Query psy10531
Match_columns 564
No_of_seqs 268 out of 1720
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 20:42:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l0q_A Xylulose kinase; xlylul 100.0 3.8E-86 1.3E-90 733.2 41.2 467 1-563 4-475 (554)
2 3ifr_A Carbohydrate kinase, FG 100.0 5.5E-85 1.9E-89 716.4 40.0 422 1-562 6-432 (508)
3 3ll3_A Gluconate kinase; xylul 100.0 1.7E-84 5.8E-89 711.9 42.2 420 1-562 3-425 (504)
4 3hz6_A Xylulokinase; xylulose, 100.0 2.4E-84 8.3E-89 711.8 39.4 424 1-562 4-435 (511)
5 3jvp_A Ribulokinase; PSI-II, N 100.0 3.4E-83 1.2E-87 711.7 38.0 433 1-563 4-473 (572)
6 2itm_A Xylulose kinase, xylulo 100.0 7.1E-81 2.4E-85 680.7 38.0 418 3-563 1-419 (484)
7 2p3r_A Glycerol kinase; glycer 100.0 7.8E-81 2.7E-85 683.8 36.1 415 1-562 2-433 (510)
8 3h3n_X Glycerol kinase; ATP-bi 100.0 1.9E-80 6.4E-85 680.5 38.7 415 1-562 4-435 (506)
9 4e1j_A Glycerol kinase; struct 100.0 6.8E-80 2.3E-84 677.6 39.1 412 2-562 26-457 (520)
10 3g25_A Glycerol kinase; IDP007 100.0 5.6E-80 1.9E-84 676.1 38.3 416 1-563 5-437 (501)
11 3i8b_A Xylulose kinase; strain 100.0 2.6E-79 8.8E-84 671.6 34.1 407 2-563 5-457 (515)
12 3ezw_A Glycerol kinase; glycer 100.0 3.8E-79 1.3E-83 673.1 34.6 416 2-563 4-435 (526)
13 2zf5_O Glycerol kinase; hypert 100.0 2.3E-78 7.8E-83 662.9 37.1 415 1-563 2-426 (497)
14 2w40_A Glycerol kinase, putati 100.0 4.3E-78 1.5E-82 661.7 37.6 415 1-563 3-440 (503)
15 2dpn_A Glycerol kinase; thermu 100.0 7.7E-78 2.6E-82 658.4 38.7 415 1-563 1-431 (495)
16 2d4w_A Glycerol kinase; alpha 100.0 1.2E-77 4.2E-82 658.0 34.7 415 2-563 2-436 (504)
17 4bc3_A Xylulose kinase; transf 100.0 4.8E-77 1.7E-81 657.8 32.2 413 1-563 9-467 (538)
18 3h6e_A Carbohydrate kinase, FG 100.0 1.3E-74 4.5E-79 628.4 31.7 401 1-563 5-421 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 1.5E-68 5.1E-73 584.4 26.0 405 1-562 3-425 (489)
20 1hux_A Activator of (R)-2-hydr 99.4 4.8E-12 1.6E-16 127.0 15.4 82 469-562 158-240 (270)
21 3h3n_X Glycerol kinase; ATP-bi 98.8 4.6E-09 1.6E-13 114.5 8.6 82 370-452 342-434 (506)
22 3g25_A Glycerol kinase; IDP007 98.8 4.4E-09 1.5E-13 114.6 8.1 82 370-452 343-435 (501)
23 4e1j_A Glycerol kinase; struct 98.8 4.7E-09 1.6E-13 114.8 8.2 82 370-452 362-456 (520)
24 3ezw_A Glycerol kinase; glycer 98.8 4.6E-09 1.6E-13 115.1 8.1 83 369-452 340-433 (526)
25 2p3r_A Glycerol kinase; glycer 98.8 5.2E-09 1.8E-13 114.2 8.2 86 370-456 340-437 (510)
26 3ifr_A Carbohydrate kinase, FG 98.8 7.7E-09 2.6E-13 112.8 7.8 83 369-453 339-432 (508)
27 3l0q_A Xylulose kinase; xlylul 98.8 8.3E-09 2.8E-13 113.8 7.9 83 369-453 378-474 (554)
28 3ll3_A Gluconate kinase; xylul 98.7 1.1E-08 3.9E-13 111.4 7.9 86 369-455 332-428 (504)
29 3jvp_A Ribulokinase; PSI-II, N 98.7 1.1E-08 3.6E-13 113.4 7.3 82 369-452 378-471 (572)
30 2d4w_A Glycerol kinase; alpha 98.7 2.2E-08 7.6E-13 109.1 8.4 82 370-452 342-434 (504)
31 2dpn_A Glycerol kinase; thermu 98.7 2.8E-08 9.5E-13 108.1 8.3 82 370-452 337-429 (495)
32 2w40_A Glycerol kinase, putati 98.6 4.1E-08 1.4E-12 107.0 8.4 82 370-452 345-438 (503)
33 3hz6_A Xylulokinase; xylulose, 98.6 5.3E-08 1.8E-12 106.3 9.2 81 369-452 343-434 (511)
34 2itm_A Xylulose kinase, xylulo 98.6 3E-08 1E-12 107.5 6.2 85 369-455 325-420 (484)
35 2zf5_O Glycerol kinase; hypert 98.6 5.7E-08 1.9E-12 105.7 7.9 82 370-453 334-425 (497)
36 3i8b_A Xylulose kinase; strain 98.5 2E-07 6.7E-12 101.8 9.4 84 369-455 363-459 (515)
37 3vgl_A Glucokinase; ROK family 98.2 3.9E-06 1.3E-10 85.8 10.2 89 1-113 1-90 (321)
38 2qm1_A Glucokinase; alpha-beta 98.1 8.4E-06 2.9E-10 83.1 9.9 89 2-109 6-97 (326)
39 3h6e_A Carbohydrate kinase, FG 98.0 7.2E-06 2.5E-10 88.6 8.5 79 369-454 334-421 (482)
40 2hoe_A N-acetylglucosamine kin 97.9 3.7E-05 1.3E-09 80.5 10.9 90 2-110 87-179 (380)
41 2ch5_A NAGK protein; transfera 97.9 2.3E-05 7.7E-10 80.7 9.1 70 1-76 4-77 (347)
42 2e2o_A Hexokinase; acetate and 97.9 2.1E-05 7.3E-10 79.2 8.6 65 1-75 1-65 (299)
43 4db3_A Glcnac kinase, N-acetyl 97.9 4.7E-05 1.6E-09 78.0 11.2 84 3-109 25-110 (327)
44 1z05_A Transcriptional regulat 97.9 5.3E-05 1.8E-09 80.6 11.7 88 3-110 109-199 (429)
45 1zc6_A Probable N-acetylglucos 97.9 4.6E-05 1.6E-09 77.1 10.7 66 3-75 12-81 (305)
46 1z6r_A MLC protein; transcript 97.8 4.2E-05 1.4E-09 80.7 9.8 78 2-91 85-165 (406)
47 3r8e_A Hypothetical sugar kina 97.8 2.1E-05 7.1E-10 80.4 7.1 91 2-113 19-111 (321)
48 2yhw_A Bifunctional UDP-N-acet 97.8 8.9E-05 3E-09 76.2 10.4 77 2-91 30-109 (343)
49 4bc3_A Xylulose kinase; transf 97.6 4.6E-05 1.6E-09 83.5 6.6 77 369-452 372-465 (538)
50 4htl_A Beta-glucoside kinase; 97.5 0.00025 8.6E-09 71.4 9.7 72 2-91 4-76 (297)
51 3htv_A D-allose kinase, alloki 97.5 6.9E-05 2.4E-09 76.1 5.0 85 3-108 8-93 (310)
52 2uyt_A Rhamnulokinase; rhamnos 97.5 6.8E-05 2.3E-09 81.1 4.9 76 380-456 335-428 (489)
53 3vov_A Glucokinase, hexokinase 97.3 0.00031 1.1E-08 71.0 7.6 75 3-91 2-77 (302)
54 3epq_A Putative fructokinase; 97.3 0.00049 1.7E-08 69.6 8.8 58 2-77 3-60 (302)
55 2aa4_A Mannac kinase, putative 97.2 0.00083 2.8E-08 67.0 8.5 53 3-63 2-54 (289)
56 1woq_A Inorganic polyphosphate 97.1 0.0038 1.3E-07 61.6 12.5 77 3-91 13-92 (267)
57 4ehu_A Activator of 2-hydroxyi 97.0 0.0012 4E-08 65.6 8.2 63 2-78 1-65 (276)
58 1zbs_A Hypothetical protein PG 97.0 0.001 3.4E-08 66.7 7.7 66 3-76 1-66 (291)
59 2ap1_A Putative regulator prot 97.0 0.0026 8.9E-08 64.7 10.3 62 3-75 25-86 (327)
60 2gup_A ROK family protein; sug 97.0 0.0015 5.1E-08 65.3 8.3 69 3-91 5-74 (292)
61 3mcp_A Glucokinase; structural 96.9 0.0012 4.1E-08 68.6 7.2 73 2-91 9-86 (366)
62 2q2r_A Glucokinase 1, putative 96.7 0.0012 4.2E-08 68.6 4.9 76 1-91 28-107 (373)
63 3djc_A Type III pantothenate k 96.5 0.0038 1.3E-07 61.8 7.2 64 1-76 1-64 (266)
64 1zxo_A Conserved hypothetical 96.5 0.00058 2E-08 68.5 0.9 64 3-76 1-64 (291)
65 2yhx_A Hexokinase B; transfera 96.5 0.007 2.4E-07 64.5 9.3 55 3-62 62-119 (457)
66 1sz2_A Glucokinase, glucose ki 96.3 0.0051 1.8E-07 62.7 6.8 33 1-33 13-46 (332)
67 3lm2_A Putative kinase; struct 96.2 0.0041 1.4E-07 60.1 4.8 56 2-76 6-61 (226)
68 1saz_A Probable butyrate kinas 96.1 0.0036 1.2E-07 65.4 4.3 33 1-34 1-33 (381)
69 1bdg_A Hexokinase; phosphotran 95.8 0.027 9.3E-07 59.9 9.7 68 3-76 69-142 (451)
70 3h1q_A Ethanolamine utilizatio 95.5 0.051 1.7E-06 53.2 9.9 58 2-62 28-85 (272)
71 3bex_A Type III pantothenate k 95.5 0.024 8.3E-07 55.4 7.4 60 3-76 4-63 (249)
72 1cza_N Hexokinase type I; stru 95.4 0.028 9.4E-07 65.2 8.6 70 3-77 79-156 (917)
73 3zyy_X Iron-sulfur cluster bin 95.4 0.035 1.2E-06 61.1 8.8 75 3-77 207-297 (631)
74 3o8m_A Hexokinase; rnaseh-like 94.7 0.095 3.2E-06 56.1 9.5 71 3-76 81-155 (485)
75 2h3g_X Biosynthetic protein; p 94.2 0.11 3.6E-06 51.4 8.0 62 4-76 2-63 (268)
76 1cza_N Hexokinase type I; stru 93.7 0.11 3.8E-06 60.1 8.2 70 3-76 527-601 (917)
77 4ehu_A Activator of 2-hydroxyi 93.3 0.12 4.2E-06 50.7 6.7 60 495-563 180-239 (276)
78 4a2a_A Cell division protein F 92.6 0.41 1.4E-05 50.3 9.8 73 3-78 9-86 (419)
79 2ych_A Competence protein PILM 92.4 0.32 1.1E-05 49.9 8.6 56 504-561 280-337 (377)
80 3qbx_A Anhydro-N-acetylmuramic 90.8 0.39 1.3E-05 49.3 6.9 60 495-562 256-316 (371)
81 1vhx_A Putative holliday junct 90.4 0.39 1.3E-05 43.0 5.8 25 3-27 4-28 (150)
82 2ivn_A O-sialoglycoprotein end 90.4 0.85 2.9E-05 46.2 9.1 71 3-76 2-75 (330)
83 3f9m_A Glucokinase; hexokinase 89.1 0.64 2.2E-05 49.4 7.2 58 3-63 78-140 (470)
84 3hm8_A Hexokinase-3; glucose, 88.8 0.8 2.7E-05 48.3 7.6 56 3-62 60-115 (445)
85 3cqy_A Anhydro-N-acetylmuramic 88.6 0.61 2.1E-05 47.9 6.4 56 496-560 264-320 (370)
86 3h1q_A Ethanolamine utilizatio 88.1 0.24 8.3E-06 48.3 3.0 53 504-562 206-258 (272)
87 2ews_A Pantothenate kinase; PA 88.1 1.5 5.2E-05 43.5 8.8 65 493-563 205-273 (287)
