK00349 726 GYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEF-FEAI 804 (943)
T ss_pred CCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHH-HHhc
Confidence 11111110000 001122211110 0000
Q ss_pred hhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC---CEEEEeCCCCCCCHHHHHHHHHHHhhc---Cc
Q psy10512 495 KDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP---HLLLLDEPTNHLDMETIDALADAINDF---EG 568 (629)
Q Consensus 495 ~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p---~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~ 568 (629)
.......+.|..+||......+++.+|||||+|||.||++|+.+| +++||||||+|||+..+..|++.|.++ +.
T Consensus 805 ~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~ 884 (943)
T PRK00349 805 PKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGN 884 (943)
T ss_pred hhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 011234567888999754445678999999999999999999999 999999999999999999999998876 56
Q ss_pred eEEEEecCHHHHHhhcCEEEEE------eCCEEEEecCCHHHHHH
Q psy10512 569 GLVLVSHDFRLINQVAEEIWIC------ENGKVTKWEGNILDYKE 607 (629)
Q Consensus 569 ~vi~vsHd~~~~~~~~d~i~~l------~~G~i~~~~g~~~~~~~ 607 (629)
|||+||||++++. .||+|++| ++|+|+ +.|+++++.+
T Consensus 885 TVIiitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv-~~Gt~~el~~ 927 (943)
T PRK00349 885 TVVVIEHNLDVIK-TADWIIDLGPEGGDGGGEIV-ATGTPEEVAK 927 (943)
T ss_pred EEEEEecCHHHHH-hCCEEEEecCCcCCCCCEEE-EeCCHHHHHh
Confidence 9999999999995 79999999 689997 5788877653
No 59
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.7e-44 Score=348.06 Aligned_cols=195 Identities=28% Similarity=0.424 Sum_probs=168.1
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+++++||++.|..+. ..+|+++||+|++||+++|+|||||||||||++|.|+.+|++|.|.+++.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 468999999996432 24899999999999999999999999999999999999999999998862
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhc--CCCh---hhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQS--FPEV---KDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..+||++|.+. +-.++|+.+++... +... ...+.+..+++.+||.+...++++.+|||||||||+|||||+
T Consensus 81 R~~~iGfvFQ~~n--Ll~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 81 RRKKIGFVFQNFN--LLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHhEEEECccCC--CCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 35899999864 56778999886521 1111 235677889999999877665778999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
.+|++||.||||.+||.++.+.++++|.++ +.|||+||||...+. +|||++.|.+|++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 999999999999999999999999999776 459999999999885 79999999999954
No 60
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5.3e-43 Score=420.72 Aligned_cols=329 Identities=21% Similarity=0.285 Sum_probs=227.5
Q ss_pred HHHhCCCCchhhhcccCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCH
Q psy10512 215 ILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKP--HLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQ 289 (629)
Q Consensus 215 ~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P--~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~ 289 (629)
.|..+||.....++.+.+|||||+|||+||+||+.+| ++|||||||++||+..+..|.+.|+++ +.|||+||||+
T Consensus 459 ~L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~ 538 (1809)
T PRK00635 459 ILIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDE 538 (1809)
T ss_pred HHHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcH
Confidence 4557788632258899999999999999999999999 899999999999999999999888754 68999999999
Q ss_pred HHHHhhcceeEEEc------CCeEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH
Q psy10512 290 DFLNGVCTNIIHLD------KRKLKYYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSK 363 (629)
Q Consensus 290 ~~l~~~~d~ii~l~------~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (629)
++ ..+||+|++|. +|++++. |+.+.+...... + ...+.
T Consensus 539 ~v-i~~aDrVi~L~pGag~~gG~Iv~~-G~~~eil~~~~~---------------l--~~~~l----------------- 582 (1809)
T PRK00635 539 QM-ISLADRIIDIGPGAGIFGGEVLFN-GSPREFLAKSDS---------------L--TAKYL----------------- 582 (1809)
T ss_pred HH-HHhCCEEEEEcCCcccCCCEEEEe-cCHHHHhhChHH---------------H--HHHHh-----------------
Confidence 95 57999999996 6788764 454443211000 0 00000
Q ss_pred HHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHH
Q psy10512 364 EKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTL 443 (629)
Q Consensus 364 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTL 443 (629)
........ |.......+.|++++++. . .|+++||+|+.|++++|+|+||||||||
T Consensus 583 --------~~~~~~~~----------~~~~~~~~~~L~l~~~~~------~-~Lk~isl~Ip~Geiv~VtG~nGSGKSTL 637 (1809)
T PRK00635 583 --------RQELTIPI----------PEKRTNSLGTLTLSKATK------H-NLKDLTISLPLGRLTVVTGVSGSGKSSL 637 (1809)
T ss_pred --------cCcccccC----------cccccCCCCeEEEecccc------C-CccceEEEEcCCcEEEEEcCCCCCHHHH
Confidence 00000000 000001124688998862 1 5999999999999999999999999999
Q ss_pred HH---------HHHcCCCCCc------------------------cEEEECC-----c---------eeEE-----eecc
Q psy10512 444 LN---------LIYGDLTPSV------------------------GMVRKNS-----H---------LRFA-----RYHQ 471 (629)
Q Consensus 444 lk---------~l~G~~~p~~------------------------G~i~~~~-----~---------~~~~-----~~~q 471 (629)
++ .|.|...+.. +.+++-+ + ...+ +.++
T Consensus 638 l~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn 717 (1809)
T PRK00635 638 INDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFN 717 (1809)
T ss_pred HHHHHHHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeec
Confidence 99 6666543311 1122100 0 0000 0011
Q ss_pred c---------------h---hc------------------ccCCCCCHHHHHhhc-------CC-ChhhHHHHHHHHHHc
Q psy10512 472 H---------------L---HE------------------LLDLDISPLDYMLQS-------FP-EVKDREEMRKIIGRY 507 (629)
Q Consensus 472 ~---------------~---~~------------------~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~l~~~ 507 (629)
. . .. ......++.+.+... +. .....+.+ ++|+.+
T Consensus 718 ~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~v 796 (1809)
T PRK00635 718 TPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSL 796 (1809)
T ss_pred CCCCCCCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHc
Confidence 0 0 00 000112222222110 10 11223344 578899
Q ss_pred CCCCcccccCcCcCChhHHHHHHHHHHHc---cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHH
Q psy10512 508 GLTGRQQVCPIRQLSDGQKCRVVFAYLAW---QAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLIN 581 (629)
Q Consensus 508 gl~~~~~~~~~~~LSgGqkqrv~lAral~---~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~ 581 (629)
||......+++.+|||||+|||+||++|+ .+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++
T Consensus 797 GL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i- 875 (1809)
T PRK00635 797 GLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV- 875 (1809)
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-
Confidence 99754345688999999999999999997 699999999999999999999999998765 56899999999999
Q ss_pred hhcCEEEEEe------CCEEEEecCCHHHHHH
Q psy10512 582 QVAEEIWICE------NGKVTKWEGNILDYKE 607 (629)
Q Consensus 582 ~~~d~i~~l~------~G~i~~~~g~~~~~~~ 607 (629)
.+||++++|. +|+++ ..|+++++..
T Consensus 876 ~~aDrVi~L~p~gg~~~G~iv-~~Gtpeel~~ 906 (1809)
T PRK00635 876 KVADYVLELGPEGGNLGGYLL-ASCSPEELIH 906 (1809)
T ss_pred HhCCEEEEEccCCCCCCCEEE-EeCCHHHHHh
Confidence 7999999996 78886 5788887754
No 61
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-44 Score=337.30 Aligned_cols=216 Identities=24% Similarity=0.375 Sum_probs=178.6
Q ss_pred eEEEEeEEEEeCCee-eeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFHGCE-LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~~~~-~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|++.+++++|+... +++||||+++.|+++||+|||||||||+||+|++++.|++|.+.+.+.+..-.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p---------- 70 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP---------- 70 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh----------
Confidence 488999999999876 999999999999999999999999999999999999999999999765421111
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
...+..++-...+ ..++...+.+++...+.++..+...+.++++.++.+.|++. +..++.+.+||-|+||||+|||
T Consensus 71 --~~vrr~IGVl~~e-~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~-~~~~rRv~~~S~G~kqkV~iAR 146 (245)
T COG4555 71 --SFVRRKIGVLFGE-RGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLL-EYLDRRVGEFSTGMKQKVAIAR 146 (245)
T ss_pred --HHHhhhcceecCC-cChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChH-HHHHHHHhhhchhhHHHHHHHH
Confidence 0111111111111 11223345566666677787888888899999999999996 7889999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
||+++|++|+|||||||||..++..+.+.+++. +++||++||+++++..+||+|++|++|++++.+.....
T Consensus 147 Alvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l 220 (245)
T COG4555 147 ALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEAL 220 (245)
T ss_pred HHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHH
Confidence 999999999999999999999999999887655 68999999999999999999999999999976554443
No 62
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-44 Score=339.15 Aligned_cols=228 Identities=23% Similarity=0.318 Sum_probs=183.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCC-----CceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVP-----DHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~-----g~i~i~~~~~~~~~~~~~~~ 161 (629)
.++++||++.||++.+|+|||+.|+++.+++||||||||||||||+|+.+....+ |.|.+ .++++....
T Consensus 7 ~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~--~g~ni~~~~---- 80 (253)
T COG1117 7 AIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLL--DGKNIYDPK---- 80 (253)
T ss_pred eeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEE--CCeeccCCC----
Confidence 5899999999999999999999999999999999999999999999999887776 44443 333332211
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCch---hhhcccCCCChHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKE---MQQKKTKDFSGGWR 238 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~---~~~~~~~~LSGGqr 238 (629)
.++...|.++++++++...++ .+..++ .....++..+.....++.++..|+...|+++ .+++.+..||||||
T Consensus 81 ---~d~~~lRr~vGMVFQkPnPFp-~SIydN-VayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQ 155 (253)
T COG1117 81 ---VDVVELRRRVGMVFQKPNPFP-MSIYDN-VAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQ 155 (253)
T ss_pred ---CCHHHHHHHheeeccCCCCCC-chHHHH-HHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHH
Confidence 122345667777766655543 233333 3333344444446677889999999988754 45677889999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--CEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYK--RILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~--~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
||++|||||+.+|+|||||||||+|||.+...+++++.+++ -|||+|||+|..+.+++|++.++..|++++++.+...
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 99999999999999999999999999999999999988774 6999999999999999999999999999999998888
Q ss_pred HHHHHHHHH
Q psy10512 317 FCKTRLELL 325 (629)
Q Consensus 317 ~~~~~~~~~ 325 (629)
|..++.++.
T Consensus 236 F~~P~~~~T 244 (253)
T COG1117 236 FTNPKHKRT 244 (253)
T ss_pred hcCccHHHH
Confidence 877665443
No 63
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.1e-42 Score=402.65 Aligned_cols=327 Identities=20% Similarity=0.266 Sum_probs=221.4
Q ss_pred HHHhCCCCchhhhcccCCCChHHHHHHHHHHHHccCC--CEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCH
Q psy10512 215 ILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKP--HLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQ 289 (629)
Q Consensus 215 ~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P--~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~ 289 (629)
.|..+||.....++++.+|||||+|||+||++|+.+| .+|||||||++||+..+..|.+.|+++ |.|||+|+||+
T Consensus 470 ~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~ 549 (924)
T TIGR00630 470 FLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDE 549 (924)
T ss_pred hHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4777888532268999999999999999999999986 899999999999999999999988654 67999999999
Q ss_pred HHHHhhcceeEEE------cCCeEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChhHHHHHHHHH
Q psy10512 290 DFLNGVCTNIIHL------DKRKLKYYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSK 363 (629)
Q Consensus 290 ~~l~~~~d~ii~l------~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (629)
+++. +||+|++| ++|+|++.+ +.+.+..... .+. ..+
T Consensus 550 ~~i~-~aD~vi~LgpgaG~~~G~Iv~~g-~~~el~~~~~------------------~lt---~~~-------------- 592 (924)
T TIGR00630 550 ETIR-AADYVIDIGPGAGIHGGEVVASG-TPEEILANPD------------------SLT---GQY-------------- 592 (924)
T ss_pred HHHh-hCCEEEEecccccCCCCEEeecc-CHHHHhcCch------------------hee---eec--------------
Confidence 9987 89999999 899998654 4333211000 000 000
Q ss_pred HHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHH
Q psy10512 364 EKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTL 443 (629)
Q Consensus 364 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTL 443 (629)
........... . ..+...+.|+++|++. . .|+++||+|+.|++++|+|+||||||||
T Consensus 593 -------l~~~~~~~~~~-~--------~~~~~~~~l~l~~~~~------~-~Lk~vsl~Ip~Geiv~VtGvsGSGKSTL 649 (924)
T TIGR00630 593 -------LSGKKKIEVPK-E--------RRPGNGKFLTLKGARE------N-NLKNITVSIPLGLFTCITGVSGSGKSTL 649 (924)
T ss_pred -------ccccccccccc-c--------ccCCCcceEEEEeCcc------C-CcCceEEEEeCCCEEEEECCCCCCHHHH
Confidence 00000000000 0 0011234789999873 1 4999999999999999999999999999
Q ss_pred HHHHH---------c-CCCCC-----cc------EEEECCc-------e-------------------------------
Q psy10512 444 LNLIY---------G-DLTPS-----VG------MVRKNSH-------L------------------------------- 464 (629)
Q Consensus 444 lk~l~---------G-~~~p~-----~G------~i~~~~~-------~------------------------------- 464 (629)
++-+. + ...|. .| .|.++.. .
T Consensus 650 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~ 729 (924)
T TIGR00630 650 INDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGR 729 (924)
T ss_pred HHHHHHHHHHHHhcccccCCCCcCccccccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhh
Confidence 98322 1 11111 11 0111100 0
Q ss_pred --------------eEEeeccchhccc------------------------------CCCCCHHHHHhhcCCChhhHHHH
Q psy10512 465 --------------RFARYHQHLHELL------------------------------DLDISPLDYMLQSFPEVKDREEM 500 (629)
Q Consensus 465 --------------~~~~~~q~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 500 (629)
..|++.-++.... .+++++.+.+.. +.........
T Consensus 730 FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f-~~~~~~i~~~ 808 (924)
T TIGR00630 730 FSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEF-FEAVPSISRK 808 (924)
T ss_pred cCCCCCCCCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHH-HHhccchhHH
Confidence 0000000000000 000011110000 0000011234
Q ss_pred HHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc---CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEe
Q psy10512 501 RKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ---APHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVS 574 (629)
Q Consensus 501 ~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~---~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vs 574 (629)
.++|..+||......+++.+|||||+|||.||++|+. +|+++||||||+|||+.++..|.+.|.++ +.|||+||
T Consensus 809 l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~ 888 (924)
T TIGR00630 809 LQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIE 888 (924)
T ss_pred HHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 5678889997544456889999999999999999997 59999999999999999999999999876 56899999
Q ss_pred cCHHHHHhhcCEEEEE------eCCEEEEecCCHHH
Q psy10512 575 HDFRLINQVAEEIWIC------ENGKVTKWEGNILD 604 (629)
Q Consensus 575 Hd~~~~~~~~d~i~~l------~~G~i~~~~g~~~~ 604 (629)
||++++. .||+|++| ++|+|+ +.|++++
T Consensus 889 H~~~~i~-~aD~ii~Lgp~~G~~gG~iv-~~G~~~~ 922 (924)
T TIGR00630 889 HNLDVIK-TADYIIDLGPEGGDGGGTIV-ASGTPEE 922 (924)
T ss_pred CCHHHHH-hCCEEEEecCCccCCCCEEE-EeCCHHH
Confidence 9999995 69999999 699997 5787654
No 64
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=328.68 Aligned_cols=239 Identities=23% Similarity=0.351 Sum_probs=197.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh--hhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL--TCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~--~~~ 164 (629)
.|+++|+.++||...+|++|||+-++|+++.|||.||||||||||||+-++.|..|.|.+++............+ ..-
T Consensus 6 ~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad~ 85 (256)
T COG4598 6 ALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPADK 85 (256)
T ss_pred ceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCCH
Confidence 489999999999999999999999999999999999999999999999999999999988765433322211111 011
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
.++...|.++.++++.+..+...+..++.++..-..-.....++.+++..+|..+|+. +..+.++..|||||+||++||
T Consensus 86 ~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~-ek~~~YP~~LSGGQQQR~aIA 164 (256)
T COG4598 86 RQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIA-EKADAYPAHLSGGQQQRVAIA 164 (256)
T ss_pred HHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCch-hhhhcCccccCchHHHHHHHH
Confidence 1233445667777777776666666666666555555567788889999999999996 567899999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh---cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKT---YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTR 321 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~---~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~ 321 (629)
|||+.+|+++|+|||||+|||+-.-+++..+++ .|+|+++|||.+.|+..+++++++|++|.|.+.|.|.+.|..+.
T Consensus 165 RaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf~nP~ 244 (256)
T COG4598 165 RALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVFGNPQ 244 (256)
T ss_pred HHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChHHHhcCCC
Confidence 999999999999999999999998888777655 48999999999999999999999999999999998888887665
Q ss_pred HHHHH
Q psy10512 322 LELLE 326 (629)
Q Consensus 322 ~~~~~ 326 (629)
.+++.
T Consensus 245 S~Rlk 249 (256)
T COG4598 245 SPRLK 249 (256)
T ss_pred CHHHH
Confidence 55443
No 65
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.2e-44 Score=330.73 Aligned_cols=197 Identities=29% Similarity=0.437 Sum_probs=173.9
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~ 464 (629)
||+++||++.|+.+ +.+|+||||+|++||++-|+||||||||||||+|++..+|++|.|++++. .
T Consensus 1 mI~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 1 MIRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred CeeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 58999999999876 55999999999999999999999999999999999999999999998763 4
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|.++|++. +-.+.|++++++.. .+....++++.++|+.+||.+.... .+.+|||||||||+||||++.+|
T Consensus 80 ~IGvVFQD~r--LL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~-lP~~LSGGEQQRvaIARAiV~~P 156 (223)
T COG2884 80 QIGVVFQDFR--LLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARA-LPSQLSGGEQQRVAIARAIVNQP 156 (223)
T ss_pred eeeeEeeecc--ccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhc-CccccCchHHHHHHHHHHHccCC
Confidence 6899999875 44667888887542 3344567789999999999877654 45899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEec
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWE 599 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~ 599 (629)
++||.||||.+|||+....+++++.++ +.|||+.|||.+++..+-.|++.+++|+++..+
T Consensus 157 ~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 157 AVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred CeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999888766 568999999999999999999999999998643
No 66
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-43 Score=350.23 Aligned_cols=206 Identities=29% Similarity=0.430 Sum_probs=178.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
+++.+++++|.|+++ ..+++++||+|.+|++++|+|+||||||||+++|+|+++|++|.|.+++. ..
T Consensus 2 ~~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 2 RMIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred ceEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 478999999999765 45999999999999999999999999999999999999999999988763 35
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+|+++|++..++. ..|+.+.+..+ .+.....+++.++|+.+|+.+. .++++..|||||||||+||.+|+.+|+
T Consensus 81 vG~VfQnpd~q~~-~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~-~~r~p~~LSGGqkqRvaIA~vLa~~P~ 158 (235)
T COG1122 81 VGLVFQNPDDQLF-GPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEEL-LDRPPFNLSGGQKQRVAIAGVLAMGPE 158 (235)
T ss_pred eEEEEECcccccc-cCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhh-ccCCccccCCcceeeHHhhHHHHcCCC
Confidence 8999999876654 44666655432 2332356778899999999876 456789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|||||||++||+.++..+++.+.++ +.|||++|||++++..+|||+|+|++|+++ ++|++.++.+
T Consensus 159 iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~-~~g~p~~i~~ 228 (235)
T COG1122 159 ILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKIL-ADGDPAEIFN 228 (235)
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEe-ecCCHHHHhh
Confidence 99999999999999999999999887 358999999999999999999999999996 6888766543
No 67
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.3e-44 Score=347.41 Aligned_cols=212 Identities=26% Similarity=0.410 Sum_probs=165.4
Q ss_pred EEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
++++||++.|+. ..+|+++||+|++||+++|+|||||||||||++|+|+..|++|.+.+.+.. +...+....
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d--~~~l~~~~~-- 77 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKD--LTKLSEKEL-- 77 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEE--cCcCCHHHH--
Confidence 679999999964 369999999999999999999999999999999999999999998886522 221111000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
....+..++.++|++...+..+..+++. +...+..........++..+++.+|+.+...+++|.+|||||||||||
T Consensus 78 ---~~~R~~~iGfvFQ~~nLl~~ltv~ENv~-lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAI 153 (226)
T COG1136 78 ---AKLRRKKIGFVFQNFNLLPDLTVLENVE-LPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAI 153 (226)
T ss_pred ---HHHHHHhEEEECccCCCCCCCCHHHHHH-hHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHH
Confidence 0011223344455555555555555443 333333333335567888999999998555558899999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
||||+.+|+|||.||||.+||.++...+++.|.++ +.|||+||||...+. +|||++.|.+|++.
T Consensus 154 ARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 154 ARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred HHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 99999999999999999999999999999988655 679999999998877 89999999999854
No 68
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=366.14 Aligned_cols=219 Identities=25% Similarity=0.373 Sum_probs=183.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++||++.||+..+|+|+||+|+.||+++|+||||||||||||+|+|++.|++|+|.|.+....-
T Consensus 3 ~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~------------- 69 (338)
T COG3839 3 ELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTD------------- 69 (338)
T ss_pred EEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCC-------------
Confidence 4999999999998669999999999999999999999999999999999999999999987543221
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+.....+..++|+...++. .++.+++.+..++.....++.++++.++++.++++ +++++++.+||||||||||||||
T Consensus 70 l~P~~R~iamVFQ~yALyPh-mtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~-~lL~r~P~~LSGGQrQRVAlaRA 147 (338)
T COG3839 70 LPPEKRGIAMVFQNYALYPH-MTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLE-HLLNRKPLQLSGGQRQRVALARA 147 (338)
T ss_pred CChhHCCEEEEeCCccccCC-CcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCCh-hHHhcCcccCChhhHHHHHHHHH
Confidence 11112222333444444444 44444555555555667788899999999999997 68899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
|+.+|+++|||||+|+||...+..+...|++ ++.|+|+||||..++..++|||++|++|+|...|.+.+.|.+.
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999998887776654 5789999999999999999999999999999999998887654
No 69
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-44 Score=354.73 Aligned_cols=223 Identities=24% Similarity=0.336 Sum_probs=176.9
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecc-cCCCCCcchhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTR-EMPASDKSALTCV 164 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~-~~~~~~~~~~~~~ 164 (629)
|+|+++|+++.|+...+++||||+|+.||.++|+||||||||||||+|+|++.|+.|.|.+++..- +..
T Consensus 1 m~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~---------- 70 (345)
T COG1118 1 MSIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVS---------- 70 (345)
T ss_pred CceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchh----------
Confidence 468999999999999999999999999999999999999999999999999999999998754200 000
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhh-hhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDR-LDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
........++.+++....++..+..+++...... ....+......++.++|..+.|+ .+.++++.+|||||||||||
T Consensus 71 -~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~-~la~ryP~QLSGGQrQRVAL 148 (345)
T COG1118 71 -NLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLE-GLADRYPAQLSGGQRQRVAL 148 (345)
T ss_pred -ccchhhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhccc-chhhcCchhcChHHHHHHHH
Confidence 0111222334444444444444433333221111 11233456778999999999997 68999999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELK----TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCK 319 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~----~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~ 319 (629)
||||+.+|++||||||+++||..-+..|..+|+ +++.|.|+||||++++..+||||++|++|+|...+.+.+.|..
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 999999999999999999999988776666554 5589999999999999999999999999999999888887754
Q ss_pred H
Q psy10512 320 T 320 (629)
Q Consensus 320 ~ 320 (629)
.
T Consensus 229 P 229 (345)
T COG1118 229 P 229 (345)
T ss_pred C
Confidence 3
No 70
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-43 Score=351.74 Aligned_cols=222 Identities=27% Similarity=0.373 Sum_probs=171.1
Q ss_pred eeEEEEeEEEEeCCe-eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 86 RDVKIANFSITFHGC-ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 86 ~~i~i~nls~~y~~~-~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
++++++|++++|++. .+|+++||+|++|++++|+|+||||||||+++|+|+++|++|.+.+.+...... ..
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~-~~------- 73 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSE-KS------- 73 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccch-hh-------
Confidence 368999999999775 899999999999999999999999999999999999999999997654321100 00
Q ss_pred hhchHHHHHHHHHHHHHhc-cCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVA-CEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
....+...+.++|+... +...+..+++...... ..++.++++.++.++|+.+|+. +++++++.+|||||||||+|
T Consensus 74 --~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n-~g~~~~e~~~rv~~~l~~vgl~-~~~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 74 --LLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN-LGLPREEIEERVAEALELVGLE-ELLDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred --HHHhhcceEEEEECcccccccCcHHHHHhhchhh-cCCCHHHHHHHHHHHHHHcCch-hhccCCccccCCcceeeHHh
Confidence 00000111111111000 1112222222211111 2344556889999999999997 56899999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCK 319 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~ 319 (629)
|.+|+++|++|||||||++||+.++.++++.++++ +.|+|++|||++++..+||++++|++|+++..|.+++.+..
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999998776 47999999999999999999999999999988877666543
No 71
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=9e-43 Score=382.62 Aligned_cols=208 Identities=36% Similarity=0.575 Sum_probs=182.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhccc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELL 477 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~ 477 (629)
.+|+++|+++.|+. . .+|+++||+|.+|+++||||+||||||||||+|+|.+.|++|+|...+..+++|+.|+.. .
T Consensus 2 ~~i~~~~ls~~~g~-~-~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~--~ 77 (530)
T COG0488 2 SMITLENLSLAYGD-R-PLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP--L 77 (530)
T ss_pred ceEEEeeeEEeeCC-c-eeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC--c
Confidence 47999999999953 3 489999999999999999999999999999999999999999999998889999999864 3
Q ss_pred CCCCCHHHHHhhcCCC-----------------------------------hhhHHHHHHHHHHcCCCCcccccCcCcCC
Q psy10512 478 DLDISPLDYMLQSFPE-----------------------------------VKDREEMRKIIGRYGLTGRQQVCPIRQLS 522 (629)
Q Consensus 478 ~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~~LS 522 (629)
+...|+.+++...+.. ...+.++..+|..+|++.. .+++++||
T Consensus 78 ~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LS 155 (530)
T COG0488 78 DPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLS 155 (530)
T ss_pred CCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcC
Confidence 4444666554332211 0123567788889999865 57999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCH
Q psy10512 523 DGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602 (629)
Q Consensus 523 gGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 602 (629)
||||.||+||+||+.+|++|||||||||||.+++.+|.+.|.++.+|||+||||.+|+..+|++|+.++.|++..|.|+|
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy10512 603 LDYKETLRA 611 (629)
Q Consensus 603 ~~~~~~~~~ 611 (629)
+.|.+....
T Consensus 236 ~~~~~~r~~ 244 (530)
T COG0488 236 SSYLEQKAE 244 (530)
T ss_pred HHHHHHHHH
Confidence 999875433
No 72
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6e-42 Score=357.49 Aligned_cols=206 Identities=25% Similarity=0.376 Sum_probs=176.5
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------ee
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LR 465 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~ 465 (629)
..++|+++||+++|++ ..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|. ..
T Consensus 4 ~~~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 4 SVAPIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQR 81 (306)
T ss_pred CCceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhc
Confidence 3468999999999963 35999999999999999999999999999999999999999999998763 35
Q ss_pred EEeeccchhcccCCCCCHHHHHhh--cC---CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQ--SF---PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|... +...+|+.+++.. .. +......++.++++.+++... .++++..|||||||||+||+||+.+|+
T Consensus 82 ig~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrl~la~aL~~~P~ 158 (306)
T PRK13537 82 VGVVPQFDN--LDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-ADAKVGELSGGMKRRLTLARALVNDPD 158 (306)
T ss_pred EEEEeccCc--CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-hcCchhhCCHHHHHHHHHHHHHhCCCC
Confidence 899998753 4456788877642 11 111234567789999999754 456789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|||||||+|||+.++..+++.|.++ +.|||++||+++++..+||+|++|++|+++ +.|+++++.+
T Consensus 159 lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~ 227 (306)
T PRK13537 159 VLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKI-AEGAPHALIE 227 (306)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 99999999999999999999999876 468999999999999999999999999997 5788887754
No 73
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=360.59 Aligned_cols=205 Identities=24% Similarity=0.341 Sum_probs=177.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEE
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFA 467 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~ 467 (629)
.+.|+++||++.|+ ...+++|+||+|.+||+++|+||||||||||||+|+|+..|++|+|.++|. ..++
T Consensus 3 ~~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 3 KPALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred CceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 45799999999997 345899999999999999999999999999999999999999999999874 4689
Q ss_pred eeccchhcccCCCCCHHHHHhhcCC-----C-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFP-----E-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+++|+.. +++.+|+.+++..+.. . ....+++.++|+.++|.+... +++.+|||||||||+|||||+.+|++
T Consensus 81 ~VFQ~YA--LFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~-R~p~qLSGGQqQRVALARAL~~~P~v 157 (352)
T COG3842 81 MVFQSYA--LFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFAD-RKPHQLSGGQQQRVALARALVPEPKV 157 (352)
T ss_pred eeecCcc--cCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhh-hChhhhChHHHHHHHHHHHhhcCcch
Confidence 9999864 6788999999765543 1 124468999999999998665 46699999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhh----cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAIND----FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~----~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||||.++||..-+..+...|++ .+.|.|+||||.+++..++|||++|++|+|. ..|+++++-.
T Consensus 158 LLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~-Q~gtP~eiY~ 226 (352)
T COG3842 158 LLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIE-QVGTPEEIYE 226 (352)
T ss_pred hhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCcee-ecCCHHHHhh
Confidence 999999999999888777766654 4779999999999999999999999999997 4688777543
No 74
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.1e-42 Score=360.75 Aligned_cols=204 Identities=21% Similarity=0.327 Sum_probs=173.5
Q ss_pred eEEEEEEEEEEcCC--CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDD--GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~--~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
||+++||+++|+.+ ...+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.+++.
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 58999999999532 235899999999999999999999999999999999999999999998763
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
..++|++|+.. +....|+.+++... .+.....+++.++++.+||.+.. ++++.+|||||||||+|||||+.
T Consensus 81 r~~Ig~v~Q~~~--l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-~~~~~~LSgGqkQRV~IARAL~~ 157 (343)
T TIGR02314 81 RRQIGMIFQHFN--LLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-DSYPSNLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEECCcc--ccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHHh
Confidence 25889999863 34456888776432 12223345678999999998654 56779999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|++|||||||++||+.++..++++|+++ +.|||+||||++++..+||+|++|++|+++ ..|++.++.
T Consensus 158 ~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv-~~g~~~~v~ 229 (343)
T TIGR02314 158 NPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELI-EQGTVSEIF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999999999999999998775 569999999999999999999999999997 468776653
No 75
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.4e-43 Score=324.01 Aligned_cols=215 Identities=23% Similarity=0.306 Sum_probs=176.5
Q ss_pred eEEEEeEEEEeCC-eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFHG-CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~~-~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|+++||++.|++ .++|+||||+|++||++.|+||||||||||||+|++.+.|+.|.+.+++.+. ..-.. .
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl--~~l~~------~ 72 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDL--SRLKG------R 72 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeec--ccccc------c
Confidence 4899999999964 5599999999999999999999999999999999999999999998865332 11111 1
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
+++..|..++.++|.+...++.++.+++. +..++......+.+.++.++|+.+||. +..+..|.+|||||||||+|||
T Consensus 73 ~iP~LRR~IGvVFQD~rLL~~~tvyeNVA-~pL~v~G~~~~~i~~rV~~~L~~VgL~-~k~~~lP~~LSGGEQQRvaIAR 150 (223)
T COG2884 73 EIPFLRRQIGVVFQDFRLLPDRTVYENVA-LPLRVIGKPPREIRRRVSEVLDLVGLK-HKARALPSQLSGGEQQRVAIAR 150 (223)
T ss_pred ccchhhheeeeEeeeccccccchHhhhhh-hhhhccCCCHHHHHHHHHHHHHHhccc-hhhhcCccccCchHHHHHHHHH
Confidence 22344555555566555555555555443 333444566778889999999999997 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh---cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKT---YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~---~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
|++.+|+|||.||||.+|||+....+++.+.+ .|.||||.|||.+.++.+--|++.+++|+++.+.
T Consensus 151 AiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 151 AIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999999998888777654 5789999999999999999999999999998754
No 76
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.5e-42 Score=365.34 Aligned_cols=221 Identities=24% Similarity=0.396 Sum_probs=168.1
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhh
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
+|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+|+|+|+++|++|++.+.+.. +.......+
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~--i~~~~~~~l- 77 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQD--LTTLSNSEL- 77 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--CCcCCHHHH-
Confidence 3899999999952 479999999999999999999999999999999999999999999876532 211100000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
...+..+.+++++...++..+..+++ ............+..+++.++|+.+|+. +..++++.+|||||||||+
T Consensus 78 -----~~~r~~Ig~v~Q~~~l~~~~tv~eni-~~~~~~~~~~~~~~~~~v~e~l~~vgL~-~~~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 78 -----TKARRQIGMIFQHFNLLSSRTVFGNV-ALPLELDNTPKDEIKRKVTELLALVGLG-DKHDSYPSNLSGGQKQRVA 150 (343)
T ss_pred -----HHHhcCEEEEECCccccccCcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHH
Confidence 00011111112221222222233333 2222222334445667889999999997 5789999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|||||+.+|+||||||||++||+.++.+++++|+++ +.|||+||||++.+..+||+|++|++|++++.+...+.+
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999988764 689999999999999999999999999999876554443
No 77
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.5e-42 Score=341.63 Aligned_cols=194 Identities=29% Similarity=0.399 Sum_probs=164.4
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~ 464 (629)
+|+++|+++.|+++...+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 47899999999643234899999999999999999999999999999999999999999998763 1
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
.++|++|+.. +....++.+++... .......+++.++++.+|+.... ++++.+|||||||||+|||||+.+|
T Consensus 81 ~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p 157 (216)
T TIGR00960 81 HIGMVFQDHR--LLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKA-HALPMQLSGGEQQRVAIARAIVHKP 157 (216)
T ss_pred hceEEecCcc--ccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCC
Confidence 4688888753 33456777765421 11112345688899999997654 4577999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 158 PLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999876 56899999999999999999999999974
No 78
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.2e-42 Score=353.40 Aligned_cols=206 Identities=26% Similarity=0.414 Sum_probs=177.7
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFA 467 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~ 467 (629)
.+++++||++.|+. ...+|+||||+|++|+++||+||||||||||+|+|+|++.|++|+|.+.|. ..+|
T Consensus 3 ~~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 3 EVIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred ceeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 35789999999962 235899999999999999999999999999999999999999999999872 2589
Q ss_pred eeccchhcccCCCCCHHHHHhh---cCCC--hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQ---SFPE--VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|.+. +...+|+.+++.. .+.. ....+++.++++.|||.... ++++..||+||||||.||+||+.+|+||
T Consensus 82 y~~~~~~--~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 82 YVPQEPS--LYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-NKKVRTLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred EEccCCC--CCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-CcchhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 9999864 5677898887532 1221 23456899999999998743 5688999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc---C-ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF---E-GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~---~-~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
||||||+|||+.++..+++.|+++ + .|||++||.++++..+||+|++|++|+++ +.|+.+++...
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~-~~g~~~~l~~~ 227 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKII-AEGTPEELKEK 227 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEE-EeCCHHHHHHh
Confidence 999999999999999999999876 3 48999999999999999999999999997 56787776544
No 79
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-42 Score=356.82 Aligned_cols=213 Identities=26% Similarity=0.409 Sum_probs=173.3
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
.++++||++.|+ ++.+|+||||+|++|+++||+||||||||||||+|+|+..|++|++.+.+...... ..
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~--~~------- 74 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE--PA------- 74 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC--HH-------
Confidence 488999999999 69999999999999999999999999999999999999999999998875332110 00
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+.++.+... +.+..+..+++.++..+.........+++.++++.+||.. ..++++++||+||||||.||+
T Consensus 75 ---~~~~~igy~~~~~~-~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 75 ---KVRRRIGYVPQEPS-LYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED-KANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred ---HHHhheEEEccCCC-CCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-hhCcchhhcCHHHHHHHHHHH
Confidence 11111111212211 2334456666666666655443455678999999999985 458889999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---C-CEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---K-RILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~-~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||+.+|+||||||||+||||.++..+++.|+++ + .|||++||.++++..+||+|++|++|++++++..
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~ 221 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTP 221 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCH
Confidence 999999999999999999999999999998765 4 6999999999999999999999999999988743
No 80
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-42 Score=341.47 Aligned_cols=202 Identities=28% Similarity=0.364 Sum_probs=176.0
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~ 466 (629)
+|.++++++.|+.- .+++||||+|+.||.++|.||||||||||||+|+|+..|+.|.|.+++. .++
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~V 79 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKV 79 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcce
Confidence 58899999999643 4799999999999999999999999999999999999999999999875 369
Q ss_pred EeeccchhcccCCCCCHHHHHhhcCC-------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSFP-------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
|+++|+.. +...+|+.+++..+.. ....+.++.++|..+.|++... +++.+|||||||||+|||||+.+|
T Consensus 80 GfvFQ~YA--LF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-ryP~QLSGGQrQRVALARALA~eP 156 (345)
T COG1118 80 GFVFQHYA--LFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-RYPAQLSGGQRQRVALARALAVEP 156 (345)
T ss_pred eEEEechh--hcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-cCchhcChHHHHHHHHHHHhhcCC
Confidence 99999975 5678899998876541 2245677889999999987655 466899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhh----cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAIND----FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~----~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
++||||||+++||..-+..|...|++ ++.|+|+||||.+++.++||||++|++|+|.. .|++++..
T Consensus 157 ~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieq-vg~p~ev~ 226 (345)
T COG1118 157 KVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQ-VGPPDEVY 226 (345)
T ss_pred CeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeee-eCCHHHHh
Confidence 99999999999999988877777654 47899999999999999999999999999964 67776653
No 81
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-42 Score=353.54 Aligned_cols=204 Identities=24% Similarity=0.365 Sum_probs=177.8
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEe
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFAR 468 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~ 468 (629)
..|+++||++.|++. . +++++||+|..||+++|+||||||||||||+|+|+.+|++|+|.+++. ..+++
T Consensus 2 ~~i~l~~v~K~yg~~-~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 2 AELELKNVRKSFGSF-E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred cEEEEeeeEEEcCCc-e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 368999999999642 2 799999999999999999999999999999999999999999999874 46999
Q ss_pred eccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
++|... +.+.+|+.+++.... +....+++++++++.++|++...+ .+.+|||||||||+|||||+++|+++|
T Consensus 80 VFQ~yA--LyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r-~P~~LSGGQrQRVAlaRAlVr~P~v~L 156 (338)
T COG3839 80 VFQNYA--LYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNR-KPLQLSGGQRQRVALARALVRKPKVFL 156 (338)
T ss_pred EeCCcc--ccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhc-CcccCChhhHHHHHHHHHHhcCCCEEE
Confidence 999864 677899999986543 233457789999999999987765 569999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhh----cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAIND----FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~----~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||+|+||...+..+...|++ ++.|+|+||||..++..++|||.+|++|+|.. .|++.+..+
T Consensus 157 ~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q-~g~p~ely~ 223 (338)
T COG3839 157 LDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ-VGTPLELYE 223 (338)
T ss_pred ecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee-cCChHHHhh
Confidence 9999999999988887777665 46799999999999999999999999999975 576666543
No 82
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.5e-42 Score=357.22 Aligned_cols=212 Identities=24% Similarity=0.362 Sum_probs=167.8
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|++..+|+||||+|++|+++||+||||||||||+++|+|++.|++|++.+.+.. +.....
T Consensus 7 ~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~--~~~~~~-------- 76 (306)
T PRK13537 7 PIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEP--VPSRAR-------- 76 (306)
T ss_pred eEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEe--cccchH--------
Confidence 5999999999999899999999999999999999999999999999999999999999886432 111000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..+.+... +.+..+..+++..+..+......+...++.++++.+++. +..++++.+|||||||||+||||
T Consensus 77 --~~~~~ig~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~a 152 (306)
T PRK13537 77 --HARQRVGVVPQFDN-LDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-NKADAKVGELSGGMKRRLTLARA 152 (306)
T ss_pred --HHHhcEEEEeccCc-CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hHhcCchhhCCHHHHHHHHHHHH
Confidence 00111111111111 112223334433333333334444556788999999996 56789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|+.+|++|||||||+|||+.++.++++.|+++ +.|||++||+++++..+||+|++|++|++++.+.
T Consensus 153 L~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~ 221 (306)
T PRK13537 153 LVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGA 221 (306)
T ss_pred HhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999998775 6799999999999999999999999999997754
No 83
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-41 Score=342.08 Aligned_cols=201 Identities=28% Similarity=0.370 Sum_probs=168.9
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------ee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------LR 465 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~~ 465 (629)
|+++|+++.|+. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999953 34899999999999999999999999999999999999999999998762 23
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc---C---CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS---F---PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|++|... +....++.+++... . ......+.+.++++.+|+.... .+++.+|||||||||+|||||+.+|
T Consensus 79 i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~ia~al~~~p 155 (235)
T cd03261 79 MGMLFQSGA--LFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-DLYPAELSGGMKKRVALARALALDP 155 (235)
T ss_pred eEEEccCcc--cCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 778888753 33456887776432 1 1112245678899999997654 5678999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.
T Consensus 156 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 225 (235)
T cd03261 156 ELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIV-AEGTPEELR 225 (235)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEE-EecCHHHHc
Confidence 999999999999999999999999874 568999999999999999999999999997 567776653
No 84
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-42 Score=344.65 Aligned_cols=217 Identities=24% Similarity=0.317 Sum_probs=162.0
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~------ 72 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGED--ISGLSEAEL------ 72 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--ccccChhhH------
Confidence 478999999998899999999999999999999999999999999999999999998775432 111000000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhh-hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRL-DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+..+..+.+....+ +..+..++....... ..........++.++++.+|+. +..++++.+|||||||||+||||
T Consensus 73 ~~~~~~i~~v~q~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 73 YRLRRRMGMLFQSGALF-DSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-GAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred HHHhcceEEEccCcccC-CCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHH
Confidence 00000111111111111 111222222221111 1123334456788899999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
|+.+|+||||||||++||+.++..+++.|+++ +.|||+||||++++..+||+|++|++|++++.+ +.+
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g-~~~ 222 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEG-TPE 222 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEec-CHH
Confidence 99999999999999999999999999988764 679999999999999999999999999998654 443
No 85
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=335.71 Aligned_cols=222 Identities=23% Similarity=0.301 Sum_probs=176.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.+++++|+++||+-.+++||||++++||++|||||||||||||+++|+|.++|+.|.|.+.+. ++.......
T Consensus 4 lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~--~it~l~p~~------ 75 (250)
T COG0411 4 LLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGR--DITGLPPHR------ 75 (250)
T ss_pred eeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCc--ccCCCCHHH------
Confidence 588999999999999999999999999999999999999999999999999999999987543 222211100
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh------hhh---c--cChhhHHHHHHHHHHhCCCCchhhhcccCCCCh
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD------RLD---D--ISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~---~--~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 235 (629)
-.+..+...+|....++..+..++++.... ... . ....+..+++.++|+.+||. +..+++..+||+
T Consensus 76 --iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~-~~a~~~A~~Lsy 152 (250)
T COG0411 76 --IARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLG-ELADRPAGNLSY 152 (250)
T ss_pred --HHhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCc-hhhcchhhcCCh
Confidence 011122223344444445455554433211 000 1 12345678899999999997 678999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
|||+|+.|||||+.+|++||||||.+||.+.....+.+.|+++ +.||++|.||++++..+||||+||+.|++++.|
T Consensus 153 G~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG 232 (250)
T COG0411 153 GQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEG 232 (250)
T ss_pred hHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccC
Confidence 9999999999999999999999999999999999999888765 479999999999999999999999999999887
Q ss_pred CcHHHHHH
Q psy10512 312 GNYEAFCK 319 (629)
Q Consensus 312 g~~~~~~~ 319 (629)
.|.+....
T Consensus 233 ~P~eV~~d 240 (250)
T COG0411 233 TPEEVRNN 240 (250)
T ss_pred CHHHHhcC
Confidence 77665443
No 86
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-42 Score=322.70 Aligned_cols=206 Identities=22% Similarity=0.336 Sum_probs=173.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEEe
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFAR 468 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~~ 468 (629)
||++.+++++|++- ..+++||||++..|+++||.|||||||||+||+|++++.|++|.|.+++- ..+|.
T Consensus 1 Ml~v~~l~K~y~~~-v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 1 MLEVTDLTKSYGSK-VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred CeeeeehhhhccCH-HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcce
Confidence 58999999999763 23799999999999999999999999999999999999999999998762 23444
Q ss_pred eccchhcccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 469 YHQHLHELLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
++-. ..+...+|+.+++.. .......+.++.++.++|++.... ++++..||-||||||+|||||+++|.+||
T Consensus 80 l~~e--~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-~rRv~~~S~G~kqkV~iARAlvh~P~i~v 156 (245)
T COG4555 80 LFGE--RGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-DRRVGEFSTGMKQKVAIARALVHDPSILV 156 (245)
T ss_pred ecCC--cChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-HHHHhhhchhhHHHHHHHHHHhcCCCeEE
Confidence 4422 234456677776532 223334567788999999998765 45789999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETL 609 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 609 (629)
|||||||||+.+...+.+.+.+. +.+||++||++.+++.+||+|+++++|+++ +.|+++...+..
T Consensus 157 lDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv-~~gs~~~l~~r~ 224 (245)
T COG4555 157 LDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVV-LEGSIEALDART 224 (245)
T ss_pred EcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEE-EcCCHHHHHHHH
Confidence 99999999999999999998776 468999999999999999999999999997 689988776544
No 87
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=338.07 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=158.7
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCC--cchhhhhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASD--KSALTCVM 165 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~--~~~~~~~~ 165 (629)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.... ...+.++.
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~~i~~v~ 78 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRD--VTGVPPERRNIGMVF 78 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEE--cCcCchhhccEEEEc
Confidence 468999999998899999999999999999999999999999999999999999998875432 11100 00011111
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
+....+...+..+++ ................++.++++.+|+. +..++++.+|||||||||+|||
T Consensus 79 -------------q~~~~~~~~tv~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~la~ 143 (213)
T cd03259 79 -------------QDYALFPHLTVAENI-AFGLKLRGVPKAEIRARVRELLELVGLE-GLLNRYPHELSGGQQQRVALAR 143 (213)
T ss_pred -------------CchhhccCCcHHHHH-HhHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHHHHH
Confidence 111111111222222 1111111122233455788899999996 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
||+.+|+||||||||++||+.++.++++.|.++ +.|||+||||++++..+||++++|++|+++..
T Consensus 144 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~ 212 (213)
T cd03259 144 ALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQV 212 (213)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEec
Confidence 999999999999999999999999999988764 67999999999999999999999999998754
No 88
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-42 Score=334.08 Aligned_cols=205 Identities=31% Similarity=0.439 Sum_probs=178.4
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------e
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------L 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~ 464 (629)
.+++++++|+++|+. ..+++||||+|.+||+++||||||||||||+++|+|+++|++|+|.+.+. .
T Consensus 2 ~~lL~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~ 79 (250)
T COG0411 2 TPLLEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARL 79 (250)
T ss_pred CceeeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhc
Confidence 367899999999963 45899999999999999999999999999999999999999999999874 3
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcCC-----------------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSFP-----------------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKC 527 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkq 527 (629)
.+++-+|... +...+|+++++..... .....+++.++|+.+||.+.. +.+.++||+|||+
T Consensus 80 Gi~RTFQ~~r--lF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-~~~A~~LsyG~qR 156 (250)
T COG0411 80 GIARTFQITR--LFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-DRPAGNLSYGQQR 156 (250)
T ss_pred cceeeccccc--ccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-cchhhcCChhHhH
Confidence 4667778763 5678899988754210 123456788999999998754 5689999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHH
Q psy10512 528 RVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNIL 603 (629)
Q Consensus 528 rv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 603 (629)
|+.|||||+.+|++||||||.+||.+.....+.+.|.++ +.||++|.||++++..+||||+||+.|+++ .+|+++
T Consensus 157 ~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I-AeG~P~ 235 (250)
T COG0411 157 RLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI-AEGTPE 235 (250)
T ss_pred HHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc-ccCCHH
Confidence 999999999999999999999999999999999998776 368999999999999999999999999997 589998
Q ss_pred HHHH
Q psy10512 604 DYKE 607 (629)
Q Consensus 604 ~~~~ 607 (629)
+..+
T Consensus 236 eV~~ 239 (250)
T COG0411 236 EVRN 239 (250)
T ss_pred HHhc
Confidence 8764
No 89
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-41 Score=355.96 Aligned_cols=206 Identities=24% Similarity=0.359 Sum_probs=175.9
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------ee
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LR 465 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~ 465 (629)
..++|+++||+++|++ ..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|. ..
T Consensus 38 ~~~~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 38 STVAIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred CceeEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 4568999999999963 34899999999999999999999999999999999999999999998863 25
Q ss_pred EEeeccchhcccCCCCCHHHHHhh--cCC---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQ--SFP---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|... +...+++.+++.. ... .....+.+.++++.+|+.... ++++.+|||||||||+||+||+.+|+
T Consensus 116 ig~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 116 IGVVPQFDN--LDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-DARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEEEeCCcc--CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-CCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 889998753 4456788876642 111 112344567889999997644 56789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|||||||+|||+.++..+++.|.++ +.|||++|||++++..+||+|++|++|+++ +.|+++++..
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~ 261 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKI-AEGRPHALID 261 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999999999999999876 568999999999999999999999999997 5788888754
No 90
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=306.60 Aligned_cols=234 Identities=25% Similarity=0.366 Sum_probs=199.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++|+++.||...+|-||+|+.++||.+.|+||+|+|||||+|.|+-++.|.+|+..|.....+....... ..
T Consensus 2 sirv~~in~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~-----k~ 76 (242)
T COG4161 2 SIQLNGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSD-----KA 76 (242)
T ss_pred ceEEcccccccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccH-----HH
Confidence 4899999999999999999999999999999999999999999999999999999999886544333322111 11
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
....|...++++++....+..+..+++.+...+...+..+++..++.++|+.+.+. ++.|+.+-.|||||+|||+||||
T Consensus 77 i~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~-~~adr~plhlsggqqqrvaiara 155 (242)
T COG4161 77 IRDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLK-PYADRYPLHLSGGQQQRVAIARA 155 (242)
T ss_pred HHHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccc-cccccCceecccchhhhHHHHHH
Confidence 22446667778888877777777888877776777788888899999999999996 68999999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHHHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLE 323 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~~~~~ 323 (629)
|+++|++||+||||++|||+-...+.++++++ |.|-++|||..+++..++++++.|++|+|++. |..+.|.....+
T Consensus 156 lmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~-g~a~~ft~p~te 234 (242)
T COG4161 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQ-GDASCFTEPQTE 234 (242)
T ss_pred HhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEee-cchhhccCccHH
Confidence 99999999999999999999998888887766 67999999999999999999999999999976 566777666555
Q ss_pred HHHH
Q psy10512 324 LLEN 327 (629)
Q Consensus 324 ~~~~ 327 (629)
.+.+
T Consensus 235 ~f~~ 238 (242)
T COG4161 235 AFKN 238 (242)
T ss_pred HHHH
Confidence 5443
No 91
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=359.45 Aligned_cols=216 Identities=22% Similarity=0.322 Sum_probs=171.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+++.|++..+|+|+||+|++||+++|+|||||||||||++|+|++.|++|+|.+.+.. +....
T Consensus 6 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~--i~~~~--------- 74 (351)
T PRK11432 6 FVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGED--VTHRS--------- 74 (351)
T ss_pred EEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEE--CCCCC---------
Confidence 5999999999999899999999999999999999999999999999999999999998876432 11100
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..++++...++..+..+++ .+..........+..+++.++++.+|+. .+.++++.+|||||||||+||||
T Consensus 75 --~~~r~ig~vfQ~~~lfp~~tv~eNi-~~~l~~~~~~~~~~~~~v~~~l~~~gl~-~~~~r~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 75 --IQQRDICMVFQSYALFPHMSLGENV-GYGLKMLGVPKEERKQRVKEALELVDLA-GFEDRYVDQISGGQQQRVALARA 150 (351)
T ss_pred --HHHCCEEEEeCCcccCCCCCHHHHH-HHHHhHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHH
Confidence 1111111222222223333333333 2222222334455667899999999997 57899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|+.+|+||||||||++||+.++.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++..+.+.+.|
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999887643 789999999999999999999999999999887665544
No 92
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=360.33 Aligned_cols=216 Identities=20% Similarity=0.286 Sum_probs=169.4
Q ss_pred eEEEEeEEEEe-CCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITF-HGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y-~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|+++|++++| +++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+.+... ....
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i--~~~~-------- 72 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVV--NELE-------- 72 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEEC--CCCC--------
Confidence 48999999999 778899999999999999999999999999999999999999999998765321 1100
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+.+++++...++..+..+++ ............+...++.++++.+|+. ++.++++.+|||||||||+|||
T Consensus 73 ---~~~r~ig~v~Q~~~lfp~~tv~eNi-~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~QRvalAR 147 (356)
T PRK11650 73 ---PADRDIAMVFQNYALYPHMSVRENM-AYGLKIRGMPKAEIEERVAEAARILELE-PLLDRKPRELSGGQRQRVAMGR 147 (356)
T ss_pred ---HHHCCEEEEeCCccccCCCCHHHHH-HhHHhhcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHH
Confidence 0001111122222222222333333 2222222234445567889999999996 6789999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
||+.+|+||||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++..|.+.+.|
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 999999999999999999999999998877643 789999999999999999999999999999887655444
No 93
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.1e-41 Score=357.30 Aligned_cols=213 Identities=24% Similarity=0.376 Sum_probs=166.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|+++.+|+|+||+|++|+++||+||||||||||+++|+|++.|++|++.+++... .....
T Consensus 41 ~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~--~~~~~-------- 110 (340)
T PRK13536 41 AIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPV--PARAR-------- 110 (340)
T ss_pred eEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEEC--CcchH--------
Confidence 59999999999999999999999999999999999999999999999999999999998865421 11000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..+.+... +.+..+..++...+..+..........++.++++.+|+. +..++++.+|||||||||+||+|
T Consensus 111 --~~~~~ig~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~-~~~~~~~~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 111 --LARARIGVVPQFDN-LDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADARVSDLSGGMKRRLTLARA 186 (340)
T ss_pred --HHhccEEEEeCCcc-CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhCCChhhCCHHHHHHHHHHHH
Confidence 00001111111111 111223333333332222233334456678899999997 56789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|+.+|++|||||||+|||+.++.++++.|+++ +.|||++||+++++..+||+|++|++|++++.+.+
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~ 256 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRP 256 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999998775 68999999999999999999999999999987543
No 94
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.2e-41 Score=351.29 Aligned_cols=204 Identities=24% Similarity=0.354 Sum_probs=172.9
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFA 467 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~ 467 (629)
.+|+++||++.|++ ..+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|. ..++
T Consensus 3 ~~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~ 80 (303)
T TIGR01288 3 VAIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIG 80 (303)
T ss_pred cEEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEE
Confidence 57999999999963 34899999999999999999999999999999999999999999998763 3588
Q ss_pred eeccchhcccCCCCCHHHHHhh--c---CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQ--S---FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|... +....|+.+++.. . .......+.+.++++.+++.... ++++.+|||||||||+|||||+.+|++|
T Consensus 81 ~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~ll 157 (303)
T TIGR01288 81 VVPQFDN--LDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-DVRVALLSGGMKRRLTLARALINDPQLL 157 (303)
T ss_pred EEecccc--CCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-cCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9998753 3445788777642 1 11112234567889999997544 4578999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||+|++|++|+++ +.|+++++..
T Consensus 158 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 224 (303)
T TIGR01288 158 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKI-AEGRPHALID 224 (303)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 999999999999999999999876 568999999999999999999999999997 5788777643
No 95
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.2e-41 Score=358.91 Aligned_cols=217 Identities=23% Similarity=0.299 Sum_probs=172.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|++..+|+|+||+|++|++++|+|||||||||||++|+|++.|++|+|.+.+... ...
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~--~~~---------- 71 (353)
T TIGR03265 4 YLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDI--TRL---------- 71 (353)
T ss_pred EEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEEC--CCC----------
Confidence 59999999999998999999999999999999999999999999999999999999998864321 110
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+..+.+++++...++..+..+++ .........+..+...++.++++.+||. ++.++++.+|||||||||+||||
T Consensus 72 -~~~~r~ig~v~Q~~~lfp~~tv~eNi-~~~~~~~~~~~~~~~~~~~~~l~~l~L~-~~~~~~~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 72 -PPQKRDYGIVFQSYALFPNLTVADNI-AYGLKNRGMGRAEVAERVAELLDLVGLP-GSERKYPGQLSGGQQQRVALARA 148 (353)
T ss_pred -CHHHCCEEEEeCCcccCCCCcHHHHH-HHHHHhcCCCHHHHHHHHHHHHHHcCCC-chhhCChhhCCHHHHHHHHHHHH
Confidence 00111111222222223333333333 2222222234455667899999999997 57899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
|+.+|++|||||||++||+.++.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++..+.+.+.|.
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~ 224 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYR 224 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999887653 7899999999999999999999999999998877655543
No 96
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.5e-41 Score=337.84 Aligned_cols=211 Identities=21% Similarity=0.305 Sum_probs=157.6
Q ss_pred eEEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
+|+++|++++|++ +.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +........
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~~--- 75 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQD--LTRLRGREI--- 75 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEe--hhhcChhHH---
Confidence 3789999999964 479999999999999999999999999999999999999999998875422 110000000
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
...+..+..+.+....++..+..++ .................++.++++.+|+. +..++++.+|||||||||+||
T Consensus 76 ---~~~~~~i~~~~q~~~~~~~~tv~e~-l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la 150 (216)
T TIGR00960 76 ---PFLRRHIGMVFQDHRLLSDRTVYDN-VAFPLRIIGVPPRDANERVSAALEKVGLE-GKAHALPMQLSGGEQQRVAIA 150 (216)
T ss_pred ---HHHHHhceEEecCccccccccHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHH
Confidence 0001111111111111111122222 22211111222333456788999999996 567889999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeE
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKL 307 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i 307 (629)
|||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988765 68999999999999999999999999874
No 97
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-41 Score=333.82 Aligned_cols=193 Identities=25% Similarity=0.409 Sum_probs=163.2
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce--------eEEeeccc
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL--------RFARYHQH 472 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~--------~~~~~~q~ 472 (629)
+++|+++.|+++. .+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.. .++|++|+
T Consensus 1 ~~~~l~~~~~~~~-~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~ 79 (205)
T cd03226 1 RIENISFSYKKGT-EILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQD 79 (205)
T ss_pred CcccEEEEeCCcC-ceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecC
Confidence 3689999996423 48999999999999999999999999999999999999999999988742 58899887
Q ss_pred hhcccCCCCCHHHHHhhcCCC-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCC
Q psy10512 473 LHELLDLDISPLDYMLQSFPE-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHL 551 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~L 551 (629)
....+ ...++.+++...... .....++.++++.+|+.+.. ++++.+|||||||||+|||||+.+|++|||||||+||
T Consensus 80 ~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~L 157 (205)
T cd03226 80 VDYQL-FTDSVREELLLGLKELDAGNEQAETVLKDLDLYALK-ERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGL 157 (205)
T ss_pred hhhhh-hhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhc-CCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccC
Confidence 53222 245787776432211 12235688999999998654 5677999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 552 DMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 552 D~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
|+.+++.+.+.|.++ +.+||+||||++++..+||++++|++|+++
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 158 DYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999876 568999999999999999999999999874
No 98
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.5e-39 Score=389.18 Aligned_cols=185 Identities=22% Similarity=0.295 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHc---cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CC
Q psy10512 207 TAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALY---VKPHLLLLDEPTNHLDLDACVWLEEELKTY---KR 280 (629)
Q Consensus 207 ~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~---~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~ 280 (629)
...+++ ++|+.+|+.....++++.+|||||+|||+||+||+ .+|++|||||||++||+.++..|++.|.++ +.
T Consensus 785 ~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~ 863 (1809)
T PRK00635 785 SIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGH 863 (1809)
T ss_pred HHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 344555 58899999632268899999999999999999997 699999999999999999999999988654 68
Q ss_pred EEEEEecCHHHHHhhcceeEEEc------CCeEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCChh
Q psy10512 281 ILVIISHSQDFLNGVCTNIIHLD------KRKLKYYGGNYEAFCKTRLELLENQMKQYNWEQDQIAHMKNYIARFGHGSA 354 (629)
Q Consensus 281 tvIivsHd~~~l~~~~d~ii~l~------~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (629)
|||+|||+++++ .+||++++|. +|+++..+.+ +++..... +.. ..+..+
T Consensus 864 TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp-eel~~~~s---------~t~-----~~l~~~--------- 918 (1809)
T PRK00635 864 TVVIIEHNMHVV-KVADYVLELGPEGGNLGGYLLASCSP-EELIHLHT---------PTA-----KALRPY--------- 918 (1809)
T ss_pred EEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEEEEeCCH-HHHHhccC---------chH-----HHHHHH---------
Confidence 999999999999 7999999996 7888876544 33211000 000 000000
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccCcceEEeccCCCCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEEC
Q psy10512 355 KLARQAQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVG 434 (629)
Q Consensus 355 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG 434 (629)
+... ... .. + .|. . ..+ +...++++.+.. .+ .|+|+||+|++|++++|+|
T Consensus 919 ------------l~~~-----~~~----~~--~-~~~--~-~~~-l~~~~i~i~~~~-~~-~lk~isl~i~~gei~~itG 968 (1809)
T PRK00635 919 ------------LSSP-----QEL----PY--L-PDP--S-PKP-PVPADITIKNAY-QH-NLKHIDLSLPRNALTAVTG 968 (1809)
T ss_pred ------------hhcc-----ccc----cc--c-ccc--c-ccc-cccceEEEeccc-cc-cccceeEEecCCcEEEEEC
Confidence 0000 000 00 0 000 0 011 445667766642 23 6999999999999999999
Q ss_pred CCCCchHHHHHHH
Q psy10512 435 PNGAGKSTLLNLI 447 (629)
Q Consensus 435 ~NGsGKSTLlk~l 447 (629)
+||||||||+..+
T Consensus 969 ~nGsGKStL~~~~ 981 (1809)
T PRK00635 969 PSASGKHSLVFDI 981 (1809)
T ss_pred CCCCChhHHHHHH
Confidence 9999999977655
No 99
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-41 Score=347.32 Aligned_cols=206 Identities=24% Similarity=0.316 Sum_probs=171.6
Q ss_pred eEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------
Q psy10512 399 VIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------- 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------- 464 (629)
||+++||++.|+.+. ..+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 589999999996322 148999999999999999999999999999999999999999999987631
Q ss_pred ----eEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 465 ----RFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 465 ----~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
.++|++|++...+. ..++.+++... .+......++.++++.+||.....++++.+|||||||||+|||+|
T Consensus 81 ~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhcc-cchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 37888887532232 34777766422 111123456788999999964344567899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~ 232 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHII-SCGTPSDVF 232 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHH
Confidence 9999999999999999999999999998765 569999999999999999999999999997 578887764
No 100
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=359.63 Aligned_cols=218 Identities=24% Similarity=0.356 Sum_probs=169.3
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|.|+++|++++|++..+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.+.+... ....
T Consensus 1 ~~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i--~~~~-------- 70 (353)
T PRK10851 1 MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDV--SRLH-------- 70 (353)
T ss_pred CEEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEC--CCCC--------
Confidence 358999999999998999999999999999999999999999999999999999999998764321 1100
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhh----hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRL----DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
..+..+.+++++...++..+..+++ ...... ......+..+++.++++.+|+. ++.++++.+|||||||||
T Consensus 71 ---~~~r~i~~v~Q~~~l~p~~tv~eni-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgGq~QRv 145 (353)
T PRK10851 71 ---ARDRKVGFVFQHYALFRHMTVFDNI-AFGLTVLPRRERPNAAAIKAKVTQLLEMVQLA-HLADRYPAQLSGGQKQRV 145 (353)
T ss_pred ---HHHCCEEEEecCcccCCCCcHHHHH-HhhhhhcccccCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHH
Confidence 0000111112222222222333332 221111 1123344567889999999996 578999999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
+|||||+.+|+||||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++.++.+.+.|
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999998887654 689999999999999999999999999999887665554
Q ss_pred H
Q psy10512 318 C 318 (629)
Q Consensus 318 ~ 318 (629)
.
T Consensus 226 ~ 226 (353)
T PRK10851 226 R 226 (353)
T ss_pred h
Confidence 3
No 101
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.6e-41 Score=352.89 Aligned_cols=213 Identities=23% Similarity=0.339 Sum_probs=164.3
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
++|+++||+++|++..+|+|+||+|++|+++||+|||||||||||++|+|++.|++|++.+.+.. +.... .
T Consensus 3 ~~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~-~------ 73 (303)
T TIGR01288 3 VAIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEP--VPSRA-R------ 73 (303)
T ss_pred cEEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--CcccH-H------
Confidence 36999999999999899999999999999999999999999999999999999999999875432 11000 0
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+..+.+....+ +..+..++...+.............++.++++.+|+. +..++++.+|||||||||+|||
T Consensus 74 ---~~~~~i~~v~q~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-~~~~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 74 ---LARVAIGVVPQFDNLD-PEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-SKADVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred ---HHhhcEEEEeccccCC-cCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCchhhCCHHHHHHHHHHH
Confidence 0001111111111111 1122222222222222223333445678899999996 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+.+|++|||||||++||+.++.++++.|+++ +.|||+||||++++..+||+|++|++|+++..+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 218 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGR 218 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 999999999999999999999999999998765 6899999999999999999999999999987653
No 102
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=352.05 Aligned_cols=231 Identities=22% Similarity=0.329 Sum_probs=168.3
Q ss_pred eEEEEeEEEEeCCe-----eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCc---
Q psy10512 87 DVKIANFSITFHGC-----ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDK--- 158 (629)
Q Consensus 87 ~i~i~nls~~y~~~-----~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~--- 158 (629)
.|+++|++++|++. .+|+|+||+|.+||+++|+||||||||||+++|+|+++|+.|++.+.+..........
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 48999999999753 5999999999999999999999999999999999999999999988643221000000
Q ss_pred -----chhhh-----hhhchHHHHHHHHHHHHH-hccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhh
Q psy10512 159 -----SALTC-----VMEVDEERVRLEKLAEQL-VACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQ 227 (629)
Q Consensus 159 -----~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~ 227 (629)
..+.. .......+..+..+.++. ..+...+..+++ .+.............+++.++++.+||..++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i-~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDI-IFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHH-HhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 00000 000000011111111211 011111222222 211111123444556788999999999656789
Q ss_pred cccCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcC
Q psy10512 228 KKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDK 304 (629)
Q Consensus 228 ~~~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~ 304 (629)
+++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999988654 68999999999999999999999999
Q ss_pred CeEEEEcCcHHHHH
Q psy10512 305 RKLKYYGGNYEAFC 318 (629)
Q Consensus 305 G~i~~~~g~~~~~~ 318 (629)
|++++.+.+++.+.
T Consensus 241 G~i~~~g~~~~~~~ 254 (305)
T PRK13651 241 GKIIKDGDTYDILS 254 (305)
T ss_pred CEEEEECCHHHHhc
Confidence 99998877665543
No 103
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=7.2e-41 Score=352.17 Aligned_cols=209 Identities=16% Similarity=0.248 Sum_probs=175.2
Q ss_pred CCeEEEEEEEEEEcCC-----------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--
Q psy10512 397 PPVIMVQNVSFRYSDD-----------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~-----------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-- 463 (629)
+++|+++||++.|+.. ...+++|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 5789999999999531 235899999999999999999999999999999999999999999998763
Q ss_pred ------------eeEEeeccchhcccCCCCCHHHHHhhc-------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChh
Q psy10512 464 ------------LRFARYHQHLHELLDLDISPLDYMLQS-------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDG 524 (629)
Q Consensus 464 ------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgG 524 (629)
..++|++|+....++...++.+++... .......+.+.++++.+|+.....++++.+||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 248899998643455667887775321 1112234567889999999644445678999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecC
Q psy10512 525 QKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEG 600 (629)
Q Consensus 525 qkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g 600 (629)
|+|||+|||||+.+|+||||||||++||+.++..++++|+++ +.|+|+||||++++..+||+|++|++|+|++ .|
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive-~g 244 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE-LG 244 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-Ec
Confidence 999999999999999999999999999999999999988765 5689999999999999999999999999985 57
Q ss_pred CHHHHH
Q psy10512 601 NILDYK 606 (629)
Q Consensus 601 ~~~~~~ 606 (629)
+.+++.
T Consensus 245 ~~~~i~ 250 (331)
T PRK15079 245 TYDEVY 250 (331)
T ss_pred CHHHHH
Confidence 765543
No 104
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.9e-41 Score=334.10 Aligned_cols=209 Identities=24% Similarity=0.351 Sum_probs=160.5
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+............+.++.
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~-- 78 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVF-- 78 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEe--
Confidence 478999999998899999999999999999999999999999999999999999998875432110000000111111
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
+....+...+..+++ ...........+....++.++++.+|+. +..++++.+||||||||++|||||
T Consensus 79 -----------q~~~~~~~~tv~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~laral 145 (213)
T cd03301 79 -----------QNYALYPHMTVYDNI-AFGLKLRKVPKDEIDERVREVAELLQIE-HLLDRKPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred -----------cChhhccCCCHHHHH-HHHHHhcCCCHHHHHHHHHHHHHHcCCH-HHHhCChhhCCHHHHHHHHHHHHH
Confidence 111111111222222 2111111223344456788899999996 567899999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999988754 689999999999999999999999999998753
No 105
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-41 Score=349.40 Aligned_cols=206 Identities=22% Similarity=0.300 Sum_probs=170.8
Q ss_pred eEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 399 VIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
+|+++||++.|+... ..+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 489999999996432 13899999999999999999999999999999999999999999988531
Q ss_pred -----------------------eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccc
Q psy10512 464 -----------------------LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQV 515 (629)
Q Consensus 464 -----------------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~ 515 (629)
..++|++|.+...+. ..++.+++... .+.....+++.++++.+||.....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLF-EQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccc-cccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 136899987532332 35777776422 1111234568899999999643445
Q ss_pred cCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeC
Q psy10512 516 CPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICEN 592 (629)
Q Consensus 516 ~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~ 592 (629)
+++.+|||||||||+||++|+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 678999999999999999999999999999999999999999999998765 56999999999999999999999999
Q ss_pred CEEEEecCCHHHHH
Q psy10512 593 GKVTKWEGNILDYK 606 (629)
Q Consensus 593 G~i~~~~g~~~~~~ 606 (629)
|+++ ..|+++++.
T Consensus 241 G~i~-~~g~~~~~~ 253 (305)
T PRK13651 241 GKII-KDGDTYDIL 253 (305)
T ss_pred CEEE-EECCHHHHh
Confidence 9997 467776653
No 106
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-41 Score=350.97 Aligned_cols=209 Identities=21% Similarity=0.299 Sum_probs=174.8
Q ss_pred CCeEEEEEEEEEEcCC--------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----
Q psy10512 397 PPVIMVQNVSFRYSDD--------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~--------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----- 463 (629)
+++|+++||++.|+.. ...+|+||||+|.+||++||+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~ 82 (327)
T PRK11308 3 QPLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKA 82 (327)
T ss_pred CceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcC
Confidence 4689999999999521 235899999999999999999999999999999999999999999998762
Q ss_pred ---------eeEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHH
Q psy10512 464 ---------LRFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCR 528 (629)
Q Consensus 464 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqr 528 (629)
..++|++|+....++..+++.+.+.. ........+++.++|+.+||.....++++.+|||||+||
T Consensus 83 ~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QR 162 (327)
T PRK11308 83 DPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQR 162 (327)
T ss_pred CHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHH
Confidence 24889999875456666676655431 112222345788999999996434456789999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 529 VVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 529 v~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
|+|||||+.+|+||||||||++||+.++..++++|.++ +.|||+||||+.++..+||+|++|++|+|++ .|+.++
T Consensus 163 v~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive-~g~~~~ 241 (327)
T PRK11308 163 IAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVE-KGTKEQ 241 (327)
T ss_pred HHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999999999999999998764 5699999999999999999999999999985 576655
Q ss_pred HH
Q psy10512 605 YK 606 (629)
Q Consensus 605 ~~ 606 (629)
+.
