BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10530
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61255|RL26_MOUSE 60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=2 SV=1
Length = 145
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 115/126 (91%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTS R KNRKRHFNAPSHIRR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|P61256|RL26_MACFA 60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1
Length = 145
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 115/126 (91%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTS R KNRKRHFNAPSHIRR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|P61254|RL26_HUMAN 60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1
Length = 145
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 115/126 (91%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTS R KNRKRHFNAPSHIRR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|P61257|RL26_BOVIN 60S ribosomal protein L26 OS=Bos taurus GN=RPL26 PE=2 SV=1
Length = 145
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 115/126 (91%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTS R KNRKRHFNAPSHIRR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|Q95WA0|RL26_LITLI 60S ribosomal protein L26 OS=Littorina littorea GN=RPL26 PE=2 SV=1
Length = 144
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 118/127 (92%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK NK+V+S R KNRKRHFNAPSH+RR+IMS+P+SKELRQKYN RSMP+RKDDEVQVVRG
Sbjct: 1 MKFNKMVSSDRGKNRKRHFNAPSHMRRKIMSSPMSKELRQKYNCRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
H+KGQQVGKVVQ YRKKFV++IE+IQR+K NGATVYVGIHPSK +IVKLKMDKDRK+I++
Sbjct: 61 HFKGQQVGKVVQVYRKKFVVHIERIQREKANGATVYVGIHPSKVLIVKLKMDKDRKRILD 120
Query: 134 RRAKGRA 140
+AK RA
Sbjct: 121 NKAKSRA 127
>sp|Q9UNX3|RL26L_HUMAN 60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1 PE=1
SV=1
Length = 145
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 115/126 (91%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTS R KNRKRHFNAPSH+RR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|P12749|RL26_RAT 60S ribosomal protein L26 OS=Rattus norvegicus GN=Rpl26 PE=1 SV=1
Length = 145
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 114/126 (90%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTS R KNRKRHFNAPSHIRR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGI PSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIRPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|Q2I0I6|RL26_AILME 60S ribosomal protein L26 OS=Ailuropoda melanoleuca GN=RPL26 PE=2
SV=1
Length = 145
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 113/126 (89%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK VTS R KNRKRHFNAPSHIRR+ +S+PLSKELRQKYNVRSMP+RKDDEVQVVRG
Sbjct: 1 MKSYPFVTSDRSKNRKRHFNAPSHIRRKTLSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
HYKGQQ+GKVVQ YRKK+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+E
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 134 RRAKGR 139
R+AK R
Sbjct: 121 RKAKSR 126
>sp|P47832|RL26_CHICK 60S ribosomal protein L26 (Fragment) OS=Gallus gallus GN=RPL26 PE=2
SV=1
Length = 128
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 103/109 (94%)
Query: 31 HFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVVQSYRKK 90
HFNAPSHIRR+IMS+PLSKELRQKYNVRSMP+RKDDEVQVVRGHYKGQQ+GKVVQ YRKK