88 3nuw_A 2-OXO-3-deoxygalactonat 87.7 0.57 1.9E-05 46.7 5.4 35 2-37 6-40 (295)
89 3cet_A Conserved archaeal prot 86.5 0.64 2.2E-05 47.0 5.0 31 4-35 2-32 (334)
90 4a2a_A Cell division protein F 86.3 0.76 2.6E-05 48.2 5.7 64 496-561 290-359 (419)
91 4b9q_A Chaperone protein DNAK; 86.0 0.57 1.9E-05 51.6 4.8 63 496-561 301-364 (605)
92 3qfu_A 78 kDa glucose-regulate 85.9 0.9 3.1E-05 46.6 6.0 64 496-561 311-375 (394)
93 3i33_A Heat shock-related 70 k 84.8 0.93 3.2E-05 46.8 5.5 63 496-561 319-383 (404)
94 2ych_A Competence protein PILM 84.4 1.6 5.5E-05 44.5 7.1 71 3-78 14-86 (377)
95 3t69_A Putative 2-dehydro-3-de 84.3 0.94 3.2E-05 45.8 5.0 32 3-34 8-39 (330)
96 1dkg_D Molecular chaperone DNA 83.5 1.2 4E-05 45.7 5.6 64 496-562 301-365 (383)
97 4gni_A Putative heat shock pro 83.4 0.93 3.2E-05 47.0 4.8 61 496-559 312-373 (409)
98 3eno_A Putative O-sialoglycopr 83.1 3.3 0.00011 41.9 8.6 60 496-562 221-284 (334)
99 2f9w_A Pantothenate kinase; CO 82.9 3.3 0.00011 40.6 8.2 42 495-542 202-244 (271)
100 2ivn_A O-sialoglycoprotein end 82.7 3.3 0.00011 41.7 8.5 60 496-562 216-279 (330)
101 4ijn_A Acetate kinase, acetoki 82.2 4.9 0.00017 41.5 9.4 68 1-75 22-92 (398)
102 3eno_A Putative O-sialoglycopr 81.4 3.5 0.00012 41.7 8.0 74 2-78 6-82 (334)
103 2i7n_A Pantothenate kinase 1; 80.9 2.4 8.3E-05 43.3 6.6 63 494-563 275-345 (360)
104 1t6c_A Exopolyphosphatase; alp 80.1 3.8 0.00013 41.1 7.7 69 3-75 13-90 (315)
105 3mdq_A Exopolyphosphatase; str 79.2 6 0.0002 39.6 8.9 73 2-75 4-82 (315)
106 2ews_A Pantothenate kinase; PA 78.8 1.5 5.2E-05 43.5 4.2 25 3-28 21-45 (287)
107 3ttc_A HYPF, transcriptional r 78.2 6.3 0.00021 43.6 9.2 63 494-562 569-632 (657)
108 3en9_A Glycoprotease, O-sialog 77.0 9.5 0.00032 41.1 10.3 75 2-78 6-81 (540)
109 1nbw_A Glycerol dehydratase re 75.9 2.2 7.4E-05 46.1 4.5 57 1-61 1-60 (607)
110 3r9p_A ACKA; ssgcid, seattle s 75.3 14 0.00046 38.1 10.2 70 3-75 13-83 (391)
111 1hux_A Activator of (R)-2-hydr 74.8 1.6 5.5E-05 42.7 3.1 105 318-451 127-238 (270)
112 1dkg_D Molecular chaperone DNA 74.4 1.1 3.8E-05 45.8 1.9 23 423-445 334-358 (383)
113 2v7y_A Chaperone protein DNAK; 74.3 2.6 8.8E-05 45.2 4.8 63 496-561 270-333 (509)
114 3cer_A Possible exopolyphospha 73.7 7.5 0.00026 39.4 7.9 70 2-75 16-95 (343)
115 3qfu_A 78 kDa glucose-regulate 72.1 1.9 6.4E-05 44.2 3.0 22 423-444 344-367 (394)
116 4ep4_A Crossover junction endo 70.5 16 0.00055 33.0 8.4 22 3-24 2-23 (166)
117 3d2f_A Heat shock protein homo 70.0 3.1 0.0001 46.4 4.3 63 496-561 302-365 (675)
118 4gni_A Putative heat shock pro 69.0 2.4 8.1E-05 43.9 2.9 23 423-445 345-369 (409)
119 1u6z_A Exopolyphosphatase; alp 68.6 9.6 0.00033 40.9 7.7 72 3-77 12-91 (513)
120 4b9q_A Chaperone protein DNAK; 67.3 2.8 9.5E-05 46.1 3.2 23 423-445 334-358 (605)
121 3vth_A Hydrogenase maturation 67.0 13 0.00046 41.7 8.6 61 495-562 664-728 (761)
122 3cj1_A Ectonucleoside triphosp 66.8 6.2 0.00021 41.7 5.6 60 2-62 34-99 (456)
123 3en9_A Glycoprotease, O-sialog 64.7 16 0.00053 39.4 8.4 60 496-562 220-283 (540)
124 4gib_A Beta-phosphoglucomutase 62.5 1.9 6.4E-05 41.1 0.5 23 5-27 9-39 (250)
125 2v7y_A Chaperone protein DNAK; 62.4 4.4 0.00015 43.4 3.5 23 423-445 303-327 (509)
126 1yuw_A Heat shock cognate 71 k 61.4 6.1 0.00021 42.8 4.5 63 496-561 298-362 (554)
127 1yuw_A Heat shock cognate 71 k 61.3 4.2 0.00015 44.1 3.2 23 423-445 331-355 (554)
128 2kho_A Heat shock protein 70; 61.0 3.7 0.00013 45.0 2.7 23 1-24 1-23 (605)
129 2a6a_A Hypothetical protein TM 60.8 19 0.00064 34.0 7.2 63 3-78 13-75 (218)
130 3qbx_A Anhydro-N-acetylmuramic 60.8 8.4 0.00029 39.4 5.0 74 1-76 1-94 (371)
131 3r6m_A YEAZ, resuscitation pro 60.8 9.2 0.00031 36.0 5.0 63 3-78 3-65 (213)
132 3i33_A Heat shock-related 70 k 60.5 4.1 0.00014 41.9 2.7 22 423-444 352-375 (404)
133 1hjr_A Holliday junction resol 59.8 28 0.00096 31.0 7.8 24 3-26 2-25 (158)
134 3aap_A Ectonucleoside triphosp 59.8 22 0.00075 36.1 8.0 20 2-21 3-22 (353)
135 3hi0_A Putative exopolyphospha 59.4 14 0.00049 39.5 6.8 71 2-76 15-94 (508)
136 1g99_A Acetate kinase; alpha/b 58.9 14 0.00047 38.3 6.3 128 408-553 183-346 (408)
137 3d2f_A Heat shock protein homo 58.6 3.8 0.00013 45.6 2.2 23 423-445 335-359 (675)
138 1iv0_A Hypothetical protein; r 58.4 19 0.00066 29.3 6.0 50 1-61 1-50 (98)
139 2gel_A Putative GRAM negative 57.5 11 0.00037 35.9 5.0 63 3-78 2-64 (231)
140 3khy_A Propionate kinase; csgi 57.4 13 0.00043 38.2 5.6 32 1-32 1-33 (384)
141 2d0o_A DIOL dehydratase-reacti 55.7 25 0.00087 37.8 7.7 73 486-560 503-579 (610)
142 1jce_A ROD shape-determining p 55.4 5.5 0.00019 39.9 2.6 64 496-562 242-309 (344)
143 3sk3_A Acetate kinase, acetoki 54.8 15 0.00053 38.1 5.8 45 506-552 316-362 (415)
144 1jce_A ROD shape-determining p 54.6 6.9 0.00024 39.2 3.2 22 1-23 2-23 (344)
145 2zgy_A Plasmid segregation pro 53.1 10 0.00036 37.5 4.3 30 531-562 273-305 (320)
146 3psf_A Transcription elongatio 52.8 28 0.00095 40.5 8.1 29 3-31 520-553 (1030)
147 3bzc_A TEX; helix-turn-helix, 51.1 45 0.0015 37.6 9.3 29 3-31 330-359 (785)
148 2kho_A Heat shock protein 70; 50.6 15 0.0005 40.3 5.2 31 531-561 334-364 (605)
149 4h0o_A Acetate kinase; askha ( 49.4 18 0.0006 37.3 5.2 31 1-32 13-43 (404)
150 3ven_A O-carbamoyltransferase 47.7 39 0.0013 36.7 7.8 60 495-561 278-339 (576)
151 3zx3_A Ectonucleoside triphosp 46.4 24 0.00081 37.2 5.8 58 2-62 34-99 (452)
152 4h0p_A Acetate kinase; askha ( 45.5 21 0.00071 37.2 5.0 32 1-32 5-37 (438)
153 2iir_A Acetate kinase; transfe 43.8 23 0.00079 36.6 5.1 32 2-33 1-33 (403)
154 3psi_A Transcription elongatio 43.2 37 0.0013 40.2 7.2 29 3-31 517-550 (1219)
155 4g9i_A Hydrogenase maturation 42.9 39 0.0013 38.0 7.2 61 494-561 675-739 (772)
156 4apw_A ALP12; actin-like prote 37.4 55 0.0019 32.5 6.8 55 504-563 254-309 (329)
157 3cqy_A Anhydro-N-acetylmuramic 36.3 1.1E+02 0.0038 31.1 8.7 72 3-76 6-98 (370)
158 2e1z_A Propionate kinase; TDCD 35.7 45 0.0015 34.5 5.8 32 2-33 18-50 (415)
159 2zgy_A Plasmid segregation pro 34.5 65 0.0022 31.6 6.7 23 4-26 2-24 (320)
160 1nu0_A Hypothetical protein YQ 32.9 41 0.0014 29.2 4.2 24 2-25 3-26 (138)
161 3khy_A Propionate kinase; csgi 31.9 78 0.0027 32.4 6.7 78 472-552 229-336 (384)
162 1g99_A Acetate kinase; alpha/b 31.5 52 0.0018 34.0 5.4 31 3-33 2-33 (408)
163 1xho_A Chorismate mutase; sout 28.9 57 0.002 28.5 4.3 35 44-78 43-79 (148)
164 2fsj_A Hypothetical protein TA 28.1 32 0.0011 34.6 3.1 23 3-27 22-44 (346)
165 1dbf_A Protein (chorismate mut 26.8 68 0.0023 27.4 4.4 35 44-78 14-50 (127)
166 3mdq_A Exopolyphosphatase; str 25.2 55 0.0019 32.4 4.2 30 4-34 133-162 (315)
167 2d0o_A DIOL dehydratase-reacti 24.9 1.6E+02 0.0055 31.7 7.8 57 1-61 1-61 (610)
168 1ufy_A Chorismate mutase; shik 24.8 88 0.003 26.5 4.6 35 44-78 13-50 (122)
169 1dw0_A Cytochrome C; asparagin 23.5 26 0.00088 29.4 1.1 33 139-172 78-111 (112)
170 1t6c_A Exopolyphosphatase; alp 22.0 87 0.003 31.0 5.0 73 3-78 139-215 (315)
171 2e1z_A Propionate kinase; TDCD 21.9 73 0.0025 33.0 4.4 46 506-553 308-354 (415)
No 1
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=3.8e-86 Score=733.15 Aligned_cols=467 Identities=50% Similarity=0.887 Sum_probs=408.0
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q 78 (564)
|+|+||||+||||+|++|||.+|+++++.++++++.+|++||+||||++||+++++++++++. ++.+.+|.+||||+|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDAT 83 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEcCC
Confidence 569999999999999999999999999999999999999999999999999999999999983 455678999999999
Q ss_pred CceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhchhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHhhhc
Q psy10531 79 CSLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINATKHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWRRAG 158 (564)