T Consensus 242 ~~ 243 (327)
T PRK11308 242 IF 243 (327)
T ss_pred Hh
Confidence 43
No 107
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-41 Score=334.77 Aligned_cols=199 Identities=26% Similarity=0.398 Sum_probs=167.4
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEEee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFARY 469 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~~~ 469 (629)
|+++|+++.|++ . .+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 i~~~~~~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 78 (220)
T cd03265 1 IEVENLVKKYGD-F-EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIV 78 (220)
T ss_pred CEEEEEEEEECC-E-EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEe
Confidence 578999999963 3 4899999999999999999999999999999999999999999998763 247888
Q ss_pred ccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|... +....++.+++... .......+.+.++++.+|+... .++++.+|||||||||+||+||+.+|++|||
T Consensus 79 ~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qr~~la~al~~~p~llll 155 (220)
T cd03265 79 FQDLS--VDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEA-ADRLVKTYSGGMRRRLEIARSLVHRPEVLFL 155 (220)
T ss_pred cCCcc--ccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-hhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88753 34456777765321 1111234567899999999754 4567899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
||||++||+.+++.+.+.|.++ +.+||+||||++++..+||++++|++|+++. .|+.++
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~ 218 (220)
T cd03265 156 DEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIA-EGTPEE 218 (220)
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-eCChHH
Confidence 9999999999999999998764 5689999999999999999999999999974 566543
No 108
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-41 Score=333.30 Aligned_cols=193 Identities=26% Similarity=0.395 Sum_probs=164.0
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|+++|+++.|++ ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~ 78 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVF 78 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEc
Confidence 478999999953 34899999999999999999999999999999999999999999998763 2478888
Q ss_pred cchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|... +....++.+++.... ......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++||||
T Consensus 79 q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~la~al~~~p~~lllD 155 (213)
T cd03259 79 QDYA--LFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-NRYPHELSGGQQQRVALARALAREPSLLLLD 155 (213)
T ss_pred Cchh--hccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8754 334567777664211 1112345678899999997544 4577999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||+|||+.++..+.+.|.++ +.+||++|||++++..+||++++|++|+++.
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 156 EPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999999999875 5689999999999999999999999999863
No 109
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-41 Score=354.33 Aligned_cols=204 Identities=24% Similarity=0.357 Sum_probs=172.0
Q ss_pred eEEEEEEEEEEcC--CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSD--DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~--~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
||+++||+++|+. ....+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 5899999999962 1235899999999999999999999999999999999999999999998762
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
..++|++|+.. +....++.+++... .+.....+++.++++.+||.+.. ++++.+|||||||||+|||||+.
T Consensus 81 ~~~ig~v~q~~~--l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGq~qRv~lAraL~~ 157 (343)
T PRK11153 81 RRQIGMIFQHFN--LLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKA-DRYPAQLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEeCCCc--cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHHc
Confidence 24888888753 44456887776422 11112345678899999997644 46779999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ +.|+.+++.
T Consensus 158 ~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~-~~g~~~~~~ 229 (343)
T PRK11153 158 NPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLV-EQGTVSEVF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999999999999999999875 468999999999999999999999999997 467766653
No 110
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=355.63 Aligned_cols=204 Identities=23% Similarity=0.287 Sum_probs=174.8
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARY 469 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~ 469 (629)
+|+++|+++.|+.+ ..+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v 81 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMV 81 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 68999999999322 34899999999999999999999999999999999999999999999873 358999
Q ss_pred ccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|+.. +...+|+.+++.... +.....+++.++++.+||.+.. ++++.+|||||||||+|||||+.+|++|||
T Consensus 82 ~Q~~~--lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGq~QRvalARAL~~~P~llLL 158 (356)
T PRK11650 82 FQNYA--LYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLL-DRKPRELSGGQRQRVAMGRAIVREPAVFLF 158 (356)
T ss_pred eCCcc--ccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99863 556788888875432 1112345688999999998654 567799999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||++||+.+++.+.+.|+++ +.|+|+||||++++..+||+|++|++|+++ ..|+++++.+
T Consensus 159 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~-~~g~~~~~~~ 224 (356)
T PRK11650 159 DEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAE-QIGTPVEVYE 224 (356)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE-EECCHHHHHh
Confidence 9999999999999999888754 568999999999999999999999999997 4688776543
No 111
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-41 Score=339.35 Aligned_cols=212 Identities=25% Similarity=0.331 Sum_probs=161.1
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+............+.++.
T Consensus 1 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 80 (239)
T cd03296 1 MSIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVF 80 (239)
T ss_pred CEEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEe
Confidence 35899999999999899999999999999999999999999999999999999999998876432110000000011111
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc----ChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI----SADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
+....++..+..+++ ......... ......+++.++++.+|+. +..++++.+|||||||||
T Consensus 81 -------------q~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl 145 (239)
T cd03296 81 -------------QHYALFRHMTVFDNV-AFGLRVKPRSERPPEAEIRAKVHELLKLVQLD-WLADRYPAQLSGGQRQRV 145 (239)
T ss_pred -------------cCCcccCCCCHHHHH-hhhhhhccccccCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHH
Confidence 110111111222222 111111111 2223345678899999996 567889999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 146 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 220 (239)
T cd03296 146 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGT 220 (239)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecC
Confidence 9999999999999999999999999999999988764 6799999999999999999999999999987653
No 112
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=353.64 Aligned_cols=204 Identities=23% Similarity=0.361 Sum_probs=176.2
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEE
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFA 467 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~ 467 (629)
.++|+++||++.|+. ..+|+++||+|.+||+++|+|||||||||||++|+|+++|++|+|.+++. ..++
T Consensus 4 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 4 KNFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred CcEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 358999999999963 34899999999999999999999999999999999999999999999873 4689
Q ss_pred eeccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|+.. +...+|+.+++.... +.....+++.++++.+|+.+.. ++++.+|||||||||+|||||+.+|++|
T Consensus 82 ~vfQ~~~--lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~-~r~~~~LSgGq~QRVaLARaL~~~P~lL 158 (351)
T PRK11432 82 MVFQSYA--LFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFE-DRYVDQISGGQQQRVALARALILKPKVL 158 (351)
T ss_pred EEeCCcc--cCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 9999863 456678888875432 1223356788999999998654 5577999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||||++||+.++..+.+.|+++ +.|+|+||||.+++..+||+|++|++|+|+. .|+++++.
T Consensus 159 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~-~g~~~~~~ 225 (351)
T PRK11432 159 LFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQ-IGSPQELY 225 (351)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 999999999999999999888754 5799999999999999999999999999974 68877654
No 113
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-41 Score=335.60 Aligned_cols=210 Identities=23% Similarity=0.375 Sum_probs=160.6
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|++.+.+.. +.... ..
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~--~~~~~-~~------- 70 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHD--VVREP-RE------- 70 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEe--cCcCh-HH-------
Confidence 578999999999899999999999999999999999999999999999999999998875422 11100 00
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
.+..+..+.+....+ +..+..+..................++.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 71 --~~~~i~~~~q~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 71 --VRRRIGIVFQDLSVD-DELTGWENLYIHARLYGVPGAERRERIDELLDFVGLL-EAADRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred --HhhcEEEecCCcccc-ccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhCCHHHHHHHHHHHHH
Confidence 000011111111111 1112222222211111222333456788999999996 567899999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++..+
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 214 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEG 214 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeC
Confidence 9999999999999999999999999988653 679999999999999999999999999998764
No 114
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=343.24 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=171.7
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRF 466 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~ 466 (629)
++|+++|+++.|+.+. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 3 ~~l~~~~l~~~~~~~~-~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 3 NIIEVEDLHFRYKDGT-KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred ceEEEEEEEEEeCCCC-eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4799999999995333 4899999999999999999999999999999999999999999998873 247
Q ss_pred EeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|++|.+...+ ...++.+++... .......+++.++++.+|+.+. .++++.+|||||+|||+|||||+.+|++
T Consensus 82 ~~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-~~~~~~~LSgG~~qrv~laraL~~~p~l 159 (274)
T PRK13647 82 GLVFQDPDDQV-FSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDF-RDKPPYHLSYGQKKRVAIAGVLAMDPDV 159 (274)
T ss_pred EEEecChhhhh-ccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-hcCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 89998753222 345777776432 1111234567889999999754 4567899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||||||++||+.++..+.+.|.++ +.|||++|||++++..+||+|++|++|+++ ..|+++.+
T Consensus 160 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 225 (274)
T PRK13647 160 IVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVL-AEGDKSLL 225 (274)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHh
Confidence 9999999999999999999999776 569999999999999999999999999997 46776554
No 115
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=356.90 Aligned_cols=203 Identities=29% Similarity=0.426 Sum_probs=174.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRF 466 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~ 466 (629)
++|+++||+++|++ ..+|+++||+|++||+++|+||||||||||||+|+|+++|++|+|.+++. ..+
T Consensus 2 ~~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 2 PMIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred ceEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 47999999999963 34899999999999999999999999999999999999999999998863 247
Q ss_pred EeeccchhcccCCCCCHHHHHhhcC-------C--ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSF-------P--EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
+|++|... +.+.+++.+++.... . .....+.+.++++.+|+.+. .++++.+|||||||||+|||||++
T Consensus 80 g~v~q~~~--l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~-~~~~~~~LSgGerQRv~IArAL~~ 156 (402)
T PRK09536 80 ASVPQDTS--LSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQF-ADRPVTSLSGGERQRVLLARALAQ 156 (402)
T ss_pred EEEccCCC--CCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchh-hcCChhhCCHHHHHHHHHHHHHHc
Confidence 88888753 445678887764321 1 12345678899999999754 456889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|++|||||||+|||+.++..++++|+++ +.|||++|||++++.++|||+++|++|+++ ..|+++++.
T Consensus 157 ~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv-~~G~~~ev~ 227 (402)
T PRK09536 157 ATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVR-AAGPPADVL 227 (402)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 99999999999999999999999998876 468999999999999999999999999997 478887753
No 116
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.9e-41 Score=356.87 Aligned_cols=218 Identities=25% Similarity=0.340 Sum_probs=171.4
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
..|+++|++++|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|+.|+|.+.+... ...
T Consensus 13 ~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i--~~~--------- 81 (375)
T PRK09452 13 PLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDI--THV--------- 81 (375)
T ss_pred ceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEEC--CCC---------
Confidence 359999999999998999999999999999999999999999999999999999999998765321 110
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
...+..+.++++....++..+..+++ .+..........+...++.++++.+||. ++.++++.+|||||||||+|||
T Consensus 82 --~~~~r~ig~vfQ~~~lfp~ltv~eNi-~~~l~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~p~~LSgGq~QRVaLAR 157 (375)
T PRK09452 82 --PAENRHVNTVFQSYALFPHMTVFENV-AFGLRMQKTPAAEITPRVMEALRMVQLE-EFAQRKPHQLSGGQQQRVAIAR 157 (375)
T ss_pred --CHHHCCEEEEecCcccCCCCCHHHHH-HHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHHHHH
Confidence 00111111222222223333333333 2221222233444566789999999997 6789999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
||+.+|+||||||||++||+..+.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++..+.+.+.|.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~ 234 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYE 234 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999887653 7899999999999999999999999999998876655544
No 117
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=344.39 Aligned_cols=206 Identities=24% Similarity=0.337 Sum_probs=171.2
Q ss_pred eEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 399 VIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
.|+++||++.|+... ..+|+||||+|.+||++||+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 389999999996421 24899999999999999999999999999999999999999999988762
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCC-cccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTG-RQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..++|++|.+...+ +..++.+++... .......+.+.++++.+||.. ...++++.+|||||||||+|||||+
T Consensus 82 ~~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 82 RKKVGLVFQYPEYQL-FEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred hhceEEEecCchhcc-ccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 24789998753222 345777776421 111123456788999999962 2345678999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||||++|++|+++ ..|+.+++.
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~ 233 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCE-LQGTPREVF 233 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHH
Confidence 999999999999999999999999999765 468999999999999999999999999997 478777754
No 118
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-41 Score=357.72 Aligned_cols=216 Identities=22% Similarity=0.314 Sum_probs=167.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|++.|++|+|.+.+... .....
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i--~~~~~-------- 72 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRM--NDVPP-------- 72 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEEC--CCCCH--------
Confidence 48999999999998999999999999999999999999999999999999999999988754321 11000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+..+.++.+....++..+..+++ .+..........+...++.++++.+||. +..++++.+|||||||||+||||
T Consensus 73 ---~~~~i~~v~Q~~~l~~~~tv~eni-~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~~~~~~LSgGq~QRvaLAra 147 (369)
T PRK11000 73 ---AERGVGMVFQSYALYPHLSVAENM-SFGLKLAGAKKEEINQRVNQVAEVLQLA-HLLDRKPKALSGGQRQRVAIGRT 147 (369)
T ss_pred ---hHCCEEEEeCCcccCCCCCHHHHH-HhHHhhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHH
Confidence 000011111111112222222332 2221222233344556889999999996 57899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|+.+|+||||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++..+.+.+.|
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999998887654 689999999999999999999999999999876554433
No 119
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=345.42 Aligned_cols=204 Identities=25% Similarity=0.317 Sum_probs=170.4
Q ss_pred EEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 400 IMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 400 l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
|+++||+++|+... ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 24899999999999999999999999999999999999999999998773
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..++|++|++...+. ..++.+++... .......+.+.++++.+||.....++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 147899987532232 35777766422 1111223567889999999744445678999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||||++|++|+++ +.|++.++
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~ 233 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVF-LQGTPREI 233 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 999999999999999999999999998765 568999999999999999999999999997 57877665
No 120
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.2e-40 Score=337.32 Aligned_cols=202 Identities=28% Similarity=0.396 Sum_probs=169.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~ 464 (629)
+|+++||++.|+.+. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~~-~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 1 MLEVENLSKVYPNGK-QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred CeEEEeeeeecCCCc-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 478999999996223 4899999999999999999999999999999999999999999998763 1
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcC-------------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSF-------------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 531 (629)
.++|++|... +....++.+++.... ......+++.++++.+|+.... ++++.+|||||||||+|
T Consensus 80 ~i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~l 156 (243)
T TIGR02315 80 RIGMIFQHYN--LIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-YQRADQLSGGQQQRVAI 156 (243)
T ss_pred heEEEcCCCc--ccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHH
Confidence 3788888753 334567777664211 0112345678899999997543 45779999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+++++
T Consensus 157 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 233 (243)
T TIGR02315 157 ARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIV-FDGAPSEL 233 (243)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-ecCCHHHh
Confidence 99999999999999999999999999999998775 468999999999999999999999999997 56777665
No 121
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.7e-41 Score=355.71 Aligned_cols=216 Identities=23% Similarity=0.346 Sum_probs=169.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCC--CceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVP--DHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~--g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
.|+++||+++|++..+|+|+||+|++|++++|+|||||||||||++|+|++.|++ |++.+.+.. +....
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~--~~~~~------- 75 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRD--LTHAP------- 75 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEE--CCCCC-------
Confidence 4899999999999899999999999999999999999999999999999999999 998876432 11100
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
..+..+..++++...++..+ ..++..+..............++.++++.+||. ++.++++.+|||||||||+||
T Consensus 76 ----~~~r~ig~vfQ~~~l~p~~t-v~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~-~~~~~~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 76 ----PHKRGLALLFQNYALFPHLK-VEDNVAFGLRAQKMPKADIAERVADALKLVGLG-DAAAHLPAQLSGGMQQRIAIA 149 (362)
T ss_pred ----HHHCCEEEEECCcccCCCCc-HHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCC-chhhCChhhCCHHHHHHHHHH
Confidence 00111111222222222223 333333222222334445567899999999997 578999999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc-----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY-----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~-----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|||+.+|+||||||||++||+..+.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++..+.+.+.|
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999877643 679999999999999999999999999999887665544
No 122
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.6e-40 Score=341.31 Aligned_cols=205 Identities=25% Similarity=0.351 Sum_probs=171.7
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
.++|+++||++.|+. ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 5 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 5 ANLVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred cceEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 468999999999953 34899999999999999999999999999999999999999999998762
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc---C---CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS---F---PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..++|++|... +....++.+++... . ........+.++++.+|+.... ++++.+|||||||||+|||||+
T Consensus 83 ~~~i~~v~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 83 RKRMSMLFQSGA--LFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-KLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred hhcEEEEecccc--cCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHh
Confidence 13778888753 33456777766421 1 1111234567889999997544 5578999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+.+++.+
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 233 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIV-AHGSAQALQA 233 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEE-EeCCHHHHhc
Confidence 999999999999999999999999998875 468999999999999999999999999997 4687776643
No 123
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=344.40 Aligned_cols=206 Identities=26% Similarity=0.336 Sum_probs=170.7
Q ss_pred eEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------
Q psy10512 399 VIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------- 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------- 464 (629)
+|+++||++.|++.. ..+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 588999999996321 248999999999999999999999999999999999999999999987731
Q ss_pred ----eEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 465 ----RFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 465 ----~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
.++|++|.+...+. ..++.+++... .......+.+.++++.+|+......+++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 36888887532222 35777776421 111123456788999999963334568899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 233 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLI-KHASPKEIF 233 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999999999876 468999999999999999999999999997 467776654
No 124
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=336.07 Aligned_cols=201 Identities=28% Similarity=0.342 Sum_probs=169.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARY 469 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~ 469 (629)
+|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 4899999999964 34899999999999999999999999999999999999999999998763 247888
Q ss_pred ccchhcccCCCCCHHHHHhhcC---C-----C-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 470 HQHLHELLDLDISPLDYMLQSF---P-----E-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~---~-----~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+|.+. +....++.+++.... . . ....+.+.++++.+|+.... ++++.+|||||+|||+|||||+.+|+
T Consensus 80 ~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~ 156 (239)
T cd03296 80 FQHYA--LFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-DRYPAQLSGGQRQRVALARALAVEPK 156 (239)
T ss_pred ecCCc--ccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 88753 334567777664221 0 1 11234577899999997543 45779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 224 (239)
T cd03296 157 VLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIE-QVGTPDEV 224 (239)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHH
Confidence 99999999999999999999999875 468999999999999999999999999997 46776655
No 125
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=347.83 Aligned_cols=208 Identities=20% Similarity=0.284 Sum_probs=171.5
Q ss_pred CCCeEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------
Q psy10512 396 PPPVIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------- 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------- 463 (629)
..++|+++|++|.|+... ..+|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 457899999999996421 24899999999999999999999999999999999999999999998751
Q ss_pred ------------------eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCc
Q psy10512 464 ------------------LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQ 520 (629)
Q Consensus 464 ------------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~ 520 (629)
..++|++|.....+. ..++.+++... .......+++.++++.+||......+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~ 176 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF-KDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFG 176 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccc-cchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCccc
Confidence 136788887532232 34777766422 111123356788999999963334557799
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 521 LSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 521 LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++
T Consensus 177 LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~- 255 (320)
T PRK13631 177 LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL- 255 (320)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-
Confidence 9999999999999999999999999999999999999999998765 569999999999999999999999999997
Q ss_pred ecCCHHHH
Q psy10512 598 WEGNILDY 605 (629)
Q Consensus 598 ~~g~~~~~ 605 (629)
..|+.+++
T Consensus 256 ~~g~~~~~ 263 (320)
T PRK13631 256 KTGTPYEI 263 (320)
T ss_pred EeCCHHHH
Confidence 46887765
No 126
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=338.09 Aligned_cols=195 Identities=30% Similarity=0.338 Sum_probs=167.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------eeEEeec
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------LRFARYH 470 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------~~~~~~~ 470 (629)
.++|+++||++.|+. . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 10 ~~~l~i~~l~~~~~~-~-~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 10 GTPLLLNAVSKRYGE-R-TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CCcEEEEEEEEEECC-c-ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 467999999999963 3 4899999999999999999999999999999999999999999998763 2578988
Q ss_pred cchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q psy10512 471 QHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNH 550 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~ 550 (629)
|... +....++.+++...... .....+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||+|
T Consensus 88 q~~~--l~~~~tv~enl~~~~~~-~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~ 163 (257)
T PRK11247 88 QDAR--LLPWKKVIDNVGLGLKG-QWRDAALQALAAVGLADRA-NEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGA 163 (257)
T ss_pred cCcc--CCCCCcHHHHHHhcccc-hHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 8753 33446888876543322 2345678899999997644 457799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 551 LDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 551 LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 164 LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 164 LDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999998764 5689999999999999999999999999974
No 127
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=335.91 Aligned_cols=202 Identities=27% Similarity=0.394 Sum_probs=168.6
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------ee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------LR 465 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~~ 465 (629)
|+++||++.|+++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4689999999632 34899999999999999999999999999999999999999999998762 13
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC-------------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHH
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF-------------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 532 (629)
++|++|... +....++.+++.... ......+.+.++++.+|+... ..+++.+|||||||||+||
T Consensus 80 i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 80 IGMIFQQFN--LIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDK-AYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred cEEEcccCc--ccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhh-hCCCcccCCHHHHHHHHHH
Confidence 678887653 334567777664211 111234567889999999754 3457799999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV-FDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eecCHHHhh
Confidence 9999999999999999999999999999998775 468999999999999999999999999997 467776653
No 128
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-41 Score=346.97 Aligned_cols=220 Identities=23% Similarity=0.329 Sum_probs=164.9
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||++.|++ +++|+||||+|.+||++||+||||||||||+++|+|+++|+.|+|.+.+... ........
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~--~~~~~~~~ 79 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDI--TDKKVKLS 79 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEEC--CCcCccHH
Confidence 4899999999974 4699999999999999999999999999999999999999999998765321 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc-hhhhcccCCCChHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK-EMQQKKTKDFSGGWRM 239 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-~~~~~~~~~LSGGqrq 239 (629)
..+..+..+.++.. .....+..+++ ........+...+...++.++++.+||.. +..++++.+|||||||
T Consensus 80 -------~~~~~ig~v~q~~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 80 -------DIRKKVGLVFQYPEYQLFEETIEKDI-AFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKR 151 (287)
T ss_pred -------HHhhceEEEecCchhccccccHHHHH-HhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHH
Confidence 00001111111100 01111222222 22111122344455667899999999962 4678999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
||+|||||+.+|+||||||||++||+.++.+|.+.|+++ +.|||+||||++++..+||+|++|++|++++.+.+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999988654 6799999999999999999999999999998765544
Q ss_pred H
Q psy10512 316 A 316 (629)
Q Consensus 316 ~ 316 (629)
.
T Consensus 232 ~ 232 (287)
T PRK13637 232 V 232 (287)
T ss_pred H
Confidence 3
No 129
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=379.00 Aligned_cols=205 Identities=26% Similarity=0.430 Sum_probs=173.3
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccC
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLD 478 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 478 (629)
+|.++||+++|+. ..+|+|+||+|.+|+++||+||||||||||||+|+|+++|++|+|.+++...++|++|....
T Consensus 1 ~i~i~nls~~~g~--~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~--- 75 (638)
T PRK10636 1 MIVFSSLQIRRGV--RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPA--- 75 (638)
T ss_pred CEEEEEEEEEeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCC---
Confidence 5889999999963 34899999999999999999999999999999999999999999999887778888875321
Q ss_pred CCCCHHHHHhh--------------------------------cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHH
Q psy10512 479 LDISPLDYMLQ--------------------------------SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQK 526 (629)
Q Consensus 479 ~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqk 526 (629)
...+...++.. .........++..+|..+||.....++++.+||||||
T Consensus 76 ~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGer 155 (638)
T PRK10636 76 LPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWR 155 (638)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHH
Confidence 11222222110 0001112356788999999974344678899999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 527 CRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 527 qrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+||++|+.+|+||||||||||||+.++.+|.+.|.++++|||+||||++++..+||+|++|++|++..|.|+|..|.
T Consensus 156 qRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~ 235 (638)
T PRK10636 156 MRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSFE 235 (638)
T ss_pred HHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999987
Q ss_pred HH
Q psy10512 607 ET 608 (629)
Q Consensus 607 ~~ 608 (629)
+.
T Consensus 236 ~~ 237 (638)
T PRK10636 236 VQ 237 (638)
T ss_pred HH
Confidence 53
No 130
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.2e-41 Score=331.70 Aligned_cols=192 Identities=31% Similarity=0.445 Sum_probs=162.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~ 464 (629)
+|+++|+++.|+.+. .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~~-~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 1 MIEFHNVSKAYPGGV-AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred CEEEEeeeEEeCCCc-eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 478999999995233 4899999999999999999999999999999999999999999988763 1
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
.++|++|... +....++.+++... .......+.+.++++.+|+.... ++++.+|||||+|||+|||||+.+|
T Consensus 80 ~i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p 156 (214)
T TIGR02673 80 RIGVVFQDFR--LLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKA-DAFPEQLSGGEQQRVAIARAIVNSP 156 (214)
T ss_pred heEEEecChh--hccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhCCC
Confidence 4678888753 33456777765432 11112345678999999997543 4577999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCE
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGK 594 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~ 594 (629)
++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+
T Consensus 157 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 157 PLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999875 5689999999999999999999999884
No 131
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.1e-40 Score=339.88 Aligned_cols=207 Identities=22% Similarity=0.360 Sum_probs=171.9
Q ss_pred eEEEEEEEEEEcCC-------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------
Q psy10512 399 VIMVQNVSFRYSDD-------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~-------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------- 463 (629)
+|+++||++.|+.. ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 68999999999531 235899999999999999999999999999999999999999999998762
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHH
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|.....+....++.+++.. .+......+.+.++++.+|+.....++++.+|||||+|||+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 14788888753234445677776531 111112345678899999996333456789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 239 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVAQLL 239 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHHHHc
Confidence 99999999999999999999999999999998765 568999999999999999999999999997 468776664
No 132
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.4e-41 Score=335.00 Aligned_cols=209 Identities=25% Similarity=0.405 Sum_probs=161.1
Q ss_pred EEEEeEEEEeCCe----eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHGC----ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~~----~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++|++++|++. ++|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +... ..
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~-~~---- 74 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFD--VVKE-PA---- 74 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEE--cccC-HH----
Confidence 7899999999876 79999999999999999999999999999999999999999999875432 1100 00
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
..+..+....+... ..+..+..++.................++.++++.+|+. +..++++.+|||||||||+|
T Consensus 75 -----~~~~~i~~~~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~l 147 (218)
T cd03266 75 -----EARRRLGFVSDSTG-LYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-ELLDRRVGGFSTGMRQKVAI 147 (218)
T ss_pred -----HHHhhEEEecCCcc-cCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhhhhhhcCHHHHHHHHH
Confidence 00001111111111 111112222222222222223334556788999999996 56789999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..
T Consensus 148 aral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~ 217 (218)
T cd03266 148 ARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYE 217 (218)
T ss_pred HHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeec
Confidence 99999999999999999999999999999988765 67999999999999999999999999999754
No 133
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=332.66 Aligned_cols=197 Identities=27% Similarity=0.405 Sum_probs=165.4
Q ss_pred CCeEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------
Q psy10512 397 PPVIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------- 463 (629)
+++|+++||++.|+.+. ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 3 KILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred CceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 46899999999996422 34899999999999999999999999999999999999999999998762
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYL 534 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 534 (629)
..++|++|... +....++.+++... .......+++.++++.+|+.+.. .+++.+|||||||||+||||
T Consensus 83 ~~~~~~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 83 ELRNQKLGFIYQFHH--LLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRA-NHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HHHhccEEEEecCcc--cCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHH
Confidence 24788888753 34456787765421 11122345678999999997544 45679999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 535 AWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 535 l~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|+.+|++|||||||+|||+.+++.+.+.|.++ +.|||+||||++++..+ |++++|++|+++.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~ 225 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTA 225 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEE
Confidence 99999999999999999999999999999765 46899999999999875 6999999999974
No 134
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.9e-40 Score=351.62 Aligned_cols=204 Identities=24% Similarity=0.358 Sum_probs=175.6
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEe
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFAR 468 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~ 468 (629)
++|+++||+++|+. ..+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|
T Consensus 3 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 3 PYLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred cEEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 47999999999963 34899999999999999999999999999999999999999999999873 35889
Q ss_pred eccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
++|+.. +...+|+.+++.... +......++.++++.+||.+.. ++++.+|||||||||+|||||+.+|++||
T Consensus 81 v~Q~~~--lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-~~~~~~LSgGq~QRvaLARaL~~~P~llL 157 (353)
T TIGR03265 81 VFQSYA--LFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-RKYPGQLSGGQQQRVALARALATSPGLLL 157 (353)
T ss_pred EeCCcc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-hCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999853 455678888875332 1123356788999999998654 45779999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||++||+.++..+.+.|+++ +.|+|+||||.+++..+||+|++|++|+++ ..|+++++.+
T Consensus 158 LDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~-~~g~~~~~~~ 224 (353)
T TIGR03265 158 LDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIE-QVGTPQEIYR 224 (353)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999999999888764 579999999999999999999999999997 4677766543
No 135
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.8e-40 Score=340.58 Aligned_cols=209 Identities=20% Similarity=0.303 Sum_probs=170.7
Q ss_pred CeEEEEEEEEEEcCC-------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------
Q psy10512 398 PVIMVQNVSFRYSDD-------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~-------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------- 463 (629)
++|+++||+++|+.. ...+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 579999999999521 134899999999999999999999999999999999999999999998762
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAY 533 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 533 (629)
..++|++|+....+....++.+++.. ........+.+.++++.+|+.......++.+|||||+|||+|||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 24788888753223344455554421 11111234567889999999533345577999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 534 LAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 534 al~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||+.+|+||||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+++++..
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 239 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADVLA 239 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHHhc
Confidence 999999999999999999999999999998875 568999999999999999999999999997 5787776643
No 136
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.5e-40 Score=345.00 Aligned_cols=203 Identities=25% Similarity=0.387 Sum_probs=175.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEEe
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFAR 468 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~~ 468 (629)
+++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|. ..++|
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~ 79 (301)
T TIGR03522 2 SIRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEE
Confidence 4899999999963 35899999999999999999999999999999999999999999998773 24889
Q ss_pred eccchhcccCCCCCHHHHHhh---c--CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 469 YHQHLHELLDLDISPLDYMLQ---S--FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
++|... +....++.+++.. . .+.....+++.++++.||+.... ++++..|||||||||+||+||+.+|++||
T Consensus 80 ~~q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~la~al~~~p~lli 156 (301)
T TIGR03522 80 LPEHNP--LYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-HKKIGQLSKGYRQRVGLAQALIHDPKVLI 156 (301)
T ss_pred ecCCCC--CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-cCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 988753 4556788887642 1 12222345688899999998654 56789999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||+|||+.+++.+++.|+++ +.|||++||+++++..+||+|++|++|+++ +.|+.+++..
T Consensus 157 LDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 221 (301)
T TIGR03522 157 LDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIV-ADKKLDELSA 221 (301)
T ss_pred EcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHH
Confidence 99999999999999999999887 468999999999999999999999999997 6799888754
No 137
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=343.16 Aligned_cols=206 Identities=21% Similarity=0.302 Sum_probs=170.5
Q ss_pred eEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 399 VIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
.|+++||++.|+.+. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 489999999996321 24899999999999999999999999999999999999999999998762
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
..++|++|.+...+. ..++.+++... .......+.+.++++.+||......+++.+|||||+|||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLF-EDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhccc-hhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 147889987532222 24777766431 111123456788999999963334567899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|++.++.
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~ 234 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIV-SQTSPKELF 234 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHH
Confidence 9999999999999999999999999999865 469999999999999999999999999997 468776643
No 138
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-41 Score=344.17 Aligned_cols=219 Identities=19% Similarity=0.205 Sum_probs=162.8
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+............
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~------ 74 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLA------ 74 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHH------
Confidence 38899999999988899999999999999999999999999999999999999999988754321100000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+..+..+.+.........+..++.................++.++++.+|+. +..++++.+||||||||++||||
T Consensus 75 ---~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~lara 150 (271)
T PRK13638 75 ---LRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQ-HFRHQPIQCLSHGQKKRVAIAGA 150 (271)
T ss_pred ---HHhheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-hHhcCCchhCCHHHHHHHHHHHH
Confidence 00001111111000001111121111111111222333445678899999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
|+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++++.+.+.+
T Consensus 151 L~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 222 (271)
T PRK13638 151 LVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGE 222 (271)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999988765 6799999999999999999999999999998765433
No 139
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8e-41 Score=331.94 Aligned_cols=192 Identities=30% Similarity=0.435 Sum_probs=162.0
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------eeEEeeccchh
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------LRFARYHQHLH 474 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------~~~~~~~q~~~ 474 (629)
+++||++.|+. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|+..
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 36899999963 34899999999999999999999999999999999999999999999873 35889998764
Q ss_pred cccCCCCCHHHHHhhcCC---------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 475 ELLDLDISPLDYMLQSFP---------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
.......|+.+++..... .....+.+.++++.+|+... .++++.+|||||||||+|||||+.+|++||||
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~la~al~~~p~llllD 157 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSEL-ADRQIGELSGGQQQRVLLARALVQDPDLLLLD 157 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHH-HhCCcccCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 222234678877643211 11234567889999999754 45678999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 546 EPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
|||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|.+
T Consensus 158 EPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 158 EPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 999999999999999999876 36899999999999999999999998744
No 140
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=345.66 Aligned_cols=219 Identities=21% Similarity=0.269 Sum_probs=162.3
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||+++|++ .++|+||||+|++||+++|+||||||||||+++|+|+..|++|+|.+.+............
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~- 80 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKL- 80 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchH-
Confidence 4899999999974 4699999999999999999999999999999999999999999998765422100000000
Q ss_pred hhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
...+..+..+.++.. ...+.+..+++ .+..............++.++++.+||.....++++.+||||||||
T Consensus 81 ------~~~~~~ig~v~q~~~~~l~~~tv~eni-~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qr 153 (290)
T PRK13634 81 ------KPLRKKVGIVFQFPEHQLFEETVEKDI-CFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRR 153 (290)
T ss_pred ------HHHHhhEEEEeeCchhhhhhhhHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHH
Confidence 000000111111100 00111122222 1111111223344556788999999996556789999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||||++|++|++++.+.+
T Consensus 154 v~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 154 VAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999988654 68999999999999999999999999999976543
No 141
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-40 Score=347.83 Aligned_cols=215 Identities=22% Similarity=0.371 Sum_probs=167.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.++++|++++|++..+|+|+||+|++|+++||+|||||||||||++|+|++.|++|+|.+.+.. +.... .
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~--~~~~~-~------- 71 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGED--VLQNP-K------- 71 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--cccCh-H-------
Confidence 5899999999999999999999999999999999999999999999999999999999876432 11100 0
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+....+... +.+..+..++...+..+..........++.++++.||+. +..++++..|||||||||+||||
T Consensus 72 --~~~~~ig~~~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 72 --EVQRNIGYLPEHNP-LYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-PEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred --HHHhceEEecCCCC-CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-hHhcCchhhCCHHHHHHHHHHHH
Confidence 00011111111111 112222333333333332333344456788999999997 46789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|+.+|++|||||||+|||+.++.++++.|+++ +.|||++||+++++..+||||++|++|++++. |+.+.
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~-g~~~~ 218 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVAD-KKLDE 218 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEe-CCHHH
Confidence 99999999999999999999999999999877 57999999999999999999999999999965 45443
No 142
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=344.06 Aligned_cols=221 Identities=22% Similarity=0.339 Sum_probs=163.8
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||+++|++ +++|+||||+|++|+++||+||||||||||+++|+|++.|+.|+|.+.+............
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~- 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI- 80 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH-
Confidence 5899999999964 3699999999999999999999999999999999999999999988754321100000000
Q ss_pred hhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
...+..+..+.++.. ..... +..++..+..............++.++++.+|+..+..++++.+||||||||
T Consensus 81 ------~~~~~~ig~v~q~~~~~l~~~-tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qr 153 (286)
T PRK13646 81 ------RPVRKRIGMVFQFPESQLFED-TVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRK 153 (286)
T ss_pred ------HHHHhheEEEecChHhccchh-hHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHH
Confidence 000111111111110 01111 2222222111111233445566788999999996456788999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
|+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++++.+.+.+
T Consensus 154 v~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~ 232 (286)
T PRK13646 154 IAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKE 232 (286)
T ss_pred HHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999988754 6899999999999999999999999999997765433
No 143
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.8e-40 Score=331.00 Aligned_cols=201 Identities=25% Similarity=0.366 Sum_probs=167.6
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce----------eEEee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------RFARY 469 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------~~~~~ 469 (629)
|+++||++.|+++...+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 57899999996421348999999999999999999999999999999999999999999987642 37888
Q ss_pred ccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|... +....++.+++... .+.....+.+.++++.+|+.... ..++.+|||||+|||+|||||+.+|++|||
T Consensus 81 ~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llll 157 (220)
T cd03263 81 PQFDA--LFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-NKRARTLSGGMKRKLSLAIALIGGPSVLLL 157 (220)
T ss_pred cCcCC--ccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-hChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88743 33456777765321 11112245678899999997543 457799999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
||||++||+.+++.+.+.|.++. .|||++|||++++..+||++++|++|+++ ..|+.++
T Consensus 158 DEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~ 218 (220)
T cd03263 158 DEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLR-CIGSPQE 218 (220)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEE-ecCCHHH
Confidence 99999999999999999998763 58999999999999999999999999997 4566554
No 144
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.1e-40 Score=331.00 Aligned_cols=195 Identities=27% Similarity=0.344 Sum_probs=164.3
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~ 464 (629)
+|+++|+++.|+.+. .+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 1 ~l~~~~l~~~~~~~~-~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 1 MIRFEHVSKAYLGGR-QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred CEEEEeeEEEecCCC-eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 478999999994233 4899999999999999999999999999999999999999999998763 1
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
.++|++|+.. +....++.+++... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|
T Consensus 80 ~i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p 156 (222)
T PRK10908 80 QIGMIFQDHH--LLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKA-KNFPIQLSGGEQQRVGIARAVVNKP 156 (222)
T ss_pred heEEEecCcc--ccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhh-hCCchhCCHHHHHHHHHHHHHHcCC
Confidence 4678888753 33456777766432 11112234577899999997643 4577999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
++|||||||++||+.+++.+.+.|.++ +.+||+||||++++..+||+|++|++|+++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 157 AVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999998876 4689999999999999999999999999864
No 145
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-40 Score=335.14 Aligned_cols=200 Identities=31% Similarity=0.456 Sum_probs=168.0
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEE
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFA 467 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~ 467 (629)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 468999999963 34899999999999999999999999999999999999999999988763 2378
Q ss_pred eeccchhcccCCCCCHHHHHhhcC---C------------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHH
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF---P------------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 532 (629)
|++|... +....|+.+++.... . .....+.+.++++.+|+... .++++.+|||||||||+||
T Consensus 79 ~v~q~~~--l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 79 RTFQIPR--LFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADL-ADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEecccc--cccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccch-hhCChhhCCHHHHHHHHHH
Confidence 8888753 344567777654211 0 11224467889999999754 3567899999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+++++
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 230 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVI-AEGTPDEV 230 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-eecCHHHh
Confidence 9999999999999999999999999999999775 468999999999999999999999999997 46776554
No 146
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-41 Score=354.60 Aligned_cols=218 Identities=24% Similarity=0.371 Sum_probs=164.5
Q ss_pred eEEEEeEEEEeC----CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhh
Q psy10512 87 DVKIANFSITFH----GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~----~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
+|+++||+++|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~--i~~~~~~~~- 77 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQD--LTALSEKEL- 77 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEE--CCcCCHHHH-
Confidence 388999999997 4679999999999999999999999999999999999999999999875432 111000000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
...+..+..+.++...++. .+..++.................++.++++.+|+. +..++++.+|||||||||+
T Consensus 78 -----~~~~~~ig~v~q~~~l~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 78 -----RKARRQIGMIFQHFNLLSS-RTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-DKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred -----HHHhcCEEEEeCCCccCCC-CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHH
Confidence 0000011111111111111 22222222222222233334556788999999996 5678999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
|||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++++.+...
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~ 226 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVS 226 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999999999999988765 679999999999999999999999999999776543
No 147
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-40 Score=329.97 Aligned_cols=195 Identities=30% Similarity=0.402 Sum_probs=164.2
Q ss_pred EEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------eeEEeecc
Q psy10512 400 IMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------LRFARYHQ 471 (629)
Q Consensus 400 l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------~~~~~~~q 471 (629)
|+++|+++.|+... ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 47899999996311 35899999999999999999999999999999999999999999998773 35788888
Q ss_pred chhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 472 HLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
... +....++.+++... .......+.+.++++.+|+.... .+++.+|||||||||+|||||+.+|++|||||
T Consensus 81 ~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~la~al~~~p~lllLDE 157 (220)
T cd03293 81 QDA--LLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFE-NAYPHQLSGGMRQRVALARALAVDPDVLLLDE 157 (220)
T ss_pred ccc--cccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 753 33446777765321 11112345678899999997543 45779999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEe--CCEEEE
Q psy10512 547 PTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICE--NGKVTK 597 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~--~G~i~~ 597 (629)
||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|+ +|+++.
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~ 214 (220)
T cd03293 158 PFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVA 214 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEE
Confidence 99999999999999999765 4689999999999999999999999 799974
No 148
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-40 Score=331.02 Aligned_cols=192 Identities=31% Similarity=0.453 Sum_probs=160.7
Q ss_pred EEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------
Q psy10512 400 IMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------------- 463 (629)
Q Consensus 400 l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------------- 463 (629)
|+++||++.|++.. ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 34899999999999999999999999999999999999999999998752
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc--CC---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS--FP---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
..++|++|... +....++.+++... +. .....+.+.++++.+|+.... ++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~ 157 (218)
T cd03255 81 RRHIGFVFQSFN--LLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRL-NHYPSELSGGQQQRVAIARALAN 157 (218)
T ss_pred hhcEEEEeeccc--cCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-hcChhhcCHHHHHHHHHHHHHcc
Confidence 24788888753 33456777765432 11 112345678899999997644 55779999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++. +||++++|++|++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 158 DPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999999875 468999999999997 9999999999974
No 149
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=344.72 Aligned_cols=219 Identities=22% Similarity=0.300 Sum_probs=162.8
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|++ +.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.............
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 5899999999974 46999999999999999999999999999999999999999999988653211000000000
Q ss_pred hhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
..+..+..+.++.. ..... +..++.................++.++++.+|+..++.++++.+||||||||
T Consensus 82 -------~~~~~ig~v~q~~~~~~~~~-tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qr 153 (287)
T PRK13641 82 -------KLRKKVSLVFQFPEAQLFEN-TVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRR 153 (287)
T ss_pred -------HHHhceEEEEeChhhhhccc-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHH
Confidence 00000000111100 01111 2222222111111233344556788999999996457789999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.+
T Consensus 154 l~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 154 VAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999988765 57999999999999999999999999999876543
No 150
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.5e-40 Score=328.29 Aligned_cols=193 Identities=23% Similarity=0.336 Sum_probs=163.9
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|+++|+++.|+. . .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 i~~~~l~~~~~~-~-~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~ 78 (213)
T cd03301 1 VELENVTKRFGN-V-TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVF 78 (213)
T ss_pred CEEEeeEEEECC-e-eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEe
Confidence 478999999964 3 4899999999999999999999999999999999999999999998763 2478888
Q ss_pred cchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|+.. +....++.+++... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++||||
T Consensus 79 q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qr~~laral~~~p~llllD 155 (213)
T cd03301 79 QNYA--LYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLL-DRKPKQLSGGQRQRVALGRAIVREPKVFLMD 155 (213)
T ss_pred cChh--hccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHH-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8753 33456777765421 11112345677889999997543 5678999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~ 211 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQ 211 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEe
Confidence 999999999999999999765 5689999999999999999999999999974
No 151
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.6e-41 Score=357.75 Aligned_cols=214 Identities=23% Similarity=0.355 Sum_probs=164.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|+++.+|+|+||+|++||+++|+||||||||||||+|+|+++|++|+|.+.+.. +......
T Consensus 3 ~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~--i~~~~~~------- 73 (402)
T PRK09536 3 MIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDD--VEALSAR------- 73 (402)
T ss_pred eEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEE--cCcCCHH-------
Confidence 5999999999999999999999999999999999999999999999999999999999876532 1110000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh--hhhccC--hhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD--RLDDIS--ADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~--~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
..+..+..+.+.....+.. +..++..+.. ....+. .....+++.++++.+|+. ++.++++.+|||||||||+
T Consensus 74 --~~~~~ig~v~q~~~l~~~~-tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~-~~~~~~~~~LSgGerQRv~ 149 (402)
T PRK09536 74 --AASRRVASVPQDTSLSFEF-DVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVA-QFADRPVTSLSGGERQRVL 149 (402)
T ss_pred --HHhcceEEEccCCCCCCCC-CHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHH
Confidence 0000111111111111122 2222222111 001111 223456789999999996 6789999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||||+++|+||||||||++||+.++..++++|+++ +.|||++|||++++..+|||+++|++|+++..+.+
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~ 223 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPP 223 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999888765 67999999999999999999999999999977544
No 152
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.4e-40 Score=336.04 Aligned_cols=205 Identities=25% Similarity=0.373 Sum_probs=171.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
..+|+++||++.|++ ..+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 346899999999963 34899999999999999999999999999999999999999999988763
Q ss_pred -----------eeEEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHH
Q psy10512 464 -----------LRFARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQK 526 (629)
Q Consensus 464 -----------~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqk 526 (629)
..++|++|+.. +....++.+++... .......+++.++++.+|+......+++.+||||||
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~--l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~ 158 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFN--LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQ 158 (257)
T ss_pred cccchHHHHHhhceEEEecCcc--cCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHH
Confidence 13678887753 33446777776321 111123456788999999976543457899999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHH
Q psy10512 527 CRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNIL 603 (629)
Q Consensus 527 qrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 603 (629)
|||+|||||+.+|++|||||||++||+.+++.+.+.|.++ +.+||+||||++++..+||+|++|++|+++ +.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 237 (257)
T PRK10619 159 QRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPE 237 (257)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHH
Confidence 9999999999999999999999999999999999998775 568999999999999999999999999997 568876
Q ss_pred HHH
Q psy10512 604 DYK 606 (629)
Q Consensus 604 ~~~ 606 (629)
++.
T Consensus 238 ~~~ 240 (257)
T PRK10619 238 QLF 240 (257)
T ss_pred Hhh
Confidence 654
No 153
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.4e-40 Score=337.02 Aligned_cols=207 Identities=23% Similarity=0.321 Sum_probs=169.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------------ 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------------ 464 (629)
.++|+++|+++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 4 ~~~l~~~~l~~~~~~-~-~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~ 81 (258)
T PRK11701 4 QPLLSVRGLTKLYGP-R-KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEA 81 (258)
T ss_pred CceEEEeeeEEEcCC-c-eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHH
Confidence 357999999999963 3 48999999999999999999999999999999999999999999887642
Q ss_pred --------eEEeeccchhcccCCCCCHHHHHhh---cCC--C-hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHH
Q psy10512 465 --------RFARYHQHLHELLDLDISPLDYMLQ---SFP--E-VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 465 --------~~~~~~q~~~~~~~~~~~~~~~~~~---~~~--~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 530 (629)
.++|++|+....+....++.+++.. .+. . ......+.++++.+++......+++.+|||||+|||+
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~ 161 (258)
T PRK11701 82 ERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQ 161 (258)
T ss_pred HHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHH
Confidence 3778888764334444555444321 111 1 1224567789999999643345678999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.
T Consensus 162 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 240 (258)
T PRK11701 162 IARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVV-ESGLTDQVL 240 (258)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999999998654 568999999999999999999999999997 467776653
No 154
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.5e-40 Score=351.47 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=175.8
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeE
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRF 466 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~ 466 (629)
..++|+++|+++.|+. ..+|+++||+|.+||+++|+|||||||||||++|+|+++|++|+|.+++. ..+
T Consensus 11 ~~~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~i 88 (375)
T PRK09452 11 LSPLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHV 88 (375)
T ss_pred CCceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 3568999999999963 34899999999999999999999999999999999999999999998874 358
Q ss_pred EeeccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|++|+.. +...+++.+++.... +.....+++.++++.+||.+.. ++++.+|||||||||+|||||+.+|++
T Consensus 89 g~vfQ~~~--lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~p~~LSgGq~QRVaLARaL~~~P~l 165 (375)
T PRK09452 89 NTVFQSYA--LFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFA-QRKPHQLSGGQQQRVAIARAVVNKPKV 165 (375)
T ss_pred EEEecCcc--cCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 89999863 556778888875432 1112245678899999998654 456799999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||||++||+.++..+.+.|+++ +.|+|+||||.+++..+||+|++|++|+|+. .|+++++.
T Consensus 166 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~-~g~~~~i~ 233 (375)
T PRK09452 166 LLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQ-DGTPREIY 233 (375)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999999999988764 5789999999999999999999999999974 67776654
No 155
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.1e-40 Score=330.01 Aligned_cols=196 Identities=21% Similarity=0.335 Sum_probs=165.7
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeE
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~ 466 (629)
+|+++|+++.|+... ..+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 478999999996421 14899999999999999999999999999999999999999999998763 247
Q ss_pred EeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|++|... +....++.+++... .......+.+.++++.+|+.+.. .+++.+|||||||||+|||||+.+|++
T Consensus 81 ~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 81 GFVSDSTG--LYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-DRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EEecCCcc--cCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-hhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 88888752 34456777765321 11112345678899999997543 567899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999876 4699999999999999999999999999864
No 156
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=340.39 Aligned_cols=207 Identities=25% Similarity=0.389 Sum_probs=173.2
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+++|+++|+++.|+.+ ..+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 81 (283)
T PRK13636 3 DYILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLR 81 (283)
T ss_pred CceEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHH
Confidence 4589999999999533 34899999999999999999999999999999999999999999998763
Q ss_pred eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccC
Q psy10512 464 LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 464 ~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 538 (629)
..++|++|.+...+ ...++.+++... .+.....+.+..+++.+||.+. .++++.+|||||+|||+|||||+.+
T Consensus 82 ~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-~~~~~~~LS~G~~qrl~laraL~~~ 159 (283)
T PRK13636 82 ESVGMVFQDPDNQL-FSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-KDKPTHCLSFGQKKRVAIAGVLVME 159 (283)
T ss_pred hhEEEEecCcchhh-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-hhCCcccCCHHHHHHHHHHHHHHcC
Confidence 13788888753222 345777776421 1222234567889999999754 4567899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ +.|+++++..
T Consensus 160 p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 231 (283)
T PRK13636 160 PKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVI-LQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999988765 569999999999999999999999999997 5788776543
No 157
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.5e-40 Score=341.48 Aligned_cols=217 Identities=22% Similarity=0.262 Sum_probs=162.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +.........
T Consensus 7 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--i~~~~~~~~~---- 80 (269)
T PRK11831 7 LVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGEN--IPAMSRSRLY---- 80 (269)
T ss_pred eEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--ccccChhhHH----
Confidence 5999999999998899999999999999999999999999999999999999999998875432 1110000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..+.++...++..+..+++.................++.++|+.+|+. +..++++.+|||||||||+||||
T Consensus 81 --~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~lara 157 (269)
T PRK11831 81 --TVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR-GAAKLMPSELSGGMARRAALARA 157 (269)
T ss_pred --HHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHH
Confidence 000001111111111111122232221111111122233445678899999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 158 IALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999988764 5799999999999999999999999999987643
No 158
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.8e-40 Score=372.57 Aligned_cols=208 Identities=26% Similarity=0.389 Sum_probs=178.6
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcc
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHEL 476 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~ 476 (629)
+++|+++||++.|+++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++...++|++|++.
T Consensus 4 ~~~l~i~~l~~~y~~~-~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~-- 80 (556)
T PRK11819 4 QYIYTMNRVSKVVPPK-KQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQ-- 80 (556)
T ss_pred cEEEEEeeEEEEeCCC-CeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCC--
Confidence 5689999999999622 3489999999999999999999999999999999999999999999887778999999853
Q ss_pred cCCCCCHHHHHhhcC-----------------CCh------------------------hhHHHHHHHHHHcCCCCcccc
Q psy10512 477 LDLDISPLDYMLQSF-----------------PEV------------------------KDREEMRKIIGRYGLTGRQQV 515 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~-----------------~~~------------------------~~~~~~~~~l~~~gl~~~~~~ 515 (629)
+....|+.+++.... ... ....++..+++.+|+.. .+
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~ 158 (556)
T PRK11819 81 LDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP--WD 158 (556)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc--cc
Confidence 334567776653211 000 01345678899999953 35
Q ss_pred cCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 516 CPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 516 ~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
+++.+|||||||||+|||||+.+|++|||||||||||+.++..+.+.|+++.+|||+||||++++..+||+|++|++|++
T Consensus 159 ~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i 238 (556)
T PRK11819 159 AKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRG 238 (556)
T ss_pred CchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEE
Confidence 68899999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred EEecCCHHHHHHHH
Q psy10512 596 TKWEGNILDYKETL 609 (629)
Q Consensus 596 ~~~~g~~~~~~~~~ 609 (629)
+.+.|++++|.+..
T Consensus 239 ~~~~g~~~~~~~~~ 252 (556)
T PRK11819 239 IPWEGNYSSWLEQK 252 (556)
T ss_pred EEecCCHHHHHHHH
Confidence 87899999886543
No 159
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=343.95 Aligned_cols=221 Identities=24% Similarity=0.310 Sum_probs=163.5
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|++++|+. ..+|+|+||+|.+|++++|+||||||||||+++|+|++.|++|++.+.+............
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~- 79 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEI- 79 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccH-
Confidence 3899999999973 2599999999999999999999999999999999999999999998764321100000000
Q ss_pred hhhhhchHHHHHHHHHHHHH-hccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQL-VACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
...+..+..++++. ......+..+++ .+..........+...++.++++.+|+..++.++++.+||||||||
T Consensus 80 ------~~~~~~ig~v~q~~~~~l~~~tv~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqr 152 (288)
T PRK13643 80 ------KPVRKKVGVVFQFPESQLFEETVLKDV-AFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRR 152 (288)
T ss_pred ------HHHHhhEEEEecCcchhcccchHHHHH-HhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHH
Confidence 00001111111110 001111222222 1111111233344566789999999996456789999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
|+|||||+.+|+||||||||++||+.++.+|.+.|.++ +.|||+||||++++..+||+|++|++|++++.+.+.+
T Consensus 153 vaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 153 VAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999988654 6899999999999999999999999999997755433
No 160
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3e-40 Score=331.13 Aligned_cols=199 Identities=26% Similarity=0.376 Sum_probs=162.9
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+|+++||++.|+... ..+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 478999999996421 14899999999999999999999999999999999999999999998763
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc---CC-Chh--hHHH-HHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS---FP-EVK--DREE-MRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~-~~~--~~~~-~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
..++|++|.....+....++.+++... .. ... .... +.++++.+++.......++.+|||||+|||+|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 147788887532344456777765321 11 111 1122 247889999953334567899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 226 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVE 226 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEe
Confidence 9999999999999999999999999999765 4689999999999999999999999999863
No 161
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-40 Score=330.66 Aligned_cols=205 Identities=26% Similarity=0.347 Sum_probs=154.3
Q ss_pred EEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 89 KIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 89 ~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+++|++++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|+.|++.+.+.. +......
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~------- 71 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKD--LTKLSLK------- 71 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE--cccCCHH-------
Confidence 36899999987 789999999999999999999999999999999999999999998875432 1110000
Q ss_pred chHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+..+.+... ..+..+..+++ ................++.++++.+|+. +..++++.+|||||||||+|||
T Consensus 72 --~~~~~i~~~~q~~~~~~~~~t~~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~lar 147 (211)
T cd03225 72 --ELRRKVGLVFQNPDDQFFGPTVEEEV-AFGLENLGLPEEEIEERVEEALELVGLE-GLRDRSPFTLSGGQKQRVAIAG 147 (211)
T ss_pred --HHHhhceEEecChhhhcCCCcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHH
Confidence 00111111111110 01111222222 2111111122233455788899999996 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCe
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRK 306 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~ 306 (629)
||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 148 VLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999988765 5799999999999999999999999884
No 162
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=341.78 Aligned_cols=217 Identities=21% Similarity=0.310 Sum_probs=164.7
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|+++|+++.|+ +..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~~~~----- 76 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGRE--VNAENEKW----- 76 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEE--CCCCCHHH-----
Confidence 599999999996 5679999999999999999999999999999999999999999999876532 11110000
Q ss_pred hchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
.+..+..+.+... .....+..+++ ........+.......++.++++.+|+. +..++++.+|||||+|||+||
T Consensus 77 ----~~~~i~~v~q~~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 77 ----VRSKVGLVFQDPDDQVFSSTVWDDV-AFGPVNMGLDKDEVERRVEEALKAVRMW-DFRDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred ----HHhhEEEEecChhhhhccCcHHHHH-HhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCChhhCCHHHHHHHHHH
Confidence 0000111111100 01111222222 2111111233334456788999999996 678999999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|||+.+|++|||||||++||+.++.++++.|+++ +.|||+||||++++..+||+|++|++|++++.+.+ +.+
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~-~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDK-SLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH-HHh
Confidence 9999999999999999999999999999988765 68999999999999999999999999999977654 444
No 163
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=345.69 Aligned_cols=207 Identities=22% Similarity=0.296 Sum_probs=171.0
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC----CCccEEEECCce--------
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT----PSVGMVRKNSHL-------- 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~----p~~G~i~~~~~~-------- 464 (629)
+|+++||++.|+... ..+|+||||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|..
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 689999999996422 248999999999999999999999999999999999998 489999988731
Q ss_pred -------eEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCC--cccccCcCcCChhHHHHH
Q psy10512 465 -------RFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTG--RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 465 -------~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~--~~~~~~~~~LSgGqkqrv 529 (629)
.++|++|.....++..+++.+.+.. ........+.+.++|+.+||.. ...++++.+|||||+|||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 4889999865445555666543321 1111233567889999999974 223457799999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||+.+|+||||||||++||+.++..++++|.++ +.|+|+||||++++..+||+|++|++|+|++ .|+.+++
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive-~g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE-TGKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 9999999999999999999999999999999998765 4689999999999999999999999999985 5766554
Q ss_pred H
Q psy10512 606 K 606 (629)
Q Consensus 606 ~ 606 (629)
.
T Consensus 242 ~ 242 (326)
T PRK11022 242 F 242 (326)
T ss_pred h
Confidence 3
No 164
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-40 Score=329.29 Aligned_cols=205 Identities=27% Similarity=0.355 Sum_probs=157.6
Q ss_pred EEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|++.+.+.. +... ...+.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~-~~~i~~ 77 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEP--VTGP-GPDRGY 77 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--Cccc-cCcEEE
Confidence 468999999987 789999999999999999999999999999999999999999998775432 1100 001111
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
+.+ ....+ +..+..++.................++.++++.+|+. +..++++.+||||||||++|
T Consensus 78 v~q-------------~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrl~l 142 (220)
T cd03293 78 VFQ-------------QDALL-PWLTVLDNVALGLELQGVPKAEARERAEELLELVGLS-GFENAYPHQLSGGMRQRVAL 142 (220)
T ss_pred Eec-------------ccccc-cCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHH
Confidence 110 00011 1112222222111111222233456788999999996 56788999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEc--CCeEEEE
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLD--KRKLKYY 310 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~--~G~i~~~ 310 (629)
||||+.+|++|||||||++||+.++.++++.|+++ +.|||+||||++++..+||++++|+ +|+++..
T Consensus 143 a~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~ 215 (220)
T cd03293 143 ARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAE 215 (220)
T ss_pred HHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEE
Confidence 99999999999999999999999999999988654 6799999999999999999999999 7999764
No 165
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=351.20 Aligned_cols=202 Identities=24% Similarity=0.299 Sum_probs=172.4
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARY 469 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~ 469 (629)
.|+++|+++.|++ ..+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|+
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v 80 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMV 80 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEE
Confidence 5899999999963 34899999999999999999999999999999999999999999998763 248899
Q ss_pred ccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|... +...+|+.+++.... ......+++.++++.+||.+.. ++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~Q~~~--l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-~~~~~~LSgGq~QRvaLAraL~~~P~lLLL 157 (369)
T PRK11000 81 FQSYA--LYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-DRKPKALSGGQRQRVAIGRTLVAEPSVFLL 157 (369)
T ss_pred eCCcc--cCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98753 445678888765321 1112345688999999997644 457799999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||++||+.+++.+.+.|+++ +.|+|+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~-~~g~~~~i~ 222 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVA-QVGKPLELY 222 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 9999999999999999888765 568999999999999999999999999997 467776654
No 166
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=329.26 Aligned_cols=208 Identities=27% Similarity=0.453 Sum_probs=159.5
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|+++.|+++++|+|+||+|++| +++|+||||||||||+++|+|+++|++|++.+.+. ++.... .
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~--~~~~~~-~-------- 68 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQ--DVLKQP-Q-------- 68 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCC--ccccch-H--------
Confidence 57899999999889999999999999 99999999999999999999999999999877542 111100 0
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..+..+..+.++...+ +..+..++......+......+....+.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 69 -~~~~~i~~~~q~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 69 -KLRRRIGYLPQEFGVY-PNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLG-DRAKKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred -HHHhheEEecCCCccc-ccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCH-HHHhCchhhCCHHHHHHHHHHHHH
Confidence 0011111111111111 1122222222222222222333456788999999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|++++.
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~ 210 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFE 210 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999876 58999999999999999999999999999754
No 167
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=329.27 Aligned_cols=206 Identities=21% Similarity=0.377 Sum_probs=159.4
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|+++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +...
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~----------- 67 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKP--LDIA----------- 67 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCc--hhHH-----------
Confidence 478999999998899999999999999999999999999999999999999999998875321 1000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
.+..+..+.+....+ +..+..++................+.+.++++.+|+. ...++++.+|||||||||+|||||
T Consensus 68 --~~~~i~~~~q~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 68 --ARNRIGYLPEERGLY-PKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-EYANKRVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred --HHccEEEeccCCcCC-cCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-HHHhCcHhhCCHHHHHHHHHHHHH
Confidence 000000111111111 1112222222222222222334456788999999996 567888999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++++
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~ 209 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLY 209 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEec
Confidence 9999999999999999999999999988765 57999999999999999999999999999754
No 168
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.1e-40 Score=347.83 Aligned_cols=202 Identities=24% Similarity=0.318 Sum_probs=173.4
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARY 469 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~ 469 (629)
+|+++|+++.|+. ..+|+++||+|.+||+++|+|||||||||||++|+|+++|++|+|.+++. ..++|+
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v 79 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFV 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEE
Confidence 5899999999964 34899999999999999999999999999999999999999999998763 358899
Q ss_pred ccchhcccCCCCCHHHHHhhcCC---------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 470 HQHLHELLDLDISPLDYMLQSFP---------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+|+.. +...+++.+++..... .....+++.++++.++|.+.. ++++.+|||||||||+|||||+.+|+
T Consensus 80 ~Q~~~--l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LSgGq~QRvalArAL~~~P~ 156 (353)
T PRK10851 80 FQHYA--LFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-DRYPAQLSGGQKQRVALARALAVEPQ 156 (353)
T ss_pred ecCcc--cCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-hCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99853 4556788887753321 112345788999999997654 46779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||||++||+.+++.+.+.|.++ +.|+|+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 157 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~-~~g~~~~i~ 225 (353)
T PRK10851 157 ILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE-QAGTPDQVW 225 (353)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999999999999888765 568999999999999999999999999997 468877654
No 169
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4e-40 Score=328.80 Aligned_cols=194 Identities=26% Similarity=0.408 Sum_probs=162.1
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+|+++||++.|++.. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 478999999996321 34899999999999999999999999999999999999999999998752
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..++|++|... +....++.+++... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+
T Consensus 81 ~~~~i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~ 157 (221)
T TIGR02211 81 RNKKLGFIYQFHH--LLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-NHRPSELSGGERQRVAIARALV 157 (221)
T ss_pred HHhcEEEEecccc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHh
Confidence 24788888742 33456777765421 11112345678899999997544 5677999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||++++|++|+++
T Consensus 158 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 158 NQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999999764 5689999999999965 7999999999974
No 170
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-40 Score=331.37 Aligned_cols=203 Identities=27% Similarity=0.409 Sum_probs=168.9
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+|+++|+++.|++.. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 478999999996421 14899999999999999999999999999999999999999999998763
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
..++|++|... +....|+.+++... .........+.++++.+|+.... ++++.+|||||+|||+|||||+.
T Consensus 81 ~~~i~~~~q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 81 RRRIGMIFQHFN--LLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKA-DAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred HhheEEEccCcc--cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhh-hcChhhCCHHHHHHHHHHHHHhc
Confidence 23678887753 33456777765421 11112345678899999997543 45779999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 228 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVV-EEGTVEEV 228 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHHH
Confidence 99999999999999999999999999765 468999999999999999999999999997 46766554
No 171
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.1e-40 Score=333.77 Aligned_cols=219 Identities=26% Similarity=0.364 Sum_probs=163.9
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 2 l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~------- 72 (240)
T PRK09493 2 IEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLK--VNDPKVDE------- 72 (240)
T ss_pred EEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--CCcCChhH-------
Confidence 789999999998899999999999999999999999999999999999999999998876432 11100000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
...+..+....+....++..+..+++.................++.++++.+|+. ...++++.+|||||||||+|||||
T Consensus 73 ~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 73 RLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLA-ERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred HHHhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCh-HHHhcChhhcCHHHHHHHHHHHHH
Confidence 0000011111111111111122222211111111223334456788999999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++++. |+.+++
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~-g~~~~~ 223 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAED-GDPQVL 223 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEee-CCHHHH
Confidence 9999999999999999999999999988654 68999999999999999999999999999876 444433
No 172
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=334.78 Aligned_cols=194 Identities=25% Similarity=0.329 Sum_probs=164.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------eEEeeccc
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------RFARYHQH 472 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------~~~~~~q~ 472 (629)
+|+++|+++.|++ . .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|++|.
T Consensus 1 ml~~~~l~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~ 78 (255)
T PRK11248 1 MLQISHLYADYGG-K-PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN 78 (255)
T ss_pred CEEEEEEEEEeCC-e-eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC
Confidence 4789999999963 3 48999999999999999999999999999999999999999999987632 37888887
Q ss_pred hhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCC
Q psy10512 473 LHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEP 547 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 547 (629)
.. +....++.+++... .......+++.++++.+|+.... .+++.+|||||||||+|||||+.+|++||||||
T Consensus 79 ~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEP 155 (255)
T PRK11248 79 EG--LLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAE-KRYIWQLSGGQRQRVGIARALAANPQLLLLDEP 155 (255)
T ss_pred Cc--cCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 53 33446777765421 11112345678999999997543 457799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEe--CCEEEE
Q psy10512 548 TNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICE--NGKVTK 597 (629)
Q Consensus 548 T~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~--~G~i~~ 597 (629)
|+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|+ +|+++.
T Consensus 156 t~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~ 211 (255)
T PRK11248 156 FGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVE 211 (255)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEE
Confidence 9999999999999999875 4689999999999999999999998 599865
No 173
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.2e-40 Score=328.33 Aligned_cols=192 Identities=30% Similarity=0.429 Sum_probs=159.5
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEee
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFARY 469 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~~ 469 (629)
+++|+++.|+.....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 368999999642134899999999999999999999999999999999999999999998763 246788
Q ss_pred ccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|.... .....++.+++... .......+.+.++++.+|+... ..+++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~~~-~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 81 FQNPDD-QFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGL-RDRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred ecChhh-hcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhh-hcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887421 12346777765421 1111234567889999999754 3467899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCE
Q psy10512 545 DEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGK 594 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~ 594 (629)
||||+|||+.+++.+.+.|.++ +.+||+||||++++..+||+|++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999876 4589999999999999999999999884
No 174
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-40 Score=335.81 Aligned_cols=212 Identities=21% Similarity=0.336 Sum_probs=159.3
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +........
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~~------ 72 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGED--ITGLPPHEI------ 72 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEE--CCCCCHHHH------
Confidence 468999999998889999999999999999999999999999999999999999998875432 111100000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh-cc---------ChhhHHHHHHHHHHhCCCCchhhhcccCCCChHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD-DI---------SADTAEARAANILHGLGFTKEMQQKKTKDFSGGW 237 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---------~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 237 (629)
.+..+..+.+....+ +..+..++........ .. .......++.++++.+|+. ...++++.+|||||
T Consensus 73 --~~~~i~~v~q~~~l~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~ 148 (236)
T cd03219 73 --ARLGIGRTFQIPRLF-PELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-DLADRPAGELSYGQ 148 (236)
T ss_pred --HhcCEEEEecccccc-cCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-chhhCChhhCCHHH
Confidence 000000111111111 1112222222111110 00 1223455788999999996 56788999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||||+|||||+.+|++|||||||++||+.++.++++.|+++ +.|||+||||++++..+||++++|++|+++..+
T Consensus 149 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~ 225 (236)
T cd03219 149 QRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEG 225 (236)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeec
Confidence 99999999999999999999999999999999999988764 579999999999999999999999999998654
No 175
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=351.79 Aligned_cols=217 Identities=25% Similarity=0.360 Sum_probs=170.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+++.|++..+|+|+||+|++|++++|+|||||||||||++|+|++.|+.|+|.+.+.. +...
T Consensus 19 ~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~--i~~~---------- 86 (377)
T PRK11607 19 LLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVD--LSHV---------- 86 (377)
T ss_pred eEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEE--CCCC----------
Confidence 5999999999998889999999999999999999999999999999999999999999876532 1110
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+..+.+++++...++..+..+++ .+..........+..+++.++++.+|+. ++.++++.+|||||||||+||||
T Consensus 87 -~~~~r~ig~vfQ~~~lfp~ltv~eNi-~~~l~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 87 -PPYQRPINMMFQSYALFPHMTVEQNI-AFGLKQDKLPKAEIASRVNEMLGLVHMQ-EFAKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred -CHHHCCEEEEeCCCccCCCCCHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHH
Confidence 01111111222222223332333333 3222222234445667889999999996 57899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELK----TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFC 318 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~----~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~ 318 (629)
|+.+|+||||||||++||+..+.++.+.|+ +.+.|+|+||||++++..+||+|++|++|+++..+.+.+.|.
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 999999999999999999999988876554 457899999999999999999999999999998877665543
No 176
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-40 Score=325.81 Aligned_cols=193 Identities=24% Similarity=0.435 Sum_probs=164.5
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------eeEEeeccc
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------LRFARYHQH 472 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------~~~~~~~q~ 472 (629)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|.
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~ 78 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEE 78 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccC
Confidence 478999999953 34899999999999999999999999999999999999999999999873 357888887
Q ss_pred hhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCC
Q psy10512 473 LHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEP 547 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 547 (629)
.. +....++.+++... .+.....+.+.++++.+|+.... .+++.+|||||||||+||+||+.+|++||||||
T Consensus 79 ~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP 155 (210)
T cd03269 79 RG--LYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-NKRVEELSKGNQQKVQFIAAVIHDPELLILDEP 155 (210)
T ss_pred Cc--CCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-hCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 53 33456777765321 11122345678899999997543 457799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 548 TNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 548 T~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|+|||+.++..+.+.|+++ +.|||++|||.+++..+||++++|++|+++.
T Consensus 156 ~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 156 FSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999876 4689999999999999999999999999864
No 177
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.3e-40 Score=333.00 Aligned_cols=212 Identities=22% Similarity=0.263 Sum_probs=159.6
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|+++.|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|++.+.+... ........
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~--~~~~~~~~------ 72 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDI--TKLPMHKR------ 72 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEec--ccCCHhHH------
Confidence 4789999999988999999999999999999999999999999999999999999988754321 11000000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
.+..+....+....+ +..+..++.................++.++++.+|+. +..++.+.+|||||||||+|||||
T Consensus 73 --~~~~i~~~~q~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al 148 (232)
T cd03218 73 --ARLGIGYLPQEASIF-RKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT-HLRKSKASSLSGGERRRVEIARAL 148 (232)
T ss_pred --HhccEEEecCCcccc-ccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHH
Confidence 000000011111111 1112222222111111122233445778899999996 567899999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++..+
T Consensus 149 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 215 (232)
T cd03218 149 ATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEG 215 (232)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEe
Confidence 9999999999999999999999999988654 679999999999999999999999999998654
No 178
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-40 Score=332.02 Aligned_cols=210 Identities=25% Similarity=0.405 Sum_probs=154.7
Q ss_pred EEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++||+++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|+.|++.+.+.. +.........
