RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10512
(629 letters)
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 104 bits (261), Expect = 8e-26
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
I + +VSF+Y+D+ I +++ I+ +A VG +G GKSTL+NLI + G +
Sbjct: 17 IDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQIL 76
Query: 460 KN---------SHLRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLT 510
+ LR +L + + +L P D EE+ +
Sbjct: 77 IDGHNIKDFLTGSLRNQIGLVQQDNIL-FSDTVKENILLGRPTATD-EEVVEAAKMANAH 134
Query: 511 GRQQVCPI----------RQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALA 560
P +LS GQK R+ A + P +L+LDE T+ LD+E+ +
Sbjct: 135 DFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQ 194
Query: 561 DAINDFEGG--LVLVSHDFRLINQVAEEIWICENGKV 595
+A++ ++V+H I A++I + ENG +
Sbjct: 195 EALDVLSKDRTTLIVAHRLSTITH-ADKIVVIENGHI 230
Score = 87.9 bits (218), Expect = 5e-20
Identities = 52/266 (19%), Positives = 100/266 (37%), Gaps = 42/266 (15%)
Query: 77 GSLAVHPKSRDVKIANFSITFHGCE--LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLG 134
G+ + K + I + S ++ E +L+D L + G +G++G GKSTL+ ++
Sbjct: 6 GAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIP 65
Query: 135 NREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLM 194
I I + + +R + ++
Sbjct: 66 RFYDVTSGQILIDG-------------HNIKDFLTGSLR------NQIGLVQQDNILFSD 106
Query: 195 DIYD--RLDDISADTAEA-RAANILHGLGFTKEMQQK-------KTKDFSGGWRMRIALA 244
+ + L +A E AA + + F + Q + SGG + R+++A
Sbjct: 107 TVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIA 166
Query: 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYK--RILVIISHSQDFLNGVCTNIIHL 302
R P +L+LDE T+ LDL++ ++E L R +I++H + I+ +
Sbjct: 167 RIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT-HADKIVVI 225
Query: 303 DKRKLKYYGGNYEAFCKTRLELLENQ 328
+ + G T EL+ Q
Sbjct: 226 ENGHIVETG--------THRELIAKQ 243
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 102 bits (256), Expect = 2e-25
Identities = 56/216 (25%), Positives = 83/216 (38%), Gaps = 27/216 (12%)
Query: 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMV 458
V+ +Q+V+ L + L LVGPNGAGKSTLL + G +T G +
Sbjct: 3 VMQLQDVAEST------RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAG-MTSGKGSI 55
Query: 459 R---------KNSHLRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGL 509
+ + L R + + Y+ + E + + G L
Sbjct: 56 QFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALAL 115
Query: 510 TGRQQVCPIRQLSDGQKCRVVFA-------YLAWQAPHLLLLDEPTNHLDMETIDALADA 562
+ QLS G+ RV A A A LLLLDEP N LD+ AL
Sbjct: 116 DDKLGR-STNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKI 174
Query: 563 INDFEG---GLVLVSHDFRLINQVAEEIWICENGKV 595
++ +V+ SHD + A W+ + GK+
Sbjct: 175 LSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKM 210
Score = 76.9 bits (189), Expect = 2e-16
Identities = 49/226 (21%), Positives = 69/226 (30%), Gaps = 29/226 (12%)
Query: 108 LELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEV 167
E+ G L+G NG+GKSTLLA + I
Sbjct: 20 GEVRAGEILHLVGPNGAGKSTLLARMAGMT---SGKGSIQ----------------FAGQ 60
Query: 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQ 227
E KLA ++ ++ L D N + G +
Sbjct: 61 PLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALALDDKLG 120
Query: 228 KKTKDFSGGWRMRIALARALY-------VKPHLLLLDEPTNHLDLDACVWLEE---ELKT 277
+ T SGG R+ LA + LLLLDEP N LD+ L++ L
Sbjct: 121 RSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQ 180
Query: 278 YKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLE 323
+V+ SH + L K+ G E L
Sbjct: 181 QGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLA 226
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 102 bits (255), Expect = 6e-25
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 23/217 (10%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
+ +NV+F Y RN+ I +ALVG +G+GKST+ +LI G +
Sbjct: 14 LEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHIL 73
Query: 460 KNSH---------LRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLT 510
+ H LR + L D + + E RE++ +
Sbjct: 74 MDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAY-ARTEEYSREQIEEAARMAYAM 132
Query: 511 GRQQVCP----------IRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALA 560
LS GQ+ R+ A + +L+LDE T+ LD E+ A+
Sbjct: 133 DFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQ 192
Query: 561 DAINDFEGG--LVLVSHDFRLINQVAEEIWICENGKV 595
A+++ + ++++H I + A+EI + E+G +
Sbjct: 193 AALDELQKNRTSLVIAHRLSTI-EQADEIVVVEDGII 228
Score = 95.3 bits (237), Expect = 1e-22
Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 39/266 (14%)
Query: 76 TGSLAVHPKSRDVKIANFSITFHGCE--LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVL 133
G + + D++ N + T+ G E L++ L++ G+ L+G +GSGKST+ +++
Sbjct: 2 EGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLI 61
Query: 134 GNREVPVPDHIDI--FHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQE 191
HI + L AS ++ + V Q V +D
Sbjct: 62 TRFYDIDEGHILMDGHDLREYTLASLRNQVALVS--------------QNVHLFNDTVAN 107
Query: 192 QLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQ-------KKTKDFSGGWRMRIALA 244
+ Y R ++ S + E AA + + + F +M + SGG R RIA+A
Sbjct: 108 NI--AYARTEEYSREQIE-EAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIA 164
Query: 245 RALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYK--RILVIISHSQDFLNGVCTNIIHL 302
RAL +L+LDE T+ LD ++ ++ L + R ++I+H + I+ +
Sbjct: 165 RALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIE-QADEIVVV 223
Query: 303 DKRKLKYYGGNYEAFCKTRLELLENQ 328
+ + G T ELL
Sbjct: 224 EDGIIVERG--------THSELLAQH 241
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 101 bits (254), Expect = 6e-25
Identities = 41/229 (17%), Positives = 85/229 (37%), Gaps = 6/229 (2%)
Query: 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF 147
++ N F + L + +N G ++G NGSGKSTL+ V+ +
Sbjct: 5 LRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFE 64
Query: 148 HLTREMPASDKSALTCVMEVDEERVRLEKL--AEQLVACEDDESQEQLMDIYDRLDDISA 205
+ + ++ + L+++ E L+ E + L ++ +
Sbjct: 65 NKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKE 124
Query: 206 DTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDL 265
+ +A IL L + +K + SGG + + RAL P ++++DEP +
Sbjct: 125 EEMVEKAFKILEFLKL-SHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAP 183
Query: 266 DACVWLEEELKTYKRI---LVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311
+ + K +II H D + ++ + ++ G
Sbjct: 184 GLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEG 232
Score = 98.1 bits (244), Expect = 1e-23
Identities = 40/228 (17%), Positives = 84/228 (36%), Gaps = 34/228 (14%)
Query: 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMV 458
++ +N+ + + ++ ++GPNG+GKSTL+N+I G L G V
Sbjct: 4 ILRTENIVKYF--GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRV 61
Query: 459 ------------RKNSHLRFARYHQHLHELLDLDI----------------SPLDYMLQS 490
+ H R Q L ++ + + L Y
Sbjct: 62 YFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWI 121
Query: 491 FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNH 550
E + E+ KI+ L+ +LS GQ V P ++++DEP
Sbjct: 122 PKEEEMVEKAFKILEFLKLSHLYDR-KAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAG 180
Query: 551 LDMETIDALADAINDF--EG-GLVLVSHDFRLINQVAEEIWICENGKV 595
+ + + + + +G +++ H ++ + +++ NG++
Sbjct: 181 VAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQI 228
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 101 bits (253), Expect = 8e-25
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 13/234 (5%)
Query: 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF 147
V++ + F +++ LE+ G LLG +G GK+T L ++ E P I I
Sbjct: 4 VRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIG 63
Query: 148 HLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADT 207
P ++ + Q A + + +L +
Sbjct: 64 DKLVADPEKGIFVPPKDRDIA--------MVFQSYALYPHMTVYDNIAFPLKLRKVPRQE 115
Query: 208 AEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDA 267
+ R + LG T E+ +K ++ SGG R R+AL RA+ KP + L+DEP ++LD
Sbjct: 116 IDQRVREVAELLGLT-ELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKL 174
Query: 268 CVWLEEE----LKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317
V + E + + ++H Q + I +++ L+ G E +
Sbjct: 175 RVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVY 228
Score = 89.6 bits (222), Expect = 8e-21
Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 25/219 (11%)
Query: 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVG-- 456
+ + +V + + R + + + L+GP+G GK+T L +I G PS G
Sbjct: 3 GVRLVDVWKVFGEV--TAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 457 -----MVRKNSHLRFARYHQHLHELLDLDISPLDYM-----------LQSFPEVKDREEM 500
+V F ++ + +M L+ P + + +
Sbjct: 61 YIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 501 RKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMET---ID 557
R++ GLT P R+LS GQ+ RV + P + L+DEP ++LD + +
Sbjct: 121 REVAELLGLTELLNRKP-RELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMR 179
Query: 558 ALADAINDFEG-GLVLVSHDFRLINQVAEEIWICENGKV 595
A + G + V+HD + + I + G +
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVL 218
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 100 bits (250), Expect = 2e-24
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 20/233 (8%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
++V+++ R I + + F I+ L+GPNGAGK+T L +I + PS G+V
Sbjct: 3 VVVKDLRKRI--GKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVT 60
Query: 460 KNSHLRFARYHQHLHEL--------LDLDISPLDYM-----LQSFPEVKDREEMRKIIGR 506
H+ + ++ ++Y+ + + E + +
Sbjct: 61 VFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEI 120
Query: 507 YGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAI--- 563
GL + + + S G +++ A P L +LDEPT+ LD+ + +
Sbjct: 121 AGLGEKIK-DRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQA 179
Query: 564 NDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETLRAKVLKE 616
+ +++ SH+ + + + I + NG + G + + KE +A+ ++E
Sbjct: 180 SQEGLTILVSSHNMLEVEFLCDRIALIHNGTI-VETGTVEELKERYKAQNIEE 231
Score = 94.7 bits (235), Expect = 1e-22
Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 17/242 (7%)
Query: 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF 147
V + + E+L+ E+ G +GL+G NG+GK+T L ++ P + +F
Sbjct: 3 VVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVF 62
Query: 148 HLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADT 207
+ L + + + + + S+
Sbjct: 63 GKNVVEEPHEVRKLISYLP-------------EEAGAYRNMQGIEYLRFVAGFYASSSSE 109
Query: 208 AEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDA 267
E G E + + +S G ++ +ARAL V P L +LDEPT+ LD+
Sbjct: 110 IEEMVERATEIAGLG-EKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLN 168
Query: 268 CVWLEEELKTYKR---ILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLEL 324
+ + LK + +++ SH+ + +C I + + G E + + +
Sbjct: 169 AREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQN 228
Query: 325 LE 326
+E
Sbjct: 229 IE 230
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 101 bits (252), Expect = 2e-24
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 8/200 (4%)
Query: 403 QNVSFRY-SDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKN 461
NVSF + G + +N+ I+ LA+ G G+GK++LL LI G+L S G+++ +
Sbjct: 37 NNVSFSHLCLVGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHS 96
Query: 462 SHLRFARYHQHL--HELLDLDISPLDYMLQSFPEVKDR-EEMRKIIGRYGLTGRQQVCPI 518
+ F + + + I + Y + V + + I
Sbjct: 97 GRVSFCSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLQQDITKFAEQDNTVLGEGG 156
Query: 519 RQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGG---LVLVSH 575
LS GQ+ R+ A ++ L LLD P +LD+ T + + ++ +LV+
Sbjct: 157 VTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTS 216
Query: 576 DFRLINQVAEEIWICENGKV 595
+ + A++I I G
Sbjct: 217 KMEHL-RKADKILILHQGSS 235
Score = 88.8 bits (220), Expect = 4e-20
Identities = 48/259 (18%), Positives = 90/259 (34%), Gaps = 43/259 (16%)
Query: 63 EADAKLNAEARACTGSLAVHPKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLN 122
E +L + + G +V ++ G +L++ L + G + G
Sbjct: 14 EGFGELLEKVQQSNGDRKHSSDENNVSFSHLC--LVGNPVLKNINLNIEKGEMLAITGST 71
Query: 123 GSGKSTLLAVLGNREVPVPDHIDI-------FHLTREMPASDKSALTCVMEVDEERVRLE 175
GSGK++LL ++ I + MP + K + + DE R +
Sbjct: 72 GSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSYDEYRYK-- 129
Query: 176 KLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSG 235
+ AC+ + + + + + + SG
Sbjct: 130 ---SVVKACQLQQDITKFAEQDNTVLG-------------------------EGGVTLSG 161
Query: 236 GWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEEL---KTYKRILVIISHSQDFL 292
G R RI+LARA+Y L LLD P +LD+ + E + ++++ + L
Sbjct: 162 GQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTSKMEHL 221