Q Consensus 79 ~s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~~~~ 158 (564)
+++|+||++|+||...+.+.+.+|+|+|+|+|+.++++++++..++++++||+++++.++++||+|+++|+ |++|+|++
T Consensus 84 ~~~v~~D~~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~Kl~Wl~~~~-Pe~~~~~~ 162 (554)
T 3l0q_A 84 CSLVVLDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHM-PNTWSNVG 162 (554)
T ss_dssp SCEEEEETTSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHTCGGGGGBTTCCCTTSHHHHHHHHHHHC-HHHHHHEE
T ss_pred CceEEECCCCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhHHHHHHHhCCCCChhhHHHHHHHHHHhC-hHHHHHhc
Confidence 99999999999996666667778999999999999999998766678999999999999999999999999 99999999
Q ss_pred cccchhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCC-CCHHHHH
Q psy10531 159 LFFDLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHG-VSTEVAR 237 (564)
Q Consensus 159 ~~l~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~-v~~~~a~ 237 (564)
+|++++|||.|+|||+...+.++.+++++||.++++||+++|+.+||++..+..+++|||+++++++++| . |++++|+
T Consensus 163 ~~~~~~dyl~~~LTG~~~~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~i~~~~~~~G-~~lt~~~A~ 241 (554)
T 3l0q_A 163 HLFDLPDFLTWRATKDETRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLG-HGLSQRAAS 241 (554)
T ss_dssp EEEEHHHHHHHHHHSCCCEEHHHHHHHSCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSCEECTTCBCT-TSSCHHHHH
T ss_pred eEEcHHHHHHHHHhCCccccccchhhccccccccCCCCHHHHHHcCCccccchhHHhCCCcccCCcCeeC-cccCHHHHH
Confidence 9999999999999999987877877767799999999999999999985210000157767999999999 4 9999999
Q ss_pred HcCCCCCCcEEeccchhHhhHhhh-hcc-CCCCCCCcCCCcEEEEEccchhhhcccCCCccCCCceecccccccCCeeEe
Q psy10531 238 ALGLNPGTPVSVSMIDAHAGALAL-LAT-SAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPGVWGPYYEVILPNTHLL 315 (564)
Q Consensus 238 ~~Gl~~g~pV~~g~~D~~aaa~g~-g~~-~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 315 (564)
++||++|+||++|++|++|+++|+ |+. . ||+.++.++.+++++|||+++.+++++|..+++.+.+++++..++.|.+
T Consensus 242 ~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~-~G~~~~~~~~~~~~~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (554)
T 3l0q_A 242 EMGLIPGTAVSVSIIDAHAGTIGILGASGV-TGENANFDRRIALIGGTSTAHMAMSRSAHFISGIWGPYYSAILPEYWLN 320 (554)
T ss_dssp HHTCCTTCEEBCCEEHHHHHHHHHTTCCCT-TSCCCCTTTEEEEECSSSEEEEEEESSCCCCTTSEEEEETSSSTTCEEE
T ss_pred HhCCCCCCeEEEeChHHHhHHhhccccccC-CCccccccceEEEEecchheeeeecCCccccCCcceeecccccCCceEe
Confidence 999999999999999999999997 655 5 7741111124889999999999999999888888876677777999999
Q ss_pred ccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccceec
Q psy10531 316 ESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMICG 395 (564)
Q Consensus 316 ~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 395 (564)
+++++++|.+++|+++.+...+++.+.++..+ .+.|+.|++++++.+ ++
T Consensus 321 ~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~-~~~~~~l~~~~~~~~-----~~------------------------- 369 (554)
T 3l0q_A 321 EGGQSATGALIDHIIQSHPCYPALLEQAKNKG-ETIYEALNYILRQMA-----GE------------------------- 369 (554)
T ss_dssp EEEESCSHHHHHHHHHTSTTHHHHHHHHHHTT-CCHHHHHHHHHHHHH-----SS-------------------------
T ss_pred cchhhhhHHHHHHHHHhcccchHHHHHHHhcC-CCHHHHHHHHHHhcC-----CC-------------------------
Confidence 99999999999999998765455545454444 568999988887664 11
Q ss_pred cCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEeecccCC
Q psy10531 396 LTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWPDFHGN 475 (564)
Q Consensus 396 ~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~ 475 (564)
......+++|++|+|||+|+
T Consensus 370 ------------------------------------------------------------~~~~~~~~~gl~flP~~~Ge 389 (554)
T 3l0q_A 370 ------------------------------------------------------------PENIAFLTNDIHMLPYFHGN 389 (554)
T ss_dssp ------------------------------------------------------------GGGGGGGGTTCCEECCTTCB
T ss_pred ------------------------------------------------------------CCccccccCceEEcccccCC
Confidence 00001137899999999999
Q ss_pred CCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcC
Q psy10531 476 RSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTG 555 (564)
Q Consensus 476 r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g 555 (564)
|+|+|||++||+|+||+.+|+++|++|+|||++||+||++|+++|.|++.|.+ +++|+++||++||++|+||+|||||
T Consensus 390 r~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~--~~~i~~~GG~aks~~~~Qi~ADv~g 467 (554)
T 3l0q_A 390 RSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYN--IDTMMASGGGTKNPIFVQEHANATG 467 (554)
T ss_dssp CSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--CCEEEEESGGGGCHHHHHHHHHHHC
T ss_pred CCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCEEEEeCccccCHHHHHHHHHhhC
Confidence 99999999999999999999999998889999999999999999999988888 8999999999999999999999999
Q ss_pred CeeeccCC
Q psy10531 556 CNVLCPQE 563 (564)
Q Consensus 556 ~~v~~~~~ 563 (564)
+||++++.
T Consensus 468 ~pV~~~~~ 475 (554)
T 3l0q_A 468 CAMLLPEE 475 (554)
T ss_dssp CEEEEESC
T ss_pred CeEEecCC
Confidence 99998753
No 2
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=5.5e-85 Score=716.40 Aligned_cols=422 Identities=22% Similarity=0.274 Sum_probs=383.7
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q 78 (564)
|+|+||||+|||++|++|+|.+|+++++.+++++..+|++||+||||++||+++++++++++ .++++.+|.+|||++|
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~~ 85 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGICVTGM 85 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEEEC
T ss_pred CCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChhheEEEEEECC
Confidence 46999999999999999999999999999999999999999999999999999999999997 3455679999999998
Q ss_pred -CceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHh
Q psy10531 79 -CSLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWR 155 (564)
Q Consensus 79 -~s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~ 155 (564)
+++|+||++|+|+ +|+|+|+|+|+.++++++++. .++++++||+++++.++++||+|+++|+ ||+|+
T Consensus 86 ~~~~v~~D~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~~~~ 155 (508)
T 3ifr_A 86 LPAVVLLDDRGAVL---------RPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHE-PAVFG 155 (508)
T ss_dssp SSCBEEECTTSCBC---------SCEECTTCCCCHHHHHHHHHHSCHHHHHHHHSSCSSTTSHHHHHHHHHHHC-HHHHH
T ss_pred CCcEEEECCCCCCc---------ccceeccccChHHHHHHHHhhccHHHHHHHHCCCCChhhHHHHHHHHHHcC-HHHHH
Confidence 8999999999999 999999999999999999876 4679999999999999999999999999 99999
Q ss_pred hhccccchhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCCHHH
Q psy10531 156 RAGLFFDLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVSTEV 235 (564)
Q Consensus 156 ~~~~~l~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~ 235 (564)
|+++|++++|||.|+|||+.++|.++++.+++||+++++||+++|+.+||+.. +|| +++++++++| ++++++
T Consensus 156 ~~~~~l~~~dyl~~~LTG~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~LP-~i~~~~~~~G-~l~~~~ 227 (508)
T 3ifr_A 156 AIATVCGSYDYINMLLTGERVVDRNWALEGGFIDLASGTVEADLVALAHIPPS------AVP-PAHPTHRVLG-AVTAEA 227 (508)
T ss_dssp TCSEEECHHHHHHHHHHCCCCEEHHHHHHHTCEETTTTEECHHHHHTTTSCGG------GSC-CEECTTSEEE-ECCHHH
T ss_pred HHhhhcCchHHHHHHhcCCccccHhHhhcccCccCccCCCCHHHHHHcCCCHH------HCC-CCcCCCCeee-ccCHHH
Confidence 99999999999999999999988888888889999999999999999999973 565 7999999999 999999
Q ss_pred HHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccCCCccCCCceecccccccCCeeEe
Q psy10531 236 ARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPGVWGPYYEVILPNTHLL 315 (564)
Q Consensus 236 a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 315 (564)
|+++||++|+||++|++|++|+++|+|++. ||+ +++++|||+++.+++++|+.++..+ .+++..++.|..