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~--~~~~~~~~~~- 77 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTD--ISKLSEKELA- 77 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEe--hhhcchhHHH-
Confidence 468999999986 789999999999999999999999999999999999999999998875432 1100000000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
...+..+..+.+....+ +..+..++................+++.++++.+|+. ...++++.+|||||||||+|
T Consensus 78 ----~~~~~~i~~~~q~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~l 151 (218)
T cd03255 78 ----AFRRRHIGFVFQSFNLL-PDLTALENVELPLLLAGVPKKERRERAEELLERVGLG-DRLNHYPSELSGGQQQRVAI 151 (218)
T ss_pred ----HHHhhcEEEEeeccccC-CCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-hhhhcChhhcCHHHHHHHHH
Confidence 00000011111111111 1112222222211111222223456788999999996 45788999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeE
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKL 307 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i 307 (629)
||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++. +||++++|++|++
T Consensus 152 a~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 152 ARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999999999988764 579999999999997 9999999999874
No 179
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.2e-40 Score=333.59 Aligned_cols=202 Identities=24% Similarity=0.429 Sum_probs=169.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------- 463 (629)
+|+++||++.|++ . .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~l~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG-Q-TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC-e-eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 6899999999963 3 4899999999999999999999999999999999999999999987652
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhc---C---CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQS---F---PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAY 533 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 533 (629)
..++|++|... +....++.+++... . ......+.+.++++.+|+.... ++++.+|||||+|||+|||
T Consensus 81 ~~~~~~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~Gq~qrv~la~ 157 (250)
T PRK11264 81 RQLRQHVGFVFQNFN--LFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-TSYPRRLSGGQQQRVAIAR 157 (250)
T ss_pred HHhhhhEEEEecCcc--cCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-hCChhhCChHHHHHHHHHH
Confidence 14678887643 33446777765321 1 1112235678899999997543 4678999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 534 LAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 534 al~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||+.+|++|||||||+|||+.++..+.+.|.++ +.+||+||||++++..+||++++|++|+++ +.|+.+++.
T Consensus 158 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 232 (250)
T PRK11264 158 ALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIV-EQGPAKALF 232 (250)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999988765 568999999999999999999999999997 467776654
No 180
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=8.5e-40 Score=344.19 Aligned_cols=211 Identities=19% Similarity=0.318 Sum_probs=174.3
Q ss_pred CCCCeEEEEEEEEEEcC--CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC---ccEEEECCc------
Q psy10512 395 IPPPVIMVQNVSFRYSD--DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS---VGMVRKNSH------ 463 (629)
Q Consensus 395 ~~~~~l~~~~l~~~y~~--~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~---~G~i~~~~~------ 463 (629)
...++|+++||++.|+. +...+++||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.
T Consensus 8 ~~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~ 87 (330)
T PRK09473 8 QADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP 87 (330)
T ss_pred CCCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCC
Confidence 34578999999999953 2235899999999999999999999999999999999999996 999998873
Q ss_pred ---------eeEEeeccchhcccCCCCCHHHHHhh---c---CCChhhHHHHHHHHHHcCCCCc--ccccCcCcCChhHH
Q psy10512 464 ---------LRFARYHQHLHELLDLDISPLDYMLQ---S---FPEVKDREEMRKIIGRYGLTGR--QQVCPIRQLSDGQK 526 (629)
Q Consensus 464 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqk 526 (629)
..++|++|+....++..+++.+++.. . .......+++.++|+.+||... ...+++.+|||||+
T Consensus 88 ~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 88 EKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 15889999875456666776654421 1 1111234567889999999742 12356799999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCH
Q psy10512 527 CRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602 (629)
Q Consensus 527 qrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 602 (629)
|||+|||||+.+|+|||+||||++||+.++..++++|.++ +.|+|+||||++++..+||+|++|++|+|++ .|+.
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive-~g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME-YGNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCH
Confidence 9999999999999999999999999999999999988765 5689999999999999999999999999985 6776
Q ss_pred HHHH
Q psy10512 603 LDYK 606 (629)
Q Consensus 603 ~~~~ 606 (629)
+++.
T Consensus 247 ~~i~ 250 (330)
T PRK09473 247 RDVF 250 (330)
T ss_pred HHHH
Confidence 6654
No 181
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-40 Score=331.96 Aligned_cols=203 Identities=28% Similarity=0.363 Sum_probs=169.0
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++||++.|++. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4689999999642 34899999999999999999999999999999999999999999998763 24678
Q ss_pred eccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCC-cccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 469 YHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTG-RQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
++|... +....|+.+++... .......+.+.++++.+|+.. ....+++.+|||||+|||+|||||+.+|++|
T Consensus 80 ~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 157 (242)
T cd03295 80 VIQQIG--LFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLL 157 (242)
T ss_pred EccCcc--ccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 888753 34456777775421 111123456788999999974 2345677999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||||++||+.++..+.+.|.++ +.+||+||||.+++..+||+|++|++|+++. .|+.+++.
T Consensus 158 llDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 224 (242)
T cd03295 158 LMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-VGTPDEIL 224 (242)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHH
Confidence 999999999999999999998875 4689999999999999999999999999974 57766553
No 182
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.3e-40 Score=330.26 Aligned_cols=210 Identities=27% Similarity=0.404 Sum_probs=160.5
Q ss_pred EEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 88 VKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 88 i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|+++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.... .
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~-~------ 71 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYS--IRTDR-K------ 71 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEe--cccch-H------
Confidence 578999999987 789999999999999999999999999999999999999999999875432 11000 0
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+..+.++.. ..+..+..++.................++.++++.+|+. +..++++.+|||||+|||+|||
T Consensus 72 ---~~~~~i~~v~q~~~-~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~ 146 (220)
T cd03263 72 ---AARQSLGYCPQFDA-LFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-DKANKRARTLSGGMKRKLSLAI 146 (220)
T ss_pred ---HHhhhEEEecCcCC-ccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHHhChhhhCCHHHHHHHHHHH
Confidence 00001111111111 111112222222222112222333456788999999996 5678889999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||+.+|++|||||||++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|+++..+
T Consensus 147 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 214 (220)
T cd03263 147 ALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIG 214 (220)
T ss_pred HHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999765 479999999999999999999999999998764
No 183
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-40 Score=337.52 Aligned_cols=205 Identities=25% Similarity=0.386 Sum_probs=171.1
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRF 466 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~ 466 (629)
++|+++||++.|+... .+|+++||+|.+||+++|+|+||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 2 ~~l~~~~l~~~~~~~~-~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 2 HLIETRDLCYSYSGSK-EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred ceEEEEEEEEEeCCCC-ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4689999999995333 3899999999999999999999999999999999999999999998763 147
Q ss_pred EeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|++|.....+ ...++.+++... .......+.+.++++.+|+.... .+++.+|||||||||+|||||+.+|++
T Consensus 81 ~~v~q~~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrl~laraL~~~p~l 158 (277)
T PRK13652 81 GLVFQNPDDQI-FSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-DRVPHHLSGGEKKRVAIAGVIAMEPQV 158 (277)
T ss_pred EEEecCccccc-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-cCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 88888753222 245777766421 11112234678899999997544 457799999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||||+|||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ +.|+++++.
T Consensus 159 lilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~-~~g~~~~~~ 226 (277)
T PRK13652 159 LVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIV-AYGTVEEIF 226 (277)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-EECCHHHHh
Confidence 9999999999999999999998764 568999999999999999999999999997 568887764
No 184
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.9e-40 Score=329.22 Aligned_cols=210 Identities=27% Similarity=0.396 Sum_probs=157.3
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+|+++||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +.......
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~------- 71 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLK--LTDDKKNI------- 71 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--CCccchhH-------
Confidence 468999999998899999999999999999999999999999999999999999998875432 11000000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
...+..+..+.+....++..+..+++.................++.++++.+|+. ...++++.+|||||+|||+|||||
T Consensus 72 ~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 72 NELRQKVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLA-DKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred HHHHhcceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhhCccccCHHHHHHHHHHHHH
Confidence 0000011111111111111122222211111111222334456788899999996 567899999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKL 307 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i 307 (629)
+.+|++|||||||++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999998765 57999999999999999999999999874
No 185
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.1e-40 Score=347.84 Aligned_cols=203 Identities=24% Similarity=0.311 Sum_probs=174.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCc--cEEEECCc---------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSV--GMVRKNSH---------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~--G~i~~~~~---------~~~~ 467 (629)
.|+++||++.|+. ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++ |+|.+++. ..++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig 82 (362)
T TIGR03258 5 GIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLA 82 (362)
T ss_pred EEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEE
Confidence 3789999999963 348999999999999999999999999999999999999999 99998763 3588
Q ss_pred eeccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|+.. +...+|+.+++.... +.....+++.++++.+||.+.. ++++.+|||||||||+|||||+.+|++|
T Consensus 83 ~vfQ~~~--l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~-~~~~~~LSgGq~QRvaLARAL~~~P~ll 159 (362)
T TIGR03258 83 LLFQNYA--LFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAA-AHLPAQLSGGMQQRIAIARAIAIEPDVL 159 (362)
T ss_pred EEECCcc--cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchh-hCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999864 456778888775321 2122345688999999998654 5577999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc-----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF-----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~-----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||||++||+.++..+.+.|.++ +.|+|+||||++++..+||+|++|++|+++ ..|+++++.+
T Consensus 160 LLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~-~~g~~~~~~~ 228 (362)
T TIGR03258 160 LLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLA-AHGEPQALYD 228 (362)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 999999999999999999988654 468999999999999999999999999997 4688776644
No 186
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=346.04 Aligned_cols=208 Identities=19% Similarity=0.278 Sum_probs=171.3
Q ss_pred CeEEEEEEEEEEcC--CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC----CCccEEEECCc--------
Q psy10512 398 PVIMVQNVSFRYSD--DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT----PSVGMVRKNSH-------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~--~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~----p~~G~i~~~~~-------- 463 (629)
++|+++||++.|+. +...+|+||||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 47999999999952 22358999999999999999999999999999999999997 58999998763
Q ss_pred -------eeEEeeccchhcccCCCCCHHHHHhhc-----CC-----C-hhhHHHHHHHHHHcCCCCc--ccccCcCcCCh
Q psy10512 464 -------LRFARYHQHLHELLDLDISPLDYMLQS-----FP-----E-VKDREEMRKIIGRYGLTGR--QQVCPIRQLSD 523 (629)
Q Consensus 464 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~-----~-~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSg 523 (629)
..++|++|+....++...++.+.+... .. . ....+.+.++|+.+||... ..++++.+|||
T Consensus 82 ~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSg 161 (330)
T PRK15093 82 ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE 161 (330)
T ss_pred HHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCH
Confidence 148899998654455556665554321 10 1 1234568899999999742 23456799999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEec
Q psy10512 524 GQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWE 599 (629)
Q Consensus 524 Gqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~ 599 (629)
||+|||+|||||+.+|+||||||||++||+.++..++++|.++ +.|||+||||++++..+||+|++|++|+|++ .
T Consensus 162 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive-~ 240 (330)
T PRK15093 162 GECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVE-T 240 (330)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-E
Confidence 9999999999999999999999999999999999999998764 5689999999999999999999999999974 6
Q ss_pred CCHHHHH
Q psy10512 600 GNILDYK 606 (629)
Q Consensus 600 g~~~~~~ 606 (629)
|+.+++.
T Consensus 241 g~~~~i~ 247 (330)
T PRK15093 241 APSKELV 247 (330)
T ss_pred CCHHHHH
Confidence 7766553
No 187
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7.8e-40 Score=333.47 Aligned_cols=206 Identities=23% Similarity=0.318 Sum_probs=168.0
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-------------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------------- 464 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------------- 464 (629)
++|+++||++.|++ . .+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 2 ~~l~~~~l~~~~~~-~-~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 2 PLLQVSGLSKSYGG-G-KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred ceEEEeeeEEEeCC-c-eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 57999999999963 3 48999999999999999999999999999999999999999999986521
Q ss_pred -------eEEeeccchhcccCCCCCHHHHHhh-----cCC-ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHH
Q psy10512 465 -------RFARYHQHLHELLDLDISPLDYMLQ-----SFP-EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 465 -------~~~~~~q~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 531 (629)
.++|++|.....+....++.+++.. ... .....+.+.++++.+|+.....++++..|||||||||+|
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~l 159 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQI 159 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHH
Confidence 2677777653223334455444321 111 112345678899999996434456789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||+|||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 160 aral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~-~~~~~~~~~ 237 (253)
T TIGR02323 160 ARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVV-ESGLTDQVL 237 (253)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EECCHHHHh
Confidence 99999999999999999999999999999988764 568999999999999999999999999997 467766654
No 188
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.9e-41 Score=329.62 Aligned_cols=200 Identities=25% Similarity=0.407 Sum_probs=152.8
Q ss_pred EEEeEEEEeCC-eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 89 KIANFSITFHG-CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 89 ~i~nls~~y~~-~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
+++|++++|++ +.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +... .
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~---~------- 68 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKP--IKAK---E------- 68 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--hhhH---H-------
Confidence 36899999987 789999999999999999999999999999999999999999998775432 1100 0
Q ss_pred hHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+..+..+.+... ..... +..++....... .. ....++.++++.+|+. +..++++.+|||||||||+||||
T Consensus 69 --~~~~i~~~~q~~~~~~~~~-tv~e~l~~~~~~--~~--~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~lara 140 (205)
T cd03226 69 --RRKSIGYVMQDVDYQLFTD-SVREELLLGLKE--LD--AGNEQAETVLKDLDLY-ALKERHPLSLSGGQKQRLAIAAA 140 (205)
T ss_pred --hhcceEEEecChhhhhhhc-cHHHHHhhhhhh--cC--ccHHHHHHHHHHcCCc-hhcCCCchhCCHHHHHHHHHHHH
Confidence 0000000001000 00011 111111111110 11 1235688999999997 56789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++
T Consensus 141 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 141 LLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999998765 689999999999999999999999999874
No 189
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=332.24 Aligned_cols=214 Identities=25% Similarity=0.369 Sum_probs=162.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+.+.. +.......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--i~~~~~~~------ 74 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVD--IKTIDVID------ 74 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--hhhcChHH------
Confidence 5899999999998899999999999999999999999999999999999999999999876432 11100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+..+....+....+ +. +..++........ .....++.++++.+|+..+..++++.+|||||||||+||||
T Consensus 75 ---~~~~i~~~~q~~~~~-~~-tv~e~l~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~a 145 (241)
T PRK14250 75 ---LRRKIGMVFQQPHLF-EG-TVKDNIEYGPMLK----GEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIART 145 (241)
T ss_pred ---hhhcEEEEecCchhc-hh-hHHHHHhcchhhc----CcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHH
Confidence 000000000110001 11 1111111111100 11235678899999996456788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++..+.+.+.+
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 146 LANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 99999999999999999999999999988653 789999999999999999999999999999887665543
No 190
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.5e-40 Score=330.57 Aligned_cols=202 Identities=25% Similarity=0.372 Sum_probs=169.8
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-------------R 465 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-------------~ 465 (629)
+|+++|+++.|++ ..+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.. .
T Consensus 1 ~l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 1 MIEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred CEEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 4789999999963 348999999999999999999999999999999999999999999987621 3
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|++|... +....++.+++.... ......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|
T Consensus 79 i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~la~al~~~p 155 (240)
T PRK09493 79 AGMVFQQFY--LFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERA-HHYPSELSGGQQQRVAIARALAVKP 155 (240)
T ss_pred eEEEecccc--cCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHH-hcChhhcCHHHHHHHHHHHHHhcCC
Confidence 678888653 334567777654211 1112345678899999997544 5577999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|++.++.
T Consensus 156 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 224 (240)
T PRK09493 156 KLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIA-EDGDPQVLI 224 (240)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eeCCHHHHh
Confidence 999999999999999999999999765 568999999999999999999999999997 568877664
No 191
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-39 Score=330.42 Aligned_cols=203 Identities=24% Similarity=0.430 Sum_probs=171.3
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
++|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 ~~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 1 PILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred CeEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 36899999999963 34899999999999999999999999999999999999999999998763 13
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcCC-------------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHH
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSFP-------------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 532 (629)
++|++|... +....++.+++..... .......+.++++.+|+.... +.++.+|||||+|||+||
T Consensus 79 i~~~~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Ge~qrv~la 155 (242)
T TIGR03411 79 IGRKFQKPT--VFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-DRLAGLLSHGQKQWLEIG 155 (242)
T ss_pred eeEeccccc--cCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHH
Confidence 778887642 3445677776543210 012345678899999997544 567899999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+.+++.
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~-~~~~~~~~~ 230 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVL-AEGSLDQVQ 230 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-eeCCHHHHh
Confidence 9999999999999999999999999999999876 368999999999999999999999999997 578877764
No 192
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1e-39 Score=334.30 Aligned_cols=205 Identities=23% Similarity=0.324 Sum_probs=172.0
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC---ccEEEECCce---------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS---VGMVRKNSHL--------- 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~---~G~i~~~~~~--------- 464 (629)
+++|+++||++.|+. ..+|+++||+|.+||+++|+||||||||||+++|+|+++|+ +|+|.++|..
T Consensus 2 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~ 79 (262)
T PRK09984 2 QTIIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLAR 79 (262)
T ss_pred CcEEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccch
Confidence 358999999999963 34899999999999999999999999999999999999986 4999887631
Q ss_pred -------eEEeeccchhcccCCCCCHHHHHhhcC-------------CChhhHHHHHHHHHHcCCCCcccccCcCcCChh
Q psy10512 465 -------RFARYHQHLHELLDLDISPLDYMLQSF-------------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDG 524 (629)
Q Consensus 465 -------~~~~~~q~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgG 524 (629)
.++|++|... +....++.+++.... .......++.++++.+|+... .++++.+||||
T Consensus 80 ~~~~~~~~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G 156 (262)
T PRK09984 80 DIRKSRANTGYIFQQFN--LVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHF-AHQRVSTLSGG 156 (262)
T ss_pred hHHHHHhheEEEccccc--cccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHH-HhCCccccCHH
Confidence 3678888753 334567777764221 011234567889999999753 45678999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecC
Q psy10512 525 QKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEG 600 (629)
Q Consensus 525 qkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g 600 (629)
|||||+|||||+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ +.|
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~-~~g 235 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVF-YDG 235 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeC
Confidence 999999999999999999999999999999999999999875 468999999999999999999999999996 578
Q ss_pred CHHHHHH
Q psy10512 601 NILDYKE 607 (629)
Q Consensus 601 ~~~~~~~ 607 (629)
+++++.+
T Consensus 236 ~~~~~~~ 242 (262)
T PRK09984 236 SSQQFDN 242 (262)
T ss_pred CHHHhcc
Confidence 8887743
No 193
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.4e-40 Score=335.51 Aligned_cols=225 Identities=25% Similarity=0.387 Sum_probs=163.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +......... ...
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~~~-~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDIT--IDTARSLSQQ-KGL 79 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEE--ccccccccch-hhH
Confidence 4899999999998899999999999999999999999999999999999999999998775432 1110000000 000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
....+..+..+.+....++..+..+++.................++.++++.+|+. ...++++.+|||||||||+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLA-GKETSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-chhhCChhhCChHHHHHHHHHHH
Confidence 00000011111111111111222233221111111222333456788899999997 45788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++++.+ +.++
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~-~~~~ 230 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQG-PAKA 230 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC-CHHH
Confidence 99999999999999999999999999988654 679999999999999999999999999998764 4443
No 194
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-40 Score=338.01 Aligned_cols=206 Identities=25% Similarity=0.314 Sum_probs=169.1
Q ss_pred eEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 399 VIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
.|+++||++.|+... ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 488999999996421 24899999999999999999999999999999999999999999998763
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
..++|++|.....+. ..++.+++... .......+.+.++++.+|+.....++++.+|||||||||+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 160 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLF-EETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGIL 160 (280)
T ss_pred HHHhheEEEeeChhhhhc-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 136888887521222 34777765421 111122345678899999974344567899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 233 (280)
T PRK13649 161 AMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLV-LSGKPKDIF 233 (280)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999999998875 468999999999999999999999999997 467776653
No 195
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.4e-40 Score=329.84 Aligned_cols=197 Identities=25% Similarity=0.321 Sum_probs=164.8
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCC-----CCCccEEEECCce----------
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDL-----TPSVGMVRKNSHL---------- 464 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~-----~p~~G~i~~~~~~---------- 464 (629)
|+++||++.|+. . .+|+++||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+++..
T Consensus 1 i~~~~l~~~~~~-~-~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD-K-HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC-c-eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 478999999964 3 4899999999999999999999999999999999999 9999999987631
Q ss_pred ---eEEeeccchhcccCCCCCHHHHHhhcC-----CCh-hhHHHHHHHHHHcCCCCcccccC-cCcCChhHHHHHHHHHH
Q psy10512 465 ---RFARYHQHLHELLDLDISPLDYMLQSF-----PEV-KDREEMRKIIGRYGLTGRQQVCP-IRQLSDGQKCRVVFAYL 534 (629)
Q Consensus 465 ---~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~-~~~LSgGqkqrv~lAra 534 (629)
.++|++|... +. ..|+.+++.... ... ...+++.++++.+|+.......+ +.+|||||||||+||||
T Consensus 79 ~~~~i~~~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~a 155 (227)
T cd03260 79 LRRRVGMVFQKPN--PF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARA 155 (227)
T ss_pred HHhhEEEEecCch--hc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHH
Confidence 3678888753 22 568877764211 111 12456788999999976544433 58999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCH
Q psy10512 535 AWQAPHLLLLDEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602 (629)
Q Consensus 535 l~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 602 (629)
|+.+|++|||||||++||+.++..+.+.|.++. .|||++|||++++..+||++++|++|+++. .|+.
T Consensus 156 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~ 224 (227)
T cd03260 156 LANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVE-FGPT 224 (227)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEE-ecCc
Confidence 999999999999999999999999999998773 589999999999999999999999999974 4554
No 196
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-40 Score=325.25 Aligned_cols=192 Identities=22% Similarity=0.363 Sum_probs=163.3
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEEee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFARY 469 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~~~ 469 (629)
|+++|+++.|+. . .+|+++||+|.+| +++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 i~~~~~~~~~~~-~-~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 77 (211)
T cd03264 1 LQLENLTKRYGK-K-RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYL 77 (211)
T ss_pred CEEEEEEEEECC-E-EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEe
Confidence 478999999953 3 4899999999999 99999999999999999999999999999998873 347888
Q ss_pred ccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|+.. +....++.+++... .......+.+.++++.+|+.... +.++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llll 154 (211)
T cd03264 78 PQEFG--VYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-KKKIGSLSGGMRRRVGIAQALVGDPSILIV 154 (211)
T ss_pred cCCCc--ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-hCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88753 33456777765321 11112345678899999997544 457799999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 545 DEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
||||+|||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 155 DEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 155 DEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999876 4789999999999999999999999999863
No 197
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.6e-40 Score=327.60 Aligned_cols=197 Identities=26% Similarity=0.328 Sum_probs=164.3
Q ss_pred CCeEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------
Q psy10512 397 PPVIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------- 463 (629)
+++|+++||++.|++.. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 4 ~~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 83 (228)
T PRK10584 4 ENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARA 83 (228)
T ss_pred CceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHH
Confidence 35799999999996422 24899999999999999999999999999999999999999999998762
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYL 534 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 534 (629)
..++|++|... +....++.+++... .......+++.++++.+|+.... .+++.+|||||+|||+||||
T Consensus 84 ~~~~~~i~~~~q~~~--l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Ge~qrl~la~a 160 (228)
T PRK10584 84 KLRAKHVGFVFQSFM--LIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRL-DHLPAQLSGGEQQRVALARA 160 (228)
T ss_pred HHHhheEEEEEcccc--cCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-hCChhhCCHHHHHHHHHHHH
Confidence 24788888753 33456777765321 11112345688999999997543 45779999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 535 AWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 535 l~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|+.+|++|||||||+|||+.+++.+.+.|.++ +.|||++|||.+++. .||++++|++|+++.
T Consensus 161 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 161 FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAA-RCDRRLRLVNGQLQE 226 (228)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEe
Confidence 99999999999999999999999999999664 568999999999985 499999999999863
No 198
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=333.70 Aligned_cols=207 Identities=22% Similarity=0.265 Sum_probs=159.9
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +.... ..+.++.+
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~-~~~~~v~q 77 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKP--VEGPG-AERGVVFQ 77 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--CCCCC-CcEEEEeC
Confidence 3889999999998889999999999999999999999999999999999999999998875432 11100 00111110
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
....++..+..+++ ................++.++++.+|+. ...++++.+|||||||||+||||
T Consensus 78 -------------~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 78 -------------NEGLLPWRNVQDNV-AFGLQLAGVEKMQRLEIAHQMLKKVGLE-GAEKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred -------------CCccCCCCcHHHHH-HhHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhhCChhhCCHHHHHHHHHHHH
Confidence 00011111222222 1111111222333456788999999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEc--CCeEEEEc
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLD--KRKLKYYG 311 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~--~G~i~~~~ 311 (629)
|+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|+ +|+++...
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~ 213 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERL 213 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEe
Confidence 99999999999999999999999999988764 6799999999999999999999998 59988653
No 199
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=336.69 Aligned_cols=202 Identities=21% Similarity=0.282 Sum_probs=157.1
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
..|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|++.+.+.. +..
T Consensus 11 ~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~--~~~---------- 78 (257)
T PRK11247 11 TPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAP--LAE---------- 78 (257)
T ss_pred CcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEE--HHH----------
Confidence 35999999999998899999999999999999999999999999999999999999998764321 100
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
.+..+..+.+....+ +..+..++.... +. .....++.++++.+|+. +..++++.+|||||||||+|||
T Consensus 79 ----~~~~i~~v~q~~~l~-~~~tv~enl~~~--~~----~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGqkqrl~lar 146 (257)
T PRK11247 79 ----AREDTRLMFQDARLL-PWKKVIDNVGLG--LK----GQWRDAALQALAAVGLA-DRANEWPAALSGGQKQRVALAR 146 (257)
T ss_pred ----hhCceEEEecCccCC-CCCcHHHHHHhc--cc----chHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHH
Confidence 000000001111111 111222221111 00 11245678899999996 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++..+
T Consensus 147 aL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~ 216 (257)
T PRK11247 147 ALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDL 216 (257)
T ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999888653 689999999999999999999999999998754
No 200
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-40 Score=367.24 Aligned_cols=205 Identities=27% Similarity=0.481 Sum_probs=175.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccC
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLD 478 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 478 (629)
+|+++|+++.|++ . .+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++...++|++|... +.
T Consensus 1 ml~i~~ls~~~~~-~-~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~--~~ 76 (530)
T PRK15064 1 MLSTANITMQFGA-K-PLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQF--AF 76 (530)
T ss_pred CEEEEEEEEEeCC-c-EeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC--cC
Confidence 4889999999963 3 489999999999999999999999999999999999999999999987777899998753 33
Q ss_pred CCCCHHHHHhhcC----------------C---------------------ChhhHHHHHHHHHHcCCCCcccccCcCcC
Q psy10512 479 LDISPLDYMLQSF----------------P---------------------EVKDREEMRKIIGRYGLTGRQQVCPIRQL 521 (629)
Q Consensus 479 ~~~~~~~~~~~~~----------------~---------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~L 521 (629)
...++.+++.... + ......++.++|+.+|+......+++.+|
T Consensus 77 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~L 156 (530)
T PRK15064 77 EEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEV 156 (530)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhc
Confidence 4456655543110 0 00123467789999999754444578999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCC
Q psy10512 522 SDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGN 601 (629)
Q Consensus 522 SgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 601 (629)
||||||||+||++|+.+|+||||||||+|||+.++..|.+.|.+.+.|||+||||++++..+||+|++|++|+++.+.|+
T Consensus 157 SgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~ 236 (530)
T PRK15064 157 APGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGN 236 (530)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999768899
Q ss_pred HHHHHH
Q psy10512 602 ILDYKE 607 (629)
Q Consensus 602 ~~~~~~ 607 (629)
+++|.+
T Consensus 237 ~~~~~~ 242 (530)
T PRK15064 237 YDEYMT 242 (530)
T ss_pred HHHHHH
Confidence 998864
No 201
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.4e-40 Score=328.88 Aligned_cols=201 Identities=23% Similarity=0.376 Sum_probs=167.8
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEE
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFA 467 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~ 467 (629)
|+++||++.|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 478999999963 34899999999999999999999999999999999999999999998763 2377
Q ss_pred eeccchhcccCCCCCHHHHHhhcC--C---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF--P---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|... +....++.+++.... . .......+.++++.+|+.... .+++.+|||||||||+|||||+.+|++|
T Consensus 79 ~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~ll 155 (232)
T cd03218 79 YLPQEAS--IFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLR-KSKASSLSGGERRRVEIARALATNPKFL 155 (232)
T ss_pred EecCCcc--ccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 8888753 334567777654211 1 112234677899999997544 4677999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||||+|||+.+++.+.+.|+++ +.|||++|||++++..+||++++|++|+++ +.|+.+++.
T Consensus 156 llDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 221 (232)
T cd03218 156 LLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVL-AEGTPEEIA 221 (232)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EEeCHHHhh
Confidence 999999999999999999988765 468999999999999999999999999997 467766553
No 202
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-40 Score=331.22 Aligned_cols=215 Identities=22% Similarity=0.375 Sum_probs=161.6
Q ss_pred EEEEeEEEEeCCe----eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHGC----ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~~----~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++|++++|+++ ++|+++||+|++|++++|+||||||||||+++|+|+++|+.|++.+.+.. +........
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~~-- 77 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTD--LTLLSGKEL-- 77 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--cccCCHHHH--
Confidence 7899999999876 89999999999999999999999999999999999999999999875432 111100000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
...+..+..+.+....++..+..+++ .................+.++++.+|+. +..++++.+|||||+|||+|
T Consensus 78 ----~~~~~~i~~~~q~~~~~~~~t~~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~l 151 (233)
T cd03258 78 ----RKARRRIGMIFQHFNLLSSRTVFENV-ALPLEIAGVPKAEIEERVLELLELVGLE-DKADAYPAQLSGGQKQRVGI 151 (233)
T ss_pred ----HHHHhheEEEccCcccCCCCcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhcChhhCCHHHHHHHHH
Confidence 00001111111111111111222222 2111111222233455788999999996 56788999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++++.+.
T Consensus 152 a~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 224 (233)
T cd03258 152 ARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGT 224 (233)
T ss_pred HHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999988754 6799999999999999999999999999987643
No 203
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.1e-40 Score=325.77 Aligned_cols=192 Identities=27% Similarity=0.406 Sum_probs=161.6
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------ee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------LR 465 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------~~ 465 (629)
|+++|+++.|+.+ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4689999999533 34899999999999999999999999999999999999999999988763 13
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|... +....++.+++... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|+
T Consensus 80 i~~v~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~ 156 (214)
T cd03292 80 IGVVFQDFR--LLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-RALPAELSGGEQQRVAIARAIVNSPT 156 (214)
T ss_pred eEEEecCch--hccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-hCChhhcCHHHHHHHHHHHHHHcCCC
Confidence 678888753 33456777765421 11112345678899999997543 45779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
+|||||||++||+.++..+.+.|.++ +.|||+||||.+++..+||++++|++|++
T Consensus 157 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 157 ILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999876 46899999999999999999999999974
No 204
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=313.99 Aligned_cols=202 Identities=23% Similarity=0.312 Sum_probs=166.4
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCc-----cEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSV-----GMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~-----G~i~~~~~-------- 463 (629)
.+.++++||++.|+. ..+|++||+.|+++.++|||||+|||||||||++..+..... |+|.++|.
T Consensus 5 ~~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 5 IPAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred cceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 457899999999974 348999999999999999999999999999999999988765 89988763
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
.++|.++|.+. .+.+++++++..+. ....-++.++..|....|=+ +..+++...||||||||+|
T Consensus 83 ~~~lRr~vGMVFQkPn---PFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLc 159 (253)
T COG1117 83 VVELRRRVGMVFQKPN---PFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLC 159 (253)
T ss_pred HHHHHHHheeeccCCC---CCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHH
Confidence 35888999875 24478888876432 11223455666666665521 2233466789999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
|||||+.+|+|||||||||+|||.+...+.++|.+++ -|||+|||++..+.+++|+++++..|++++| |+.+.
T Consensus 160 IARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~-g~T~~ 234 (253)
T COG1117 160 IARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF-GPTDK 234 (253)
T ss_pred HHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE-cCHHh
Confidence 9999999999999999999999999999999998885 5999999999999999999999999999986 44433
No 205
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.4e-40 Score=324.75 Aligned_cols=192 Identities=23% Similarity=0.375 Sum_probs=164.2
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 78 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALI 78 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEec
Confidence 478999999953 35999999999999999999999999999999999999999999999874 2477888
Q ss_pred cchhcccCCCCCHHHHHhhc--CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCC
Q psy10512 471 QHLHELLDLDISPLDYMLQS--FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPT 548 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT 548 (629)
|... +....|+.+++... ... ...+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||
T Consensus 79 q~~~--~~~~~tv~e~l~~~~~~~~-~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt 154 (208)
T cd03268 79 EAPG--FYPNLTARENLRLLARLLG-IRKKRIDEVLDVVGLKDSA-KKKVKGFSLGMKQRLGIALALLGNPDLLILDEPT 154 (208)
T ss_pred CCCc--cCccCcHHHHHHHHHHhcC-CcHHHHHHHHHHcCCHHHH-hhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 8753 34456887775432 111 2345678899999997544 4577999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 549 NHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 549 ~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
++||+.+++.+.+.|.++ +.+||+||||++++..+||++++|++|+++.
T Consensus 155 ~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 155 NGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999998765 5689999999999999999999999999863
No 206
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-40 Score=332.18 Aligned_cols=219 Identities=25% Similarity=0.339 Sum_probs=161.3
Q ss_pred EEEEeEEEEeCC-eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 88 VKIANFSITFHG-CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 88 i~i~nls~~y~~-~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
|+++||+++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~~----- 73 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTD--INKLKGKAL----- 73 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEe--ccccCHhHH-----
Confidence 468999999987 789999999999999999999999999999999999999999998875432 111000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh--------hhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD--------RLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWR 238 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqr 238 (629)
...+..+..+.+....++..+..+++ .... .+.........+++.++++.+|+. ...++++.+||||||
T Consensus 74 -~~~~~~i~~~~q~~~~~~~~tv~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~ 150 (241)
T cd03256 74 -RQLRRQIGMIFQQFNLIERLSVLENV-LSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLL-DKAYQRADQLSGGQQ 150 (241)
T ss_pred -HHHHhccEEEcccCcccccCcHHHHH-HhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCCh-hhhCCCcccCCHHHH
Confidence 00001111111111111111222222 1110 000111123345788899999996 567889999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
|||+|||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++..+ +.
T Consensus 151 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~-~~ 229 (241)
T cd03256 151 QRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG-PP 229 (241)
T ss_pred HHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec-CH
Confidence 9999999999999999999999999999999999988754 689999999999999999999999999998764 44
Q ss_pred HHH
Q psy10512 315 EAF 317 (629)
Q Consensus 315 ~~~ 317 (629)
+.+
T Consensus 230 ~~~ 232 (241)
T cd03256 230 AEL 232 (241)
T ss_pred HHh
Confidence 443
No 207
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.5e-40 Score=327.51 Aligned_cols=209 Identities=24% Similarity=0.337 Sum_probs=155.7
Q ss_pred EEEEeEEEEe-CCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 88 VKIANFSITF-HGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 88 i~i~nls~~y-~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
|+++|++++| +++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 2 l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~--~~~~~~~~~----- 74 (214)
T TIGR02673 2 IEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGED--VNRLRGRQL----- 74 (214)
T ss_pred EEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--cccCCHHHH-----
Confidence 7899999999 46789999999999999999999999999999999999999999998775422 111000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+..+..+.+....++.. +..++.................++.++++.+|+. +..++.+.+|||||+|||+||||
T Consensus 75 -~~~~~~i~~~~q~~~~~~~~-tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 75 -PLLRRRIGVVFQDFRLLPDR-TVYENVALPLEVRGKKEREIQRRVGAALRQVGLE-HKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred -HHHHhheEEEecChhhccCC-cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHH
Confidence 00000011111111111111 2222222111111122333456788999999997 56788899999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCe
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRK 306 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~ 306 (629)
|+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999988764 6899999999999999999999999884
No 208
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=335.18 Aligned_cols=229 Identities=25% Similarity=0.368 Sum_probs=164.9
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+............+ ....
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~-~~~~ 83 (257)
T PRK10619 5 KLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL-KVAD 83 (257)
T ss_pred cEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc-cccc
Confidence 499999999999999999999999999999999999999999999999999999999887543211000000000 0000
Q ss_pred c---hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 167 V---DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 167 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
. ...+..+..+.++...++..+..+++......+..........++.++++.+|+.....++++.+|||||||||+|
T Consensus 84 ~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~l 163 (257)
T PRK10619 84 KNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSI 163 (257)
T ss_pred chHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHH
Confidence 0 0000011111111111111122233221111111223334556788999999997444478899999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++++. |+++.+
T Consensus 164 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~ 239 (257)
T PRK10619 164 ARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE-GAPEQL 239 (257)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe-CCHHHh
Confidence 99999999999999999999999999999987654 68999999999999999999999999999976 455443
No 209
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=333.96 Aligned_cols=206 Identities=24% Similarity=0.311 Sum_probs=172.5
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------e
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------L 464 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~ 464 (629)
.+++|+++||++.|++ . .+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 8 ~~~~l~i~~l~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 8 SDTTFALRNVSFRVPG-R-TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CCceEEEeeEEEEECC-E-EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 4568999999999963 3 4899999999999999999999999999999999999999999998873 2
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcC---------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSF---------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
.++|++|... +....++.+++.... ......+.+..+++.+++... .++++.+|||||+|||+|||||
T Consensus 86 ~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~laral 162 (265)
T PRK10575 86 KVAYLPQQLP--AAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPL-AHRLVDSLSGGERQRAWIAMLV 162 (265)
T ss_pred heEEeccCCC--CCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-hcCCcccCCHHHHHHHHHHHHH
Confidence 4788888743 334567777764321 011234567889999999754 3457799999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+.+|+||||||||+|||+.++..+.+.|.++ +.+||+||||++++..+||+|++|++|+++ ..|+.+++..
T Consensus 163 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~-~~~~~~~~~~ 237 (265)
T PRK10575 163 AQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMI-AQGTPAELMR 237 (265)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHhcC
Confidence 9999999999999999999999999988765 568999999999999999999999999997 4677766643
No 210
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-39 Score=328.40 Aligned_cols=202 Identities=28% Similarity=0.427 Sum_probs=168.6
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEEe
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFAR 468 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~~ 468 (629)
+|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 1 ALEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred CEEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 4789999999963 34899999999999999999999999999999999999999999998763 24778
Q ss_pred eccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 469 YHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
++|... +....++.+++... .......+.+.++++.+|+.... .+++.+|||||+|||+|||||+.+|++||
T Consensus 79 ~~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~laral~~~p~lll 155 (236)
T TIGR03864 79 VFQQPT--LDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERA-DDKVRELNGGHRRRVEIARALLHRPALLL 155 (236)
T ss_pred eCCCCC--CcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-cCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 888753 33456777765321 11112345678899999997544 45779999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||++||+.+++.+.+.|.++ +.|||+||||++++.. ||++++|++|+++ ..|+.+++..
T Consensus 156 lDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~-~~~~~~~~~~ 221 (236)
T TIGR03864 156 LDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVL-ADGAAAELRG 221 (236)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEE-EeCCHHHHHH
Confidence 99999999999999999998765 4689999999999975 9999999999997 4677766644
No 211
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=329.37 Aligned_cols=201 Identities=22% Similarity=0.332 Sum_probs=167.6
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
.|+++|+++.|++ . .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 3 ~l~~~~l~~~~~~-~-~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG-K-EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC-e-eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 5899999999953 3 4899999999999999999999999999999999999999999998763 2478
Q ss_pred eeccchhcccCCCCCHHHHHhhcCC-ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFP-EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
|++|... .+ ..++.+++..... ......++.++++.+|+......+++.+|||||+|||+|||||+.+|++|||||
T Consensus 81 ~~~q~~~-~~--~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDE 157 (241)
T PRK14250 81 MVFQQPH-LF--EGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDE 157 (241)
T ss_pred EEecCch-hc--hhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 8888753 22 2477776542211 112245678899999996333456789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 547 PTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
||+|||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+..++
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 219 (241)
T PRK14250 158 PTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVE-YAKTYDF 219 (241)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEE-eCCHHHH
Confidence 99999999999999988764 5799999999999999999999999999974 5666554
No 212
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-40 Score=331.89 Aligned_cols=213 Identities=24% Similarity=0.346 Sum_probs=161.8
Q ss_pred EEEEeEEEEeCC-eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 88 VKIANFSITFHG-CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 88 i~i~nls~~y~~-~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
|+++|++++|++ +.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +.......
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~------ 72 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGED--IREQDPVE------ 72 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeE--cCcCChHH------
Confidence 468999999988 789999999999999999999999999999999999999999998775432 11100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc-hhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK-EMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~-~~~~~~~~~LSGGqrqRv~LAr 245 (629)
.+..+..+.+....++..+..+++ .....+.........+++.++++.+|+.. ...++++.+|||||+|||+|||
T Consensus 73 ---~~~~i~~~~q~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 73 ---LRRKIGYVIQQIGLFPHMTVEENI-ALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVAR 148 (242)
T ss_pred ---hhcceEEEccCccccCCCcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHH
Confidence 000111111111111112222222 22212222233344567889999999974 3678999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..+.
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 219 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGT 219 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999988764 6799999999999999999999999999987643
No 213
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.6e-40 Score=330.44 Aligned_cols=213 Identities=25% Similarity=0.332 Sum_probs=157.3
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCC-----CCCCCceEEEeecccCCCCCcchhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNRE-----VPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~-----~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
|+++||+++|+++++|+|+||+|++|++++|+||||||||||+++|+|++ +|.+|++.+.+.. +.......
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~--~~~~~~~~-- 76 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKD--IYDLDVDV-- 76 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEE--hhhcchHH--
Confidence 57899999999889999999999999999999999999999999999999 8999998775432 11000000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccCh-hhHHHHHHHHHHhCCCCchhhhcc--cCCCChHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISA-DTAEARAANILHGLGFTKEMQQKK--TKDFSGGWRM 239 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~~~~~~~~--~~~LSGGqrq 239 (629)
...+..+..+.+....+ ..+..+++ ........... .....++.++++.+|+.. ..++. +.+|||||||
T Consensus 77 -----~~~~~~i~~~~q~~~~~-~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~LSgG~~q 148 (227)
T cd03260 77 -----LELRRRVGMVFQKPNPF-PGSIYDNV-AYGLRLHGIKLKEELDERVEEALRKAALWD-EVKDRLHALGLSGGQQQ 148 (227)
T ss_pred -----HHHHhhEEEEecCchhc-cccHHHHH-HhHHHhcCCCcHHHHHHHHHHHHHHcCCCh-HHhccCCcccCCHHHHH
Confidence 00000000011111111 11222222 11111111111 224567889999999974 44555 5999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--CEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYK--RILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~--~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+|||||+.+|++|||||||++||+.++.++.+.|+++. .|||+||||++++..+||++++|++|++++++.
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999997763 699999999999999999999999999987654
No 214
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-40 Score=344.67 Aligned_cols=230 Identities=20% Similarity=0.263 Sum_probs=165.0
Q ss_pred eeEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcch
Q psy10512 86 RDVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 86 ~~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
..|+++|++++|++ .++|+|+||+|++|+++||+|+||||||||+++|+|++.|++|+|.+.+....-.......
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 35999999999974 3599999999999999999999999999999999999999999998864321100000000
Q ss_pred hhhh-----hhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCC
Q psy10512 161 LTCV-----MEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFS 234 (629)
Q Consensus 161 ~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 234 (629)
.... ......+..+..+.++.. .....+..+++ .+..........+...++.++++.+|+.....++.+.+||
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni-~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LS 178 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDI-MFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLS 178 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHH-HhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCC
Confidence 0000 000000111111111110 01111222222 1111111223344556788999999996456789999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 235 GGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
|||||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..|
T Consensus 179 gGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g 258 (320)
T PRK13631 179 GGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTG 258 (320)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999988654 689999999999999999999999999999876
Q ss_pred CcHHH
Q psy10512 312 GNYEA 316 (629)
Q Consensus 312 g~~~~ 316 (629)
.+.+.
T Consensus 259 ~~~~~ 263 (320)
T PRK13631 259 TPYEI 263 (320)
T ss_pred CHHHH
Confidence 55443
No 215
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=335.96 Aligned_cols=205 Identities=23% Similarity=0.362 Sum_probs=170.3
Q ss_pred CeEEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 398 PVIMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
++|+++||++.|+.. ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 3 NIIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred ceEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhh
Confidence 378999999999632 234899999999999999999999999999999999999999999998773 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.+.. .....++.+++... .......+.+.++++.+||.+.. ++++.+|||||+|||+|||||+.+|+
T Consensus 83 i~~v~q~~~~-~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGq~qrv~lAral~~~p~ 160 (279)
T PRK13650 83 IGMVFQNPDN-QFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFK-EREPARLSGGQKQRVAIAGAVAMRPK 160 (279)
T ss_pred ceEEEcChHH-hcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHh-hCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7888887532 22345777776432 11112345678899999997544 56779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||||++||+.++..+.+.|.++ +.|||+||||++++ .+||+|++|++|+++ ..|+.+++.
T Consensus 161 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~-~~~dri~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13650 161 IIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEV-ALSDRVLVMKNGQVE-STSTPRELF 228 (279)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH-HhCCEEEEEECCEEE-EECCHHHHH
Confidence 99999999999999999999998765 56899999999999 479999999999997 467776653
No 216
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=331.77 Aligned_cols=204 Identities=23% Similarity=0.408 Sum_probs=169.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------------ 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------------ 464 (629)
.++|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (255)
T PRK11300 3 QPLLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARM 80 (255)
T ss_pred CceEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhc
Confidence 357999999999953 348999999999999999999999999999999999999999999987631
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcC------------------CC--hhhHHHHHHHHHHcCCCCcccccCcCcCChh
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSF------------------PE--VKDREEMRKIIGRYGLTGRQQVCPIRQLSDG 524 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~------------------~~--~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgG 524 (629)
.++|++|... +....++.+++.... .. ......+.++++.+|+... .++++.+||||
T Consensus 81 ~i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LS~G 157 (255)
T PRK11300 81 GVVRTFQHVR--LFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEH-ANRQAGNLAYG 157 (255)
T ss_pred CeEEeccCcc--cCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhh-hhCChhhCCHH
Confidence 3667777643 344567777654210 00 0122457788999999754 45678999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecC
Q psy10512 525 QKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEG 600 (629)
Q Consensus 525 qkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g 600 (629)
|||||+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ +.|
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~ 236 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPL-ANG 236 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-ecC
Confidence 999999999999999999999999999999999999998764 568999999999999999999999999997 567
Q ss_pred CHHHHH
Q psy10512 601 NILDYK 606 (629)
Q Consensus 601 ~~~~~~ 606 (629)
+.+++.
T Consensus 237 ~~~~~~ 242 (255)
T PRK11300 237 TPEEIR 242 (255)
T ss_pred CHHHHh
Confidence 776654
No 217
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3e-40 Score=326.57 Aligned_cols=204 Identities=29% Similarity=0.363 Sum_probs=156.8
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|++.+.+.. +... .
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~--~-------- 68 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKS--YQKN--I-------- 68 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCc--ccch--H--------
Confidence 478999999998899999999999999999999999999999999999999999998875421 1100 0
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..+..+..+.+... ..+..+..++...+...... ...++.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 69 -~~~~~i~~~~q~~~-~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al 141 (208)
T cd03268 69 -EALRRIGALIEAPG-FYPNLTARENLRLLARLLGI----RKKRIDEVLDVVGLK-DSAKKKVKGFSLGMKQRLGIALAL 141 (208)
T ss_pred -HHHhhEEEecCCCc-cCccCcHHHHHHHHHHhcCC----cHHHHHHHHHHcCCH-HHHhhhHhhCCHHHHHHHHHHHHH
Confidence 00000111111111 11112222222222111111 245678899999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
+.+|++|||||||++||+.++..+++.|.++ +.|+|+||||++++..+||++++|++|++++.
T Consensus 142 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~ 207 (208)
T cd03268 142 LGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEE 207 (208)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEec
Confidence 9999999999999999999999999988764 68999999999999999999999999998754
No 218
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.6e-40 Score=333.90 Aligned_cols=219 Identities=24% Similarity=0.327 Sum_probs=160.7
Q ss_pred EEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 88 VKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 88 i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
|+++|++++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +........
T Consensus 2 l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~~----- 74 (243)
T TIGR02315 2 LEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTD--ITKLRGKKL----- 74 (243)
T ss_pred eEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEE--hhhCCHHHH-----
Confidence 78999999998 7789999999999999999999999999999999999999999998875432 110000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh-------hhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD-------RLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRM 239 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrq 239 (629)
...+..+..+.+....++..+..+++..... .+..........++.++++.+|+. ...++++.+|||||||
T Consensus 75 -~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~q 152 (243)
T TIGR02315 75 -RKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-DKAYQRADQLSGGQQQ 152 (243)
T ss_pred -HHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHH
Confidence 0000111111111111111122222211000 000111123346788899999996 5678899999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+ +.+
T Consensus 153 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~-~~~ 231 (243)
T TIGR02315 153 RVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG-APS 231 (243)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC-CHH
Confidence 999999999999999999999999999999999988754 579999999999999999999999999998654 444
Q ss_pred H
Q psy10512 316 A 316 (629)
Q Consensus 316 ~ 316 (629)
.
T Consensus 232 ~ 232 (243)
T TIGR02315 232 E 232 (243)
T ss_pred H
Confidence 3
No 219
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=335.83 Aligned_cols=203 Identities=26% Similarity=0.345 Sum_probs=166.8
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-------------R 465 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-------------~ 465 (629)
||+++||++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. .
T Consensus 1 ml~~~~l~~~~~~-~-~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 1 MLATSDLWFRYQD-E-PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred CeEEEEEEEEcCC-c-ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 5889999999963 3 48999999999999999999999999999999999999999999887631 3
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.....+ ...++.+++... .......+.+.++++.+|+.+.. ++++.+|||||||||+|||||+.+|+
T Consensus 79 i~~v~q~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~laraL~~~p~ 156 (271)
T PRK13638 79 VATVFQDPEQQI-FYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-HQPIQCLSHGQKKRVAIAGALVLQAR 156 (271)
T ss_pred eEEEeeChhhcc-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-cCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 678888753212 223454443221 11112234567899999997544 46789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 157 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 224 (271)
T PRK13638 157 YLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQIL-THGAPGEVF 224 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999999876 468999999999999999999999999997 467776653
No 220
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-39 Score=330.94 Aligned_cols=202 Identities=27% Similarity=0.451 Sum_probs=168.6
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhccc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELL 477 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~ 477 (629)
++|+++||++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++...++|++|+.....
T Consensus 3 ~~l~~~~l~~~~~~-~-~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~~~i~~v~q~~~~~~ 80 (251)
T PRK09544 3 SLVSLENVSVSFGQ-R-RVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGKLRIGYVPQKLYLDT 80 (251)
T ss_pred cEEEEeceEEEECC-c-eEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCccCEEEecccccccc
Confidence 47999999999963 3 489999999999999999999999999999999999999999999988778999999853222
Q ss_pred CCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHH
Q psy10512 478 DLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETID 557 (629)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~ 557 (629)
....++.+++.. .+. ...+++..+++.+|+.... ++++.+|||||+|||+|||||+.+|++|||||||+|||+.++.
T Consensus 81 ~l~~~~~~~~~~-~~~-~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~ 157 (251)
T PRK09544 81 TLPLTVNRFLRL-RPG-TKKEDILPALKRVQAGHLI-DAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQV 157 (251)
T ss_pred ccChhHHHHHhc-ccc-ccHHHHHHHHHHcCChHHH-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHH
Confidence 222345554422 111 2345678899999997544 4578999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 558 ALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 558 ~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
.+.+.|.++ +.|||+||||++++..+||+|++|++ +++ ..|+++++.
T Consensus 158 ~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~-~~g~~~~~~ 208 (251)
T PRK09544 158 ALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HIC-CSGTPEVVS 208 (251)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceE-eeCCHHHHh
Confidence 999998764 56899999999999999999999965 665 467776653
No 221
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=330.96 Aligned_cols=224 Identities=25% Similarity=0.367 Sum_probs=164.7
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCC-CCcchhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPA-SDKSALTCV 164 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~-~~~~~~~~~ 164 (629)
|+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|++.+.+....... ......
T Consensus 1 ~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~--- 77 (242)
T PRK11124 1 MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI--- 77 (242)
T ss_pred CEEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhH---
Confidence 3589999999999889999999999999999999999999999999999999999999887543210000 000000
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
...+..+..+.+....++..+..+++.................++.++++.+|+. ...++.+.+|||||||||+||
T Consensus 78 ---~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~la 153 (242)
T PRK11124 78 ---RELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLK-PYADRFPLHLSGGQQQRVAIA 153 (242)
T ss_pred ---HHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHH
Confidence 0000011111111111111122222211111111122233456788999999996 567899999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|||+.+|+||||||||++||+.++.++.+.|+++ +.|+|+||||++++..+||++++|++|++++. ++++.+
T Consensus 154 ral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~-~~~~~~ 228 (242)
T PRK11124 154 RALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQ-GDASCF 228 (242)
T ss_pred HHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe-CCHHHh
Confidence 9999999999999999999999999999988754 68999999999999999999999999999865 455543
No 222
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=346.38 Aligned_cols=205 Identities=25% Similarity=0.315 Sum_probs=174.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEE
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFA 467 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~ 467 (629)
.++|+++|+++.|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+.+|++|+|.+++. ..++
T Consensus 17 ~~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 17 TPLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred CceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 468999999999953 34899999999999999999999999999999999999999999998874 2588
Q ss_pred eeccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
|++|+.. +...+|+.+++.... +.....+++.++++.+||.+.. ++++.+|||||||||+|||||+.+|++|
T Consensus 95 ~vfQ~~~--lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-~~~~~~LSgGq~QRVaLARAL~~~P~lL 171 (377)
T PRK11607 95 MMFQSYA--LFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-KRKPHQLSGGQRQRVALARSLAKRPKLL 171 (377)
T ss_pred EEeCCCc--cCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999864 556778888875332 1122345778999999998654 4577999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhh----cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 543 LLDEPTNHLDMETIDALADAIND----FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~----~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||||++||+.+++.+.+.|.+ .+.|+|+||||.+++..+||+|++|++|+++ ..|+++++..
T Consensus 172 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~-~~g~~~~~~~ 239 (377)
T PRK11607 172 LLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFV-QIGEPEEIYE 239 (377)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEE-EEcCHHHHHh
Confidence 99999999999999888766544 4679999999999999999999999999997 4688776543
No 223
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.1e-40 Score=302.24 Aligned_cols=200 Identities=26% Similarity=0.373 Sum_probs=168.9
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce---------eEEee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL---------RFARY 469 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~---------~~~~~ 469 (629)
+|.+++|.+.|+. .--.++++|..||+++|+||+||||||||++|+|+..|.+|+|++++.. .+..+
T Consensus 1 ~l~L~~V~~~y~~----~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 1 MLALDDVRFSYGH----LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred CccccceEEeeCc----ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 4678999999953 2246789999999999999999999999999999999999999998742 24455
Q ss_pred ccchhcccCCCCCHHHHHhhcCC-----ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQSFP-----EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|.. ++...+++.+++..+.. ....++.+..++.++||.+...+ .+.+|||||||||+|||+|+++-+||+|
T Consensus 77 FQEn--NLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~R-LP~~LSGGqRQRvALARclvR~~PilLL 153 (231)
T COG3840 77 FQEN--NLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKR-LPGELSGGQRQRVALARCLVREQPILLL 153 (231)
T ss_pred hhcc--ccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhh-CccccCchHHHHHHHHHHHhccCCeEEe
Confidence 6653 34556777777755432 12467789999999999987765 4589999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+++|||.-+.++..++.++ +.|++||||..+.+.+++++++++++|+|. |.|+.+++.
T Consensus 154 DEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g~~~~~~ 218 (231)
T COG3840 154 DEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQGSTQELL 218 (231)
T ss_pred cCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eeccHHHHh
Confidence 9999999999999999888765 569999999999999999999999999996 788876654
No 224
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.2e-40 Score=345.69 Aligned_cols=220 Identities=18% Similarity=0.282 Sum_probs=164.9
Q ss_pred eeEEEEeEEEEeCC-------------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeeccc
Q psy10512 86 RDVKIANFSITFHG-------------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTRE 152 (629)
Q Consensus 86 ~~i~i~nls~~y~~-------------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~ 152 (629)
.+|+++||+++|+. ..+|+||||+|++||++||+|+||||||||+++|+|++.|++|+|.+.+. +
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~--~ 84 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGK--D 84 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCE--E
Confidence 36999999999962 46999999999999999999999999999999999999999999877543 2
Q ss_pred CCCCCcchhhhhhhchHHHHHHHHHHHHH--hccCChhHHHHHHHHHhhhh-ccChhhHHHHHHHHHHhCCCCchhhhcc
Q psy10512 153 MPASDKSALTCVMEVDEERVRLEKLAEQL--VACEDDESQEQLMDIYDRLD-DISADTAEARAANILHGLGFTKEMQQKK 229 (629)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~ 229 (629)
+........ ...+..+.+++++. ...+..+..+++........ .+...+...++.++|+.+|+..+..+++
T Consensus 85 i~~~~~~~~------~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~ 158 (331)
T PRK15079 85 LLGMKDDEW------RAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRY 158 (331)
T ss_pred CCcCCHHHH------HHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCC
Confidence 211100000 00001111111211 11111222222222111111 2344455677889999999965678999
Q ss_pred cCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCC
Q psy10512 230 TKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKR 305 (629)
Q Consensus 230 ~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G 305 (629)
+.+|||||+|||+|||||+.+|+||||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|.+|
T Consensus 159 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G 238 (331)
T PRK15079 159 PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLG 238 (331)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999887653 689999999999999999999999999
Q ss_pred eEEEEcCc
Q psy10512 306 KLKYYGGN 313 (629)
Q Consensus 306 ~i~~~~g~ 313 (629)
++++.+..
T Consensus 239 ~ive~g~~ 246 (331)
T PRK15079 239 HAVELGTY 246 (331)
T ss_pred EEEEEcCH
Confidence 99987644
No 225
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=8.8e-40 Score=326.49 Aligned_cols=200 Identities=25% Similarity=0.398 Sum_probs=165.8
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEE
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFA 467 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~ 467 (629)
|+++||++.|+. . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK-S-QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC-e-eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 478999999963 3 4899999999999999999999999999999999999999999998762 2378
Q ss_pred eeccchhcccCCCCCHHHHHhhcC--C-ChhhHHHHHHHHHHc-CCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF--P-EVKDREEMRKIIGRY-GLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~-gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
|++|... +....++.+++.... . .......+..+++.+ ++... .++++.+|||||||||+|||||+.+|++||
T Consensus 79 ~~~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~~~~LS~G~~qrv~laral~~~p~lll 155 (222)
T cd03224 79 YVPEGRR--IFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLKER-RKQLAGTLSGGEQQMLAIARALMSRPKLLL 155 (222)
T ss_pred Eeccccc--cCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhhhh-hhCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8888753 344567777664321 1 112344566788888 46543 356789999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+.+++
T Consensus 156 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 219 (222)
T cd03224 156 LDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVV-LEGTAAEL 219 (222)
T ss_pred ECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEE-EeCCHHHH
Confidence 99999999999999999999875 468999999999999999999999999997 46766554
No 226
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.5e-40 Score=341.72 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=164.6
Q ss_pred EEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------eeEEeeccchhccc
Q psy10512 408 RYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------LRFARYHQHLHELL 477 (629)
Q Consensus 408 ~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~~~~~~q~~~~~~ 477 (629)
.|++ ..+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.+++. ..++|++|... +
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~--~ 77 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYAS--V 77 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCC--C
Confidence 5642 34899999999999999999999999999999999999999999998773 24788888753 4
Q ss_pred CCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCC
Q psy10512 478 DLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLD 552 (629)
Q Consensus 478 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD 552 (629)
...+|+.+++... .......+++.++++.+||... .++++.+|||||||||+||+||+.+|++|||||||+|||
T Consensus 78 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD 156 (302)
T TIGR01188 78 DEDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEA-ADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLD 156 (302)
T ss_pred CCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-hCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCC
Confidence 4567887765421 1111234567889999999754 456789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 553 METIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 553 ~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
+.++..+++.|.++ +.|||++|||++++..+||+|++|++|+++ +.|+++++.+.
T Consensus 157 ~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~l~~~ 214 (302)
T TIGR01188 157 PRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRII-AEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHHh
Confidence 99999999999876 468999999999999999999999999997 47888776543
No 227
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=338.62 Aligned_cols=217 Identities=24% Similarity=0.333 Sum_probs=161.3
Q ss_pred eEEEEeEEEEeCC-----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCc-ch
Q psy10512 87 DVKIANFSITFHG-----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDK-SA 160 (629)
Q Consensus 87 ~i~i~nls~~y~~-----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~-~~ 160 (629)
.|+++||+++|++ .++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+.+.. +..... ..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~--i~~~~~~~~ 79 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTL--ITSTSKNKD 79 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--ccccccccC
Confidence 4899999999975 369999999999999999999999999999999999999999999875432 111000 00
Q ss_pred hhhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRM 239 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrq 239 (629)
. ...+..+..+.+... ...+.+..+++ .+..............++.++++.+|+.....++++.+|||||||
T Consensus 80 ~------~~~~~~i~~~~q~~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 80 I------KQIRKKVGLVFQFPESQLFEETVLKDV-AFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMR 152 (280)
T ss_pred H------HHHHhheEEEeeChhhhhccccHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHH
Confidence 0 000000111111100 01111222222 211111122233445567889999999645678899999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++.++.
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGK 228 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999988765 6799999999999999999999999999987654
No 228
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-40 Score=309.68 Aligned_cols=221 Identities=22% Similarity=0.281 Sum_probs=168.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++..++.+|+++||++.+||+.+||||||||||||||.|+|.+.|++|.+.+++..-.. ...
T Consensus 1 mi~a~nls~~~~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~--~~~-------- 70 (259)
T COG4559 1 MIRAENLSYSLAGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNS--WPP-------- 70 (259)
T ss_pred CeeeeeeEEEeecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhh--CCH--------
Confidence 4889999999999999999999999999999999999999999999999999999999886533211 000
Q ss_pred chHHHHHHHHHHHH-HhccCChhHHHHHHHHHhhhhcc--ChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQ-LVACEDDESQEQLMDIYDRLDDI--SADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
........+..+ -...++.+. .++..+...-... ...+..+.+..+|...++. .+..+...+|||||||||.|
T Consensus 71 --~~lA~~raVlpQ~s~laFpFtv-~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~-~la~R~y~~LSGGEqQRVql 146 (259)
T COG4559 71 --EELARHRAVLPQNSSLAFPFTV-QEVVQMGRIPHRSGREPEEDERIAAQALAATDLS-GLAGRDYRTLSGGEQQRVQL 146 (259)
T ss_pred --HHHHHHhhhcccCcccccceEH-HHHHHhcccccccCCCchhhHHHHHHHHHHcChh-hhhccchhhcCchHHHHHHH
Confidence 010111111111 111122222 2222221111111 1224555688899999996 57889999999999999999
Q ss_pred HHHHcc------CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 244 ARALYV------KPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 244 AraL~~------~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
||+|++ ++++|+||||||+||+..+..+++..+++ +..|+.|-||++.+..|||||++|++|++++.|.+.
T Consensus 147 ARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 147 ARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred HHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 999986 34599999999999999999988887766 678999999999999999999999999999999998
Q ss_pred HHHHHHH
Q psy10512 315 EAFCKTR 321 (629)
Q Consensus 315 ~~~~~~~ 321 (629)
+.+..+.
T Consensus 227 ~vlt~Et 233 (259)
T COG4559 227 DVLTDET 233 (259)
T ss_pred HhcCHHH
Confidence 8876644
No 229
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=329.54 Aligned_cols=203 Identities=19% Similarity=0.323 Sum_probs=170.3
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~ 466 (629)
+|+++|+++.|++ ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 6899999999963 34899999999999999999999999999999999999999999998762 247
Q ss_pred EeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+|++|... +....++.+++.... ........+.++++.+|+.... +.++.+|||||+|||+|||||+.+|+
T Consensus 81 ~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~ 157 (241)
T PRK10895 81 GYLPQEAS--IFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLR-DSMGQSLSGGERRRVEIARALAANPK 157 (241)
T ss_pred EEeccCCc--ccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHh-hcchhhCCHHHHHHHHHHHHHhcCCC
Confidence 88888753 334467777654321 1112245678899999997543 45779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+++++.+
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 226 (241)
T PRK10895 158 FILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLI-AHGTPTEILQ 226 (241)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEE-eeCCHHHHhc
Confidence 99999999999999999998888654 568999999999999999999999999997 4788777643
No 230
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.9e-40 Score=343.12 Aligned_cols=204 Identities=21% Similarity=0.367 Sum_probs=157.6
Q ss_pred EEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchHHHHHH
Q psy10512 95 ITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRL 174 (629)
Q Consensus 95 ~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (629)
++|+++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|++.+.+.. +... .. ..+..+
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~-~~---------~~~~~i 68 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYD--VVRE-PR---------KVRRSI 68 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--cccC-HH---------HHHhhc
Confidence 46888899999999999999999999999999999999999999999999875432 1110 00 001111
Q ss_pred HHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHccCCCEE
Q psy10512 175 EKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLL 254 (629)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iL 254 (629)
..+.+... ..+..+..++...+..+..........++.++++.+|+. +..++++.+|||||||||+|||||+.+|++|
T Consensus 69 ~~~~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~la~al~~~p~ll 146 (302)
T TIGR01188 69 GIVPQYAS-VDEDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELG-EAADRPVGTYSGGMRRRLDIAASLIHQPDVL 146 (302)
T ss_pred EEecCCCC-CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhCCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 11111111 112223333333322222333344556788999999996 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 255 LLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 255 LLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||||||++||+.++.++++.|+++ +.|||++|||++++..+||+|++|++|+++..+.
T Consensus 147 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~ 207 (302)
T TIGR01188 147 FLDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGT 207 (302)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 999999999999999999988765 5899999999999999999999999999997643
No 231
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=334.32 Aligned_cols=204 Identities=25% Similarity=0.395 Sum_probs=170.7
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-------------R 465 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-------------~ 465 (629)
+|+++||++.|+... .+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.. .
T Consensus 1 ~l~~~~l~~~~~~~~-~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 1 ILETRDLKYSYPDGT-EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred CEEEEEEEEEeCCCC-eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 478999999996333 48999999999999999999999999999999999999999999987631 3
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.....+ ...++.+++... .......+.+.++++.+|+.+.. ++++.+|||||+||++|||||+.+|+
T Consensus 80 i~~v~q~~~~~~-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LS~Gq~qrv~laral~~~p~ 157 (275)
T PRK13639 80 VGIVFQNPDDQL-FAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-NKPPHHLSGGQKKRVAIAGILAMKPE 157 (275)
T ss_pred eEEEeeChhhhh-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 688888753222 235777766421 11112235678899999997644 56789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+++++.
T Consensus 158 llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 225 (275)
T PRK13639 158 IIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKII-KEGTPKEVF 225 (275)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999999876 468999999999999999999999999997 468877764
No 232
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=334.76 Aligned_cols=206 Identities=24% Similarity=0.354 Sum_probs=171.5
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
.++|+++||++.|+.....+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 3 EEIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred CceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 3579999999999643334899999999999999999999999999999999999999999998873 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.... .....++.+++... .......+.+.++++.+||.... .+++.+|||||||||+|||||+.+|+
T Consensus 83 i~~~~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LS~G~~qrv~laral~~~p~ 160 (279)
T PRK13635 83 VGMVFQNPDN-QFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFL-NREPHRLSGGQKQRVAIAGVLALQPD 160 (279)
T ss_pred eEEEEeCHHH-hcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhh-hCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7899987532 23345787776432 12222345678899999997654 45779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||||||+|||+.++..+.+.|.++ +.|||+||||++++. .||+|++|++|+++ +.|+.+++.
T Consensus 161 lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13635 161 IIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAA-QADRVIVMNKGEIL-EEGTPEEIF 228 (279)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-cCCEEEEEECCEEE-EECCHHHHh
Confidence 99999999999999999999999765 468999999999997 59999999999997 467766543
No 233
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-40 Score=331.85 Aligned_cols=218 Identities=22% Similarity=0.304 Sum_probs=163.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~------ 74 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDED--ISLLPLHA------ 74 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--CCCCCHHH------
Confidence 5899999999998899999999999999999999999999999999999999999998875432 11100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh-ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD-DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+....+....+...+..+++ .....+. .........++.++++.+|+. +..++++.+|||||+|||+|||
T Consensus 75 --~~~~~i~~~~q~~~~~~~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~lar 150 (241)
T PRK10895 75 --RARRGIGYLPQEASIFRRLSVYDNL-MAVLQIRDDLSAEQREDRANELMEEFHIE-HLRDSMGQSLSGGERRRVEIAR 150 (241)
T ss_pred --HHHhCeEEeccCCcccccCcHHHHH-hhhhhcccccCHHHHHHHHHHHHHHcCCH-HHhhcchhhCCHHHHHHHHHHH
Confidence 0000011111111111111222222 2211111 122233456788999999996 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh---cCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKT---YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~---~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
||+.+|++|||||||++||+.++.++.+.|.+ .+.|||++|||++++..+||++++|++|+++.. ++.+.+
T Consensus 151 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~-~~~~~~ 224 (241)
T PRK10895 151 ALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH-GTPTEI 224 (241)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEee-CCHHHH
Confidence 99999999999999999999999988887754 468999999999999999999999999999875 444443
No 234
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=338.56 Aligned_cols=219 Identities=21% Similarity=0.276 Sum_probs=163.7
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|+++|++++|+ ++.+|+|+||+|.+||++||+||||||||||+++|+|+.+|++|++.+.+............
T Consensus 5 ~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~----- 79 (283)
T PRK13636 5 ILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK----- 79 (283)
T ss_pred eEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH-----
Confidence 599999999996 57899999999999999999999999999999999999999999998765332111000000
Q ss_pred hchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
.+..+..+.+... ...+.+..+++ ................++..+++.+|+. ...++++.+||||||||++||
T Consensus 80 ----~~~~ig~v~q~~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrl~la 153 (283)
T PRK13636 80 ----LRESVGMVFQDPDNQLFSASVYQDV-SFGAVNLKLPEDEVRKRVDNALKRTGIE-HLKDKPTHCLSFGQKKRVAIA 153 (283)
T ss_pred ----HHhhEEEEecCcchhhccccHHHHH-HhHHHHcCCCHHHHHHHHHHHHHHCCCh-hhhhCCcccCCHHHHHHHHHH
Confidence 0000111111100 00111222222 1111111223344456788999999996 578999999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+|||+++|++|++++++ +.+.+
T Consensus 154 raL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g-~~~~~ 229 (283)
T PRK13636 154 GVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQG-NPKEV 229 (283)
T ss_pred HHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC-CHHHH
Confidence 9999999999999999999999999998888654 689999999999999999999999999998765 44443
No 235
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=8.3e-40 Score=329.80 Aligned_cols=211 Identities=27% Similarity=0.378 Sum_probs=159.3
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--i~~~~~~~------ 72 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHD--LRRAPRAA------ 72 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEE--cccCChhh------
Confidence 3789999999998899999999999999999999999999999999999999999998875432 11100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
+..+....+.....+. .+..++..................+.++++.+|+. ...++++.+|||||+||++||||
T Consensus 73 ----~~~i~~~~q~~~~~~~-~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 73 ----LARLGVVFQQPTLDLD-LSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-ERADDKVRELNGGHRRRVEIARA 146 (236)
T ss_pred ----hhhEEEeCCCCCCccc-CcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhcCChhhCCHHHHHHHHHHHH
Confidence 0000001111011111 12222222221111222233456788899999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++.. ||++++|++|+++..+.
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~ 215 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGA 215 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCC
Confidence 99999999999999999999999999988754 5799999999999975 99999999999987643
No 236
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.9e-40 Score=329.04 Aligned_cols=215 Identities=23% Similarity=0.332 Sum_probs=155.6
Q ss_pred EEEEeEEEEeCCe----eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHGC----ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~~----~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++|++++|++. ++|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +........