Sbjct: 1 HFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKK 60
Query: 91 FVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIERRAKGR 139
+VIYIE++QR+K NG TV+VGIHPSK VI +LK+DKDRKKI+ER+AK R
Sbjct: 61 YVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR 109
>sp|P51414|RL261_ARATH 60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2
SV=2
Length = 146
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 108/128 (84%), Gaps = 1/128 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTSSRRKNRK HF A S RR IMS+PLS +LRQKYNVRSMP+RKDDEVQ+VRG
Sbjct: 1 MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
YKG++ GKVVQ YR+K+VI+IE+I R+KVNG TV VGI PSK VI KL++DKDRK ++E
Sbjct: 61 TYKGRE-GKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLE 119
Query: 134 RRAKGRAA 141
R+AKGRAA
Sbjct: 120 RKAKGRAA 127
>sp|Q9FJX2|RL262_ARATH 60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2
SV=1
Length = 146
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 109/128 (85%), Gaps = 1/128 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N V+SSRRKNRK HF APS +RR +MS+PLSK+LR K+NVRSMP+RKDDEVQVVRG
Sbjct: 1 MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
+KG++ GKV+Q YR+K+VI+IE+I R+KVNG+TV VG++ S +I KL++DKDRK ++E
Sbjct: 61 TFKGRE-GKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLE 119
Query: 134 RRAKGRAA 141
R+A GRAA
Sbjct: 120 RKANGRAA 127
>sp|Q39411|RL26_BRARA 60S ribosomal protein L26 OS=Brassica rapa GN=RPL26 PE=2 SV=1
Length = 146
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 104/128 (81%), Gaps = 1/128 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N VTSSRR+NRK HF A S RR MS+PLS +LRQKYNVRSMP+RKDDE Q+VRG
Sbjct: 1 MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
YKG++ GK+ Q YR+K VI+IE++ R+KVNG TV VG+ P+K VI KL++DKDRK ++E
Sbjct: 61 TYKGRE-GKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLE 119
Query: 134 RRAKGRAA 141
R+AKGRAA
Sbjct: 120 RKAKGRAA 127
>sp|Q19869|RL26_CAEEL 60S ribosomal protein L26 OS=Caenorhabditis elegans GN=rpl-26 PE=3
SV=1
Length = 142
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 104/127 (81%), Gaps = 1/127 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK+N V+S K+RK HFNAPSH RRRIMSAPL+KELR K+ +R++P+R DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
+KG G+V++ YRKKFVI+I+KI R+K NG+TV++GIHPSK I KLK+DKDR+ ++E
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVE 119
Query: 134 RRAKGRA 140
R+A GR+
Sbjct: 120 RKAAGRS 126
>sp|P78946|RL26_SCHPO 60S ribosomal protein L26 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl26 PE=3 SV=1
Length = 126
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK ++ VTSSRRK RK HF APS +RR +MSAPLSKELR++Y +RS+PVR+DD++ V+RG
Sbjct: 1 MKFSRDVTSSRRKQRKAHFGAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
KG++ GK+ YRKKF++ IE++ R+K NGA+ VGI SK VI KL +DKDRK +I
Sbjct: 61 SNKGRE-GKITSVYRKKFLLLIERVTREKANGASAPVGIDASKVVITKLHLDKDRKDLIV 119
Query: 134 RRA 136
R+
Sbjct: 120 RKG 122
>sp|Q23F79|RL26_TETTS 60S ribosomal protein L26 OS=Tetrahymena thermophila (strain SB210)
GN=RPL26 PE=1 SV=2
Length = 135
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK + V+S+RRK RK HF +PSH+R+ +MSA LSK+LR KYNVRSMPVRKDDEV +VRG
Sbjct: 1 MKTHVEVSSARRKQRKAHFASPSHLRQTLMSAHLSKDLRSKYNVRSMPVRKDDEVLIVRG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
+KG + GKV Q YRKK+ I++EKI ++K+NGA + + S+ V+ KLK+DK R+ ++
Sbjct: 61 KFKGNK-GKVTQVYRKKWAIHVEKISKNKLNGAPYQIPLSASQLVLTKLKLDKSRQSLLT 119