T Consensus 228 a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~ 297 (508)
T 3ifr_A 228 AALTGLPTGLPVYGGAADHIASALAAGITR-PGD-------VLLKFGGAGDIIVASATAKSDPRLY--LDYHLVPGLYAP 297 (508)
T ss_dssp HHHHCCCTTCEEECCEEHHHHHHHHTTCCS-TTE-------EEEEESSSEEEEECBSCCCCBTTBB--CCBCSSTTCBCC
T ss_pred HHHhCCCCCCeEEEECchHHHHHHhCCCCC-CCc-------EEEEechhhhheeeCCCcccCCCcc--eeeeecCCceEE
Confidence 999999999999999999999999999998 888 9999999999999999988777733 355667899999
Q ss_pred ccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccceec
Q psy10531 316 ESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMICG 395 (564)
Q Consensus 316 ~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 395 (564)
+++++++|.+++|+++.+.. .+....|++|++++++.+
T Consensus 298 ~g~~~~~G~~~~W~~~~~~~----------~~~~~~~~~l~~~a~~~~-------------------------------- 335 (508)
T 3ifr_A 298 NGCMAATGSALNWLAKLLAP----------EAGEAAHAQLDALAAEVP-------------------------------- 335 (508)
T ss_dssp EEEESSSHHHHHHHHHHHST----------TCTTHHHHHHHHHHHTSC--------------------------------
T ss_pred echhhhhHHHHHHHHHHHhh----------cCCCCCHHHHHHHHhcCC--------------------------------
Confidence 99999999999999987631 110125888888776543
Q ss_pred cCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEeecccCC
Q psy10531 396 LTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWPDFHGN 475 (564)
Q Consensus 396 ~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~ 475 (564)
++++|++|+|||+|+
T Consensus 336 -----------------------------------------------------------------~~~~gl~flP~~~Ge 350 (508)
T 3ifr_A 336 -----------------------------------------------------------------AGADGLVCLPYFLGE 350 (508)
T ss_dssp -----------------------------------------------------------------TTGGGCEEECCTTCC
T ss_pred -----------------------------------------------------------------CCCCCeEEecCCCCC
Confidence 147899999999999
Q ss_pred CCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcC
Q psy10531 476 RSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTG 555 (564)
Q Consensus 476 r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g 555 (564)
|+|+||+++||+|+|++..|+++|+ +||++||+||.+|++++.|++.|.+ +++|+++||++||++|+||+||++|
T Consensus 351 r~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~g~~--~~~i~~~GGga~s~~~~Qi~ADv~g 425 (508)
T 3ifr_A 351 KTPIHDPFASGTFTGLSLSHTRGHL---WRALLEAVALAFRHHVAVLDDIGHA--PQRFFASDGGTRSRVWMGIMADVLQ 425 (508)
T ss_dssp C----CCCCCCEEESCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHTCC--CCEEEEESGGGGCHHHHHHHHHHHT
T ss_pred CCCCCCCCcCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHhcCCC--CCEEEEeCCcccCHHHHHHHHHHhC
Confidence 9999999999999999999999999 9999999999999999999988888 8999999999999999999999999
Q ss_pred CeeeccC
Q psy10531 556 CNVLCPQ 562 (564)
Q Consensus 556 ~~v~~~~ 562 (564)
+||.+++
T Consensus 426 ~pV~~~~ 432 (508)
T 3ifr_A 426 RPVQLLA 432 (508)
T ss_dssp SCEEEEE
T ss_pred CeEEecC
Confidence 9999875
No 3
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=1.7e-84 Score=711.92 Aligned_cols=420 Identities=18% Similarity=0.282 Sum_probs=378.4
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC-C
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT-C 79 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q-~ 79 (564)
|+|+||||+||||+|++++|.+|+++++.+++++.++|++||+||||++||+++++++++++.... .+|.+||||+| +
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~-~~I~~Igis~q~~ 81 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-GKIAAISWSSQMH 81 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS-SEEEEEEEEECSS
T ss_pred CCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC-CCeEEEEEECCCC
Confidence 469999999999999999999999999999999999999999999999999999999999985433 68999999998 9
Q ss_pred ceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHhhh
Q psy10531 80 SLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWRRA 157 (564)
Q Consensus 80 s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~~~ 157 (564)
++|+||++|+|| +|+|+|+|+|+.++++++.+. .++++++||+++++.++++||+|+++|+ ||+|+|+
T Consensus 82 ~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-pe~~~~~ 151 (504)
T 3ll3_A 82 SLIGLGSDDELL---------TNSITWADNCAKSIVQDAKNRGFAQQIYRKTGMPMHPMAPIYKLLWLKNKK-TEVFSQA 151 (504)
T ss_dssp CBEEECTTSCBS---------SCEECTTCCTTHHHHHHHHHHTHHHHHHHHHCCCSCTTSHHHHHHHHHHHC-HHHHHHC
T ss_pred cEEEECCCCCCc---------ccceeCCccCHHHHHHHHHhccCHHHHHHHHCCCCCcccHHHHHHHHHHcC-hHHHHHH
Confidence 999999999999 999999999999999999875 4679999999999999999999999999 9999999
Q ss_pred ccccchhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCCHHHHH
Q psy10531 158 GLFFDLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVSTEVAR 237 (564)
Q Consensus 158 ~~~l~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~a~ 237 (564)
++|++++|||.|+|||+.++|.++++.+++||+++++||+++|+.+||+.. .|| +++++++++| ++++++|+
T Consensus 152 ~~~~~~~dyl~~~LTG~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~LP-~i~~~~~~~G-~l~~~~a~ 223 (504)
T 3ll3_A 152 QKWIGIKEYIIFRLTGKLVTDTTMAAGTGILNLKTLTWDQELLDILKIKKE------QLP-KIAQPTKVIF-PIKTEYVK 223 (504)
T ss_dssp CEEECHHHHHHHHHHSCCEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCCGG------GSC-EEECTTCEEC-CCCHHHHH
T ss_pred hheeCHHHHHHHHHhCCcccchhHhhcccCeeCCCCCcCHHHHHHcCCCHH------HCC-CeeCCcceee-ccCHHHHH
Confidence 999999999999999999988888888889999999999999999999973 565 8999999999 99999999
Q ss_pred HcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccCCCccCCCceecccccccCCeeEecc
Q psy10531 238 ALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPGVWGPYYEVILPNTHLLES 317 (564)
Q Consensus 238 ~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 317 (564)
++||++|+||++|++|++|+++|+|++. ||+ +++++|||+++.+++++|..++.....++. ..++.|..++
T Consensus 224 ~~Gl~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 294 (504)
T 3ll3_A 224 KLGIDSDTKIILGASDGYLSTIGVNAID-SDH-------CALNVGTSGAIRTIVDQPKIDPSASYFCYP-ADKTHYLLGG 294 (504)
T ss_dssp HHTCCTTCEEEEEEEHHHHHHHTTTCCS-TTE-------EEEEESSSEEEEEEESSCCCCTTCCSEEEE-EETTEEEEEE
T ss_pred hcCCCcCCCEEEEccHHHHHHHhCCCCC-CCc-------EEEEechhhhheeeCCCcccCCCCceEEEE-eCCCeEEEEe
Confidence 9999999999999999999999999998 888 999999999999999998877643221221 2367899999
Q ss_pred ccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccceeccC
Q psy10531 318 GQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMICGLT 397 (564)
Q Consensus 318 ~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 397 (564)
+++++|.+++|+++.+... ...++.+.+++++++
T Consensus 295 ~~~~~G~~~~W~~~~~~~~------------~~~~~~~~~~a~~~~---------------------------------- 328 (504)
T 3ll3_A 295 PVNNGGIVFNWARQTLFDA------------DETPQDFLDVAQTAP---------------------------------- 328 (504)
T ss_dssp EESCSHHHHHHHHHHHTCT------------TCCHHHHHHHHHTSC----------------------------------
T ss_pred ehhhHHHHHHHHHHHhccc------------hhHHHHHHHHHhcCC----------------------------------
Confidence 9999999999999876420 011222222333322
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEeecccCCCC
Q psy10531 398 LDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWPDFHGNRS 477 (564)
Q Consensus 398 ~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~r~ 477 (564)
++++|++|+|||+|+|+
T Consensus 329 ---------------------------------------------------------------~g~~gl~~~P~~~Ger~ 345 (504)
T 3ll3_A 329 ---------------------------------------------------------------AGSRNLIFLPYLGGERA 345 (504)
T ss_dssp ---------------------------------------------------------------TTGGGCEEECCTTCBCT
T ss_pred ---------------------------------------------------------------CCCCCeEEecCccCCCC
Confidence 24789999999999999
Q ss_pred CCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCe
Q psy10531 478 PLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTGCN 557 (564)
Q Consensus 478 P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~ 557 (564)
|+||+++||+|+|++..|+++|+ +||++||+||.+|++++.|++.+.+ +++|+++||++||++|+||+||++|+|
T Consensus 346 P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~--~~~i~~~GGga~s~~~~Qi~ADv~g~p 420 (504)
T 3ll3_A 346 PIWDANARGSFVGLTRMHQKPEM---ARAVIEGIIFNLYDAASNLIKNTKK--PVAINATGGFLKSDFVRQLCANIFNVP 420 (504)
T ss_dssp TTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHTTSCC--CSEEEEESGGGCSHHHHHHHHHHHTSC
T ss_pred CCCCCccCeEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCC--CCEEEEeCchhcCHHHHHHHHHhhCCe
Confidence 99999999999999999999999 9999999999999999999988877 899999999999999999999999999
Q ss_pred eeccC
Q psy10531 558 VLCPQ 562 (564)
Q Consensus 558 v~~~~ 562 (564)
|.+++
T Consensus 421 V~~~~ 425 (504)
T 3ll3_A 421 IVTMK 425 (504)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 99875
No 4
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=2.4e-84 Score=711.82 Aligned_cols=424 Identities=21% Similarity=0.293 Sum_probs=383.4
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH-hcCCCCCeEEEEEeCC-
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT-KDVNPAQIKGVGVDAT- 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~-~~~~~~~I~aIgis~q- 78 (564)
|+|+||||+||||+|++++|.+|+++++.+++++.++|++||+||||++||+++++++++++ .++++.+|.+|||++|
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~I~~Igis~q~ 83 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWWQSGVDARRVSAIVLSGQM 83 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEECC
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHHhcCCChhHeEEEEEeccc
Confidence 56999999999999999999999999999999999999999999999999999999999998 3334578999999998
Q ss_pred CceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHhh
Q psy10531 79 CSLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWRR 156 (564)
Q Consensus 79 ~s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~~ 156 (564)
+++|+||++|+|| +|+|+|+|+|+.++++++++. .++++++||+++++.++++||+|+++|+ ||+|+|
T Consensus 84 ~~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~~~~~ 153 (511)
T 3hz6_A 84 QNFLPLDQDHEPL---------HRAVLYSDKRPLKEAEEINARHGADNLWSALENPMTAASILPKLVFWRASF-PQAFGR 153 (511)
T ss_dssp SCBEEECTTSCBS---------SCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCSTTSHHHHHHHHHHHC-HHHHTT
T ss_pred ccEEEECCCcCCC---------cCceecCCCCHHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhC-hHHHHH