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~~-- 77 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKD--LLKLSRRLR-- 77 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--ccccchhhH--
Confidence 7899999999865 79999999999999999999999999999999999999999999875432 111000000
Q ss_pred hhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccCh-hhHHHH-HHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISA-DTAEAR-AANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~-~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
...+..+..+.++.. .+.+..+..++............ ...... +.++++.+++.....++++.+||||||||
T Consensus 78 ----~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qr 153 (228)
T cd03257 78 ----KIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQR 153 (228)
T ss_pred ----HHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHH
Confidence 000000101111110 01111122222211111111111 111222 35789999995456788999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++..
T Consensus 154 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~ 227 (228)
T cd03257 154 VAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEec
Confidence 99999999999999999999999999999999988754 67999999999999999999999999998753
No 237
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-40 Score=344.03 Aligned_cols=221 Identities=20% Similarity=0.277 Sum_probs=163.9
Q ss_pred eEEEEeEEEEeCC----------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCC
Q psy10512 87 DVKIANFSITFHG----------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPAS 156 (629)
Q Consensus 87 ~i~i~nls~~y~~----------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~ 156 (629)
.|+++||++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|++.|++|++.+.+. ++...
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~--~l~~~ 82 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQ--DLLKA 82 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCE--EcCcC
Confidence 5999999999962 47999999999999999999999999999999999999999999887543 22111
Q ss_pred CcchhhhhhhchHHHHHHHHHHHHHh-ccCChhHH-HHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCC
Q psy10512 157 DKSALTCVMEVDEERVRLEKLAEQLV-ACEDDESQ-EQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFS 234 (629)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 234 (629)
....+. ..+..+..++++.. .+.+..+. +.+.............+...++.++|+.+||.....++++.+||
T Consensus 83 ~~~~~~------~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LS 156 (327)
T PRK11308 83 DPEAQK------LLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFS 156 (327)
T ss_pred CHHHHH------HHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCC
Confidence 000000 00000111111100 01111111 11111111101233344567889999999997556799999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 235 GGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||+|||+|||||+.+|+||||||||++||+.++.++++.|.++ +.|||+||||++++..+||+|++|++|+++++
T Consensus 157 gGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~ 236 (327)
T PRK11308 157 GGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEK 236 (327)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999988653 68999999999999999999999999999988
Q ss_pred cCcHH
Q psy10512 311 GGNYE 315 (629)
Q Consensus 311 ~g~~~ 315 (629)
+...+
T Consensus 237 g~~~~ 241 (327)
T PRK11308 237 GTKEQ 241 (327)
T ss_pred CCHHH
Confidence 65443
No 238
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=336.56 Aligned_cols=206 Identities=20% Similarity=0.276 Sum_probs=167.1
Q ss_pred CeEEEEEEEEEEcCCC---CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------
Q psy10512 398 PVIMVQNVSFRYSDDG---PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~---~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------- 463 (629)
..|+++|++++|+... ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 3589999999996432 23899999999999999999999999999999999999999999988652
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAY 533 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 533 (629)
..++|++|.....+ ...++.+++... .......+.+.++++.+++......+++.+|||||||||+|||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQL-FQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred HHHHhccEEEEEeCcchhh-hhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 13678888752112 224666655321 1111123456788999999533345678999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 534 LAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 534 al~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 238 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVIS-IGSPFEI 238 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 999999999999999999999999999988765 4689999999999999999999999999974 6776665
No 239
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=327.49 Aligned_cols=202 Identities=23% Similarity=0.320 Sum_probs=170.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce--------------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-------------- 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-------------- 464 (629)
+|+++|+++.|+. . .+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 2 ~l~~~~l~~~~~~-~-~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA-H-QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC-e-eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 5889999999963 3 48999999999999999999999999999999999999999999987631
Q ss_pred ---eEEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 465 ---RFARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 465 ---~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
.++|++|... +....++.+++... .........+.++++.+|+.... ++++.+|||||||||+|||||
T Consensus 80 ~~~~i~~~~q~~~--~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~laral 156 (242)
T PRK11124 80 LRRNVGMVFQQYN--LWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYA-DRFPLHLSGGQQQRVAIARAL 156 (242)
T ss_pred HHhheEEEecCcc--ccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHH
Confidence 3678888653 34456777776421 11112245678899999997543 557799999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||.+++..+||++++|++|+++ +.|+++++.
T Consensus 157 ~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 229 (242)
T PRK11124 157 MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV-EQGDASCFT 229 (242)
T ss_pred hcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHhc
Confidence 9999999999999999999999999999865 568999999999999999999999999997 578877653
No 240
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.1e-39 Score=323.80 Aligned_cols=191 Identities=24% Similarity=0.427 Sum_probs=161.3
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------eeE
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------------LRF 466 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------------~~~ 466 (629)
|+++||++.|+. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 34899999999999999999999999999999999999999999998763 136
Q ss_pred EeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+|++|... +....++.+++... .......+.+.++++.+|+... .++++.+|||||+|||+|||||+.+|+
T Consensus 79 ~~~~q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrv~la~al~~~p~ 155 (213)
T cd03262 79 GMVFQQFN--LFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADK-ADAYPAQLSGGQQQRVAIARALAMNPK 155 (213)
T ss_pred eEEecccc--cCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-hhhCccccCHHHHHHHHHHHHHhcCCC
Confidence 78888753 33456777765321 1111234567889999999754 356789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
+|||||||+|||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|++
T Consensus 156 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 156 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999876 46899999999999999999999999974
No 241
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.4e-40 Score=330.65 Aligned_cols=218 Identities=18% Similarity=0.301 Sum_probs=163.9
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+++.|+++++|+|+||+|.+|++++|+|||||||||||++|+|+++|++|++.+.+.. +........
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~~----- 74 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTD--LTGLPEHQI----- 74 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCee--cCCCCHHHH-----
Confidence 4899999999998889999999999999999999999999999999999999999999876432 111000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh--------ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD--------DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWR 238 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqr 238 (629)
.+..+....+....+ +..+..++........ .........++.++++.+|+. ...++++.+|||||+
T Consensus 75 ---~~~~i~~~~q~~~~~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~ 149 (242)
T TIGR03411 75 ---ARAGIGRKFQKPTVF-ENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-DEADRLAGLLSHGQK 149 (242)
T ss_pred ---HhcCeeEeccccccC-CCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHH
Confidence 000011111111111 1112222222211100 011123456788999999997 567889999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|||+|||||+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++..+ +.++
T Consensus 150 qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~-~~~~ 228 (242)
T TIGR03411 150 QWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEG-SLDQ 228 (242)
T ss_pred HHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeC-CHHH
Confidence 9999999999999999999999999999999999999876 479999999999999999999999999998764 4444
Q ss_pred H
Q psy10512 317 F 317 (629)
Q Consensus 317 ~ 317 (629)
+
T Consensus 229 ~ 229 (242)
T TIGR03411 229 V 229 (242)
T ss_pred H
Confidence 3
No 242
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.7e-40 Score=326.26 Aligned_cols=212 Identities=21% Similarity=0.283 Sum_probs=158.2
Q ss_pred EEEEeEEEEe-CCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 88 VKIANFSITF-HGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 88 i~i~nls~~y-~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
|+++|+++.| +++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 2 l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--i~~~~~~~~----- 74 (222)
T PRK10908 2 IRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHD--ITRLKNREV----- 74 (222)
T ss_pred EEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--cccCChhHH-----
Confidence 7899999999 67789999999999999999999999999999999999999999998875421 110000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+..+....+....++..+..++ .................++.++++.+|+. +..++++.+|||||||||+||||
T Consensus 75 -~~~~~~i~~~~q~~~~~~~~tv~~~-l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~lara 151 (222)
T PRK10908 75 -PFLRRQIGMIFQDHHLLMDRTVYDN-VAIPLIIAGASGDDIRRRVSAALDKVGLL-DKAKNFPIQLSGGEQQRVGIARA 151 (222)
T ss_pred -HHHHhheEEEecCccccccccHHHH-HHhHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCCchhCCHHHHHHHHHHHH
Confidence 0000011111111111111122222 22111111223333445678899999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEE
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKY 309 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~ 309 (629)
|+.+|++|||||||++||+.++..+.+.|.++ +.|+|+||||++++..+||+|++|++|+++.
T Consensus 152 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 152 VVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999888765 5799999999999999999999999999864
No 243
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.1e-40 Score=325.77 Aligned_cols=210 Identities=23% Similarity=0.363 Sum_probs=156.1
Q ss_pred EEEEeEEEEeCC-eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 88 VKIANFSITFHG-CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 88 i~i~nls~~y~~-~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--i~~~~~~~~----- 73 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQD--VSDLRGRAI----- 73 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--cccCCHHHH-----
Confidence 468999999964 689999999999999999999999999999999999999999998775421 111000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+..+..+.+....++..+..+++ ................++.++++.+|+. ...++++.+||||||||++||||
T Consensus 74 -~~~~~~i~~v~q~~~~~~~~t~~~~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~lara 150 (214)
T cd03292 74 -PYLRRKIGVVFQDFRLLPDRNVYENV-AFALEVTGVPPREIRKRVPAALELVGLS-HKHRALPAELSGGEQQRVAIARA 150 (214)
T ss_pred -HHHHHheEEEecCchhccCCcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHH
Confidence 00001111111111111111222222 2221111222334456788999999996 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeE
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKL 307 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i 307 (629)
|+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|++
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 151 IVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999988765 58999999999999999999999999874
No 244
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=331.43 Aligned_cols=217 Identities=23% Similarity=0.315 Sum_probs=162.4
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|+|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +......
T Consensus 1 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~------ 72 (255)
T PRK11231 1 MTLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKP--ISMLSSR------ 72 (255)
T ss_pred CEEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEE--hHHCCHH------
Confidence 35899999999999899999999999999999999999999999999999999999998775421 1000000
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHh----hhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYD----RLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
..+..+..+.++...+ +..+..++..... .+..........++.++++.+|+. ...++++.+|||||+|||
T Consensus 73 ---~~~~~i~~~~q~~~~~-~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv 147 (255)
T PRK11231 73 ---QLARRLALLPQHHLTP-EGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRIN-HLADRRLTDLSGGQRQRA 147 (255)
T ss_pred ---HHhhheEEecccCCCC-CCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCH-HHHcCCcccCCHHHHHHH
Confidence 0000111111111111 1112222222110 000111123345678899999996 567899999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++..+ +.+.
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~-~~~~ 224 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQG-TPEE 224 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEc-CHHH
Confidence 9999999999999999999999999999999988754 679999999999999999999999999998654 4443
No 245
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=330.53 Aligned_cols=203 Identities=27% Similarity=0.384 Sum_probs=170.3
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
+|+++|+++.|++ ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 6899999999963 34899999999999999999999999999999999999999999998773 2367
Q ss_pred eeccchhcccCCCCCHHHHHhhcCC-----ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc------
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFP-----EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW------ 536 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~------ 536 (629)
|++|... +....++.+++..... .......+.++++.+|+.... ++.+.+|||||||||+|||||+
T Consensus 80 ~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGe~qrv~la~al~~~~~~~ 156 (258)
T PRK13548 80 VLPQHSS--LSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-GRDYPQLSGGEQQRVQLARVLAQLWEPD 156 (258)
T ss_pred EEccCCc--CCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-cCCcccCCHHHHHHHHHHHHHhcccccC
Confidence 8888743 3345688877643211 112345678899999997543 4578999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++..
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 230 (258)
T PRK13548 157 GPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLV-ADGTPAEVLT 230 (258)
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEE-eeCCHHHHhC
Confidence 599999999999999999999999998765 468999999999999999999999999997 4688776643
No 246
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=322.81 Aligned_cols=225 Identities=24% Similarity=0.325 Sum_probs=183.6
Q ss_pred eEEEEeEEEEeCCe------------------------eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCC
Q psy10512 87 DVKIANFSITFHGC------------------------ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPD 142 (629)
Q Consensus 87 ~i~i~nls~~y~~~------------------------~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g 142 (629)
.|+++|+++-||.+ .-++|+||+|+.||++.|+|-||||||||+|+|++++.|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 48899999999752 257999999999999999999999999999999999999999
Q ss_pred ceEEEeecccCCCCCcchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCC
Q psy10512 143 HIDIFHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFT 222 (629)
Q Consensus 143 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~ 222 (629)
++.+.+. ++...+...+. ...+..+.+++|++..++..+..++ ..+...+..++..+.++++.++|+.+||.
T Consensus 84 ~ilv~g~--di~~~~~~~Lr-----~~Rr~~~sMVFQ~FaLlPhrtVl~N-v~fGLev~Gv~~~er~~~a~~~l~~VgL~ 155 (386)
T COG4175 84 EILVDGK--DIAKLSAAELR-----ELRRKKISMVFQSFALLPHRTVLEN-VAFGLEVQGVPKAEREERALEALELVGLE 155 (386)
T ss_pred eEEECCc--chhcCCHHHHH-----HHHhhhhhhhhhhhccccchhHhhh-hhcceeecCCCHHHHHHHHHHHHHHcCch
Confidence 9987543 33222222111 1233456677788777766554443 33334556778888899999999999997
Q ss_pred chhhhcccCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----hhcCCEEEEEecCHHHHHhhcce
Q psy10512 223 KEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEEL----KTYKRILVIISHSQDFLNGVCTN 298 (629)
Q Consensus 223 ~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L----~~~~~tvIivsHd~~~l~~~~d~ 298 (629)
.+.++++.+||||+||||-|||||+.+|+|||||||+|+|||--+..+.+.| +++++||||||||++++.++.||
T Consensus 156 -~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 156 -GYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred -hhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 6789999999999999999999999999999999999999998877766655 45589999999999999999999
Q ss_pred eEEEcCCeEEEEcCcHHHHHHH
Q psy10512 299 IIHLDKRKLKYYGGNYEAFCKT 320 (629)
Q Consensus 299 ii~l~~G~i~~~~g~~~~~~~~ 320 (629)
|.+|++|+|+..|.|.+....+
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCc
Confidence 9999999999988887665443
No 247
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.9e-39 Score=328.57 Aligned_cols=203 Identities=21% Similarity=0.323 Sum_probs=165.3
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCC--CCCccEEEECCc------------ee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDL--TPSVGMVRKNSH------------LR 465 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~--~p~~G~i~~~~~------------~~ 465 (629)
|+++||++.|++ ..+|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.+++. ..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 478999999963 34899999999999999999999999999999999995 799999998763 12
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc---C---------CChhhHHHHHHHHHHcCCCCcccccCcC-cCChhHHHHHHHH
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS---F---------PEVKDREEMRKIIGRYGLTGRQQVCPIR-QLSDGQKCRVVFA 532 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~l~~~gl~~~~~~~~~~-~LSgGqkqrv~lA 532 (629)
++|++|... +....++.+++... . ......+.+.++++.+|+......+++. +|||||||||+||
T Consensus 79 i~~v~q~~~--~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la 156 (243)
T TIGR01978 79 LFLAFQYPE--EIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEIL 156 (243)
T ss_pred eEeeecccc--ccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHH
Confidence 677777753 23445666654221 0 0011235678899999997433345665 5999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhh-cCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQV-AEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+ ||++++|++|+++ +.|+++++++
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 234 (243)
T TIGR01978 157 QMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIV-KSGDVELAKE 234 (243)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEE-EecCHHHhcc
Confidence 9999999999999999999999999999999876 46899999999999998 8999999999997 5788776553
No 248
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=334.69 Aligned_cols=201 Identities=20% Similarity=0.270 Sum_probs=168.3
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------ee
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------------LR 465 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------------~~ 465 (629)
.++|+++.|+. ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 57799999953 34899999999999999999999999999999999999999999998762 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|... +....++.+++... .......+.+.++++.+||.... ++++.+|||||||||+|||||+.+|+
T Consensus 104 i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrv~lAral~~~p~ 180 (269)
T cd03294 104 ISMVFQSFA--LLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWE-HKYPDELSGGMQQRVGLARALAVDPD 180 (269)
T ss_pred EEEEecCcc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-hCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 788888753 33456777766431 11112345678899999997544 55779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|||||||+|||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+.+++.+
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 250 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLV-QVGTPEEILT 250 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHHh
Confidence 99999999999999999999998765 468999999999999999999999999997 4677776643
No 249
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=336.29 Aligned_cols=214 Identities=18% Similarity=0.289 Sum_probs=161.6
Q ss_pred eEEEEeEEEEeCC---eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 87 DVKIANFSITFHG---CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~---~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
+|+++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +......
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--i~~~~~~---- 77 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDL--LTEENVW---- 77 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEE--CCcCcHH----
Confidence 5999999999974 459999999999999999999999999999999999999999998875432 1110000
Q ss_pred hhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
..+..+..+.++.. .+...+..+++ ............+...++.++++.+|+. +..++++.+|||||+|||+
T Consensus 78 -----~~~~~i~~v~q~~~~~~~~~tv~eni-~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGq~qrv~ 150 (279)
T PRK13650 78 -----DIRHKIGMVFQNPDNQFVGATVEDDV-AFGLENKGIPHEEMKERVNEALELVGMQ-DFKEREPARLSGGQKQRVA 150 (279)
T ss_pred -----HHHhhceEEEcChHHhcccccHHHHH-HhhHHhCCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHH
Confidence 00111111111110 11111222222 2111111233444566789999999996 5779999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
|||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++. +||+|++|++|+++..+.+.
T Consensus 151 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~ 225 (279)
T PRK13650 151 IAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPR 225 (279)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999988654 689999999999995 89999999999998775543
No 250
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.5e-39 Score=330.15 Aligned_cols=215 Identities=24% Similarity=0.291 Sum_probs=161.1
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCcchhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
|+++||+++|++..+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|++.+.+.. +.......
T Consensus 2 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~--~~~~~~~~-- 77 (247)
T TIGR00972 2 IEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQD--IYDKKIDV-- 77 (247)
T ss_pred EEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEE--ccccccch--
Confidence 78999999999888999999999999999999999999999999999999988 8888775432 11100000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc-cChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD-ISADTAEARAANILHGLGFTK---EMQQKKTKDFSGGWR 238 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGqr 238 (629)
...+..+..+.+....+ +.+..+++ ........ ........++.++++.+|+.. +..++++.+||||||
T Consensus 78 -----~~~~~~i~~v~q~~~~~-~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 -----VELRRRVGMVFQKPNPF-PMSIYDNI-AYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQ 150 (247)
T ss_pred -----HHHHhheEEEecCcccC-CCCHHHHH-HhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHH
Confidence 00000111111111111 12222222 21111111 122344567888999999962 456888999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++..+.+
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPT 227 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999998765 37999999999999999999999999999876543
No 251
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.7e-39 Score=327.33 Aligned_cols=202 Identities=23% Similarity=0.279 Sum_probs=168.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC-----ccEEEECCc----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS-----VGMVRKNSH---------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~-----~G~i~~~~~---------- 463 (629)
+|+++||++.|+. . .+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.+++.
T Consensus 1 ~l~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 1 AIEIENLNLFYGE-K-EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred CEEEEEEEEEECC-e-eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 4789999999963 3 4899999999999999999999999999999999999998 999998763
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhc--C----CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQS--F----PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|... +.. .++.+++... . ......+.+..+++.+|+.. ....+++.+|||||||||+|
T Consensus 79 ~~~~~i~~v~q~~~--~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 79 ELRRRVGMVFQKPN--PFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCI 155 (247)
T ss_pred HHHhheEEEecCcc--cCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHH
Confidence 23778888753 233 6777766421 1 11123456788999999962 22345789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|.++. .|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 231 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELV-EYGPTEQIF 231 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 999999999999999999999999999999998763 68999999999999999999999999997 467776653
No 252
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=329.56 Aligned_cols=205 Identities=21% Similarity=0.270 Sum_probs=168.9
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc-------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH------- 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~------- 463 (629)
.+|+|+++||++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|++. |++|+|.+++.
T Consensus 3 ~~~~l~~~~l~~~~~~-~-~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 80 (253)
T PRK14242 3 SPPKMEARGLSFFYGD-F-QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHV 80 (253)
T ss_pred CCcEEEEeeeEEEECC-e-eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccccc
Confidence 3678999999999963 3 48999999999999999999999999999999999974 68999988762
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhhcC--C---C-hhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHH
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQSF--P---E-VKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCR 528 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~---~-~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqr 528 (629)
..++|++|... +.. .++.+++.... . . ....+++..+++.+|+... ...+++.+||||||||
T Consensus 81 ~~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 157 (253)
T PRK14242 81 DVVELRRRVGMVFQKPN--PFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQR 157 (253)
T ss_pred CHHHHhhcEEEEecCCC--CCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHH
Confidence 24788888753 222 47777664221 1 1 1224567888999998531 2345778999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 529 VVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 529 v~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 158 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 236 (253)
T PRK14242 158 LCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLI-EVGPTEQIF 236 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 99999999999999999999999999999999999876 368999999999999999999999999997 467776653
No 253
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-39 Score=329.27 Aligned_cols=202 Identities=25% Similarity=0.339 Sum_probs=170.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------eEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-----------RFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-----------~~~ 467 (629)
+|+++|++++|++ ..+|+++||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++.. .++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 2 TLRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 6899999999963 348999999999999999999999999999999999999999999987731 378
Q ss_pred eeccchhcccCCCCCHHHHHhhcC-------C--ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccC
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF-------P--EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 538 (629)
|++|... +....++.+++.... . .....+.+..+++.+|+.... ++++.+|||||+|||+||||++.+
T Consensus 80 ~~~q~~~--~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~ 156 (255)
T PRK11231 80 LLPQHHL--TPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-DRRLTDLSGGQRQRAFLAMVLAQD 156 (255)
T ss_pred EecccCC--CCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-cCCcccCCHHHHHHHHHHHHHhcC
Confidence 8888753 334557777664321 1 112345678899999997543 567899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|++|||||||+|||+.+++.+.+.|.++ +.|||++|||++++.++||++++|++|+++ ..|+++++.
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 226 (255)
T PRK11231 157 TPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVM-AQGTPEEVM 226 (255)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEE-EEcCHHHhc
Confidence 9999999999999999999999999765 468999999999999999999999999997 567777664
No 254
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-40 Score=306.36 Aligned_cols=220 Identities=22% Similarity=0.303 Sum_probs=172.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+++++|++|++|.+++|||||||||||||.+++.+.++++|++.+.+.. +...+...+
T Consensus 1 MI~i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~--~~~~~s~~L----- 73 (252)
T COG4604 1 MITIENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLE--LTSTPSKEL----- 73 (252)
T ss_pred CeeehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeee--cccCChHHH-----
Confidence 4889999999999999999999999999999999999999999999999999999999887543 222211111
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhh--hhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDR--LDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
...+.-+.++ .......++.++..+... -......+.+..+.++++.|+|+ ++.+++..+||||||||..||
T Consensus 74 ----Ak~lSILkQ~-N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~-~l~dryLd~LSGGQrQRAfIA 147 (252)
T COG4604 74 ----AKKLSILKQE-NHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLE-DLSDRYLDELSGGQRQRAFIA 147 (252)
T ss_pred ----HHHHHHHHhh-chhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhccc-chHHHhHHhcccchhhhhhhh
Confidence 1111111111 111111233333332111 11223446677899999999997 689999999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHh----hcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELK----TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCK 319 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~----~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~ 319 (629)
..|+++.+.+|||||.|+||......++..|+ ++++|||+|-||.+|+..++|+|+.|++|+++..|.+.+.+..
T Consensus 148 MVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~~ 226 (252)
T COG4604 148 MVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQP 226 (252)
T ss_pred eeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcCH
Confidence 99999999999999999999999999888876 4589999999999999999999999999999988776655543
No 255
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.3e-39 Score=325.35 Aligned_cols=201 Identities=23% Similarity=0.324 Sum_probs=166.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEE
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFA 467 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~ 467 (629)
|+++||++.|+. . .+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ-S-HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC-e-EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 478999999963 3 4899999999999999999999999999999999999999999998762 2478
Q ss_pred eeccchhcccCCCCCHHHHHhhcC--CChhhHHHHHHHHHHcC-CCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF--PEVKDREEMRKIIGRYG-LTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g-l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
|++|... +....++.+++.... ......+.+.++++.++ +.. ..++++.+|||||+|||+|||||+.+|++|||
T Consensus 79 ~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p~illl 155 (230)
T TIGR03410 79 YVPQGRE--IFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKE-MLGRRGGDLSGGQQQQLAIARALVTRPKLLLL 155 (230)
T ss_pred EeccCCc--ccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHH-HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 8888753 334567777654321 11112334567788887 443 34567899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||++||+.++..+.+.|.++ +.|||+||||++++..+||+++++++|+++ ..|+.+++.
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~-~~~~~~~~~ 220 (230)
T TIGR03410 156 DEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVV-ASGAGDELD 220 (230)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHcC
Confidence 9999999999999999999775 468999999999999999999999999997 467776653
No 256
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.1e-39 Score=334.36 Aligned_cols=218 Identities=25% Similarity=0.367 Sum_probs=161.0
Q ss_pred eEEEEeEEEEeC---------CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCC
Q psy10512 87 DVKIANFSITFH---------GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASD 157 (629)
Q Consensus 87 ~i~i~nls~~y~---------~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~ 157 (629)
+|+++||++.|+ ++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +....
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--i~~~~ 79 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQD--LYQLD 79 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--ccccC
Confidence 489999999996 3679999999999999999999999999999999999999999999875432 11100
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHH-HHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCCh
Q psy10512 158 KSALTCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMD-IYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235 (629)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 235 (629)
..... ..+..+..+.++.. .+.+..+..++.. .......+.......++.++++.+|+.....++++.+|||
T Consensus 80 ~~~~~------~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSg 153 (265)
T TIGR02769 80 RKQRR------AFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSG 153 (265)
T ss_pred HHHHH------HHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCH
Confidence 00000 00000111111110 1111112222211 1111112223334567889999999964567889999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||+|||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++..+
T Consensus 154 Ge~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 233 (265)
T TIGR02769 154 GQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEEC 233 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEEC
Confidence 9999999999999999999999999999999999998888654 689999999999999999999999999998764
Q ss_pred C
Q psy10512 312 G 312 (629)
Q Consensus 312 g 312 (629)
.
T Consensus 234 ~ 234 (265)
T TIGR02769 234 D 234 (265)
T ss_pred C
Confidence 4
No 257
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.4e-40 Score=325.43 Aligned_cols=201 Identities=23% Similarity=0.371 Sum_probs=152.1
Q ss_pred EEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhch
Q psy10512 89 KIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVD 168 (629)
Q Consensus 89 ~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~ 168 (629)
+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~-------------- 64 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKP--LE-------------- 64 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCcc--HH--------------
Confidence 36899999998889999999999999999999999999999999999999999998875321 10
Q ss_pred HHHHHHHHHHHHHhccC-ChhHHHHHHHHHhhhh-c---cChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 169 EERVRLEKLAEQLVACE-DDESQEQLMDIYDRLD-D---ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~---~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
..+..+..+.++..... ...+..++........ . ........++.++++.+|+. +..++++.+|||||||||+|
T Consensus 65 ~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~l 143 (213)
T cd03235 65 KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLS-ELADRQIGELSGGQQQRVLL 143 (213)
T ss_pred HHHhheEEeccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHH
Confidence 00001111111111000 0012222221111000 0 11123446788999999996 56788999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCe
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRK 306 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~ 306 (629)
||||+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|.
T Consensus 144 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~ 209 (213)
T cd03235 144 ARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTV 209 (213)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcE
Confidence 99999999999999999999999999999988765 5799999999999999999999998863
No 258
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=326.93 Aligned_cols=206 Identities=23% Similarity=0.372 Sum_probs=173.1
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-C----CccEEEECCc--------
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-P----SVGMVRKNSH-------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-p----~~G~i~~~~~-------- 463 (629)
+|+++||+..|.... ..+++||||+|++||++||||.|||||||+.+.|+|+++ | .+|+|.++|.
T Consensus 1 lL~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~ 80 (316)
T COG0444 1 LLEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEK 80 (316)
T ss_pred CceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHH
Confidence 478999999996432 348999999999999999999999999999999999998 4 5789988763
Q ss_pred -------eeEEeeccchhcccCCCCCHHHHHhhc----C---CChhhHHHHHHHHHHcCCCCc--ccccCcCcCChhHHH
Q psy10512 464 -------LRFARYHQHLHELLDLDISPLDYMLQS----F---PEVKDREEMRKIIGRYGLTGR--QQVCPIRQLSDGQKC 527 (629)
Q Consensus 464 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqkq 527 (629)
..+++++|++...+++..++-..+... . ......+++.++|+.+||+.. ..+.++++|||||+|
T Consensus 81 ~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQ 160 (316)
T COG0444 81 ELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQ 160 (316)
T ss_pred HHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHH
Confidence 258899999877777777765443221 1 112345678899999999865 445678999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHH
Q psy10512 528 RVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNIL 603 (629)
Q Consensus 528 rv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 603 (629)
||+||.||+.+|+|||.||||++||...+.+++++|+++ +.++|+||||+..+.++||||+||..|+|++ .|+.+
T Consensus 161 RV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE-~g~~~ 239 (316)
T COG0444 161 RVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVE-EGPVE 239 (316)
T ss_pred HHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEE-eCCHH
Confidence 999999999999999999999999999999999998765 5689999999999999999999999999986 57665
Q ss_pred HH
Q psy10512 604 DY 605 (629)
Q Consensus 604 ~~ 605 (629)
++
T Consensus 240 ~i 241 (316)
T COG0444 240 EI 241 (316)
T ss_pred HH
Confidence 44
No 259
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.3e-40 Score=315.34 Aligned_cols=204 Identities=24% Similarity=0.443 Sum_probs=180.4
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------eeEEeecc
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------LRFARYHQ 471 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------~~~~~~~q 471 (629)
.|++++|+++|++ ..+++|+||+|++|++.|++|||||||||++|+|.|+++|++|+|.++|. .++||++.
T Consensus 2 ~L~ie~vtK~Fg~--k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPE 79 (300)
T COG4152 2 ALEIEGVTKSFGD--KKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPE 79 (300)
T ss_pred ceEEecchhccCc--eeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChh
Confidence 5899999999964 34899999999999999999999999999999999999999999999884 37899987
Q ss_pred chhcccCCCCCHHHHHh-----hcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 472 HLHELLDLDISPLDYML-----QSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
.. .+...+++.+.+. .+++.......+..||+++++.+.. .+++.+||-|++|++.|..+++++|++|||||
T Consensus 80 ER--GLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~-~~kIk~LSKGnqQKIQfisaviHePeLlILDE 156 (300)
T COG4152 80 ER--GLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKK-TKKIKELSKGNQQKIQFISAVIHEPELLILDE 156 (300)
T ss_pred hh--ccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccc-cchHHHhhhhhhHHHHHHHHHhcCCCEEEecC
Confidence 64 3566788877542 2455556677889999999998765 46899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 547 PTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
|+|||||-+.+.|.+.+.++ +.|||++||.++-++++||++++|++|+.+ ..|+..+.++.
T Consensus 157 PFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V-~~G~v~~ir~~ 220 (300)
T COG4152 157 PFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTV-LYGTVEDIRRS 220 (300)
T ss_pred CccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceE-EeccHHHHHHh
Confidence 99999999999999998765 679999999999999999999999999987 57998888764
No 260
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.2e-39 Score=327.51 Aligned_cols=204 Identities=19% Similarity=0.281 Sum_probs=168.3
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC----CccEEEECCc---------ee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP----SVGMVRKNSH---------LR 465 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p----~~G~i~~~~~---------~~ 465 (629)
+|+++||++.| +. .+|+++||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++. ..
T Consensus 4 ~l~~~~l~~~~--~~-~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 80 (254)
T PRK10418 4 QIELRNIALQA--AQ-PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRK 80 (254)
T ss_pred EEEEeCeEEEe--cc-ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccce
Confidence 68999999999 23 389999999999999999999999999999999999999 9999998763 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhh---cCCChhhHHHHHHHHHHcCCCCc--ccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQ---SFPEVKDREEMRKIIGRYGLTGR--QQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.....+....++.+++.. ........+.+.++++.+|+... ...+++.+|||||+|||+|||||+.+|+
T Consensus 81 i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 160 (254)
T PRK10418 81 IATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAP 160 (254)
T ss_pred EEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCC
Confidence 788888753223333455444321 11111234678899999999752 2345779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 161 lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~ 229 (254)
T PRK10418 161 FIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIV-EQGDVETLF 229 (254)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 99999999999999999999998765 468999999999999999999999999997 567777664
No 261
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=338.14 Aligned_cols=216 Identities=19% Similarity=0.268 Sum_probs=160.7
Q ss_pred eEEEEeEEEEeCCe-----eeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccC--CC-CCc
Q psy10512 87 DVKIANFSITFHGC-----ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREM--PA-SDK 158 (629)
Q Consensus 87 ~i~i~nls~~y~~~-----~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~--~~-~~~ 158 (629)
.|+++|++++|+++ .+|+|+||+|++|+++||+||||||||||+++|+|+++|++|++.+.+..... .. ...
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 59999999999864 49999999999999999999999999999999999999999998875432100 00 000
Q ss_pred ----chhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCC
Q psy10512 159 ----SALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFS 234 (629)
Q Consensus 159 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LS 234 (629)
..+.++.+... ...... +..++.................++.++++.+++.....++++.+||
T Consensus 86 ~~~~~~i~~v~q~~~------------~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS 152 (289)
T PRK13645 86 KRLRKEIGLVFQFPE------------YQLFQE-TIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELS 152 (289)
T ss_pred HHHhccEEEEEeCcc------------hhhhhh-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCC
Confidence 00001100000 000001 1111111111111122233445678899999995457789999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 235 GGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||||||+|||||+.+|+||||||||++||+.++..+++.|.++ +.|||+||||++++..+||++++|++|+++..
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999887654 67999999999999999999999999999877
Q ss_pred cCcHH
Q psy10512 311 GGNYE 315 (629)
Q Consensus 311 ~g~~~ 315 (629)
+.+.+
T Consensus 233 g~~~~ 237 (289)
T PRK13645 233 GSPFE 237 (289)
T ss_pred CCHHH
Confidence 65443
No 262
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=326.11 Aligned_cols=203 Identities=22% Similarity=0.278 Sum_probs=167.9
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
++|+++|+++.|+. ..+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 4 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 4 VMLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred cEEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 57999999999963 34899999999999999999999999999999999999999999998763 13
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC--CC-hhhHHHHHHHHHHc-CCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF--PE-VKDREEMRKIIGRY-GLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~l~~~-gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
++|++|... +....++.+++.... .. ....+.+.++++.+ ++.... ..++.+|||||+|||+|||||+.+|++
T Consensus 82 i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~i 158 (237)
T PRK11614 82 VAIVPEGRR--VFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERR-IQRAGTMSGGEQQMLAIGRALMSQPRL 158 (237)
T ss_pred EEEeccCcc--cCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHHH-hCchhhCCHHHHHHHHHHHHHHhCCCE
Confidence 778887643 334567777764321 11 11234566777777 465433 457789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ +.|++++..
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 225 (237)
T PRK11614 159 LLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVV-LEDTGDALL 225 (237)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEE-eeCCHHHHh
Confidence 9999999999999999999998765 568999999999999999999999999997 578876654
No 263
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.6e-40 Score=326.21 Aligned_cols=210 Identities=21% Similarity=0.287 Sum_probs=157.0
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++++|+|+||+|.+|+++||+|||||||||||++|+|+++|+.|++.+.+.. +........
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~~------ 72 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRD--ITGLPPHER------ 72 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--cCCCCHHHH------
Confidence 578999999998899999999999999999999999999999999999999999999875432 111000000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhC-CCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGL-GFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~l-gl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
.+..+..+.+....++..+..+++ ....... .......++.++++.+ ++. +..++++.+|||||||||+||||
T Consensus 73 --~~~~i~~~~q~~~~~~~~t~~~~l-~~~~~~~--~~~~~~~~~~~~l~~~~~l~-~~~~~~~~~LS~G~~qrv~lara 146 (222)
T cd03224 73 --ARAGIGYVPEGRRIFPELTVEENL-LLGAYAR--RRAKRKARLERVYELFPRLK-ERRKQLAGTLSGGEQQMLAIARA 146 (222)
T ss_pred --HhcCeEEeccccccCCCCcHHHHH-HHHhhhc--CchhHHHHHHHHHHHHHhhh-hhhhCchhhCCHHHHHHHHHHHH
Confidence 000011111111111111222222 2111111 1122344567778887 464 56788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
|+.+|++|||||||++||+.++..+++.|+++ +.|||++|||++++..+||++++|++|+++..+
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~ 214 (222)
T cd03224 147 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEG 214 (222)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeC
Confidence 99999999999999999999999999988765 579999999999999999999999999998654
No 264
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.8e-39 Score=368.23 Aligned_cols=205 Identities=29% Similarity=0.467 Sum_probs=170.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhccc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELL 477 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~ 477 (629)
++|+++||+++|++ . .+|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+++...+++++|....
T Consensus 2 ~~l~i~~ls~~~~~-~-~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~-- 77 (635)
T PRK11147 2 SLISIHGAWLSFSD-A-PLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPR-- 77 (635)
T ss_pred cEEEEeeEEEEeCC-c-eeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCC--
Confidence 37999999999964 3 4899999999999999999999999999999999999999999999876666776664311
Q ss_pred CCCCCHHHHHh------------------------------------h---cCCChhhHHHHHHHHHHcCCCCcccccCc
Q psy10512 478 DLDISPLDYML------------------------------------Q---SFPEVKDREEMRKIIGRYGLTGRQQVCPI 518 (629)
Q Consensus 478 ~~~~~~~~~~~------------------------------------~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~ 518 (629)
....++.+++. . .........++..+++.+||.. ++++
T Consensus 78 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~---~~~~ 154 (635)
T PRK11147 78 NVEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLDP---DAAL 154 (635)
T ss_pred CCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCCC---CCch
Confidence 11112211110 0 0001112456788999999962 4688
Q ss_pred CcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEe
Q psy10512 519 RQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKW 598 (629)
Q Consensus 519 ~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 598 (629)
.+|||||||||+|||||+.+|+||||||||||||+.++.+|.+.|.+++++||+||||++++..+||+|++|++|+++.+
T Consensus 155 ~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~ 234 (635)
T PRK11147 155 SSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVSY 234 (635)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999888
Q ss_pred cCCHHHHHHHH
Q psy10512 599 EGNILDYKETL 609 (629)
Q Consensus 599 ~g~~~~~~~~~ 609 (629)
.|+|..|.+..
T Consensus 235 ~g~~~~~~~~~ 245 (635)
T PRK11147 235 PGNYDQYLLEK 245 (635)
T ss_pred cCCHHHHHHHH
Confidence 99999886643
No 265
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=332.05 Aligned_cols=203 Identities=24% Similarity=0.329 Sum_probs=167.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRF 466 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~ 466 (629)
+|+++||++.|+.+. .+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 1 ml~~~~l~~~~~~~~-~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 1 MIRLENVSYSYPDGT-PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred CEEEEEEEEEcCCCC-ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 478999999995333 4899999999999999999999999999999999999999999988763 136
Q ss_pred EeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|++|.+... ....++.+++... .......+.+.++++.+|+.... +.++..|||||+|||+|||||+.+|+|
T Consensus 80 ~~v~q~~~~~-~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~laral~~~p~l 157 (274)
T PRK13644 80 GIVFQNPETQ-FVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-HRSPKTLSGGQGQCVALAGILTMEPEC 157 (274)
T ss_pred EEEEEChhhh-cccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-cCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 7888875322 2335777765321 11112345678889999997644 467899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||||+|||+.++..+.+.|.++ +.|||++|||++++. .||+|++|++|+++ ..|+.+++.
T Consensus 158 llLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~-~~g~~~~~~ 223 (274)
T PRK13644 158 LIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIV-LEGEPENVL 223 (274)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEE-EECCHHHHh
Confidence 9999999999999999999999765 468999999999995 69999999999997 467776653
No 266
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3.9e-39 Score=328.13 Aligned_cols=201 Identities=22% Similarity=0.360 Sum_probs=168.0
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------------
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------------- 463 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------------- 463 (629)
|+++||++.|+. . .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 1 i~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI-L-TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC-e-eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 478999999963 3 4899999999999999999999999999999999999999999988763
Q ss_pred --------eeEEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHH
Q psy10512 464 --------LRFARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 --------~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +....++.+++... .......+.+.++++.+|+.... ++++.+|||||+|||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv 155 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFN--LFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKA-DHMPAQLSGGQQQRV 155 (252)
T ss_pred hhHHHHHhhCeEEEecCcc--cCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHh-hcChhhcCHHHHHHH
Confidence 13677777643 34456777766431 11112345678899999997543 456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+.+++
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 234 (252)
T TIGR03005 156 AIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEI 234 (252)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999999999999998764 568999999999999999999999999997 56777666
Q ss_pred H
Q psy10512 606 K 606 (629)
Q Consensus 606 ~ 606 (629)
.
T Consensus 235 ~ 235 (252)
T TIGR03005 235 F 235 (252)
T ss_pred h
Confidence 4
No 267
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=323.67 Aligned_cols=201 Identities=26% Similarity=0.424 Sum_probs=169.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEee
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARY 469 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~ 469 (629)
+|+++||+++|+. . ..++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 ~l~~~~l~~~~~~--~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 76 (232)
T PRK10771 1 MLKLTDITWLYHH--L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSML 76 (232)
T ss_pred CeEEEEEEEEECC--c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEE
Confidence 4789999999953 2 34999999999999999999999999999999999999999998763 247888
Q ss_pred ccchhcccCCCCCHHHHHhhcC-C----ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEE
Q psy10512 470 HQHLHELLDLDISPLDYMLQSF-P----EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLL 544 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 544 (629)
+|... +....++.+++.... + .....+++.++++.+|+... .++++.+|||||+|||+||||++.+|++|||
T Consensus 77 ~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrv~laral~~~p~lllL 153 (232)
T PRK10771 77 FQENN--LFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDL-LARLPGQLSGGQRQRVALARCLVREQPILLL 153 (232)
T ss_pred ecccc--cccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHH-HhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88753 344567777764321 1 11234568889999999754 4567899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 545 DEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 545 DEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+++++..
T Consensus 154 DEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~~~ 219 (232)
T PRK10771 154 DEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIA-WDGPTDELLS 219 (232)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999988765 468999999999999999999999999997 5788777654
No 268
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.2e-39 Score=330.52 Aligned_cols=207 Identities=22% Similarity=0.318 Sum_probs=169.5
Q ss_pred CeEEEEEEEEEEcCC-------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------
Q psy10512 398 PVIMVQNVSFRYSDD-------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~-------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------- 463 (629)
++|+++||++.|+.+ ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.
T Consensus 2 ~~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~ 81 (268)
T PRK10419 2 TLLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNR 81 (268)
T ss_pred ceEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccCh
Confidence 378999999999631 235899999999999999999999999999999999999999999998763
Q ss_pred -------eeEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHH
Q psy10512 464 -------LRFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 -------~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|.....+....++.+++.. ..........+.++++.+|+......+++.+|||||+|||+
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~ 161 (268)
T PRK10419 82 AQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVC 161 (268)
T ss_pred hHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHH
Confidence 14788888753234445566665421 11111233467899999999643445678999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+..+.
T Consensus 162 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~ 239 (268)
T PRK10419 162 LARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIV-ETQPVGDK 239 (268)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEe-eeCChhhc
Confidence 999999999999999999999999999999988765 568999999999999999999999999997 45665553
No 269
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=7.6e-40 Score=352.88 Aligned_cols=223 Identities=24% Similarity=0.338 Sum_probs=168.2
Q ss_pred eeEEEEeEEEEeCC-----------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCC
Q psy10512 86 RDVKIANFSITFHG-----------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMP 154 (629)
Q Consensus 86 ~~i~i~nls~~y~~-----------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~ 154 (629)
..++++||++.|.. ..+++||||+|.+||++||||+||||||||.|+|+|+..|+.|.+.+.+....+.
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 46899999999973 3589999999999999999999999999999999999999999988765431111
Q ss_pred CCCcchhhhhhhchHHHHHHHHHHHHH-hccCChhHHHHH-HHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCC
Q psy10512 155 ASDKSALTCVMEVDEERVRLEKLAEQL-VACEDDESQEQL-MDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKD 232 (629)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 232 (629)
.... ...+..+...++.- ....+..+.... .............+..+++.++|+.+|++.+..++++++
T Consensus 359 ~~~~---------~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~e 429 (539)
T COG1123 359 GGEL---------RRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHE 429 (539)
T ss_pred cchh---------hhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchh
Confidence 1000 00111111111110 111111222222 111111111223455668999999999998889999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
|||||||||+|||||+.+|++|++|||||+||+..+..+.+.|++ ++.|.||||||++++..+||||++|++|+|+
T Consensus 430 lSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iV 509 (539)
T COG1123 430 LSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIV 509 (539)
T ss_pred cCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEE
Confidence 999999999999999999999999999999999999998888764 4789999999999999999999999999999
Q ss_pred EEcCcHHHH
Q psy10512 309 YYGGNYEAF 317 (629)
Q Consensus 309 ~~~g~~~~~ 317 (629)
+.|.....|
T Consensus 510 E~G~~~~v~ 518 (539)
T COG1123 510 EEGPTEKVF 518 (539)
T ss_pred EeCCHHHHh
Confidence 998554444
No 270
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-39 Score=331.01 Aligned_cols=224 Identities=20% Similarity=0.304 Sum_probs=162.1
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCC---cc--hhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASD---KS--ALT 162 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~---~~--~~~ 162 (629)
|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|++.|++|++.+.+.. +.... .. ...
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQ--LYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--ccccccccccccccc
Confidence 578999999998899999999999999999999999999999999999999999998775432 11000 00 000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
. ......+..+..+.+....++..+..+++..................+.++++.+|+. +..++.+.+|||||+|||+
T Consensus 79 ~-~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~ 156 (252)
T TIGR03005 79 E-KHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLA-DKADHMPAQLSGGQQQRVA 156 (252)
T ss_pred h-hHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hHhhcChhhcCHHHHHHHH
Confidence 0 0000000011111111111111222222221111111122334456788999999996 5678899999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|||||+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|++++.+ +.+.
T Consensus 157 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g-~~~~ 233 (252)
T TIGR03005 157 IARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQG-KPDE 233 (252)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC-CHHH
Confidence 999999999999999999999999999999988653 679999999999999999999999999998764 4443
No 271
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.4e-39 Score=329.48 Aligned_cols=217 Identities=23% Similarity=0.260 Sum_probs=158.7
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCC--CCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNRE--VPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~--~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+. .|++|+|.+.+.. +........
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~--~~~~~~~~~---- 74 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQD--LLELEPDER---- 74 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEe--cCCCCHHHh----
Confidence 57899999999889999999999999999999999999999999999995 6889998875432 111000000
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh------ccChhhHHHHHHHHHHhCCCCchhhhcccC-CCChHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD------DISADTAEARAANILHGLGFTKEMQQKKTK-DFSGGWR 238 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~-~LSGGqr 238 (629)
.+..+..+.+....++..+..+++........ .........++.++++.+|+.....++++. +||||||
T Consensus 75 ----~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 75 ----ARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ----hccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHH
Confidence 00000011111111111111222211111110 012223346788999999997455677776 5999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhh-cceeEEEcCCeEEEEcCcH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGV-CTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~-~d~ii~l~~G~i~~~~g~~ 314 (629)
|||+|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+ ||++++|++|+++..+ +.
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g-~~ 229 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG-DV 229 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec-CH
Confidence 9999999999999999999999999999999999998776 57999999999999998 8999999999998654 44
Q ss_pred H
Q psy10512 315 E 315 (629)
Q Consensus 315 ~ 315 (629)
+
T Consensus 230 ~ 230 (243)
T TIGR01978 230 E 230 (243)
T ss_pred H
Confidence 4
No 272
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=310.63 Aligned_cols=204 Identities=22% Similarity=0.358 Sum_probs=173.8
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECC------------cee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNS------------HLR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~------------~~~ 465 (629)
++|.++|+.++|+. ..++++|||+|++||++||.|||||||||.+.+++|+.+|++|.|.+++ +..
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 46899999999953 3489999999999999999999999999999999999999999999876 246
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC---C--Ch--hhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF---P--EV--KDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~---~--~~--~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 538 (629)
++|++|... .+-.+|+.+++.... . .. ..+.++.++|+.|++.+.. +++..+||||||+||.|||||+.+
T Consensus 81 igYLpQE~S--IFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr-~~~a~sLSGGERRR~EIARaLa~~ 157 (243)
T COG1137 81 IGYLPQEAS--IFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLR-DSKAYSLSGGERRRVEIARALAAN 157 (243)
T ss_pred cccccccch--HhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHh-cCcccccccchHHHHHHHHHHhcC
Confidence 899999875 456788888765321 1 11 2234567999999998654 568899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhh---cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAIND---FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~---~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|+++|||||++|.||-+...+.+++.. .+.+|+++-|+..+...+|||.+++.+|+|. ..|+++++.+
T Consensus 158 P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vl-a~G~p~ei~~ 228 (243)
T COG1137 158 PKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVL-AEGSPEEIVN 228 (243)
T ss_pred CCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEE-ecCCHHHHhc
Confidence 999999999999999887777666654 4678999999999999999999999999997 6899988753
No 273
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.5e-39 Score=361.94 Aligned_cols=207 Identities=26% Similarity=0.391 Sum_probs=176.4
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhccc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELL 477 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~ 477 (629)
.+|+++||++.|+++. ++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++...++|++|++. +
T Consensus 3 ~~i~~~nls~~~~~~~-~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~--~ 79 (552)
T TIGR03719 3 YIYTMNRVSKVVPPKK-EILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ--L 79 (552)
T ss_pred EEEEEeeEEEecCCCC-eeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC--C
Confidence 4799999999996233 489999999999999999999999999999999999999999999987778999999863 3
Q ss_pred CCCCCHHHHHhhcC-------------------CChh----------------------hHHHHHHHHHHcCCCCccccc
Q psy10512 478 DLDISPLDYMLQSF-------------------PEVK----------------------DREEMRKIIGRYGLTGRQQVC 516 (629)
Q Consensus 478 ~~~~~~~~~~~~~~-------------------~~~~----------------------~~~~~~~~l~~~gl~~~~~~~ 516 (629)
....|+.+++.... +... ...++.++++.+|+.. .++
T Consensus 80 ~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~ 157 (552)
T TIGR03719 80 DPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPP--WDA 157 (552)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCc--ccC
Confidence 34567776653211 0000 0134566788888853 356
Q ss_pred CcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 517 PIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 517 ~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
++.+|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|.+++++||+||||++++..+||++++|++|+++
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~ 237 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGI 237 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEE
Confidence 78999999999999999999999999999999999999999999999999889999999999999999999999999987
Q ss_pred EecCCHHHHHHHH
Q psy10512 597 KWEGNILDYKETL 609 (629)
Q Consensus 597 ~~~g~~~~~~~~~ 609 (629)
.+.|++++|.+..
T Consensus 238 ~~~g~~~~~~~~~ 250 (552)
T TIGR03719 238 PWEGNYSSWLEQK 250 (552)
T ss_pred EecCCHHHHHHHH
Confidence 7899999887643
No 274
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=341.14 Aligned_cols=222 Identities=18% Similarity=0.257 Sum_probs=161.5
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC----CCCceEEEeecccCCCCCc
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP----VPDHIDIFHLTREMPASDK 158 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p----~~g~i~i~~~~~~~~~~~~ 158 (629)
+|+++||++.|++ ..+|+||||+|++||++||+|+||||||||+++|+|++.| ++|.|.+.+. ++.....
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~--~i~~~~~ 80 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ--DLQRISE 80 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE--ECCcCCH
Confidence 4899999999976 4799999999999999999999999999999999999874 6777766542 2211110
Q ss_pred chhhhhhhchHHHHHHHHHHHHHh-ccCC-hhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc--hhhhcccCCCC
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQLV-ACED-DESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK--EMQQKKTKDFS 234 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~~~~~~~~LS 234 (629)
...... .+..+..+.++.. .+.+ ......+.............+..+++.++|+.+||.. ...++++.+||
T Consensus 81 ~~~~~~-----r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 81 KERRNL-----VGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHHH-----hCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCC
Confidence 000000 0000111111100 0111 1111222111111112233455678899999999963 35688999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 235 GGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||+|||+|||||+.+|+||||||||++||+.++..++++|+++ +.|+|+||||++++..+||+|++|.+|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999888654 67999999999999999999999999999988
Q ss_pred cCcHH
Q psy10512 311 GGNYE 315 (629)
Q Consensus 311 ~g~~~ 315 (629)
+...+
T Consensus 236 g~~~~ 240 (326)
T PRK11022 236 GKAHD 240 (326)
T ss_pred CCHHH
Confidence 65443
No 275
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-39 Score=298.74 Aligned_cols=208 Identities=20% Similarity=0.298 Sum_probs=160.2
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|.++++.++|+..+. .++++|+.||+++|+|||||||||||++|+|++.|.+|++.|++.+..-.....
T Consensus 2 l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--------- 70 (231)
T COG3840 2 LALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--------- 70 (231)
T ss_pred ccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc---------
Confidence 678899999987653 578999999999999999999999999999999999999999765432211111
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh-ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD-DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..++++...+...+ +.++..+...-. .+ ....++++..++..+|+. .+.+|.+.+|||||||||+|||+
T Consensus 71 ----RPVSmlFQEnNLFaHLt-V~qNigLGl~P~LkL-~a~~r~~v~~aa~~vGl~-~~~~RLP~~LSGGqRQRvALARc 143 (231)
T COG3840 71 ----RPVSMLFQENNLFAHLT-VAQNIGLGLSPGLKL-NAEQREKVEAAAAQVGLA-GFLKRLPGELSGGQRQRVALARC 143 (231)
T ss_pred ----CChhhhhhccccchhhh-hhhhhcccCCccccc-CHHHHHHHHHHHHHhChh-hHhhhCccccCchHHHHHHHHHH
Confidence 11222333322222222 222221110000 11 234567889999999996 67899999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|+++-+|||||||+++|||.-+..+..++.++ +.|++||||.++.+.+++++++++++|+|.+.+..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~ 214 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGST 214 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccH
Confidence 99999999999999999999999888776544 68999999999999999999999999999976543
No 276
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-39 Score=344.40 Aligned_cols=187 Identities=24% Similarity=0.306 Sum_probs=160.0
Q ss_pred EeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------eeEEeeccchhcccCCC
Q psy10512 416 IYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------------LRFARYHQHLHELLDLD 480 (629)
Q Consensus 416 il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------------~~~~~~~q~~~~~~~~~ 480 (629)
+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.+++. ..++|++|... +...
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~--l~~~ 120 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA--LMPH 120 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc--CCCC
Confidence 799999999999999999999999999999999999999999998763 24889998753 4456
Q ss_pred CCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHH
Q psy10512 481 ISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMET 555 (629)
Q Consensus 481 ~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~ 555 (629)
.|+.+++... ++.....+++.++++.+||.... ++++.+|||||||||+|||||+.+|++|||||||++||+.+
T Consensus 121 ~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~-~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~ 199 (400)
T PRK10070 121 MTVLDNTAFGMELAGINAEERREKALDALRQVGLENYA-HSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLI 199 (400)
T ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh-hcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHH
Confidence 7888776432 12222345678899999997654 55779999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 556 IDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 556 ~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 200 r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~-~~g~~~~l~ 253 (400)
T PRK10070 200 RTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVV-QVGTPDEIL 253 (400)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEE-ecCCHHHHH
Confidence 99999998764 568999999999999999999999999997 467776654
No 277
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.4e-39 Score=324.80 Aligned_cols=210 Identities=22% Similarity=0.340 Sum_probs=155.5
Q ss_pred EEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++|++++|++ +++|+++||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +........
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~--~~~~~~~~~-- 77 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQS--LSKLSSNER-- 77 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--hhhcCHhHH--
Confidence 789999999974 579999999999999999999999999999999999999999998875422 111000000
Q ss_pred hhhchHHH-HHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 164 VMEVDEER-VRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
...+ ..+..+.+... +.+..+..++.................++.++++.+|+. +..++++.+|||||||||+
T Consensus 78 ----~~~~~~~i~~v~q~~~-~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~ 151 (221)
T TIGR02211 78 ----AKLRNKKLGFIYQFHH-LLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-HRINHRPSELSGGERQRVA 151 (221)
T ss_pred ----HHHHHhcEEEEecccc-cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHH
Confidence 0000 00111111111 111122222222211111222233456788999999996 5678999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||++++|++|+++
T Consensus 152 laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 152 IARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999999999988653 6799999999999965 8999999999875
No 278
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=334.32 Aligned_cols=217 Identities=22% Similarity=0.305 Sum_probs=162.8
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|+++|++++|+ +..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~~~~----- 75 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEP--ITKENIRE----- 75 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--CCcCCHHH-----
Confidence 489999999996 4569999999999999999999999999999999999999999999875432 11100000
Q ss_pred hchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
.+..+..+.+... ...+. +..++.........+......+++.++++.+|+. +..++.+.+||||||||++||
T Consensus 76 ----~~~~i~~v~q~~~~~~~~~-tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 76 ----VRKFVGLVFQNPDDQIFSP-TVEQDIAFGPINLGLDEETVAHRVSSALHMLGLE-ELRDRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred ----HHhheEEEecCcccccccc-cHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHHHHHH
Confidence 0000111111100 01111 2222222111111233334456788999999996 567899999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
|||+.+|+||||||||++||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|++++.+ +.+++
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g-~~~~~ 225 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYG-TVEEI 225 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEEC-CHHHH
Confidence 9999999999999999999999999999988653 689999999999999999999999999998765 44443
No 279
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.6e-39 Score=333.55 Aligned_cols=218 Identities=20% Similarity=0.293 Sum_probs=160.9
Q ss_pred eEEEEeEEEEeCC---------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCC
Q psy10512 87 DVKIANFSITFHG---------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASD 157 (629)
Q Consensus 87 ~i~i~nls~~y~~---------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~ 157 (629)
+|+++||+++|++ .++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+.+... ....
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~--~~~~ 81 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPL--HFGD 81 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEEC--CCCc
Confidence 5999999999962 4699999999999999999999999999999999999999999998764321 1100
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhh-ccChhhHHHHHHHHHHhCCCCchhhhcccCCCCh
Q psy10512 158 KSALTCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLD-DISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235 (629)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 235 (629)
.... +..+..+.++.. .+.+..+...+........ ........+.+.++++.+|+.....++++.+|||
T Consensus 82 ~~~~---------~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~ 152 (267)
T PRK15112 82 YSYR---------SQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAP 152 (267)
T ss_pred hhhH---------hccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCH
Confidence 0000 000000000000 0011111111111111111 1222334457889999999954567888999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~- 231 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVER- 231 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEec-
Confidence 9999999999999999999999999999999999999988764 67999999999999999999999999999865
Q ss_pred CcHHH
Q psy10512 312 GNYEA 316 (629)
Q Consensus 312 g~~~~ 316 (629)
++.+.
T Consensus 232 ~~~~~ 236 (267)
T PRK15112 232 GSTAD 236 (267)
T ss_pred CCHHH
Confidence 44443
No 280
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-39 Score=329.50 Aligned_cols=204 Identities=26% Similarity=0.329 Sum_probs=171.5
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
..+|+++||+++|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 5 VARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred ccEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 347999999999963 34899999999999999999999999999999999999999999998763 14
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC-C--------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF-P--------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
++|++|... +....++.+++.... + .......+.++++.+|+... .++++.+|||||+|||+|||||+
T Consensus 83 i~~v~q~~~--~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~Gq~qrv~laral~ 159 (265)
T PRK10253 83 IGLLAQNAT--TPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-ADQSVDTLSGGQRQRAWIAMVLA 159 (265)
T ss_pred eEEeeccCc--CCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-hcCCcccCChHHHHHHHHHHHHh
Confidence 788888753 334567777664321 1 11233467889999999754 35678999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
.+|++|||||||+|||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|++.++.
T Consensus 160 ~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 232 (265)
T PRK10253 160 QETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV-AQGAPKEIV 232 (265)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999998765 458999999999999999999999999997 468776654
No 281
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=333.52 Aligned_cols=218 Identities=21% Similarity=0.269 Sum_probs=162.5
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
+|+++|++++|+ +..+|+|+||+|.+||+++|+||||||||||+++|+|+++|..|++.+.+............
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~----- 75 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLE----- 75 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHH-----
Confidence 378999999997 46799999999999999999999999999999999999999999988765322110000000
Q ss_pred hchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
.+..+..+.+... ...+.+..+++ ................++.++++.+|+. ++.++++.+|||||+||++||
T Consensus 76 ----~~~~i~~v~q~~~~~~~~~tv~e~i-~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~Gq~qrv~la 149 (275)
T PRK13639 76 ----VRKTVGIVFQNPDDQLFAPTVEEDV-AFGPLNLGLSKEEVEKRVKEALKAVGME-GFENKPPHHLSGGQKKRVAIA 149 (275)
T ss_pred ----HHhheEEEeeChhhhhccccHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHCCCc-hhhcCChhhCCHHHHHHHHHH
Confidence 0000111111100 01111222222 1111111122334456788999999996 578899999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++++.+. .+.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~-~~~ 223 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGT-PKE 223 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC-HHH
Confidence 9999999999999999999999999999988765 6799999999999999999999999999997754 443
No 282
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-39 Score=326.33 Aligned_cols=204 Identities=22% Similarity=0.265 Sum_probs=169.8
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~--------- 463 (629)
++|+++||++.|++ . .+|+++||+|++|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~l~~~~l~~~~~~-~-~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 2 NKIEIRDLKVSFGQ-V-EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred ceEEEEeeEEEECC-e-eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 36899999999964 3 489999999999999999999999999999999999984 7999998763
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhcC-------CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQSF-------PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|... +....|+.+++.... ......+.+.++++.+|+.. ...+.++.+|||||||||+|
T Consensus 80 ~~~~i~~v~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 157 (250)
T PRK14247 80 LRRRVQMVFQIPN--PIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCI 157 (250)
T ss_pred HhccEEEEeccCc--cCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHH
Confidence 24788888753 344567877764211 11122356788999999853 12356789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+.+++.
T Consensus 158 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 233 (250)
T PRK14247 158 ARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIV-EWGPTREVF 233 (250)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEE-EECCHHHHH
Confidence 99999999999999999999999999999999876 468999999999999999999999999996 468776653
No 283
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-39 Score=318.81 Aligned_cols=191 Identities=27% Similarity=0.389 Sum_probs=161.9
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|+++|++++|++ . . .++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 i~~~~l~~~~~~--~-~-~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 76 (211)
T cd03298 1 VRLDKIRFSYGE--Q-P-MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLF 76 (211)
T ss_pred CEEEeEEEEeCC--E-e-cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEe
Confidence 468999999953 2 2 3999999999999999999999999999999999999999998773 2478998
Q ss_pred cchhcccCCCCCHHHHHhhcCC-----ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQSFP-----EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|... +....++.+++..... .....+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++||||
T Consensus 77 q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~ia~al~~~p~llllD 153 (211)
T cd03298 77 QENN--LFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLE-KRLPGELSGGERQRVALARVLVRDKPVLLLD 153 (211)
T ss_pred cccc--cCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHH-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8753 3445688887643221 112345678899999997544 4577999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||++||+.+++.+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 999999999999999999765 4689999999999999999999999999863
No 284
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=331.12 Aligned_cols=217 Identities=19% Similarity=0.267 Sum_probs=160.3
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++.+|+|+||+|++|+++||+|+||||||||+++|+|+++| ++|+|.+.+.. +.......
T Consensus 12 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~--i~~~~~~~- 88 (258)
T PRK14268 12 QIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGED--IYEPDVDV- 88 (258)
T ss_pred eEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEE--cccccchH-
Confidence 59999999999988899999999999999999999999999999999999875 68888765422 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCC---chhhhcccCCCChHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFT---KEMQQKKTKDFSGGWR 238 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGqr 238 (629)
...+..+..+.+....+ +. +..++..+..............++.++++.+|+. ....++++.+|||||+
T Consensus 89 ------~~~~~~i~~v~q~~~~~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 89 ------VELRKNVGMVFQKPNPF-PM-SIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQ 160 (258)
T ss_pred ------HHHhhhEEEEecCCccC-cc-cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHH
Confidence 00000011111111111 11 2222222211111222233345678899999884 2456788999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
|||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++++.+.+.
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 238 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTR 238 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999988765 579999999999999999999999999998775443
No 285
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-39 Score=309.38 Aligned_cols=205 Identities=23% Similarity=0.361 Sum_probs=174.0
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
++|+++||+..|+. ..+|++|||++++||+++|+|+||+|||||||+|+|+.+|.+|+|.++|. ..
T Consensus 2 ~mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 2 PMLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred CceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 58999999999964 45999999999999999999999999999999999999999999999873 46
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcCCCh----hhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSFPEV----KDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
++|++|.. .++..+|+.+++..+.... ......+++.+.|---....+++.++|||||||.++|||||+.+|++
T Consensus 80 i~~VPegR--~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pkl 157 (237)
T COG0410 80 IAYVPEGR--RIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKL 157 (237)
T ss_pred eEeCcccc--cchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCE
Confidence 88999874 3567899999886432111 11122566777775333445678899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhcC----ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDFE----GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~~----~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||||.||-|.-.+.|.+.|+++. .||++|.++..++..++||.++|++|+|+ ++|+.++...
T Consensus 158 LLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv-~~G~~~eL~~ 226 (237)
T COG0410 158 LLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV-LSGTAAELLA 226 (237)
T ss_pred EEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-EecCHHHHhc
Confidence 99999999999999999999887763 38999999999999999999999999997 7898877754
No 286
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=334.24 Aligned_cols=213 Identities=24% Similarity=0.320 Sum_probs=159.2
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCc-chhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDK-SALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~-~~~~~~ 164 (629)
+|+++|++++|+ +..+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +..... ..+
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~--~~~~~~~~~~--- 75 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGID--TGDFSKLQGI--- 75 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE--CCccccHHHH---
Confidence 378999999995 5679999999999999999999999999999999999999999999876432 111000 000
Q ss_pred hhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
+..+..+.+... .+... +..++................+++.++++.+|+. ...++++.+|||||+|||+|
T Consensus 76 ------~~~i~~v~q~~~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrv~l 147 (274)
T PRK13644 76 ------RKLVGIVFQNPETQFVGR-TVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLE-KYRHRSPKTLSGGQGQCVAL 147 (274)
T ss_pred ------HhheEEEEEChhhhcccc-hHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-HHhcCCcccCCHHHHHHHHH
Confidence 000000000000 00111 1122211111111223344556788899999996 56789999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||||+.+|+||||||||++||+.++..+++.|+++ +.|||++|||++++. .||+|++|++|++++.+.+
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~ 219 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVLEGEP 219 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999988654 689999999999995 6999999999999876544
No 287
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.2e-39 Score=327.91 Aligned_cols=201 Identities=27% Similarity=0.355 Sum_probs=169.9
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|++ ..+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 679999999953 34899999999999999999999999999999999999999999998773 13788
Q ss_pred eccchhcccCCCCCHHHHHhhcC---------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSF---------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAP 539 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 539 (629)
++|... +....++.+++.... ......+.+.++++.+|+... .++++.+|||||+|||+|||||+.+|
T Consensus 80 ~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 80 VEQDSD--TAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHL-ADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred ecccCc--cCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhh-hcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 888753 334567777764321 111223467889999999754 45678999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 540 HLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 540 ~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||+|++|++|+++ ..|+.+++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 225 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVV-AAGPPREVL 225 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEE-EecCHHHhh
Confidence 999999999999999999999999876 468999999999999999999999999997 568877664
No 288
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-39 Score=327.26 Aligned_cols=204 Identities=22% Similarity=0.263 Sum_probs=167.6
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
.++|+++|+++.|++ . .+|+|+||+|.+|+++||+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 10 ~~~l~~~~l~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 10 QPQIKVENLNLWYGE-K-QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred ceeEEEeeeEEEeCC-e-eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 468999999999963 3 489999999999999999999999999999999999985 8999988652
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +.. .++.+++... .......+.+.++++.+|+.. ....+++.+|||||+|||+
T Consensus 88 ~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 164 (258)
T PRK14268 88 VVELRKNVGMVFQKPN--PFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLC 164 (258)
T ss_pred HHHHhhhEEEEecCCc--cCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHH
Confidence 13678887653 222 6777766421 111112345778999999842 2234678999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++.
T Consensus 165 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 241 (258)
T PRK14268 165 IARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELI-EFGQTRQIF 241 (258)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999999999876 468999999999999999999999999997 467776653
No 289
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=330.26 Aligned_cols=204 Identities=22% Similarity=0.285 Sum_probs=165.7
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------eeEEee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------LRFARY 469 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------~~~~~~ 469 (629)
.+|+++||++.|+++. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 5 ~~l~~~~l~~~~~~~~-~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v 83 (272)
T PRK15056 5 AGIVVNDVTVTWRNGH-TALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYV 83 (272)
T ss_pred ceEEEEeEEEEecCCc-EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEe
Confidence 3689999999996333 4899999999999999999999999999999999999999999998873 248888
Q ss_pred ccchhcccCCCCCHHHHHhhc---------CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 470 HQHLHELLDLDISPLDYMLQS---------FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+|+.........++.+++... .+.....+.+.++++.+|+.... ++++.+|||||+|||+|||||+.+|+
T Consensus 84 ~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrv~laraL~~~p~ 162 (272)
T PRK15056 84 PQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-HRQIGELSGGQKKRVFLARAIAQQGQ 162 (272)
T ss_pred ccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-cCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 887532111222333332110 01112345677889999997544 56789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||||+|||+.+++.+.+.|.++ +.|||+||||++++..+||+++++ +|+++ ..|+.+++
T Consensus 163 llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~-~~g~~~~~ 228 (272)
T PRK15056 163 VILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVL-ASGPTETT 228 (272)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEE-eecCHHhc
Confidence 99999999999999999999999876 468999999999999999999877 89987 46777664
No 290
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.1e-39 Score=329.97 Aligned_cols=222 Identities=19% Similarity=0.244 Sum_probs=160.8
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeeccc---CCCCCcchhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTRE---MPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~---~~~~~~~~~~~ 163 (629)
+|+++|+++.|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|++.+.+.... +..........
T Consensus 6 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~~~ 85 (258)
T PRK11701 6 LLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAERRR 85 (258)
T ss_pred eEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHHHH
Confidence 599999999999888999999999999999999999999999999999999999999987543200 11000000000
Q ss_pred hhhchHHHHHHHHHHHHHh--ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLV--ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
..+..+..+.++.. ........+++.................++.++++.+|+.....++.+.+|||||||||
T Consensus 86 -----~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl 160 (258)
T PRK11701 86 -----LLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRL 160 (258)
T ss_pred -----HhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHH
Confidence 00000000111100 00001111121111101111112234567888999999964467889999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+|||||+.+|+||||||||++||+.+..++++.|+++ +.|||+||||++++..+||+|++|++|++++.+.+
T Consensus 161 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 161 QIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999987643 67999999999999999999999999999876543
No 291
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=329.03 Aligned_cols=216 Identities=25% Similarity=0.311 Sum_probs=161.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +......
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~--~~~~~~~------- 72 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRP--LADWSPA------- 72 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEE--cccCCHH-------
Confidence 4899999999998899999999999999999999999999999999999999999999875432 1100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..+.+.....+.. +..++.................++.++++.+|+. +..++.+.+|||||||||+||||
T Consensus 73 --~~~~~i~~~~q~~~~~~~~-tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 73 --ELARRRAVLPQHSSLSFPF-TVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLA-HLAGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred --HhhhheEEEccCCcCCCCC-CHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHH
Confidence 0000111111111111112 2222222111111111223345678899999996 56789999999999999999999
Q ss_pred Hc------cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 247 LY------VKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 247 L~------~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|+ .+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++.. ++.++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~ 227 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVAD-GTPAE 227 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEee-CCHHH
Confidence 99 599999999999999999999999888654 57999999999999999999999999999865 44443
No 292
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-39 Score=330.23 Aligned_cols=205 Identities=24% Similarity=0.369 Sum_probs=169.3
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
.++|+++|+++.|+++...+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 5 SVMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred ceEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 4689999999999632334899999999999999999999999999999999999999999998762 23
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.... .....|+.+++... +........+.++++.+|+.... ++++.+|||||+|||+|||||+.+|+
T Consensus 85 i~~v~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~ 162 (271)
T PRK13632 85 IGIIFQNPDN-QFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-DKEPQNLSGGQKQRVAIASVLALNPE 162 (271)
T ss_pred eEEEEeCHHH-hcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-hCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7888887531 22346777776431 11112234578899999997544 45779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||||+|||+.++..+.++|.++ +.|||++|||++++. +||++++|++|+++ ..|+.+++
T Consensus 163 lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~-~~g~~~~~ 229 (271)
T PRK13632 163 IIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLI-AQGKPKEI 229 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEE-EecCHHHH
Confidence 99999999999999999999999875 268999999999996 79999999999997 45776654
No 293
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=329.72 Aligned_cols=215 Identities=20% Similarity=0.299 Sum_probs=160.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|+++.|+++++|+++||+|.+|++++|+||||||||||+++|+|+++|++|++.+.+.. +........