Query: 134 RRA 136
R+A
Sbjct: 120 RKA 122
>sp|P53221|RL26B_YEAST 60S ribosomal protein L26-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL26B PE=1 SV=2
Length = 127
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 20 VTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQ 79
V+S RRK RK +F APS RR ++SAPLSKELR +Y ++++P+R+DDEV VVRG KGQ+
Sbjct: 8 VSSDRRKARKAYFTAPSSERRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 80 VGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIERRA 136
GK+ YR KF + ++K+ ++KVNGA+V + +HPSK VI KL +DKDRK +I+R+
Sbjct: 68 -GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG 123
>sp|P05743|RL26A_YEAST 60S ribosomal protein L26-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL26A PE=1 SV=3
Length = 127
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 20 VTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQ 79
V+S RRK RK +F APS RR ++SAPLSKELR +Y ++++P+R+DDEV VVRG KGQ+
Sbjct: 8 VSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE 67
Query: 80 VGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIERRA 136
GK+ YR KF + ++K+ ++KVNGA+V + +HPSK VI KL +DKDRK +I+R+
Sbjct: 68 -GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG 123
>sp|Q54QM8|RL26_DICDI 60S ribosomal protein L26 OS=Dictyostelium discoideum GN=rpl26 PE=3
SV=1
Length = 139
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N V+SSRRK+RK HF A S RR MSA LS +LR KYNVRS+P+RKDDEV+VV G
Sbjct: 1 MKRNTNVSSSRRKSRKAHFTASSGERRIRMSAALSHDLRTKYNVRSLPIRKDDEVRVVCG 60
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKIIE 133
K + GKVV YRKK+VI+I+K+ K NG T +G+ PS ++ KLK+DKDRK ++E
Sbjct: 61 DNKNHE-GKVVACYRKKYVIHIDKLTVTKTNGNTAQIGVSPSNVILTKLKLDKDRKALLE 119
Query: 134 RRAKGRAA 141
R+ + AA
Sbjct: 120 RKNRTVAA 127
>sp|O59429|RL24_PYRHO 50S ribosomal protein L24P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl24p PE=3 SV=2
Length = 121
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 91/124 (73%), Gaps = 5/124 (4%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK+N + RK RK +NAP H+R+++MSAPLSKELR+KY VR++PVR D+V+++RG
Sbjct: 1 MKMN---SKQPRKQRKFLYNAPLHVRQKMMSAPLSKELREKYKVRNLPVRVGDKVRIMRG 57
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKD-RKKII 132
+KG + GKVV+ K++ IY+E + KVNG V+ IHPS +I++L +D + RKKII
Sbjct: 58 DFKGYE-GKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVMIIELNLDDEKRKKII 116
Query: 133 ERRA 136
ERRA
Sbjct: 117 ERRA 120
>sp|Q8U010|RL24_PYRFU 50S ribosomal protein L24P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl24p PE=1 SV=2
Length = 121
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 18 KLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKG 77
K+ + RK RK +NAP H+R+++MSAPLS+ELR+KY VR++PVR D+V+++RG YKG
Sbjct: 2 KISSKQPRKQRKFLYNAPLHVRQKLMSAPLSRELREKYKVRNLPVRVGDKVRIMRGDYKG 61
Query: 78 QQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRA 136
+ GKVV+ K++ IY+E K NG V+ IHPS +I++L + D+ RKKIIERRA
Sbjct: 62 HE-GKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLEDEKRKKIIERRA 120
>sp|Q9V1U7|RL24_PYRAB 50S ribosomal protein L24P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl24p PE=3 SV=1
Length = 121
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
M+LN + RK RK +NAP H+R+++M+APLSKELR+KY +R++PVR D+V+++RG
Sbjct: 1 MRLN---SKQPRKQRKFLYNAPLHLRQKMMAAPLSKELREKYKIRNLPVRVGDKVRIMRG 57
Query: 74 HYKGQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKD-RKKII 132