Confidence 9999999999999 999999999999999999876 3679999999999999999999999999 999999
Q ss_pred hccccc-hhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCCHHH
Q psy10531 157 AGLFFD-LPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVSTEV 235 (564)
Q Consensus 157 ~~~~l~-~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~ 235 (564)
+++|++ ++|||.|+|||+.++|.++++.+++||+++++||+++|+.+||++. .|| +++++++++| ++++++
T Consensus 154 ~~~~l~~~~dyl~~~LTG~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~LP-~i~~~~~~~G-~l~~~~ 225 (511)
T 3hz6_A 154 LRHVVLGAKDYVVLRLTGRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLD------LMP-RLLEPGEQVG-GVSALA 225 (511)
T ss_dssp CCEEECSHHHHHHHHHHSCCEECHHHHHHTTCEETTTTEECHHHHHHTTCCGG------GSC-EECCTTSEEE-ECCHHH
T ss_pred HHHHhcCcHHHHHHHHhCCceeeHhHhhcccceeCCCCCcCHHHHHHhCCCHH------HCC-CCcCCCCccc-ccCHHH
Confidence 999999 9999999999999888888888889999999999999999999973 565 8999999999 999999
Q ss_pred HHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccC-CCccC-CCceecccccccCCee
Q psy10531 236 ARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSA-KKVQV-PGVWGPYYEVILPNTH 313 (564)
Q Consensus 236 a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~-~p~~~-~~~~~~~~~~~~~~~~ 313 (564)
|+++||++|+||++|++|++|+++|+|++. +|+ +++++|||+++.++++ +|+.+ +......+++..++.|
T Consensus 226 a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (511)
T 3hz6_A 226 ARQTGFVSGTPVLCGLGDAGAATLGVGVLD-DED-------AYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKT 297 (511)
T ss_dssp HHHHCCCTTCEEECCEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEE
T ss_pred HHhhCCCCCCeEEEECchHHHHHHhCCCCC-CCc-------EEEEecchhhheeecCCeecccCCCCceEEEEEecCCce
Confidence 999999999999999999999999999998 898 9999999999999999 88877 6543333556668887
Q ss_pred EeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccce
Q psy10531 314 LLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMI 393 (564)
Q Consensus 314 ~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 393 (564)
...++++++|.+++|+++.+.. . . ...|++|++++++.+ ++
T Consensus 298 ~~~g~~~~~G~~~~W~~~~~~~---------~-~-~~~~~~l~~~a~~~~-----~g----------------------- 338 (511)
T 3hz6_A 298 LQVAPVLNAGNILQWALTLVGH---------R-P-GEDCAEYFHMAAAEV-----QG----------------------- 338 (511)
T ss_dssp EEEEEESSSHHHHHHHGGGGTC---------C-T-TSCSHHHHHHHHHHH-----TT-----------------------
T ss_pred EEEeehhhHHHHHHHHHHHhcc---------c-c-cccHHHHHHHHHhCC-----CC-----------------------
Confidence 7779999999999999998641 0 0 235788888877654 10
Q ss_pred eccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEeeccc
Q psy10531 394 CGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWPDFH 473 (564)
Q Consensus 394 ~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~ 473 (564)
...++|++|+|||+
T Consensus 339 ------------------------------------------------------------------~~~~~gl~~~P~~~ 352 (511)
T 3hz6_A 339 ------------------------------------------------------------------VTVPDGLLFVPYLH 352 (511)
T ss_dssp ------------------------------------------------------------------CCCCTTCEEEEESS
T ss_pred ------------------------------------------------------------------CCCCCCEEEeCCCC
Confidence 00168999999999
Q ss_pred CCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhh
Q psy10531 474 GNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADV 553 (564)
Q Consensus 474 G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv 553 (564)
|+|+|+||+++||+|+|++..|+++|+ +||++||+||.+|++++.|++ |. +++|+++||++||++|+||+||+
T Consensus 353 Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~~~~~~~l~~-g~---~~~i~~~GGga~s~~~~Qi~ADv 425 (511)
T 3hz6_A 353 AERCPVELPAPRGALLGVTGATTRAQI---LLAVLEGAALSLRWCAELLGM-EK---VGLLKVVGGGARSEAWLRMIADN 425 (511)
T ss_dssp CBCSSSCBSSCEEEEECCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHTG-GG---CCEEEEESGGGGCHHHHHHHHHH
T ss_pred CCCCCCCCCccceEEEcCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHhc-CC---CCEEEEeCchhcCHHHHHHHHHH
Confidence 999999999999999999999999999 999999999999999999988 53 57999999999999999999999
Q ss_pred cCCee-eccC
Q psy10531 554 TGCNV-LCPQ 562 (564)
Q Consensus 554 ~g~~v-~~~~ 562 (564)
+|+|| ++++
T Consensus 426 ~g~pV~~~~~ 435 (511)
T 3hz6_A 426 LNVSLLVKPD 435 (511)
T ss_dssp HTCEEEECCC
T ss_pred HCCeeEEecC
Confidence 99999 8864
No 5
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=3.4e-83 Score=711.72 Aligned_cols=433 Identities=30% Similarity=0.481 Sum_probs=387.4
Q ss_pred CcEEEEEEeCccceEEEEEeC-CCCEEEEEEeecc-----ccCCC------CCccccCHHHHHHHHHHHHHHHHh--cCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVST-RGKVSPIAVRPIA-----LWCPK------PQLYEQSSEDIWNSVCLAIRDVTK--DVN 66 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~~-----~~~~~------~g~~eqd~~~~~~~i~~~l~~l~~--~~~ 66 (564)
|+|+||||+||||+|++|+|. +|+++++.+++++ +.+|+ +||+||||++||+++++++++++. +++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~~~ 83 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESGVD 83 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC---C
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCC
Confidence 369999999999999999998 9999999999998 67787 999999999999999999999983 456
Q ss_pred CCCeEEEEEeCC-CceEEEcCCCCccccCCCCCCCCC-----------cccccCcchHHHHHHHHhc----hhHHHHHhC
Q psy10531 67 PAQIKGVGVDAT-CSLVALDTNHQPLTISPTGDDSRN-----------VLLWMDHRAVSEADQINAT----KHSVLDTVG 130 (564)
Q Consensus 67 ~~~I~aIgis~q-~s~v~~D~~G~pl~~~~~~~~~~p-----------~i~W~D~Ra~~~~~~l~~~----~~~i~~~tG 130 (564)
+.+|.+|||++| +++|+||++|+|| +| +|+|+|+|+.++++++++. .++++++||
T Consensus 84 ~~~I~~Igis~q~~~~v~~D~~G~pl---------~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG 154 (572)
T 3jvp_A 84 ADDVIGIGVDFTACTMLPVDEEGQPL---------CLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYG 154 (572)
T ss_dssp CSCEEEEEEEECSSCEEEECTTSCBG---------GGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGT
T ss_pred hhHEEEEEEecCCCcEEEECCCCCCC---------ccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhC
Confidence 679999999998 9999999999999 66 8999999999999999874 346889999
Q ss_pred CCCCCcChHHHHHHHHHhCChhHHhhhccccchhhHHHHhhhCCccccccccccccccccccCCC-CHHHHHHcCC----
Q psy10531 131 GKISPEMETPKLLWLKKNLPDTCWRRAGLFFDLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRW-NEDYFEKIGL---- 205 (564)
Q Consensus 131 ~~~~~~~~~~kl~Wl~~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W-~~ell~~~gi---- 205 (564)
+++++.++++||+|+++|+ ||+|+|+++|++++|||.|+|||+.+++.++++.+++|| ++++| |+++|+.+|+
T Consensus 155 ~~~~~~~~~~kl~wl~~~~-Pe~~~~~~~~l~~~dyl~~~LTG~~~~d~s~As~t~l~d-~~~~W~~~ell~~~g~~l~~ 232 (572)
T 3jvp_A 155 GKISSEWMIAKVWQILDEA-EDVYNRTDQFLEATDWIVSQMTGKIVKNSCTAGYKAIWH-KREGYPSNEFFKALDPRLEH 232 (572)
T ss_dssp TCCCSSSHHHHHHHHHHHH-HHHHHHCSEEEEHHHHHHHHHHSSCCEEHHHHHHHSCCB-TTTBSCCHHHHHTTCGGGTT
T ss_pred CCCCchhHHHHHHHHHHhC-HHHHHHhheEecHHHHHHHHhcCCceeehhhccccceeC-CCCCcCCHHHHHHhCccccc
Confidence 9999999999999999999 999999999999999999999999998888888888999 99999 9999999984
Q ss_pred -CccccccccccCCcccCCCcccCCCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccc
Q psy10531 206 -GDLKQNGWRAIGNTVKNPGQPIGHGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTS 284 (564)
Q Consensus 206 -~~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs 284 (564)
++. +|||+|+++++++| +|++++|+++||++|+||++|++|++|+++|+|++. ||+ +++++|||
T Consensus 233 i~~~------~L~p~i~~~~~~~G-~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~~~GTs 297 (572)
T 3jvp_A 233 LTTT------KLRGDIVPLGERAG-GLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTT-PGK-------LVMAMGTS 297 (572)
T ss_dssp STTT------TTCSCEECTTSEEE-ECCHHHHHHHTSCTTCEEECCEETTTTHHHHTTCCS-SEE-------EEEEESSS
T ss_pred CCHh------HCCCccCCcCcccc-ccCHHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCC-CCc-------EEEEecch
Confidence 332 68678999999999 999999999999999999999999999999999998 888 99999999
Q ss_pred hhhhcccCCCccCCCceecccccccCCeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhccc
Q psy10531 285 TCHMALSAKKVQVPGVWGPYYEVILPNTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHS 364 (564)
Q Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 364 (564)
+++..+++++...++.+..+..+..++.|.++++++++|.+++||++++. .+++.+.++..| .+.|++|++++++.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~-~~~~~~~~~~~g-~~~~~~l~~~a~~~~- 374 (572)
T 3jvp_A 298 ICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGV-SAATFDEAQEKG-VNVHALLEEKASQLR- 374 (572)
T ss_dssp EEEEEEESSCCCCTTCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTS-BHHHHHHHHHTT-BCHHHHHHHHHTSSC-
T ss_pred hheeeecCCCccCCCceeeccCccCCCcEEEeehhhhHHHHHHHHHHhcc-chhhHHHHHhcC-CCHHHHHHHHHHhCC-
Confidence 99888888776666554433344568999999999999999999999986 344444454445 456888888876543
Q ss_pred CCCCCceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhc
Q psy10531 365 TELTADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDT 444 (564)
Q Consensus 365 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~ 444 (564)
T Consensus 375 -------------------------------------------------------------------------------- 374 (572)
T 3jvp_A 375 -------------------------------------------------------------------------------- 374 (572)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcceeeCCCCCCcccccCcceEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10531 445 NHQPLTISPTDTRHSTELTADFHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHA 524 (564)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~ 524 (564)
++++|++|+|||.|+|+|+|||++||+|+|++..|+++|+ +||++||+||++|++++.|++
T Consensus 375 ----------------~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~l---~RAvlEgia~~~r~~~~~l~~ 435 (572)
T 3jvp_A 375 ----------------PGESGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEEI---YRALLEATAFGTRAIVDAFHG 435 (572)
T ss_dssp ----------------TTSSCCEEECCTTCCCTTTCCSSCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------CCCCCeEeCCccCCCCCCCCCCCcCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 2478999999999999999999999999999999999999 999999999999999999998
Q ss_pred cCCCCCCCEEEEEcCCc-ccHHHHHHHhhhcCCeeeccCC
Q psy10531 525 AGKTPAISTLLVSGGLA-KNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 525 ~g~~~~~~~i~~~GG~a-~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
.|.+ +++|+++||++ ||++|+||+|||+|+||.+++.