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~~----- 77 (255)
T PRK11300 5 LLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQH--IEGLPGHQI----- 77 (255)
T ss_pred eEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEE--CCCCCHHHH-----
Confidence 5999999999998899999999999999999999999999999999999999999999876432 111000000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh---------hhhc---cC--hhhHHHHHHHHHHhCCCCchhhhcccCC
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD---------RLDD---IS--ADTAEARAANILHGLGFTKEMQQKKTKD 232 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~---~~--~~~~~~~~~~~L~~lgl~~~~~~~~~~~ 232 (629)
.+..+....++...++..+..+++..... .+.. .. .......+.++++.+|+. +..++++.+
T Consensus 78 ---~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~ 153 (255)
T PRK11300 78 ---ARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-EHANRQAGN 153 (255)
T ss_pred ---HhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-hhhhCChhh
Confidence 00000001111111111122222211000 0000 00 112335678889999996 568899999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEE
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLK 308 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~ 308 (629)
|||||||||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++
T Consensus 154 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 233 (255)
T PRK11300 154 LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPL 233 (255)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 9999999999999999999999999999999999999999988653 679999999999999999999999999998
Q ss_pred EEcC
Q psy10512 309 YYGG 312 (629)
Q Consensus 309 ~~~g 312 (629)
+.+.
T Consensus 234 ~~~~ 237 (255)
T PRK11300 234 ANGT 237 (255)
T ss_pred ecCC
Confidence 7644
No 294
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=331.29 Aligned_cols=213 Identities=23% Similarity=0.314 Sum_probs=160.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+... ......
T Consensus 11 ~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~--~~~~~~------- 81 (265)
T PRK10575 11 TFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPL--ESWSSK------- 81 (265)
T ss_pred eEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEeh--hhCCHH-------
Confidence 59999999999988999999999999999999999999999999999999999999998754321 100000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhh-hh---ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDR-LD---DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~---~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
..+..+..+.+..... +..+..++...... .. .........++..+++.+|+. +..++++.+|||||||||+
T Consensus 82 --~~~~~i~~v~q~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~ 157 (265)
T PRK10575 82 --AFARKVAYLPQQLPAA-EGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLK-PLAHRLVDSLSGGERQRAW 157 (265)
T ss_pred --HHhhheEEeccCCCCC-CCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCCHHHHHHHH
Confidence 0000111111111111 11122222221100 00 011122345688899999996 5678899999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++..+.
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~ 231 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGT 231 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecC
Confidence 999999999999999999999999999998888654 6899999999999999999999999999986643
No 295
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-39 Score=329.17 Aligned_cols=216 Identities=23% Similarity=0.265 Sum_probs=159.3
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcch
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
..|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+.. |++|++.+.+.. +.......
T Consensus 5 ~~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~--i~~~~~~~ 82 (253)
T PRK14242 5 PKMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGEN--IYDPHVDV 82 (253)
T ss_pred cEEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEE--ccccccCH
Confidence 36999999999998889999999999999999999999999999999999864 467887765432 11100000
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
...+..+..+.+....+ +. +..++.......... ......+++.++++.+|+.. ...++++.+||||
T Consensus 83 -------~~~~~~i~~v~q~~~~~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG 153 (253)
T PRK14242 83 -------VELRRRVGMVFQKPNPF-PK-SIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGG 153 (253)
T ss_pred -------HHHhhcEEEEecCCCCC-cC-cHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHH
Confidence 00000111111111111 12 222222211111111 12234567888999999852 3457889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 154 q~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~ 231 (253)
T PRK14242 154 QQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGP 231 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999998865 4799999999999999999999999999987654
No 296
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-39 Score=323.81 Aligned_cols=214 Identities=21% Similarity=0.324 Sum_probs=158.2
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhh
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
+|+++||++.|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.........
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQP--MSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--cCcCCHHHHH
Confidence 5999999999974 579999999999999999999999999999999999999999998875432 1111000000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
.. .+..+..+.+....+ +..+..++......+..........++.++++.+|+. +..++.+.+|||||||||+
T Consensus 83 ~~-----~~~~i~~v~q~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qrl~ 155 (233)
T PRK11629 83 EL-----RNQKLGFIYQFHHLL-PDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-HRANHRPSELSGGERQRVA 155 (233)
T ss_pred HH-----HhccEEEEecCcccC-CCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCChhhCCHHHHHHHH
Confidence 00 000000111111111 1112222222211111223334456788999999996 5678889999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+ |++++|++|+++..
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~~ 226 (233)
T PRK11629 156 IARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTAE 226 (233)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEEE
Confidence 999999999999999999999999999999988754 57999999999999875 69999999999864
No 297
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-39 Score=325.87 Aligned_cols=204 Identities=23% Similarity=0.237 Sum_probs=168.1
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~--------- 463 (629)
++|+++||++.|+. . .+|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~-~-~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 3 FAIETVNLRVYYGS-N-HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred ceEEEEeEEEEeCC-e-eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 47999999999963 3 489999999999999999999999999999999999997 4999988753
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC-------CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF-------PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +....++.+++.... +.....+.+.++++.+|+.. .....++.+|||||||||
T Consensus 81 ~~~~~~i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14267 81 IEVRREVGMVFQYPN--PFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRL 158 (253)
T ss_pred HHHhhceeEEecCCc--cCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHH
Confidence 13678887743 334567777664211 11122345778899999842 123457799999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 236 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLI-EVGPTRKVF 236 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999999999999999999876 368999999999999999999999999997 467776653
No 298
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=329.83 Aligned_cols=213 Identities=22% Similarity=0.273 Sum_probs=160.8
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.|+++|++++|+++.+|+|+||+|.+|++++|+|||||||||||++|+|+++|+.|++.+.+.. +......
T Consensus 7 ~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~--~~~~~~~------- 77 (265)
T PRK10253 7 RLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEH--IQHYASK------- 77 (265)
T ss_pred EEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEE--hhhCCHH-------
Confidence 5999999999999899999999999999999999999999999999999999999998775421 1110000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHh-hh---hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYD-RL---DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l---~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
..+..+....++...+.. .+..++..... .. ..........++.++++.+|+. +..++++.+||||||||++
T Consensus 78 --~~~~~i~~v~q~~~~~~~-~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~ 153 (265)
T PRK10253 78 --EVARRIGLLAQNATTPGD-ITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGIT-HLADQSVDTLSGGQRQRAW 153 (265)
T ss_pred --HHhhheEEeeccCcCCCC-CcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-HHhcCCcccCChHHHHHHH
Confidence 000011111111111111 12222221110 00 0001122345678899999996 5679999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 154 laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~ 227 (265)
T PRK10253 154 IAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGA 227 (265)
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999988654 6799999999999999999999999999987654
No 299
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-39 Score=330.63 Aligned_cols=206 Identities=23% Similarity=0.328 Sum_probs=169.4
Q ss_pred CeEEEEEEEEEEcCC----CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc----------
Q psy10512 398 PVIMVQNVSFRYSDD----GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~----~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------- 463 (629)
++|+++|++++|+.. ...+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 579999999999632 234999999999999999999999999999999999999999999998762
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..++|++|.+...+. ..++.+++... .+.....+.+.++++.+||.... ++++.+|||||+|||+|||||+
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LS~G~~qrv~laral~ 160 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYR-RHAPHLLSGGQKQRVAIAGILA 160 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHh-hCCcccCCHHHHHHHHHHHHHH
Confidence 136788887532222 24566554321 11112345678899999997544 5578999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.. ||++++|++|+++ ..|+++++..
T Consensus 161 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~-~~g~~~~~~~ 233 (280)
T PRK13633 161 MRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVV-MEGTPKEIFK 233 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEE-EecCHHHHhc
Confidence 999999999999999999999999999865 4689999999999976 9999999999997 4688777643
No 300
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=329.01 Aligned_cols=217 Identities=18% Similarity=0.271 Sum_probs=160.5
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcch
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
..|+++|+++.|++..+|+|+||+|++|++++|+||||||||||+++|+|++. |+.|++.+.+.. +.......
T Consensus 12 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~--~~~~~~~~ 89 (260)
T PRK10744 12 SKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGEN--ILTPKQDI 89 (260)
T ss_pred ceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEE--ccccccch
Confidence 35999999999998889999999999999999999999999999999999986 467888765432 11000000
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhh-hccChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRL-DDISADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
...+..+..+.++...+ +.+..+++ ...... ..........++.++++.+|+.. ...++.+.+||||
T Consensus 90 -------~~~~~~i~~~~q~~~~~-~~tv~~nl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 90 -------ALLRAKVGMVFQKPTPF-PMSIYDNI-AFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGG 160 (260)
T ss_pred -------HHHhcceEEEecCCccC-cCcHHHHH-hhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHH
Confidence 00000011111111111 11222222 211111 11223334567888999999842 3567889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|+|||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..+..
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998776 47999999999999999999999999999987644
No 301
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-39 Score=344.39 Aligned_cols=218 Identities=24% Similarity=0.337 Sum_probs=161.3
Q ss_pred eEEEEeEEEEeCCee------------------------eeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCC
Q psy10512 87 DVKIANFSITFHGCE------------------------LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPD 142 (629)
Q Consensus 87 ~i~i~nls~~y~~~~------------------------~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g 142 (629)
.|+++||++.||..+ +|+|+||+|++||+++|+|||||||||||++|+|++.|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 477777777776543 89999999999999999999999999999999999999999
Q ss_pred ceEEEeecccCCCCCcchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCC
Q psy10512 143 HIDIFHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFT 222 (629)
Q Consensus 143 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~ 222 (629)
+|.+.+.. +.......+.. ..+..+.++.++...++..+ ..++..+...+..+......+++.++++.+||.
T Consensus 84 ~I~i~G~~--i~~~~~~~l~~-----~~~~~igyv~Q~~~l~~~~T-v~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~ 155 (400)
T PRK10070 84 QVLIDGVD--IAKISDAELRE-----VRRKKIAMVFQSFALMPHMT-VLDNTAFGMELAGINAEERREKALDALRQVGLE 155 (400)
T ss_pred EEEECCEE--CCcCCHHHHHH-----HHhCCEEEEECCCcCCCCCC-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC
Confidence 99875432 11110000000 00000111111111122222 233222222222233344456788999999997
Q ss_pred chhhhcccCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcce
Q psy10512 223 KEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTN 298 (629)
Q Consensus 223 ~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ 298 (629)
+..++++.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|.++ ++|||+||||++++..+||+
T Consensus 156 -~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dr 234 (400)
T PRK10070 156 -NYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDR 234 (400)
T ss_pred -hhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCE
Confidence 5678999999999999999999999999999999999999999999999988653 67999999999999999999
Q ss_pred eEEEcCCeEEEEcCc
Q psy10512 299 IIHLDKRKLKYYGGN 313 (629)
Q Consensus 299 ii~l~~G~i~~~~g~ 313 (629)
|++|++|+++..+.+
T Consensus 235 i~vL~~G~i~~~g~~ 249 (400)
T PRK10070 235 IAIMQNGEVVQVGTP 249 (400)
T ss_pred EEEEECCEEEecCCH
Confidence 999999999876543
No 302
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.1e-39 Score=320.73 Aligned_cols=198 Identities=28% Similarity=0.390 Sum_probs=166.9
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------eeEEeeccc
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------LRFARYHQH 472 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------~~~~~~~q~ 472 (629)
|+++|+++.|+. . .+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++|.
T Consensus 1 l~l~~v~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~ 78 (223)
T TIGR03740 1 LETKNLSKRFGK-Q-TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIES 78 (223)
T ss_pred CEEEeEEEEECC-E-EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCC
Confidence 478999999963 3 4899999999999999999999999999999999999999999998764 247788876
Q ss_pred hhcccCCCCCHHHHHhhc--CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q psy10512 473 LHELLDLDISPLDYMLQS--FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNH 550 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~ 550 (629)
.. +....++.+++... ... .....+.++++.+|+.... ++++.+|||||+|||+||||++.+|++|||||||+|
T Consensus 79 ~~--~~~~~t~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~ 154 (223)
T TIGR03740 79 PP--LYENLTARENLKVHTTLLG-LPDSRIDEVLNIVDLTNTG-KKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNG 154 (223)
T ss_pred CC--ccccCCHHHHHHHHHHHcC-CCHHHHHHHHHHcCCcHHH-hhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 43 33456777765421 111 1345678899999997544 457799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 551 LDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 551 LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
||+.+++.+.+.|.++ +.+||++|||.+++..+||++++|++|+++. .|++.+
T Consensus 155 LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~ 210 (223)
T TIGR03740 155 LDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGY-QGKINK 210 (223)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE-ecChhh
Confidence 9999999999999876 4589999999999999999999999999974 566543
No 303
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=325.39 Aligned_cols=204 Identities=22% Similarity=0.260 Sum_probs=168.1
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
.++|+++|+++.|++ . .+|+++||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 5 ~~~l~~~~l~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 5 EAIIETENLNLFYTD-F-KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred CceEEEeeeEEEeCC-c-eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 458999999999963 3 489999999999999999999999999999999999997 4899988652
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhcC-----CC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQSF-----PE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|+... + ..++.+++.... .. ....+.+..+++.+++.. ...++++.+|||||||||
T Consensus 83 ~~~~~~~i~~v~q~~~~-~--~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv 159 (254)
T PRK14273 83 ILELRRKIGMVFQTPNP-F--LMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRL 159 (254)
T ss_pred HHHHhhceEEEeecccc-c--cCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHH
Confidence 137788887532 2 367887664321 11 122456778888888731 223457799999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+..++.
T Consensus 160 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 237 (254)
T PRK14273 160 CIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIE-EESSTDELF 237 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999999999999999999887 368999999999999999999999999997 467776654
No 304
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.3e-39 Score=323.76 Aligned_cols=213 Identities=23% Similarity=0.314 Sum_probs=156.9
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhh
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
+|+++||+++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +...+.....
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~--~~~~~~~~~~ 83 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQP--LHQMDEEARA 83 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEE--cccCCHHHHH
Confidence 5999999999975 369999999999999999999999999999999999999999998775432 1110000000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
. ..+..+..+.+....+...+..+++. ..............+++.++++.+|+. +..++++.+||||||||++
T Consensus 84 ~-----~~~~~i~~~~q~~~l~~~~tv~~~l~-~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Ge~qrl~ 156 (228)
T PRK10584 84 K-----LRAKHVGFVFQSFMLIPTLNALENVE-LPALLRGESSRQSRNGAKALLEQLGLG-KRLDHLPAQLSGGEQQRVA 156 (228)
T ss_pred H-----HHhheEEEEEcccccCCCcCHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHH
Confidence 0 00000111111111111112222221 111111222234456788999999996 5678899999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEE
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKY 309 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~ 309 (629)
|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++. .||++++|++|++++
T Consensus 157 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 157 LARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAA-RCDRRLRLVNGQLQE 226 (228)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEe
Confidence 999999999999999999999999999999988653 679999999999986 599999999999874
No 305
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-39 Score=328.30 Aligned_cols=217 Identities=18% Similarity=0.263 Sum_probs=159.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+..| ++|+|.+.+.. +.......
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~--~~~~~~~~- 80 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGED--LYGPGVDP- 80 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEe--ccccccCh-
Confidence 58999999999988999999999999999999999999999999999999874 57888775432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc-cChhhHHHHHHHHHHhCCCC---chhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD-ISADTAEARAANILHGLGFT---KEMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....++..+..+++ ........ .......+++.++++.+|+. .+..++++.+|||||
T Consensus 81 ------~~~~~~i~~~~q~~~~~~~~tv~~nl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 ------VAVRRTIGMVFQRPNPFPTMSIRDNV-VAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQ 153 (258)
T ss_pred ------HHHhcceEEEccccccCCCCcHHHHH-HHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHH
Confidence 00000011111111111112222222 21111111 12233456788899999984 245678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEc------CCeEEE
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLD------KRKLKY 309 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~------~G~i~~ 309 (629)
||||+|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|+ +|++++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999988765 5799999999999999999999996 799987
Q ss_pred EcCc
Q psy10512 310 YGGN 313 (629)
Q Consensus 310 ~~g~ 313 (629)
.+.+
T Consensus 234 ~~~~ 237 (258)
T PRK14241 234 IDDT 237 (258)
T ss_pred cCCH
Confidence 7544
No 306
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.8e-39 Score=323.23 Aligned_cols=198 Identities=22% Similarity=0.296 Sum_probs=156.5
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
+.++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+........
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~----------- 91 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLLGL----------- 91 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhhcc-----------
Confidence 778999999999999999999999999999999999999999999999999999998875432110000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..... +..+..++.................++.++++.+|+. +..++++.+||||||||++|||||
T Consensus 92 ------------~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~~qrv~laral 157 (224)
T cd03220 92 ------------GGGFN-PELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELG-DFIDLPVKTYSSGMKARLAFAIAT 157 (224)
T ss_pred ------------cccCC-CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hhhhCChhhCCHHHHHHHHHHHHH
Confidence 00001 1111222221111111122233345678889999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++..
T Consensus 158 ~~~p~llllDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 223 (224)
T cd03220 158 ALEPDILLIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFD 223 (224)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999988764 57999999999999999999999999998754
No 307
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-40 Score=309.73 Aligned_cols=221 Identities=22% Similarity=0.309 Sum_probs=170.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.+.++||.|+|+.+.++++|||+|++||++||+|||||||||.+.++.|+..|++|.|.+...+ +...+..
T Consensus 4 ~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~d--iT~lPm~------- 74 (243)
T COG1137 4 TLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDED--ITKLPMH------- 74 (243)
T ss_pred EEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcc--cccCChH-------
Confidence 4889999999999999999999999999999999999999999999999999999999876432 2221110
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChh--hHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISAD--TAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
...+..+.++.|+...+-..+..++++.+.+. ...+.. +.+.++..+|+.|++. +..+.+..+||||||+|+.||
T Consensus 75 -~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~-~~~d~~~~~~~~~l~~LL~ef~i~-hlr~~~a~sLSGGERRR~EIA 151 (243)
T COG1137 75 -KRARLGIGYLPQEASIFRKLTVEDNIMAVLEI-REKDLKKAERKEELDALLEEFHIT-HLRDSKAYSLSGGERRRVEIA 151 (243)
T ss_pred -HHhhcCcccccccchHhhcCcHHHHHHHHHhh-hhcchhHHHHHHHHHHHHHHhchH-HHhcCcccccccchHHHHHHH
Confidence 01111222232222222233334444444332 222222 3344577999999996 688999999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHH---HhhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHHHH
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEE---LKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCK 319 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~---L~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~~~ 319 (629)
|||+.+|+.+|||||++|.||-++..+.++ |++.+..|+|+.|+..+...+|||.++|.+|++.+.|.+.+.+..
T Consensus 152 RaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 152 RALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999998766655 555678999999999999999999999999999988777655443
No 308
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.6e-39 Score=327.70 Aligned_cols=213 Identities=24% Similarity=0.307 Sum_probs=160.6
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|+++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +......
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~--~~~~~~~-------- 71 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVD--LHGLSRR-------- 71 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEE--cccCCHH--------
Confidence 789999999999999999999999999999999999999999999999999999998875432 1110000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhh---hhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDR---LDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
..+..+..+.++.......+..+++...... +..........++.++++.+|+. +..++++.+|||||+|||+||
T Consensus 72 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la 149 (256)
T TIGR03873 72 -ARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-HLADRDMSTLSGGERQRVHVA 149 (256)
T ss_pred -HHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHH
Confidence 0000111111111111111222222111000 00111223345788899999996 678899999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||+.+|+||||||||++||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++..+.
T Consensus 150 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 220 (256)
T TIGR03873 150 RALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGP 220 (256)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecC
Confidence 9999999999999999999999999999988765 6799999999999999999999999999987643
No 309
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-39 Score=318.89 Aligned_cols=206 Identities=20% Similarity=0.275 Sum_probs=154.1
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+ |+||+|.+|++++|+||||||||||+++|+|+++|++|++.+.+.. +......
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~--~~~~~~~-------- 68 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVD--VTAAPPA-------- 68 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEE--cCcCCHh--------
Confidence 468999999987653 9999999999999999999999999999999999999998775432 1110000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
+..+..+.+....++..+..+++ ..............+.++.++++.+|+. +..++++.+||||||||++|||||
T Consensus 69 ---~~~i~~~~q~~~~~~~~tv~enl-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 69 ---DRPVSMLFQENNLFAHLTVEQNV-GLGLSPGLKLTAEDRQAIEVALARVGLA-GLEKRLPGELSGGERQRVALARVL 143 (211)
T ss_pred ---HccEEEEecccccCCCCcHHHHH-hcccccccCccHHHHHHHHHHHHHcCCH-HHHhCCcccCCHHHHHHHHHHHHH
Confidence 00000111111111111222222 1111100000123355788999999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~ 210 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQ 210 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeec
Confidence 9999999999999999999999999988754 67999999999999999999999999998753
No 310
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3e-39 Score=342.14 Aligned_cols=212 Identities=24% Similarity=0.318 Sum_probs=161.1
Q ss_pred EEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchHHHHHH
Q psy10512 95 ITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRL 174 (629)
Q Consensus 95 ~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (629)
|.|+++.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.+.+.. +...+...+. ...+..+
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~--i~~~~~~~~~-----~~rr~~i 73 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGEN--IMKQSPVELR-----EVRRKKI 73 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEE--CCcCCHHHHH-----HHHhCcE
Confidence 46888899999999999999999999999999999999999999999999876532 2111100000 0001111
Q ss_pred HHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHccCCCEE
Q psy10512 175 EKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLL 254 (629)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iL 254 (629)
.+++++...++..+..+++ .+...+..+...+..+++.++|+.+||. .+.++++.+|||||||||+|||||+.+|+||
T Consensus 74 ~~v~Q~~~l~~~~TV~eNi-~~~~~~~~~~~~~~~~~~~~~l~~vgL~-~~~~~~p~~LSGGq~QRV~lARAL~~~p~iL 151 (363)
T TIGR01186 74 GMVFQQFALFPHMTILQNT-SLGPELLGWPEQERKEKALELLKLVGLE-EYEHRYPDELSGGMQQRVGLARALAAEPDIL 151 (363)
T ss_pred EEEECCCcCCCCCCHHHHH-HHHHHHcCCCHHHHHHHHHHHHHhcCCc-hhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 1222222222222333333 2222222334445667899999999996 5789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 255 LLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 255 LLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
||||||++||+.++.++.+.|.++ ++|||+||||++++..+||+|++|++|+++..+.+.+
T Consensus 152 LlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~e 216 (363)
T TIGR01186 152 LMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDE 216 (363)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 999999999999999999987643 6899999999999999999999999999998765443
No 311
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=325.11 Aligned_cols=204 Identities=23% Similarity=0.281 Sum_probs=168.0
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~-------- 463 (629)
..+|+++|+++.|++ . .+|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 11 ~~~l~~~~l~~~~~~-~-~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK-F-HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC-e-EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 457999999999963 3 48999999999999999999999999999999999986 58999988762
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +. ..++.+++... .......+++.++++.+++.. ....+++.+|||||+|||
T Consensus 89 ~~~~~~~i~~~~q~~~--~~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 165 (260)
T PRK10744 89 IALLRAKVGMVFQKPT--PF-PMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRL 165 (260)
T ss_pred hHHHhcceEEEecCCc--cC-cCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHH
Confidence 24778888753 22 25777765421 111122356788999999842 223456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||++||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|+++. .|+.+++.
T Consensus 166 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 243 (260)
T PRK10744 166 CIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIE-FGNTDTIF 243 (260)
T ss_pred HHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999999876 3589999999999999999999999999974 67776654
No 312
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=6.3e-39 Score=339.74 Aligned_cols=189 Identities=21% Similarity=0.307 Sum_probs=162.1
Q ss_pred eEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------eeEEeeccchhcccCC
Q psy10512 415 WIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------------LRFARYHQHLHELLDL 479 (629)
Q Consensus 415 ~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------------~~~~~~~q~~~~~~~~ 479 (629)
.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|. ..++|++|... +..
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~--l~~ 84 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA--LFP 84 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc--CCC
Confidence 4899999999999999999999999999999999999999999998772 35889998753 455
Q ss_pred CCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHH
Q psy10512 480 DISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDME 554 (629)
Q Consensus 480 ~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~ 554 (629)
..|+.+++... .......+++.++++.+||... .++++.+|||||||||+|||||+.+|+||||||||++||+.
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~ 163 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-EHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPL 163 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 67888876432 1122234678899999999764 45677999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 555 TIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 555 ~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++..
T Consensus 164 ~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv-~~g~~~ei~~ 219 (363)
T TIGR01186 164 IRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIV-QVGTPDEILR 219 (363)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE-eeCCHHHHHh
Confidence 999999998754 579999999999999999999999999997 4687776543
No 313
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-39 Score=325.88 Aligned_cols=218 Identities=24% Similarity=0.326 Sum_probs=162.4
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC---CCCCceEEEeecccCCCCCcchhh
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV---PVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~---p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
+.|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|++. |++|+|.+.+. ++......
T Consensus 1 ~~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~--~i~~~~~~--- 75 (246)
T PRK14269 1 MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGK--DVKNQDVV--- 75 (246)
T ss_pred CceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCE--ecccCCHH---
Confidence 35899999999998899999999999999999999999999999999999974 57888876543 22111000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc--ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI--SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
..+..+..+.++...+ +.+..++ .......... .......++.++++.+|+.. +..++.+.+|||||
T Consensus 76 ------~~~~~i~~~~q~~~l~-~~tv~en-i~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~ 147 (246)
T PRK14269 76 ------ALRKNVGMVFQQPNVF-VKSIYEN-ISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQ 147 (246)
T ss_pred ------HHhhhEEEEecCCccc-cccHHHH-hhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHH
Confidence 0011111111111111 1222222 2211111111 11234456788999999953 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.+.+
T Consensus 148 ~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 227 (246)
T PRK14269 148 QQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKE 227 (246)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998764 6899999999999999999999999999998766554
Q ss_pred H
Q psy10512 316 A 316 (629)
Q Consensus 316 ~ 316 (629)
.
T Consensus 228 ~ 228 (246)
T PRK14269 228 F 228 (246)
T ss_pred H
Confidence 3
No 314
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=326.20 Aligned_cols=205 Identities=20% Similarity=0.250 Sum_probs=168.3
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc-------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH------- 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~------- 463 (629)
..++|+++||++.|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3458999999999963 3489999999999999999999999999999999999975 8999998762
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhhcC-------CChhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHH
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQSF-------PEVKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKC 527 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkq 527 (629)
..++|++|... +.. .++.+++.... ......+.+.++++.+|+... ...+++.+|||||||
T Consensus 94 ~~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 170 (267)
T PRK14235 94 DVVELRARVGMVFQKPN--PFP-KSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQ 170 (267)
T ss_pred chHHHhhceEEEecCCC--CCC-CcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHH
Confidence 23678888753 222 37777664211 111224557889999999531 234567999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 528 RVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 528 rv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++
T Consensus 171 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 249 (267)
T PRK14235 171 RLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLV-EVGDTEKM 249 (267)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEE-EeCCHHHH
Confidence 999999999999999999999999999999999999876 368999999999999999999999999997 46776665
Q ss_pred H
Q psy10512 606 K 606 (629)
Q Consensus 606 ~ 606 (629)
.
T Consensus 250 ~ 250 (267)
T PRK14235 250 F 250 (267)
T ss_pred H
Confidence 3
No 315
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-39 Score=331.14 Aligned_cols=216 Identities=24% Similarity=0.308 Sum_probs=160.3
Q ss_pred EEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhch
Q psy10512 89 KIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVD 168 (629)
Q Consensus 89 ~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~ 168 (629)
.++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +...+...+...
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~--~~~~~~~~~~~~---- 99 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQD--IAAMSRKELREL---- 99 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEE--ccccChhhhhhh----
Confidence 56799999999999999999999999999999999999999999999999999998875432 111000000000
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHc
Q psy10512 169 EERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALY 248 (629)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~ 248 (629)
.+..+..+.+....++.. +..++.................++.++++.+|+. +..++++.+|||||||||+|||||+
T Consensus 100 -~~~~i~~v~q~~~~~~~~-tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~Gq~qrv~lAral~ 176 (269)
T cd03294 100 -RRKKISMVFQSFALLPHR-TVLENVAFGLEVQGVPRAEREERAAEALELVGLE-GWEHKYPDELSGGMQQRVGLARALA 176 (269)
T ss_pred -hcCcEEEEecCcccCCCC-cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCCcccCCHHHHHHHHHHHHHh
Confidence 000000011111111111 2222222211111222333456788899999996 5678999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 249 VKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 249 ~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++..+..
T Consensus 177 ~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~ 245 (269)
T cd03294 177 VDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTP 245 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999988654 57999999999999999999999999999876543
No 316
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=330.40 Aligned_cols=217 Identities=18% Similarity=0.226 Sum_probs=158.4
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcch
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
.+|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+.. |++|++.+.+.. +.......
T Consensus 20 ~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~--i~~~~~~~ 97 (268)
T PRK14248 20 HILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLN--ILDSNINV 97 (268)
T ss_pred ceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEE--cccccccH
Confidence 35999999999998889999999999999999999999999999999999864 578888765432 11000000
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
...+..+.++.++...+ +.+..+++ ......... ........+.++++.+++.. ...++++.+||||
T Consensus 98 -------~~~~~~i~~v~q~~~~~-~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG 168 (268)
T PRK14248 98 -------VNLRREIGMVFQKPNPF-PKSIYNNI-THALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGG 168 (268)
T ss_pred -------HHHhccEEEEecCCccC-cccHHHHH-HHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHH
Confidence 00000011111111111 11222222 111111111 11223455777888888842 3567889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||||++|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|++++++..
T Consensus 169 q~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 247 (268)
T PRK14248 169 QQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQT 247 (268)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999876 47999999999999999999999999999987544
No 317
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=326.37 Aligned_cols=204 Identities=21% Similarity=0.252 Sum_probs=166.7
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~-------- 463 (629)
.++|+++|+++.|++ . .+|+++||+|.+|++++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 19 ~~~l~~~~l~~~~~~-~-~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 19 EHILEVKDLSIYYGE-K-RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred CceEEEEEEEEEeCC-c-eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 468999999999963 3 48999999999999999999999999999999999865 79999988752
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhcC--CC----hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQSF--PE----VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +.. .++.+++.... .. ....+.+..++..+++.. ....+++.+|||||+|||
T Consensus 97 ~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 97 VVNLRREIGMVFQKPN--PFP-KSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHHHhccEEEEecCCc--cCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHH
Confidence 24778888753 222 37777654221 11 112345677888888842 123457899999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ +.|+.+++.
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~ 251 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLV-EYDQTEQIF 251 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999999999999999999877 468999999999999999999999999997 467766653
No 318
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-39 Score=293.64 Aligned_cols=194 Identities=29% Similarity=0.398 Sum_probs=165.9
Q ss_pred eEEEEEEEEEEcCC--CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDD--GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~--~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+|+++++++..+.. ...||++|+|.|++||.++||||+||||||||-+++|+..|++|+|++.|+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 78999999887542 235899999999999999999999999999999999999999999998663
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..+++++|.+. +.++++.++++.... ........++.+|+++||..... +++.+|||||||||+||||++
T Consensus 86 R~~~vGfVFQSF~--Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~-HyP~qLSGGEQQRVAiARAfa 162 (228)
T COG4181 86 RARHVGFVFQSFH--LIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLT-HYPAQLSGGEQQRVALARAFA 162 (228)
T ss_pred hccceeEEEEeee--ccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccc-cCccccCchHHHHHHHHHHhc
Confidence 35899999864 456778887764211 12234567899999999987665 466999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
..|+||+.||||.+||.++-+.+.+++-.+ +.|+|+||||..++.+ |+|++.|..|+++
T Consensus 163 ~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l~ 225 (228)
T COG4181 163 GRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRLV 225 (228)
T ss_pred CCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeecceec
Confidence 999999999999999999999999988554 5689999999999966 9999999999986
No 319
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.2e-38 Score=338.95 Aligned_cols=189 Identities=24% Similarity=0.275 Sum_probs=161.8
Q ss_pred CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------------eeEEeeccchh
Q psy10512 414 PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------------------LRFARYHQHLH 474 (629)
Q Consensus 414 ~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------------------~~~~~~~q~~~ 474 (629)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+++. ..++|++|+..
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999762 24889998763
Q ss_pred cccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q psy10512 475 ELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~ 549 (629)
+....|+.+++... .+.....+.+.++++.+||.+.. ++++.+|||||||||+|||||+.+|+||||||||+
T Consensus 117 --l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts 193 (382)
T TIGR03415 117 --LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-DKKPGELSGGMQQRVGLARAFAMDADILLMDEPFS 193 (382)
T ss_pred --CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 44457888876532 12223345778999999997654 55779999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 550 HLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 550 ~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++|+++. .|+++++.
T Consensus 194 ~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~-~g~~~ei~ 253 (382)
T TIGR03415 194 ALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQ-HGTPEEIV 253 (382)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999988764 5799999999999999999999999999974 68877664
No 320
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=326.96 Aligned_cols=207 Identities=23% Similarity=0.319 Sum_probs=168.8
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
+++|+++|+++.|++....+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 5 NSIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred CceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 4689999999999643234899999999999999999999999999999999999999999999873 14
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|..... ....++.+++... .......+.+..+++.+|+.+.. +.++.+|||||+|||+|||||+.+|+
T Consensus 85 i~~v~q~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~ 162 (269)
T PRK13648 85 IGIVFQNPDNQ-FVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-DYEPNALSGGQKQRVAIAGVLALNPS 162 (269)
T ss_pred eeEEEeChHHh-cccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-hCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 78888875312 2334555443221 11112234677899999997544 45779999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||+|++|++|+++ ..|+++++.+
T Consensus 163 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~-~~g~~~~~~~ 231 (269)
T PRK13648 163 VIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVY-KEGTPTEIFD 231 (269)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEE-EecCHHHHhc
Confidence 99999999999999999999998765 4689999999999975 9999999999997 4687776543
No 321
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.6e-39 Score=336.96 Aligned_cols=221 Identities=22% Similarity=0.357 Sum_probs=161.2
Q ss_pred eEEEEeEEEEeC----CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CCceEEEeecccCCCCCcc
Q psy10512 87 DVKIANFSITFH----GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV---PDHIDIFHLTREMPASDKS 159 (629)
Q Consensus 87 ~i~i~nls~~y~----~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~---~g~i~i~~~~~~~~~~~~~ 159 (629)
.|+++||++.|+ ...+|+||||+|++||++||+|+||||||||+++|+|++.|. +|+|.+.+. ++......
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~--~i~~~~~~ 89 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGR--EILNLPEK 89 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCE--ECCcCCHH
Confidence 699999999995 357999999999999999999999999999999999999885 788776542 22111100
Q ss_pred hhhhhhhchHHH-HHHHHHHHHHh-ccCC-hhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc--hhhhcccCCCC
Q psy10512 160 ALTCVMEVDEER-VRLEKLAEQLV-ACED-DESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK--EMQQKKTKDFS 234 (629)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~--~~~~~~~~~LS 234 (629)
.+. ..+ ..+..++++.. .+.+ ....+++.............+...++.++|+.+||.. ...++++.+||
T Consensus 90 ~~~------~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LS 163 (330)
T PRK09473 90 ELN------KLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFS 163 (330)
T ss_pred HHH------HHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCC
Confidence 000 000 00111111110 1111 1122222211111112334455678899999999964 23577899999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 235 GGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||+|||+|||||+.+|+|||+||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+|++.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999887654 68999999999999999999999999999987
Q ss_pred cCcHH
Q psy10512 311 GGNYE 315 (629)
Q Consensus 311 ~g~~~ 315 (629)
+...+
T Consensus 244 g~~~~ 248 (330)
T PRK09473 244 GNARD 248 (330)
T ss_pred CCHHH
Confidence 65433
No 322
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=324.87 Aligned_cols=212 Identities=18% Similarity=0.216 Sum_probs=157.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~--~~~~~~~~------ 76 (237)
T PRK11614 5 MLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKD--ITDWQTAK------ 76 (237)
T ss_pred EEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEe--cCCCCHHH------
Confidence 5999999999998889999999999999999999999999999999999999999998875432 11110000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhC-CCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGL-GFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~l-gl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
..+..+..+.+....+ +..+..++....... .........+.++++.+ ++. +..++++.+|||||||||+|||
T Consensus 77 --~~~~~i~~~~q~~~~~-~~~tv~~~l~~~~~~--~~~~~~~~~~~~~l~~~~~l~-~~~~~~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 77 --IMREAVAIVPEGRRVF-SRMTVEENLAMGGFF--AERDQFQERIKWVYELFPRLH-ERRIQRAGTMSGGEQQMLAIGR 150 (237)
T ss_pred --HHHhCEEEeccCcccC-CCCcHHHHHHHhhhc--cChhHHHHHHHHHHHHHHHHH-HHHhCchhhCCHHHHHHHHHHH
Confidence 0000011111111111 111222222211110 11122344566777777 464 4567889999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+.+|+||||||||++||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++..+.
T Consensus 151 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 220 (237)
T PRK11614 151 ALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDT 220 (237)
T ss_pred HHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCC
Confidence 999999999999999999999999999888654 6899999999999999999999999999987653
No 323
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=326.56 Aligned_cols=223 Identities=23% Similarity=0.348 Sum_probs=162.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCC---CceEEEeecccCCCCCcchhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVP---DHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~---g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
+|+++||++.|+++.+|+|+||+|.+|++++|+||||||||||+++|+|++.|++ |++.+.+. .+........
T Consensus 4 ~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~--~~~~~~~~~~-- 79 (262)
T PRK09984 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGR--TVQREGRLAR-- 79 (262)
T ss_pred EEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCE--ecccccccch--
Confidence 5999999999999999999999999999999999999999999999999998874 77766542 2111000000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhh---h----hccChhhHHHHHHHHHHhCCCCchhhhcccCCCChH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDR---L----DDISADTAEARAANILHGLGFTKEMQQKKTKDFSGG 236 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l----~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGG 236 (629)
.....+..+..+.+....++..+..+++...... + ..........++.++++.+|+. +..++.+.+||||
T Consensus 80 --~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G 156 (262)
T PRK09984 80 --DIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMV-HFAHQRVSTLSGG 156 (262)
T ss_pred --hHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCH-HHHhCCccccCHH
Confidence 0000011111111111111111222222111000 0 0011123456788999999996 5678999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++++. |
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~-g 235 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYD-G 235 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe-C
Confidence 999999999999999999999999999999999999988764 57999999999999999999999999999765 4
Q ss_pred cHHHH
Q psy10512 313 NYEAF 317 (629)
Q Consensus 313 ~~~~~ 317 (629)
+++++
T Consensus 236 ~~~~~ 240 (262)
T PRK09984 236 SSQQF 240 (262)
T ss_pred CHHHh
Confidence 55544
No 324
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-39 Score=330.99 Aligned_cols=212 Identities=20% Similarity=0.290 Sum_probs=160.3
Q ss_pred eEEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
+|+++||++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+.+|++|++.+.+.. +.......
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~--i~~~~~~~---- 78 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMV--LSEETVWD---- 78 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEE--CCcCcHHH----
Confidence 5999999999974 569999999999999999999999999999999999999999999876532 11110000
Q ss_pred hhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
.+..+.++.+... .+...+..+++ ............+...++.++++.+||. ...++++.+|||||||||+|
T Consensus 79 -----~~~~i~~~~q~~~~~~~~~tv~enl-~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~qrv~l 151 (279)
T PRK13635 79 -----VRRQVGMVFQNPDNQFVGATVQDDV-AFGLENIGVPREEMVERVDQALRQVGME-DFLNREPHRLSGGQKQRVAI 151 (279)
T ss_pred -----HhhheEEEEeCHHHhcccccHHHHH-hhhHhhCCCCHHHHHHHHHHHHHHcCCh-hhhhCCcccCCHHHHHHHHH
Confidence 0000111111110 11111222222 2111111223334456789999999997 57889999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++. .||+|++|++|++++.+.
T Consensus 152 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~ 223 (279)
T PRK13635 152 AGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAA-QADRVIVMNKGEILEEGT 223 (279)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-cCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999988754 579999999999997 599999999999987654
No 325
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7.7e-39 Score=326.15 Aligned_cols=221 Identities=19% Similarity=0.270 Sum_probs=159.7
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeeccc---CCCCCcchhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTRE---MPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~---~~~~~~~~~~~ 163 (629)
+|+++|+++.|++..+|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+.+.... +..........
T Consensus 3 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (253)
T TIGR02323 3 LLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAERRR 82 (253)
T ss_pred eEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHHHH
Confidence 599999999999888999999999999999999999999999999999999999999988643200 11000000000
Q ss_pred hhhchHHHHHHHHHHHHHh--ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLV--ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI 241 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv 241 (629)
..+..+....+... ........+++..................+.++++.+|+.....++.+.+|||||||||
T Consensus 83 -----~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv 157 (253)
T TIGR02323 83 -----LMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRL 157 (253)
T ss_pred -----hhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHH
Confidence 00000000000000 00000111111110000110111123467889999999964567889999999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 242 ALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 242 ~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
+|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 158 ~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 158 QIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999887653 6899999999999999999999999999987654
No 326
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.6e-39 Score=323.08 Aligned_cols=211 Identities=20% Similarity=0.262 Sum_probs=156.2
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++||++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~------- 71 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGED--ITKLPPHE------- 71 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEE--CCCCCHHH-------
Confidence 578999999998899999999999999999999999999999999999999999999875432 11100000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..+..+..+.+....+ +..+..++.......... .....+.++++.+++-....++++.+|||||+||++|||||
T Consensus 72 -~~~~~i~~~~q~~~~~-~~~tv~~~l~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al 146 (230)
T TIGR03410 72 -RARAGIAYVPQGREIF-PRLTVEENLLTGLAALPR---RSRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARAL 146 (230)
T ss_pred -HHHhCeEEeccCCccc-CCCcHHHHHHHHHHhcCc---chHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHH
Confidence 0000111111111111 121222222211111111 12234566777776323567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 147 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~ 215 (230)
T TIGR03410 147 VTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGA 215 (230)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999988764 6799999999999999999999999999987643
No 327
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-39 Score=310.54 Aligned_cols=209 Identities=22% Similarity=0.338 Sum_probs=174.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
.+++++|+++||++.+++|+||++++|+++|++|||||||||.+|+|.|++.|++|+|.+.+.. +...
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~--~~~~---------- 69 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGP--LSQE---------- 69 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcc--hhhh----------
Confidence 5899999999999999999999999999999999999999999999999999999999886422 1111
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
...+++++.++-... +..+..+....+.++.+++..++..++..+|+++++. ....+++.+||-|.+|++.+..+
T Consensus 70 ---~~~rIGyLPEERGLy-~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~-~~~~~kIk~LSKGnqQKIQfisa 144 (300)
T COG4152 70 ---IKNRIGYLPEERGLY-PKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIV-GKKTKKIKELSKGNQQKIQFISA 144 (300)
T ss_pred ---hhhhcccChhhhccC-ccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcccc-ccccchHHHhhhhhhHHHHHHHH
Confidence 011122221111122 2233444444567788888889999999999999997 46788999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHh---hcCCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELK---TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~---~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
++++|++||||||+|||||.+.+.|.+.+. +.|.|||++||.|+.+..+||+++.|++|+.+.+|.
T Consensus 145 viHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~ 213 (300)
T COG4152 145 VIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGT 213 (300)
T ss_pred HhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEecc
Confidence 999999999999999999999999998764 458999999999999999999999999999998764
No 328
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.6e-38 Score=354.83 Aligned_cols=205 Identities=25% Similarity=0.391 Sum_probs=175.6
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------e
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------L 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~ 464 (629)
.++|+++|+++.|++ ..+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. .
T Consensus 9 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 9 PPLLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred CceEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 458999999999963 34899999999999999999999999999999999999999999998763 2
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcCC-ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSFP-EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
.++|++|... +....++.+++..... .....+++.++++.+|+.... ++++.+|||||||||+|||||+.+|++||
T Consensus 87 ~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~aL~~~p~lll 163 (510)
T PRK15439 87 GIYLVPQEPL--LFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-DSSAGSLEVADRQIVEILRGLMRDSRILI 163 (510)
T ss_pred CEEEEeccCc--cCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-cCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 4789988753 4456788887654322 112346688899999997544 56789999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||+|||+.++..+.+.|.++ +.+||+||||++++..+||+|++|++|+++ +.|+++++..
T Consensus 164 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 229 (510)
T PRK15439 164 LDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIA-LSGKTADLST 229 (510)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecChHHcCH
Confidence 99999999999999999998775 568999999999999999999999999997 5788877643
No 329
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.3e-39 Score=326.40 Aligned_cols=203 Identities=24% Similarity=0.312 Sum_probs=151.2
Q ss_pred EEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchHHHHHH
Q psy10512 95 ITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRL 174 (629)
Q Consensus 95 ~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (629)
+.|+.+++|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+... ...... .+..+
T Consensus 29 ~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~--~~~~~~----------~~~~i 96 (236)
T cd03267 29 RKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVP--WKRRKK----------FLRRI 96 (236)
T ss_pred cccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEc--cccchh----------hcccE
Confidence 456667899999999999999999999999999999999999999999998754321 000000 00000
Q ss_pred HHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHccCCCEE
Q psy10512 175 EKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLL 254 (629)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~iL 254 (629)
....++.....+..+..++......+..........++..+++.+|+. +..++++.+||||||||++|||||+.+|+||
T Consensus 97 ~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 175 (236)
T cd03267 97 GVVFGQKTQLWWDLPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLE-ELLDTPVRQLSLGQRMRAEIAAALLHEPEIL 175 (236)
T ss_pred EEEcCCccccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 000000000111112222222222222223334455678899999996 5678899999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 255 LLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 255 LLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++++.
T Consensus 176 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 235 (236)
T cd03267 176 FLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYD 235 (236)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEec
Confidence 999999999999999999998765 57999999999999999999999999998754
No 330
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=328.06 Aligned_cols=206 Identities=23% Similarity=0.333 Sum_probs=170.2
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCc---cEEEECCc----------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSV---GMVRKNSH---------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~---G~i~~~~~---------- 463 (629)
.++|+++|+++.|++....+|+++||+|.+||+++|+||||||||||+++|+|+++|++ |+|.+++.
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 35799999999996432348999999999999999999999999999999999999998 89988763
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhcC--C---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQSF--P---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
..++|++|.+.. .....++.+++.... . .....+++.++++.+||.... ++++.+|||||+|||+|||||+.
T Consensus 83 ~~~ig~v~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LS~G~~qrv~laral~~ 160 (282)
T PRK13640 83 REKVGIVFQNPDN-QFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-DSEPANLSGGQKQRVAIAGILAV 160 (282)
T ss_pred HhheEEEEECHHH-hhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-cCCcccCCHHHHHHHHHHHHHHc
Confidence 247888887532 223567887764221 1 112235678899999997644 56779999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++. +||++++|++|+++. .|+++++.
T Consensus 161 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~ 231 (282)
T PRK13640 161 EPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA-QGSPVEIF 231 (282)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHh
Confidence 99999999999999999999999998765 468999999999995 799999999999974 67776653
No 331
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-39 Score=325.93 Aligned_cols=215 Identities=16% Similarity=0.214 Sum_probs=158.9
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|++++|++..+|+|+||+|++||+++|+||||||||||+++|+|++.|. +|+|.+.+.. +.......
T Consensus 7 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~--i~~~~~~~- 83 (254)
T PRK14273 7 IIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKN--IYSNNFDI- 83 (254)
T ss_pred eEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEe--cccccccH-
Confidence 699999999999888999999999999999999999999999999999999874 7887765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc-cChhhHHHHHHHHHHhCCCC---chhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD-ISADTAEARAANILHGLGFT---KEMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGq 237 (629)
...+..+..+.++...+ ..+..+++ ........ ........++.++++.+|+. .+..++++.+|||||
T Consensus 84 ------~~~~~~i~~v~q~~~~~-~~tv~eni-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 84 ------LELRRKIGMVFQTPNPF-LMSIYDNI-SYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQ 155 (254)
T ss_pred ------HHHhhceEEEeeccccc-cCcHHHHH-HHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHH
Confidence 00000011111111111 11222222 21111111 12223456778889998873 235688899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..+.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 232 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESS 232 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999998776 4799999999999999999999999999987654
No 332
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=298.92 Aligned_cols=203 Identities=24% Similarity=0.404 Sum_probs=172.1
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc--------------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-------------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-------------- 463 (629)
+.|+++|+.++|+. ..+|++|||+...|++|.|||.+|||||||||||.=+..|+.|.|.+++.
T Consensus 5 ~~l~v~dlHK~~G~--~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 5 NALEVEDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred cceehhHHHhhccc--chhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 46899999999964 34899999999999999999999999999999999999999999988762
Q ss_pred ----------eeEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHH
Q psy10512 464 ----------LRFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKC 527 (629)
Q Consensus 464 ----------~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkq 527 (629)
.+.+.++|++. +...+|+++++.. +.+.....+++..+|.++|+.+... .++..|||||+|
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FN--LWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~-~YP~~LSGGQQQ 159 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFN--LWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKAD-AYPAHLSGGQQQ 159 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcc--hhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhh-cCccccCchHHH
Confidence 12455666653 3344677776643 2334455678899999999987655 566899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 528 RVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 528 rv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
|++|||||+.+|+++|+|||||+|||+-..+++..++++ +.|+++|||.+.|+..++++|+++++|.|. ..|++++
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iE-E~G~P~q 238 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIE-EEGPPEQ 238 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceec-ccCChHH
Confidence 999999999999999999999999999999998888776 679999999999999999999999999995 5888876
Q ss_pred HH
Q psy10512 605 YK 606 (629)
Q Consensus 605 ~~ 606 (629)
..
T Consensus 239 vf 240 (256)
T COG4598 239 VF 240 (256)
T ss_pred Hh
Confidence 53
No 333
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=327.06 Aligned_cols=216 Identities=22% Similarity=0.273 Sum_probs=160.3
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++| +.|+|.+.+.. +.......
T Consensus 19 ~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~--i~~~~~~~- 95 (267)
T PRK14235 19 KMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGED--IYDPRLDV- 95 (267)
T ss_pred eEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEE--Ccccccch-
Confidence 69999999999988999999999999999999999999999999999999874 78888765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc--ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI--SADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
...+..+..+.+....+ +. +..++..+....... .......++.++++.+|+.. ...++++.+||||
T Consensus 96 ------~~~~~~i~~v~q~~~~~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG 167 (267)
T PRK14235 96 ------VELRARVGMVFQKPNPF-PK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGG 167 (267)
T ss_pred ------HHHhhceEEEecCCCCC-CC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHH
Confidence 00000111111111111 12 222222221111111 12234566788999999953 2457889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..+..
T Consensus 168 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 168 QQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998765 47999999999999999999999999999877543
No 334
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=319.98 Aligned_cols=211 Identities=26% Similarity=0.360 Sum_probs=160.8
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|..|++.+.+.. +......
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~--~~~~~~~-------- 70 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKD--ITNLPPH-------- 70 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--cCcCChh--------
Confidence 468999999998899999999999999999999999999999999999999999998875432 1110000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
+..+....+....+...+..+++ ................++..+++.+|+. +..++.+.+|||||+|||+|||||
T Consensus 71 ---~~~i~~~~q~~~~~~~~t~~~nl-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~laral 145 (232)
T cd03300 71 ---KRPVNTVFQNYALFPHLTVFENI-AFGLRLKKLPKAEIKERVAEALDLVQLE-GYANRKPSQLSGGQQQRVAIARAL 145 (232)
T ss_pred ---hcceEEEecccccCCCCcHHHHH-HHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHH
Confidence 00000001111111111222222 1111111122333456778899999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+.+|++|||||||++||+.++.++.+.|.++ +.|||++||+++++..+||++++|++|++...+..
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~ 215 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTP 215 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 9999999999999999999999999988654 67999999999999999999999999999877644
No 335
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=325.10 Aligned_cols=217 Identities=23% Similarity=0.301 Sum_probs=160.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++||+++|+++++|+|+||+|.+||+++|+||||||||||+++|+|+++|. +|+|.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~--i~~~~~~~- 80 (253)
T PRK14267 4 AIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRN--IYSPDVDP- 80 (253)
T ss_pred eEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEE--ccccccCh-
Confidence 589999999999888999999999999999999999999999999999999874 7888775432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc--ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI--SADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
...+..+..+.++...++..+..+++ ......... .......++.++++.+|+.. ...++++.+||||
T Consensus 81 ------~~~~~~i~~~~q~~~~~~~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 ------IEVRREVGMVFQYPNPFPHLTIYDNV-AIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGG 153 (253)
T ss_pred ------HHHhhceeEEecCCccCCCCcHHHHH-HHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHH
Confidence 00000111111111111111222222 211111111 22234456788999999842 3467889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++..+.+
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999998765 47999999999999999999999999999977543
No 336
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.2e-38 Score=317.83 Aligned_cols=193 Identities=27% Similarity=0.409 Sum_probs=159.8
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|+.....+|+|+||+|.+|++++|+||||||||||+++|+|+.+|++|+|.+++. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 7899999999643234899999999999999999999999999999999999999999998873 24788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCccccc----------CcCcCChhHHHHHHHHHHHccC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVC----------PIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~~ 538 (629)
++|... .+ ..++.+++...... .....+.++++.+++.+..... ++.+|||||||||+||||++.+
T Consensus 83 ~~q~~~-~~--~~tv~e~l~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~ 158 (220)
T cd03245 83 VPQDVT-LF--YGTLRDNITLGAPL-ADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLND 158 (220)
T ss_pred eCCCCc-cc--cchHHHHhhcCCCC-CCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 888753 22 24777776432221 2344567788888886433221 2469999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|++|||||||+|||+.++..+.+.|.++. .|||+||||++++ .+||++++|++|+++.
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~ 218 (220)
T cd03245 159 PPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVA 218 (220)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEee
Confidence 99999999999999999999999998873 5899999999987 6999999999999863
No 337
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-39 Score=325.42 Aligned_cols=219 Identities=19% Similarity=0.299 Sum_probs=159.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--C---CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV--P---VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~--p---~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|++. | ++|++.+.+. .+........
T Consensus 4 ~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~--~i~~~~~~~~ 81 (252)
T PRK14256 4 KVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDT--DIYDRGVDPV 81 (252)
T ss_pred EEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCE--EcccccCChH
Confidence 4899999999998889999999999999999999999999999999999985 3 4688776543 2211000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK---EMQQKKTKDFSGGWR 238 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGqr 238 (629)
..+..+..+.++...+...+..+++...+.............++.++++.+|+.. +..++.+.+|||||+
T Consensus 82 -------~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 82 -------SIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQ 154 (252)
T ss_pred -------HhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHH
Confidence 0000000111111111111222222111111111122334456788999999853 345678999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
|||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..+...
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999998776 579999999999999999999999999999876543
No 338
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.8e-38 Score=315.14 Aligned_cols=191 Identities=25% Similarity=0.395 Sum_probs=162.2
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
++++||++.|+. ++.++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 76 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLF 76 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEe
Confidence 468999999952 468999999999999999999999999999999999999999998764 2478888
Q ss_pred cchhcccCCCCCHHHHHhhcC-C----ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQSF-P----EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|... +....++.+++.... . ......++.++++.+|+.... ++++.+|||||+|||+|||||+.+|++||||
T Consensus 77 q~~~--~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllD 153 (213)
T TIGR01277 77 QENN--LFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYL-DRLPEQLSGGQRQRVALARCLVRPNPILLLD 153 (213)
T ss_pred ccCc--cCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8753 344568877764321 1 112345678899999997543 5677999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||++||+.++..+.+.|.++ +.|||+||||.+++..+||++++|++|+++.
T Consensus 154 EPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 154 EPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 999999999999999998765 4689999999999999999999999999974
No 339
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=324.99 Aligned_cols=214 Identities=23% Similarity=0.295 Sum_probs=159.7
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|++.| ++|+|.+.+.. +......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~--i~~~~~~-- 78 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQD--IFKMDVI-- 78 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEE--CCcCCHH--
Confidence 48999999999988999999999999999999999999999999999999874 57877765432 1110000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc--ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI--SADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
..+..+..+.+....++. .+..++..+....... ......+.+.++++.+|+.. ...++++.+||||
T Consensus 79 -------~~~~~i~~v~q~~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG 150 (250)
T PRK14247 79 -------ELRRRVQMVFQIPNPIPN-LSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGG 150 (250)
T ss_pred -------HHhccEEEEeccCccCCC-CcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHH
Confidence 000011111111111111 2222222211111111 22334567888999999853 3468889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|+|+||||++++..+||++++|++|+++..+.
T Consensus 151 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 228 (250)
T PRK14247 151 QQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGP 228 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECC
Confidence 999999999999999999999999999999999999998765 5799999999999999999999999999987654
No 340
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=323.27 Aligned_cols=203 Identities=22% Similarity=0.259 Sum_probs=167.0
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH---------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~---------- 463 (629)
+|+++|++++|++ . .+|+++||+|++|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 4 ~l~i~~v~~~~~~-~-~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS-F-HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC-E-eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 6899999999963 3 489999999999999999999999999999999999974 7999998763
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|... +....++.+++.... ......+.+.++++.+|+.. ....+++.+|||||+|||+|
T Consensus 82 ~~~~~i~~~~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (258)
T PRK14241 82 AVRRTIGMVFQRPN--PFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCI 159 (258)
T ss_pred HHhcceEEEccccc--cCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 13778887643 334567777664211 11122346778899999842 23346789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEe------CCEEEEecCCHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICE------NGKVTKWEGNIL 603 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~------~G~i~~~~g~~~ 603 (629)
||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|+ +|+|+ +.|+.+
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~-~~~~~~ 238 (258)
T PRK14241 160 ARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLV-EIDDTE 238 (258)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEE-ecCCHH
Confidence 99999999999999999999999999999999876 4689999999999999999999997 79997 468776
Q ss_pred HHH
Q psy10512 604 DYK 606 (629)
Q Consensus 604 ~~~ 606 (629)
++.
T Consensus 239 ~~~ 241 (258)
T PRK14241 239 KIF 241 (258)
T ss_pred HHH
Confidence 653
No 341
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-39 Score=330.81 Aligned_cols=214 Identities=22% Similarity=0.279 Sum_probs=160.1
Q ss_pred eEEEEeEEEEeCC------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcch
Q psy10512 87 DVKIANFSITFHG------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 87 ~i~i~nls~~y~~------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
+|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|++.|+.|+|.+.+... ..... .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i--~~~~~-~ 80 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDT--SDEEN-L 80 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEec--ccccc-H
Confidence 5999999999963 4699999999999999999999999999999999999999999998764321 10000 0
Q ss_pred hhhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRM 239 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrq 239 (629)
. ..+..+..+.++.. .... .+..+...+..............++.++++.+|+. +..++++.+|||||||
T Consensus 81 ~-------~~~~~i~~v~q~~~~~~~~-~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LS~G~~q 151 (280)
T PRK13633 81 W-------DIRNKAGMVFQNPDNQIVA-TIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMY-EYRRHAPHLLSGGQKQ 151 (280)
T ss_pred H-------HHhhheEEEecChhhhhcc-ccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHH
Confidence 0 00000100111100 0001 11122211111111223344456788999999996 6788999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 240 RIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 240 Rv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||+|||||+.+|+||||||||++||+.++..|.+.|+++ +.|||+||||++++.. ||++++|++|+++..+.+
T Consensus 152 rv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~ 228 (280)
T PRK13633 152 RVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTP 228 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCH
Confidence 999999999999999999999999999999999988754 6799999999999986 999999999999876543
No 342
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=336.44 Aligned_cols=199 Identities=24% Similarity=0.298 Sum_probs=168.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH--------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------------- 463 (629)
||++ ||+++|++ . .+ ++||+|++||+++|+|||||||||||++|+|+++|++|+|.+++.
T Consensus 1 ~l~~-~l~k~~~~--~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 1 MLEL-NFKQQLGD--L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred CeEE-EEEEEeCC--E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 4778 99999953 2 23 899999999999999999999999999999999999999988652
Q ss_pred eeEEeeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 464 LRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 464 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
..++|++|... +....++.+++...... ...+++.++++.+|+.... ++++.+|||||||||+|||||+.+|++||
T Consensus 76 ~~i~~v~q~~~--l~~~~tv~enl~~~~~~-~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qRvalaraL~~~p~llL 151 (352)
T PRK11144 76 RRIGYVFQDAR--LFPHYKVRGNLRYGMAK-SMVAQFDKIVALLGIEPLL-DRYPGSLSGGEKQRVAIGRALLTAPELLL 151 (352)
T ss_pred CCEEEEcCCcc--cCCCCcHHHHHHhhhhh-hhHHHHHHHHHHcCCchhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 24778888753 44567888887543322 3356788999999997644 55779999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 544 LDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||++||+.++..+.+.|+++ +.|+|+||||++++..+||++++|++|+++ ..|+++++..
T Consensus 152 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~i~~ 218 (352)
T PRK11144 152 MDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVK-AFGPLEEVWA 218 (352)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEE-EecCHHHHHh
Confidence 99999999999999999988765 468999999999999999999999999997 4677766543
No 343
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=362.79 Aligned_cols=209 Identities=22% Similarity=0.318 Sum_probs=173.6
Q ss_pred CCeEEEEEEEEEEcCC--CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------
Q psy10512 397 PPVIMVQNVSFRYSDD--GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH----------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~--~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------- 463 (629)
+++|+++||++.|+.. ...+|+|+||+|.+||++||+||||||||||+++|+|+++|++|.|.+++.
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 5689999999999531 234899999999999999999999999999999999999999999987541
Q ss_pred --------------eeEEeeccchhcccCCCCCHHHHHhhc------CCChhhHHHHHHHHHHcCCCC--cccccCcCcC
Q psy10512 464 --------------LRFARYHQHLHELLDLDISPLDYMLQS------FPEVKDREEMRKIIGRYGLTG--RQQVCPIRQL 521 (629)
Q Consensus 464 --------------~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~gl~~--~~~~~~~~~L 521 (629)
..++|++|++...+....++.+++... .......+++.++|+.+||.. ...++++.+|
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~L 169 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQL 169 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccC
Confidence 147899987532344567887776431 112123457888999999963 2345678999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 522 SDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 522 SgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|+|+.
T Consensus 170 SgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~~ 249 (623)
T PRK10261 170 SGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVE 249 (623)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeecc
Confidence 999999999999999999999999999999999999999988764 5689999999999999999999999999974
Q ss_pred ecCCHHHHH
Q psy10512 598 WEGNILDYK 606 (629)
Q Consensus 598 ~~g~~~~~~ 606 (629)
.|++.++.
T Consensus 250 -~g~~~~~~ 257 (623)
T PRK10261 250 -TGSVEQIF 257 (623)
T ss_pred -cCCHHHhh
Confidence 78776653
No 344
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=323.70 Aligned_cols=217 Identities=19% Similarity=0.270 Sum_probs=158.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCC---CCC--CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNR---EVP--VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~---~~p--~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+ .+| +.|++.+.+.. +.......
T Consensus 3 ~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~--~~~~~~~~- 79 (250)
T PRK14245 3 KIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRN--IYDKGVQV- 79 (250)
T ss_pred EEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEe--cccccccH-
Confidence 69999999999988899999999999999999999999999999999996 344 36887765432 11100000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.++...+ +.+..+++ ......... ........+.++++.+|+.. ...++++.+|||||
T Consensus 80 ------~~~~~~i~~v~q~~~~~-~~tv~~nl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~ 151 (250)
T PRK14245 80 ------DELRKNVGMVFQRPNPF-PKSIFENV-AYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQ 151 (250)
T ss_pred ------HHHhhheEEEecCCccC-cccHHHHH-HHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHH
Confidence 00000111111111111 11222222 111111111 11224456788999999853 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|++++.+.+.
T Consensus 152 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~ 230 (250)
T PRK14245 152 QQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTK 230 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999765 479999999999999999999999999999876443
No 345
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.4e-38 Score=319.31 Aligned_cols=201 Identities=27% Similarity=0.397 Sum_probs=160.8
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|+.....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 4789999999643334899999999999999999999999999999999999999999999873 24788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHH---------HHHHHHc--CCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEM---------RKIIGRY--GLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~--gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
++|... + +..++.+++...... .....+ .+++..+ ++.... ..++.+|||||||||+|||||+.
T Consensus 81 ~~q~~~--~-~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-~~~~~~LSgG~~qrv~laral~~ 155 (237)
T cd03252 81 VLQENV--L-FNRSIRDNIALADPG-MSMERVIEAAKLAGAHDFISELPEGYDTIV-GEQGAGLSGGQRQRIAIARALIH 155 (237)
T ss_pred EcCCch--h-ccchHHHHhhccCCC-CCHHHHHHHHHHcCcHHHHHhCcccccchh-hcCCCcCCHHHHHHHHHHHHHhh
Confidence 888753 2 235777776432211 111222 2334444 443322 34679999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|++|||||||++||+.++..+.+.|.++ +.|||++|||++++. .||++++|++|+++ +.|+.+++..
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~-~~~~~~~~~~ 225 (237)
T cd03252 156 NPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIV-EQGSHDELLA 225 (237)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999999999999999999876 468999999999996 59999999999997 5677766543
No 346
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2e-38 Score=306.41 Aligned_cols=175 Identities=30% Similarity=0.468 Sum_probs=145.4
Q ss_pred EEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhch
Q psy10512 89 KIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVD 168 (629)
Q Consensus 89 ~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~ 168 (629)
+++|+++.|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|+.|++.+.+.. +..... .
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~--~~~~~~---------~ 69 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKD--LASLSP---------K 69 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE--CCcCCH---------H
Confidence 46899999998889999999999999999999999999999999999999999998875321 110000 0
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHc
Q psy10512 169 EERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALY 248 (629)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~ 248 (629)
..+..+.. +.++++.+|+. +..++.+.+|||||+||++|||||+
T Consensus 70 ~~~~~i~~-----------------------------------~~q~l~~~gl~-~~~~~~~~~LS~G~~qrl~laral~ 113 (180)
T cd03214 70 ELARKIAY-----------------------------------VPQALELLGLA-HLADRPFNELSGGERQRVLLARALA 113 (180)
T ss_pred HHHHHHhH-----------------------------------HHHHHHHcCCH-hHhcCCcccCCHHHHHHHHHHHHHh
Confidence 00000000 00177888986 5568889999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 249 VKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 249 ~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
.+|++|||||||++||+.++.++.+.|.++ +.|+|+|||+++++..+||++++|++|+++..
T Consensus 114 ~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~ 179 (180)
T cd03214 114 QEPPILLLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQ 179 (180)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999988765 57999999999999999999999999998753
No 347
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=323.82 Aligned_cols=217 Identities=21% Similarity=0.314 Sum_probs=159.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+..| ++|++.+.+.. +.......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~--~~~~~~~~- 79 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQD--IYKSDIDV- 79 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEE--ccccccch-
Confidence 48999999999988899999999999999999999999999999999998763 56877765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +.+..+++ ......... ......+++.++++.+++.. +..++++.+|||||
T Consensus 80 ------~~~~~~i~~~~q~~~~~-~~t~~~ni-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 80 ------NQLRKRVGMVFQQPNPF-PMSIYDNV-AYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQ 151 (250)
T ss_pred ------HHHhccEEEEecCCccC-cccHHHHH-HHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHH
Confidence 00000011111111111 11222222 211111111 12234567788889988742 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
+|||+|||||+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..+...
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 230 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTV 230 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999988765 579999999999999999999999999999876543
No 348
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=355.78 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=172.2
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------e
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------L 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~ 464 (629)
.++|+++|++++|++ ..+|+|+||+|++|+++||+||||||||||+|+|+|+++|++|+|.+++. .
T Consensus 3 ~~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 80 (510)
T PRK09700 3 TPYISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQL 80 (510)
T ss_pred CceEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHC
Confidence 368999999999963 34899999999999999999999999999999999999999999998762 2
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcC------CC------hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSF------PE------VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 532 (629)
.++|++|+.. +....++.+++.... .. ....+++.++++.+|+... .++++.+|||||||||+||
T Consensus 81 ~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 81 GIGIIYQELS--VIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-LDEKVANLSISHKQMLEIA 157 (510)
T ss_pred CeEEEeeccc--ccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-cccchhhCCHHHHHHHHHH
Confidence 4788888753 344567777764321 01 1123567889999999754 4568899999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+++++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~-~~g~~~~~ 232 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSV-CSGMVSDV 232 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEe-eecchhhC
Confidence 9999999999999999999999999999998775 468999999999999999999999999996 57877665
No 349
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=325.27 Aligned_cols=205 Identities=20% Similarity=0.288 Sum_probs=169.6
Q ss_pred CeEEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 398 PVIMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
++|+++||++.|+.. ...+|+++||+|.+||+++|+|+||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 3 KILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred ceEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcc
Confidence 379999999999632 234899999999999999999999999999999999999999999998763 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
++|++|.... .....++.+++... .......+.+..+++.+|+... ..+++.+|||||+|||+|||||+.+|+
T Consensus 83 i~~v~q~~~~-~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrv~lAraL~~~p~ 160 (277)
T PRK13642 83 IGMVFQNPDN-QFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDF-KTREPARLSGGQKQRVAVAGIIALRPE 160 (277)
T ss_pred eEEEEECHHH-hhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhH-hhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7888887532 22345777766421 1111223457889999999754 456789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||||++||+.++..+.+.|.++ +.|||+||||++++. .||+|++|++|+++ ..|+++++.
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~~~ 228 (277)
T PRK13642 161 IIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEII-KEAAPSELF 228 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999998765 568999999999997 59999999999997 467776654
No 350
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-38 Score=325.35 Aligned_cols=205 Identities=21% Similarity=0.246 Sum_probs=167.9
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc-------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH------- 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~------- 463 (629)
+.++|+++||++.|+. . .+|+|+||+|.+|++++|+||||||||||+++|+|+.+ |++|+|.+++.
T Consensus 36 ~~~~l~~~~l~~~~~~-~-~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~ 113 (286)
T PRK14275 36 GKPHVVAKNFSIYYGE-F-EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFT 113 (286)
T ss_pred CceEEEEeeeEEEECC-E-EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhccc
Confidence 5678999999999963 3 48999999999999999999999999999999999864 49999988762
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhhc-----CCC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHH
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQS-----FPE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCR 528 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqr 528 (629)
..++|++|+.. +.. .++.+++... ... ....+.+.++++.+|+.. ....+++.+|||||+||
T Consensus 114 ~~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qr 190 (286)
T PRK14275 114 DEVLLRKKIGMVFQKPN--PFP-KSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQR 190 (286)
T ss_pred chHHhhhcEEEECCCCC--CCc-cCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHH
Confidence 14778888753 222 3787776431 111 112345677888888742 22345779999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 529 VVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 529 v~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.+||+||||++++..+||++++|++|+++ ..|+..++.
T Consensus 191 v~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~-~~g~~~~~~ 269 (286)
T PRK14275 191 LCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLV-EHAPTAQLF 269 (286)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 99999999999999999999999999999999999887 358999999999999999999999999997 467776653
No 351
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=336.36 Aligned_cols=221 Identities=19% Similarity=0.228 Sum_probs=158.4
Q ss_pred eEEEEeEEEEe----CCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC----CCCCceEEEeecccCCCCCc
Q psy10512 87 DVKIANFSITF----HGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV----PVPDHIDIFHLTREMPASDK 158 (629)
Q Consensus 87 ~i~i~nls~~y----~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~----p~~g~i~i~~~~~~~~~~~~ 158 (629)
+|+++||+++| +...+|+||||+|.+||++||+|+||||||||+++|+|++. |+.|+|.+.+. ++.....