Query: 293 NGVCTNIIHLDKRKLKYYG 311
I+ L + +YG
Sbjct: 222 R-KADKILILHQGSSYFYG 239
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 99.2 bits (247), Expect = 4e-24
Identities = 49/215 (22%), Positives = 77/215 (35%), Gaps = 20/215 (9%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
I +N+ FRY D P I N+ I + +VG +G+GKSTL LI P G V
Sbjct: 2 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVL 61
Query: 460 -----------KNSHLRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRK------ 502
+ Q L I + K +
Sbjct: 62 IDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDF 121
Query: 503 IIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADA 562
I LS GQ+ R+ A P +L+ DE T+ LD E+ +
Sbjct: 122 ISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRN 181
Query: 563 INDFEGGL--VLVSHDFRLINQVAEEIWICENGKV 595
++ G ++++H + + A+ I + E GK+
Sbjct: 182 MHKICKGRTVIIIAHRLSTV-KNADRIIVMEKGKI 215
Score = 76.5 bits (188), Expect = 3e-16
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 24/246 (9%)
Query: 87 DVKIANFSITFHGCE--LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHI 144
D+ N + +L + L + G G++G +GSGKSTL ++ R P++
Sbjct: 1 DITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLI-QRFYI-PENG 58
Query: 145 DIFHLTREMPASDKSALT-CVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDI 203
+ ++ +D + L V V ++ V L + ++ + + + +L
Sbjct: 59 QVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKL--- 115
Query: 204 SADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHL 263
A A G+ + ++ SGG R RIA+ARAL P +L+ DE T+ L
Sbjct: 116 ----AGAHDFISELREGY-NTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSAL 170
Query: 264 DLDACVWLEEELKTYK--RILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTR 321
D ++ + + R ++II+H + II ++K K+ G
Sbjct: 171 DYESEHVIMRNMHKICKGRTVIIIAHRLSTVK-NADRIIVMEKGKIVEQG--------KH 221
Query: 322 LELLEN 327
ELL
Sbjct: 222 KELLSE 227
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 98.4 bits (245), Expect = 8e-24
Identities = 43/217 (19%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMV 458
++ ++V F Y DD I R++ F ++ +A GP+G GKST+ +L+ P+ G +
Sbjct: 1 MLSARHVDFAY-DDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEI 59
Query: 459 RKN----SHLRFARYHQHL----HELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLT 510
+ ++ + + + + + + + E++ +++
Sbjct: 60 TIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFAR 119
Query: 511 GRQQVCPIR----------QLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALA 560
+ P + ++S GQ+ R+ A + P +L+LDE T LD E+ +
Sbjct: 120 SFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQ 179
Query: 561 DAINDFEGG--LVLVSHDFRLINQVAEEIWICENGKV 595
A++ G ++++H I A++I+ E G++
Sbjct: 180 KALDSLMKGRTTLVIAHRLSTIVD-ADKIYFIEKGQI 215
Score = 82.2 bits (203), Expect = 3e-18
Identities = 48/235 (20%), Positives = 86/235 (36%), Gaps = 29/235 (12%)
Query: 101 ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPD---HIDIFHLTREMPASD 157
++L+D E G +G GKST+ ++L R ID + +
Sbjct: 16 QILRDISFEAQPNSIIAFAGPSGGGKSTIFSLL-ERFYQPTAGEITIDGQPIDNISLENW 74
Query: 158 KSALTCVMEVDE--ERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANI 215
+S + V + E L L DE Q++D+ +
Sbjct: 75 RSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVE----------- 123
Query: 216 LHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEEL 275
+ ++ SGG R R+A+ARA P +L+LDE T LD ++ +++ L
Sbjct: 124 -NMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKAL 182
Query: 276 KTYK--RILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLELLENQ 328
+ R ++I+H + I ++K ++ G EL+
Sbjct: 183 DSLMKGRTTLVIAHRLSTIV-DADKIYFIEKGQITGSG--------KHNELVATH 228
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 98.3 bits (245), Expect = 9e-24
Identities = 52/235 (22%), Positives = 90/235 (38%), Gaps = 19/235 (8%)
Query: 87 DVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDI 146
+VK+ N + F + L + G LLG +G GK+T L ++ E P I
Sbjct: 6 EVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYF 65
Query: 147 FHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISAD 206
++ V Q A + + + ++ D
Sbjct: 66 GDRDVTYLPPKDRNISMVF--------------QSYAVWPHMTVYENIAFPLKIKKFPKD 111
Query: 207 TAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLD 266
+ R L E+ + SGG R R+A+ARA+ V+P +LL+DEP ++LD
Sbjct: 112 EIDKRVRWAAELLQIE-ELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAK 170
Query: 267 ACVWLEEELK----TYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317
V + E+K K + ++H Q + I +++ +L G E +
Sbjct: 171 LRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVY 225
Score = 93.3 bits (232), Expect = 5e-22
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 21/213 (9%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMV- 458
+ ++N++ R+ + L I L L+GP+G GK+T L +I G P+ G +
Sbjct: 7 VKLENLTKRFGNF--TAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIY 64
Query: 459 ---RKNSHLRFARYH-----QHLHELLDLDISP---LDYMLQSFPEVKDREEMRKIIGRY 507
R ++L + Q + + ++ FP+ + + +R
Sbjct: 65 FGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELL 124
Query: 508 GLTGRQQVCPIRQLSDGQKCRVVFAY-LAWQAPHLLLLDEPTNHLDMETIDALADAIND- 565
+ P QLS GQ+ RV A + + P +LL+DEP ++LD + A+ I
Sbjct: 125 QIEELLNRYP-AQLSGGQRQRVAVARAIVVE-PDVLLMDEPLSNLDAKLRVAMRAEIKKL 182
Query: 566 -FEGGL--VLVSHDFRLINQVAEEIWICENGKV 595
+ + + V+HD + + I + G++
Sbjct: 183 QQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQL 215
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 96.4 bits (240), Expect = 6e-23
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Query: 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF 147
+ + + + G E+L+ L+ G ++G +GSGKST L + E P I I
Sbjct: 3 LHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAI-IV 61
Query: 148 HLTREMPASDKSALTCVMEVDEERVRLEKLA--EQLVACEDDES-QEQLMDIYDRLDDIS 204
+ DK V + ++ R+ +L Q + E +M+ ++ +S
Sbjct: 62 NGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLS 121
Query: 205 ADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 264
A RA L +G + Q K SGG + R+++ARAL ++P +LL DEPT+ LD
Sbjct: 122 KHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALD 181
Query: 265 LDACVWLEEELKTYKRI---LVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311
+ + ++ +V+++H F V +++I L + K++ G
Sbjct: 182 PELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEG 231
Score = 86.0 bits (213), Expect = 2e-19
Identities = 51/227 (22%), Positives = 87/227 (38%), Gaps = 33/227 (14%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
+ V ++ RY G + + + ++++G +G+GKST L I PS G +
Sbjct: 3 LHVIDLHKRY--GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAII 60
Query: 460 -------------------KNSHLRFARYH-----QHLHELLDL----DISPLDYMLQSF 491
+ LR R QH + + ++ +
Sbjct: 61 VNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL 120
Query: 492 PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHL 551
+ RE K + + G+ R Q LS GQ+ RV A P +LL DEPT+ L
Sbjct: 121 SKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSAL 180
Query: 552 DMETIDALADAINDF--EG-GLVLVSHDFRLINQVAEEIWICENGKV 595
D E + + + EG +V+V+H+ V+ + GK+
Sbjct: 181 DPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 227
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 94.2 bits (234), Expect = 1e-22
Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 16/196 (8%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
+ ++++S Y D P + + I+ + GPNG GK+TLL I L P G +
Sbjct: 3 LEIRDLSVGY--DKP-VLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEII 59
Query: 460 KNSH------LRFARYHQHLHELLDLDISP-LDYMLQSFPEVKDREEMRKIIGRYGLTGR 512
N + + + + + L + + ++ E+ + +
Sbjct: 60 YNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDL 119
Query: 513 QQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDF--EGG- 569
++ + +LS G RV A + +LD+P +D ++ + +I + E G
Sbjct: 120 KK--KLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGI 177
Query: 570 -LVLVSHDFRLINQVA 584
++ + +
Sbjct: 178 VIISSREELSYCDVNE 193
Score = 76.1 bits (187), Expect = 2e-16
Identities = 41/218 (18%), Positives = 81/218 (37%), Gaps = 26/218 (11%)
Query: 89 KIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH 148
+I + S+ + +L+ + + G G NG GK+TLL + P+ I
Sbjct: 4 EIRDLSVGY-DKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNG 62
Query: 149 LTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTA 208
+ L + V + + L ++ ++MD + ++
Sbjct: 63 VPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVE------- 115
Query: 209 EARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDAC 268
+L +KK + S G R+ LA L V + +LD+P +D D+
Sbjct: 116 ------VLD--------LKKKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSK 161
Query: 269 VWLEEELKTY--KRILVIISHSQDFLNGVCTNIIHLDK 304
+ + + ++ +VIIS ++ C +L K
Sbjct: 162 HKVLKSILEILKEKGIVIISSREEL--SYCDVNENLHK 197
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 93.1 bits (231), Expect = 6e-22
Identities = 43/243 (17%), Positives = 90/243 (37%), Gaps = 23/243 (9%)
Query: 89 KIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH 148
++ + + + ++ L++ G+ L+G NG+GK+T L+ + I
Sbjct: 8 EVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNG 67
Query: 149 LTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTA 208
+ + V E R +L + +M Y+R D
Sbjct: 68 QDITNKPAHVINRMGIALVPEGRRIFPELTVY---------ENLMMGAYNRKDKEGIKRD 118
Query: 209 EARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD---L 265
++ L KE ++ SGG + +A+ RAL +P LL++DEP+ L +
Sbjct: 119 LEWIFSLFPRL---KERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILV 175
Query: 266 DACVWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAFCKTRLELL 325
+ +++ ++++ + V L+ ++ G ELL
Sbjct: 176 SEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEG--------KASELL 227
Query: 326 ENQ 328
+N+
Sbjct: 228 DNE 230
Score = 90.0 bits (223), Expect = 7e-21
Identities = 41/216 (18%), Positives = 85/216 (39%), Gaps = 21/216 (9%)
Query: 398 PVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGM 457
V+ VQ++ Y + ++ + + L+G NGAGK+T L+ I G + G
Sbjct: 5 IVLEVQSLHVYY--GAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGK 62
Query: 458 VRKNSHLRFARYHQHLHELLDLDISP----------LDYMLQSFPEVKDREEMRKIIGRY 507
+ N + ++ + + + ++ KD+E +++ +
Sbjct: 63 IIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWI 122
Query: 508 -----GLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETIDALADA 562
L R + LS G++ + P LL++DEP+ L + + +
Sbjct: 123 FSLFPRLKERLKQ-LGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEV 181
Query: 563 INDF--EG-GLVLVSHDFRLINQVAEEIWICENGKV 595
I EG ++LV + +VA ++ E G++
Sbjct: 182 IQKINQEGTTILLVEQNALGALKVAHYGYVLETGQI 217
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 92.3 bits (229), Expect = 1e-21
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 19/228 (8%)
Query: 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF 147
V++ N + + + +D L+++ G +G +G GKSTLL ++ E + I
Sbjct: 1 VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIG 60
Query: 148 HLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADT 207
E +D + + Q A S + M +L +
Sbjct: 61 ----EKRMNDTPPAERGVGMV----------FQSYALYPHLSVAENMSFGLKLAGAKKEV 106
Query: 208 AEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDA 267
R + L + +K K SGG R R+A+ R L +P + LLDEP ++LD
Sbjct: 107 INQRVNQVAEVLQLA-HLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAAL 165
Query: 268 CVWLEEE----LKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311
V + E K R ++ ++H Q + I+ LD ++ G
Sbjct: 166 RVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVG 213
Score = 86.2 bits (213), Expect = 1e-19
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 19/212 (8%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
+ +QNV+ + + + +++ I + VGP+G GKSTLL +I G T + G +
Sbjct: 1 VQLQNVTKAWGEV--VVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF 58
Query: 460 ---------KNSHLRFARYHQHLH---ELLDLDISPLDYMLQSFPEVKDREEMRKIIGRY 507
+ Q L + L + + + ++
Sbjct: 59 IGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVL 118
Query: 508 GLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMET---IDALADAIN 564
L P + LS GQ+ RV P + LLDEP ++LD + ++
Sbjct: 119 QLAHLLDRKP-KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH 177
Query: 565 DFEGGLV-LVSHDFRLINQVAEEIWICENGKV 595
G + V+HD +A++I + + G+V
Sbjct: 178 KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRV 209
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 90.7 bits (225), Expect = 3e-21
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 400 IMVQNVSFRYSDDGPWIY--RNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGM 457
I ++NV+ Y IY +N+ I ++++GP+G+GKST+LN+I P+ G
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61