+KG + GKVV+ K++ IY+E K NG V+ IHPS +I++L +D + RKKII
Sbjct: 58 DFKGHE-GKVVEVDLKRYRIYVEGATLRKTNGTEVFYPIHPSNVMIIELNLDDERRKKII 116
Query: 133 ERRA 136
ERRA
Sbjct: 117 ERRA 120
>sp|Q5JJF9|RL24_PYRKO 50S ribosomal protein L24P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl24p PE=3 SV=1
Length = 121
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 18 KLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKG 77
KL RK RK +NAP H+R +IMSAPLSKELR+KY VR++P+R D+V+V+RG +KG
Sbjct: 2 KLDMKQPRKQRKFLYNAPLHLRGKIMSAPLSKELREKYGVRNLPIRVGDKVKVMRGDFKG 61
Query: 78 QQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRA 136
+ GKVV+ +++ I++E + K +G V+ +HPS +IV+L + D+ R+KIIERRA
Sbjct: 62 VE-GKVVEVDLRRYRIHVEGVTHKKTDGTEVFYPLHPSNVMIVELNLEDEKREKIIERRA 120
>sp|A3DNB8|RL24_STAMF 50S ribosomal protein L24P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl24p PE=3 SV=1
Length = 152
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Query: 21 TSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQV 80
+S K RK FN P H+R ++ +APLSKELR+KY V+ +PVRK D V+++RG +KG +
Sbjct: 6 SSKPSKQRKALFNMPLHLRHKLFNAPLSKELREKYGVKKLPVRKGDVVRIMRGDWKGHE- 64
Query: 81 GKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERR 135
GKVV+ ++ +Y+E +QR K + VY IHPSK +I+KL + DK R+KIIERR
Sbjct: 65 GKVVRIDLRRVRLYVEGVQRKKADQTPVYYPIHPSKVMIIKLDLSDKWRRKIIERR 120
>sp|B1L777|RL24_KORCO 50S ribosomal protein L24P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl24p PE=3 SV=1
Length = 131
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 26 KNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVVQ 85
K RK +NAP H R +IMSAPLS+EL+ KY + S+P+RK D V+V+RG Y+G + G+V+
Sbjct: 10 KQRKYLYNAPIHHRGKIMSAPLSEELKSKYGINSIPIRKGDRVKVMRGDYRGTE-GEVIS 68
Query: 86 SYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRA 136
RK++ I ++ I R K +G V V IHPSK VI KL + D+ RK+++ER+
Sbjct: 69 VDRKRYRIAVKGIVRRKADGTEVPVPIHPSKVVITKLYLKDEARKRLLERKG 120
>sp|Q8TW19|RL24_METKA 50S ribosomal protein L24P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl24p PE=3 SV=1
Length = 149
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Query: 21 TSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQV 80
+S RK RK FNAP H R+++MSA L ELR+K+N RS+PVR+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 81 GKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKD-RKKIIER 134
G+VV+ K+ IY+E ++ NG VY IHPS +I++ +D R+KIIER
Sbjct: 65 GEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>sp|A2BMD0|RL24_HYPBU 50S ribosomal protein L24P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl24p PE=3 SV=1
Length = 149
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Query: 21 TSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQV 80
+S RK R+ FNAP H R+++M+APLS ELR++Y +RS+PVR DEV ++RG +KG +
Sbjct: 6 SSQPRKQRRALFNAPLHKRQKLMAAPLSPELRKQYGIRSLPVRVGDEVVIMRGDFKGHR- 64
Query: 81 GKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKK-IIERRAKGR 139
GKVV+ ++ I++E + G Y IHPS +IV L +D +R++ IIER+ + R
Sbjct: 65 GKVVRVDLRRMRIFVEGVTITNARGEPRYYPIHPSNVMIVSLNLDDERRRQIIERKRRQR 124
>sp|O26122|RL24_METTH 50S ribosomal protein L24P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl24p PE=3 SV=1
Length = 117
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Query: 25 RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVV 84
RK RK + AP H RR++MSA LS+ELR++Y RS+P+RK D+V+++RG ++G + GKV