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~--~i~~~~~ 80 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI--DLLRLSP 80 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE--ECCcCCH
Confidence 58999999999 44679999999999999999999999999999999999986 46777766432 2211110
Q ss_pred chhhhhhhchHHHHHHHHHHHHHh-ccCC-hhHHHHHHHHHhhh--hc---cChhhHHHHHHHHHHhCCCCc--hhhhcc
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQLV-ACED-DESQEQLMDIYDRL--DD---ISADTAEARAANILHGLGFTK--EMQQKK 229 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l--~~---~~~~~~~~~~~~~L~~lgl~~--~~~~~~ 229 (629)
...... .+..+..+++... .+.+ .+..+++....... .. ........++.++|+.+||.. +..+++
T Consensus 81 ~~~~~~-----~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~ 155 (330)
T PRK15093 81 RERRKL-----VGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSF 155 (330)
T ss_pred HHHHHH-----hCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCC
Confidence 000000 0000001111100 0011 11111221110000 00 011234567889999999973 346889
Q ss_pred cCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCC
Q psy10512 230 TKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKR 305 (629)
Q Consensus 230 ~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G 305 (629)
+.+|||||+|||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999988753 689999999999999999999999999
Q ss_pred eEEEEcCcH
Q psy10512 306 KLKYYGGNY 314 (629)
Q Consensus 306 ~i~~~~g~~ 314 (629)
+|++.+...
T Consensus 236 ~ive~g~~~ 244 (330)
T PRK15093 236 QTVETAPSK 244 (330)
T ss_pred EEEEECCHH
Confidence 999876543
No 352
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2e-38 Score=317.43 Aligned_cols=198 Identities=25% Similarity=0.350 Sum_probs=162.4
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------ee
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LR 465 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ 465 (629)
+++|+++||++.|++ . .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 5 ~~~i~~~~l~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 5 SPLLQLQNVGYLAGD-A-KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred CceEEEeccEEeeCC-c-eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 458999999999963 3 4899999999999999999999999999999999999999999998863 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc---CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEE
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS---FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLL 542 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 542 (629)
++|++|... +. ..++.+++... .......+.+.++++.+|+......+++.+|||||+|||+|||||+.+|++|
T Consensus 83 i~~~~q~~~--l~-~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 159 (225)
T PRK10247 83 VSYCAQTPT--LF-GDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVL 159 (225)
T ss_pred cEEEecccc--cc-cccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 778888743 22 34777765421 1111234567789999999643345678999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEe--CCEEEEecCCH
Q psy10512 543 LLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICE--NGKVTKWEGNI 602 (629)
Q Consensus 543 lLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~--~G~i~~~~g~~ 602 (629)
||||||+|||+.+++.+.+.|.++ +.+||++|||++++. .||++++|+ .|+|. +|++
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~--~~~~ 222 (225)
T PRK10247 160 LLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQ--EARY 222 (225)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHh--hhhh
Confidence 999999999999999999988875 468999999999996 699999996 45542 4543
No 353
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-38 Score=317.68 Aligned_cols=201 Identities=26% Similarity=0.343 Sum_probs=168.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|.++|++++|+. . .+|+++||+|.+|++++|+||||||||||+++|+|+++|+.|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~-~-~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 78 (232)
T cd03300 1 IELENVSKFYGG-F-VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVF 78 (232)
T ss_pred CEEEeEEEEeCC-e-eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEe
Confidence 468999999963 3 4899999999999999999999999999999999999999999998763 3578888
Q ss_pred cchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|+.. +....++.+++.... ......+.+..+++.+|+.... ...+..|||||+|||+|||||+.+|++||||
T Consensus 79 q~~~--~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 79 QNYA--LFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYA-NRKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred cccc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8753 333457776654211 1112345677899999997554 4567899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|++.. .|+..++.
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~-~~~~~~~~ 219 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQ-IGTPEEIY 219 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEe-cCCHHHHH
Confidence 999999999999999998765 5699999999999999999999999999974 67765553
No 354
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=323.14 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=160.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--C---CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV--P---VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~--p---~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|++++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.. | ++|+|.+.+.. +.......
T Consensus 5 ~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~--~~~~~~~~- 81 (252)
T PRK14239 5 ILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHN--IYSPRTDT- 81 (252)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEE--CcCcccch-
Confidence 5899999999998889999999999999999999999999999999999853 5 47888765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccC-hhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDIS-ADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.++...+ +.+..+++ .......... .......+.++++.+++.. +..++.+.+|||||
T Consensus 82 ------~~~~~~i~~v~q~~~~~-~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~ 153 (252)
T PRK14239 82 ------VDLRKEIGMVFQQPNPF-PMSIYENV-VYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQ 153 (252)
T ss_pred ------HhhhhcEEEEecCCccC-cCcHHHHH-HHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHH
Confidence 00000011111111111 12222222 2111111111 1223456778899998742 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|++++++.+.+
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 154 QQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998765 4799999999999999999999999999998766544
Q ss_pred H
Q psy10512 316 A 316 (629)
Q Consensus 316 ~ 316 (629)
.
T Consensus 234 ~ 234 (252)
T PRK14239 234 M 234 (252)
T ss_pred H
Confidence 3
No 355
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-38 Score=321.44 Aligned_cols=206 Identities=21% Similarity=0.267 Sum_probs=168.5
Q ss_pred CCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC--C---CccEEEECCc------
Q psy10512 395 IPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT--P---SVGMVRKNSH------ 463 (629)
Q Consensus 395 ~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~--p---~~G~i~~~~~------ 463 (629)
+..++|+++|+++.|+. . .+|+++||+|++||+++|+||||||||||+++|+|+++ | ++|+|.+++.
T Consensus 8 ~~~~~l~i~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~ 85 (259)
T PRK14274 8 MKQEVYQINGMNLWYGQ-H-HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGK 85 (259)
T ss_pred cCCceEEEeeEEEEECC-e-eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccc
Confidence 34678999999999963 3 48999999999999999999999999999999999997 3 6899988753
Q ss_pred -------eeEEeeccchhcccCCCCCHHHHHhhc--CC---C-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHH
Q psy10512 464 -------LRFARYHQHLHELLDLDISPLDYMLQS--FP---E-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKC 527 (629)
Q Consensus 464 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkq 527 (629)
..++|++|... +.. .++.+++... .. . ....+++..+++.+++.. .....++.+|||||+|
T Consensus 86 ~~~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 86 VDLVELRKNIGMVFQKGN--PFP-QSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQ 162 (259)
T ss_pred cCHHHHhhceEEEecCCc--ccc-cCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHH
Confidence 13678888753 222 3777765321 11 1 112345677889999853 1234578899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 528 RVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 528 rv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
||+|||+|+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 241 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELV-ECNDTNKM 241 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 999999999999999999999999999999999999886 468999999999999999999999999997 46887776
Q ss_pred H
Q psy10512 606 K 606 (629)
Q Consensus 606 ~ 606 (629)
.
T Consensus 242 ~ 242 (259)
T PRK14274 242 F 242 (259)
T ss_pred h
Confidence 4
No 356
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=325.53 Aligned_cols=217 Identities=21% Similarity=0.240 Sum_probs=160.3
Q ss_pred ceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcc
Q psy10512 85 SRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKS 159 (629)
Q Consensus 85 ~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~ 159 (629)
+.+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++| ++|++.+.+.. +.....
T Consensus 19 ~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~--i~~~~~- 95 (276)
T PRK14271 19 APAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRS--IFNYRD- 95 (276)
T ss_pred CcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEE--ccccch-
Confidence 4479999999999999999999999999999999999999999999999999886 57877765422 110000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh-ccChhhHHHHHHHHHHhCCCCc---hhhhcccCCCCh
Q psy10512 160 ALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD-DISADTAEARAANILHGLGFTK---EMQQKKTKDFSG 235 (629)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSG 235 (629)
. ...+..+.++.++...+ +.+..+++ ....... ..........+.++++.+|+.. +..++.+.+|||
T Consensus 96 ~-------~~~~~~i~~v~q~~~l~-~~tv~eni-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSg 166 (276)
T PRK14271 96 V-------LEFRRRVGMLFQRPNPF-PMSIMDNV-LAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSG 166 (276)
T ss_pred h-------HHHhhheEEeccCCccC-CccHHHHH-HHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCH
Confidence 0 00011111111111111 12222222 2111111 1122233445678899999863 245778999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||+|||+|||||+.+|+||||||||++||+.++.+|.+.|.++ ..|||+||||++++..+||++++|++|+++..+..
T Consensus 167 Gq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~ 246 (276)
T PRK14271 167 GQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPT 246 (276)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988765 57999999999999999999999999999877543
No 357
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=316.36 Aligned_cols=205 Identities=20% Similarity=0.284 Sum_probs=172.0
Q ss_pred eEEEEEEEEEEcCC----------------------CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCcc
Q psy10512 399 VIMVQNVSFRYSDD----------------------GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVG 456 (629)
Q Consensus 399 ~l~~~~l~~~y~~~----------------------~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G 456 (629)
.|+++||++-|+.. ...-+.|+||+|+.|||..|+|-+|||||||+|+|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 47888888888631 11247899999999999999999999999999999999999999
Q ss_pred EEEECCc---------------eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCccccc
Q psy10512 457 MVRKNSH---------------LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVC 516 (629)
Q Consensus 457 ~i~~~~~---------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~ 516 (629)
+|.+++. .+++.++|.+. +.+..|++++...+ .+....++++.++|+.+||.++.. +
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa--LlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~-~ 160 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFA--LLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYAD-K 160 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc--cccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhh-c
Confidence 9999873 35777888764 44566788776543 344456778999999999998765 5
Q ss_pred CcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----hhcCceEEEEecCHHHHHhhcCEEEEEeC
Q psy10512 517 PIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAI----NDFEGGLVLVSHDFRLINQVAEEIWICEN 592 (629)
Q Consensus 517 ~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l----~~~~~~vi~vsHd~~~~~~~~d~i~~l~~ 592 (629)
++.+|||||||||.|||||+.+|+|||+|||+|+|||--+..+.+.| .++++|||+||||++++.++.|||.+|++
T Consensus 161 yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkd 240 (386)
T COG4175 161 YPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKD 240 (386)
T ss_pred CcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecC
Confidence 67999999999999999999999999999999999997666555554 45678999999999999999999999999
Q ss_pred CEEEEecCCHHHHHH
Q psy10512 593 GKVTKWEGNILDYKE 607 (629)
Q Consensus 593 G~i~~~~g~~~~~~~ 607 (629)
|+|+ ..|+++++..
T Consensus 241 G~iv-Q~Gtp~eIl~ 254 (386)
T COG4175 241 GEIV-QVGTPEEILL 254 (386)
T ss_pred CeEE-EeCCHHHHHc
Confidence 9998 4788877643
No 358
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2e-38 Score=316.96 Aligned_cols=205 Identities=28% Similarity=0.369 Sum_probs=158.3
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +.......+.++.
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~--~~~~~~~~~~~~~-- 76 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHP--WTRKDLHKIGSLI-- 76 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEe--ccccccccEEEEc--
Confidence 468999999998899999999999999999999999999999999999999999998875432 1110000010110
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
+....++..+..+++ .....+... ...++.++++.+|+. +..++++.+|||||+||++|||||
T Consensus 77 -----------q~~~~~~~~t~~~~~-~~~~~~~~~----~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~~rv~laral 139 (223)
T TIGR03740 77 -----------ESPPLYENLTARENL-KVHTTLLGL----PDSRIDEVLNIVDLT-NTGKKKAKQFSLGMKQRLGIAIAL 139 (223)
T ss_pred -----------CCCCccccCCHHHHH-HHHHHHcCC----CHHHHHHHHHHcCCc-HHHhhhHhhCCHHHHHHHHHHHHH
Confidence 000011111122222 211111111 134678899999997 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+.+|++|||||||++||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++..+.+
T Consensus 140 ~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 208 (223)
T TIGR03740 140 LNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKI 208 (223)
T ss_pred hcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecCh
Confidence 9999999999999999999999999988765 57999999999999999999999999999876543
No 359
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.3e-38 Score=314.46 Aligned_cols=192 Identities=27% Similarity=0.395 Sum_probs=161.8
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce--------eEE
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL--------RFA 467 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~--------~~~ 467 (629)
++++|+++|+++.|++ . .+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. .++
T Consensus 8 ~~~~l~~~~l~~~~~~-~-~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~ 85 (214)
T PRK13543 8 APPLLAAHALAFSRNE-E-PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMA 85 (214)
T ss_pred CcceEEEeeEEEecCC-c-eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceE
Confidence 4568999999999963 3 48999999999999999999999999999999999999999999988732 377
Q ss_pred eeccchhcccCCCCCHHHHHhhc--CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQS--FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|++|... +....++.+++... .......+.+..+++.+++.... +.++.+|||||||||+|||+++.+|++||||
T Consensus 86 ~~~q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllD 162 (214)
T PRK13543 86 YLGHLPG--LKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYE-DTLVRQLSAGQKKRLALARLWLSPAPLWLLD 162 (214)
T ss_pred EeecCcc--cccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhc-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8877642 33445777765321 11112345677899999997654 5678999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeC
Q psy10512 546 EPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICEN 592 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~ 592 (629)
|||++||+.+++.+.+.|.++ +.|||++|||++++..+||++++++.
T Consensus 163 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 163 EPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999765 67999999999999999999999863
No 360
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-38 Score=319.94 Aligned_cols=203 Identities=21% Similarity=0.279 Sum_probs=166.2
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcC---CCC--CccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGD---LTP--SVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~---~~p--~~G~i~~~~~--------- 463 (629)
++|+++|+++.|+. ..+|+++||+|.+|++++|+||||||||||+++|+|+ ++| ++|+|.+++.
T Consensus 2 ~~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 2 VKIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred cEEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 57999999999964 3489999999999999999999999999999999997 455 5899988763
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC-----C-ChhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF-----P-EVKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +.. .++.+++.... . .....+.+.++++.+|+... ...+++.+|||||||||+
T Consensus 80 ~~~~~~i~~v~q~~~--~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 156 (250)
T PRK14245 80 DELRKNVGMVFQRPN--PFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLC 156 (250)
T ss_pred HHHhhheEEEecCCc--cCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHH
Confidence 13788888753 222 47777654211 1 11233567788999998531 234577899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+++++.
T Consensus 157 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~-~~~~~~~~~ 233 (250)
T PRK14245 157 IARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMV-EYDDTKKIF 233 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999999999999999876 368999999999999999999999999997 467776654
No 361
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=319.35 Aligned_cols=202 Identities=20% Similarity=0.277 Sum_probs=167.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC---CCccEEEECCc-----------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT---PSVGMVRKNSH-----------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~---p~~G~i~~~~~-----------~ 464 (629)
+++++|+++.|+. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++. .
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 5789999999963 348999999999999999999999999999999999984 79999998763 2
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhc--C-----CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQS--F-----PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVFAYL 534 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~lAra 534 (629)
.++|++|+.. .+ ..++.+++... . +.....+++.++++.+++.. .....++.+|||||+|||+||||
T Consensus 80 ~i~~~~q~~~-l~--~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 80 NVGMVFQQPN-VF--VKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARA 156 (246)
T ss_pred hEEEEecCCc-cc--cccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHH
Confidence 4788888753 22 25777776421 1 11123445778999999953 12345678999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 535 AWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 535 l~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+..++.
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 229 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIE-FGESKEFF 229 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEE-ECCHHHHH
Confidence 99999999999999999999999999999875 5689999999999999999999999999974 57766553
No 362
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-38 Score=320.51 Aligned_cols=203 Identities=20% Similarity=0.226 Sum_probs=167.3
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
+|+|+++|+++.|+. ..+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 79 (251)
T PRK14270 2 KIKMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVD 79 (251)
T ss_pred ccEEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccccc
Confidence 468999999999963 3489999999999999999999999999999999999885 7999998752
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc--CC---C-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS--FP---E-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +. ..++.+++... .. . ....+++.++++.+|+.. .....++.+|||||||||
T Consensus 80 ~~~~~~~i~~~~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 80 VVELRKRVGMVFQKPN--PF-PMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRL 156 (251)
T ss_pred HHHHHhheEEEecCCC--cC-CCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHH
Confidence 23788888753 22 36777765421 11 1 122345678899998742 223457799999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.++.
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 233 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIE-FNKTEKI 233 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEE-eCCHHHH
Confidence 9999999999999999999999999999999999876 4689999999999999999999999999974 5776665
No 363
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=318.19 Aligned_cols=212 Identities=19% Similarity=0.282 Sum_probs=157.6
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++||+++|++.. .|+||+|.+|+++||+||||||||||+++|+|++.|++|++.+.+............+.++
T Consensus 2 l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~--- 76 (232)
T PRK10771 2 LKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSML--- 76 (232)
T ss_pred eEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEE---
Confidence 78999999998644 3999999999999999999999999999999999999999887643211000000001011
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
.+....++..+..+++ ................++.++++.+|+. ...++++.+|||||+|||+|||||
T Consensus 77 ----------~q~~~~~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~laral 144 (232)
T PRK10771 77 ----------FQENNLFSHLTVAQNI-GLGLNPGLKLNAAQREKLHAIARQMGIE-DLLARLPGQLSGGQRQRVALARCL 144 (232)
T ss_pred ----------ecccccccCCcHHHHH-hcccccccCCCHHHHHHHHHHHHHcCcH-HHHhCCcccCCHHHHHHHHHHHHH
Confidence 1111111111222222 1110000001123356788999999996 578999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++.+. |+.+.+
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~-g~~~~~ 217 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWD-GPTDEL 217 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEe-CCHHHH
Confidence 9999999999999999999999999888654 67999999999999999999999999999865 455544
No 364
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=324.44 Aligned_cols=217 Identities=18% Similarity=0.239 Sum_probs=159.8
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--C---CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV--P---VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~--p---~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|++. | +.|++.+.+. ++.......
T Consensus 12 ~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~--~~~~~~~~~- 88 (259)
T PRK14274 12 VYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGS--NILKGKVDL- 88 (259)
T ss_pred eEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCE--EccccccCH-
Confidence 6999999999998899999999999999999999999999999999999986 3 4687776543 221000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +.+..+++ ......... .......++.++++.+|+.. +..++++.+|||||
T Consensus 89 ------~~~~~~i~~v~q~~~~~-~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq 160 (259)
T PRK14274 89 ------VELRKNIGMVFQKGNPF-PQSIFDNV-AYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQ 160 (259)
T ss_pred ------HHHhhceEEEecCCccc-ccCHHHHH-HhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHH
Confidence 00000111111111111 11222222 211111111 22333456778899999852 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
|||++|||||+.+|+||||||||++||+.++..+.+.|.++ +.|+|+||||++++..+||++++|++|+++..+.+.
T Consensus 161 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 239 (259)
T PRK14274 161 QQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTN 239 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999998776 579999999999999999999999999999875443
No 365
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=319.39 Aligned_cols=203 Identities=21% Similarity=0.291 Sum_probs=166.0
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCC--CC---CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDL--TP---SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~--~p---~~G~i~~~~~-------- 463 (629)
.++|+++||++.|+. . .+|+++||+|.+||+++|+||||||||||+++|+|+. .| ++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~-~-~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~ 80 (252)
T PRK14239 3 EPILQVSDLSVYYNK-K-KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTD 80 (252)
T ss_pred CceEEEEeeEEEECC-e-eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccc
Confidence 357999999999963 3 4899999999999999999999999999999999995 46 5999998763
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc-----CCC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS-----FPE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +. ..++.+++... ... ....+.+..+++.+++.. ....+++.+|||||||||
T Consensus 81 ~~~~~~~i~~v~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 81 TVDLRKEIGMVFQQPN--PF-PMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hHhhhhcEEEEecCCc--cC-cCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHH
Confidence 14788888753 22 25777776421 111 112345677888998742 123457789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+..++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 234 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLI-EYNDTKQM 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999999999999999876 468999999999999999999999999997 46776665
No 366
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=329.22 Aligned_cols=215 Identities=21% Similarity=0.291 Sum_probs=160.7
Q ss_pred eEEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCC---CceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVP---DHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~---g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|++ +++|+|+||+|++|+++||+||||||||||+++|+|++.|+. |++.+.+. .+.......
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~--~~~~~~~~~- 81 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGI--TLTAKTVWD- 81 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCE--ECCcCCHHH-
Confidence 5999999999975 469999999999999999999999999999999999999987 67766443 221110000
Q ss_pred hhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
.+..+..+.+... .++..+..+++ ............+..+++.++++.+|+. +..++++.+|||||+||
T Consensus 82 --------~~~~ig~v~q~~~~~~~~~tv~enl-~~~~~~~~~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LS~G~~qr 151 (282)
T PRK13640 82 --------IREKVGIVFQNPDNQFVGATVGDDV-AFGLENRAVPRPEMIKIVRDVLADVGML-DYIDSEPANLSGGQKQR 151 (282)
T ss_pred --------HHhheEEEEECHHHhhccCCHHHHH-HhhHHhCCCCHHHHHHHHHHHHHHCCCh-hHhcCCcccCCHHHHHH
Confidence 0001111111110 11111222222 2111111223334456788999999997 57889999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
|+|||||+.+|+||||||||++||+.++..|.+.|.++ +.|||+||||++++. +||++++|++|++++.+.+.+
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~ 229 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVE 229 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999988654 679999999999995 799999999999998765433
No 367
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=323.31 Aligned_cols=217 Identities=22% Similarity=0.283 Sum_probs=159.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|++++|+++++|+|+||+|++||+++|+||||||||||+++|+|++. |++|++.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~--~~~~~~~~- 80 (251)
T PRK14251 4 IISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQN--IYGSKMDL- 80 (251)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEE--cccccchH-
Confidence 5899999999998899999999999999999999999999999999999986 367888775432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCC---chhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFT---KEMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGq 237 (629)
...+..+..+.++...+ +. +..++.......... ..+.....+.++++.+++. ....++++.+|||||
T Consensus 81 ------~~~~~~i~~~~q~~~~~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq 152 (251)
T PRK14251 81 ------VELRKEVGMVFQQPTPF-PF-SVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQ 152 (251)
T ss_pred ------HHhhccEEEEecCCccC-CC-cHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHH
Confidence 00000000111111111 11 222222211111111 1222345677889999984 234678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
+||++|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..+.+.
T Consensus 153 ~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 231 (251)
T PRK14251 153 QQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTE 231 (251)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999876 579999999999999999999999999999876543
No 368
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.8e-38 Score=354.74 Aligned_cols=208 Identities=22% Similarity=0.355 Sum_probs=170.1
Q ss_pred CCeEEEEEEEEEEcCC--CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc------
Q psy10512 397 PPVIMVQNVSFRYSDD--GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH------ 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~--~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~------ 463 (629)
.++|+++|+++.|+.+ ...+|+++||+|.+||++||+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 3 QPLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred CceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 4589999999999631 23489999999999999999999999999999999999997 7999988652
Q ss_pred ---------eeEEeeccchhcccCCCCCHHHHHhh------cCCChhhHHHHHHHHHHcCCCCc--ccccCcCcCChhHH
Q psy10512 464 ---------LRFARYHQHLHELLDLDISPLDYMLQ------SFPEVKDREEMRKIIGRYGLTGR--QQVCPIRQLSDGQK 526 (629)
Q Consensus 464 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqk 526 (629)
..++|++|+....+....++.+++.. ..+.....+++.++++.+||.+. ..++++.+||||||
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~ 162 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGER 162 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHH
Confidence 24789998753223333455544321 12222234668899999999752 23567899999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCH
Q psy10512 527 CRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602 (629)
Q Consensus 527 qrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 602 (629)
|||+|||||+.+|++|||||||++||+.++..+.++|.++ +.|||+||||++++..+||+|++|++|+++ +.|++
T Consensus 163 qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~ 241 (529)
T PRK15134 163 QRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV-EQNRA 241 (529)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE-EeCCH
Confidence 9999999999999999999999999999999999999774 578999999999999999999999999997 46776
Q ss_pred HHH
Q psy10512 603 LDY 605 (629)
Q Consensus 603 ~~~ 605 (629)
+++
T Consensus 242 ~~~ 244 (529)
T PRK15134 242 ATL 244 (529)
T ss_pred HHH
Confidence 665
No 369
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.7e-38 Score=326.08 Aligned_cols=219 Identities=23% Similarity=0.340 Sum_probs=161.2
Q ss_pred eEEEEeEEEEeC---------CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCC
Q psy10512 87 DVKIANFSITFH---------GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASD 157 (629)
Q Consensus 87 ~i~i~nls~~y~---------~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~ 157 (629)
+|+++||++.|+ ++.+|+|+||+|.+|++++|+||||||||||+++|+|++.|++|++.+.+.. +....
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~--~~~~~ 80 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEP--LAKLN 80 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEe--ccccC
Confidence 489999999997 4789999999999999999999999999999999999999999998876432 11100
Q ss_pred cchhhhhhhchHHHHHHHHHHHHH-hccCChhHHHHHHHH-HhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCCh
Q psy10512 158 KSALTCVMEVDEERVRLEKLAEQL-VACEDDESQEQLMDI-YDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235 (629)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 235 (629)
..... ..+..+..+.+.. ..+.+..+..++... ...+..........++.++++.+|+.....++.+.+|||
T Consensus 81 ~~~~~------~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~ 154 (268)
T PRK10419 81 RAQRK------AFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSG 154 (268)
T ss_pred hhHHH------HHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCCh
Confidence 00000 0000010111111 011111122222111 111112223334457889999999964567889999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||+||++|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++++.+
T Consensus 155 Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g 234 (268)
T PRK10419 155 GQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQ 234 (268)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeC
Confidence 9999999999999999999999999999999999988887644 679999999999999999999999999998765
Q ss_pred Cc
Q psy10512 312 GN 313 (629)
Q Consensus 312 g~ 313 (629)
.+
T Consensus 235 ~~ 236 (268)
T PRK10419 235 PV 236 (268)
T ss_pred Ch
Confidence 43
No 370
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=320.13 Aligned_cols=224 Identities=21% Similarity=0.315 Sum_probs=162.8
Q ss_pred EEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCc
Q psy10512 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDK 158 (629)
Q Consensus 88 i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~ 158 (629)
++++||+.+|.. ..+++||||+|++||++||||+|||||||+.+.|.|++++. .|++.+ .+.++...+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f--~g~~l~~l~~ 79 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILF--DGKDLLSLSE 79 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEE--CCcccccCCH
Confidence 789999999953 46999999999999999999999999999999999998732 244433 3332221110
Q ss_pred chhhhhhhchHHHHHHHHHHHH-HhccCC-hhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCch--hhhcccCCC
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQ-LVACED-DESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTKE--MQQKKTKDF 233 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~~--~~~~~~~~L 233 (629)
.....+. ...+..++|+ ...+.+ .....++.+....-... ...++.+++.++|+.+||+.. ..+.++++|
T Consensus 80 ~~~~~iR-----G~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhel 154 (316)
T COG0444 80 KELRKIR-----GKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHEL 154 (316)
T ss_pred HHHHhhc-----CceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCccc
Confidence 0000000 0000011111 011111 11222333322211122 345677899999999999854 679999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcCCeEEE
Q psy10512 234 SGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDKRKLKY 309 (629)
Q Consensus 234 SGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~ 309 (629)
||||+|||.||.||+.+|+|||.||||++||...+..++++|++ .+.++|+||||+..+.++||||+||..|+|++
T Consensus 155 SGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE 234 (316)
T COG0444 155 SGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVE 234 (316)
T ss_pred CCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEE
Confidence 99999999999999999999999999999999999998888764 47899999999999999999999999999999
Q ss_pred EcCcHHHHH
Q psy10512 310 YGGNYEAFC 318 (629)
Q Consensus 310 ~~g~~~~~~ 318 (629)
.|...+.|.
T Consensus 235 ~g~~~~i~~ 243 (316)
T COG0444 235 EGPVEEIFK 243 (316)
T ss_pred eCCHHHHhc
Confidence 987655543
No 371
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=319.22 Aligned_cols=203 Identities=19% Similarity=0.292 Sum_probs=166.9
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC--C---CccEEEECCc----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT--P---SVGMVRKNSH---------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~--p---~~G~i~~~~~---------- 463 (629)
.|+++|+++.|+. . .+|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.+++.
T Consensus 4 ~l~~~nl~~~~~~-~-~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 81 (252)
T PRK14256 4 KVKLEQLNVHFGK-N-HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPV 81 (252)
T ss_pred EEEEEEEEEEeCC-e-eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChH
Confidence 5899999999963 3 48999999999999999999999999999999999986 4 6899998762
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|+.. +....++.+++...+ ......+.+.++++.+|+.. .....++.+|||||+|||+|
T Consensus 82 ~~~~~i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 159 (252)
T PRK14256 82 SIRRRVGMVFQKPN--PFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCI 159 (252)
T ss_pred HhhccEEEEecCCC--CCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHH
Confidence 13678888743 334467777664211 11122355778899999853 12345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 160 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 235 (252)
T PRK14256 160 ARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVE-CGETKKIF 235 (252)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999877 4689999999999999999999999999974 67766653
No 372
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=324.34 Aligned_cols=222 Identities=19% Similarity=0.233 Sum_probs=162.4
Q ss_pred CCCceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCC
Q psy10512 82 HPKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPAS 156 (629)
Q Consensus 82 ~~~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~ 156 (629)
++...+|+++|++++|+++++|+|+||+|.+||++||+|||||||||||++|+|++. |++|++.+.+.. +...
T Consensus 15 ~~~~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~--~~~~ 92 (267)
T PRK14237 15 PEEEIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGID--INRK 92 (267)
T ss_pred CCCCeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEE--cccc
Confidence 334457999999999998899999999999999999999999999999999999986 468888765422 1100
Q ss_pred CcchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc-cChhhHHHHHHHHHHhCCCCc---hhhhcccCC
Q psy10512 157 DKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD-ISADTAEARAANILHGLGFTK---EMQQKKTKD 232 (629)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~ 232 (629)
..... ..+..+..+.+....+ +. +..++......... ........++.++++.+++.. +..++++.+
T Consensus 93 ~~~~~-------~~~~~i~~v~q~~~~~-~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~ 163 (267)
T PRK14237 93 EINVY-------EMRKHIGMVFQRPNPF-AK-SIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALT 163 (267)
T ss_pred cCChH-------HHhcceEEEecCCccc-cc-cHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCccc
Confidence 00000 0000011111111111 11 22222221111111 122234566788899999852 356788999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||||+||++|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|++++.
T Consensus 164 LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~ 243 (267)
T PRK14237 164 LSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEY 243 (267)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999988765 47999999999999999999999999999987
Q ss_pred cCcH
Q psy10512 311 GGNY 314 (629)
Q Consensus 311 ~g~~ 314 (629)
+.+.
T Consensus 244 g~~~ 247 (267)
T PRK14237 244 DKTR 247 (267)
T ss_pred CCHH
Confidence 6543
No 373
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.5e-38 Score=318.94 Aligned_cols=181 Identities=26% Similarity=0.437 Sum_probs=150.5
Q ss_pred eEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce----------eEEeeccchhcccCCCCCHH
Q psy10512 415 WIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------RFARYHQHLHELLDLDISPL 484 (629)
Q Consensus 415 ~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------~~~~~~q~~~~~~~~~~~~~ 484 (629)
.+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+++.. .++|++|... .+....++.
T Consensus 35 ~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~~~~tv~ 113 (236)
T cd03267 35 EALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKT-QLWWDLPVI 113 (236)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCcc-ccCCCCcHH
Confidence 48999999999999999999999999999999999999999999987642 4667653321 233456777
Q ss_pred HHHhh--c---CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q psy10512 485 DYMLQ--S---FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDAL 559 (629)
Q Consensus 485 ~~~~~--~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l 559 (629)
+++.. . .......+.+..+++.+|+.... ++++.+|||||||||+||+||+.+|++|||||||++||+.++..+
T Consensus 114 e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 192 (236)
T cd03267 114 DSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-DTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENI 192 (236)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHH
Confidence 66421 1 11112234567889999997543 457899999999999999999999999999999999999999999
Q ss_pred HHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 560 ADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 560 ~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 193 ~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 234 (236)
T cd03267 193 RNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLY 234 (236)
T ss_pred HHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 9999876 4689999999999999999999999999863
No 374
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=321.75 Aligned_cols=219 Identities=20% Similarity=0.236 Sum_probs=161.3
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+..| ++|++.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~--i~~~~~~~- 80 (251)
T PRK14270 4 KMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKN--IYDKDVDV- 80 (251)
T ss_pred EEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEe--cccccccH-
Confidence 58999999999988899999999999999999999999999999999999875 67888765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.+.... .+. +..++.......... .......++.++++.+|+.. ...++++.+|||||
T Consensus 81 ------~~~~~~i~~~~q~~~~-~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~ 152 (251)
T PRK14270 81 ------VELRKRVGMVFQKPNP-FPM-SIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQ 152 (251)
T ss_pred ------HHHHhheEEEecCCCc-CCC-cHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHH
Confidence 0000011111111111 111 222222221111111 12233456778999998742 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|++++++.+.+
T Consensus 153 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 153 QQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999999999998866 5799999999999999999999999999998866544
Q ss_pred H
Q psy10512 316 A 316 (629)
Q Consensus 316 ~ 316 (629)
.
T Consensus 233 ~ 233 (251)
T PRK14270 233 I 233 (251)
T ss_pred H
Confidence 3
No 375
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-38 Score=316.48 Aligned_cols=199 Identities=25% Similarity=0.370 Sum_probs=159.5
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|+... .+|+++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|
T Consensus 3 l~~~~l~~~~~~~~-~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 3 IEFENVNFSYDEKK-PVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred EEEEEEEEecCCCC-ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 78999999996323 3899999999999999999999999999999999999999999998762 24788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcC-----------CCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYG-----------LTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
++|... +.. .++.+++...... .....+..+++.++ +... ...++.+|||||||||+|||||+.
T Consensus 82 ~~q~~~--~~~-~tv~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 82 VLQDTF--LFS-GTIMENIRLGRPN-ATDEEVIEAAKEAGAHDFIMKLPNGYDTV-LGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred ecCCch--hhh-hHHHHHHhccCCC-CCHHHHHHHHHHhChHHHHHhCcccccCH-hhcCCCcCCHHHHHHHHHHHHHhc
Confidence 888753 222 3677766432221 12233444444443 3322 234568999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|++|||||||+|||+.+++.+.+.|.++ +.|||+||||++++. .||++++|++|+++ +.|+.+++.
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~i~~l~~g~~~-~~~~~~~~~ 225 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIK-NADKILVLDDGKII-EEGTHDELL 225 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHh-hCCEEEEEeCCeEE-EeCCHHHHH
Confidence 99999999999999999999999999876 368999999999996 49999999999997 467776654
No 376
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=324.81 Aligned_cols=212 Identities=23% Similarity=0.247 Sum_probs=158.0
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC--------CCceEEEeecccCCCCCcc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV--------PDHIDIFHLTREMPASDKS 159 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~--------~g~i~i~~~~~~~~~~~~~ 159 (629)
|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++|+ .|++.+.+.. +......
T Consensus 2 l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~--~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEP--LAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEE--cccCCHH
Confidence 88999999999999999999999999999999999999999999999999987 7877765422 1110000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHh--hh--hccChhhHHHHHHHHHHhCCCCchhhhcccCCCCh
Q psy10512 160 ALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYD--RL--DDISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235 (629)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l--~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSG 235 (629)
..+.....+.+........ +..++..... .. ..........++.++++.+|+. ...++++.+|||
T Consensus 80 ---------~~~~~~~~v~q~~~~~~~~-tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSg 148 (272)
T PRK13547 80 ---------RLARLRAVLPQAAQPAFAF-SAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-ALVGRDVTTLSG 148 (272)
T ss_pred ---------HHHhhcEEecccCCCCCCC-cHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCH
Confidence 0000011111111111111 2222221110 00 0001122345678899999996 567899999999
Q ss_pred HHHHHHHHHHHHc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEE
Q psy10512 236 GWRMRIALARALY---------VKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHL 302 (629)
Q Consensus 236 GqrqRv~LAraL~---------~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l 302 (629)
||+|||+|||||+ .+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 599999999999999999999999988653 679999999999999999999999
Q ss_pred cCCeEEEEcC
Q psy10512 303 DKRKLKYYGG 312 (629)
Q Consensus 303 ~~G~i~~~~g 312 (629)
++|+++..+.
T Consensus 229 ~~G~i~~~g~ 238 (272)
T PRK13547 229 ADGAIVAHGA 238 (272)
T ss_pred ECCeEEEecC
Confidence 9999987654
No 377
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=353.53 Aligned_cols=202 Identities=21% Similarity=0.312 Sum_probs=170.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
++|+++|++++|++ ..+|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+++. ..
T Consensus 3 ~~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 3 ALLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred ceEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 57999999999953 34899999999999999999999999999999999999999999998762 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC------C---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF------P---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
++|++|... +....++.+++.... . .....+++.++++.+|+.+.. ++++.+|||||||||+|||||+
T Consensus 81 i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~ 157 (501)
T PRK10762 81 IGIIHQELN--LIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-DKLVGELSIGEQQMVEIAKVLS 157 (501)
T ss_pred EEEEEcchh--ccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-cCchhhCCHHHHHHHHHHHHHh
Confidence 789988753 345678888764321 0 111234678899999997654 5678999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+++
T Consensus 158 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 228 (501)
T PRK10762 158 FESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIA-EREVADL 228 (501)
T ss_pred cCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ecCcCcC
Confidence 999999999999999999999999888765 5689999999999999999999999999974 5655443
No 378
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=322.32 Aligned_cols=217 Identities=20% Similarity=0.262 Sum_probs=157.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|++.|. +|++.+.+.. +........
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~--~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQD--IYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEE--cccCccCHH
Confidence 589999999999889999999999999999999999999999999999998875 5877765432 110000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
..+..+..+.++...+...+..+++ ......... ......+.+.+++..+++.. +..++++.+|||||
T Consensus 82 -------~~~~~i~~~~q~~~~~~~~t~~enl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 153 (252)
T PRK14272 82 -------AMRRRVGMVFQKPNPFPTMSVFDNV-VAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQ 153 (252)
T ss_pred -------HhhceeEEEeccCccCcCCCHHHHH-HHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHH
Confidence 0000011111111111111222222 211111111 12223455667777777631 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+||++|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|++++.+.+
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPT 231 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999998876 48999999999999999999999999999876543
No 379
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=326.64 Aligned_cols=212 Identities=22% Similarity=0.340 Sum_probs=159.4
Q ss_pred eEEEEeEEEEeC--CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFH--GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~--~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
+|+++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+.+... .......+
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i--~~~~~~~~--- 81 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITI--SKENLKEI--- 81 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEec--CcCCHHHH---
Confidence 599999999995 46799999999999999999999999999999999999999999988764321 11000000
Q ss_pred hhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
+..+..+.+... .+...+..+++ ........+.......++.++++.+|+. ...++.+.+|||||+||++|
T Consensus 82 ------~~~i~~v~q~~~~~~~~~tv~enl-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~l 153 (271)
T PRK13632 82 ------RKKIGIIFQNPDNQFIGATVEDDI-AFGLENKKVPPKKMKDIIDDLAKKVGME-DYLDKEPQNLSGGQKQRVAI 153 (271)
T ss_pred ------hcceEEEEeCHHHhcCcccHHHHH-HhHHHHcCCCHHHHHHHHHHHHHHcCCH-HHhhCCcccCCHHHHHHHHH
Confidence 000000001100 01111222222 2111111223333455788999999996 56789999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||||+.+|+||||||||++||+.++..+++.|+++ +.|||+||||++++. +||++++|++|++...+.
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~ 225 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGK 225 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999998765 379999999999996 799999999999987654
No 380
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-38 Score=323.28 Aligned_cols=204 Identities=22% Similarity=0.265 Sum_probs=167.5
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc-------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH------- 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~------- 463 (629)
+.++|+++||++.|+. . .+|+++||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 36 ~~~~l~i~~l~~~~~~-~-~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~ 113 (285)
T PRK14254 36 GETVIEARDLNVFYGD-E-QALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADV 113 (285)
T ss_pred CCceEEEEEEEEEECC-E-eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 4678999999999963 3 48999999999999999999999999999999999997 68999988763
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhhcC----CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQSF----PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|+.. +.. .++.+++.... ......+++.++++.+|+.. ....+++.+|||||||||+
T Consensus 114 ~~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 114 DPVALRRRIGMVFQKPN--PFP-KSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred chHhhhccEEEEecCCc--cCc-CCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHH
Confidence 13678888753 222 37777654211 11123456788999999852 1234577999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEE-EEeCCEEEEecCCHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIW-ICENGKVTKWEGNILDY 605 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~-~l~~G~i~~~~g~~~~~ 605 (629)
|||||+.+|+||||||||+|||+.++..+.++|+++ +.+||+||||++++..+||+++ +|++|+|+. .|+..++
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~-~g~~~~~ 267 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVE-FDDTDKI 267 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEE-eCCHHHH
Confidence 999999999999999999999999999999999887 4689999999999999999975 579999974 6776654
No 381
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-38 Score=319.32 Aligned_cols=203 Identities=23% Similarity=0.320 Sum_probs=165.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC-----ccEEEECCc----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS-----VGMVRKNSH---------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~-----~G~i~~~~~---------- 463 (629)
+|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++.
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 6899999999963 34899999999999999999999999999999999999874 899988762
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhcC--C---Ch-hhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQSF--P---EV-KDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|+.. +....++.+++.... . .. ...+.+..++..+++.. ...+.++.+|||||+|||+|
T Consensus 82 ~~~~~i~~~~q~~~--~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 159 (252)
T PRK14272 82 AMRRRVGMVFQKPN--PFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCI 159 (252)
T ss_pred HhhceeEEEeccCc--cCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHH
Confidence 14778888753 344467777664211 1 11 12234556677776531 12346789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|+++. .|||++|||++++..+||++++|++|+++ ..|+.+++.
T Consensus 160 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 235 (252)
T PRK14272 160 ARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLV-EHGPTDQLF 235 (252)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 999999999999999999999999999999998763 78999999999999999999999999997 467776654
No 382
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-38 Score=321.68 Aligned_cols=205 Identities=21% Similarity=0.306 Sum_probs=168.2
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
.++|.++||+++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 19 ~~~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 96 (276)
T PRK14271 19 APAMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96 (276)
T ss_pred CcEEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchh
Confidence 568999999999963 3489999999999999999999999999999999999986 6999998762
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +.. .++.+++.... ........+.++++.+|+... ...+++.+|||||+|||+
T Consensus 97 ~~~~~~i~~v~q~~~--l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 97 LEFRRRVGMLFQRPN--PFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HHHhhheEEeccCCc--cCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 24678888753 222 57777664321 111122345678899998642 224567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
|||||+.+|+||||||||++||+.+++.|.+.|.++ ..|||+||||++++..+||++++|++|+++. .|+.+++.+
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 251 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVE-EGPTEQLFS 251 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 999999999999999999999999999999999876 4689999999999999999999999999974 677776643
No 383
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-38 Score=313.33 Aligned_cols=189 Identities=26% Similarity=0.350 Sum_probs=158.0
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------e
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------------L 464 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------------~ 464 (629)
+.+ +|+++|++ ..+ |+||+|++ ++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 2 ~~~-~l~~~~~~--~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPD--FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCC--eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 345 89999964 224 99999999 999999999999999999999999999999988763 1
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcC---CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSF---PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
.++|++|... +....++.+++.... ......+++.++++.+|+... .++++.+|||||||||+|||||+.+|++
T Consensus 76 ~i~~~~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~G~~qrv~la~al~~~p~l 152 (214)
T cd03297 76 KIGLVFQQYA--LFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHL-LNRYPAQLSGGEKQRVALARALAAQPEL 152 (214)
T ss_pred cEEEEecCCc--cCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhH-hhcCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 4778888753 334567777654221 111234567889999999754 3567899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||||||+|||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|+++.
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 153 LLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 9999999999999999999998765 5689999999999999999999999999864
No 384
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-38 Score=318.54 Aligned_cols=203 Identities=23% Similarity=0.270 Sum_probs=166.9
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~--------- 463 (629)
++|+++|+++.|++ ..+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 2 PIIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred ceEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 37899999999963 3489999999999999999999999999999999999984 8999998762
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhc--C---CC-hhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQS--F---PE-VKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|+.. +. ..++.+++... . .. ....+.+..+++.+|+... ....++.+|||||+|||+
T Consensus 80 ~~~~~~i~~~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~ 156 (250)
T PRK14262 80 TEYRKKVGMVFQKPT--PF-PMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLC 156 (250)
T ss_pred HHhhhhEEEEecCCc--cC-cccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHH
Confidence 24778888653 22 36777766421 1 11 1123456778899998532 235578999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 157 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 233 (250)
T PRK14262 157 IARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELI-EYGPTREIV 233 (250)
T ss_pred HHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHHHH
Confidence 999999999999999999999999999999999876 468999999999999999999999999997 467776654
No 385
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-38 Score=321.58 Aligned_cols=201 Identities=30% Similarity=0.378 Sum_probs=167.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC--------ccEEEECCce------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS--------VGMVRKNSHL------ 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~--------~G~i~~~~~~------ 464 (629)
||+++|+++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++..
T Consensus 1 ml~~~nl~~~~~~-~-~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 1 MLTADHLHVARRH-R-AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred CeEEEEEEEEECC-E-eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 4889999999953 3 4899999999999999999999999999999999999998 9999987631
Q ss_pred -----eEEeeccchhcccCCCCCHHHHHhhcC-C--------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHH
Q psy10512 465 -----RFARYHQHLHELLDLDISPLDYMLQSF-P--------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 465 -----~~~~~~q~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 530 (629)
.++|++|... ..+..++.+++.... + .....+.+.++++.+|+.... ++++.+|||||+|||+
T Consensus 79 ~~~~~~~~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~ 155 (272)
T PRK13547 79 PRLARLRAVLPQAAQ--PAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-GRDVTTLSGGELARVQ 155 (272)
T ss_pred HHHHhhcEEecccCC--CCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHH
Confidence 2577787643 223467777764321 1 011234578899999997644 4678999999999999
Q ss_pred HHHHHc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 531 FAYLAW---------QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 531 lAral~---------~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|||||+ .+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++
T Consensus 156 laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~- 234 (272)
T PRK13547 156 FARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIV- 234 (272)
T ss_pred HHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-
Confidence 999999 599999999999999999999999998765 468999999999999999999999999997
Q ss_pred ecCCHHHH
Q psy10512 598 WEGNILDY 605 (629)
Q Consensus 598 ~~g~~~~~ 605 (629)
..|+.+++
T Consensus 235 ~~g~~~~~ 242 (272)
T PRK13547 235 AHGAPADV 242 (272)
T ss_pred EecCHHHH
Confidence 46777665
No 386
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=298.84 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=166.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------eEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-----------RFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-----------~~~ 467 (629)
||+++|++++..+ + .+++++||++.+||+++|+||||||||||||.|+|.+.|++|++.+++.. ..+
T Consensus 1 mi~a~nls~~~~G-r-~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~ra 78 (259)
T COG4559 1 MIRAENLSYSLAG-R-RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRA 78 (259)
T ss_pred CeeeeeeEEEeec-c-eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhh
Confidence 5889999999853 3 48999999999999999999999999999999999999999999998742 234
Q ss_pred eeccchhcccCCCCCHHHHHhhcC-C----Ch--hhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc---
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSF-P----EV--KDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ--- 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~-~----~~--~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~--- 537 (629)
.++|... +.+..++.+.+..+. + .. .+.+.++++|.+.++.+...+ ...+|||||||||.|||.|++
T Consensus 79 VlpQ~s~--laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R-~y~~LSGGEqQRVqlARvLaQl~~ 155 (259)
T COG4559 79 VLPQNSS--LAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGR-DYRTLSGGEQQRVQLARVLAQLWP 155 (259)
T ss_pred hcccCcc--cccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhcc-chhhcCchHHHHHHHHHHHHHccC
Confidence 4566543 455667777654331 1 11 234457889999999876654 457999999999999999976
Q ss_pred ---CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 538 ---APHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 538 ---~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
++++|+|||||+.||+..+..++++.+++ +++|+.|-||++++..+||||++|++|+++. .|++.+.
T Consensus 156 ~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a-~g~p~~v 228 (259)
T COG4559 156 PVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIA-SGSPQDV 228 (259)
T ss_pred CCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEee-cCCHHHh
Confidence 34599999999999999999999998877 5689999999999999999999999999984 7887664
No 387
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-38 Score=319.25 Aligned_cols=202 Identities=18% Similarity=0.275 Sum_probs=166.0
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~--------- 463 (629)
++|+++|++++|+. . .+|+++||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~-~-~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 3 NIISAKDVHLSYGN-Y-EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred ceEEEEeeEEEECC-e-eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 47999999999963 3 48999999999999999999999999999999999997 48999988763
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC-----CC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF-----PE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +. ..++.+++.... .. ....+.+..+++.+++.. ...+.++.+|||||+||++
T Consensus 81 ~~~~~~i~~~~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~ 157 (251)
T PRK14251 81 VELRKEVGMVFQQPT--PF-PFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRIC 157 (251)
T ss_pred HHhhccEEEEecCCc--cC-CCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHH
Confidence 13678887753 22 357777664221 11 112345678889999842 1234577899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||||+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+++
T Consensus 158 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 233 (251)
T PRK14251 158 IARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIE-AGPTEEM 233 (251)
T ss_pred HHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEE-eCCHHHH
Confidence 999999999999999999999999999999999876 5689999999999999999999999999975 5776654
No 388
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=325.48 Aligned_cols=221 Identities=19% Similarity=0.264 Sum_probs=159.2
Q ss_pred CCceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCC
Q psy10512 83 PKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASD 157 (629)
Q Consensus 83 ~~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~ 157 (629)
|...+|+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|++. |++|++.+.+.. +....
T Consensus 20 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~--~~~~~ 97 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQN--IFDKS 97 (271)
T ss_pred CCceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEE--ccccc
Confidence 44557999999999998889999999999999999999999999999999999987 578888775432 11000
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCC---chhhhcccCCC
Q psy10512 158 KSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFT---KEMQQKKTKDF 233 (629)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~L 233 (629)
.... ..+..+..+.+....+ ..+..+++ ......... ........+.++++.+++. .+..++++.+|
T Consensus 98 ~~~~-------~~~~~i~~v~q~~~~~-~~tv~eni-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~L 168 (271)
T PRK14238 98 YSVE-------ELRTNVGMVFQKPNPF-PKSIYDNV-TYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGL 168 (271)
T ss_pred ccHH-------HHhhhEEEEecCCccc-cccHHHHH-HHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccC
Confidence 0000 0000000011111111 11122222 211111111 1112344567777777542 23567889999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 234 SGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 234 SGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
||||||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++.++
T Consensus 169 SgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g 248 (271)
T PRK14238 169 SGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYD 248 (271)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999988776 579999999999999999999999999999876
Q ss_pred CcH
Q psy10512 312 GNY 314 (629)
Q Consensus 312 g~~ 314 (629)
...
T Consensus 249 ~~~ 251 (271)
T PRK14238 249 DTD 251 (271)
T ss_pred CHH
Confidence 543
No 389
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-38 Score=321.28 Aligned_cols=204 Identities=20% Similarity=0.191 Sum_probs=166.1
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~-------- 463 (629)
+++|+++||++.|+. ..+|+++||+|++|++++|+||||||||||+++|+|+++ |++|+|.+++.
T Consensus 11 ~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 11 NIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred CceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 468999999999963 348999999999999999999999999999999999987 69999998763
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhcC--C--ChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQSF--P--EVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|+.. +.. .|+.+++.... . .....+.+.++++.+++.. ...++++.+|||||||||+|
T Consensus 89 ~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 89 PVEVRRRIGMVFQQPN--PFP-KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred HHHHhhceEEEccCCc--cch-hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHH
Confidence 14788888753 222 37777664221 1 1122355677888888742 22345778999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeC-----------CEEEEe
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICEN-----------GKVTKW 598 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~-----------G~i~~~ 598 (629)
||||+.+|++|||||||+|||+.++..+.++|.++ +.|||+||||++++..+||++++|++ |+++ .
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~-~ 244 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLV-E 244 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEE-E
Confidence 99999999999999999999999999999999876 36899999999999999999999996 5566 4
Q ss_pred cCCHHHHH
Q psy10512 599 EGNILDYK 606 (629)
Q Consensus 599 ~g~~~~~~ 606 (629)
.|+..++.
T Consensus 245 ~~~~~~~~ 252 (269)
T PRK14259 245 FNETKKIF 252 (269)
T ss_pred eCCHHHHH
Confidence 67776653
No 390
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-38 Score=315.76 Aligned_cols=201 Identities=28% Similarity=0.415 Sum_probs=161.9
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|+.....+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643224899999999999999999999999999999999999999999998763 24788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHH---------HHHHHHHHc--CCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDRE---------EMRKIIGRY--GLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~--gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
++|+.. +. ..++.+++....... ... .+.++++.+ ++... ...++.+|||||+|||+|||||+.
T Consensus 81 ~~q~~~--~~-~~tv~enl~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~LS~G~~qrv~la~al~~ 155 (234)
T cd03251 81 VSQDVF--LF-NDTVAENIAYGRPGA-TREEVEEAARAANAHEFIMELPEGYDTV-IGERGVKLSGGQRQRIAIARALLK 155 (234)
T ss_pred eCCCCe--ec-cccHHHHhhccCCCC-CHHHHHHHHHHcCcHHHHHhcccCccee-eccCCCcCCHHHHHHHHHHHHHhc
Confidence 888753 22 357777765322111 111 123445555 55543 345678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|++|||||||++||+.+++.+.+.|.++ +.+||+||||++++.. ||++++|++|+++ ..|+++++..
T Consensus 156 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~-~~~~~~~~~~ 225 (234)
T cd03251 156 DPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIV-ERGTHEELLA 225 (234)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEe-eeCCHHHHHH
Confidence 99999999999999999999999999876 5689999999999976 9999999999997 4677766643
No 391
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.1e-38 Score=316.32 Aligned_cols=208 Identities=28% Similarity=0.380 Sum_probs=159.7
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCc--chhhhhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDK--SALTCVM 165 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~--~~~~~~~ 165 (629)
|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|.+|++.+.+.. +..... ..+.++
T Consensus 1 i~i~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~--~~~~~~~~~~i~~~- 77 (237)
T TIGR00968 1 IEIANISKRFGSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQD--ATRVHARDRKIGFV- 77 (237)
T ss_pred CEEEEEEEEECCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--cCcCChhhcCEEEE-
Confidence 478999999999899999999999999999999999999999999999999999998875432 111000 001111
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
. +....++..+..+++ ...............+.+.++++.+++. ...++.+.+|||||+||++|||
T Consensus 78 --~----------q~~~~~~~~t~~enl-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrl~lar 143 (237)
T TIGR00968 78 --F----------QHYALFKHLTVRDNI-AFGLEIRKHPKAKIKARVEELLELVQLE-GLGDRYPNQLSGGQRQRVALAR 143 (237)
T ss_pred --e----------cChhhccCCcHHHHH-HhHHHhcCCCHHHHHHHHHHHHHHcCCH-hHhhCChhhCCHHHHHHHHHHH
Confidence 0 000111111122222 1111111122223345678899999996 5788999999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+.+|++|||||||++||+.++.++.+.|.+. +.|||++||+++++..+||++++|++|++++.+.
T Consensus 144 al~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 214 (237)
T TIGR00968 144 ALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGS 214 (237)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecC
Confidence 999999999999999999999999999988754 6899999999999999999999999999987644
No 392
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-38 Score=303.88 Aligned_cols=212 Identities=23% Similarity=0.271 Sum_probs=160.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcc--hhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKS--ALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~--~~~~~ 164 (629)
+++++||+..||..++|++|||++++||+++|+|+||+||||||++|+|+.+|.+|+|.+.+. ++...... ....+
T Consensus 3 mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~--dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGE--DITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCe--ecCCCCHHHHHhCCe
Confidence 599999999999999999999999999999999999999999999999999999999887643 33222110 10111
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHH-HHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEA-RAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
..+++.|. .+ +..++++++.+.... ...+.... ..+++.+.|---.+..+++..+|||||||.++|
T Consensus 81 ~~VPegR~----------iF-~~LTVeENL~~g~~~--~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAi 147 (237)
T COG0410 81 AYVPEGRR----------IF-PRLTVEENLLLGAYA--RRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAI 147 (237)
T ss_pred EeCccccc----------ch-hhCcHHHHHhhhhhc--ccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHH
Confidence 11111111 12 223333333321111 11111111 266677777544578899999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||||+.+|++|||||||.||-|.-+..+++.++++ +.||++|.++..++..++||.++|++|+++..|..
T Consensus 148 aRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~ 221 (237)
T COG0410 148 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTA 221 (237)
T ss_pred HHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCH
Confidence 99999999999999999999999999999988655 45999999999999999999999999999976544
No 393
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.9e-38 Score=314.38 Aligned_cols=191 Identities=25% Similarity=0.365 Sum_probs=158.3
Q ss_pred eEEEEEEEEEEcC----C-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEEC--C---c-----
Q psy10512 399 VIMVQNVSFRYSD----D-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKN--S---H----- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~----~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~--~---~----- 463 (629)
+|+++|+++.|+. + ...+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++ + .
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 4789999999952 1 1358999999999999999999999999999999999999999999986 2 1
Q ss_pred ---------eeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHH
Q psy10512 464 ---------LRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +....++.+++... .......+.+.++++.+|+.....+.++.+|||||+|||
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl 158 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLR--VIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRV 158 (224)
T ss_pred HHHHHHHHhcceEEEecccc--cCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHH
Confidence 24788888753 34456776665321 111123456788999999975444567899999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEe
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICE 591 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~ 591 (629)
+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||.+++..+||+++.+.
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 159 NIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 9999999999999999999999999999999999875 4689999999999999999999763
No 394
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=324.00 Aligned_cols=219 Identities=19% Similarity=0.269 Sum_probs=158.3
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcch
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
.+|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+++ |++|++.+.+.. +.......
T Consensus 12 ~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~--i~~~~~~~ 89 (269)
T PRK14259 12 IIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTD--LYDPRVDP 89 (269)
T ss_pred ceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEE--cccccCCH
Confidence 36999999999998899999999999999999999999999999999999986 578888765422 11000000
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCC---chhhhcccCCCChHH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFT---KEMQQKKTKDFSGGW 237 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +. +..++........... ....+++.++++.+++. .+..++++.+|||||
T Consensus 90 -------~~~~~~i~~v~q~~~l~-~~-tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 159 (269)
T PRK14259 90 -------VEVRRRIGMVFQQPNPF-PK-SIYENIAFGARINGYT-GDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQ 159 (269)
T ss_pred -------HHHhhceEEEccCCccc-hh-hHHHHHhhhhhhcCCc-HHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHH
Confidence 00000011111111111 11 2222222111111111 12345667788888764 235688899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcC-----------
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDK----------- 304 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~----------- 304 (629)
||||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999876 47999999999999999999999996
Q ss_pred CeEEEEcCcHHH
Q psy10512 305 RKLKYYGGNYEA 316 (629)
Q Consensus 305 G~i~~~~g~~~~ 316 (629)
|++++.+.+.+.
T Consensus 240 g~~~~~~~~~~~ 251 (269)
T PRK14259 240 GYLVEFNETKKI 251 (269)
T ss_pred ceEEEeCCHHHH
Confidence 567777655443
No 395
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=325.56 Aligned_cols=217 Identities=18% Similarity=0.257 Sum_probs=159.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||++.|+++.+|+|+||+|++|++++|+|||||||||||++|+|++. |++|+|.+.+............
T Consensus 39 ~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~~~- 117 (285)
T PRK14254 39 VIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDPVA- 117 (285)
T ss_pred eEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccchHh-
Confidence 5999999999998899999999999999999999999999999999999986 5788887754321000000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK---EMQQKKTKDFSGGWR 238 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGqr 238 (629)
.+..+..+.+....+ +. +..++............ ....++.++++.+|+.. +..++++.+||||||
T Consensus 118 --------~~~~i~~v~q~~~l~-~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~ 186 (285)
T PRK14254 118 --------LRRRIGMVFQKPNPF-PK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQ 186 (285)
T ss_pred --------hhccEEEEecCCccC-cC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHH
Confidence 000000011111111 11 22222221111111111 33456888999999852 356788999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeE-EEcCCeEEEEcCcHH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNII-HLDKRKLKYYGGNYE 315 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii-~l~~G~i~~~~g~~~ 315 (629)
|||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+++ +|++|+++..+...+
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999876 4799999999999999999975 679999998755433
No 396
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=325.02 Aligned_cols=212 Identities=20% Similarity=0.241 Sum_probs=158.3
Q ss_pred eEEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
+|+++|++++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+.+.. +.......
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~--~~~~~~~~---- 80 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQA--ITDDNFEK---- 80 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEE--CCcCCHHH----
Confidence 5999999999975 359999999999999999999999999999999999999999998875432 11100000
Q ss_pred hhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
.+..+..+.++.. .+......+++ ................++.++++.+|+. +..++++.+||||||||++|
T Consensus 81 -----~~~~i~~v~q~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~l 153 (269)
T PRK13648 81 -----LRKHIGIVFQNPDNQFVGSIVKYDV-AFGLENHAVPYDEMHRRVSEALKQVDML-ERADYEPNALSGGQKQRVAI 153 (269)
T ss_pred -----HHhheeEEEeChHHhcccccHHHHH-HhhHHhcCCCHHHHHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHH
Confidence 0000101111100 01111111221 1111111122333445778899999996 56788999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++.. ||+|++|++|+++..+.
T Consensus 154 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~ 225 (269)
T PRK13648 154 AGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGT 225 (269)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999988754 5799999999999985 99999999999987654
No 397
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-38 Score=316.08 Aligned_cols=211 Identities=25% Similarity=0.337 Sum_probs=159.9
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|+++.|++. +|+|+||+|.+|++++|+||||||||||+++|+|+++|+.|++.+.+............+..
T Consensus 1 l~~~~l~~~~~~~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~---- 75 (235)
T cd03299 1 LKVENLSKDWKEF-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISY---- 75 (235)
T ss_pred CeeEeEEEEeCCc-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEE----
Confidence 4689999999875 89999999999999999999999999999999999999999988765321100000000000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..++...++..+..+++ .................+.++++.+|+. ...++.+.+|||||+|||+|||||
T Consensus 76 ---------~~q~~~~~~~~t~~e~l-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral 144 (235)
T cd03299 76 ---------VPQNYALFPHMTVYKNI-AYGLKKRKVDKKEIERKVLEIAEMLGID-HLLNRKPETLSGGEQQRVAIARAL 144 (235)
T ss_pred ---------EeecCccCCCccHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHcCCh-hHHhcCcccCCHHHHHHHHHHHHH
Confidence 11111111111222222 2111111122334456778899999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
+.+|++|||||||++||+.++.++++.|+++ +.|||++||+++++..+||++++|++|++++.+ +++
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~-~~~ 215 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVG-KPE 215 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEec-CHH
Confidence 9999999999999999999999999988764 689999999999999999999999999998764 444
No 398
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-38 Score=323.58 Aligned_cols=219 Identities=23% Similarity=0.304 Sum_probs=160.1
Q ss_pred CceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCc
Q psy10512 84 KSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDK 158 (629)
Q Consensus 84 ~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~ 158 (629)
...+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|++.| ++|++.+.+.. +.....
T Consensus 22 ~~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~--i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQN--IYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEE--Cccccc
Confidence 34469999999999988999999999999999999999999999999999999873 78888775432 111000
Q ss_pred chhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCC
Q psy10512 159 SALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFS 234 (629)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LS 234 (629)
.. ...+..+..+.+....+ +. +..++.......... .......++.++++.+++.. ...++.+.+||
T Consensus 100 ~~-------~~~~~~i~~v~q~~~l~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS 170 (272)
T PRK14236 100 DV-------AELRRRVGMVFQRPNPF-PK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLS 170 (272)
T ss_pred CH-------HHHhccEEEEecCCccC-cc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCC
Confidence 00 00000000111111111 11 222222211111111 11223456788899999853 35678899999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 235 GGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..+.
T Consensus 171 ~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~ 250 (272)
T PRK14236 171 GGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGD 250 (272)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999988765 5799999999999999999999999999987654
Q ss_pred c
Q psy10512 313 N 313 (629)
Q Consensus 313 ~ 313 (629)
.
T Consensus 251 ~ 251 (272)
T PRK14236 251 T 251 (272)
T ss_pred H
Confidence 3
No 399
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=319.97 Aligned_cols=203 Identities=17% Similarity=0.203 Sum_probs=167.4
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~-------- 463 (629)
.++|+++||+++|+. . .+|+|+||+|.+||+++|+|||||||||||++|+|+++ |++|+|.+++.
T Consensus 18 ~~~l~~~nl~~~~~~-~-~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 18 EIALSTKDLHVYYGK-K-EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred CeEEEEeeEEEEECC-e-eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 458999999999953 3 48999999999999999999999999999999999997 58999988762
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhcC--C----ChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQSF--P----EVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +. ..++.+++.... . .......+.++++.+++.. ....+++.+|||||+|||
T Consensus 96 ~~~~~~~i~~v~q~~~--~~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl 172 (267)
T PRK14237 96 VYEMRKHIGMVFQRPN--PF-AKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRL 172 (267)
T ss_pred hHHHhcceEEEecCCc--cc-cccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHH
Confidence 13788888743 22 247777764321 1 1122345678899999852 223467899999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||+.+|++|||||||++||+.++..+.+.|.++ +.+||+||||++++..+||++++|++|+++. .|+..++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 249 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIE-YDKTRNI 249 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999999999999999876 3689999999999999999999999999974 6777665
No 400
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-38 Score=351.84 Aligned_cols=203 Identities=22% Similarity=0.288 Sum_probs=171.1
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC--CccEEEECCc-----------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP--SVGMVRKNSH----------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~----------- 463 (629)
.++|+++|++++|++ ..+|+|+||+|.+|++++|+||||||||||+|+|+|+++| ++|+|.+++.
T Consensus 3 ~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~ 80 (506)
T PRK13549 3 EYLLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTE 80 (506)
T ss_pred CceEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHH
Confidence 358999999999963 3489999999999999999999999999999999999996 8999998763
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhcC--------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHH
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQSF--------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYL 534 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 534 (629)
..++|++|... +....++.+++.... ......+.+.++++.+|+... .++++.+|||||||||+||||
T Consensus 81 ~~~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 81 RAGIAIIHQELA--LVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDIN-PATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred HCCeEEEEeccc--cCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCC-cccchhhCCHHHHHHHHHHHH
Confidence 24789998753 344578887764321 111223567889999999754 456789999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 535 AWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 535 l~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|+.+|+||||||||++||+.++..+.+.|.++ +.+||+||||++++..+||+|++|++|+++ +.|+.+++
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 230 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHI-GTRPAAGM 230 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEe-eecccccC
Confidence 99999999999999999999999999998776 468999999999999999999999999997 45665544
No 401
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=336.96 Aligned_cols=212 Identities=23% Similarity=0.320 Sum_probs=158.3
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|++ ||+++|+++.+ |+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +....... ..
T Consensus 2 l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~--~~~~~~~~-----~~ 71 (352)
T PRK11144 2 LEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRV--LFDAEKGI-----CL 71 (352)
T ss_pred eEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--cccccccc-----cc
Confidence 777 99999988653 8999999999999999999999999999999999999998875432 11000000 00
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
...+..+..+.+....++..+..+++ ... +. .....++.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 72 ~~~~~~i~~v~q~~~l~~~~tv~enl-~~~--~~----~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qRvalaraL 143 (352)
T PRK11144 72 PPEKRRIGYVFQDARLFPHYKVRGNL-RYG--MA----KSMVAQFDKIVALLGIE-PLLDRYPGSLSGGEKQRVAIGRAL 143 (352)
T ss_pred chhhCCEEEEcCCcccCCCCcHHHHH-Hhh--hh----hhhHHHHHHHHHHcCCc-hhhhCCcccCCHHHHHHHHHHHHH
Confidence 00000111111111112222222222 111 00 12345688999999996 568999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHHH
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~~ 317 (629)
+.+|++|||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||++++|++|+++.++.+.+.+
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~ 217 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVW 217 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHH
Confidence 9999999999999999999999999888654 679999999999999999999999999999887655444
No 402
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=4.4e-38 Score=299.84 Aligned_cols=164 Identities=24% Similarity=0.312 Sum_probs=144.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCC
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~ 479 (629)
|+++|+++.|+.+ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++...++|++|+.. + .
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~--~-~ 76 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPY--L-P 76 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCc--c-c
Confidence 4689999999533 3489999999999999999999999999999999999999999999988778999998753 2 2
Q ss_pred CCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q psy10512 480 DISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDAL 559 (629)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l 559 (629)
..++.+++... ++.+|||||||||+|||||+.+|++|||||||++||+.++..+
T Consensus 77 ~~tv~~nl~~~--------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l 130 (166)
T cd03223 77 LGTLREQLIYP--------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRL 130 (166)
T ss_pred cccHHHHhhcc--------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHH
Confidence 34666554310 3478999999999999999999999999999999999999999
Q ss_pred HHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCE
Q psy10512 560 ADAINDFEGGLVLVSHDFRLINQVAEEIWICENGK 594 (629)
Q Consensus 560 ~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~ 594 (629)
.+.|.+++.|+|+||||.+++ .+||++++|+++.
T Consensus 131 ~~~l~~~~~tiiivsh~~~~~-~~~d~i~~l~~~~ 164 (166)
T cd03223 131 YQLLKELGITVISVGHRPSLW-KFHDRVLDLDGEG 164 (166)
T ss_pred HHHHHHhCCEEEEEeCChhHH-hhCCEEEEEcCCC
Confidence 999999888999999999876 6899999998764
No 403
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=318.16 Aligned_cols=206 Identities=23% Similarity=0.322 Sum_probs=168.0
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
..|+|.++|++++|++ ..+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 7 ~~~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~ 84 (257)
T PRK14246 7 AEDVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQID 84 (257)
T ss_pred hhhheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCC
Confidence 3578999999999963 34899999999999999999999999999999999999999977765431
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc-----CCC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS-----FPE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +....++.+++... +.. ......+.++++.+++.. .....++..||||||||+
T Consensus 85 ~~~~~~~i~~~~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl 162 (257)
T PRK14246 85 AIKLRKEVGMVFQQPN--PFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRL 162 (257)
T ss_pred HHHHhcceEEEccCCc--cCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHH
Confidence 24678887643 33446777765421 111 122345778899999853 223456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 163 ~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~-~g~~~~~~ 240 (257)
T PRK14246 163 TIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVE-WGSSNEIF 240 (257)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCHHHHH
Confidence 9999999999999999999999999999999999876 3689999999999999999999999999975 57666654
No 404
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=316.77 Aligned_cols=202 Identities=24% Similarity=0.296 Sum_probs=165.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH---------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~---------- 463 (629)
.|+++||++.|++ . .+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~l~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14240 3 KISVKDLDLFYGD-F-QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVN 80 (250)
T ss_pred eEEEEEEEEEECC-c-eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchH
Confidence 4899999999963 3 489999999999999999999999999999999999863 6999998762
Q ss_pred ---eeEEeeccchhcccCCCCCHHHHHhhc--CC---C-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHH
Q psy10512 464 ---LRFARYHQHLHELLDLDISPLDYMLQS--FP---E-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|... +.. .++.+++... .. . ....+.+.++++.+++.. ...++++.+|||||+|||+|
T Consensus 81 ~~~~~i~~~~q~~~--~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14240 81 QLRKRVGMVFQQPN--PFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCI 157 (250)
T ss_pred HHhccEEEEecCCc--cCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHH
Confidence 23778888753 222 5777765421 11 1 122456777888888742 12345789999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 233 (250)
T PRK14240 158 ARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVE-FGDTVDLF 233 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 4689999999999999999999999999974 67766653
No 405
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=320.63 Aligned_cols=220 Identities=24% Similarity=0.315 Sum_probs=164.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEee----cccCCCCCcchhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHL----TREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~----~~~~~~~~~~~~~ 162 (629)
.|+++|++++|+++.+|+|+||+|.+|++++|+||||||||||+++|+|++.|++|++.+.+. +..+.... .
T Consensus 10 ~i~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~--~-- 85 (257)
T PRK14246 10 VFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQID--A-- 85 (257)
T ss_pred heeeeeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCC--H--
Confidence 599999999999999999999999999999999999999999999999999999988765431 11110000 0
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGWR 238 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGqr 238 (629)
...+..+....++...+ +..+..++.......... .......++.++++.+|+.. +..++.+..||||||
T Consensus 86 -----~~~~~~i~~~~q~~~~~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 86 -----IKLRKEVGMVFQQPNPF-PHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQ 159 (257)
T ss_pred -----HHHhcceEEEccCCccC-CCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHH
Confidence 00011111111111111 111222222222111111 22334467888999999852 356788999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
||++|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+|||+++++..+||++++|++|+++.+++..+.