Query: 458 VR---------KNSHLRFARYHQ------------HLHELLDLDISPLDYMLQSFPEVKD 496
V + L R + L L ++++ + + +
Sbjct: 62 VYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEER 121
Query: 497 REEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLDMETI 556
R+ + + L R QLS GQ+ RV A P ++L D+PT LD +T
Sbjct: 122 RKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTG 181
Query: 557 DALADAINDF--EGG--LVLVSHDFRLINQVAEEIWICENGKVTKWEGNI 602
+ + + E G +V+V+HD + + E I ++G+V + E +
Sbjct: 182 EKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEV-EREEKL 229
Score = 90.3 bits (224), Expect = 4e-21
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 16/233 (6%)
Query: 88 VKIANFSITFHGCEL----LQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDH 143
+K+ N + T+ E L++ L + G ++G +GSGKST+L ++G + P
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKP--TE 59
Query: 144 IDIFHLTREMPASDKSALTCVMEVDEERVRLE-KLAEQLVACEDDESQEQLMDIYDRLDD 202
+++ + D LT + V + L L A E +L I+
Sbjct: 60 GEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALE----NVELPLIFKYRGA 115
Query: 203 ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNH 262
+S + RA L + K SGG + R+A+ARAL P ++L D+PT
Sbjct: 116 MSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGA 175
Query: 263 LDLDACVWLEEELKTYKRIL----VIISHSQDFLNGVCTNIIHLDKRKLKYYG 311
LD + + LK V+++H + II+L +++
Sbjct: 176 LDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDGEVEREE 227
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 90.5 bits (224), Expect = 4e-21
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 400 IMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
I+V+NVS + N+ I+ R ++GP+GAGK+T + +I G PS G +
Sbjct: 4 IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELY 63
Query: 460 ----------KNSHLRFARYHQHLHELLDL-------DISPLDYMLQSFPEVKDREEMRK 502
K R + + L + + + R+ + +
Sbjct: 64 FDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEE 123
Query: 503 IIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLD---METIDAL 559
+ + P R+LS Q+ RV A + P LLLLDEP ++LD ++ AL
Sbjct: 124 VAKILDIHHVLNHFP-RELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARAL 182
Query: 560 ADAINDFEGG-LVLVSHDFRLINQVAEEIWICENGKV 595
+ G L++VSHD I +A+ + + GK+
Sbjct: 183 VKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKL 219
Score = 77.0 bits (189), Expect = 2e-16
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 16/236 (6%)
Query: 88 VKIANFSITFHGCEL--LQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHID 145
+ + N S F ++ L + + + G R+G+LG +G+GK+T + ++ + VP +
Sbjct: 4 IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLD--VPSTGE 61
Query: 146 IFHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISA 205
++ R + ++ K + R + Q A + + + + +S
Sbjct: 62 LYFDDRLVASNGK-------LIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSK 114
Query: 206 DTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDL 265
+ R + L + ++ SG + R+ALARAL P LLLLDEP ++LD
Sbjct: 115 EEIRKRVEEVAKILDIH-HVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDA 173
Query: 266 DACVWLEEE----LKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317
L+++SH + + + L K KL G + +
Sbjct: 174 RMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLY 229
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 86.5 bits (214), Expect = 1e-19
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 20/239 (8%)
Query: 88 VKIANFSITFHG----CELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDH 143
+K++N + FH + L + L + G+ YG++G +G+GKSTL+ + E P
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 144 IDIFHLTREMPASDKSALTCVMEVDEERVRLE-KLAEQLVACEDDESQEQLMDIYDRLDD 202
+ + D LT + E + + R + + Q + + + LD+
Sbjct: 62 VLV----------DGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDN 111
Query: 203 ISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNH 262
D + R +L +G + + SGG + R+A+ARAL P +LL DE T+
Sbjct: 112 TPKDEVKRRVTELLSLVGLG-DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSA 170
Query: 263 LDLDAC----VWLEEELKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYGGNYEAF 317
LD L++ + +++I+H D + +C + + +L E F
Sbjct: 171 LDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVF 229
Score = 85.3 bits (211), Expect = 3e-19
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 400 IMVQNVSFRYSDDGPWIY--RNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGM 457
I + N++ + I N+ + ++G +GAGKSTL+ + P+ G
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 458 VR------------KNSHLR--FARYHQHLHELLDLDISPLDYM-----LQSFPEVKDRE 498
V + + R QH + L + + L + P+ + +
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFN--LLSSRTVFGNVALPLELDNTPKDEVKR 119
Query: 499 EMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLD---MET 555
+ +++ GL + P LS GQK RV A P +LL DE T+ LD +
Sbjct: 120 RVTELLSLVGLGDKHDSYP-SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRS 178
Query: 556 IDALADAINDFEG-GLVLVSHDFRLINQVAEEIWICENGKV 595
I L IN G ++L++H+ ++ ++ + + + NG++
Sbjct: 179 ILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGEL 219
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 81.9 bits (202), Expect = 5e-18
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 28/230 (12%)
Query: 393 GKIPPP----VIMVQNVSFRYSD-DGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLI 447
G + P ++ Q+VSF Y + + + L F + ALVGPNG+GKST+ L+
Sbjct: 1 GLLTPLHLEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALL 60
Query: 448 YGDLTPSVGMVR---------KNSHLR--FARYHQHLHELLDLDISPLDYMLQSFPEVKD 496
P+ G + ++ +L A Q + Y L P +++
Sbjct: 61 QNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEE 120
Query: 497 REEMRKIIGRYGLT-----GRQQVC--PIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549
G + G QLS GQ+ V A + P +L+LD+ T+
Sbjct: 121 ITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATS 180
Query: 550 HLDMET----IDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKV 595
LD + L ++ + ++L++ L+ + A+ I E G +
Sbjct: 181 ALDANSQLQVEQLLYESPERYSRSVLLITQHLSLV-EQADHILFLEGGAI 229
Score = 79.6 bits (196), Expect = 3e-17
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 32/263 (12%)
Query: 77 GSLAVHPKSRDVKIANFSITFHGCE---LLQDTMLELNCGRRYGLLGLNGSGKSTLLAVL 133
G L V+ + S + +LQ L G L+G NGSGKST+ A+L
Sbjct: 1 GLLTPLHLEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALL 60
Query: 134 GNREVPVPDH---IDIFHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQ 190
+D L + + V + Q+ E+
Sbjct: 61 -QNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEP-----------QVFGRSLQENI 108
Query: 191 EQLMDIYDRLDDISADTAEARAANILHGL-GFTKEMQQKKTKDFSGGWRMRIALARALYV 249
+ +++I+A ++ A + + GL + SGG R +ALARAL
Sbjct: 109 AYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIR 168
Query: 250 KPHLLLLDEPTNHLDLDACVWLEEEL----KTYKRILVIISHSQDFLNGVCTNIIHLDKR 305
KP +L+LD+ T+ LD ++ + +E+ L + Y R +++I+ + +I+ L+
Sbjct: 169 KPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVE-QADHILFLEGG 227
Query: 306 KLKYYGGNYEAFCKTRLELLENQ 328
++ G T +L+E +
Sbjct: 228 AIREGG--------THQQLMEKK 242
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 77.0 bits (188), Expect = 6e-17
Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 15/169 (8%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYML 488
++ + G G GK+TL+ I L + ++ +
Sbjct: 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEG------- 54
Query: 489 QSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPT 548
+ +K++G YG+ + + ++++DE
Sbjct: 55 KKKIFSSKFFTSKKLVGSYGVN-----VQYFEELAIPILERAYREAKKDRRKVIIIDEIG 109
Query: 549 NHLDM--ETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKV 595
+ D + ++D +V R ++ + +EI +
Sbjct: 110 KMELFSKKFRDLVRQIMHDPNVNVVATIPI-RDVHPLVKEIRRLPGAVL 157
Score = 48.8 bits (115), Expect = 2e-07
Identities = 24/215 (11%), Positives = 48/215 (22%), Gaps = 42/215 (19%)
Query: 115 RYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRL 174
+ + G G GK+TL+ + V
Sbjct: 2 KIIITGEPGVGKTTLVKKI--------------------------------------VER 23
Query: 175 EKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFS 234
E+ E R+ + + +
Sbjct: 24 LGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEEL 83
Query: 235 GGWRMRIALARALYVKPHLLLLDEPTNHLDLDACV--WLEEELKTYKRILVIISHSQDFL 292
+ A A + ++++DE + + + +V +D
Sbjct: 84 AIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVH 143
Query: 293 NGVCTNIIHLDKRKLKYYG-GNYEAFCKTRLELLE 326
+ I L L N + + L LLE
Sbjct: 144 P-LVKEIRRLPGAVLIELTPENRDVILEDILSLLE 177
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 76.3 bits (187), Expect = 3e-16
Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 17/210 (8%)
Query: 399 VIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMV 458
+I ++++S ++ + NL ++ ++GP GAGK+ L LI G P G +
Sbjct: 1 MIEIESLSRKW---KNFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRI 57
Query: 459 RKNSHLR---------FARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGL 509
+ A +Q+ +++ ++KD + + +
Sbjct: 58 LLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKI 117
Query: 510 TGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHLD---METIDALADAINDF 566
P LS G++ RV A P +LLLDEP + LD E + ++
Sbjct: 118 EHLLDRNP-LTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKK 176
Query: 567 EG-GLVLVSHDFRLINQVAEEIWICENGKV 595
++ ++HD +A+ I + +GK+
Sbjct: 177 NKLTVLHITHDQTEARIMADRIAVVMDGKL 206
Score = 68.2 bits (166), Expect = 2e-13
Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 23/228 (10%)
Query: 88 VKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIF 147
++I + S + L + L++ G + +LG G+GK+ L ++ VP I +
Sbjct: 2 IEIESLSRKW-KNFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLD 60
Query: 148 HLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADT 207
V ++ E+ Q + + ++ ++ R+ I
Sbjct: 61 G-------------KDVTDLSPEK-HDIAFVYQNYSLFPHMNVKKNLEFGMRMKKI---K 103
Query: 208 AEARAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDA 267
R + L + + + SGG + R+ALARAL P +LLLDEP + LD
Sbjct: 104 DPKRVLDTARDLKI-EHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRT 162
Query: 268 CVWLEEELKTYKRIL----VIISHSQDFLNGVCTNIIHLDKRKLKYYG 311
E L + + I+H Q + I + KL G
Sbjct: 163 QENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVG 210
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 73.1 bits (179), Expect = 4e-15
Identities = 53/194 (27%), Positives = 77/194 (39%), Gaps = 22/194 (11%)
Query: 419 NLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKN----SHLRFAR------ 468
N++F + D L+GP GAGKS L LI G + P G VR N + L R
Sbjct: 17 NVDFEMGRDY-CVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFV 75
Query: 469 --YHQHLHELLDLDISPLDYMLQSFPEVKDR-EEMRKIIGRYGLTGRQQVCPIRQLSDGQ 525
+ L E R EM + +G L R +LS G+
Sbjct: 76 PQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDR----KPARLSGGE 131
Query: 526 KCRVVFAYLAWQAPHLLLLDEPTNHLD---METIDALADAINDFEGGLVL-VSHDFRLIN 581
+ RV A P LLLLDEP + +D + + +L V+HD
Sbjct: 132 RQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAA 191
Query: 582 QVAEEIWICENGKV 595
+A+E+ + NG++
Sbjct: 192 MLADEVAVMLNGRI 205
Score = 58.5 bits (141), Expect = 3e-10
Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 37/225 (16%)
Query: 107 MLELNCGRRYG----------------LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLT 150
L++ +R G LLG G+GKS L ++ P + +
Sbjct: 2 FLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGAD 61
Query: 151 REMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEA 210
++ + V + L + +
Sbjct: 62 ITPLPPERRGIGFVPQ-----------DYALFPHLSVYRNIAYGLRN-----VERVERDR 105
Query: 211 RAANILHGLGFTKEMQQKKTKDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVW 270
R + LG + +K SGG R R+ALARAL ++P LLLLDEP + +DL
Sbjct: 106 RVREMAEKLGIA-HLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGV 164
Query: 271 LEEE----LKTYKRILVIISHSQDFLNGVCTNIIHLDKRKLKYYG 311
L EE + + ++ ++H + + + ++ G
Sbjct: 165 LMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKG 209
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 67.9 bits (164), Expect = 4e-13
Identities = 36/243 (14%), Positives = 79/243 (32%), Gaps = 11/243 (4%)
Query: 73 RACTGSLAVHPKSRDVKIANFSITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLLAV 132
A L + +D+K F+ + + R L G + A+
Sbjct: 41 DAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAM 100
Query: 133 LGNR-EVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKLAEQLVACEDDESQE 191
+ + + +++ + E + E
Sbjct: 101 KRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILESAREAALSKIGE 160
Query: 192 QLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRMRI------ALAR 245
+I+ + RA L E +++ SGG R+ + A++
Sbjct: 161 LASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSL 220