Sbjct: 6 RKQRKYIYEAPLHARRKMMSANLSRELREEYGRRSLPLRKGDKVEILRGDFRGHE-GKVE 64
Query: 85 QSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRK-KIIERRA 136
+ K++ +Y+E KV+G TVY +HPS IV L +D +++ KI+ER+
Sbjct: 65 KVDLKRYRVYVEGATIQKVDGTTVYFPLHPSNLRIVDLNLDDEKRIKILERKG 117
>sp|A4WLL3|RL24_PYRAR 50S ribosomal protein L24P OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl24p PE=3 SV=1
Length = 122
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
Query: 19 LVTSSR-RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKG 77
+ TS++ RK R FNAP H+R ++ +A LS EL +K V+ +PVR+ D V ++RG +KG
Sbjct: 3 ITTSAQPRKQRLALFNAPLHLRHKLFNAKLSPELEKKLGVKRLPVRRGDTVMILRGDFKG 62
Query: 78 QQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRA 136
GKVV+ KK IY+E R G TVY IHPSK +IV + M DK R+KIIERR
Sbjct: 63 -VTGKVVRVDLKKVRIYVEGATRTNSRGQTVYYPIHPSKVMIVDVDMSDKARQKIIERRK 121
Query: 137 K 137
K
Sbjct: 122 K 122
>sp|A8ACD3|RL24_IGNH4 50S ribosomal protein L24P OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl24p PE=3 SV=1
Length = 125
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
Query: 26 KNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVVQ 85
K RK +NAP H+R + M+APLSKELR+KY V+ +PVRK D V++VRG ++G + G V +
Sbjct: 11 KQRKFLYNAPLHLRHKFMNAPLSKELREKYGVKRLPVRKGDTVKIVRGKFRGHE-GTVAK 69
Query: 86 SYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKL-KMDKDRKKIIERRAK 137
KK IY++ + G + IHPSK +I KL ++DK R+KIIERR K
Sbjct: 70 VDLKKARIYVDGATIENSRGEQRFYPIHPSKVIITKLGEVDKVRQKIIERRKK 122
>sp|Q9YF83|RL24_AERPE 50S ribosomal protein L24P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl24p
PE=3 SV=1
Length = 132
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 19 LVTSSR--RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYK 76
++T SR RK R+ + AP H R++++SA LS ELR+KY VRS+PVRK D+V+V+RG +K
Sbjct: 3 VLTRSRQPRKQRRALYRAPLHARQKLVSATLSPELREKYGVRSLPVRKGDKVRVMRGDFK 62
Query: 77 GQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIE 133
G + GKVV+ ++ IYI+ + K +G V+ IHPS +IV+L + D+ RKK+IE
Sbjct: 63 GHE-GKVVKVDLRRLRIYIDGVTVTKADGTPVFRPIHPSNVMIVELDLSDEYRKKMIE 119
>sp|Q8ZTD4|RL24_PYRAE 50S ribosomal protein L24P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl24p PE=3 SV=1
Length = 123
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 25 RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVV 84
RK R+ + AP H+RR++ +A LS EL +K V+ +PVR+ D V ++RG +KG GKVV
Sbjct: 10 RKQRRSLYKAPLHLRRKLFNAKLSPELAKKLGVKRLPVRRGDTVLILRGDFKG-VTGKVV 68
Query: 85 QSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRAK 137
+ K+ IY+E R G TVY IHPSK +IV + + DK R+KIIERR K
Sbjct: 69 KVDLKRVRIYVEGATRTNSRGQTVYYPIHPSKVMIVDVDLSDKARQKIIERRKK 122
>sp|A3MWZ8|RL24_PYRCJ 50S ribosomal protein L24P OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl24p PE=3 SV=1
Length = 128
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
Query: 21 TSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQV 80
++ RK R + AP H+RR++++A LS EL++K V+ +PVR+ D V ++RG +KG
Sbjct: 6 SAQPRKQRLSLYAAPLHLRRKLLNAKLSPELQKKLGVKRLPVRRGDTVLIMRGDFKG-VT 64
Query: 81 GKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRAKGR 139
GKVV+ K+ I++E R G TVY IHPSK +IV + + DK R+K+IERR +G+
Sbjct: 65 GKVVKVDLKRVRIFVEGATRTNSRGQTVYYPIHPSKVMIVDVDLSDKARQKLIERRKRGQ 124
>sp|P54038|RL24_METJA 50S ribosomal protein L24P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl24p PE=3 SV=1
Length = 120
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 25 RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVV 84