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999765 47999999999999999999999999999988765443
No 406
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.2e-38 Score=358.70 Aligned_cols=205 Identities=28% Similarity=0.373 Sum_probs=176.0
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRF 466 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~ 466 (629)
.-|+++||+|+|+.+.+++|+|+||+|++||++||||+||||||||+|+|+|+++|++|+|.+++. ..+
T Consensus 470 g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 470 GEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred ceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhhe
Confidence 358999999999877667999999999999999999999999999999999999999999999873 468
Q ss_pred EeeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccC----------cCcCChhHHHHHHHHHHHc
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCP----------IRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~ 536 (629)
+|+.|+.. -++-|+.+++....+.. ..+++.+++...|..+.....| ...||||||||++|||||+
T Consensus 550 g~V~Q~~~---Lf~gSI~eNi~l~~p~~-~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl 625 (709)
T COG2274 550 GYVLQDPF---LFSGSIRENIALGNPEA-TDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALL 625 (709)
T ss_pred eEEcccch---hhcCcHHHHHhcCCCCC-CHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhc
Confidence 99999753 35668899988776653 4456666766666644333222 3579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--ceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDFE--GGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~--~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
++|+|||||||||+||+++...+.+.|.++. .|+|+|||++..+. .||||+||++|+|+ .+|+.++..+.
T Consensus 626 ~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~-~adrIiVl~~Gkiv-~~gs~~ell~~ 697 (709)
T COG2274 626 SKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIR-SADRIIVLDQGKIV-EQGSHEELLAQ 697 (709)
T ss_pred cCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhh-hccEEEEccCCcee-ccCCHHHHHHh
Confidence 9999999999999999999999999999985 89999999999995 59999999999998 48998887654
No 407
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-39 Score=293.14 Aligned_cols=213 Identities=24% Similarity=0.342 Sum_probs=162.9
Q ss_pred eEEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhh
Q psy10512 87 DVKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 87 ~i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
.|+++++++..+. ..+|++|+|.|++||.++|||||||||||||-+++|+..|++|++.+.+.. ....+.....
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~--L~~ldEd~rA 83 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQP--LHKLDEDARA 83 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcc--hhhcCHHHHH
Confidence 5899999998864 469999999999999999999999999999999999999999999886432 1111100000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
. .....+..+++.+...++.+..+++ .+...+.+-...+....+.++|+.+|+. .....+|.+|||||||||+
T Consensus 84 ~-----~R~~~vGfVFQSF~Lip~ltAlENV-~lPleL~ge~~~~~~~~A~~lL~~vGLg-~Rl~HyP~qLSGGEQQRVA 156 (228)
T COG4181 84 A-----LRARHVGFVFQSFHLIPNLTALENV-ALPLELRGESSADSRAGAKALLEAVGLG-KRLTHYPAQLSGGEQQRVA 156 (228)
T ss_pred H-----hhccceeEEEEeeeccccchhhhhc-cchhhhcCCccccHHHHHHHHHHHhCcc-cccccCccccCchHHHHHH
Confidence 0 0001111222333333444444433 3333444434556677899999999997 5678899999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH----hhcCCEEEEEecCHHHHHhhcceeEEEcCCeEEE
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEEL----KTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKY 309 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L----~~~~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~ 309 (629)
|||||+..|+||+.||||.+||-.+-..+.++| ++.+.|+|+||||+..+.+ |+|++.|.+|+|+.
T Consensus 157 iARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~ 226 (228)
T COG4181 157 LARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeecceecc
Confidence 999999999999999999999999988777766 4457899999999999886 99999999999974
No 408
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.3e-38 Score=320.57 Aligned_cols=216 Identities=20% Similarity=0.286 Sum_probs=155.8
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCC--CCCCCceEEEeecccCCCCCcchh--h
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNRE--VPVPDHIDIFHLTREMPASDKSAL--T 162 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~--~p~~g~i~i~~~~~~~~~~~~~~~--~ 162 (629)
+|+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+. +|++|++.+.+.. +...+.... .
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~--~~~~~~~~~~~~ 78 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKD--LLELSPEDRAGE 78 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCc--cccCCHHHHhhc
Confidence 388999999999888999999999999999999999999999999999995 6889988775432 111000000 0
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhh------hccChhhHHHHHHHHHHhCCCCchhhhcccC-CCCh
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRL------DDISADTAEARAANILHGLGFTKEMQQKKTK-DFSG 235 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~-~LSG 235 (629)
.+..+.+... ..+..........+...+ ..+........+.++++.+++..+..++.+. +|||
T Consensus 79 ~i~~~~q~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~ 148 (248)
T PRK09580 79 GIFMAFQYPV----------EIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSG 148 (248)
T ss_pred ceEEEecCch----------hccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCH
Confidence 0000000000 000000000000000000 0011122345678899999996556677775 8999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhh-cceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGV-CTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~-~d~ii~l~~G~i~~~~ 311 (629)
||||||+|||||+.+|+||||||||++||+.++.++.+.|+++ ++|||+||||++++..+ ||+|++|++|++++.
T Consensus 149 G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~- 227 (248)
T PRK09580 149 GEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKS- 227 (248)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEe-
Confidence 9999999999999999999999999999999999999877654 67999999999999987 899999999999865
Q ss_pred CcHH
Q psy10512 312 GNYE 315 (629)
Q Consensus 312 g~~~ 315 (629)
|+++
T Consensus 228 g~~~ 231 (248)
T PRK09580 228 GDFT 231 (248)
T ss_pred CCHH
Confidence 4554
No 409
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.1e-37 Score=317.52 Aligned_cols=202 Identities=24% Similarity=0.367 Sum_probs=161.4
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcC--CCCCccEEEECCce----------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGD--LTPSVGMVRKNSHL---------- 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~--~~p~~G~i~~~~~~---------- 464 (629)
+++|+++||++.|++ . .+|+++||+|++||++||+|+||||||||+++|+|+ ++|++|+|.+++..
T Consensus 5 ~~~l~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T CHL00131 5 KPILEIKNLHASVNE-N-EILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERA 82 (252)
T ss_pred CceEEEEeEEEEeCC-E-EeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhh
Confidence 357999999999963 3 489999999999999999999999999999999998 58999999987631
Q ss_pred --eEEeeccchhcccCCCCCHHHHHhhcC---------CCh---hhHHHHHHHHHHcCCCCcccccCcC-cCChhHHHHH
Q psy10512 465 --RFARYHQHLHELLDLDISPLDYMLQSF---------PEV---KDREEMRKIIGRYGLTGRQQVCPIR-QLSDGQKCRV 529 (629)
Q Consensus 465 --~~~~~~q~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~l~~~gl~~~~~~~~~~-~LSgGqkqrv 529 (629)
.++|++|... +....+..+++.... ... ...+.+.++++.+|+......+++. .|||||+|||
T Consensus 83 ~~~~~~~~q~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv 160 (252)
T CHL00131 83 HLGIFLAFQYPI--EIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRN 160 (252)
T ss_pred eeeEEEEecccc--ccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHH
Confidence 2455666532 223345555432111 000 1124567889999997333344555 5999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhh-cCEEEEEeCCEEEEecCCHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQV-AEEIWICENGKVTKWEGNIL 603 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~ 603 (629)
+|||||+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+ ||++++|++|+++ +.|+++
T Consensus 161 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 237 (252)
T CHL00131 161 EILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKII-KTGDAE 237 (252)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEE-EecChh
Confidence 9999999999999999999999999999999999876 56899999999999887 8999999999997 567765
No 410
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=319.73 Aligned_cols=216 Identities=22% Similarity=0.283 Sum_probs=158.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++++|+|+||+|++|++++|+|||||||||||++|+|++.| ++|++.+.+.. +.......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~--~~~~~~~~- 79 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQD--IYDPQLDV- 79 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEE--cccchhhH-
Confidence 58999999999988999999999999999999999999999999999999874 67888765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+....++.. ..+.+..+++ ......... .....+..+.++++.+|+.. ...++++.+|||||
T Consensus 80 ------~~~~~~i~~~~q~~~-~~~~tv~e~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq 151 (250)
T PRK14262 80 ------TEYRKKVGMVFQKPT-PFPMSIYDNV-AFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQ 151 (250)
T ss_pred ------HHhhhhEEEEecCCc-cCcccHHHHH-HHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHH
Confidence 000000101111111 1111222222 211111111 11223456778899999853 24688899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+||++|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++.++.+
T Consensus 152 ~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (250)
T PRK14262 152 QQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPT 229 (250)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999998765 57999999999999999999999999999977543
No 411
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=320.15 Aligned_cols=217 Identities=19% Similarity=0.264 Sum_probs=158.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+++|+ .|.+.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~--~~~~~~~~- 80 (251)
T PRK14249 4 KIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNEN--IYSPNLDV- 80 (251)
T ss_pred eEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEE--ccccccCh-
Confidence 589999999999888999999999999999999999999999999999999887 4777765432 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccC-hhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDIS-ADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +.+..+++ .......... .......+.++++.+++.. +..++.+.+|||||
T Consensus 81 ------~~~~~~i~~v~q~~~~~-~~tv~enl-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq 152 (251)
T PRK14249 81 ------VNLRKRVGMVFQQPNPF-PKSIFDNV-AFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQ 152 (251)
T ss_pred ------HHhhceEEEEecCCccC-cCcHHHHH-hhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHH
Confidence 00000011111111111 11222222 2111111111 1223455677788888742 35678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
+|||+|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++.++.+.
T Consensus 153 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~ 231 (251)
T PRK14249 153 QQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTG 231 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHH
Confidence 99999999999999999999999999999999999988765 579999999999999999999999999998876543
No 412
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=314.25 Aligned_cols=200 Identities=24% Similarity=0.334 Sum_probs=168.0
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|.++|+++.|+. . +|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~ 77 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVP 77 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEe
Confidence 468999999953 3 799999999999999999999999999999999999999999998763 2578888
Q ss_pred cchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|... +....++.+++.... ......+.+.++++.+|+.... .+++.+|||||+|||+||||++.+|++||||
T Consensus 78 q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllD 154 (235)
T cd03299 78 QNYA--LFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLL-NRKPETLSGGEQQRVAIARALVVNPKILLLD 154 (235)
T ss_pred ecCc--cCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHH-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 8742 334567777664221 1112345677899999997544 4577999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+|||+.+++.+.+.|+++ +.|||++|||++++..+||++++|++|+++ ..|+++++.
T Consensus 155 EPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 218 (235)
T cd03299 155 EPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLI-QVGKPEEVF 218 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EecCHHHHH
Confidence 999999999999999998764 568999999999999999999999999997 467766554
No 413
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-37 Score=315.64 Aligned_cols=204 Identities=25% Similarity=0.321 Sum_probs=163.6
Q ss_pred EEEEEEEEEEcC------------------CCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEEC
Q psy10512 400 IMVQNVSFRYSD------------------DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKN 461 (629)
Q Consensus 400 l~~~~l~~~y~~------------------~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~ 461 (629)
|+++||++.|.. ....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~ 84 (264)
T PRK13546 5 VNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRN 84 (264)
T ss_pred EEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEC
Confidence 667777776642 12348999999999999999999999999999999999999999999998
Q ss_pred CceeEEeeccchhcccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 462 SHLRFARYHQHLHELLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 462 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
+. +.++.|.. .+....++.+++.. .+........+..+++.+++... .+.++.+|||||+|||+||+||+
T Consensus 85 g~--~~~~~~~~--~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LS~Gq~qrv~Laral~ 159 (264)
T PRK13546 85 GE--VSVIAISA--GLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEF-IYQPVKKYSSGMRAKLGFSINIT 159 (264)
T ss_pred CE--EeEEeccc--CCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-hcCCcccCCHHHHHHHHHHHHHh
Confidence 85 33444432 23344577766532 12111223345667888898754 45678999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETL 609 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 609 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||+|++|++|+++ +.|+++++....
T Consensus 160 ~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~~~~ 234 (264)
T PRK13546 160 VNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLK-DYGELDDVLPKY 234 (264)
T ss_pred hCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEE-EeCCHHHHHHHh
Confidence 999999999999999999999999998765 569999999999999999999999999997 468887776544
No 414
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.3e-37 Score=313.91 Aligned_cols=201 Identities=29% Similarity=0.377 Sum_probs=168.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------eeEEeec
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------LRFARYH 470 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------~~~~~~~ 470 (629)
|+++|+++.|+. . .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|++
T Consensus 1 i~i~~l~~~~~~-~-~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~ 78 (237)
T TIGR00968 1 IEIANISKRFGS-F-QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVF 78 (237)
T ss_pred CEEEEEEEEECC-e-eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEe
Confidence 478999999963 3 4899999999999999999999999999999999999999999988752 2467888
Q ss_pred cchhcccCCCCCHHHHHhhcC-----CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 471 QHLHELLDLDISPLDYMLQSF-----PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
|... +....++.+++.... ......+.+.++++.+++... .++++.+||+||+||++|||+|+.+|++||||
T Consensus 79 q~~~--~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (237)
T TIGR00968 79 QHYA--LFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGL-GDRYPNQLSGGQRQRVALARALAVEPQVLLLD 155 (237)
T ss_pred cChh--hccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhH-hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 7653 334557777654221 111234567889999999754 45677999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+|||+.++..+.+.|.++ +.|||++||+++++..+||++++|++|+++ +.|+.+++.
T Consensus 156 EP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 219 (237)
T TIGR00968 156 EPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE-QIGSPDEVY 219 (237)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE-EecCHHHHH
Confidence 999999999999999999865 568999999999999999999999999997 467766654
No 415
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=312.49 Aligned_cols=183 Identities=26% Similarity=0.378 Sum_probs=160.1
Q ss_pred eEEEEeEEEEeCC---------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCC
Q psy10512 87 DVKIANFSITFHG---------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASD 157 (629)
Q Consensus 87 ~i~i~nls~~y~~---------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~ 157 (629)
.++++||++.|.- ..+++||||+|++||++||||+||||||||-|+|.|++.|++|+|.+.+.. +.
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~--i~--- 78 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKD--IT--- 78 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcc--hh---
Confidence 6899999999952 369999999999999999999999999999999999999999999774321 00
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHH
Q psy10512 158 KSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGW 237 (629)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 237 (629)
.+......+++.++|+.+|+..+..++++++|||||
T Consensus 79 --------------------------------------------~~~~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQ 114 (268)
T COG4608 79 --------------------------------------------KLSKEERRERVLELLEKVGLPEEFLYRYPHELSGGQ 114 (268)
T ss_pred --------------------------------------------hcchhHHHHHHHHHHHHhCCCHHHhhcCCcccCchh
Confidence 000223456789999999999889999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
+||++|||||+.+|+++++|||||+||...+..+.++|.++ +.|.++||||+..+..+||||++|..|+|++.+..
T Consensus 115 rQRi~IARALal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~ 194 (268)
T COG4608 115 RQRIGIARALALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPT 194 (268)
T ss_pred hhhHHHHHHHhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCH
Confidence 99999999999999999999999999999988888877644 78999999999999999999999999999998776
Q ss_pred HHHHH
Q psy10512 314 YEAFC 318 (629)
Q Consensus 314 ~~~~~ 318 (629)
.+.|.
T Consensus 195 ~~~~~ 199 (268)
T COG4608 195 EEVFS 199 (268)
T ss_pred HHHhh
Confidence 55554
No 416
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.9e-38 Score=318.83 Aligned_cols=208 Identities=17% Similarity=0.238 Sum_probs=156.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC----CCCceEEEeecccCCCCCc--ch
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP----VPDHIDIFHLTREMPASDK--SA 160 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p----~~g~i~i~~~~~~~~~~~~--~~ 160 (629)
.|+++|++++| ++++|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|++.+.+.. +..... ..
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~--i~~~~~~~~~ 80 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKP--VAPCALRGRK 80 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCee--ccccccccce
Confidence 59999999999 66899999999999999999999999999999999999998 88988775432 111000 00
Q ss_pred hhhhhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCch--hhhcccCCCChHH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKE--MQQKKTKDFSGGW 237 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~--~~~~~~~~LSGGq 237 (629)
+.++. ++.. .+.+..+........... ......+.++.++++.+|+... ..++.+.+|||||
T Consensus 81 i~~v~-------------q~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq 145 (254)
T PRK10418 81 IATIM-------------QNPRSAFNPLHTMHTHARETCLA--LGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGM 145 (254)
T ss_pred EEEEe-------------cCCccccCccccHHHHHHHHHHH--cCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHH
Confidence 11111 1100 011111111111111011 1111234678889999999642 4688899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
+|||+|||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+|||+++++..+||++++|++|+++..+.
T Consensus 146 ~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~ 224 (254)
T PRK10418 146 LQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGD 224 (254)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999888654 6799999999999999999999999999987643
No 417
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=8.4e-38 Score=332.78 Aligned_cols=195 Identities=25% Similarity=0.309 Sum_probs=163.6
Q ss_pred EEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc---------------eeEEe
Q psy10512 404 NVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH---------------LRFAR 468 (629)
Q Consensus 404 ~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~---------------~~~~~ 468 (629)
||++.|++ . .+ ++||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..++|
T Consensus 4 ~l~~~~~~--~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGD--F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECC--E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 89999953 3 35 999999999999999999999999999999999999999988652 23678
Q ss_pred eccchhcccCCCCCHHHHHhhcCC---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEe
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFP---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 545 (629)
++|+.. +...+|+.+++..... .....+++.++++.+||.... ++++.+|||||||||+|||||+.+|++||||
T Consensus 80 v~q~~~--l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LSgGqkqRvalAraL~~~p~lllLD 156 (354)
T TIGR02142 80 VFQEAR--LFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLL-GRLPGRLSGGEKQRVAIGRALLSSPRLLLMD 156 (354)
T ss_pred EecCCc--cCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 888753 4445788887653221 112234678999999997644 5678999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 546 EPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 546 EPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 157 EPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 220 (354)
T TIGR02142 157 EPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVA-AAGPIAEVW 220 (354)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-EECCHHHHh
Confidence 999999999999999998765 468999999999999999999999999997 467776654
No 418
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=320.14 Aligned_cols=204 Identities=19% Similarity=0.258 Sum_probs=165.0
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~-------- 463 (629)
.++|+++|+++.|++ . .+|+++||+|++|++++|+|+||||||||+++|+|+++ |++|+|.+++.
T Consensus 22 ~~~l~~~~l~~~~~~-~-~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE-D-HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC-c-ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 468999999999963 3 48999999999999999999999999999999999997 69999988763
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc--C---CCh-hhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS--F---PEV-KDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~~-~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|+.. +.. .++.+++... . ... .....+.++++.+++.. .....++.+|||||||||
T Consensus 100 ~~~~~~~i~~v~q~~~--~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 100 VEELRTNVGMVFQKPN--PFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHHhhhEEEEecCCc--ccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 24788888753 222 4777766421 1 111 11234566677775421 123457789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||+|+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+..++.
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~-~g~~~~~~ 254 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNE-YDDTDKIF 254 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999999876 4689999999999999999999999999974 57766653
No 419
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-38 Score=319.05 Aligned_cols=213 Identities=20% Similarity=0.277 Sum_probs=157.5
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCC-Ccch
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPAS-DKSA 160 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~-~~~~ 160 (629)
.|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+| ++|++.+.+.. +... ...
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~--~~~~~~~~- 79 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGED--IYGNIDVA- 79 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEE--cccccchH-
Confidence 58999999999988999999999999999999999999999999999999886 47777665432 1100 000
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccC-hhhHHHHHHHHHHhCCCCc---hhhhcccCCCChH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDIS-ADTAEARAANILHGLGFTK---EMQQKKTKDFSGG 236 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGG 236 (629)
..+..+..+.++...+ +.+..+++ .......... .....+++.++++.+|+.. +..++++.+||||
T Consensus 80 --------~~~~~i~~~~q~~~~~-~~tv~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G 149 (249)
T PRK14253 80 --------DLRIKVGMVFQKPNPF-PMSIYENV-AYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGG 149 (249)
T ss_pred --------HHHhheeEEecCCCcC-cccHHHHH-HhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHH
Confidence 0001111111111111 11222222 1111111111 1223456777888888743 3467889999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 237 WRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 237 qrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+|||+++++..+||++++|++|+++..+.
T Consensus 150 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~ 227 (249)
T PRK14253 150 QQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDD 227 (249)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999998876 4799999999999999999999999999997653
No 420
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=7e-38 Score=310.84 Aligned_cols=207 Identities=19% Similarity=0.252 Sum_probs=155.5
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
++++|+++.|+. ++.|+||+|++|++++|+||||||||||+++|+|+.+|+.|++.+.+.. +..... .
T Consensus 1 ~~~~~l~~~~~~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~--~------ 68 (213)
T TIGR01277 1 LALDKVRYEYEH--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQS--HTGLAP--Y------ 68 (213)
T ss_pred CeEEeeeEEeCC--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEE--cccCCh--h------
Confidence 468999999974 5789999999999999999999999999999999999999998875432 111000 0
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
+..+..+.++...++..+..+++...+.. ........+.++.++++.+|+. +..++.+.+|||||+||++|||||
T Consensus 69 ---~~~i~~v~q~~~~~~~~t~~en~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral 143 (213)
T TIGR01277 69 ---QRPVSMLFQENNLFAHLTVRQNIGLGLHP-GLKLNAEQQEKVVDAAQQVGIA-DYLDRLPEQLSGGQRQRVALARCL 143 (213)
T ss_pred ---ccceEEEeccCccCCCCcHHHHHHhHhhc-cCCccHHHHHHHHHHHHHcCcH-HHhhCCcccCCHHHHHHHHHHHHH
Confidence 00000111111111112222332211111 0011122345678899999996 567899999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++++.+
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~ 211 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVS 211 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEec
Confidence 9999999999999999999999999888653 679999999999999999999999999998764
No 421
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-38 Score=324.43 Aligned_cols=213 Identities=16% Similarity=0.237 Sum_probs=159.4
Q ss_pred eEEEEeEEEEeCC---eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 87 DVKIANFSITFHG---CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~---~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
+|+++||+++|++ ..+|+|+||+|++|++++|+|+||||||||+++|+|+++|.+|+|.+.+.. +.......
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--i~~~~~~~--- 78 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGEL--LTAENVWN--- 78 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEE--CCcCCHHH---
Confidence 5999999999974 359999999999999999999999999999999999999999999875432 11100000
Q ss_pred hhhchHHHHHHHHHHHHHh-ccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLV-ACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
.+..+..+.++.. .....+..+++ ...............+++..+++.+|+. +..++++.+|||||+|||+
T Consensus 79 ------~~~~i~~v~q~~~~~~~~~tv~eni-~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~ 150 (277)
T PRK13642 79 ------LRRKIGMVFQNPDNQFVGATVEDDV-AFGMENQGIPREEMIKRVDEALLAVNML-DFKTREPARLSGGQKQRVA 150 (277)
T ss_pred ------HhcceEEEEECHHHhhccCCHHHHH-HhhHHHcCCCHHHHHHHHHHHHHHCCCH-hHhhCCcccCCHHHHHHHH
Confidence 0000100111100 01111222222 1111111122333446788999999996 5788999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++. .||+|++|++|++++.+..
T Consensus 151 lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~ 224 (277)
T PRK13642 151 VAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAP 224 (277)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999988644 689999999999997 6999999999999876543
No 422
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.4e-38 Score=314.62 Aligned_cols=203 Identities=26% Similarity=0.393 Sum_probs=149.1
Q ss_pred eEEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 87 DVKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 87 ~i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
.|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|++.+.+.. +......
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~--~~~~~~~----- 74 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTD--IRQLDPA----- 74 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEE--hHHCCHH-----
Confidence 3889999999975 569999999999999999999999999999999999999999998775421 1100000
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcc-----------cCCC
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKK-----------TKDF 233 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~-----------~~~L 233 (629)
..+..+....+... ..+ .+..++..... . ......+.++++.+++. +..++. +.+|
T Consensus 75 ----~~~~~i~~~~q~~~-~~~-~tv~e~l~~~~--~----~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~~~L 141 (220)
T cd03245 75 ----DLRRNIGYVPQDVT-LFY-GTLRDNITLGA--P----LADDERILRAAELAGVT-DFVNKHPNGLDLQIGERGRGL 141 (220)
T ss_pred ----HHHhhEEEeCCCCc-ccc-chHHHHhhcCC--C----CCCHHHHHHHHHHcCcH-HHHHhccccccceecCCCccC
Confidence 00000000011100 001 11111111110 0 01123556778888885 444543 4699
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC--CEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 234 SGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYK--RILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 234 SGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~~--~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||||||++|||||+.+|++|||||||++||+.++.++++.|+++. .|||+||||++++ .+||++++|++|+++.+
T Consensus 142 SgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~ 219 (220)
T cd03245 142 SGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVAD 219 (220)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEeec
Confidence 9999999999999999999999999999999999999999998763 6999999999987 69999999999998754
No 423
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-38 Score=313.70 Aligned_cols=208 Identities=24% Similarity=0.330 Sum_probs=152.5
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
+.+ ||+|+|+++.+ |+||+|++ ++++|+||||||||||+++|+|+++|++|++.+.+.. +....... ..
T Consensus 2 ~~~-~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~-----~~ 70 (214)
T cd03297 2 LCV-DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTV--LFDSRKKI-----NL 70 (214)
T ss_pred cee-eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEe--cccccchh-----hh
Confidence 344 99999999876 99999999 9999999999999999999999999999998775432 11000000 00
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
...+..+..+.+....+ +..+..++...... .........++.++++.+|+. ...++++.+||||||||++|||||
T Consensus 71 ~~~~~~i~~~~q~~~~~-~~~t~~~~l~~~~~--~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la~al 146 (214)
T cd03297 71 PPQQRKIGLVFQQYALF-PHLNVRENLAFGLK--RKRNREDRISVDELLDLLGLD-HLLNRYPAQLSGGEKQRVALARAL 146 (214)
T ss_pred hhHhhcEEEEecCCccC-CCCCHHHHHHHHHh--hCCHHHHHHHHHHHHHHcCCH-hHhhcCcccCCHHHHHHHHHHHHH
Confidence 00000011111111111 11122222221111 111223345788899999996 567889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 213 (214)
T cd03297 147 AAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYI 213 (214)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEec
Confidence 9999999999999999999999999988654 67999999999999999999999999999754
No 424
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.5e-38 Score=304.68 Aligned_cols=174 Identities=31% Similarity=0.500 Sum_probs=144.1
Q ss_pred EEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCCC
Q psy10512 401 MVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLD 480 (629)
Q Consensus 401 ~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~ 480 (629)
+++|+++.|+. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++... ..
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~-~~------------ 65 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDL-AS------------ 65 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEC-Cc------------
Confidence 47899999964 3489999999999999999999999999999999999999999999886421 00
Q ss_pred CCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHH
Q psy10512 481 ISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALA 560 (629)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~ 560 (629)
...... .... ..+.++++.+|+.... .+++.+|||||+||++|||||+.+|++|||||||++||+.+++.+.
T Consensus 66 ~~~~~~-~~~i------~~~~q~l~~~gl~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~ 137 (180)
T cd03214 66 LSPKEL-ARKI------AYVPQALELLGLAHLA-DRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELL 137 (180)
T ss_pred CCHHHH-HHHH------hHHHHHHHHcCCHhHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHH
Confidence 011000 0000 0111288899997544 4577999999999999999999999999999999999999999999
Q ss_pred HHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 561 DAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 561 ~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
+.|.++ +.|+|++|||++++..+||++++|++|+++.
T Consensus 138 ~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 178 (180)
T cd03214 138 ELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVA 178 (180)
T ss_pred HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999775 4589999999999999999999999999863
No 425
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.8e-38 Score=312.75 Aligned_cols=192 Identities=23% Similarity=0.355 Sum_probs=157.8
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCC
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~ 479 (629)
+.+++++++|+. ..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++... ...... ..+..
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~-~~~~~~--~~~~~ 97 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVS-SLLGLG--GGFNP 97 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEc-hhhccc--ccCCC
Confidence 778999999964 3589999999999999999999999999999999999999999999987531 111111 12334
Q ss_pred CCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHH
Q psy10512 480 DISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDME 554 (629)
Q Consensus 480 ~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~ 554 (629)
..|+.+++... .......+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||+|||+.
T Consensus 98 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~ 176 (224)
T cd03220 98 ELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFI-DLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAA 176 (224)
T ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 56777765321 11112234567889999997544 5678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 555 TIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 555 ~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
++..+.+.|.++ +.|||+||||.+++..+||++++|++|+++.
T Consensus 177 ~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 177 FQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999998775 4689999999999999999999999999864
No 426
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=320.12 Aligned_cols=221 Identities=22% Similarity=0.283 Sum_probs=159.7
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--C---CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV--P---VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~--p---~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++.+|+|+||+|.+|++++|+||||||||||+++|+|+.. | ++|+|.+.+........+....
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 84 (252)
T PRK14255 5 IITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQL 84 (252)
T ss_pred eEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHh
Confidence 5899999999998889999999999999999999999999999999999864 4 3688776543211000000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccC-hhhHHHHHHHHHHhCCCC---chhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDIS-ADTAEARAANILHGLGFT---KEMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGq 237 (629)
+..+..+.++...+ +. +..++........... .+.....+.++++.+++. .+..++++.+|||||
T Consensus 85 ---------~~~i~~~~q~~~~~-~~-tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq 153 (252)
T PRK14255 85 ---------RKQVGMVFQQPNPF-PF-SIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQ 153 (252)
T ss_pred ---------cCeEEEEECCCccC-CC-cHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHH
Confidence 00000001110111 11 2222222111111111 122234566778888763 235678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHH
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYE 315 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~ 315 (629)
+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++.++.+.+
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14255 154 QQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998766 4799999999999999999999999999999887766
Q ss_pred HHH
Q psy10512 316 AFC 318 (629)
Q Consensus 316 ~~~ 318 (629)
.+.
T Consensus 234 ~~~ 236 (252)
T PRK14255 234 MFL 236 (252)
T ss_pred Hhc
Confidence 553
No 427
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-38 Score=324.71 Aligned_cols=216 Identities=21% Similarity=0.238 Sum_probs=158.4
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|++..+|+|+||+|.+|++++|+|||||||||||++|+|+.. |+.|+|.+.+.. +.......
T Consensus 39 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~--i~~~~~~~- 115 (286)
T PRK14275 39 HVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGED--IYGKFTDE- 115 (286)
T ss_pred EEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEE--hhhcccch-
Confidence 5999999999998889999999999999999999999999999999999854 478888765422 11000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCC---chhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFT---KEMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +. +..++.......... .......++.++++.+|+. .+..++++.+|||||
T Consensus 116 ------~~~~~~i~~v~q~~~l~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 116 ------VLLRKKIGMVFQKPNPF-PK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQ 187 (286)
T ss_pred ------HHhhhcEEEECCCCCCC-cc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHH
Confidence 00000111111111111 12 222222221111111 1122345677888888874 245678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++..+..
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~ 265 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPT 265 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999876 46999999999999999999999999999877543
No 428
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.9e-38 Score=335.15 Aligned_cols=216 Identities=21% Similarity=0.272 Sum_probs=162.2
Q ss_pred EeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecc--cCCCCCcchhhhhhhch
Q psy10512 91 ANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTR--EMPASDKSALTCVMEVD 168 (629)
Q Consensus 91 ~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~--~~~~~~~~~~~~~~~~~ 168 (629)
.++.+.||...+|+|+||+|++||+++|+||||||||||+++|+|++.|++|+|.+.+... ++...+...+.
T Consensus 28 ~~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~------ 101 (382)
T TIGR03415 28 EEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLR------ 101 (382)
T ss_pred HHHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHH------
Confidence 3556788888999999999999999999999999999999999999999999998864321 11110000000
Q ss_pred HHH-HHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 169 EER-VRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 169 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..+ ..+.++++....++..+..+++ .+...+..+...+...++.++++.+||. +..++++.+|||||||||+|||||
T Consensus 102 ~~r~~~i~~vfQ~~~l~p~~Tv~eNi-~~~~~~~g~~~~~~~~~a~e~le~vgL~-~~~~~~~~~LSgGq~QRV~LARAL 179 (382)
T TIGR03415 102 RLRTHRVSMVFQKFALMPWLTVEENV-AFGLEMQGMPEAERRKRVDEQLELVGLA-QWADKKPGELSGGMQQRVGLARAF 179 (382)
T ss_pred HHhcCCEEEEECCCcCCCCCcHHHHH-HHHHHhcCCCHHHHHHHHHHHHHHcCCc-hhhcCChhhCCHHHHHHHHHHHHH
Confidence 000 0111112222222222333333 2222222334445567889999999996 578999999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcH
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNY 314 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~ 314 (629)
+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++..+.+.
T Consensus 180 a~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ 250 (382)
T TIGR03415 180 AMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPE 250 (382)
T ss_pred hcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 9999999999999999999999999988653 689999999999999999999999999999876543
No 429
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.1e-38 Score=315.94 Aligned_cols=205 Identities=21% Similarity=0.265 Sum_probs=153.2
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||++.|+++++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|++.+.+.. +......
T Consensus 7 ~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~------- 77 (225)
T PRK10247 7 LLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGED--ISTLKPE------- 77 (225)
T ss_pred eEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEE--cCcCCHH-------
Confidence 5999999999998899999999999999999999999999999999999999999999875432 1110000
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..+.+... +.+. +..++......+.. ......++.++++.+|+.....++++.+|||||+|||+||||
T Consensus 78 --~~~~~i~~~~q~~~-l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lara 151 (225)
T PRK10247 78 --IYRQQVSYCAQTPT-LFGD-TVYDNLIFPWQIRN--QQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRN 151 (225)
T ss_pred --HHHhccEEEecccc-cccc-cHHHHHHhHHhhcC--CChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHH
Confidence 00001111111111 1111 22222221111111 111235677899999996456789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEc--CCeE
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLD--KRKL 307 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~--~G~i 307 (629)
|+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++. .||++++|+ .|+|
T Consensus 152 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~ 217 (225)
T PRK10247 152 LQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEM 217 (225)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchH
Confidence 99999999999999999999999999988764 679999999999996 699999996 4444
No 430
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.2e-37 Score=314.53 Aligned_cols=201 Identities=28% Similarity=0.350 Sum_probs=158.6
Q ss_pred EEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 400 IMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 400 l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
|+++|+++.|+.. ..++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999642 234899999999999999999999999999999999999999999998872 2478
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHH---------c--CCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGR---------Y--GLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~--gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
|++|... +. ..++.+++...... .....+...++. + ++.... ..++.+|||||+|||+|||||+
T Consensus 81 ~~~q~~~--~~-~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~la~al~ 155 (238)
T cd03249 81 LVSQEPV--LF-DGTIAENIRYGKPD-ATDEEVEEAAKKANIHDFIMSLPDGYDTLV-GERGSQLSGGQKQRIAIARALL 155 (238)
T ss_pred EECCchh--hh-hhhHHHHhhccCCC-CCHHHHHHHHHHcChHHHHHhhccccceee-ccCCccCCHHHHHHHHHHHHHh
Confidence 8888753 22 24777776432211 111222233332 2 333222 3456899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
.+|++|||||||+|||+.+++.+.+.|.++ +.+||++|||++++. +||++++|++|+++ +.|+.+++..
T Consensus 156 ~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~-~~d~v~~l~~G~i~-~~~~~~~~~~ 226 (238)
T cd03249 156 RNPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR-NADLIAVLQNGQVV-EQGTHDELMA 226 (238)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh-hCCEEEEEECCEEE-EeCCHHHHhh
Confidence 999999999999999999999999999876 458999999999997 89999999999996 4677666543
No 431
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=8.1e-38 Score=314.05 Aligned_cols=190 Identities=23% Similarity=0.343 Sum_probs=157.0
Q ss_pred EeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC----CccEEEECCc---------eeEEeeccchhcccCCCCC
Q psy10512 416 IYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP----SVGMVRKNSH---------LRFARYHQHLHELLDLDIS 482 (629)
Q Consensus 416 il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p----~~G~i~~~~~---------~~~~~~~q~~~~~~~~~~~ 482 (629)
+|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.+++. ..++|++|+....+....+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 47899999999999999999999999999999999999 8999998773 2578888875323444456
Q ss_pred HHHHHhh-----cCCChhhHHHHHHHHHHcCCCC--cccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHH
Q psy10512 483 PLDYMLQ-----SFPEVKDREEMRKIIGRYGLTG--RQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMET 555 (629)
Q Consensus 483 ~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~--~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~ 555 (629)
+.+++.. ........+.+.++++.+|+.. ...++++.+|||||||||+|||||+.+|+||||||||+|||+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~ 160 (230)
T TIGR02770 81 MGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVN 160 (230)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHH
Confidence 6554321 1111123456788999999973 23456789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 556 IDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 556 ~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+..+.+.|.++ +.|||++|||++++..+||++++|++|++. ..|+.+++.
T Consensus 161 ~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 214 (230)
T TIGR02770 161 QARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIV-ERGTVKEIF 214 (230)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 99999988764 468999999999999999999999999997 467776654
No 432
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-37 Score=319.00 Aligned_cols=205 Identities=20% Similarity=0.182 Sum_probs=166.3
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc-------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH------- 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~------- 463 (629)
++++|+++|++++|+. ..+|+++||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 17 ~~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 17 DHSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred CCceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 3568999999999963 3489999999999999999999999999999999999863 6899988762
Q ss_pred ------eeEEeeccchhcccCCCCCHHHHHhhcC--C--ChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 ------LRFARYHQHLHELLDLDISPLDYMLQSF--P--EVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|+.. +.. .++.+++.... . .....+.+..+++.+++.. ....+++.+|||||+|||+
T Consensus 95 ~~~~~~~~i~~v~q~~~--l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 171 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPN--PFP-KSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLC 171 (274)
T ss_pred hhHHHhhcEEEEccCCc--ccc-ccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHH
Confidence 24778888753 222 36777654311 0 1112344567788888731 2234577999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEe---------CCEEEEec
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICE---------NGKVTKWE 599 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~---------~G~i~~~~ 599 (629)
|||||+.+|++|||||||+|||+.+++.+.+.|.++ +.|||+||||++++..+||++++|+ +|+++ ..
T Consensus 172 LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~-~~ 250 (274)
T PRK14265 172 IARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV-EF 250 (274)
T ss_pred HHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE-Ee
Confidence 999999999999999999999999999999999887 4689999999999999999999998 79997 46
Q ss_pred CCHHHHH
Q psy10512 600 GNILDYK 606 (629)
Q Consensus 600 g~~~~~~ 606 (629)
|+..++.
T Consensus 251 g~~~~~~ 257 (274)
T PRK14265 251 SPTEQMF 257 (274)
T ss_pred CCHHHHH
Confidence 8876653
No 433
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.7e-37 Score=315.21 Aligned_cols=201 Identities=21% Similarity=0.319 Sum_probs=158.7
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCC--CCCccEEEECCc------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDL--TPSVGMVRKNSH------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~--~p~~G~i~~~~~------------~ 464 (629)
+|+++||++.|++ . .+|+++||+|++|++++|+||||||||||+++|+|++ +|++|+|.+++. .
T Consensus 1 ~i~~~nl~~~~~~-~-~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (248)
T PRK09580 1 MLSIKDLHVSVED-K-AILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGE 78 (248)
T ss_pred CeEEEEEEEEeCC-e-eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhc
Confidence 4789999999963 3 4899999999999999999999999999999999995 699999998763 1
Q ss_pred eEEeeccchhcccCCCCCHHHHHhh------cCCC------hhhHHHHHHHHHHcCCCCcccccCcC-cCChhHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQ------SFPE------VKDREEMRKIIGRYGLTGRQQVCPIR-QLSDGQKCRVVF 531 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~-~LSgGqkqrv~l 531 (629)
.++|++|.... ....+...+... .... ......+.++++.+++......+++. +|||||||||+|
T Consensus 79 ~i~~~~q~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 79 GIFMAFQYPVE--IPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred ceEEEecCchh--ccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 36777776431 112222222110 0000 01134567788999996433445554 799999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhh-cCEEEEEeCCEEEEecCCHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQV-AEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~~ 604 (629)
||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+ ||+|++|++|+++ +.|+++.
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~-~~g~~~~ 232 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIV-KSGDFTL 232 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEE-EeCCHHH
Confidence 99999999999999999999999999999988765 46899999999999887 8999999999997 5787663
No 434
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=315.30 Aligned_cols=202 Identities=18% Similarity=0.258 Sum_probs=165.2
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH---------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~---------- 463 (629)
+|+++|+++.|+. ..+|+++||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 6899999999963 3489999999999999999999999999999999999986 5999988762
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhcC-----CC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHHH
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQSF-----PE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~lA 532 (629)
..++|++|... +. ..++.+++.... .. ....+.+.++++.+++.. .....++.+|||||+|||+||
T Consensus 81 ~~~~i~~~~q~~~--~~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 157 (249)
T PRK14253 81 LRIKVGMVFQKPN--PF-PMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIA 157 (249)
T ss_pred HHhheeEEecCCC--cC-cccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHH
Confidence 13678887753 22 257777664221 11 112345667788888743 123457789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 158 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 232 (249)
T PRK14253 158 RTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVE-HDDTQVIF 232 (249)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999877 4689999999999999999999999999974 67766653
No 435
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-38 Score=321.47 Aligned_cols=224 Identities=19% Similarity=0.267 Sum_probs=159.6
Q ss_pred cCCCceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCC
Q psy10512 81 VHPKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPA 155 (629)
Q Consensus 81 ~~~~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~ 155 (629)
..|...+|+++|+++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+..| ..|++.+.+. ++..
T Consensus 14 ~~~~~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~--~l~~ 91 (274)
T PRK14265 14 INPDHSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDR--NIYD 91 (274)
T ss_pred cCCCCceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCE--eccc
Confidence 34445579999999999988899999999999999999999999999999999999764 4677766442 2110
Q ss_pred CCcchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCC---chhhhcccCC
Q psy10512 156 SDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFT---KEMQQKKTKD 232 (629)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~---~~~~~~~~~~ 232 (629)
..... ...+..+..+.++...+ +. +..++........... ......+.++++.+++. .+..++++.+
T Consensus 92 ~~~~~-------~~~~~~i~~v~q~~~l~-~~-tv~~nl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~ 161 (274)
T PRK14265 92 SQINS-------VKLRRQVGMVFQRPNPF-PK-SIYENIAFAPRANGYK-GNLDELVEDSLRRAAIWEEVKDKLKEKGTA 161 (274)
T ss_pred ccchh-------HHHhhcEEEEccCCccc-cc-cHHHHHHhHHHhcCch-HHHHHHHHHHHHHcccchhhHHHhcCCccc
Confidence 00000 00000011111111111 11 1222211111111111 12234466778888763 2346788999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEc-------
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLD------- 303 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~------- 303 (629)
|||||+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|+
T Consensus 162 LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~ 241 (274)
T PRK14265 162 LSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYG 241 (274)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeccccccc
Confidence 9999999999999999999999999999999999999999999876 5799999999999999999999997
Q ss_pred --CCeEEEEcCcHHH
Q psy10512 304 --KRKLKYYGGNYEA 316 (629)
Q Consensus 304 --~G~i~~~~g~~~~ 316 (629)
+|++++++.+.+.
T Consensus 242 ~~~G~~~~~g~~~~~ 256 (274)
T PRK14265 242 KRRGKLVEFSPTEQM 256 (274)
T ss_pred ccCceEEEeCCHHHH
Confidence 7999987655443
No 436
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=318.25 Aligned_cols=203 Identities=19% Similarity=0.200 Sum_probs=165.3
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~--------- 463 (629)
++|+++||++.|+. . .+|+|+||+|++||+++|+||||||||||+++|+|++. |++|+|.+++.
T Consensus 9 ~~l~i~~v~~~~~~-~-~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 9 TVLRTENLNVYYGS-F-LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred eEEEEeeeEEEECC-E-EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 58999999999963 3 48999999999999999999999999999999999986 48999998763
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC--C--ChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF--P--EVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVVFA 532 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~lA 532 (629)
..++|++|+.. +.. .++.+++.... . .....+.+..+++.+++.. .....++.+|||||+|||+||
T Consensus 87 ~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~la 163 (264)
T PRK14243 87 VEVRRRIGMVFQKPN--PFP-KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIA 163 (264)
T ss_pred HHHhhhEEEEccCCc--ccc-ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHH
Confidence 13788888753 222 37777664321 1 1122345667788888742 123457789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEe---------CCEEEEecCC
Q psy10512 533 YLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICE---------NGKVTKWEGN 601 (629)
Q Consensus 533 ral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~---------~G~i~~~~g~ 601 (629)
|||+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++..+||+|++|+ +|+++ +.|+
T Consensus 164 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~-~~~~ 242 (264)
T PRK14243 164 RAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV-EFDR 242 (264)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE-EeCC
Confidence 9999999999999999999999999999999876 3689999999999999999999998 79997 5677
Q ss_pred HHHHH
Q psy10512 602 ILDYK 606 (629)
Q Consensus 602 ~~~~~ 606 (629)
.+++.
T Consensus 243 ~~~~~ 247 (264)
T PRK14243 243 TEKIF 247 (264)
T ss_pred HHHHH
Confidence 76663
No 437
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=315.98 Aligned_cols=203 Identities=19% Similarity=0.271 Sum_probs=163.9
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC--C---CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT--P---SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~--p---~~G~i~~~~~-------- 463 (629)
+++|+++||++.|+. ..+|+++||+|.+||+++|+||||||||||+++|+|+++ | ++|+|.+++.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 80 (252)
T PRK14255 3 KKIITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNED 80 (252)
T ss_pred cceEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEccccccc
Confidence 468999999999963 348999999999999999999999999999999999975 5 5899988763
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc--C---CCh-hhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS--F---PEV-KDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~~-~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|+.. +.. .++.+++... . ... ...+.+..+++.+++.. .....++.+|||||+|||
T Consensus 81 ~~~~~~~i~~~~q~~~--~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 81 VVQLRKQVGMVFQQPN--PFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HHHhcCeEEEEECCCc--cCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHH
Confidence 24778888753 222 4777665421 1 111 11345667788887642 223457799999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+..+.
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 234 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIE-FADTKQM 234 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999999999999999876 4689999999999999999999999999985 4555443
No 438
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=5.4e-38 Score=319.73 Aligned_cols=214 Identities=20% Similarity=0.284 Sum_probs=156.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCC--CCCCCCceEEEeeccc-CCCCCcchhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNR--EVPVPDHIDIFHLTRE-MPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~--~~p~~g~i~i~~~~~~-~~~~~~~~~~~ 163 (629)
+|+++||++.|+++.+|+|+||+|++|+++||+|+||||||||+++|+|+ +.|+.|++.+.+.... ..........
T Consensus 7 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~- 85 (252)
T CHL00131 7 ILEIKNLHASVNENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLG- 85 (252)
T ss_pred eEEEEeEEEEeCCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheee-
Confidence 59999999999988899999999999999999999999999999999998 5788999887543211 0000000000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhh-------hhccChhhHHHHHHHHHHhCCCCchhhhcccC-CCCh
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDR-------LDDISADTAEARAANILHGLGFTKEMQQKKTK-DFSG 235 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~-~LSG 235 (629)
+..+ .+....+ +..+..++...... ...........++.++|+.+|+.....++++. .|||
T Consensus 86 ~~~~----------~q~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSg 154 (252)
T CHL00131 86 IFLA----------FQYPIEI-PGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSG 154 (252)
T ss_pred EEEE----------ecccccc-ccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCH
Confidence 0000 0000000 01111111111100 00111122345678899999996445677777 5999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhh-cceeEEEcCCeEEEEc
Q psy10512 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGV-CTNIIHLDKRKLKYYG 311 (629)
Q Consensus 236 GqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~-~d~ii~l~~G~i~~~~ 311 (629)
||+|||+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+ ||++++|++|++++.+
T Consensus 155 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~ 234 (252)
T CHL00131 155 GEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTG 234 (252)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEec
Confidence 9999999999999999999999999999999999999988765 68999999999999887 9999999999998765
Q ss_pred C
Q psy10512 312 G 312 (629)
Q Consensus 312 g 312 (629)
.
T Consensus 235 ~ 235 (252)
T CHL00131 235 D 235 (252)
T ss_pred C
Confidence 3
No 439
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.6e-37 Score=309.87 Aligned_cols=193 Identities=27% Similarity=0.385 Sum_probs=160.5
Q ss_pred eEEEEEEEEEEcCC--CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-------------
Q psy10512 399 VIMVQNVSFRYSDD--GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------- 463 (629)
Q Consensus 399 ~l~~~~l~~~y~~~--~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------- 463 (629)
+|+++|+++.|+++ ...+|+++||++.+|++++|+|+||||||||+++|+|+++|++|+|.+++.
T Consensus 1 ~l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (220)
T TIGR02982 1 VISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQL 80 (220)
T ss_pred CEEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHH
Confidence 37899999999642 135899999999999999999999999999999999999999999998763
Q ss_pred -eeEEeeccchhcccCCCCCHHHHHhhc--C-C---ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 464 -LRFARYHQHLHELLDLDISPLDYMLQS--F-P---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 464 -~~~~~~~q~~~~~~~~~~~~~~~~~~~--~-~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
..++|++|+.. +....++.+++... + . .......+.++++.+|+.... .+++.+|||||+||++|||+|+
T Consensus 81 ~~~i~~~~q~~~--~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qrv~laral~ 157 (220)
T TIGR02982 81 RRNIGYIFQAHN--LLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHL-DYYPHNLSGGQKQRVAIARALV 157 (220)
T ss_pred HhheEEEcCChh--hcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHh
Confidence 24788888753 33446777655321 1 1 112245678899999997544 4577999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++.+ .+||+|++|++|++
T Consensus 158 ~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 158 HRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 999999999999999999999999998765 57899999999965 79999999999986
No 440
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.5e-38 Score=308.93 Aligned_cols=187 Identities=23% Similarity=0.361 Sum_probs=157.6
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce----------eEEe
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------RFAR 468 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------~~~~ 468 (629)
+|+++|+++.|+. ..+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++.. .++|
T Consensus 1 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~ 78 (204)
T PRK13538 1 MLEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLY 78 (204)
T ss_pred CeEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEE
Confidence 4789999999963 348999999999999999999999999999999999999999999987632 3667
Q ss_pred eccchhcccCCCCCHHHHHhhcC--CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSF--PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
++|... +....++.+++.... ......+.+.++++.+|+.+.. ++++.+|||||+|||+|||||+.+|++|||||
T Consensus 79 ~~~~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllDE 155 (204)
T PRK13538 79 LGHQPG--IKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFE-DVPVRQLSAGQQRRVALARLWLTRAPLWILDE 155 (204)
T ss_pred eCCccc--cCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHh-hCChhhcCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 766532 344567877764321 1112446788899999997543 56789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEE
Q psy10512 547 PTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWIC 590 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l 590 (629)
||++||+.+++.+.+.|.++ +.|||+||||.+++..+.+|++++
T Consensus 156 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 156 PFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999876 578999999999999988888876
No 441
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-38 Score=320.18 Aligned_cols=195 Identities=26% Similarity=0.339 Sum_probs=152.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++||++.|+++.+|+++||+|++|++++|+|||||||||||++|+|+.+|++|++.+... ..+.++.+
T Consensus 4 ~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~---------~~i~~v~q 74 (251)
T PRK09544 4 LVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGK---------LRIGYVPQ 74 (251)
T ss_pred EEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCc---------cCEEEecc
Confidence 599999999999888999999999999999999999999999999999999999998876421 00001100
Q ss_pred chHHHHHHHHHHHHHhccCC-hhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACED-DESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALAR 245 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 245 (629)
.. ..... ..+...+... .......++.++++.+|+. +..++++.+|||||+|||+|||
T Consensus 75 ~~-------------~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgGq~qrv~lar 133 (251)
T PRK09544 75 KL-------------YLDTTLPLTVNRFLRL-------RPGTKKEDILPALKRVQAG-HLIDAPMQKLSGGETQRVLLAR 133 (251)
T ss_pred cc-------------ccccccChhHHHHHhc-------cccccHHHHHHHHHHcCCh-HHHhCChhhCCHHHHHHHHHHH
Confidence 00 00000 0011111100 0011134577899999996 5678899999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 246 aL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||+.+|++|||||||++||+.++.++++.|.++ +.|||+||||++++..+||+|++|++ +++..+.
T Consensus 134 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~ 203 (251)
T PRK09544 134 ALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGT 203 (251)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCC
Confidence 999999999999999999999999999988653 68999999999999999999999975 6776643
No 442
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=318.91 Aligned_cols=226 Identities=21% Similarity=0.278 Sum_probs=161.7
Q ss_pred CCCceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCC
Q psy10512 82 HPKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPAS 156 (629)
Q Consensus 82 ~~~~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~ 156 (629)
++.+..|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+..| ++|++.+.+........
T Consensus 11 ~~~~~~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred cCCCceEEEEEEEEEECCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 4455679999999999988999999999999999999999999999999999999875 56777765422111000
Q ss_pred CcchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccCh-hhHHHHHHHHHHhCCCCc---hhhhcccCC
Q psy10512 157 DKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISA-DTAEARAANILHGLGFTK---EMQQKKTKD 232 (629)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~L~~lgl~~---~~~~~~~~~ 232 (629)
.... ...+..+....++...+ +. +..++............ ...++++.++++.+++.. +..++.+.+
T Consensus 91 ~~~~-------~~~~~~i~~~~q~~~~~-~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~ 161 (265)
T PRK14252 91 EVDP-------IEVRMRISMVFQKPNPF-PK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFN 161 (265)
T ss_pred ccCH-------HHHhccEEEEccCCcCC-cc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCccc
Confidence 0000 00000010111111111 11 22222221111111111 122456777888887742 356788999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEE
Q psy10512 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYY 310 (629)
Q Consensus 233 LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~ 310 (629)
|||||+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|++|+++.+
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~ 241 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEF 241 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999988765 47999999999999999999999999999988
Q ss_pred cCcHHH
Q psy10512 311 GGNYEA 316 (629)
Q Consensus 311 ~g~~~~ 316 (629)
+.+.+.
T Consensus 242 g~~~~~ 247 (265)
T PRK14252 242 GATDTI 247 (265)
T ss_pred CCHHHH
Confidence 665443
No 443
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=347.51 Aligned_cols=195 Identities=24% Similarity=0.341 Sum_probs=166.8
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------ee
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LR 465 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~ 465 (629)
|+|+++|+++.|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..
T Consensus 3 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 3 PYLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred ceEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 58999999999953 34899999999999999999999999999999999999999999998762 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhcC--------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQSF--------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
++|++|... +....++.+++.... ......+++.++++.+|+.... ++++.+|||||||||+|||||+.
T Consensus 81 i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGq~qrv~laral~~ 157 (501)
T PRK11288 81 VAIIYQELH--LVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDP-DTPLKYLSIGQRQMVEIAKALAR 157 (501)
T ss_pred EEEEEechh--ccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCc-CCchhhCCHHHHHHHHHHHHHHh
Confidence 788888753 345567877765321 0112245678899999997543 56789999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~ 220 (501)
T PRK11288 158 NARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVA 220 (501)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999998865 4689999999999999999999999999974
No 444
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-37 Score=315.42 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=163.6
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc-----------
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH----------- 463 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~----------- 463 (629)
-+++||++.|++ ..+|+++||+|.+|++++|+|+||||||||+++|+|+.+ |++|+|.+++.
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 468999999953 348999999999999999999999999999999999986 47999998762
Q ss_pred --eeEEeeccchhcccCCCCCHHHHHhhc--CCC-----hhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHHHH
Q psy10512 464 --LRFARYHQHLHELLDLDISPLDYMLQS--FPE-----VKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|... +.. .++.+++... ... ....+.+.++++.+|+... ...+++.+|||||||||+|
T Consensus 84 ~~~~i~~v~q~~~--~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 160 (251)
T PRK14244 84 LRAKVGMVFQKPN--PFP-KSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCI 160 (251)
T ss_pred HhhhEEEEecCcc--ccc-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHH
Confidence 13778888753 222 3666665321 111 1223456788999999641 2345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+.+++.
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 236 (251)
T PRK14244 161 ARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIV-EYNTTQEIF 236 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999999999999999876 468999999999999999999999999997 467766653
No 445
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=333.32 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=166.3
Q ss_pred CCeEEEEEEEEEEcCCC-CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhc
Q psy10512 397 PPVIMVQNVSFRYSDDG-PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHE 475 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~-~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~ 475 (629)
.++++++||++.|+.+. ..+|+++||+|.+|+++||+|||||||||||++|+|+++|++|+|.+++.... .... .
T Consensus 19 ~~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~~--i~~~--~ 94 (549)
T PRK13545 19 KPFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAAL--IAIS--S 94 (549)
T ss_pred cceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEeee--EEec--c
Confidence 46899999999996532 34899999999999999999999999999999999999999999999875421 1111 1
Q ss_pred ccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q psy10512 476 LLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNH 550 (629)
Q Consensus 476 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~ 550 (629)
.+....++.+++.. ........+.+..+++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||+|
T Consensus 95 ~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~l-d~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsg 173 (549)
T PRK13545 95 GLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFI-YQPVKTYSSGMKSRLGFAISVHINPDILVIDEALSV 173 (549)
T ss_pred ccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHh-hCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccc
Confidence 22334577776532 111112234566789999997544 567899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 551 LDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 551 LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+++++..
T Consensus 174 LD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~-~G~~~el~~ 232 (549)
T PRK13545 174 GDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKE-YGDIKEVVD 232 (549)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999776 5689999999999999999999999999974 577655443
No 446
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-37 Score=314.33 Aligned_cols=203 Identities=21% Similarity=0.252 Sum_probs=165.5
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC-----ccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS-----VGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~-----~G~i~~~~~--------- 463 (629)
++|+++|+++.|+. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+++.
T Consensus 3 ~~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 3 PKIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred ceEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 57899999999963 34899999999999999999999999999999999999997 699987652
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC-----CC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF-----PE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +. ..++.+++.... .. ....+.+..+++.+++.. ....+++.+|||||+|||+
T Consensus 81 ~~~~~~i~~v~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~ 157 (251)
T PRK14249 81 VNLRKRVGMVFQQPN--PF-PKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLC 157 (251)
T ss_pred HHhhceEEEEecCCc--cC-cCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 24788888753 22 237777664211 11 112345666788888742 1234577999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
|||||+.+|++|||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|+++. .|+.++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 234 (251)
T PRK14249 158 IARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVE-YGRTGEIF 234 (251)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEE-eCCHHHHH
Confidence 999999999999999999999999999999999876 4689999999999999999999999999974 57776653
No 447
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-37 Score=315.70 Aligned_cols=203 Identities=24% Similarity=0.284 Sum_probs=165.8
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCC-----ccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPS-----VGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~-----~G~i~~~~~--------- 463 (629)
++|+++|+++.|+. . .+|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.+++.
T Consensus 6 ~~l~~~nl~~~~~~-~-~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT-Q-KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC-e-eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 37999999999953 2 4899999999999999999999999999999999999985 798887652
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhc-----C-CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQS-----F-PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +.. .++.+++... . +.....+.+.++++.+++.. ....+++.+|||||+|||+
T Consensus 84 ~~~~~~i~~~~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~ 160 (261)
T PRK14258 84 NRLRRQVSMVHPKPN--LFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLC 160 (261)
T ss_pred HHhhccEEEEecCCc--cCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHH
Confidence 13667777643 222 5777765421 1 11122345778899998743 1235677899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeC-----CEEEEecCC
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICEN-----GKVTKWEGN 601 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~-----G~i~~~~g~ 601 (629)
|||+|+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++ |+++ ..|+
T Consensus 161 laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~ 239 (261)
T PRK14258 161 IARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV-EFGL 239 (261)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE-EeCC
Confidence 999999999999999999999999999999998763 57899999999999999999999999 9997 4688
Q ss_pred HHHHH
Q psy10512 602 ILDYK 606 (629)
Q Consensus 602 ~~~~~ 606 (629)
++++.
T Consensus 240 ~~~~~ 244 (261)
T PRK14258 240 TKKIF 244 (261)
T ss_pred HHHHH
Confidence 77664
No 448
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.7e-38 Score=309.97 Aligned_cols=199 Identities=21% Similarity=0.250 Sum_probs=151.0
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVME 166 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~ 166 (629)
+|+++|++++|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+... .... .
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~--~~~~-~------- 70 (204)
T PRK13538 1 MLEARNLACERDERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPI--RRQR-D------- 70 (204)
T ss_pred CeEEEEEEEEECCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEc--ccch-H-------
Confidence 37899999999998999999999999999999999999999999999999999999988754321 1000 0
Q ss_pred chHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHH
Q psy10512 167 VDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARA 246 (629)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 246 (629)
..+..+..+.++.... +..+..++......... .....++.++++.+|+. +..++++.+||||||||++||||
T Consensus 71 --~~~~~~~~~~~~~~~~-~~~tv~e~l~~~~~~~~---~~~~~~~~~~l~~~gl~-~~~~~~~~~LS~G~~qrl~la~a 143 (204)
T PRK13538 71 --EYHQDLLYLGHQPGIK-TELTALENLRFYQRLHG---PGDDEALWEALAQVGLA-GFEDVPVRQLSAGQQRRVALARL 143 (204)
T ss_pred --HhhhheEEeCCccccC-cCCcHHHHHHHHHHhcC---ccHHHHHHHHHHHcCCH-HHhhCChhhcCHHHHHHHHHHHH
Confidence 0000010011111111 11122222222211111 12345788899999996 56789999999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEE
Q psy10512 247 LYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHL 302 (629)
Q Consensus 247 L~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l 302 (629)
|+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+.+|++++
T Consensus 144 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 144 WLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999998765 689999999999999988888776
No 449
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-37 Score=317.77 Aligned_cols=204 Identities=23% Similarity=0.246 Sum_probs=167.0
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
.++|+++|+++.|++ . .+|+++||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++.
T Consensus 23 ~~~l~~~nl~~~~~~-~-~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD-K-QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC-e-eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 458999999999963 3 489999999999999999999999999999999999884 8999988652
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc--CCC----hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS--FPE----VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +.. .++.+++... ... ....+.+.++++.+++.. ...+.++.+|||||+|||
T Consensus 101 ~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 177 (272)
T PRK14236 101 VAELRRRVGMVFQRPN--PFP-KSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRL 177 (272)
T ss_pred HHHHhccEEEEecCCc--cCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHH
Confidence 24678887643 222 3777766422 111 112345778888888853 123456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.+||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 178 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 255 (272)
T PRK14236 178 VIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLV-EYGDTDTLF 255 (272)
T ss_pred HHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-ecCCHHHHh
Confidence 9999999999999999999999999999999999876 468999999999999999999999999997 467776653
No 450
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.4e-37 Score=310.47 Aligned_cols=192 Identities=25% Similarity=0.341 Sum_probs=158.6
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|+.....+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (221)
T cd03244 3 IEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISI 82 (221)
T ss_pred EEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEE
Confidence 6899999999643334899999999999999999999999999999999999999999998763 24788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCccc----------ccCcCcCChhHHHHHHHHHHHccC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQ----------VCPIRQLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~~~LSgGqkqrv~lAral~~~ 538 (629)
++|... + ...++.+++... .. ...+++.++++.+++..... ..++..|||||+|||+|||||+.+
T Consensus 83 ~~q~~~--l-~~~tv~enl~~~-~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 83 IPQDPV--L-FSGTIRSNLDPF-GE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred ECCCCc--c-ccchHHHHhCcC-CC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 888754 2 234777776421 11 22345566677776643321 246789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
|++|||||||++||+.++..+.+.|.++ +.|||++|||.+++.. ||++++|++|+++.
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~ 217 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-SDRILVLDKGRVVE 217 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-CCEEEEEECCeEEe
Confidence 9999999999999999999999999876 4689999999999975 99999999999974
No 451
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-37 Score=312.16 Aligned_cols=200 Identities=25% Similarity=0.340 Sum_probs=159.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|+++.|+.+. .+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|
T Consensus 1 l~~~~l~~~~~~~~-~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPGR-PVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCCC-ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 46899999995333 3899999999999999999999999999999999999999999998763 23788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcC-----------CCCcccccCcCcCChhHHHHHHHHHHHcc
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYG-----------LTGRQQVCPIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~~LSgGqkqrv~lAral~~ 537 (629)
++|... .+ ..|+.+++...... .....+...+..++ +... ...++.+|||||||||+|||||+.
T Consensus 80 ~~q~~~-~~--~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~~~~~-~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 80 VPQDTV-LF--NDTIGYNIRYGRPD-ATDEEVIEAAKAAQIHDKIMRFPDGYDTI-VGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred ECCCCh-hh--cchHHHHHhhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccch-hhcCCCcCCHHHHHHHHHHHHHhc
Confidence 888753 22 35777776543221 11222333333333 3222 234568999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||.+++.. ||++++|++|+++ ..|+.+++.+
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~-~d~~~~l~~g~i~-~~~~~~~~~~ 224 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN-ADKIIVLKDGRIV-ERGTHEELLA 224 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-CCEEEEEECCEEE-eeCCHHHHhh
Confidence 99999999999999999999999999776 4689999999999965 9999999999997 4677766544
No 452
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1e-37 Score=307.98 Aligned_cols=183 Identities=26% Similarity=0.370 Sum_probs=152.5
Q ss_pred EEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce---------------eE
Q psy10512 402 VQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL---------------RF 466 (629)
Q Consensus 402 ~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~---------------~~ 466 (629)
++||++.|++ . .+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.. .+
T Consensus 1 i~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD-K-IILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC-E-EEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999963 3 48999999999999999999999999999999999999999999887632 46
Q ss_pred EeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|++|... +....++.+++... .......+.+.++++.+|+.... ++++.+|||||+||++|||||+.+|++
T Consensus 79 ~~~~q~~~--~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qr~~laral~~~p~l 155 (206)
T TIGR03608 79 GYLFQNFA--LIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKL-KQKIYELSGGEQQRVALARAILKDPPL 155 (206)
T ss_pred eEEecchh--hccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhh-cCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 77877653 33456777765321 11112345678899999997544 457799999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEE
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWIC 590 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l 590 (629)
|||||||++||+.+++.+.+.|+++ +.+||++|||++++ .+||++++|
T Consensus 156 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 156 ILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 9999999999999999999999876 46899999999977 589999875
No 453
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.3e-38 Score=333.72 Aligned_cols=209 Identities=22% Similarity=0.253 Sum_probs=155.1
Q ss_pred eEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchHHH
Q psy10512 92 NFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEER 171 (629)
Q Consensus 92 nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (629)
||+++|++..+ |+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +....... .....+
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~--i~~~~~~~-----~~~~~~ 74 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRT--LFDSRKGI-----FLPPEK 74 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE--CccCcccc-----ccchhh
Confidence 89999998764 9999999999999999999999999999999999999998875432 11000000 000000
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHccCC
Q psy10512 172 VRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKP 251 (629)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 251 (629)
..+..+.+....++..+..+++ .+... .........++.++++.+||. +..++++.+|||||||||+|||||+.+|
T Consensus 75 ~~i~~v~q~~~l~~~~tv~enl-~~~~~--~~~~~~~~~~~~~~l~~~gL~-~~~~~~~~~LSgGqkqRvalAraL~~~p 150 (354)
T TIGR02142 75 RRIGYVFQEARLFPHLSVRGNL-RYGMK--RARPSERRISFERVIELLGIG-HLLGRLPGRLSGGEKQRVAIGRALLSSP 150 (354)
T ss_pred CCeEEEecCCccCCCCcHHHHH-HHHhh--ccChhHHHHHHHHHHHHcCCh-hHhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 0011111111111122222222 21111 111223345788999999996 5789999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 252 HLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 252 ~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++..+.+
T Consensus 151 ~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 216 (354)
T TIGR02142 151 RLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPI 216 (354)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCH
Confidence 999999999999999999999888654 67999999999999999999999999999877543
No 454
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=318.46 Aligned_cols=219 Identities=21% Similarity=0.271 Sum_probs=158.6
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC-----CCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPV-----PDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~-----~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|++++|++..+|+|+||+|++|++++|+|+|||||||||++|+|+++|. .|++.+.+. ++.......
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~--~i~~~~~~~- 83 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQ--NIYERRVNL- 83 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCE--Ehhccccch-
Confidence 599999999999888999999999999999999999999999999999999875 566655432 211000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +. +..++.......... ...+...++.++++.+++.. ...++++.+|||||
T Consensus 84 ------~~~~~~i~~~~q~~~l~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 84 ------NRLRRQVSMVHPKPNLF-PM-SVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQ 155 (261)
T ss_pred ------HHhhccEEEEecCCccC-cc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHH
Confidence 00000000001110111 11 222222211111111 12233456788999998742 35678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhh----cCCEEEEEecCHHHHHhhcceeEEEcC-----CeEE
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKT----YKRILVIISHSQDFLNGVCTNIIHLDK-----RKLK 308 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~----~~~tvIivsHd~~~l~~~~d~ii~l~~-----G~i~ 308 (629)
+||++|||||+.+|+||||||||++||+.++.++.+.|++ .+.|||+||||++++..+||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 9999999999999999999999999999999999998875 368999999999999999999999999 9998
Q ss_pred EEcCcHHH
Q psy10512 309 YYGGNYEA 316 (629)
Q Consensus 309 ~~~g~~~~ 316 (629)
..+.+.+.
T Consensus 236 ~~~~~~~~ 243 (261)
T PRK14258 236 EFGLTKKI 243 (261)
T ss_pred EeCCHHHH
Confidence 77554443
No 455
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-38 Score=309.76 Aligned_cols=181 Identities=25% Similarity=0.370 Sum_probs=158.2
Q ss_pred CeEEEEEEEEEEcCCC-------CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeec
Q psy10512 398 PVIMVQNVSFRYSDDG-------PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYH 470 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~-------~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~ 470 (629)
++++++||++.|+... ..+++||||+|++||++||||.||||||||-|+|+|+++|++|+|.+.|....
T Consensus 3 ~ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~---- 78 (268)
T COG4608 3 PLLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDIT---- 78 (268)
T ss_pred ceEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchh----
Confidence 5799999999996432 25899999999999999999999999999999999999999999999875300
Q ss_pred cchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q psy10512 471 QHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNH 550 (629)
Q Consensus 471 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~ 550 (629)
... .....+++.++|+.+|+......+.+++|||||+||++|||||+.+|+++++||||++
T Consensus 79 -------~~~------------~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQrQRi~IARALal~P~liV~DEpvSa 139 (268)
T COG4608 79 -------KLS------------KEERRERVLELLEKVGLPEEFLYRYPHELSGGQRQRIGIARALALNPKLIVADEPVSA 139 (268)
T ss_pred -------hcc------------hhHHHHHHHHHHHHhCCCHHHhhcCCcccCchhhhhHHHHHHHhhCCcEEEecCchhh
Confidence 000 2234567899999999987777778899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCH
Q psy10512 551 LDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602 (629)
Q Consensus 551 LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 602 (629)
||...+.++.++|.++ +.+.++||||+..+..+||||+||..|+|++. |+.
T Consensus 140 LDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~-g~~ 194 (268)
T COG4608 140 LDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEI-GPT 194 (268)
T ss_pred cchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEe-cCH
Confidence 9999999999988765 56899999999999999999999999999864 443
No 456
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=9.4e-38 Score=302.22 Aligned_cols=165 Identities=24% Similarity=0.393 Sum_probs=138.8
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------------ 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------------ 464 (629)
.++|+++|++++| +|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++..
T Consensus 2 ~~~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (182)
T cd03215 2 EPVLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRA 75 (182)
T ss_pred CcEEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhC
Confidence 3579999999988 7999999999999999999999999999999999999999999987631
Q ss_pred eEEeeccchh-cccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEE
Q psy10512 465 RFARYHQHLH-ELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLL 543 (629)
Q Consensus 465 ~~~~~~q~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 543 (629)
.++|++|+.. ..+....++.+++.... .|||||+|||+|||||+.+|++||
T Consensus 76 ~i~~~~q~~~~~~~~~~~t~~e~l~~~~----------------------------~LS~G~~qrl~la~al~~~p~lll 127 (182)
T cd03215 76 GIAYVPEDRKREGLVLDLSVAENIALSS----------------------------LLSGGNQQKVVLARWLARDPRVLI 127 (182)
T ss_pred CeEEecCCcccCcccCCCcHHHHHHHHh----------------------------hcCHHHHHHHHHHHHHccCCCEEE
Confidence 3556665431 11223334444332100 099999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 544 LDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 544 LDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
|||||++||+.+++.+.+.|.++ +.|+|++|||++++..+||++++|++|++
T Consensus 128 lDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 128 LDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred ECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999876 46899999999999999999999999974
No 457
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=9.4e-38 Score=347.61 Aligned_cols=200 Identities=22% Similarity=0.292 Sum_probs=165.5
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------eEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-----------RFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-----------~~~ 467 (629)
+|+++|+++.|+. . .+|+++||+|.+|++++|+||||||||||+|+|+|+++|++|+|.+++.. .++
T Consensus 3 ~l~~~~l~~~~~~-~-~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD-T-KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC-e-eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 6899999999963 3 38999999999999999999999999999999999999999999876521 256
Q ss_pred eeccchhccc-C-----CCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 468 RYHQHLHELL-D-----LDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 468 ~~~q~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
|++|.....+ . ...++.+++... ....+++.++++.+|+.+. .++++.+|||||||||+||+||+.+|++
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~la~al~~~p~l 156 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDE---VKDPARCEQLAQQFGITAL-LDRRFKYLSTGETRKTLLCQALMSEPDL 156 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccc---hhHHHHHHHHHHHcCCHhh-hhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 7776532111 0 123444443211 1234568899999999754 4568899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ +.|+++++
T Consensus 157 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 222 (490)
T PRK10938 157 LILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLA-ETGEREEI 222 (490)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-EeCCHHHH
Confidence 9999999999999999999999876 468999999999999999999999999997 46777665
No 458
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.2e-38 Score=311.37 Aligned_cols=201 Identities=21% Similarity=0.230 Sum_probs=153.4
Q ss_pred ceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 85 SRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 85 ~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
+.+|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|++.+.+... .....