Query: 246 ALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKR---ILVIISHSQDFLNGVCTNIIHL 302
L + LL+LDEPT +LD + L ++ Y + ++++SH ++ + ++I +
Sbjct: 221 YLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKD-AADHVIRI 279
Query: 303 DKR 305
Sbjct: 280 SLE 282
Score = 53.6 bits (127), Expect = 2e-08
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 510 TGRQQVCPIRQLSDGQKCRVVFAYLAWQA------PHLLLLDEPTNHLDMETIDALADAI 563
+ P+ LS G++ + A+ + LL+LDEPT +LD E L +
Sbjct: 191 VWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIM 250
Query: 564 NDFEG---GLVLVSHDFRLINQVAEEIWICENGKVTKWE 599
+ ++LVSHD L + I I +K E
Sbjct: 251 ERYLKKIPQVILVSHDEELKDAADHVIRISLENGSSKVE 289
Score = 42.1 bits (97), Expect = 1e-04
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 417 YRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
+ + + ++G NG+GKS+LL+ I L + + + +
Sbjct: 14 HSDTVVEFK-EGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTY 70
Score = 33.2 bits (74), Expect = 0.075
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 94 SITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLL 130
+T DT++E G ++G NGSGKS+LL
Sbjct: 5 RVTVKNFRSHSDTVVEFKEGI-NLIIGQNGSGKSSLL 40
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 62.2 bits (149), Expect = 6e-11
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRI---LVIISHSQ 289
+ G R+A++ L + LL+LDEPT +LD + L ++ Y + ++++SH +
Sbjct: 285 IALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDE 344
Query: 290 DFLNGVCTNIIHLDKR 305
+ + ++I +
Sbjct: 345 ELKD-AADHVIRISLE 359
Score = 53.7 bits (127), Expect = 3e-08
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 514 QVCPIRQLSDGQKCRVVFAYLAWQA------PHLLLLDEPTNHLDMETIDALADAINDFE 567
+ P+ LS G++ + A+ + LL+LDEPT +LD E L + +
Sbjct: 272 KERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYL 331
Query: 568 ---GGLVLVSHDFRLINQVAEEIWICENGKVTKWE 599
++LVSHD L + I I +K E
Sbjct: 332 KKIPQVILVSHDEELKDAADHVIRISLENGSSKVE 366
Score = 37.9 bits (86), Expect = 0.003
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 417 YRNLEFGIDLDTRL-ALVGPNGAGKSTLLNLIY 448
+ + ++ + ++G NG+GKS+LL+ I
Sbjct: 14 HSDTV--VEFKEGINLIIGQNGSGKSSLLDAIL 44
Score = 30.6 bits (67), Expect = 0.64
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 94 SITFHGCELLQDTMLELNCGRRYGLLGLNGSGKSTLL 130
+T DT++E G ++G NGSGKS+LL
Sbjct: 5 RVTVKNFRSHSDTVVEFKEGI-NLIIGQNGSGKSSLL 40
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 37.7 bits (86), Expect = 0.003
Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 424 IDLDTRL-ALVGPNGAGKSTLL---NLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479
I R+ A+VGPNG+GKS ++ ++G+ + +R +
Sbjct: 20 IGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKK--ELRASEKFDMIFAGSENLPPAGS 77
Query: 480 DISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQ 520
L + RE R Y L G +
Sbjct: 78 AYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIR 118
Score = 27.7 bits (60), Expect = 4.4
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 4/23 (17%)
Query: 118 LLGLNGSGKSTLLA----VLGNR 136
++G NGSGKS ++ V G +
Sbjct: 29 IVGPNGSGKSNIIDAIKWVFGEQ 51
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 37.3 bits (85), Expect = 0.004
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 417 YRNLEFGIDLDTRL-ALVGPNGAGKSTLLNLIY---GDLTPSVGMVRKNSHLRFARYHQH 472
Y N + I A+VG NG+GKS + + I G L+ + S L FA
Sbjct: 15 YGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRISDLIFAGSKNE 74
Query: 473 LHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYG 508
+ + FP +D +R+ + G
Sbjct: 75 PPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDG 110
Score = 26.9 bits (58), Expect = 9.1
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 118 LLGLNGSGKSTLLA----VLGNR 136
++G NGSGKS + VLG
Sbjct: 31 IVGANGSGKSNIGDAILFVLGGL 53
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 34.7 bits (78), Expect = 0.016
Identities = 17/148 (11%), Positives = 45/148 (30%), Gaps = 2/148 (1%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYML 488
+L +G + AGK+TLL+++ D ++ + A + +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLW 61
Query: 489 QSFPEVKDREEMRKIIGR--YGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDE 546
+ + + R ++ + +++ + V AP+ + E
Sbjct: 62 KDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAE 121
Query: 547 PTNHLDMETIDALADAINDFEGGLVLVS 574
+ L + + + S
Sbjct: 122 LRSALGLLNTTGSQRIEGQRPVEVFMCS 149
Score = 27.0 bits (58), Expect = 4.9
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEER 171
LGL+ +GK+TLL +L N + +H T E A T +
Sbjct: 5 FLGLDNAGKTTLLHMLKNDR--LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 56
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 34.6 bits (78), Expect = 0.016
Identities = 23/166 (13%), Positives = 46/166 (27%), Gaps = 26/166 (15%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPS--VGMVRKNSHLRFARYHQ------HLHELLDLDI 481
LA +G GK+TLL + L + K++H I
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 482 SPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL 541
E D EE+ + + + + ++ + +
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRP 124
Query: 542 L---------------LLDEPTNHLDMETIDALADAINDF---EGG 569
L+ LD+ ++ LAD + ++ + G
Sbjct: 125 EELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQNG 170
Score = 27.6 bits (60), Expect = 3.3
Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 15/168 (8%)
Query: 117 GLLGLNGSGKSTLL----AVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERV 172
+G+GK+TLL L R + H S + V
Sbjct: 6 AFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIV 65
Query: 173 RLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKD 232
++Q A + E+ +D+ + + K + +
Sbjct: 66 ----ASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAG 121
Query: 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHL-DLDACV-----WLEEE 274
+ A+ L LD + D++ W++++
Sbjct: 122 HRPEELVIDRHVIAV-ASDVPLNLDVALLDINDVEGLADFVVEWMQKQ 168
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 34.6 bits (78), Expect = 0.021
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 424 IDLDTRL-ALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDIS 482
DLD + L G NGAGKST + L P + ++ + + L +
Sbjct: 20 FDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLK 79
Query: 483 PLDYMLQSFPEVKDREEMRKIIGR 506
S + + R ++G
Sbjct: 80 AGVC--YSMLDTINSRHQRVVVGV 101
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 34.3 bits (77), Expect = 0.038
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 8/121 (6%)
Query: 463 HLRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLS 522
++ L + + ++ E +D E I + ++ + LS
Sbjct: 276 SDHLDAIYRELTKNPNSNVELAGGNASLTIEDED-EPFNAGIKYHATPPLKRFKDMEYLS 334
Query: 523 DGQKCRV----VFAYLAWQAPHLLLLDEPTNHLDMETIDALADAINDFEGG---LVLVSH 575
G+K +FA ++Q +LDE LD+ + +A I +++S
Sbjct: 335 GGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISL 394
Query: 576 D 576
Sbjct: 395 K 395
Score = 32.8 bits (73), Expect = 0.14
Identities = 7/14 (50%), Positives = 13/14 (92%)
Query: 431 ALVGPNGAGKSTLL 444
+++GPNG+GKS ++
Sbjct: 29 SIIGPNGSGKSNMM 42
Score = 29.7 bits (65), Expect = 1.1
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 231 KDFSGGWRMRIAL----ARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRI---LV 283
+ SGG + AL A Y +LDE LD+ + ++ ++ +
Sbjct: 331 EYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFI 390
Query: 284 IISHSQDFLN 293
+IS
Sbjct: 391 VISLKNTMFE 400
Score = 28.1 bits (61), Expect = 3.1
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 106 TMLELNCGRRYGLLGLNGSGKSTLLA----VLGNR 136
T + ++G NGSGKS ++ VLG R
Sbjct: 18 TKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVR 52
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain
{Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Length = 267
Score = 33.7 bits (77), Expect = 0.054
Identities = 22/191 (11%), Positives = 48/191 (25%), Gaps = 29/191 (15%)
Query: 326 ENQMKQYNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLAKMVNQGLTDKVTTDKTV 385
E Q Q + +YI+ + ++ Q K + ++ T +
Sbjct: 16 EKQWIQEDQA--------SYISF--NAASNSRSQI----KAALDNAGKIMSLTKTAPDYL 61
Query: 386 TFTFPSCGKIPPPVIMV---QNVSFRYSDDGPWIYRNLEFGIDLDTRLALVGPNGAGKST 442
P + + +Y+ + L GP GK+
Sbjct: 62 VGQQPVEDISSNRIYKILELNGYDPQYAAS--VFLGWATKKFGKRNTIWLFGPATTGKTN 119
Query: 443 LLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRK 502
+ I + + N + F + + + E +
Sbjct: 120 IAEAIAHTVPFYGCVNWTNENFPFNDCVDKMVIWWEEGKMTAKVV----------ESAKA 169
Query: 503 IIGRYGLTGRQ 513
I+G + Q
Sbjct: 170 ILGGSKVRVDQ 180
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 33.1 bits (74), Expect = 0.059
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVGMVRKNSHLRFARYHQHLHEL 476
+ + GP +GK++LL L + P+V S + L +
Sbjct: 5 SIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDF 53
Score = 26.9 bits (58), Expect = 6.0
Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 13/116 (11%)
Query: 118 LLGLNGSGKSTLLAVLGNREVP----------VPDHIDIFHLTREMPASDKSALTCVMEV 167
+ G SGK++LL +L V D+ + P K +
Sbjct: 8 IAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLRYKLSDYL 67
Query: 168 DEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTK 223
++ L + + D + + L DI + T + I + K
Sbjct: 68 KTRAKFVKGLIFMVDSTVDPKKLT---TTAEFLVDILSITESSCENGIDILIACNK 120
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 32.3 bits (72), Expect = 0.074
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
RL ++G + AGK+T+L G+ ++ + L+
Sbjct: 4 RLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLN 49
Score = 26.2 bits (56), Expect = 8.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 118 LLGLNGSGKSTLLAVLGNREVP 139
+LGL+ +GK+T+L +V
Sbjct: 7 MLGLDNAGKTTILKKFNGEDVD 28
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 33.4 bits (75), Expect = 0.074
Identities = 30/177 (16%), Positives = 50/177 (28%), Gaps = 20/177 (11%)
Query: 410 SDDGPWIYRNLEFGIDLDTR-LALVGPNGAGKSTLLN-LIYGDLTPSVGMV---RKNSHL 464
+ D + R L + G G GKS LL L Y L MV L
Sbjct: 32 EKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDML 91
Query: 465 -RFARYHQHLHELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSD 523
+F R + D + F E+++ + ++ G+
Sbjct: 92 SKFGRDKDIILNPYDQRTKGWSF----FNEIRNDYDWQRYALSVVPRGKTDEAEEWASYG 147
Query: 524 GQKCRVVFAYLA----------WQAPHLLLLDEPTNHLDMETIDALADAINDFEGGL 570
R LA + + D+ L+ ++L N+ L
Sbjct: 148 RLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKAL 204
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 32.3 bits (72), Expect = 0.095
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 429 RLALVGPNGAGKSTLLNLIYG 449
R+ +VG GKSTLLN +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLN 22
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 32.9 bits (74), Expect = 0.10
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 429 RLALVGPNGAGKSTLLNLIYGD 450
+ ++G G GKS+ +N I G+
Sbjct: 34 TILVMGKGGVGKSSTVNSIIGE 55
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 32.0 bits (71), Expect = 0.11
Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 3/132 (2%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVG--MVRKNSHLRFARYHQHLHELLDLDISPLD 485
L LVG +GK+T +N + G + + + L ++
Sbjct: 4 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSM 63
Query: 486 YMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLD 545
+ + + ++ + Q V+ P L
Sbjct: 64 WERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEK 123
Query: 546 EPTNHLDMETID 557
E +++ I
Sbjct: 124 ELIEKMNLSAIQ 135
Score = 26.6 bits (57), Expect = 7.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 118 LLGLNGSGKSTLLAVLGNREVP 139
L+GL SGK+T + V+ + +
Sbjct: 7 LVGLQYSGKTTFVNVIASGQFN 28
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 31.6 bits (70), Expect = 0.14
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 429 RLALVGPNGAGKSTLLNLIYG 449
++ + G AGKS+LLN + G
Sbjct: 3 KVVIAGRPNAGKSSLLNALAG 23
Score = 28.2 bits (61), Expect = 2.0
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 113 GRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTR 151
G + + G +GKS+LL L RE + I
Sbjct: 1 GMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDV 39
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 31.8 bits (71), Expect = 0.14
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHL-RFARYHQHLHELLDLDISPLDYML 488
+ L GP+GAGKSTLL ++ + + G SH R R + + +
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSV--SHTTRNPRPGEEDGKDYYFVTREMMQRD 60
Query: 489 QSFPEVKDREEMRKIIGRY 507
+ + + E +
Sbjct: 61 IAAGDFIEHAEFSGNLYGT 79
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 31.6 bits (70), Expect = 0.16
Identities = 8/46 (17%), Positives = 18/46 (39%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