T Consensus 436 ~g~~--~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~ 473 (572)
T 3jvp_A 436 RGVE--VHELYACGGLPQKNHLLMQIFADVTNREIKVAAS 473 (572)
T ss_dssp TTCC--EEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCC
T ss_pred cCCC--cCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCC
Confidence 8887 89999999999 9999999999999999998753
No 6
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=7.1e-81 Score=680.74 Aligned_cols=418 Identities=22% Similarity=0.335 Sum_probs=370.1
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC-Cce
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT-CSL 81 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q-~s~ 81 (564)
|+||||+|||++|++++|.+|++++..++++++++|++||+|||+++||+++++++++++......+|.+|||++| +++
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~i~~Igis~~~~~~ 80 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGA 80 (484)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCB
T ss_pred CEEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCCccceEEEEEcCCcCcE
Confidence 4799999999999999999999999999999999999999999999999999999999985444568999999998 899
Q ss_pred EEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhchhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHhhhcccc
Q psy10531 82 VALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINATKHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWRRAGLFF 161 (564)
Q Consensus 82 v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~~~~~~l 161 (564)
|+||++|+|+ +|+|+|+|.|+.++++++.+....++++||+++++.++++||+|+++|+ |++|+|+++++
T Consensus 81 v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-P~~~~~~~~~l 150 (484)
T 2itm_A 81 TLLDAQQRVL---------RPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHE-PEIFRQIDKVL 150 (484)
T ss_dssp EEECTTCCBC---------SCEECTTCCTTHHHHHHHHHHCTTHHHHHSSCCCTTSHHHHHHHHHHHC-HHHHTTCCEEE
T ss_pred EEECCCcCCC---------cccceecccCcHHHHHHHHHhHHHHHHHhCCCCCcccHHHHHHHHHHhC-hHHHHHHhhee
Confidence 9999999999 9999999999999999998754457788999999999999999999999 99999999999
Q ss_pred chhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCCHHHHHHcCC
Q psy10531 162 DLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVSTEVARALGL 241 (564)
Q Consensus 162 ~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~a~~~Gl 241 (564)
+++|||.|+|||+.+++.++++.+++||+++++||+++|+.+||++. .| |+|+++++++| ++++++|+++||
T Consensus 151 ~~~d~l~~~LTG~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~l-p~i~~~~~~~G-~~~~~~a~~~Gl 222 (484)
T 2itm_A 151 LPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRD------QM-PALYEGSEITG-ALLPEVAKAWGM 222 (484)
T ss_dssp CHHHHHHHHHHSCCEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGG------GS-CEEECTTSEEE-ECCHHHHHHHTS
T ss_pred CcHHHHHHHHhCCceeeHHHhhccccccCCCCCcCHHHHHHcCCCHH------HC-CCccCCcceee-ccCHHHHHHhCC
Confidence 99999999999999888888888889999999999999999999973 45 48999999999 999999999999
Q ss_pred CCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccCCCccCCCceecccccccCCeeEeccccCc
Q psy10531 242 NPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPGVWGPYYEVILPNTHLLESGQSA 321 (564)
Q Consensus 242 ~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (564)
+ |+||++|++|++|+++|+|++. +|+ +++++|||+++..++++|..++......+.+..++.|..++++.+
T Consensus 223 ~-g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (484)
T 2itm_A 223 A-TVPVVAGGGDNAAGAVGVGMVD-ANQ-------AMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLS 293 (484)
T ss_dssp C-CCEEECCEEHHHHHHHHHTCCS-TTC-------EEEEESSSEEEEEECSSCCCCCSSSCEEEECSSTTCEEEEEEECC
T ss_pred C-CCeEEEEchHHHHHHHhCCCCC-CCc-------EEEEccchheeEEecCCCccCcccceEEeecccCCeeeeeehhhh
Confidence 9 9999999999999999999998 888 999999999999988887665532212244456889999999999
Q ss_pred hhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccceeccCCCCC
Q psy10531 322 TGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMICGLTLDSS 401 (564)
Q Consensus 322 ~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 401 (564)
+|.+++|+++.+.. ..|+++++++++.+
T Consensus 294 ~G~~~~W~~~~~~~--------------~~~~~~~~~a~~~~-------------------------------------- 321 (484)
T 2itm_A 294 AASCLDWAAKLTGL--------------SNVPALIAAAQQAD-------------------------------------- 321 (484)
T ss_dssp HHHHHHHHHHHTTC--------------CSHHHHHHHGGGCC--------------------------------------
T ss_pred HHHHHHHHHHhcCc--------------ccHHHHHHHHhcCC--------------------------------------
Confidence 99999999997641 23666666554332
Q ss_pred chhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEeecccCCCCCCCC
Q psy10531 402 ETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWPDFHGNRSPLAD 481 (564)
Q Consensus 402 ~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~r~P~~~ 481 (564)
++++|++|+|||+|+|+|+||
T Consensus 322 -----------------------------------------------------------~~~~gl~~lP~~~G~r~P~~~ 342 (484)
T 2itm_A 322 -----------------------------------------------------------ESAEPVWFLPYLSGERTPHNN 342 (484)
T ss_dssp -----------------------------------------------------------TTSCCCEEEEEEC--------
T ss_pred -----------------------------------------------------------CCCCCeEEeCCCCCCCCCCCC
Confidence 248899999999999999999
Q ss_pred CCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 482 VDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 482 ~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
+++||+|+|++..|+++|+ +||++||++|++|++++.|++.|.+ +++|+++||++||++|+|++||++|+||.++
T Consensus 343 ~~a~g~~~Gl~~~~~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~--~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~ 417 (484)
T 2itm_A 343 PQAKGVFFGLTHQHGPNEL---ARAVLEGVGYALADGMDVVHACGIK--PQSVTLIGGGARSEYWRQMLADISGQQLDYR 417 (484)
T ss_dssp CCEEEEEEEEETTCCHHHH---HHHHHHHHHHHHHHHHHHHHTTTCC--CSCEEEESGGGCCHHHHHHHHHHHCCCEEEE
T ss_pred CCCceEEEcCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCC--cceEEEEeccccCHHHHHHHHHHhCCeEEeC
Confidence 9999999999999999999 9999999999999999999887777 8999999999999999999999999999987
Q ss_pred CC
Q psy10531 562 QE 563 (564)
Q Consensus 562 ~~ 563 (564)
+.
T Consensus 418 ~~ 419 (484)
T 2itm_A 418 TG 419 (484)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 7
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=7.8e-81 Score=683.81 Aligned_cols=415 Identities=20% Similarity=0.342 Sum_probs=367.3
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q 78 (564)
|+|+||||+|||++|++|+|.+|+++++.+++++..+|++||+||||++||+++++++++++. ++++.+|.+|||++|
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 81 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQ 81 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEeCC
Confidence 789999999999999999999999999999999999999999999999999999999999983 445678999999998
Q ss_pred -CceEEEcCC-CCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHH
Q psy10531 79 -CSLVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCW 154 (564)
Q Consensus 79 -~s~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~ 154 (564)
+++|+||++ |+|+ +|+|+|+|+|+.++++++.+. .++++++||+++++.++++||+|+++|+ ||+|
T Consensus 82 ~~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~-pe~~ 151 (510)
T 2p3r_A 82 RETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHV-EGSR 151 (510)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHS-TTHH
T ss_pred cCcEEEEECCCCeEC---------cccccccCccHHHHHHHHHhcccHHHHHHHhCCCCCcccHHHHHHHHHHcC-HHHH
Confidence 899999997 9999 999999999999999999886 4679999999999999999999999999 9999
Q ss_pred hhhcc----ccchhhHHHHhhhC--CccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccC
Q psy10531 155 RRAGL----FFDLPDFLTWKLTG--DETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIG 228 (564)
Q Consensus 155 ~~~~~----~l~~~dyl~~~LTG--~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G 228 (564)
+|+++ |++++|||.|+||| +.++|.++++.+++||+++++||+++|+.+||++. .|| +++++++++|
T Consensus 152 ~~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~LP-~i~~~~~~~G 224 (510)
T 2p3r_A 152 ERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPRE------MLP-EVRRSSEVYG 224 (510)
T ss_dssp HHHHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGG------GCC-EEECSEEEEE
T ss_pred HHHhcCCeEecCHHHHHHHHhcCCCeEEeehhHhhhhccccCccCCCCHHHHHHhCCCHH------HCC-ceecCCCcee
Confidence 99988 77899999999999 67788888888889999999999999999999973 454 8999999999
Q ss_pred CCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhccc-CCCccCCC-ceecccc
Q psy10531 229 HGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALS-AKKVQVPG-VWGPYYE 306 (564)
Q Consensus 229 ~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~-~~p~~~~~-~~~~~~~ 306 (564)
++++ +.+| ++|+||++|++|++|+++|+|++. +|+ +++++|||+++.+.+ ++|+.++. .+. .++
T Consensus 225 -~~~~---~~lG-~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~-~~~ 290 (510)
T 2p3r_A 225 -QTNI---DGKG-GTRIPISGIAGDQQAALFGQLCVK-EGM-------AKNTYGTGCFMLMNTGEKAVKSENGLLT-TIA 290 (510)
T ss_dssp -EECT---TCTT-SCCEEEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEECTTCCCCCSSSCEE-EEE
T ss_pred -eech---hhcC-CCCCeEEEECchHHHHHHhcCCCC-CCc-------EEEeecchheeEEecCCccccCCCCeeE-EEe
Confidence 8975 4577 899999999999999999999998 898 999999998765544 56655543 322 122
Q ss_pred ccc--CCeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCC
Q psy10531 307 VIL--PNTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPL 384 (564)
Q Consensus 307 ~~~--~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 384 (564)
+.. ++.|.++++++++|.+++|+++.+.. ...|+++++++++.+
T Consensus 291 ~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~-------------~~~~~~l~~~a~~~~--------------------- 336 (510)
T 2p3r_A 291 CGPTGEVNYALEGAVFMAGASIQWLRDEMKL-------------INDAYDSEYFATKVQ--------------------- 336 (510)
T ss_dssp ECTTSCEEEEEEEEESCSHHHHHHHHHTSCC-------------CCSSSCHHHHHTTSS---------------------
T ss_pred eecCCCceEEEccchhhHHHHHHHHHHHccC-------------CCcHHHHHHHHhhCC---------------------
Confidence 222 35899999999999999999998752 112445555543321
Q ss_pred CCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCc
Q psy10531 385 ADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTA 464 (564)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 464 (564)
+++
T Consensus 337 -----------------------------------------------------------------------------~~~ 339 (510)
T 2p3r_A 337 -----------------------------------------------------------------------------NTN 339 (510)
T ss_dssp -----------------------------------------------------------------------------SCT
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 378
Q ss_pred ceEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCCCEEEEEcCCccc
Q psy10531 465 DFHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAA-GKTPAISTLLVSGGLAKN 543 (564)
Q Consensus 465 gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~-g~~~~~~~i~~~GG~a~s 543 (564)
|++|+|||.|+|+|+||+++||+|+|++..|+++|+ +||++||+||.+|++++.|++. |.+ +++|+++||++||
T Consensus 340 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~--~~~i~~~GGga~s 414 (510)
T 2p3r_A 340 GVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHI---IRATLESIAYQTRDVLEAMQADSGIR--LHALRVDGGAVAN 414 (510)
T ss_dssp TCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCC--CSEEEEESGGGGC
T ss_pred ceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--ccEEEEeCchhcC
Confidence 999999999999999999999999999999999999 9999999999999999999875 877 8999999999999
Q ss_pred HHHHHHHhhhcCCeeeccC
Q psy10531 544 PLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 544 ~~~~q~~Adv~g~~v~~~~ 562 (564)
++|+||+||++|+||.++.