RK RK FNAP H+RR++MSA LSKEL++K ++PVRK D V+++RG +KG + G+V+
Sbjct: 10 RKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVI 68
Query: 85 QSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKI 131
+ K++ IY+E + +G V IHPS +I+KL DKD K+
Sbjct: 69 KVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEKRF 114
>sp|A8MB21|RL24_CALMQ 50S ribosomal protein L24P OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rpl24p
PE=3 SV=1
Length = 143
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 19 LVTSSR-RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKG 77
L +SS+ RK K AP H RRR+++APLSK+L+++ +R +PVR D V ++RG +KG
Sbjct: 4 LTSSSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKG 63
Query: 78 QQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKL-KMDKDRKKIIERRA 136
+ GKV + K+ IY++ K +G VY IHPSK VIV+L + DK R I++
Sbjct: 64 TR-GKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTR 122
Query: 137 KGRAA 141
K R A
Sbjct: 123 KAREA 127
>sp|Q975J1|RL24_SULTO 50S ribosomal protein L24P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl24p PE=3 SV=2
Length = 137
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 19 LVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQ 78
+V+ K R +N P H R ++++A LSKEL+Q+Y ++ + +RK D V+V+RG
Sbjct: 1 MVSHKPSKQRLLLYNLPKHQRHKLLTAKLSKELQQQYGIKRLAIRKGDTVKVMRGDKDVL 60
Query: 79 QV-GKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRA 136
GKVV+ RK I IE + R K +G VY IH SK +I KL + D RK+IIER+
Sbjct: 61 NFEGKVVEVNRKTGRIAIEGLTRKKADGTPVYRWIHASKVIITKLDLSDAKRKEIIERKR 120
Query: 137 KGR 139
K R
Sbjct: 121 KAR 123
>sp|O05633|RL24_SULAC 50S ribosomal protein L24P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl24p PE=3 SV=2
Length = 134
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
Query: 19 LVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQ 78
+++S K RK +N P+H+R ++++A LS++L ++Y ++ + +RK D V+++RG G
Sbjct: 1 MISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGY 60
Query: 79 QVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRAK 137
+ GKVV+ RK+ + IE + + K +G VYV +H SK +I KL DK+R IER+ K
Sbjct: 61 E-GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRK 119
Query: 138 GR 139
R
Sbjct: 120 MR 121
>sp|A6UWU9|RL24_META3 50S ribosomal protein L24P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl24p PE=3 SV=1
Length = 119
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 19 LVTSSR-RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKG 77
L TS + RK RK +NAP H R ++MSA LSK+L++KYN ++PV+ D V+++RG +KG
Sbjct: 3 LTTSKQPRKQRKALYNAPLHARNKLMSAMLSKDLKEKYNKNALPVKTGDTVKILRGTFKG 62
Query: 78 QQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRK 129
+ G+V + K + IY+E K +G IHPS +IVK+ DR+
Sbjct: 63 IE-GEVSKVDYKSYKIYVEGAVNRKQDGNESLYPIHPSNVMIVKMDDSDDRR 113
>sp|A0B9V9|RL24_METTP 50S ribosomal protein L24P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl24p PE=3 SV=1
Length = 116
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 19 LVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQ 78
+V+ RK RK FNAP H+R+R M A LS ELR++Y RS V+K D V+V+RG G
Sbjct: 1 MVSKQPRKQRKARFNAPLHMRQRFMHAMLSPELRKEYKKRSAQVKKGDTVKVMRGDNAGV 60
Query: 79 QVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKD-RKKIIER 134
+ G+V+ K+ VI + + + +G V IHPS +I KL +D D R+KI R
Sbjct: 61 E-GEVLSVDLKRCVITVAGVSNFRADGTEVPRPIHPSNVMITKLDLDDDEREKIFSR 116