R+ ++G +GAGK+T+L + + + +
Sbjct: 7 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQ 52
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 32.0 bits (71), Expect = 0.16
Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 13/119 (10%)
Query: 99 GCELLQDTMLE--LNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPAS 156
G + L D +L + + G GSGK+ L + L E
Sbjct: 21 GSKSL-DKLLGGGIETQAITEVFGEFGSGKTQLAH----------TLAVMVQLPPEEGGL 69
Query: 157 DKSALTCVMEVDEERVRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANI 215
+ S + E R+ ++A+ D+ + + + +A
Sbjct: 70 NGSVIWIDTENTFRPERIREIAQNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIK 128
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 31.5 bits (70), Expect = 0.18
Identities = 26/171 (15%), Positives = 50/171 (29%), Gaps = 6/171 (3%)
Query: 114 RRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVR 173
R L G G GK+TL+ +D F+ + V
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 174 LEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDF 233
E + + ++D+ + ++ + G + K + F
Sbjct: 62 SRVGLEPPPGKRECRVGQYVVDL-TSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELF 120
Query: 234 SGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVI 284
S + R P ++L T + + L EE++ K + V
Sbjct: 121 SQLFIQ---AVRQTLSTPGTIILG--TIPVPKGKPLALVEEIRNRKDVKVF 166
Score = 31.1 bits (69), Expect = 0.27
Identities = 11/46 (23%), Positives = 18/46 (39%)
Query: 432 LVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELL 477
L GP G GK+TL++ L S V + + + +
Sbjct: 6 LTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDV 51
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 31.7 bits (70), Expect = 0.19
Identities = 15/138 (10%), Positives = 40/138 (28%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYML 488
+A G + AGKS+ LN + + + + + L +
Sbjct: 18 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEV 77
Query: 489 QSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPT 548
+ K + + + + + V + + + + +L+L
Sbjct: 78 PEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKA 137
Query: 549 NHLDMETIDALADAINDF 566
+ L A + + +
Sbjct: 138 DKLASGARKAQLNMVREA 155
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 31.5 bits (70), Expect = 0.20
Identities = 17/189 (8%), Positives = 49/189 (25%), Gaps = 8/189 (4%)
Query: 432 LVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYML 488
+ G G GKST+L + + + ++ + + D ++ L
Sbjct: 6 VTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRD-EMRKLSVEK 64
Query: 489 QSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVV--FAYLAWQAPHLLLLDE 546
Q ++ + + + G + + + + LL+
Sbjct: 65 QKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEA 124
Query: 547 PTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYK 606
+ + + ++ A + G K N+
Sbjct: 125 DPKII-LSRQKRDTTRNRNDYSDESVILETINFARYAATASAV-LAGSTVKVIVNVEGDP 182
Query: 607 ETLRAKVLK 615
++++
Sbjct: 183 SIAANEIIR 191
Score = 30.4 bits (67), Expect = 0.42
Identities = 17/178 (9%), Positives = 39/178 (21%), Gaps = 7/178 (3%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHL-----TREMPASDKSALTCVMEVDEERV 172
+ G+ G GKST+LA + I+ + A
Sbjct: 6 VTGIPGVGKSTVLAKVKEI--LDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVE 63
Query: 173 RLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKD 232
+ +KL +E++ T + + +
Sbjct: 64 KQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLE 123
Query: 233 FSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDACVWLEEELKTYKRILVIISHSQD 290
+ + ++ + + VI++ D
Sbjct: 124 ADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGD 181
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 31.6 bits (70), Expect = 0.22
Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 7/185 (3%)
Query: 431 ALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQS 490
A+ G +GAGK TL+ + G R + L F RY Q + + + ++
Sbjct: 4 AIEGVDGAGKRTLVEKLSGAFR---AAGRSVATLAFPRYGQSVAADIAAEALHGEHG--- 57
Query: 491 FPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNH 550
R R V + A+ A L
Sbjct: 58 DLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAA 117
Query: 551 LDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEIWICENGKVTKWEGNILDYKETLR 610
++ I+ + + ++L + +E + + ++
Sbjct: 118 AWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERD-AELQQRTG 176
Query: 611 AKVLK 615
A +
Sbjct: 177 AVYAE 181
Score = 26.6 bits (57), Expect = 7.9
Identities = 24/172 (13%), Positives = 41/172 (23%), Gaps = 13/172 (7%)
Query: 120 GLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCV--------MEVDEER 171
G++G+GK TL+ L A ++
Sbjct: 7 GVDGAGKRTLVEKLSGA---FRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSV 63
Query: 172 VRLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTK 231
+ L A Q + D + A +A LH K +
Sbjct: 64 YAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRI 123
Query: 232 DFSGGWRMRIALARALYVKPHLLL--LDEPTNHLDLDACVWLEEELKTYKRI 281
+F+ + L V L A E + + +R
Sbjct: 124 EFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRT 175
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 31.3 bits (70), Expect = 0.26
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVG 456
RL L+G +GKST++ + + + G
Sbjct: 8 RLLLLGAGESGKSTIVKQMRILHVVLTSG 36
Score = 26.6 bits (58), Expect = 7.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 118 LLGLNGSGKSTLL 130
LLG SGKST++
Sbjct: 11 LLGAGESGKSTIV 23
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 30.7 bits (68), Expect = 0.27
Identities = 19/159 (11%), Positives = 49/159 (30%), Gaps = 6/159 (3%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLT-PSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYML 488
+ +G G+GKSTL + DL + + + + + + +
Sbjct: 3 IVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQKM 62
Query: 489 QSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPT 548
F ++ + G ++ ++ L + + L DE
Sbjct: 63 ADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKRPLFYDEIK 122
Query: 549 NHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEI 587
+ + +F ++ + + I+++ EI
Sbjct: 123 AKKLYNERLSKYEQKANFI-----LNIENKNIDELLSEI 156
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 30.8 bits (68), Expect = 0.33
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 429 RLALVGPNGAGKSTLLNLIYGD 450
++A+VG GKSTL N I
Sbjct: 10 KVAIVGRPNVGKSTLFNAILNK 31
Score = 28.1 bits (61), Expect = 2.3
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 109 ELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH 148
E+ + ++G GKSTL + N+E + I
Sbjct: 4 EITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTT 43
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 30.7 bits (68), Expect = 0.33
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
LVG GKSTLL+++
Sbjct: 5 GLVGFPSVGKSTLLSVVSS 23
Score = 28.7 bits (63), Expect = 1.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPDH 143
GL+G GKSTLL+V+ + + + D+
Sbjct: 5 GLVGFPSVGKSTLLSVVSSAKPKIADY 31
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.5 bits (67), Expect = 0.36
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
A+VG GKSTLLN + G
Sbjct: 9 AIVGRPNVGKSTLLNKLLG 27
Score = 28.1 bits (61), Expect = 2.3
Identities = 17/123 (13%), Positives = 36/123 (29%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEK 176
++G GKSTLL L +++ + R + + A + EK
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEK 68
Query: 177 LAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGG 236
A + + S +++ + + + T + G + D
Sbjct: 69 RAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQE 128
Query: 237 WRM 239
Sbjct: 129 KAD 131
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 30.3 bits (67), Expect = 0.38
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
+ L GP+ GKST++ + + V S A +
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSV---SATTRAPRPGEVD 46
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 30.4 bits (67), Expect = 0.39
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
LVG AGKS+LL +
Sbjct: 5 GLVGYPNAGKSSLLAAMTR 23
Score = 28.1 bits (61), Expect = 2.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPDH 143
GL+G +GKS+LLA + + +
Sbjct: 5 GLVGYPNAGKSSLLAAMTRAHPKIAPY 31
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 30.7 bits (68), Expect = 0.40
Identities = 19/145 (13%), Positives = 42/145 (28%), Gaps = 17/145 (11%)
Query: 432 LVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQSF 491
VG G+GK+TL + ++LD + +
Sbjct: 5 FVGTAGSGKTTLTG-----------------EFGRYLEDNYKVAYVNLDTGVKELPYEPS 47
Query: 492 PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHL 551
+V++ + +I+ V +L + + + +L+D P
Sbjct: 48 IDVREFVTVEEIMREGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQME 107
Query: 552 DMETIDALADAINDFEGGLVLVSHD 576
+ + + LV+ D
Sbjct: 108 TFLFHEFGVRLMENLPYPLVVYISD 132
Score = 28.0 bits (61), Expect = 3.0
Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 16/121 (13%)
Query: 117 GLLGLNGSGKSTLLAVL-----GNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEER 171
+G GSGK+TL N +V + P+ D V E+ E
Sbjct: 4 VFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMREG 63
Query: 172 VR--------LEKLAEQLVACEDDESQEQLMDIYDRLD---DISADTAEARAANILHGLG 220
++L E+ + + + + Y +D + ++ L
Sbjct: 64 YGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENLP 123
Query: 221 F 221
+
Sbjct: 124 Y 124
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 30.3 bits (67), Expect = 0.43
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
+L L+G +GKST++ + G+V + + +
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDV 49
Score = 26.8 bits (58), Expect = 6.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 118 LLGLNGSGKSTLLAVLGNREVP 139
LLG SGKST++ +
Sbjct: 7 LLGAGESGKSTIVKQMKIIHEA 28
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 30.1 bits (66), Expect = 0.49
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
G + GKSTL+ + G
Sbjct: 4 IFAGRSNVGKSTLIYRLTG 22
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 30.1 bits (66), Expect = 0.49
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
A+VG GKSTLLN + G
Sbjct: 9 AIVGKPNVGKSTLLNNLLG 27
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 30.3 bits (67), Expect = 0.50
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 428 TRL-ALVGPNGAGKSTLLNLIYGDLTPSVGMVR 459
+R + GP+G GKSTLL ++ + S G
Sbjct: 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSV 33
>d1ifra_ b.1.16.1 (A:) Lamin A/C globular tail domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 113
Score = 29.1 bits (65), Expect = 0.54
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 375 LTDKVTTDKTVTFTFPSCGKIPPP---VIMVQNVSFRYSDDGPWIYRNLE-FGIDLDTRL 430
+ + D +T+ FP + I +S +++ +G R
Sbjct: 38 IKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSPPTDLVWKAQNTWGCGNSLRT 97
Query: 431 ALVGPNGAGKST 442
AL+ G +
Sbjct: 98 ALINSTGEEVAM 109
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 30.1 bits (66), Expect = 0.60
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
AL G + GKS+ +N +
Sbjct: 27 ALAGRSNVGKSSFINSLIN 45
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 29.9 bits (66), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 416 IYRNLEFGIDLDTRLALVGPNGAGKSTLLNLIYGD 450
I R L+ D + R+ L+G + AGK+TLL + +
Sbjct: 5 ILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASE 39
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 29.8 bits (66), Expect = 0.61
Identities = 16/76 (21%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 432 LVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQSF 491
VG GAGKST + S G V N + L + +
Sbjct: 19 AVGFPGAGKSTF----IQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTN 74
Query: 492 PEVKDREEMRKIIGRY 507
P+V R +
Sbjct: 75 PDVPSRARYIQCAKDA 90
Score = 26.0 bits (56), Expect = 9.9
Identities = 14/117 (11%), Positives = 31/117 (26%), Gaps = 1/117 (0%)
Query: 118 LLGLNGSGKSTLLA-VLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEK 176
+G G+GKST + L + + + R + + + V +
Sbjct: 19 AVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTNPDVP 78
Query: 177 LAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDF 233
+ + C D + + + R + + K F
Sbjct: 79 SRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMVMFSYRKQF 135
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 30.0 bits (66), Expect = 0.64
Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 5/154 (3%)
Query: 120 GLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKLAE 179
G +GKST + +L D + + ++ L
Sbjct: 9 GNIAAGKSTFVNILKQL---CEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQM 65