T Consensus 415 ~~~~Qi~ADv~g~pV~~~~ 433 (510)
T 2p3r_A 415 NFLMQFQSDILGTRVERPE 433 (510)
T ss_dssp HHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHHHHhCCceEecC
Confidence 9999999999999998875
No 8
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=1.9e-80 Score=680.45 Aligned_cols=415 Identities=22% Similarity=0.362 Sum_probs=368.0
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q 78 (564)
|+|+||||+||||+|++|+|.+|+++++.+++++..+|++||+||||++||+++++++++++ .++++.+|.+|||++|
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 83 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQ 83 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhheEEEEeeCC
Confidence 35999999999999999999999999999999999999999999999999999999999997 3455678999999998
Q ss_pred -CceEEEcCC-CCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHH
Q psy10531 79 -CSLVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCW 154 (564)
Q Consensus 79 -~s~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~ 154 (564)
+++|+||++ |+|+ +|+|+|+|+|+.++++++.+. .++++++||+++++.++++||+|+++|+ ||+|
T Consensus 84 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~-pe~~ 153 (506)
T 3h3n_X 84 RETTVVWDKTTGQPI---------ANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNI-EGAQ 153 (506)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCCCTTSHHHHHHHHHHHS-TTHH
T ss_pred cccEEEEeCCCCeEC---------CCceEecCcchHHHHHHHHhccCHHHHHHHhCCCCCchhHHHHHHHHHHhC-HHHH
Confidence 999999997 9999 999999999999999999886 4679999999999999999999999999 9999
Q ss_pred hhhcc----ccchhhHHHHhhhC--CccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccC
Q psy10531 155 RRAGL----FFDLPDFLTWKLTG--DETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIG 228 (564)
Q Consensus 155 ~~~~~----~l~~~dyl~~~LTG--~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G 228 (564)
+++++ |++++|||.|+||| +.++|.++++.+++||+++++||+++|+.+||++. .| |+++++++++|
T Consensus 154 ~~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~L-P~i~~~~~~~G 226 (506)
T 3h3n_X 154 EKADNGELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSS------ML-PEVKSNSEVYG 226 (506)
T ss_dssp HHHHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHHTTTSEETTTTEECHHHHHHTTCCGG------GC-CEEECSEEEEE
T ss_pred HHHhcCCeEEecHHHHHHHHhcCCceeeeEHHHhhhhhCeecCCCCcCHHHHHHcCcCHH------HC-CceecCCCcce
Confidence 99986 77899999999999 56778888888889999999999999999999973 45 58999999999
Q ss_pred CCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhccc-CCCccCC-Cceecccc
Q psy10531 229 HGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALS-AKKVQVP-GVWGPYYE 306 (564)
Q Consensus 229 ~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~-~~p~~~~-~~~~~~~~ 306 (564)
++++++ .+| +|+||++|++|++|+++|+|++. +|+ +++++|||+++.+.+ ++|..++ +.+. .++
T Consensus 227 -~~~~~~--~lg--~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~-~~~ 292 (506)
T 3h3n_X 227 -HTRSYR--FYG--SEVPIAGMAGDQQAALFGQMAFE-KGM-------IKNTYGTGAFIVMNTGEEPQLSDNDLLT-TIG 292 (506)
T ss_dssp -ECCGGG--TTT--CCCEEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEEEETCCCSCCTTSEE-EEE
T ss_pred -eeChHH--hcC--CCCeEEEECCcHHHHHHhCCCCC-CCc-------EEEEecchheeeeecCCccccCCCceEE-Eee
Confidence 899886 467 79999999999999999999998 898 999999999776655 4555444 3332 223
Q ss_pred cccCC--eeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCC
Q psy10531 307 VILPN--THLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPL 384 (564)
Q Consensus 307 ~~~~~--~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 384 (564)
+..++ .|.++++++++|.+++|+++.+.. ...|+++++++++.+
T Consensus 293 ~~~~g~~~~~~~g~~~~~G~~~~W~~~~~~~-------------~~~~~~l~~~a~~~~--------------------- 338 (506)
T 3h3n_X 293 YGINGKVYYALEGSIFVAGSAIQWLRDGLRM-------------IETSPQSEELAAKAK--------------------- 338 (506)
T ss_dssp EEETTEEEEEEEEEECCSSHHHHHHHHTSCC-------------CSSTTHHHHHHTTCC---------------------
T ss_pred eecCCCCEEEEecchhhHHHHHHHHHHHcCC-------------CCcHHHHHHHHhcCC---------------------
Confidence 33454 699999999999999999998752 123566666654332
Q ss_pred CCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCc
Q psy10531 385 ADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTA 464 (564)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 464 (564)
..+
T Consensus 339 -----------------------------------------------------------------------------~~~ 341 (506)
T 3h3n_X 339 -----------------------------------------------------------------------------GDN 341 (506)
T ss_dssp -----------------------------------------------------------------------------SCS
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 148
Q ss_pred ceEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCccc
Q psy10531 465 DFHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLAKN 543 (564)
Q Consensus 465 gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a~s 543 (564)
|++|+|||+|+|+|+||+++||+|+|++..|+++|+ +||++||+||.+|++++.|++ .|.+ +++|+++||++||
T Consensus 342 gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~--~~~i~~~GGga~s 416 (506)
T 3h3n_X 342 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDF---VRATLQAVAYQSKDVIDTMKKDSGID--IPLLKVDGGAAKN 416 (506)
T ss_dssp CCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHCSC--CCEEEEESGGGGC
T ss_pred ceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--CCEEEEecccccC
Confidence 999999999999999999999999999999999999 999999999999999999987 4877 8999999999999
Q ss_pred HHHHHHHhhhcCCeeeccC
Q psy10531 544 PLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 544 ~~~~q~~Adv~g~~v~~~~ 562 (564)
++|+||+||++|+||++++
T Consensus 417 ~~~~Qi~ADv~g~pV~~~~ 435 (506)
T 3h3n_X 417 DLLMQFQADILDIDVQRAA 435 (506)
T ss_dssp HHHHHHHHHHHTSEEEECS
T ss_pred HHHHHHHHHHhCCeEEecC
Confidence 9999999999999999875
No 9
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.8e-80 Score=677.63 Aligned_cols=412 Identities=22% Similarity=0.380 Sum_probs=360.9
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC-
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT- 78 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q- 78 (564)
+|+||||+|||++|++++|.+|+++++.+.+++..+|++||+||||++||+++++++++++. ++++.+|.+|||++|
T Consensus 26 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis~~g 105 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITANDIAAIGITNQR 105 (520)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEECS
T ss_pred CeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCCc
Confidence 49999999999999999999999999999999999999999999999999999999999983 345678999999999
Q ss_pred CceEEEc-CCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHh
Q psy10531 79 CSLVALD-TNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWR 155 (564)
Q Consensus 79 ~s~v~~D-~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~ 155 (564)
+++|+|| ++|+|+ +|+|+|+|+|+.++++++.+. .++++++||+++++.++++||+|+++|+ ||+|+
T Consensus 106 ~~~v~~D~~~G~~l---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~-Pe~~~ 175 (520)
T 4e1j_A 106 ETVVVWDRETGKPI---------HNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNV-KGAQV 175 (520)
T ss_dssp SCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSSCSSTTSHHHHHHHHHHHS-TTHHH
T ss_pred ceEEEEECCCCeEC---------ccccccccCCHHHHHHHHHhcccHHHHHHHHCCCCCchhHHHHHHHHHHcC-hHHHH
Confidence 8999999 699999 999999999999999999886 3679999999999999999999999999 99999
Q ss_pred hhcc----ccchhhHHHHhhhCC--ccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCC
Q psy10531 156 RAGL----FFDLPDFLTWKLTGD--ETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGH 229 (564)
Q Consensus 156 ~~~~----~l~~~dyl~~~LTG~--~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~ 229 (564)
|+++ |++++|||.|+|||+ .++|.++++.+++||+++++||+++|+.+||++. .|| +++++++++|
T Consensus 176 ~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~LP-~i~~~~~~~G- 247 (520)
T 4e1j_A 176 RAAKGELCFGTIDTFLIWRLTGGECFCTDATNASRTLLYNIAENAWDDELTEVLRVPKE------MLP-EVKDCAADFG- 247 (520)
T ss_dssp HHHTTCEEEEEHHHHHHHHHTTTCCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGG------GSC-EEECSBSCCC-
T ss_pred HHhcCCeEecCHHHHHHHHhcCCCeeeecHHHhhhhcccccccCCCCHHHHHHcCCCHH------HCC-ceecCCCcee-
Confidence 9985 668999999999996 5677778888889999999999999999999973 565 8999999999
Q ss_pred CCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhccc-CCCccCC-Cceeccccc
Q psy10531 230 GVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALS-AKKVQVP-GVWGPYYEV 307 (564)
Q Consensus 230 ~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~-~~p~~~~-~~~~~~~~~ 307 (564)
+++++ ||++|+||++|++|++|+++|+|++. +|+ +++++|||+++.+.+ ++|..++ +.+.. +++
T Consensus 248 ~~~~~-----~l~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~-~~~ 313 (520)
T 4e1j_A 248 VTDPS-----LFGAAIPILGVAGDQQAATIGQACFK-PGM-------LKSTYGTGCFALLNTGKDMVRSKNRLLTT-IAY 313 (520)
T ss_dssp BCCHH-----HHTSCCBEEEECCHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEECTTCCCCCSSSCEEE-EEE
T ss_pred eeChh-----hCCCCCeEEEECCcHHHHHHhCCCCC-CCc-------EEEEecCchheEEecCCccccCCCceeeE-EeE
Confidence 89874 46789999999999999999999988 898 999999999877766 6666554 33321 222
Q ss_pred ccC--CeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCC
Q psy10531 308 ILP--NTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLA 385 (564)
Q Consensus 308 ~~~--~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 385 (564)
..+ +.|.++++++++|.+++|+++.+.. ...|+++++++++.+
T Consensus 314 ~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~-------------~~~~~~l~~~a~~~~---------------------- 358 (520)
T 4e1j_A 314 RLDGETTYALEGSIFVAGAAVQWLRDGLKV-------------IKAAPDTGSLAESAD---------------------- 358 (520)
T ss_dssp EETTEEEEEEEEEESCSHHHHHHHHHTTCC-------------C-----CHHHHHTSC----------------------
T ss_pred ecCCCceEEEcchHhhHHHHHHHHHHHcCC-------------cccHHHHHHHHhcCC----------------------
Confidence 223 3799999999999999999998752 223566666554331
Q ss_pred CCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcc
Q psy10531 386 DADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTAD 465 (564)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g 465 (564)
+++|
T Consensus 359 ----------------------------------------------------------------------------~~~g 362 (520)
T 4e1j_A 359 ----------------------------------------------------------------------------PSQE 362 (520)
T ss_dssp ----------------------------------------------------------------------------TTCC
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 3789
Q ss_pred eEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCCCCCEEEEEcCCc
Q psy10531 466 FHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAA----GKTPAISTLLVSGGLA 541 (564)
Q Consensus 466 l~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~----g~~~~~~~i~~~GG~a 541 (564)
++|+|||+|+|+|+||+++||+|+|++..|+++|+ +||++||+||.+|+++|.|++. | + +++|+++||++
T Consensus 363 l~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~r~~l~~l~~~~~~~g-~--~~~i~~~GGga 436 (520)
T 4e1j_A 363 VYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEF---ARAALEAVCYQTRDLLEAMHKDWRRNG-N--DTVLRVDGGMV 436 (520)
T ss_dssp CEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHCC--------CCEEEESGGG
T ss_pred EEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhhccCC-C--cceEEEeCccc