>sp|P41960|RL26_BRUPA 60S ribosomal protein L26 (Fragment) OS=Brugia pahangi PE=3 SV=1
Length = 60
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 48/60 (80%)
Query: 14 MKLNKLVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRG 73
MK N+ V+SS RK RK FNAPSHIRR++MSAP +K+LR K+ +RS+P+R DDEV V RG
Sbjct: 1 MKQNQFVSSSARKARKAPFNAPSHIRRKLMSAPSTKDLRNKHGIRSIPIRIDDEVTVTRG 60
>sp|A6VGZ6|RL24_METM7 50S ribosomal protein L24P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl24p PE=3 SV=1
Length = 119
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Query: 19 LVTSSR--RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYK 76
++T+S+ RK RK +NAP H+R +M+A LSKEL++K+N S+PV+K D V+V+RG++K
Sbjct: 2 VLTNSKQPRKQRKALYNAPLHLRNSVMAAMLSKELKEKFNKNSLPVKKGDTVKVLRGNFK 61
Query: 77 GQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKL 122
G + G+V + + I +E + K +G IHPS +I KL
Sbjct: 62 GIE-GEVSKVDYAGYKIIVEGVVNKKQDGTETAYPIHPSNVMITKL 106
>sp|A4FWB0|RL24_METM5 50S ribosomal protein L24P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl24p PE=3 SV=1
Length = 119
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Query: 19 LVTSSR--RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYK 76
++T+S+ RK RK +NAP H+R +M+A LSKEL++K+N S+PV+K D V+V+RG++K
Sbjct: 2 VLTNSKQPRKQRKALYNAPLHLRNSVMAAMLSKELKEKFNKNSLPVKKGDTVKVLRGNFK 61
Query: 77 GQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKL 122
G + G+V + + I +E + K +G IHPS +I KL
Sbjct: 62 GIE-GEVSKVDYAGYKIIVEGVVNKKQDGTETAYPIHPSNVMITKL 106
>sp|A1RWS4|RL24_THEPD 50S ribosomal protein L24P OS=Thermofilum pendens (strain Hrk 5)
GN=rpl24p PE=3 SV=1
Length = 131
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 21 TSSRR-KNRKRH-FNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQ 78
TSS+ K RKR ++AP HIR + + APLS EL+QK ++ + VRK D V +VRG +KG
Sbjct: 5 TSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGH 64
Query: 79 QVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERR 135
+ GKV KK I++E K +G V IHPSK V+ +L + D RK+++ER+
Sbjct: 65 E-GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERK 121
>sp|A1RS05|RL24_PYRIL 50S ribosomal protein L24P OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl24p PE=3 SV=1
Length = 123
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 25 RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVV 84
R+ R + AP H+R ++ +A LS +L++K V+ +PVR+ D V ++RG +KG GKVV
Sbjct: 10 RRQRLSLYTAPLHLRHKLFNAKLSPDLQKKLGVKRLPVRRGDTVMIMRGDFKG-VTGKVV 68
Query: 85 QSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKM-DKDRKKIIERRAK 137
+ KK IY+E R G TVY IHPSK +I+ + DK R+KII+RR K
Sbjct: 69 KVDLKKVRIYVEGATRTNSKGQTVYYPIHPSKVMIIDIDTSDKIRQKIIQRRKK 122
>sp|Q6LXE2|RL24_METMP 50S ribosomal protein L24P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl24p PE=3 SV=1
Length = 119
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 19 LVTSSR--RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYK 76
++T+S+ RK RK +NAP H+R +MSA L+KEL++KY S+PV+K D V+V+RG++K
Sbjct: 2 VLTNSKQPRKQRKALYNAPLHLRNSVMSAMLAKELKEKYAKNSLPVKKGDTVKVLRGNFK 61
Query: 77 GQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKL 122
G + G+V + + I +E + K +G IHPS +I KL
Sbjct: 62 GIE-GEVSKVDYAGYKIIVEGVVNKKQDGNETAYPIHPSNVMITKL 106
>sp|Q2NFW8|RL24_METST 50S ribosomal protein L24P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl24p PE=3 SV=1
Length = 117
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 25 RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVV 84