Query: 180 QLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGGWRM 239
E Q R+ A L F + + + S +
Sbjct: 66 MYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYES 125
Query: 240 --RIALARALYVKPHLLLLDEPTNHLDLDACVWL 271
+Y H + ++ L+LD ++L
Sbjct: 126 ECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYL 159
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 29.7 bits (65), Expect = 0.65
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 431 ALVGPNGAGKSTLLNLIYG 449
+VG GKSTL N +
Sbjct: 4 LIVGRPNVGKSTLFNKLVK 22
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 29.6 bits (65), Expect = 0.66
Identities = 12/69 (17%), Positives = 23/69 (33%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKL 177
L+G++GSGKS + + + ++ D H R + + L
Sbjct: 11 LMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDA 70
Query: 178 AEQLVACED 186
A +
Sbjct: 71 AFAMQRTNK 79
Score = 26.5 bits (57), Expect = 7.9
Identities = 21/156 (13%), Positives = 41/156 (26%), Gaps = 1/156 (0%)
Query: 432 LVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQSF 491
L+G +G+GKS + + + L + R L D D P L
Sbjct: 11 LMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDA 70
Query: 492 PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTNHL 551
R +I L + + + + ++
Sbjct: 71 AFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQ 130
Query: 552 DMETIDALADAINDFEGGLVLVSHDFRLINQVAEEI 587
+ T E +++V D + + V
Sbjct: 131 MLVTQFETLQEPGADETDVLVVDID-QPLEGVVAST 165
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 30.0 bits (67), Expect = 0.68
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Query: 396 PPPVIMVQNVSFRYSDDGPWIYRNLEFGIDLDTRLALV---GPNGAGKSTLLNLIYG 449
P+ +++N + R L+ + + +V G GKS L+N + G
Sbjct: 2 TGPMCLIENTNGRLM----ANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 54
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 29.6 bits (65), Expect = 0.71
Identities = 7/46 (15%), Positives = 17/46 (36%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
++ +VG + AGK+T+L + ++ +
Sbjct: 17 KVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFL 62
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 29.7 bits (66), Expect = 0.72
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 118 LLGLNGSGKSTLLAVLG------NREVPVPDHIDIFHLTREMP 154
L+GL GSGK+T A L R + RE
Sbjct: 15 LVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQL 57
Score = 28.1 bits (62), Expect = 2.5
Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 9/141 (6%)
Query: 430 LALVGPNGAGKSTL---LNLIYGDLTPSVGMVRKNSHLRFA-RYHQHLHELLDLDISPLD 485
LVG G+GK+T L L Y +V ++ A + L E + + + +
Sbjct: 13 WFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVM 72
Query: 486 YMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH--LLL 543
R + + R D + P LL+
Sbjct: 73 DG---ESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLV 129
Query: 544 LDEPTNHLDMETIDALADAIN 564
LD T + A + +
Sbjct: 130 LDAMTGQEALSVARAFDEKVG 150
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 29.6 bits (65), Expect = 0.87
Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 4/97 (4%)
Query: 429 RLALVGPNGAGKSTLLNLI---YGDLTPSVG-MVRKNSHLRFARYHQHLHELLDLDISPL 484
+ ++G GAGK T I YG S G ++R ++Y + + + +
Sbjct: 3 VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVP 62
Query: 485 DYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQL 521
+ S + + + M + L
Sbjct: 63 VEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNL 99
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.6 bits (65), Expect = 0.87
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 431 ALVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYM 487
+ G G G +T L + MV S + ++L D + +D
Sbjct: 5 VVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRD-QMRKMDPE 63
Query: 488 LQSFPEVKDREEMRKIIG 505
Q + ++ ++
Sbjct: 64 TQKRIQKMAGRKIAEMAK 81
Score = 26.9 bits (58), Expect = 5.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 118 LLGLNGSGKSTLLAVLGNR 136
+ G+ G G +T + +
Sbjct: 6 VTGVPGVGSTTSSQLAMDN 24
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 29.7 bits (66), Expect = 1.00
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 429 RLALVGPNGAGKSTLLNLIYG 449
+A+ G G+GKS+ +N + G
Sbjct: 58 NVAVTGETGSGKSSFINTLRG 78
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 29.1 bits (64), Expect = 1.0
Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 8/167 (4%)
Query: 429 RLALVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLD 485
++ + G +GK T LI Y S G + + + + E ++ D
Sbjct: 5 KVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPD 64
Query: 486 YMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHL---- 541
++ + + + R+ + G + L + F L L
Sbjct: 65 EIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERV 124
Query: 542 -LLLDEPTNHLDMETIDALADAINDFEGGLVLVSHDFRLINQVAEEI 587
E L +ET +++ +++ ++ V +I
Sbjct: 125 VFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKI 171
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 28.9 bits (63), Expect = 1.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 429 RLALVGPNGAGKSTLLNLIYGD 450
R+ +VG + AGK+T+L +
Sbjct: 2 RILMVGLDAAGKTTILYKLKLG 23
Score = 26.2 bits (56), Expect = 9.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 118 LLGLNGSGKSTLLAVLGNREVP 139
++GL+ +GK+T+L L E+
Sbjct: 5 MVGLDAAGKTTILYKLKLGEIV 26
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 29.4 bits (65), Expect = 1.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 429 RLALVGPNGAGKSTLLNLIYG 449
++ +VG +GKS++L I G
Sbjct: 26 QIVVVGSQSSGKSSVLENIVG 46
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 29.1 bits (64), Expect = 1.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 430 LALVGPNGAGKSTLLNLI 447
L L+G +G G+ + N +
Sbjct: 6 LVLLGAHGVGRRHIKNTL 23
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 29.1 bits (64), Expect = 1.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 434 GPNGAGKSTLLNLIYGDLTPSVGMVR 459
G + GK+T N++Y L P+ +++
Sbjct: 10 GLDRTGKTTQCNILYKKLQPNCKLLK 35
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 29.1 bits (64), Expect = 1.2
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 4/109 (3%)
Query: 429 RLALVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLD 485
R+ L+G AGK T I YG S G + + + + + +++D D
Sbjct: 2 RIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTD 61
Query: 486 YMLQSFP-EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAY 533
++ + E +E+ R G + + V+
Sbjct: 62 ELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFD 110
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 29.1 bits (64), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH 148
G+ G GSGKST+ A+L + PV D +
Sbjct: 7 GITGNIGSGKSTVAALLRSWGYPVLDLDALAA 38
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 29.4 bits (65), Expect = 1.3
Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 10/46 (21%)
Query: 117 GLLGLNGSGKSTLLAVL---------GNREVPVPDHIDIFHLTREM 153
G GSGKS + G + + D F+LT E
Sbjct: 31 FFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDD-FYLTHED 75
Score = 27.5 bits (60), Expect = 5.8
Identities = 21/117 (17%), Positives = 35/117 (29%), Gaps = 6/117 (5%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKN---SHLRFARYHQHLHELLDLDISPLDY 486
+ GP G+GKS IY L G + S F H+ +L + +
Sbjct: 30 IFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLL 89
Query: 487 MLQSFP---EVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540
+ P ++K +E+ I Q + + Q Q
Sbjct: 90 QGRGLPGTHDMKLLQEVLNTIFNNNEHPDQDTVVLPKYDKSQFKGEGDRCPTGQKIK 146
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 29.2 bits (65), Expect = 1.4
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
R+ L G G GK+T
Sbjct: 7 RIYLDGAYGIGKTTAAEEF 25
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 28.7 bits (63), Expect = 1.6
Identities = 19/102 (18%), Positives = 30/102 (29%), Gaps = 5/102 (4%)
Query: 429 RLALVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLD 485
R+ L+GP GAGK T + G S G + + + + LD
Sbjct: 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPS 61
Query: 486 YMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKC 527
+ V DR + L G + +
Sbjct: 62 DLTNEL--VDDRLNNPDAANGFILDGYPRSVEQAKALHEMLE 101
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 28.4 bits (62), Expect = 1.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDL 451
+ LVG G+GKST+ + L
Sbjct: 3 KAVLVGLPGSGKSTIGRRLAKAL 25
Score = 26.5 bits (57), Expect = 8.2
Identities = 27/159 (16%), Positives = 45/159 (28%), Gaps = 13/159 (8%)
Query: 118 LLGLNGSGKSTLLAVLGNR-EVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEK 176
L+GL GSGKST+ L V +D E A + ++E R+E+
Sbjct: 6 LVGLPGSGKSTIGRRLAKALGVG---LLDTDV-AIEQRTGRSIADIFATDGEQEFRRIEE 61
Query: 177 LAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDFSGG 236
+ + D +A + + + G
Sbjct: 62 DVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAG 121
Query: 237 WRMRIALA------RALYVKPHLLLLDEPTNHLDLDACV 269
LY + + +D TN + A V
Sbjct: 122 PDRAEKYRALMAKRAPLYRRVATMRVD--TNRRNPGAVV 158
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 28.6 bits (63), Expect = 1.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 430 LALVGPNGAGKSTLLNLI 447
+ P+GAGKS+L+ +
Sbjct: 5 YIVSAPSGAGKSSLIQAL 22
Score = 27.5 bits (60), Expect = 4.1
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 113 GRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEE 170
G Y + +G+GKS+L+ L + + + H TR+ + +E
Sbjct: 2 GTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDE 59
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.5 bits (62), Expect = 1.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 429 RLALVGPNGAGKSTLLNLIYGD 450
+L +G + AGK+TLL+++ D
Sbjct: 15 KLVFLGLDNAGKTTLLHMLKDD 36
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 28.5 bits (63), Expect = 1.8
Identities = 9/69 (13%), Positives = 18/69 (26%), Gaps = 6/69 (8%)
Query: 118 LLGLNGSGKSTLLAVLGNR------EVPVPDHIDIFHLTREMPASDKSALTCVMEVDEER 171
++G+NG GK+T + L + V + E +
Sbjct: 14 MVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTG 73
Query: 172 VRLEKLAEQ 180
+
Sbjct: 74 ADSASVIFD 82
Score = 26.6 bits (58), Expect = 7.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 428 TRLALVGPNGAGKSTLL 444
+ +VG NG GK+T +
Sbjct: 10 FVILMVGVNGVGKTTTI 26
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 28.4 bits (63), Expect = 2.0
Identities = 11/86 (12%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 424 IDLDTR-LALVGPNGAGKSTL-LNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLD 478
+++ + L G +G GKS L+LI + + + + + F R + + ++
Sbjct: 11 LEVFGVGVLLTGRSGIGKSECALDLINKNHLFVGDDAIEIYRLGNRLFGRAQEVAKKFME 70
Query: 479 LDISPLDYMLQSFPEVKDREEMRKII 504
+ + + + + ++ +
Sbjct: 71 IRGLGIINVERFYGLQITKQRTEIQL 96
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 28.7 bits (63), Expect = 2.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 429 RLALVGPNGAGKSTLLNLIYG 449
++A+VG AGKS++L G
Sbjct: 28 QIAVVGGQSAGKSSVLENFVG 48
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 28.3 bits (62), Expect = 2.1
Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVG-MVRKNSHLRFARYHQHLHELLDLDIS 482
++ ++G +G GKS+LL P + + + ++ + +L D +
Sbjct: 9 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 28.4 bits (62), Expect = 2.1
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 429 RLALVGPNGAGKSTLLN---LIYGDLTPSVGMVRKNSHLRFARYHQH 472
+L L+G +GKST + +I+G P+ G++ L+ +
Sbjct: 4 KLLLLGTGESGKSTFIKQMRIIHGSGVPTTGIIEYPFDLQSVIFRMV 50
Score = 26.4 bits (57), Expect = 9.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 118 LLGLNGSGKSTLL 130
LLG SGKST +
Sbjct: 7 LLGTGESGKSTFI 19
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 28.0 bits (61), Expect = 2.2
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 422 FGIDLDTRLALVGPNGAGKSTLLNLIYGD 450
+G + + R+ ++G +GAGK+T+L +
Sbjct: 12 WGSNKELRILILGLDGAGKTTILYRLQIG 40
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 28.2 bits (62), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 118 LLGLNGSGKSTLLAVLGNR 136
++G+NG GK+T +A LG
Sbjct: 11 VVGVNGVGKTTTIAKLGRY 29
Score = 27.4 bits (60), Expect = 4.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 430 LALVGPNGAGKSTLL 444
+ +VG NG GK+T +
Sbjct: 9 VLVVGVNGVGKTTTI 23
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 28.8 bits (64), Expect = 2.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
R+ + GP+G GK+T L+
Sbjct: 6 RVYIDGPHGMGKTTTTQLL 24
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 28.8 bits (64), Expect = 2.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
R+ L G G GKST ++
Sbjct: 8 RIYLDGVYGIGKSTTGRVM 26
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 28.1 bits (61), Expect = 2.4