T Consensus 9 ~~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i--~~~~~------ 80 (214)
T PRK13543 9 PPLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTA--TRGDR------ 80 (214)
T ss_pred cceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEc--cchhh------
Confidence 3469999999999988899999999999999999999999999999999999999999988754321 10000
Q ss_pred hhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALA 244 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LA 244 (629)
+..+..+.+....+ +..+..++......+.. ...+..+.++++.+|+. +..++++.+|||||||||+||
T Consensus 81 ------~~~i~~~~q~~~~~-~~~t~~e~l~~~~~~~~---~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrv~la 149 (214)
T PRK13543 81 ------SRFMAYLGHLPGLK-ADLSTLENLHFLCGLHG---RRAKQMPGSALAIVGLA-GYEDTLVRQLSAGQKKRLALA 149 (214)
T ss_pred ------hhceEEeecCcccc-cCCcHHHHHHHHHHhcC---CcHHHHHHHHHHHcCCh-hhccCChhhCCHHHHHHHHHH
Confidence 00000011110111 11122222211111111 12345677899999997 557889999999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcC
Q psy10512 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDK 304 (629)
Q Consensus 245 raL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~ 304 (629)
|||+.+|+||||||||++||+.++.++.+.|.++ +.|+|++|||++++..+||++++|+.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 150 RLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999999999988765 78999999999999999999999863
No 459
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.5e-37 Score=346.86 Aligned_cols=201 Identities=20% Similarity=0.293 Sum_probs=167.9
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC--CccEEEECCc------------e
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP--SVGMVRKNSH------------L 464 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~------------~ 464 (629)
+|+++|+++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+++. .
T Consensus 1 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 1 LLEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred CEEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 4789999999953 3489999999999999999999999999999999999997 7999998762 2
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcC---------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSF---------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLA 535 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 535 (629)
.++|++|... +....++.+++.... ......+++.++++.+|+.....++++.+|||||||||+|||||
T Consensus 79 ~i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al 156 (500)
T TIGR02633 79 GIVIIHQELT--LVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKAL 156 (500)
T ss_pred CEEEEeeccc--cCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHH
Confidence 4889998753 344567777764321 01122356788999999975444467899999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHH
Q psy10512 536 WQAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILD 604 (629)
Q Consensus 536 ~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 604 (629)
+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .++..+
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~ 227 (500)
T TIGR02633 157 NKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVA-TKDMST 227 (500)
T ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEee-ecCccc
Confidence 9999999999999999999999999998765 5689999999999999999999999999974 455443
No 460
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=334.88 Aligned_cols=201 Identities=19% Similarity=0.296 Sum_probs=158.6
Q ss_pred eEEEEeEEEEeCC---eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 87 DVKIANFSITFHG---CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 87 ~i~i~nls~~y~~---~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
+++++||++.|++ +.+|+|+||+|++|+++||+|||||||||||++|+|+.+|++|++.+.+....+..
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~~i~~-------- 92 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAALIAI-------- 92 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEeeeEEe--------
Confidence 5999999999987 46999999999999999999999999999999999999999999987542110000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIAL 243 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~L 243 (629)
. .. ..+..+..+.......+.........+++.++++.+|+. +..++++.+|||||||||+|
T Consensus 93 ----~------------~~-l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~-~~ld~~~~~LSGGQrQRVaL 154 (549)
T PRK13545 93 ----S------------SG-LNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIG-KFIYQPVKTYSSGMKSRLGF 154 (549)
T ss_pred ----c------------cc-cCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCCh-hHhhCCcccCCHHHHHHHHH
Confidence 0 00 001111111111111111222333445677899999996 56789999999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 244 ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 244 AraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++.++.+
T Consensus 155 ArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~ 227 (549)
T PRK13545 155 AISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDI 227 (549)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999988665 68999999999999999999999999999987644
No 461
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=317.61 Aligned_cols=218 Identities=19% Similarity=0.303 Sum_probs=158.9
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++|+++.|++..+|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|++.+.+. .+.......
T Consensus 7 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~--~i~~~~~~~- 83 (259)
T PRK14260 7 AIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQ--NIYDPRINI- 83 (259)
T ss_pred eEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCE--eccccccch-
Confidence 59999999999988899999999999999999999999999999999999875 3677776542 211000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhc-cChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDD-ISADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.++...+ +. +..++......... ........++.++++.+|+.. +..++++.+|||||
T Consensus 84 ------~~~~~~i~~v~q~~~l~-~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 84 ------NRLRRQIGMVFQRPNPF-PM-SIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQ 155 (259)
T ss_pred ------HhhhhheEEEecccccC-Cc-cHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHH
Confidence 00000111111111111 12 22222221111111 122233456778899998842 35678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEc-----CCeEEEE
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLD-----KRKLKYY 310 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~-----~G~i~~~ 310 (629)
+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|+ +|+++..
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999998765 4799999999999999999999997 5999987
Q ss_pred cCcHH
Q psy10512 311 GGNYE 315 (629)
Q Consensus 311 ~g~~~ 315 (629)
+.+.+
T Consensus 236 ~~~~~ 240 (259)
T PRK14260 236 GVTTQ 240 (259)
T ss_pred CCHHH
Confidence 65443
No 462
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-38 Score=322.44 Aligned_cols=210 Identities=20% Similarity=0.324 Sum_probs=155.8
Q ss_pred eEEEEeEEEEeC-CeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFH-GCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~-~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
.|+++|++++|+ ++.+|+|+||+|++|+++||+|||||||||||++|+|+++|++|++.+.+........ ...+.++.
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~-~~~i~~v~ 84 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQ-KNLVAYVP 84 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhc-cceEEEec
Confidence 499999999995 5789999999999999999999999999999999999999999998875432100000 00000110
Q ss_pred hchHHHHHHHHHHHHHhc-cCChhHHHHHHHH--Hhhhh--ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHH
Q psy10512 166 EVDEERVRLEKLAEQLVA-CEDDESQEQLMDI--YDRLD--DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMR 240 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~--~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqR 240 (629)
++... ........++... +.... .........++.++++.+|+. +..++++.+||||||||
T Consensus 85 -------------q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr 150 (272)
T PRK15056 85 -------------QSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMV-EFRHRQIGELSGGQKKR 150 (272)
T ss_pred -------------cccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCCh-hHhcCCcccCCHHHHHH
Confidence 00000 0000011111100 00000 011122345677899999996 56789999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 241 IALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 241 v~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
++|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+++++ +|+++..+.
T Consensus 151 v~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~ 224 (272)
T PRK15056 151 VFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGP 224 (272)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecC
Confidence 99999999999999999999999999999999998765 679999999999999999999877 899987654
No 463
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-37 Score=311.04 Aligned_cols=209 Identities=26% Similarity=0.368 Sum_probs=154.5
Q ss_pred EEEEeEEEEeCC----eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhh
Q psy10512 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTC 163 (629)
Q Consensus 88 i~i~nls~~y~~----~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~ 163 (629)
|+++|+++.|++ +.+|+|+||++++|++++|+||||||||||+++|+|+++|++|++.+.+... ........
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~--~~~~~~~~-- 77 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQEL--YGASEKEL-- 77 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEh--HhcCHhHH--
Confidence 789999999975 6799999999999999999999999999999999999999999988754321 10000000
Q ss_pred hhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhh-ccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHH
Q psy10512 164 VMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLD-DISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIA 242 (629)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~ 242 (629)
...+..+....+....+... +..++........ .....+...++.++++.+|+. +..++.+.+||||||||++
T Consensus 78 ----~~~~~~i~~~~q~~~~~~~~-t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qrv~ 151 (220)
T TIGR02982 78 ----VQLRRNIGYIFQAHNLLGFL-TARQNVQMALELQPNLSYQEARERARAMLEAVGLG-DHLDYYPHNLSGGQKQRVA 151 (220)
T ss_pred ----HHHHhheEEEcCChhhcCCC-CHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCh-hhhhcChhhCCHHHHHHHH
Confidence 00000111111111111111 2222222221111 123334556788999999996 5678899999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CCEEEEEecCHHHHHhhcceeEEEcCCeE
Q psy10512 243 LARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY----KRILVIISHSQDFLNGVCTNIIHLDKRKL 307 (629)
Q Consensus 243 LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~----~~tvIivsHd~~~l~~~~d~ii~l~~G~i 307 (629)
|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||+++. .+||+|++|++|++
T Consensus 152 laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 152 IARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 999999999999999999999999999998888654 68999999999965 69999999999976
No 464
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1e-37 Score=312.07 Aligned_cols=211 Identities=24% Similarity=0.293 Sum_probs=152.0
Q ss_pred eEEEEeEEEEeCC-------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecc--cCCCCC
Q psy10512 87 DVKIANFSITFHG-------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTR--EMPASD 157 (629)
Q Consensus 87 ~i~i~nls~~y~~-------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~--~~~~~~ 157 (629)
+|+++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|+.|++.+.+.+. ++...+
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 3789999999963 4799999999999999999999999999999999999999999988753211 111000
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHH
Q psy10512 158 KSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGW 237 (629)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGq 237 (629)
...... ..+..+..+.+.....+. .+..++................+++.++++.+|+.....++++.+|||||
T Consensus 81 ~~~~~~-----~~~~~i~~~~q~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~ 154 (224)
T TIGR02324 81 PREVLE-----VRRKTIGYVSQFLRVIPR-VSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGE 154 (224)
T ss_pred HHHHHH-----HHhcceEEEecccccCCC-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHH
Confidence 000000 000001111111111111 12222221111111122233456788899999997545678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLD 303 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~ 303 (629)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+++.+.
T Consensus 155 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 155 QQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 99999999999999999999999999999999999988764 6799999999999999999999764
No 465
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=316.84 Aligned_cols=215 Identities=20% Similarity=0.319 Sum_probs=156.9
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcchhh
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSALT 162 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~~~ 162 (629)
-+++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+.. |+.|++.+.+.. +.......
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~--i~~~~~~~-- 81 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID--VYSVDTNV-- 81 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe--hHhcccch--
Confidence 468999999998899999999999999999999999999999999999976 357888765422 11000000
Q ss_pred hhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc--ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 163 CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI--SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
...+..+..+.+....+ +.+..+++ ......... ........+.++++.+|+.. ...++.+.+|||||
T Consensus 82 -----~~~~~~i~~v~q~~~~~-~~tv~~ni-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq 154 (251)
T PRK14244 82 -----VLLRAKVGMVFQKPNPF-PKSIYDNV-AYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQ 154 (251)
T ss_pred -----HHHhhhEEEEecCcccc-cCCHHHHH-HHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHH
Confidence 00000111111111111 11222222 211111111 11233456778999999963 24577899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
||||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++..+..
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (251)
T PRK14244 155 QQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTT 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999988765 57999999999999999999999999999876543
No 466
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-37 Score=314.61 Aligned_cols=203 Identities=21% Similarity=0.249 Sum_probs=166.4
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc---------
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH--------- 463 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~--------- 463 (629)
++|+++|+++.|++ ..+|+++||+|.+||+++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 47899999999963 3489999999999999999999999999999999999985 4899998753
Q ss_pred ----eeEEeeccchhcccCCCCCHHHHHhhcC------CChhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHHHHH
Q psy10512 464 ----LRFARYHQHLHELLDLDISPLDYMLQSF------PEVKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKCRVV 530 (629)
Q Consensus 464 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 530 (629)
..++|++|... +. ..++.+++.... +.....+.+.++++.+|+.. .....++.+|||||+|||+
T Consensus 84 ~~~~~~i~~v~q~~~--l~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 160 (259)
T PRK14260 84 NRLRRQIGMVFQRPN--PF-PMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLC 160 (259)
T ss_pred HhhhhheEEEecccc--cC-CccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHH
Confidence 14778888753 22 267777764321 11122345678889998842 2234577899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEe-----CCEEEEecCCHH
Q psy10512 531 FAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICE-----NGKVTKWEGNIL 603 (629)
Q Consensus 531 lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~-----~G~i~~~~g~~~ 603 (629)
|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|+ +|+++ ..|+..
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~~ 239 (259)
T PRK14260 161 IARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMV-EFGVTT 239 (259)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEE-EeCCHH
Confidence 999999999999999999999999999999999876 3689999999999999999999998 59997 467777
Q ss_pred HHH
Q psy10512 604 DYK 606 (629)
Q Consensus 604 ~~~ 606 (629)
++.
T Consensus 240 ~~~ 242 (259)
T PRK14260 240 QIF 242 (259)
T ss_pred HHh
Confidence 653
No 467
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=6.7e-38 Score=309.27 Aligned_cols=203 Identities=26% Similarity=0.386 Sum_probs=148.1
Q ss_pred EEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhchH
Q psy10512 90 IANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDE 169 (629)
Q Consensus 90 i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~~~ 169 (629)
++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+++|+.|++.+.+.. +........ ...
T Consensus 1 i~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~~-----~~~ 73 (206)
T TIGR03608 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKE--TPPLNSKKA-----SKF 73 (206)
T ss_pred CcceEEEECCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEE--ccccchhhH-----HHH
Confidence 4799999998899999999999999999999999999999999999999999998775432 110000000 000
Q ss_pred HHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHHcc
Q psy10512 170 ERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYV 249 (629)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 249 (629)
.+..+....+....++.. +..++.................++.++++.+|+. +..++++.+|||||+||++|||||+.
T Consensus 74 ~~~~i~~~~q~~~~~~~~-t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~lS~G~~qr~~laral~~ 151 (206)
T TIGR03608 74 RREKLGYLFQNFALIENE-TVEENLDLGLKYKKLSKKEKREKKKEALEKVGLN-LKLKQKIYELSGGEQQRVALARAILK 151 (206)
T ss_pred HHhCeeEEecchhhccCC-cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCch-hhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 000011111111111111 2222222211111222334456788999999996 56788999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEE
Q psy10512 250 KPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHL 302 (629)
Q Consensus 250 ~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l 302 (629)
+|++|||||||++||+.++.++.+.|+++ +.|||+|||+++++ .+||++++|
T Consensus 152 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 152 DPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 99999999999999999999999998765 67999999999987 489999875
No 468
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-37 Score=322.29 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=168.5
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~-------- 463 (629)
..+|+++|++++|.++...+|+|+||+|++|+++||+||||||||||+++|+|+.+ |++|+|.++|.
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 35899999999996433458999999999999999999999999999999999986 57999987653
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc--CCChhh----HHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS--FPEVKD----REEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv 529 (629)
..++|++|.+. .+..|+.+++... +..... .+.+..+++.+++... ....++.+|||||||||
T Consensus 158 ~~~lr~~i~~v~q~~~---~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl 234 (329)
T PRK14257 158 SLELRTRIGMVFQKPT---PFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRL 234 (329)
T ss_pred hHhhhccEEEEecCCc---cCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHH
Confidence 24788888754 2346887776521 111111 2235778888887421 23456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|+||||||||++||+.+...+.+.|.++ +.|||+|||+++++..+||+|++|++|+|++ .|++.++.
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e-~g~~~~l~ 312 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEE-AGETKTIF 312 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999999999876 4699999999999999999999999999975 68887754
No 469
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2e-37 Score=304.73 Aligned_cols=185 Identities=26% Similarity=0.376 Sum_probs=157.2
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce----------eEEee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------RFARY 469 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------~~~~~ 469 (629)
|+++||++.|+. ..+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 78 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYL 78 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEe
Confidence 478999999963 348999999999999999999999999999999999999999999987632 46777
Q ss_pred ccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q psy10512 470 HQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~ 549 (629)
+|... +....++.+++...... ...+.+.++++.+|+.+.. ++++.+||||||||++|||||+.+|++|||||||+
T Consensus 79 ~q~~~--~~~~~tv~e~l~~~~~~-~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~ 154 (201)
T cd03231 79 GHAPG--IKTTLSVLENLRFWHAD-HSDEQVEEALARVGLNGFE-DRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTT 154 (201)
T ss_pred ccccc--cCCCcCHHHHHHhhccc-ccHHHHHHHHHHcCChhhh-cCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 77642 33456787776432221 2456788999999997644 56789999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEE
Q psy10512 550 HLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWIC 590 (629)
Q Consensus 550 ~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l 590 (629)
|||+.+++.+.+.|.++ +.|+|+||||...+..+|++++++
T Consensus 155 ~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 155 ALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999765 578999999999999999999886
No 470
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=317.82 Aligned_cols=217 Identities=18% Similarity=0.277 Sum_probs=156.6
Q ss_pred eeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcch
Q psy10512 86 RDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSA 160 (629)
Q Consensus 86 ~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~ 160 (629)
++|+++|++++|++.++|+|+||+|++|++++|+||||||||||+++|+|++. |++|++.+.+.. +.......
T Consensus 9 ~~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~--i~~~~~~~ 86 (264)
T PRK14243 9 TVLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKN--LYAPDVDP 86 (264)
T ss_pred eEEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEE--ccccccCh
Confidence 36999999999998899999999999999999999999999999999999876 367887765422 11000000
Q ss_pred hhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 161 LTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
. ..+..+..+.+....+ +. +..++........... ....+++..+++.+++.. ...++.+.+|||||
T Consensus 87 ~-------~~~~~i~~v~q~~~~~-~~-tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq 156 (264)
T PRK14243 87 V-------EVRRRIGMVFQKPNPF-PK-SIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQ 156 (264)
T ss_pred H-------HHhhhEEEEccCCccc-cc-cHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHH
Confidence 0 0000011111111111 11 2222221111111111 123345667788888742 24577899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEc---------CCe
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLD---------KRK 306 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~---------~G~ 306 (629)
+|||+|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||+||||++++..+||++++|+ +|+
T Consensus 157 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~ 236 (264)
T PRK14243 157 QQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGY 236 (264)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCce
Confidence 99999999999999999999999999999999999998766 4799999999999999999999998 799
Q ss_pred EEEEcCcH
Q psy10512 307 LKYYGGNY 314 (629)
Q Consensus 307 i~~~~g~~ 314 (629)
+++.+...
T Consensus 237 i~~~~~~~ 244 (264)
T PRK14243 237 LVEFDRTE 244 (264)
T ss_pred EEEeCCHH
Confidence 99775443
No 471
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.3e-37 Score=312.41 Aligned_cols=182 Identities=28% Similarity=0.345 Sum_probs=152.0
Q ss_pred eeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------eEEeeccchhcccCCCCCHHHHHhhc
Q psy10512 417 YRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------RFARYHQHLHELLDLDISPLDYMLQS 490 (629)
Q Consensus 417 l~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------~~~~~~q~~~~~~~~~~~~~~~~~~~ 490 (629)
|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++.. ..+|++|... +....++.+++...
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~--l~~~~tv~e~l~~~ 78 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYS--LLPWLTVRENIALA 78 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcc--cCCCCCHHHHHHHH
Confidence 578999999999999999999999999999999999999999998742 2467787653 34456787775432
Q ss_pred ----CCC---hhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q psy10512 491 ----FPE---VKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAI 563 (629)
Q Consensus 491 ----~~~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l 563 (629)
... ....+.+.++++.+|+... .++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l 157 (230)
T TIGR01184 79 VDRVLPDLSKSERRAIVEEHIALVGLTEA-ADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEEL 157 (230)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHcCCHHH-HcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHH
Confidence 111 1223457889999999754 35678999999999999999999999999999999999999999999998
Q ss_pred hhc----CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCH
Q psy10512 564 NDF----EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602 (629)
Q Consensus 564 ~~~----~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 602 (629)
.++ +.|||+||||++++..+||+|++|++|+++. .|+.
T Consensus 158 ~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~ 199 (230)
T TIGR01184 158 MQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAAN-IGQI 199 (230)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEec-ccCc
Confidence 764 5689999999999999999999999999974 4543
No 472
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-37 Score=320.24 Aligned_cols=208 Identities=20% Similarity=0.232 Sum_probs=168.7
Q ss_pred CCCCCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC-----CCccEEEECCc----
Q psy10512 393 GKIPPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT-----PSVGMVRKNSH---- 463 (629)
Q Consensus 393 ~~~~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~-----p~~G~i~~~~~---- 463 (629)
+...+++|.++||++.|+. . .+|+++||+|.+|++++|+|+|||||||||++|+|+++ |++|+|.+++.
T Consensus 39 ~~~~~~~l~i~nl~~~~~~-~-~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~ 116 (305)
T PRK14264 39 EFDGDAKLSVEDLDVYYGD-D-HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQ 116 (305)
T ss_pred ccCCCceEEEEEEEEEeCC-e-eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 3445668999999999964 3 48999999999999999999999999999999999986 68999998762
Q ss_pred ---------eeEEeeccchhcccCCCCCHHHHHhhcCC------------------ChhhHHHHHHHHHHcCCCC---cc
Q psy10512 464 ---------LRFARYHQHLHELLDLDISPLDYMLQSFP------------------EVKDREEMRKIIGRYGLTG---RQ 513 (629)
Q Consensus 464 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~~gl~~---~~ 513 (629)
..++|++|... +. ..++.+++..... .....+.+..+++.+++.. ..
T Consensus 117 ~~~~~~~~~~~i~~v~q~~~--l~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 193 (305)
T PRK14264 117 DGVNLVELRKRVGMVFQSPN--PF-PKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDR 193 (305)
T ss_pred ccccHHHHhhceEEEccCCc--cc-cccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHH
Confidence 24778888753 22 2477776542110 0112455778899998842 12
Q ss_pred cccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEE-EEE
Q psy10512 514 QVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEI-WIC 590 (629)
Q Consensus 514 ~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i-~~l 590 (629)
...++.+|||||+|||+|||||+.+|+||||||||+|||+.++..|.+.|+++ +.+||+||||++++..+||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 34567899999999999999999999999999999999999999999999887 468999999999999999996 578
Q ss_pred eCCEEEEecCCHHHHH
Q psy10512 591 ENGKVTKWEGNILDYK 606 (629)
Q Consensus 591 ~~G~i~~~~g~~~~~~ 606 (629)
++|+++. .|+++++.
T Consensus 274 ~~G~i~~-~g~~~~~~ 288 (305)
T PRK14264 274 TGGELVE-YDDTDKIF 288 (305)
T ss_pred cCCEEEE-eCCHHHHH
Confidence 9999974 67776654
No 473
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.8e-37 Score=346.19 Aligned_cols=204 Identities=28% Similarity=0.372 Sum_probs=167.5
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCC--CCCccEEEECC---------------
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDL--TPSVGMVRKNS--------------- 462 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~--~p~~G~i~~~~--------------- 462 (629)
|+++|+++.|++ . .+|+++||+|.+|++++|+|||||||||||++|+|++ +|++|+|.+++
T Consensus 1 l~~~~l~~~~~~-~-~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG-K-EVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC-e-EeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999953 3 4899999999999999999999999999999999997 79999998751
Q ss_pred -----------------------------ceeEEeeccchhcccCCCCCHHHHHhhc-----CCChhhHHHHHHHHHHcC
Q psy10512 463 -----------------------------HLRFARYHQHLHELLDLDISPLDYMLQS-----FPEVKDREEMRKIIGRYG 508 (629)
Q Consensus 463 -----------------------------~~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g 508 (629)
+..++|++|... .+....++.+++... .+.....+++.++++.+|
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~-~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTF-ALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEecccc-ccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 013677777522 123345776665421 111123456788999999
Q ss_pred CCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhc
Q psy10512 509 LTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVA 584 (629)
Q Consensus 509 l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~ 584 (629)
|.... ++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+|
T Consensus 158 l~~~~-~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~ 236 (520)
T TIGR03269 158 LSHRI-THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLS 236 (520)
T ss_pred Chhhh-hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhc
Confidence 97544 5578999999999999999999999999999999999999999998888765 568999999999999999
Q ss_pred CEEEEEeCCEEEEecCCHHHHHHH
Q psy10512 585 EEIWICENGKVTKWEGNILDYKET 608 (629)
Q Consensus 585 d~i~~l~~G~i~~~~g~~~~~~~~ 608 (629)
|+|++|++|+++ +.|+++++...
T Consensus 237 d~i~~l~~G~i~-~~g~~~~~~~~ 259 (520)
T TIGR03269 237 DKAIWLENGEIK-EEGTPDEVVAV 259 (520)
T ss_pred CEEEEEeCCEEe-eecCHHHHHHH
Confidence 999999999997 47888777554
No 474
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-37 Score=312.06 Aligned_cols=204 Identities=21% Similarity=0.220 Sum_probs=165.4
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
.++|+++|+++.|++ . .+|+|+||+|++||+++|+||||||||||+++|+|++.| ++|+|.+++.
T Consensus 4 ~~~i~~~~l~~~~~~-~-~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 81 (253)
T PRK14261 4 EIILSTKNLNLWYGE-K-HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGAD 81 (253)
T ss_pred cceEEEeeeEEEECC-e-eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccc
Confidence 358999999999963 3 489999999999999999999999999999999999763 4899988752
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhc--CC---C-hhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQS--FP---E-VKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRV 529 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~-~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv 529 (629)
..++|++|... +.. .++.+++... .. . ....+.+.++++.+++... ...+++.+|||||+|||
T Consensus 82 ~~~~~~~i~~~~q~~~--~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 82 VVALRRKIGMVFQRPN--PFP-KSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhhhceEEEEecCCc--cCc-ccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHH
Confidence 13678888753 222 4777765421 10 1 1123456778888887421 23457789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 530 VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 530 ~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
+|||||+.+|++|||||||+|||+.+++.+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+.+++.
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 236 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLI-EFDKTTQIF 236 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEE-EcCCHHHHH
Confidence 9999999999999999999999999999999999876 468999999999999999999999999997 467776653
No 475
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.1e-37 Score=310.25 Aligned_cols=194 Identities=26% Similarity=0.407 Sum_probs=158.6
Q ss_pred CCeEEEEEEEEEEcCC-CCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------e
Q psy10512 397 PPVIMVQNVSFRYSDD-GPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------L 464 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~-~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~ 464 (629)
.++|+++|+++.|++. ...+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4689999999999642 224899999999999999999999999999999999999999999998763 2
Q ss_pred eEEeeccchhcccCCCCCHHHHHhhcCCChh--------hHHHHHHHHHHc--CCCCcccccCcCcCChhHHHHHHHHHH
Q psy10512 465 RFARYHQHLHELLDLDISPLDYMLQSFPEVK--------DREEMRKIIGRY--GLTGRQQVCPIRQLSDGQKCRVVFAYL 534 (629)
Q Consensus 465 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGqkqrv~lAra 534 (629)
.++|++|... .+ ..++.+++........ ....+.++++.+ |+.... ..++.+|||||+|||+||||
T Consensus 89 ~i~~~~q~~~-l~--~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~-~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 89 KVSLVGQEPV-LF--ARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEV-GEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred hEEEEecccH-HH--hhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchh-hcCCCcCCHHHHHHHHHHHH
Confidence 4788888753 22 2477776643221110 011245677888 776543 45679999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 535 AWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 535 l~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
|+.+|++|||||||++||+.+++.+.+.|.++ +.|||+||||++++. .||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVE-RADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHH-hCCEEEEecCCcC
Confidence 99999999999999999999999999999876 358999999999996 5999999999874
No 476
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=100.00 E-value=2.5e-37 Score=287.52 Aligned_cols=144 Identities=45% Similarity=0.745 Sum_probs=135.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCC
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~ 479 (629)
|+++|+++.|++ . .+++++||++++||+++|+||||||||||+++|+|+++|++|+|.+++...++|++|
T Consensus 1 l~~~~l~~~~~~-~-~~l~~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~~~i~~~~~-------- 70 (144)
T cd03221 1 IELENLSKTYGG-K-LLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGSTVKIGYFEQ-------- 70 (144)
T ss_pred CEEEEEEEEECC-c-eEEEeeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCeEEEEEEcc--------
Confidence 468999999964 3 489999999999999999999999999999999999999999999988666677665
Q ss_pred CCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q psy10512 480 DISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDAL 559 (629)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l 559 (629)
||+||+||++|||||+.+|++|||||||++||+.++..+
T Consensus 71 -----------------------------------------lS~G~~~rv~laral~~~p~illlDEP~~~LD~~~~~~l 109 (144)
T cd03221 71 -----------------------------------------LSGGEKMRLALAKLLLENPNLLLLDEPTNHLDLESIEAL 109 (144)
T ss_pred -----------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHH
Confidence 999999999999999999999999999999999999999
Q ss_pred HHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCE
Q psy10512 560 ADAINDFEGGLVLVSHDFRLINQVAEEIWICENGK 594 (629)
Q Consensus 560 ~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~ 594 (629)
.+.|++++.++|++|||.+++..+||++++|++|+
T Consensus 110 ~~~l~~~~~til~~th~~~~~~~~~d~v~~l~~g~ 144 (144)
T cd03221 110 EEALKEYPGTVILVSHDRYFLDQVATKIIELEDGK 144 (144)
T ss_pred HHHHHHcCCEEEEEECCHHHHHHhCCEEEEEeCCC
Confidence 99999988899999999999999999999999985
No 477
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.7e-37 Score=297.94 Aligned_cols=159 Identities=37% Similarity=0.560 Sum_probs=133.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------eEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-----------RFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-----------~~~~ 468 (629)
|+++|++++|+.....+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.+++.. .++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 47899999996432348999999999999999999999999999999999999999999988731 2445
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCC
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPT 548 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT 548 (629)
++|... +.. .++.+++ |||||+|||+|||||+.+|++|||||||
T Consensus 81 ~~q~~~--~~~-~tv~~~l---------------------------------LS~G~~qrv~la~al~~~p~~lllDEPt 124 (173)
T cd03246 81 LPQDDE--LFS-GSIAENI---------------------------------LSGGQRQRLGLARALYGNPRILVLDEPN 124 (173)
T ss_pred ECCCCc--ccc-CcHHHHC---------------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 444321 111 1222221 9999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 549 NHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 549 ~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
++||+.++..+.+.|.++ +.|||+||||.+++ .+||++++|++|++
T Consensus 125 ~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~G~i 173 (173)
T cd03246 125 SHLDVEGERALNQAIAALKAAGATRIVIAHRPETL-ASADRILVLEDGRV 173 (173)
T ss_pred cccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH-HhCCEEEEEECCCC
Confidence 999999999999999775 45899999999998 47999999999874
No 478
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.1e-37 Score=293.08 Aligned_cols=158 Identities=25% Similarity=0.394 Sum_probs=132.1
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEeeccchhcccCC
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~~~q~~~~~~~~ 479 (629)
|+++|+++.|++ . .+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+++... .
T Consensus 1 l~~~~l~~~~~~-~-~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~-~------------ 65 (163)
T cd03216 1 LELRGITKRFGG-V-KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEV-S------------ 65 (163)
T ss_pred CEEEEEEEEECC-e-EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEC-C------------
Confidence 478999999963 3 489999999999999999999999999999999999999999999876310 0
Q ss_pred CCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q psy10512 480 DISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDAL 559 (629)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~~LD~~~~~~l 559 (629)
.....+. .+ ..+++ +.+|||||+|||+||||++.+|++|||||||++||+.+++.+
T Consensus 66 ~~~~~~~-------------~~---~~i~~--------~~qLS~G~~qrl~laral~~~p~illlDEP~~~LD~~~~~~l 121 (163)
T cd03216 66 FASPRDA-------------RR---AGIAM--------VYQLSVGERQMVEIARALARNARLLILDEPTAALTPAEVERL 121 (163)
T ss_pred cCCHHHH-------------Hh---cCeEE--------EEecCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHH
Confidence 0000000 00 00111 112999999999999999999999999999999999999999
Q ss_pred HHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEE
Q psy10512 560 ADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVT 596 (629)
Q Consensus 560 ~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~ 596 (629)
.+.|+++ +.|||++|||++++..+||++++|++|+++
T Consensus 122 ~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~ 161 (163)
T cd03216 122 FKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVV 161 (163)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999876 468999999999999999999999999986
No 479
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-37 Score=315.33 Aligned_cols=216 Identities=20% Similarity=0.250 Sum_probs=157.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC-----CCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVP-----VPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p-----~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+..| +.|++.+.+. .+........
T Consensus 6 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~--~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGE--NIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE--Eccccccchh
Confidence 69999999999988999999999999999999999999999999999998753 3677766432 2211000000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhcc-ChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI-SADTAEARAANILHGLGFTK---EMQQKKTKDFSGGW 237 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGq 237 (629)
..+..+....+....+ +. +..++..+....... .....+..+.++++.+++.. ...++.+.+|||||
T Consensus 84 -------~~~~~i~~~~q~~~~~-~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 154 (253)
T PRK14261 84 -------ALRRKIGMVFQRPNPF-PK-SIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQ 154 (253)
T ss_pred -------hhhceEEEEecCCccC-cc-cHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHH
Confidence 0000000011111111 11 222222221111111 12233456778888888742 34678899999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCc
Q psy10512 238 RMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGN 313 (629)
Q Consensus 238 rqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~ 313 (629)
|||++|||||+.+|+||||||||++||+.++.++.+.|.++ +.|||++|||++++..+||++++|++|+++..+..
T Consensus 155 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~ 232 (253)
T PRK14261 155 QQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKT 232 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCH
Confidence 99999999999999999999999999999999999988765 47999999999999999999999999999876554
No 480
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-38 Score=303.46 Aligned_cols=199 Identities=29% Similarity=0.439 Sum_probs=166.6
Q ss_pred CCCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------
Q psy10512 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------ 463 (629)
Q Consensus 396 ~~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------ 463 (629)
..++|+++||++.|++ +.+|+|+||+|++||.++|+|||||||||||++++|.++|++|.+.+.|+
T Consensus 28 ~~~li~l~~v~v~r~g--k~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G~~~~~~elr 105 (257)
T COG1119 28 NEPLIELKNVSVRRNG--KKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFGKGETIFELR 105 (257)
T ss_pred CcceEEecceEEEECC--EeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeeccCCcchHHHH
Confidence 3578999999999953 35999999999999999999999999999999999999999999987653
Q ss_pred eeEEeeccchhcccCCCCCHHHHHhhcC------C----ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHH
Q psy10512 464 LRFARYHQHLHELLDLDISPLDYMLQSF------P----EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAY 533 (629)
Q Consensus 464 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 533 (629)
.++|++...+...+....++.+.+..++ + .....+++..+++.+|+.+ ..+++..+||-||||||.|||
T Consensus 106 k~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~-la~r~~~~LS~Ge~rrvLiaR 184 (257)
T COG1119 106 KRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKH-LADRPFGSLSQGEQRRVLIAR 184 (257)
T ss_pred HHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhh-hccCchhhcCHhHHHHHHHHH
Confidence 2467776555444444444544433221 1 2234567888999999986 456799999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhcC-----ceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 534 LAWQAPHLLLLDEPTNHLDMETIDALADAINDFE-----GGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 534 al~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~-----~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
||+.+|++|||||||+|||...++.+.+.|.++. .++|+|||..+++..+.++++.+.+|+++.
T Consensus 185 ALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll~~g~v~~ 253 (257)
T COG1119 185 ALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLLKEGEVVA 253 (257)
T ss_pred HHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEeeCCceee
Confidence 9999999999999999999999999999998873 359999999999999999999999999973
No 481
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.4e-37 Score=308.76 Aligned_cols=196 Identities=21% Similarity=0.310 Sum_probs=161.7
Q ss_pred eEEEEEEEEEEcCCC--CeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCC---CCccEEEECCc--------ee
Q psy10512 399 VIMVQNVSFRYSDDG--PWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLT---PSVGMVRKNSH--------LR 465 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~--~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~---p~~G~i~~~~~--------~~ 465 (629)
++.++||+++|+..+ ..+|+|+||+|.+||+++|+||||||||||+++|+|+++ |++|+|.+++. ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 567999999996542 458999999999999999999999999999999999999 99999998763 24
Q ss_pred EEeeccchhcccCCCCCHHHHHhhc----CCC----hhhHHHHHH-HHHHcCCCCcccccCcCcCChhHHHHHHHHHHHc
Q psy10512 466 FARYHQHLHELLDLDISPLDYMLQS----FPE----VKDREEMRK-IIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAW 536 (629)
Q Consensus 466 ~~~~~q~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~-~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 536 (629)
++|++|... +....|+.+++... .+. ......+.. +++.+++.... .+++.+|||||+|||+|||||+
T Consensus 83 i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~ 159 (226)
T cd03234 83 VAYVRQDDI--LLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIG-GNLVKGISGGERRRVSIAVQLL 159 (226)
T ss_pred EEEeCCCCc--cCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhh-cccccCcCHHHHHHHHHHHHHH
Confidence 788888743 33456777765421 111 011123444 88999987543 4577999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCH-HHHHhhcCEEEEEeCCEEEE
Q psy10512 537 QAPHLLLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDF-RLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 537 ~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~-~~~~~~~d~i~~l~~G~i~~ 597 (629)
.+|++|||||||+|||+.++..+.+.|.++ +.|+|++||+. +++..+||++++|++|+++.
T Consensus 160 ~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~ 224 (226)
T cd03234 160 WDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVY 224 (226)
T ss_pred hCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEe
Confidence 999999999999999999999999999765 46899999998 68999999999999999974
No 482
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-37 Score=296.23 Aligned_cols=160 Identities=29% Similarity=0.463 Sum_probs=136.4
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce----------eEEee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------RFARY 469 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------~~~~~ 469 (629)
|+++|+++.|+. . .+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 l~~~~l~~~~~~-~-~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 78 (173)
T cd03230 1 IEVRNLSKRYGK-K-TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYL 78 (173)
T ss_pred CEEEEEEEEECC-e-eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEE
Confidence 468999999963 3 48999999999999999999999999999999999999999999987742 34555
Q ss_pred ccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q psy10512 470 HQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~ 549 (629)
+|... +....++.+++. |||||+|||+|||||+.+|++|||||||+
T Consensus 79 ~q~~~--~~~~~tv~~~~~--------------------------------LS~G~~qrv~laral~~~p~illlDEPt~ 124 (173)
T cd03230 79 PEEPS--LYENLTVRENLK--------------------------------LSGGMKQRLALAQALLHDPELLILDEPTS 124 (173)
T ss_pred ecCCc--cccCCcHHHHhh--------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 55532 122233333221 99999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEE
Q psy10512 550 HLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKV 595 (629)
Q Consensus 550 ~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i 595 (629)
+||+.++..+.+.|.++ +.++|++|||.+++..+||++++|++|++
T Consensus 125 ~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 125 GLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999876 36899999999999999999999999864
No 483
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-37 Score=309.41 Aligned_cols=213 Identities=20% Similarity=0.338 Sum_probs=147.4
Q ss_pred eEEEEeEEEEeCC-eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 87 DVKIANFSITFHG-CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 87 ~i~i~nls~~y~~-~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
.|+++|++++|++ +.+|+|+||+|++|++++|+|||||||||||++|+|+++|++|++.+.+.. +.......
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~--~~~~~~~~----- 74 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGID--IRDISRKS----- 74 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEe--HHHcCHHH-----
Confidence 4899999999975 579999999999999999999999999999999999999999998775421 11000000
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHH-----HHHHHHHhC--CCCchhhhcccCCCChHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEA-----RAANILHGL--GFTKEMQQKKTKDFSGGWR 238 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~L~~l--gl~~~~~~~~~~~LSGGqr 238 (629)
.+..+.+..+....+ +. +..++...+.. ......... .+..+++.+ |+. ...++.+.+||||||
T Consensus 75 ----~~~~i~~~~q~~~~~-~~-tv~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~LS~G~~ 145 (229)
T cd03254 75 ----LRSMIGVVLQDTFLF-SG-TIMENIRLGRP--NATDEEVIEAAKEAGAHDFIMKLPNGYD-TVLGENGGNLSQGER 145 (229)
T ss_pred ----HhhhEEEecCCchhh-hh-HHHHHHhccCC--CCCHHHHHHHHHHhChHHHHHhCccccc-CHhhcCCCcCCHHHH
Confidence 000000000000000 00 11111111100 000000000 122333333 443 234667899999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcCcHHH
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEA 316 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g~~~~ 316 (629)
|||+|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+|||+++++. .||++++|++|+++.. ++++.
T Consensus 146 ~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~i~~l~~g~~~~~-~~~~~ 223 (229)
T cd03254 146 QLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIK-NADKILVLDDGKIIEE-GTHDE 223 (229)
T ss_pred HHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHh-hCCEEEEEeCCeEEEe-CCHHH
Confidence 9999999999999999999999999999999999998776 479999999999996 5999999999999864 45544
Q ss_pred H
Q psy10512 317 F 317 (629)
Q Consensus 317 ~ 317 (629)
+
T Consensus 224 ~ 224 (229)
T cd03254 224 L 224 (229)
T ss_pred H
Confidence 3
No 484
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.9e-37 Score=296.85 Aligned_cols=164 Identities=31% Similarity=0.478 Sum_probs=138.2
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce----------eEEee
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL----------RFARY 469 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~----------~~~~~ 469 (629)
|+++|+++.|+.....+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+++.. .++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 47899999996432248999999999999999999999999999999999999999999998741 24555
Q ss_pred ccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q psy10512 470 HQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPT~ 549 (629)
+|+.. +. ..++.+++ +.+|||||+|||+||||++.+|++|||||||+
T Consensus 81 ~q~~~--~~-~~tv~~~i------------------------------~~~LS~G~~qrv~laral~~~p~~lllDEP~~ 127 (178)
T cd03247 81 NQRPY--LF-DTTLRNNL------------------------------GRRFSGGERQRLALARILLQDAPIVLLDEPTV 127 (178)
T ss_pred ccCCe--ee-cccHHHhh------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEECCcc
Confidence 55431 11 12222221 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 550 HLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 550 ~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
+||+.+++.+.+.|.++ +.|||++|||.+++. .||++++|++|+++.
T Consensus 128 ~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~~~~l~~g~i~~ 176 (178)
T cd03247 128 GLDPITERQLLSLIFEVLKDKTLIWITHHLTGIE-HMDKILFLENGKIIM 176 (178)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCCEEEEEECCEEEe
Confidence 99999999999999876 568999999999996 699999999999863
No 485
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.9e-37 Score=294.56 Aligned_cols=159 Identities=25% Similarity=0.332 Sum_probs=132.8
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++|++++|+++++|+++||+|++||+++|+|||||||||||++|+|+++|++|++.+.+.. +...
T Consensus 1 l~~~~l~~~~~~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~--~~~~----------- 67 (163)
T cd03216 1 LELRGITKRFGGVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKE--VSFA----------- 67 (163)
T ss_pred CEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEE--CCcC-----------
Confidence 478999999998899999999999999999999999999999999999999999998774321 1000
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
... . . .-..+++ +.+|||||+||++|||||
T Consensus 68 ~~~--------------------~-------------------~---~~~~i~~--------~~qLS~G~~qrl~laral 97 (163)
T cd03216 68 SPR--------------------D-------------------A---RRAGIAM--------VYQLSVGERQMVEIARAL 97 (163)
T ss_pred CHH--------------------H-------------------H---HhcCeEE--------EEecCHHHHHHHHHHHHH
Confidence 000 0 0 0000111 112999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEcCCeEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLDKRKLKY 309 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~ 309 (629)
+.+|++|||||||++||+.++..+.+.|+++ +.|+|++|||++++..+||++++|++|++++
T Consensus 98 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 98 ARNARLLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred hcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999998765 5799999999999999999999999999864
No 486
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.9e-38 Score=306.88 Aligned_cols=195 Identities=22% Similarity=0.281 Sum_probs=149.3
Q ss_pred EEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhhhc
Q psy10512 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167 (629)
Q Consensus 88 i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~~~ 167 (629)
|+++||++.|+++.+|+|+||+|++|+++||+|+||||||||+++|+|+++|++|++.+.+... .... .
T Consensus 1 l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~--~~~~-~-------- 69 (201)
T cd03231 1 LEADELTCERDGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPL--DFQR-D-------- 69 (201)
T ss_pred CEEEEEEEEeCCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEec--cccc-H--------
Confidence 4789999999988999999999999999999999999999999999999999999988754221 1000 0
Q ss_pred hHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHHHHHHHHHHH
Q psy10512 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARAL 247 (629)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 247 (629)
..+..+..+.++....+. .+..++...+.. ....+++.++++.+|+. ...++++.+||||||||++|||||
T Consensus 70 -~~~~~i~~~~q~~~~~~~-~tv~e~l~~~~~------~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~laral 140 (201)
T cd03231 70 -SIARGLLYLGHAPGIKTT-LSVLENLRFWHA------DHSDEQVEEALARVGLN-GFEDRPVAQLSAGQQRRVALARLL 140 (201)
T ss_pred -HhhhheEEeccccccCCC-cCHHHHHHhhcc------cccHHHHHHHHHHcCCh-hhhcCchhhCCHHHHHHHHHHHHH
Confidence 000011111111111111 122222221111 11245678899999996 467889999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEE
Q psy10512 248 YVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHL 302 (629)
Q Consensus 248 ~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l 302 (629)
+.+|++|||||||++||+.++.++.+.|.++ +.|+|+||||...+..+|++++.+
T Consensus 141 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 141 LSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999999999998765 689999999999999999999876
No 487
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.4e-37 Score=356.39 Aligned_cols=202 Identities=28% Similarity=0.428 Sum_probs=173.4
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
-|+++||+|+|++..+++|+|+||+|++|+++||+|+||||||||+|+|+|+++|++|+|.++|. ..++
T Consensus 451 ~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 530 (686)
T TIGR03797 451 AIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLG 530 (686)
T ss_pred eEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccE
Confidence 58999999999644445999999999999999999999999999999999999999999999873 3589
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCccccc----------CcCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVC----------PIRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~ 537 (629)
|++|+.. -++.|+.+++....+ .+.+++.++++..|+.+..... ....||||||||++|||||++
T Consensus 531 ~v~Q~~~---lf~gTI~eNi~~~~~--~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~ 605 (686)
T TIGR03797 531 VVLQNGR---LMSGSIFENIAGGAP--LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVR 605 (686)
T ss_pred EEccCCc---cCcccHHHHHhcCCC--CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999864 245688898875544 4567788888888876432211 125799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhcCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|++|||||||++||+.+.+.+.+.|.+++.|+|+|||+++.+.. ||+|++|++|+|++ .|++++..+
T Consensus 606 ~p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~~-~D~Iivl~~G~iv~-~G~~~~Ll~ 673 (686)
T TIGR03797 606 KPRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIRN-ADRIYVLDAGRVVQ-QGTYDELMA 673 (686)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHHc-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999988899999999999865 99999999999984 798877643
No 488
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6e-37 Score=314.31 Aligned_cols=199 Identities=24% Similarity=0.362 Sum_probs=165.6
Q ss_pred EEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEEe
Q psy10512 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFAR 468 (629)
Q Consensus 400 l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~~ 468 (629)
|+++|++++|+++...+|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|.+++. ..++|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 78999999996433458999999999999999999999999999999999998 7899999873 25788
Q ss_pred eccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCc-----------CChhHHHHHHHHHHHcc
Q psy10512 469 YHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQ-----------LSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 469 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-----------LSgGqkqrv~lAral~~ 537 (629)
++|... + +..|+.+++.. +.. ...+++.++++.+|+..... ..+.. |||||+|||+|||||+.
T Consensus 82 v~q~~~--l-f~~tv~~nl~~-~~~-~~~~~~~~~l~~~gL~~~~~-~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~ 155 (275)
T cd03289 82 IPQKVF--I-FSGTFRKNLDP-YGK-WSDEEIWKVAEEVGLKSVIE-QFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLS 155 (275)
T ss_pred ECCCcc--c-chhhHHHHhhh-ccC-CCHHHHHHHHHHcCCHHHHH-hCcccccceecCCCCCCCHHHHHHHHHHHHHhc
Confidence 888753 2 23477777632 111 23456788899999975443 34444 99999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+|+||||||||++||+.+...+.+.|.+. +.|||+||||++++.. ||||++|++|+++. .|+++++..
T Consensus 156 ~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~-~g~~~~l~~ 225 (275)
T cd03289 156 KAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQ-YDSIQKLLN 225 (275)
T ss_pred CCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEee-cCCHHHHhh
Confidence 99999999999999999999999999865 4689999999999975 99999999999985 577766544
No 489
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=309.12 Aligned_cols=204 Identities=22% Similarity=0.321 Sum_probs=154.2
Q ss_pred eEEEEeEEEEeCC--------------------eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEE
Q psy10512 87 DVKIANFSITFHG--------------------CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDI 146 (629)
Q Consensus 87 ~i~i~nls~~y~~--------------------~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i 146 (629)
.|+++||++.|.. +++|+++||+|++|++++|+||||||||||+++|+|+++|++|++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 3778888877732 34899999999999999999999999999999999999999999876
Q ss_pred EeecccCCCCCcchhhhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCchhh
Q psy10512 147 FHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQ 226 (629)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~~~~ 226 (629)
.+........ . ...+..+..++..................+..+++.+++. +..
T Consensus 84 ~g~~~~~~~~-~------------------------~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~ 137 (264)
T PRK13546 84 NGEVSVIAIS-A------------------------GLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELG-EFI 137 (264)
T ss_pred CCEEeEEecc-c------------------------CCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-hhh
Confidence 5421000000 0 0000011111111110111122233344566788888986 567
Q ss_pred hcccCCCChHHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc---CCEEEEEecCHHHHHhhcceeEEEc
Q psy10512 227 QKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY---KRILVIISHSQDFLNGVCTNIIHLD 303 (629)
Q Consensus 227 ~~~~~~LSGGqrqRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~---~~tvIivsHd~~~l~~~~d~ii~l~ 303 (629)
++++.+|||||+|||+|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|+
T Consensus 138 ~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~ 217 (264)
T PRK13546 138 YQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIE 217 (264)
T ss_pred cCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEE
Confidence 8899999999999999999999999999999999999999999999888654 6899999999999999999999999
Q ss_pred CCeEEEEcCcHHHH
Q psy10512 304 KRKLKYYGGNYEAF 317 (629)
Q Consensus 304 ~G~i~~~~g~~~~~ 317 (629)
+|+++..+ +.+.+
T Consensus 218 ~G~i~~~g-~~~~~ 230 (264)
T PRK13546 218 GGKLKDYG-ELDDV 230 (264)
T ss_pred CCEEEEeC-CHHHH
Confidence 99998764 44444
No 490
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-37 Score=327.54 Aligned_cols=203 Identities=27% Similarity=0.408 Sum_probs=172.0
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce-----------eEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-----------RFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~-----------~~~ 467 (629)
.++++||+|+|++..+++|+|+||++.+||.++|+|++|||||||+.+|+|.++|++|+|+.++.. .+.
T Consensus 336 ~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~ 415 (573)
T COG4987 336 ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETIS 415 (573)
T ss_pred eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHh
Confidence 799999999998766679999999999999999999999999999999999999999999998742 233
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccC----------cCcCChhHHHHHHHHHHHcc
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCP----------IRQLSDGQKCRVVFAYLAWQ 537 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~ 537 (629)
.+.|..+ -++-|+.+++....+. ...+++.++++.+||.+.....| ...|||||+||++|||+|++
T Consensus 416 vl~Qr~h---lF~~Tlr~NL~lA~~~-AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~ 491 (573)
T COG4987 416 VLTQRVH---LFSGTLRDNLRLANPD-ASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLH 491 (573)
T ss_pred hhccchH---HHHHHHHHHHhhcCCC-CCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHc
Confidence 3444432 1344677777666665 56788999999999875544332 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 538 APHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 538 ~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
+.+++||||||.|||+.+.+++++.|.+. ++|+|+|||++..++ .||||++|++|+++ .+|++.+...
T Consensus 492 dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le-~~drIivl~~Gkii-e~G~~~~Ll~ 561 (573)
T COG4987 492 DAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE-RMDRIIVLDNGKII-EEGTHAELLA 561 (573)
T ss_pred CCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh-hcCEEEEEECCeee-ecCCHHhhhc
Confidence 99999999999999999999999998765 579999999999996 58999999999997 5898877654
No 491
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-38 Score=291.94 Aligned_cols=202 Identities=26% Similarity=0.356 Sum_probs=170.7
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCceeEEe----------
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFAR---------- 468 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~~~~---------- 468 (629)
||+++||+++|+. ..+++++|++|++|.+++|||||||||||||.+++.++++++|+|.++|..-..+
T Consensus 1 MI~i~nv~K~y~~--~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lS 78 (252)
T COG4604 1 MITIENVSKSYGT--KVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLS 78 (252)
T ss_pred CeeehhhhHhhCC--EEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHH
Confidence 5789999999963 4589999999999999999999999999999999999999999999988532222
Q ss_pred -eccchhcccCCCCCHHHHHhhc-CC------ChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCC
Q psy10512 469 -YHQHLHELLDLDISPLDYMLQS-FP------EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540 (629)
Q Consensus 469 -~~q~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 540 (629)
+.|.. .+...+|+.+.+..+ || ...++..+.++++.++|.+. .++...+||||||||+.+|+.++++.+
T Consensus 79 ILkQ~N--~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l-~dryLd~LSGGQrQRAfIAMVlaQdTd 155 (252)
T COG4604 79 ILKQEN--HINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDL-SDRYLDELSGGQRQRAFIAMVLAQDTD 155 (252)
T ss_pred HHHhhc--hhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccch-HHHhHHhcccchhhhhhhheeeeccCc
Confidence 23332 234556777765432 22 23567788999999999865 456889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHhh----cCceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHH
Q psy10512 541 LLLLDEPTNHLDMETIDALADAIND----FEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606 (629)
Q Consensus 541 lLlLDEPT~~LD~~~~~~l~~~l~~----~~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 606 (629)
.++||||.|+||+...-.+++.|++ +++|||+|-||.+|+..++|.|+.|.+|+++ ..|++++..
T Consensus 156 yvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv-~~G~~~eii 224 (252)
T COG4604 156 YVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVV-KQGSPDEII 224 (252)
T ss_pred EEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEE-ecCCHHHhc
Confidence 9999999999999998888887764 5889999999999999999999999999997 589988764
No 492
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=287.56 Aligned_cols=197 Identities=28% Similarity=0.375 Sum_probs=166.4
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCce------eEEeecc
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL------RFARYHQ 471 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~------~~~~~~q 471 (629)
+++.+++++.+|+.....+|+|+|++|.+||.++++|||||||||||++++|+.+|+.|+|.++++. .-|.++|
T Consensus 2 ~~l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPgaergvVFQ 81 (259)
T COG4525 2 CMLNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGAERGVVFQ 81 (259)
T ss_pred ceeehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCccceeEec
Confidence 3678999999996544348999999999999999999999999999999999999999999998752 3467778
Q ss_pred chhcccCCCCCHHHHHhh-----cCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 472 HLHELLDLDISPLDYMLQ-----SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
+.. +.+-+++.+++.. +.++....+.+.+.|..+||.+.. ++.+.+|||||||||.|||||+.+|++|+|||
T Consensus 82 ~~~--LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~-~~~i~qLSGGmrQRvGiARALa~eP~~LlLDE 158 (259)
T COG4525 82 NEA--LLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAE-HKYIWQLSGGMRQRVGIARALAVEPQLLLLDE 158 (259)
T ss_pred cCc--cchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCccccc-ccceEeecchHHHHHHHHHHhhcCcceEeecC
Confidence 753 3334566666543 334445567788999999998765 56789999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CceEEEEecCHHHHHhhcCEEEEEe--CCEEEE
Q psy10512 547 PTNHLDMETIDALADAINDF----EGGLVLVSHDFRLINQVAEEIWICE--NGKVTK 597 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~----~~~vi~vsHd~~~~~~~~d~i~~l~--~G~i~~ 597 (629)
|+.+||.-+++.+.++|-+. +..+++||||++++.-+++|+++|. .|+|+.
T Consensus 159 PfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~ 215 (259)
T COG4525 159 PFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVE 215 (259)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeE
Confidence 99999999999988887654 6789999999999999999999998 568864
No 493
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-37 Score=330.96 Aligned_cols=202 Identities=32% Similarity=0.449 Sum_probs=172.1
Q ss_pred eEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeEE
Q psy10512 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRFA 467 (629)
Q Consensus 399 ~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~~ 467 (629)
.++++|+++.|++++ ++++|+||++++|+.++|||+||||||||+++|+|+++|+.|+|.+++. ..+.
T Consensus 320 ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 320 EISLENLSFRYPDGK-PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred eeeecceEEecCCCC-cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 466779999998665 4899999999999999999999999999999999999999999999873 3578
Q ss_pred eeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccc-----cCcC----cCChhHHHHHHHHHHHccC
Q psy10512 468 RYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQV-----CPIR----QLSDGQKCRVVFAYLAWQA 538 (629)
Q Consensus 468 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----~~~~----~LSgGqkqrv~lAral~~~ 538 (629)
+++|++. -+.-|..+++....+. .+++++.+++++.|+.+.... ..++ .|||||+|||+|||||+++
T Consensus 399 ~v~Q~p~---lf~gTireNi~l~~~~-~s~e~i~~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 399 WVSQNPY---LFAGTIRENILLARPD-ASDEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred eeCCCCc---cccccHHHHhhccCCc-CCHHHHHHHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 8888863 2456788888765554 567788889988887644332 2233 4999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHHHH
Q psy10512 539 PHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKE 607 (629)
Q Consensus 539 p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 607 (629)
++++||||||+|||.++.+.+.+.|.+. +.|+|+|||++..+.. ||+|++|++|+++. .|.+++..+
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~-~D~I~vld~G~l~~-~g~~~~L~~ 543 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD-ADRIVVLDNGRLVE-QGTHEELSE 543 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhc-CCEEEEecCCceec-cCCHHHHhh
Confidence 9999999999999999999999999887 5799999999999966 89999999999975 788877643
No 494
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-36 Score=300.27 Aligned_cols=186 Identities=25% Similarity=0.338 Sum_probs=154.2
Q ss_pred CeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc-----------eeE
Q psy10512 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH-----------LRF 466 (629)
Q Consensus 398 ~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~~ 466 (629)
..|+++|++++|+.....+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+++. ..+
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 468999999999643234899999999999999999999999999999999999999999998863 258
Q ss_pred EeeccchhcccCCCCCHHHHHhhcCCChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCEEEEeC
Q psy10512 467 ARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546 (629)
Q Consensus 467 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 546 (629)
+|++|+.. +. ..++.+++... .. ...+.+.+.++ + ..++.+|||||+|||+|||||+.+|++|||||
T Consensus 85 ~~v~q~~~--~~-~~tv~~~l~~~-~~-~~~~~~~~~l~---~-----~~~~~~LS~G~~qrv~laral~~~p~llllDE 151 (207)
T cd03369 85 TIIPQDPT--LF-SGTIRSNLDPF-DE-YSDEEIYGALR---V-----SEGGLNLSQGQRQLLCLARALLKRPRVLVLDE 151 (207)
T ss_pred EEEecCCc--cc-CccHHHHhccc-CC-CCHHHHHHHhh---c-----cCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 88888753 22 34777776421 11 12233444443 2 24568999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEE
Q psy10512 547 PTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTK 597 (629)
Q Consensus 547 PT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~ 597 (629)
||++||+.++..+.+.|.++ +.|+|++|||.+++.. ||++++|++|++..
T Consensus 152 P~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~-~d~v~~l~~g~i~~ 203 (207)
T cd03369 152 ATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIID-YDKILVMDAGEVKE 203 (207)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-CCEEEEEECCEEEe
Confidence 99999999999999999876 4689999999999976 99999999999964
No 495
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.5e-37 Score=310.08 Aligned_cols=208 Identities=24% Similarity=0.370 Sum_probs=147.2
Q ss_pred EEEEeEEEEeCC--eeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhhh
Q psy10512 88 VKIANFSITFHG--CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVM 165 (629)
Q Consensus 88 i~i~nls~~y~~--~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~~ 165 (629)
|+++|+++.|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|++.+.+.. +.......
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~--~~~~~~~~----- 73 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHD--LALADPAW----- 73 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCee--hHhcCHHH-----
Confidence 468999999963 579999999999999999999999999999999999999999998875432 11000000
Q ss_pred hchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHH-----HHHHHHHHhC--CCCchhhhcccCCCChHHH
Q psy10512 166 EVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAE-----ARAANILHGL--GFTKEMQQKKTKDFSGGWR 238 (629)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~L~~l--gl~~~~~~~~~~~LSGGqr 238 (629)
.+..+..+.+... ..+. +..++...... ........ ..+.++++.+ ++. ...++++.+||||||
T Consensus 74 ----~~~~i~~~~q~~~-~~~~-tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~LSgG~~ 144 (237)
T cd03252 74 ----LRRQVGVVLQENV-LFNR-SIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYD-TIVGEQGAGLSGGQR 144 (237)
T ss_pred ----HhhcEEEEcCCch-hccc-hHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCccccc-chhhcCCCcCCHHHH
Confidence 0000000000000 0011 11111111100 00010100 1223445555 554 345778999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
|||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||++|||++++. .||++++|++|+++..+.
T Consensus 145 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~ 219 (237)
T cd03252 145 QRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGS 219 (237)
T ss_pred HHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcC
Confidence 9999999999999999999999999999999999998765 579999999999996 699999999999987653
No 496
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=299.89 Aligned_cols=216 Identities=24% Similarity=0.352 Sum_probs=165.6
Q ss_pred ceeEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCCceEEEeecccCCCCCcchhhhh
Q psy10512 85 SRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV 164 (629)
Q Consensus 85 ~~~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~p~~g~i~i~~~~~~~~~~~~~~~~~~ 164 (629)
...|+++|+++.|+++++|+|+|++|++||.++|+|||||||||||++|+|.+.|.+|.+.+.+.... ..+.
T Consensus 29 ~~li~l~~v~v~r~gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G--~~~~------ 100 (257)
T COG1119 29 EPLIELKNVSVRRNGKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFG--KGET------ 100 (257)
T ss_pred cceEEecceEEEECCEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeecc--CCcc------
Confidence 34699999999999999999999999999999999999999999999999999999998887653211 0000
Q ss_pred hhchHHHHHHHHHHHHHhc-cCChhHHHH-HHH-HHhhhhc---cChhhHHHHHHHHHHhCCCCchhhhcccCCCChHHH
Q psy10512 165 MEVDEERVRLEKLAEQLVA-CEDDESQEQ-LMD-IYDRLDD---ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWR 238 (629)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~-~~~~l~~---~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSGGqr 238 (629)
....|..++.+...+.. +.......+ +.. .+..+.. -..+....++..+|+.+|+. ++.+++..+||-|||
T Consensus 101 --~~elrk~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~-~la~r~~~~LS~Ge~ 177 (257)
T COG1119 101 --IFELRKRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAK-HLADRPFGSLSQGEQ 177 (257)
T ss_pred --hHHHHHHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchh-hhccCchhhcCHhHH
Confidence 01223333332222211 111111111 111 1111111 11234567889999999997 589999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc-----CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEc
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY-----KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~-----~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~ 311 (629)
|||.|||||+.+|.+|||||||+|||..+++.+.+.|.++ +.++|+|||..+++..+.++++.+.+|++++.+
T Consensus 178 rrvLiaRALv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll~~g~v~~~g 255 (257)
T COG1119 178 RRVLIARALVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLLKEGEVVAQG 255 (257)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEeeCCceeecc
Confidence 9999999999999999999999999999999999988776 357999999999999999999999999998653
No 497
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-37 Score=342.23 Aligned_cols=198 Identities=24% Similarity=0.308 Sum_probs=166.2
Q ss_pred EEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCCCccEEEECCc------------eeEEee
Q psy10512 402 VQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSH------------LRFARY 469 (629)
Q Consensus 402 ~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p~~G~i~~~~~------------~~~~~~ 469 (629)
++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. ..++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 4689999963 34899999999999999999999999999999999999999999998763 247888
Q ss_pred ccchhcccCCCCCHHHHHhhcC--------CChhhHHHHHHHHHHcCCCCcccccCcCcCChhHHHHHHHHHHHccCCCE
Q psy10512 470 HQHLHELLDLDISPLDYMLQSF--------PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541 (629)
Q Consensus 470 ~q~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 541 (629)
+|... +....++.+++.... ......+.+.++++.+|+... .++++.+|||||||||+|||||+.+|++
T Consensus 79 ~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgGq~qrv~lA~al~~~p~l 155 (491)
T PRK10982 79 HQELN--LVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDID-PRAKVATLSVSQMQMIEIAKAFSYNAKI 155 (491)
T ss_pred ecccc--cccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCC-ccCchhhCCHHHHHHHHHHHHHHhCCCE
Confidence 88753 344568877764321 111123467889999999754 3567899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHhhc---CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 542 LLLDEPTNHLDMETIDALADAINDF---EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 542 LlLDEPT~~LD~~~~~~l~~~l~~~---~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+++
T Consensus 156 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 221 (491)
T PRK10982 156 VIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIA-TQPLAGL 221 (491)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEe-ecChhhC
Confidence 9999999999999999999998775 5689999999999999999999999999974 5665554
No 498
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-37 Score=311.18 Aligned_cols=216 Identities=19% Similarity=0.261 Sum_probs=158.1
Q ss_pred eEEEEeEEEEeCCeeeeEeeeEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC-----CCCCceEEEeecccCCCCCcchh
Q psy10512 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREV-----PVPDHIDIFHLTREMPASDKSAL 161 (629)
Q Consensus 87 ~i~i~nls~~y~~~~~L~~vsl~i~~Ge~~~liG~NGsGKSTLlk~L~g~~~-----p~~g~i~i~~~~~~~~~~~~~~~ 161 (629)
.|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.. |++|++.+++.. +.......
T Consensus 3 ~l~~~~v~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~--i~~~~~~~- 79 (250)
T PRK14266 3 RIEVENLNTYFDDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVD--IYDPAVDV- 79 (250)
T ss_pred EEEEEeEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEE--cccccccH-
Confidence 4899999999998889999999999999999999999999999999999864 367888775432 21100000
Q ss_pred hhhhhchHHHHHHHHHHHHHhccCChhHHHHHHHHHhhhhccChhhHHHHHHHHHHhCCCCc---hhhhcccCCCChHHH
Q psy10512 162 TCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK---EMQQKKTKDFSGGWR 238 (629)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~lgl~~---~~~~~~~~~LSGGqr 238 (629)
...+..+....++...+ +.+..+++...............+.++.++++.+|+.. ...++++.+|||||+
T Consensus 80 ------~~~~~~i~~~~q~~~~~-~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 ------VELRKKVGMVFQKPNPF-PKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQ 152 (250)
T ss_pred ------HHHhhheEEEecCCccC-cchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHH
Confidence 00000111111111111 11222222111111111112234567888999998842 345788999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CCEEEEEecCHHHHHhhcceeEEEcCCeEEEEcC
Q psy10512 239 MRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGG 312 (629)
Q Consensus 239 qRv~LAraL~~~P~iLLLDEPT~~LD~~~~~~l~~~L~~~--~~tvIivsHd~~~l~~~~d~ii~l~~G~i~~~~g 312 (629)
||++|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|++.+.+.
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~ 228 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGL 228 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCC
Confidence 9999999999999999999999999999999999998765 5799999999999999999999999999987643
No 499
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=311.10 Aligned_cols=204 Identities=21% Similarity=0.231 Sum_probs=165.1
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
.++|+++|++++|+. . .+|+++||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 14 ~~~l~~~~l~~~~~~-~-~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~ 91 (265)
T PRK14252 14 QQKSEVNKLNFYYGG-Y-QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPE 91 (265)
T ss_pred CceEEEEEEEEEECC-e-eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccc
Confidence 467999999999963 3 489999999999999999999999999999999999985 7999988642
Q ss_pred -------eeEEeeccchhcccCCCCCHHHHHhhcC-----CC-hhhHHHHHHHHHHcCCCC---cccccCcCcCChhHHH
Q psy10512 464 -------LRFARYHQHLHELLDLDISPLDYMLQSF-----PE-VKDREEMRKIIGRYGLTG---RQQVCPIRQLSDGQKC 527 (629)
Q Consensus 464 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkq 527 (629)
..++|++|... +.. .++.+++.... .. ....+.+..+++.+++.. .....++.+|||||+|
T Consensus 92 ~~~~~~~~~i~~~~q~~~--~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 168 (265)
T PRK14252 92 VDPIEVRMRISMVFQKPN--PFP-KSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQ 168 (265)
T ss_pred cCHHHHhccEEEEccCCc--CCc-chHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHH
Confidence 23678887643 222 36776654221 11 112355677888888742 1234567899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEeCCEEEEecCCHHHH
Q psy10512 528 RVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDY 605 (629)
Q Consensus 528 rv~lAral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 605 (629)
||+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++
T Consensus 169 rv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 247 (265)
T PRK14252 169 RLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIE-FGATDTI 247 (265)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 999999999999999999999999999999999999876 3589999999999999999999999999975 5776655
Q ss_pred H
Q psy10512 606 K 606 (629)
Q Consensus 606 ~ 606 (629)
.
T Consensus 248 ~ 248 (265)
T PRK14252 248 F 248 (265)
T ss_pred H
Confidence 3
No 500
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=309.66 Aligned_cols=205 Identities=20% Similarity=0.229 Sum_probs=168.8
Q ss_pred CCeEEEEEEEEEEcCCCCeEeeeeeEEEeCCCEEEEECCCCCchHHHHHHHHcCCCC-----CccEEEECCc--------
Q psy10512 397 PPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTP-----SVGMVRKNSH-------- 463 (629)
Q Consensus 397 ~~~l~~~~l~~~y~~~~~~il~~vsl~i~~Ge~i~ivG~NGsGKSTLlk~l~G~~~p-----~~G~i~~~~~-------- 463 (629)
++.+.+++++++|++ ..+|+++||+|++|++++|+|+||||||||+++|+|+++| ++|+|.+++.
T Consensus 6 ~~~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 83 (261)
T PRK14263 6 PIVMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVD 83 (261)
T ss_pred CceEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccc
Confidence 467899999999953 3489999999999999999999999999999999999987 7999988763
Q ss_pred -----eeEEeeccchhcccCCCCCHHHHHhhcC--C--ChhhHHHHHHHHHHcCCCCc---ccccCcCcCChhHHHHHHH
Q psy10512 464 -----LRFARYHQHLHELLDLDISPLDYMLQSF--P--EVKDREEMRKIIGRYGLTGR---QQVCPIRQLSDGQKCRVVF 531 (629)
Q Consensus 464 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 531 (629)
..++|++|... + +..++.+++.... . .....+.+.++++.+++... ....++.+|||||+||++|
T Consensus 84 ~~~~~~~i~~v~q~~~--~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 84 PVVVRRYIGMVFQQPN--P-FSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hHhhhhceEEEecCCc--c-ccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHH
Confidence 13678887753 2 2467777764321 0 11224567889999998532 2235678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHhhc--CceEEEEecCHHHHHhhcCEEEEEe--------CCEEEEecCC
Q psy10512 532 AYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGGLVLVSHDFRLINQVAEEIWICE--------NGKVTKWEGN 601 (629)
Q Consensus 532 Aral~~~p~lLlLDEPT~~LD~~~~~~l~~~l~~~--~~~vi~vsHd~~~~~~~~d~i~~l~--------~G~i~~~~g~ 601 (629)
||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||+|++|+ +|+++. .|+
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~-~g~ 239 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVE-MGP 239 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEE-eCC
Confidence 99999999999999999999999999999999876 3589999999999999999999996 899975 677
Q ss_pred HHHHHH
Q psy10512 602 ILDYKE 607 (629)
Q Consensus 602 ~~~~~~ 607 (629)
.+++.+
T Consensus 240 ~~~~~~ 245 (261)
T PRK14263 240 TAQIFQ 245 (261)
T ss_pred HHHHHh
Confidence 776643
Done!