RK RK + AP H R MS LS +L++++N RS PVRK D V++VRG ++G + GKV
Sbjct: 6 RKQRKALYTAPLHKRHNSMSVHLSDDLKEEFNRRSFPVRKGDSVEIVRGDFRGTE-GKVE 64
Query: 85 QSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRK 129
K + + ++ K +G+ +Y IHPS V+ ++ +D +R+
Sbjct: 65 GVDLKNYRVLVDGASSQKQDGSKLYQPIHPSNLVLTEIYLDDERR 109
>sp|A6UQ55|RL24_METVS 50S ribosomal protein L24P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl24p PE=3 SV=1
Length = 119
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 19 LVTSSR--RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYK 76
++T+S+ RK RK +NAP H+R +MSA LSK L++KY ++PV+K D V+V+RG +K
Sbjct: 2 VLTNSKQPRKQRKALYNAPLHLRNSVMSAMLSKALKEKYGKNALPVKKGDTVKVLRGSFK 61
Query: 77 GQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKI 131
G + G+V + + I +E + K +G IHPS +I K++ D D K+
Sbjct: 62 GIE-GEVSKVNYSGYKIIVEGVVNKKQDGKETPYPIHPSNVMITKME-DSDEKRF 114
>sp|P14034|RL24_METVA 50S ribosomal protein L24P OS=Methanococcus vannielii GN=rpl24p
PE=3 SV=1
Length = 119
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 19 LVTSSR--RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYK 76
++T+S+ RK RK +NAP H+R +MSA LSK L++KY ++PV+K D V+V+RG +K
Sbjct: 2 VLTNSKQPRKQRKALYNAPLHLRNSVMSAMLSKALKEKYGKNALPVKKGDTVKVLRGSFK 61
Query: 77 GQQVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKKI 131
G + G+V + + I +E + K +G IHPS +I K++ D D K+
Sbjct: 62 GIE-GEVSKVNYSGYKIIVEGVVNKKQDGKETPYPIHPSNVMITKME-DSDEKRF 114
>sp|A5UL77|RL24_METS3 50S ribosomal protein L24P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl24p PE=3 SV=1
Length = 117
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 25 RKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQQVGKVV 84
RK RK +NAP+H R + MSA LSK+LR RS+P+RK D+VQV+RG +KG + G V+
Sbjct: 6 RKQRKALYNAPAHARGKHMSATLSKDLRADIGKRSLPIRKGDKVQVLRGDFKGHE-GAVL 64
Query: 85 QSYRKKFVIYIEKIQRDKVNGATVYVGIHPS 115
+ I IE++ K +G V++ + PS
Sbjct: 65 GVDYGSYKITIEEVTLSKPDGTAVFLPVDPS 95
>sp|Q46GA6|RL24_METBF 50S ribosomal protein L24P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl24p PE=3 SV=1
Length = 116
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 19 LVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQ 78
+V+ RK RK +NAP H+R++ M A LS+ L ++Y RS V D V+V+RG YKG
Sbjct: 1 MVSKQPRKQRKARYNAPLHVRQKFMGARLSEALSKEYGTRSAAVIAGDTVKVMRGDYKGT 60
Query: 79 QVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRK 129
+ GKV + I ++ + KV+G V I+PS +I KL++ +R+
Sbjct: 61 E-GKVQAVSLQDGTISVDGVISTKVDGTEVPRPIYPSNVMITKLELKDERR 110
>sp|Q9UX95|RL24_SULSO 50S ribosomal protein L24P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl24p PE=3 SV=1
Length = 119
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 19 LVTSSRRKNRKRHFNAPSHIRRRIMSAPLSKELRQKYNVRSMPVRKDDEVQVVRGHYKGQ 78
+V+ K RK + P H R++++ A +S ++ +Y ++ + VRK D V+V+RG G+
Sbjct: 1 MVSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGK 60
Query: 79 QVGKVVQSYRKKFVIYIEKIQRDKVNGATVYVGIHPSKCVIVKLKMDKDRKK 130
+ GKVV+ K + IE I R KV+G VYV IH SK +I KL + R++
Sbjct: 61 E-GKVVEVNTKTGRLAIEGITRKKVDGTPVYVWIHASKVMITKLDLSDPRRR 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,737,400
Number of Sequences: 539616
Number of extensions: 1687480
Number of successful extensions: 5365
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 5226
Number of HSP's gapped (non-prelim): 168
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)