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKL 177
+ G G GKST L + + +I+ + + + + + L
Sbjct: 7 ITGPAGVGKSTTCKRLAAQ-LDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDL 65
Query: 178 AEQLVACEDD 187
+ ++D
Sbjct: 66 TVNFLLAQND 75
Score = 26.5 bits (57), Expect = 8.2
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 430 LALVGPNGAGKSTLLNLI 447
+ GP G GKST +
Sbjct: 5 YIITGPAGVGKSTTCKRL 22
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 28.7 bits (63), Expect = 2.5
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 429 RLALVGPNGAGKSTLLN-----LIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479
RL + G GAGKST L LI L +V V +S + + DL
Sbjct: 56 RLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDL 111
Score = 28.3 bits (62), Expect = 3.0
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 101 ELLQDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHI 144
+LL M R G+ G G+GKST L G + +
Sbjct: 42 QLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKV 85
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.7 bits (60), Expect = 2.5
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ +VG GKS+++
Sbjct: 4 KMVVVGNGAVGKSSMIQ 20
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 28.2 bits (62), Expect = 2.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 118 LLGLNGSGKSTLLAVLGNR 136
++G+NG+GK+T L
Sbjct: 16 VVGVNGTGKTTSCGKLAKM 34
>d1tueb_ b.91.1.1 (B:) E2 regulatory, transactivation domain {Human
papillomavirus type 18 [TaxId: 333761]}
Length = 194
Score = 28.1 bits (63), Expect = 2.6
Identities = 8/29 (27%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
Query: 171 RVRLEKLAEQLVACEDDESQEQLMDIYDR 199
+ E L+E+L A Q++++D Y+
Sbjct: 3 QTPKETLSERLSAL-----QDKIIDHYEN 26
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 28.3 bits (62), Expect = 2.6
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVP 141
G++G+ GKST + + P
Sbjct: 14 GIVGMPNVGKSTFFRAITKSVLGNP 38
Score = 27.5 bits (60), Expect = 4.7
Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 14/44 (31%)
Query: 429 RLALVG-PNGAGKSTLLNLI------------YGDLTPSVGMVR 459
+ +VG PN GKST I Y + P V
Sbjct: 12 KTGIVGMPN-VGKSTFFRAITKSVLGNPANYPYATIDPEEAKVA 54
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 2.7
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 429 RLALVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLD 485
R+ L+GP GAGK T + + + G + ++ + + +++D D
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSD 63
Query: 486 YM 487
+
Sbjct: 64 DI 65
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.7 bits (60), Expect = 2.8
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ ++G +G GK++L+N
Sbjct: 4 KVIILGDSGVGKTSLMN 20
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 27.9 bits (61), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPD 142
GL G GSGK+T+ + + VP+ D
Sbjct: 6 GLTGGIGSGKTTIANLFTDLGVPLVD 31
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 28.1 bits (61), Expect = 2.8
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
+A++G +GKS L+N +
Sbjct: 9 TVAILGGESSGKSVLVNKL 27
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 27.7 bits (60), Expect = 2.9
Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
Query: 113 GRRYGLLGLNGSGKSTLLAVLGNR--EVPVPDHIDIFHLTREMPASDKSALTCVMEVDEE 170
G + G G+GK+++ ++ + + D T ++E +E
Sbjct: 5 GINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDE 64
Query: 171 RVRLEKLAEQLVACEDDESQEQLMDIYDR 199
L+ + +V+ + +++
Sbjct: 65 DRLLDFMEPIMVSRGNHVVDYHSSELFPE 93
Score = 26.9 bits (58), Expect = 6.2
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
+ + G G GK+++ +I
Sbjct: 7 NILITGTPGTGKTSMAEMI 25
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT
{Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Length = 361
Score = 28.5 bits (62), Expect = 2.9
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 549 NHLDMETIDALADAINDFE 567
N + E+ +AL + F+
Sbjct: 339 NAVPYESCEALVQFMEHFK 357
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.7 bits (60), Expect = 3.1
Identities = 5/17 (29%), Positives = 14/17 (82%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ ++G +G GK++L++
Sbjct: 4 KVIILGDSGVGKTSLMH 20
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 28.0 bits (61), Expect = 3.2
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 13/53 (24%)
Query: 429 RLALVG-PNGAGKSTLLNLI-----------YGDLTPSVGMVRKNSHLRFARY 469
+ +VG PN GKST + + + +VG+ +
Sbjct: 2 EIGVVGKPN-VGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKEL 53
Score = 27.2 bits (59), Expect = 5.9
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPDH 143
G++G GKST + +V + ++
Sbjct: 4 GVVGKPNVGKSTFFSAATLVDVEIANY 30
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 27.6 bits (60), Expect = 3.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 429 RLALVGPNGAGKSTLLN 445
R+ ++G + AGK+T+L
Sbjct: 14 RILMLGLDAAGKTTILY 30
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 27.4 bits (59), Expect = 3.3
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVR 173
+G GSGKST + +I+ + + A ++ + E V
Sbjct: 7 TIGCPGSGKSTWAREFIAKNPGFY-NINRDDYRQSIMAHEERDEYKYTKKKEGIVT 61
Score = 26.2 bits (56), Expect = 7.7
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 432 LVGPNGAGKSTL 443
+G G+GKST
Sbjct: 7 TIGCPGSGKSTW 18
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.5 bits (60), Expect = 3.4
Identities = 4/17 (23%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ ++G + GK++ L
Sbjct: 7 KILIIGNSSVGKTSFLF 23
>d2nnua1 b.91.1.1 (A:1-200) E2 regulatory, transactivation domain
{Human papillomavirus type 16 [TaxId: 333760]}
Length = 200
Score = 27.7 bits (62), Expect = 3.4
Identities = 6/26 (23%), Positives = 14/26 (53%), Gaps = 5/26 (19%)
Query: 174 LEKLAEQLVACEDDESQEQLMDIYDR 199
+E L ++L C Q++++ Y+
Sbjct: 1 METLCQRLNVC-----QDKILTHYEN 21
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 27.5 bits (60), Expect = 3.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
R A++G G+GK T+ + I
Sbjct: 8 RAAIMGAPGSGKGTVSSRI 26
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 27.6 bits (60), Expect = 3.5
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 430 LALVGPNGAGKSTLLNLIYGDL 451
L L G G+GKST+ +
Sbjct: 7 LLLSGHPGSGKSTIAEALANLP 28
Score = 27.6 bits (60), Expect = 3.7
Identities = 29/162 (17%), Positives = 50/162 (30%), Gaps = 9/162 (5%)
Query: 113 GRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERV 172
G L G GSGKST+ L N H L + + + ++
Sbjct: 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL-WGYIKHGRIDPW-LPQSHQQNR 61
Query: 173 RLEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKE----MQQK 228
+ ++A + E ++D R D + A TA AR + + E +
Sbjct: 62 MIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCLDR 121
Query: 229 KTKDFSGGWRM-RIALARALYVKPHLLLLDEPTNHLDLDACV 269
S + + A +L + D D +
Sbjct: 122 GGDSLSDPLVVADLHSQFADLGAFEHHVLP--VSGKDTDQAL 161
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 27.4 bits (59), Expect = 3.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 429 RLALVGPNGAGKSTLLNLIYGD 450
++ L+G G GKS L + G
Sbjct: 3 KVLLLGAPGVGKSALARIFGGV 24
>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
{Escherichia coli [TaxId: 562]}
Length = 360
Score = 28.2 bits (61), Expect = 3.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 549 NHLDMETIDALADAINDFE 567
N + +E + AL D + +FE
Sbjct: 338 NAMPLEGVKALTDFMVEFE 356
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.6 bits (60), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
R L+GP GAGK T +
Sbjct: 5 RAVLLGPPGAGKGTQAPKL 23
>d1r6na_ b.91.1.1 (A:) E2 regulatory, transactivation domain {Human
papillomavirus type 11 [TaxId: 10580]}
Length = 196
Score = 27.7 bits (62), Expect = 3.7
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 5/25 (20%)
Query: 175 EKLAEQLVACEDDESQEQLMDIYDR 199
E +A++L AC Q+QL+++Y+
Sbjct: 2 EAIAKRLDAC-----QDQLLELYEE 21
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 27.4 bits (60), Expect = 3.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ L+G +G GKS LL
Sbjct: 4 KILLIGDSGVGKSCLLV 20
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.2 bits (59), Expect = 3.9
Identities = 9/52 (17%), Positives = 15/52 (28%), Gaps = 1/52 (1%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479
+ ++G G GKS LL+ I + L +
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI 58
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 27.5 bits (60), Expect = 3.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPVPDHIDIFH 148
L G GSGKST+ + + V D I
Sbjct: 7 ALTGGIGSGKSTVANAFADLGINVIDADIIAR 38
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.1 bits (59), Expect = 4.2
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ L+G G GK+ L+
Sbjct: 7 KIVLIGNAGVGKTCLVR 23
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 27.6 bits (60), Expect = 4.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 432 LVGPNGAGKSTLLNLIYGDL 451
L G G+GK++L + I+ +
Sbjct: 37 LGGQPGSGKTSLRSAIFEET 56
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 27.4 bits (60), Expect = 4.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 118 LLGLNGSGKSTLLAVLGNR 136
L+G+ G+GK+T L
Sbjct: 17 LVGVQGTGKATTAGKLAYF 35
Score = 26.3 bits (57), Expect = 9.3
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 428 TRLALVGPNGAGKST 442
+ LVG G GK+T
Sbjct: 13 YVIMLVGVQGTGKAT 27
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 27.3 bits (59), Expect = 4.3
Identities = 5/15 (33%), Positives = 7/15 (46%)
Query: 431 ALVGPNGAGKSTLLN 445
VG +GK+ L
Sbjct: 4 LFVGLCDSGKTLLFV 18
Score = 26.5 bits (57), Expect = 9.6
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 114 RRYGLLGLNGSGKSTLLAVLGNREVP 139
R +GL SGK+ L L +
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLTGQYR 26
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 27.6 bits (60), Expect = 4.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ L+G +GKST L
Sbjct: 4 KILLLGAGESGKSTFLK 20
Score = 26.4 bits (57), Expect = 8.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVP 141
LLG SGKST L + P
Sbjct: 7 LLGAGESGKSTFLKQMRIIHGQDP 30
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.4 bits (59), Expect = 4.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 429 RLALVGPNGAGKSTLLNLIYGDL 451
+ LVGP GAGKST+ + L
Sbjct: 4 NIFLVGPMGAGKSTIGRQLAQQL 26
Score = 26.6 bits (57), Expect = 6.5
Identities = 21/157 (13%), Positives = 38/157 (24%), Gaps = 7/157 (4%)
Query: 118 LLGLNGSGKSTL---LA-VLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVR 173
L+G G+GKST+ LA L I+ D + +E+ +
Sbjct: 7 LVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVIN 66
Query: 174 LEKLAEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQKKTKDF 233
+ +V S + E L K+ +
Sbjct: 67 ELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETP 126
Query: 234 SG-GWRMRIALARALYVKPHLLLLDEPTNHLDLDACV 269
LY + + + T+
Sbjct: 127 PREVLEALANERNPLYEEIADVTIR--TDDQSAKVVA 161
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 27.3 bits (59), Expect = 4.5
Identities = 7/52 (13%), Positives = 14/52 (26%), Gaps = 1/52 (1%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479
++ ++G + GK+ L G A + L
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 55
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 27.2 bits (59), Expect = 4.5
Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 7/60 (11%)
Query: 429 RLALVGPNGAGKSTL-------LNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDI 481
+ L G G GK+TL L Y ++ + L E +D
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDE 65
Score = 26.8 bits (58), Expect = 6.5
Identities = 21/141 (14%), Positives = 40/141 (28%), Gaps = 4/141 (2%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKL 177
L G G GK+TL L ++ +I++ L RE D + R+
Sbjct: 9 LTGTPGVGKTTLGKELASKS--GLKYINVGDLAREEQLYDGYDEEY-DCPILDEDRVVDE 65
Query: 178 AEQLVACEDDESQEQLMDIYDRLDDISADTAEARAANILHGLGFTKEMQQK-KTKDFSGG 236
+ + D + + L ++K
Sbjct: 66 LDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEI 125
Query: 237 WRMRIALARALYVKPHLLLLD 257
+++ A A Y + + L
Sbjct: 126 FQVLYEEATASYKEEIVHQLP 146
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.2 bits (59), Expect = 4.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 429 RLALVGPNGAGKSTLLNLI 447
L L+G GAGK T I
Sbjct: 2 NLVLMGLPGAGKGTQAEKI 20
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
{Bacillus alcalophilus [TaxId: 1445]}
Length = 360
Score = 27.7 bits (60), Expect = 4.8
Identities = 4/19 (21%), Positives = 10/19 (52%)
Query: 549 NHLDMETIDALADAINDFE 567
N + ++ AL + + F+
Sbjct: 339 NAVPIDACIALRELMIQFK 357
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 27.1 bits (59), Expect = 4.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 430 LALVGPNGAGKSTLLN 445
+VG +GK+TL+
Sbjct: 4 WQVVGYKHSGKTTLME 19
Score = 26.0 bits (56), Expect = 9.8
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 116 YGLLGLNGSGKSTLLAVLGNR 136
+ ++G SGK+TL+
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAA 24
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 27.5 bits (60), Expect = 4.9
Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 8/117 (6%)
Query: 416 IYRNLEFGIDLDTR-LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLH 474
+ + L+ DLD+ L L G G+GKS + + +G+ +
Sbjct: 32 VIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKS 91
Query: 475 ELLDLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVF 531
D +L E + + + L D VF
Sbjct: 92 TFDLF----TDILLMLKSEDDLLNFPSVE---HVTSVVLKRMICNALIDRPNTLFVF 141
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.2 bits (59), Expect = 5.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L +G +G GK+T L
Sbjct: 7 KLLALGDSGVGKTTFLY 23
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 27.1 bits (59), Expect = 5.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ L+G +G GKS LL+
Sbjct: 6 KVVLIGDSGVGKSNLLS 22
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 27.0 bits (59), Expect = 5.2
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L L+G +G GK+ +L
Sbjct: 8 KLLLIGDSGVGKTCVLF 24
Score = 26.3 bits (57), Expect = 8.2
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 10/58 (17%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLE 175
L+G +G GK+ +L I + +E+D +R++L+
Sbjct: 11 LIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK----------IRTIELDGKRIKLQ 58
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 27.0 bits (58), Expect = 5.2
Identities = 10/56 (17%), Positives = 14/56 (25%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVR 173
L G SGK + L L + S L E ++
Sbjct: 11 LTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQ 66
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.9 bits (58), Expect = 5.3
Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 429 RLALVGPNGAGKSTLLN-LIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISP 483
++ L+G G GKS+++ + P++ S + +Q+ + +
Sbjct: 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 61
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 27.2 bits (60), Expect = 5.4
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)
Query: 431 ALVGPNGAGKSTLLNL---IYGDLTPSVGMVRKNSHLRFARYHQHL--HELLDLDISPLD 485
++ G +GAG ST+ + I+ + ++ RF R +
Sbjct: 8 SVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDATFS 67
Query: 486 YMLQSFPEVKDREEMRKIIGRYGLTGRQQV 515
+ E + +E+ ++ YG TG+ +
Sbjct: 68 HFS---YEANELKELERVFREYGETGQGRT 94
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 5.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ LVG +G GK+ LL
Sbjct: 8 KVMLVGDSGVGKTCLLV 24
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 27.2 bits (59), Expect = 5.4
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 429 RLALVGPNGAGKSTLLNLI---YGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLD 485
+ L+G GAGK T + I YG S G + + + +D D
Sbjct: 2 NIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPD 61
Query: 486 YM 487
+
Sbjct: 62 EV 63
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 27.3 bits (59), Expect = 5.4
Identities = 12/97 (12%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Query: 428 TRLALVGPNGAGKSTLLNLI---YGDLTPSVG-MVRKNSHLRFARYHQHLHELLDLDISP 483
+ + ++G GAGK T + Y + S G ++R ++Y + + +
Sbjct: 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIV 68
Query: 484 LDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQ 520
+ + + ++ ++ + G +
Sbjct: 69 PQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAI 105
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.9 bits (58), Expect = 5.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L L+G GKS+++
Sbjct: 5 KLVLLGEAAVGKSSIVL 21
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 26.9 bits (58), Expect = 6.1
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 430 LALVGPNGAGKSTLLNLI 447
+ L G + AGKS ++ +
Sbjct: 6 IILNGGSSAGKSGIVRCL 23
Score = 26.5 bits (57), Expect = 8.3
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMP 154
L G + +GKS ++ L + + L MP
Sbjct: 8 LNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMP 44
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.7 bits (58), Expect = 6.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L L+G +G GKS LL
Sbjct: 8 KLLLIGNSGVGKSCLLL 24
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 26.8 bits (58), Expect = 6.2
Identities = 14/126 (11%), Positives = 30/126 (23%), Gaps = 11/126 (8%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQ 489
+ +VG G G +T+ + L F + + ++ +
Sbjct: 5 IFMVGARGCGMTTVGRELARAL-----------GYEFVDTDIFMQHTSGMTVADVVAAEG 53
Query: 490 SFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPHLLLLDEPTN 549
+ E + + + + Q R + AP L
Sbjct: 54 WPGFRRRESEALQAVATPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQA 113
Query: 550 HLDMET 555
L
Sbjct: 114 SLQAHQ 119
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 27.2 bits (59), Expect = 6.2
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 418 RNLEFGIDLDTRLALVGPNGAGKSTL-LNLIYGDLTPSVGMVRKNSHLRFARYHQHLHEL 476
G D+ + G G GK+ L + + A+ ++ +
Sbjct: 17 EMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSW 76
Query: 477 L----DLDISPLDYMLQSFPEVKDREEMRKIIGRYGLTGRQQVCPIRQLSD 523
+++ L ++ ++PE E+ +II + I LS
Sbjct: 77 GMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSA 127
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 27.0 bits (58), Expect = 6.4
Identities = 9/47 (19%), Positives = 15/47 (31%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHEL 476
L + G + +GK+TL N + L V +
Sbjct: 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHT 71
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 6.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
R+A+ G G GKS+L+
Sbjct: 4 RVAVFGAGGVGKSSLVL 20
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.8 bits (58), Expect = 6.6
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ L+G GK++L+
Sbjct: 5 KVVLLGEGCVGKTSLVL 21
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 26.5 bits (57), Expect = 6.6
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L +G GK++L+
Sbjct: 2 KLVFLGEQSVGKTSLIT 18
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.6 bits (57), Expect = 6.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
R+ L+G G GKSTL N
Sbjct: 5 RVVLIGEQGVGKSTLAN 21
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.5 bits (57), Expect = 6.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L LVG G GK+T +
Sbjct: 5 KLVLVGDGGTGKTTFVK 21
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 27.2 bits (59), Expect = 6.9
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 6/53 (11%)
Query: 429 RLALVGPNGAGKSTLLN-----LIYGDLTPSVGMVRKNSHLRFARYHQHLHEL 476
R+ + G G GKST ++ L +V V +S R
Sbjct: 53 RVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSST-RTGGSILGDKTR 104
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.6 bits (57), Expect = 6.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L +VG G GKS L
Sbjct: 8 KLVVVGGGGVGKSALTI 24
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 26.9 bits (58), Expect = 6.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 431 ALVGPNGAGKSTLLNLIY 448
+ G G+GK+T LN
Sbjct: 13 LIEGNIGSGKTTYLNHFE 30
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 27.0 bits (60), Expect = 7.1
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 104 QDTMLELNCGRRYGLLGLNGSGKSTLLAVLGNREVPVPDHIDIFHL----TREM 153
D + G + GL G G GK+ L+ L N +F TRE
Sbjct: 59 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 112
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 26.9 bits (58), Expect = 7.6
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 428 TRLALVGPNGAGKSTLLNLI 447
T + +VG GK+ + +
Sbjct: 3 TLIVMVGLPARGKTYISKKL 22
Score = 26.5 bits (57), Expect = 8.6
Identities = 10/84 (11%), Positives = 28/84 (33%)
Query: 118 LLGLNGSGKSTLLAVLGNREVPVPDHIDIFHLTREMPASDKSALTCVMEVDEERVRLEKL 177
++GL GK+ + L + F++ + K+ + + + L+
Sbjct: 7 MVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIR 66
Query: 178 AEQLVACEDDESQEQLMDIYDRLD 201
+ +A +D + +
Sbjct: 67 KQCALAALNDVRKFLSEEGGHVAV 90
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 26.4 bits (57), Expect = 7.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ +VG G GKS L
Sbjct: 6 KVIMVGSGGVGKSALTL 22
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 26.4 bits (57), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
+ ++G G GKS LL+
Sbjct: 6 KYIIIGDMGVGKSCLLH 22
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.5 bits (57), Expect = 7.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 427 DTRLALVGPNGAGKSTLLN 445
+ +LA+ G G GKS L+
Sbjct: 2 EVKLAIFGRAGVGKSALVV 20
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 26.7 bits (57), Expect = 8.2
Identities = 15/109 (13%), Positives = 32/109 (29%)
Query: 432 LVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDISPLDYMLQSF 491
L GP G GK+T +L+ +L + + + + LD +
Sbjct: 57 LYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEE 116
Query: 492 PEVKDREEMRKIIGRYGLTGRQQVCPIRQLSDGQKCRVVFAYLAWQAPH 540
+ + + I+ + QL+ + L +
Sbjct: 117 AQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERN 165
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 26.7 bits (59), Expect = 8.3
Identities = 6/27 (22%), Positives = 17/27 (62%)
Query: 105 DTMLELNCGRRYGLLGLNGSGKSTLLA 131
D+++ + G+R ++G +GK+++
Sbjct: 60 DSLVPIGRGQRELIIGDRQTGKTSIAI 86
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.1 bits (56), Expect = 8.7
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L L+G + GKS+L+
Sbjct: 8 KLVLLGESAVGKSSLVL 24
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.4 bits (57), Expect = 8.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 429 RLALVGPNGAGKSTLLN 445
+ ++G G GKS LL
Sbjct: 5 KYIIIGDTGVGKSCLLL 21
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 26.2 bits (57), Expect = 9.1
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 430 LALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDLDI 481
+ L G GAGK+TL G V+ ++ Y+ + D+
Sbjct: 36 VYLNGDLGAGKTTLTRG-MLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDL 86
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.1 bits (56), Expect = 9.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 429 RLALVGPNGAGKSTLLN 445
+L +VG G GKS L
Sbjct: 5 KLVVVGAGGVGKSALTI 21
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.1 bits (56), Expect = 9.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 429 RLALVGPNGAGKSTLLN 445
++ L+G G GKS+L+N
Sbjct: 8 KVILLGDGGVGKSSLMN 24
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 26.5 bits (57), Expect = 9.4
Identities = 18/152 (11%), Positives = 39/152 (25%), Gaps = 3/152 (1%)
Query: 360 AQSKEKTLAKMVNQGLTDKVTTDKTVTFTFPSCGKIPPPVIMVQNVSFRYSDDGPWIYRN 419
AQ ++ + + + + +F P C + + + NV + + +
Sbjct: 1 AQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYH 60
Query: 420 LEFGIDLDTRLALVGPNGAGKSTLLNLIYGDLTPSVGMVRKNSHLRFARYHQHLHELLDL 479
+ F + A + + + L V + R +
Sbjct: 61 VNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINA---GI 117
Query: 480 DISPLDYMLQSFPEVKDREEMRKIIGRYGLTG 511
D SF + K L G
Sbjct: 118 KGEEYDAAWNSFVVKSLVAQQEKAAADVQLRG 149
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.2 bits (56), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 429 RLALVGPNGAGKSTLLN 445
++A++G GKS+L
Sbjct: 6 KIAILGYRSVGKSSLTI 22
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 26.4 bits (58), Expect = 9.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 117 GLLGLNGSGKSTLLAVLGNREVPV 140
G++GL GKSTL L +
Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEA 29
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 26.1 bits (57), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 424 IDLDTR-LALVGPNGAGKSTL-LNLI 447
+D+ + + G +G GKS L LI
Sbjct: 11 VDVYGVGVLITGDSGIGKSETALELI 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,396,065
Number of extensions: 118511
Number of successful extensions: 810
Number of sequences better than 10.0: 1
Number of HSP's gapped: 752
Number of HSP's successfully gapped: 278
Length of query: 629
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 538
Effective length of database: 1,158,166
Effective search space: 623093308
Effective search space used: 623093308
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.1 bits)