Confidence 99999999999999999999999999999999999 9999999999999999999886 6 6 89999999999
Q ss_pred ccHHHHHHHhhhcCCeeeccC
Q psy10531 542 KNPLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 542 ~s~~~~q~~Adv~g~~v~~~~ 562 (564)
||++|+||+||++|+||++++
T Consensus 437 ks~~~~Qi~ADvlg~pV~~~~ 457 (520)
T 4e1j_A 437 ASDWTMQRLSDLLDAPVDRPV 457 (520)
T ss_dssp GCHHHHHHHHHHHTSCEEEES
T ss_pred cCHHHHHHHHHHhCCeEEecC
Confidence 999999999999999999875
No 10
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=5.6e-80 Score=676.07 Aligned_cols=416 Identities=23% Similarity=0.387 Sum_probs=368.0
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q 78 (564)
|+|+||||+|||++|++|+|.+|+++++.+++++..+|++||+||||++||+++++++++++. ++++.+|.+|||++|
T Consensus 5 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~~ 84 (501)
T 3g25_A 5 EKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQ 84 (501)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEEC
T ss_pred ccEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEECC
Confidence 259999999999999999999999999999999999999999999999999999999999983 345678999999998
Q ss_pred -CceEEEcCC-CCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHH
Q psy10531 79 -CSLVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCW 154 (564)
Q Consensus 79 -~s~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~ 154 (564)
+++++||++ |+|+ +|+|+|+|+|+.++++++++. .++++++||+++++.++++||+|+++|+ ||+|
T Consensus 85 ~~~~v~~D~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~~~ 154 (501)
T 3g25_A 85 RETTVVWDKHTGRPI---------YHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNV-EGAR 154 (501)
T ss_dssp SSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCSSTTSHHHHHHHHHHHS-TTHH
T ss_pred cCcEEEEECCCCeEC---------CCceeeccCChHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhC-HHHH
Confidence 999999998 9999 999999999999999999886 4679999999999999999999999999 9999
Q ss_pred hhhcc----ccchhhHHHHhhhC--CccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccC
Q psy10531 155 RRAGL----FFDLPDFLTWKLTG--DETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIG 228 (564)
Q Consensus 155 ~~~~~----~l~~~dyl~~~LTG--~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G 228 (564)
+|+++ |++++|||.|+||| +.++|.++++.+++||+++++||+++|+.+||++. .| |+++++++++|
T Consensus 155 ~~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~L-P~i~~~~~~~G 227 (501)
T 3g25_A 155 EKAENGDLLFGTIDTWLVWKLSGKAAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKN------ML-PEVKASSEVYG 227 (501)
T ss_dssp HHHHTTCEEEEEHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGG------GC-CEEECSEEEEE
T ss_pred HHHhcCCeEEecHHHHHHHHhcCCCeeeeeHHHhhcccCeeCCCCCCCHHHHHHhCcCHH------HC-CceecCCCcee
Confidence 99988 77899999999999 67788888888889999999999999999999973 45 48999999999
Q ss_pred CCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccC-CCccCC-Cceecccc
Q psy10531 229 HGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSA-KKVQVP-GVWGPYYE 306 (564)
Q Consensus 229 ~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~-~p~~~~-~~~~~~~~ 306 (564)
+++++. .+| +|+||++|++|++|+++|+|++. +|+ +++++|||+++.+.++ +|+.++ +.+. .++
T Consensus 228 -~~~~~~--~~g--~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~-~~~ 293 (501)
T 3g25_A 228 -KTIDYH--FYG--QEVPIAGVAGDQQAALFGQACFE-RGD-------VKNTYGTGGFMLMNTGDKAVKSESGLLT-TIA 293 (501)
T ss_dssp -ECCGGG--TTT--CCCEEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEECTTSCCCCSSSCEE-EEE
T ss_pred -ccchHH--hCC--CCCeEEEECccHHHHHHhCCCCC-CCc-------EEEEccchhheeeecCCccccCCCCeEE-Eee
Confidence 899864 455 79999999999999999999998 898 9999999998776654 555554 3332 233
Q ss_pred cccCC--eeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCC
Q psy10531 307 VILPN--THLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPL 384 (564)
Q Consensus 307 ~~~~~--~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 384 (564)
+..++ .|.++++++++|.+++|+++.+.. ...|+++++++++.+
T Consensus 294 ~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~-------------~~~~~~l~~~a~~~~--------------------- 339 (501)
T 3g25_A 294 YGIDGKVNYALEGSIFVSGSAIQWLRDGLRM-------------INSAPQSESYATRVD--------------------- 339 (501)
T ss_dssp EEETTEEEEEEEEEESCSTHHHHHHHHTSCC-------------CSSGGGHHHHHTTSS---------------------
T ss_pred EecCCccEEEEecccccHHHHHHHHHHHcCC-------------CCcHHHHHHHHhhCC---------------------
Confidence 44455 799999999999999999998752 123556666554332
Q ss_pred CCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCc
Q psy10531 385 ADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTA 464 (564)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 464 (564)
..+
T Consensus 340 -----------------------------------------------------------------------------~~~ 342 (501)
T 3g25_A 340 -----------------------------------------------------------------------------STE 342 (501)
T ss_dssp -----------------------------------------------------------------------------CCT
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 157
Q ss_pred ceEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCccc
Q psy10531 465 DFHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLAKN 543 (564)
Q Consensus 465 gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a~s 543 (564)
|++|+|||+|+|+|+||+++||+|+|++..|+++|+ +||++||+||.+|++++.|++ .|.+ +++|+++||++||
T Consensus 343 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~RAvlEgia~~~~~~~~~l~~~~g~~--~~~i~~~GG~aks 417 (501)
T 3g25_A 343 GVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHF---IRATLESLCYQTRDVMEAMSKDSGID--VQSLRVDGGAVKN 417 (501)
T ss_dssp TCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHSSCC--CSEEEEESGGGGC
T ss_pred eEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--CcEEEEecchhcC
Confidence 999999999999999999999999999999999999 999999999999999999987 5877 8999999999999
Q ss_pred HHHHHHHhhhcCCeeeccCC
Q psy10531 544 PLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 544 ~~~~q~~Adv~g~~v~~~~~ 563 (564)
++|+||+||++|+||.+++.
T Consensus 418 ~~~~Qi~Adv~g~pV~~~~~ 437 (501)
T 3g25_A 418 NFIMQFQADIVNTSVERPEI 437 (501)
T ss_dssp HHHHHHHHHHHTSEEEEESC
T ss_pred HHHHHHHHHHhCCceEecCC
Confidence 99999999999999988753
No 11
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=2.6e-79 Score=671.64 Aligned_cols=407 Identities=17% Similarity=0.223 Sum_probs=367.3
Q ss_pred cEEEEEEeCccceEEEEEe-CCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC-C
Q psy10531 2 EYLLSVDVGTSSVRAALVS-TRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT-C 79 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d-~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q-~ 79 (564)
+|+||||+|||++|++||| .+|+++++.+.++ +||+||||++||++++++++++. . ..+|.+|||++| +
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~------~g~~e~d~~~~~~~i~~~l~~~~--~-~~~I~~Igis~q~~ 75 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGELVRFGQAKH------PNGTSVDPSYWWSAFQEAAEQAG--G-LDDVSALAVGGQQH 75 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------CSSSEECTHHHHHHHHHHHHHTT--C-STTEEEEEEEECSS
T ss_pred cEEEEEEeccccEEEEEEECCCCeEEEEEEEeC------CCCceECHHHHHHHHHHHHHhcC--C-ccCceEEEEeCCcc
Confidence 5999999999999999999 8999999998876 48999999999999999998753 2 478999999999 8
Q ss_pred ceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--h----------------hHHHHHhCCCCCCcChHHH
Q psy10531 80 SLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--K----------------HSVLDTVGGKISPEMETPK 141 (564)
Q Consensus 80 s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~----------------~~i~~~tG~~~~~~~~~~k 141 (564)
++|+||++|+|+ +|+|+|+|+|+.++++++++. . ++++++||+++++.++++|
T Consensus 76 ~~v~~D~~G~pl---------~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~k 146 (515)
T 3i8b_A 76 GMVILDNQGNVI---------RDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTK 146 (515)
T ss_dssp CBEEECTTSCBC---------SCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHHHH
T ss_pred eEEEECCCCCCc---------CCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHHHH
Confidence 999999999999 999999999999999999875 2 6799999999999999999
Q ss_pred HHHHHHhCChhHHhhhccccchhhHHHHhhhCC-------------ccccccccccccccccccCCCCHHHHHHc-CCC-
Q psy10531 142 LLWLKKNLPDTCWRRAGLFFDLPDFLTWKLTGD-------------ETQSLCSLVCKWTYDAYDRRWNEDYFEKI-GLG- 206 (564)
Q Consensus 142 l~Wl~~~~~Pe~~~~~~~~l~~~dyl~~~LTG~-------------~~~s~as~s~~~l~d~~~~~W~~ell~~~-gi~- 206 (564)
|+|+++|+ ||+|+|+++|++++|||.|+|||+ .++|.++++.+++||+++++|++++|+.+ ||+
T Consensus 147 l~Wl~~~~-Pe~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~~gi~~ 225 (515)
T 3i8b_A 147 VAWVAENE-PENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMVLEAAE 225 (515)
T ss_dssp HHHHHHHC-HHHHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHHTTSSSEETTTTEECHHHHHHHHHHHH
T ss_pred HHHHHHcC-hHHHHHHheecCHHHHHHHHhcCCCcccccccccccceeecHHHhhcccCeeCCcCccCHHHHHhhcCCCc
Confidence 99999999 999999999999999999999998 46777788888899999999999999998 997
Q ss_pred ----------ccccccccccCCcccCCCcccCCCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCc
Q psy10531 207 ----------DLKQNGWRAIGNTVKNPGQPIGHGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSK 276 (564)
Q Consensus 207 ----------~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~ 276 (564)
.. +|| +++++++++| ++++++|+++||++|+||++|++|++|+++|+| +. +|+
T Consensus 226 ~~~~~~~~~~~~------~LP-~i~~~~~~~G-~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g-~~-~g~------- 288 (515)
T 3i8b_A 226 GAKAAQSHAEAI------VLP-TVLGPRDAAP-VKADPAIAGKNVEGGCLLAPGGGDNAMASLGLG-MA-VGD------- 288 (515)
T ss_dssp CHHHHHHHHHHS------BCC-EEECTTCCCS-SCCCTTTTTTTSTTCCEECCCEEHHHHHHHHTT-CC-TTE-------
T ss_pred ccccccccchHH------HCC-CCcCCcCccc-CcCHHHHHHhCCCCCCeEEEECchHHHHHhhCC-CC-CCc-------
Confidence 32 565 8999999999 999999999999999999999999999999999 87 888
Q ss_pred EEEEEccchhhhcccCCCccCCCceecccccccCCeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHH
Q psy10531 277 LGLICGTSTCHMALSAKKVQVPGVWGPYYEVILPNTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLN 356 (564)
Q Consensus 277 ~~~s~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 356 (564)
+++++|||+++.+++++|..++......+.+. ++.|+.++++.++|.+++|+++.+. ..|++|+
T Consensus 289 ~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~gg~~l~w~~~~~~---------------~~~~~l~ 352 (515)
T 3i8b_A 289 VSISLGTSGVAAAISENPTYDLTGAVSGFADC-TGHYLPLACTINGSRILDAGRAALG---------------VDYDELA 352 (515)
T ss_dssp EEEEESSSEEEEECBSSCCCCTTSCSEEEECS-SSSEEEEEEESCSTHHHHHHHHHHT---------------CCHHHHH
T ss_pred EEEEechhhhhhcccCccccCCCCcEEeeecC-CCCEEEeeecccHHHHHHHHHHHhC---------------CCHHHHH
Confidence 99999999999999999887764322223333 7889999999999999999998653 1378888
Q ss_pred HHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchh
Q psy10531 357 HVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDAT 436 (564)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~ 436 (564)
+++++++
T Consensus 353 ~~a~~~~------------------------------------------------------------------------- 359 (515)
T 3i8b_A 353 KLAFASK------------------------------------------------------------------------- 359 (515)
T ss_dssp HHHHHSC-------------------------------------------------------------------------
T ss_pred HHHHhCC-------------------------------------------------------------------------
Confidence 8877653
Q ss_pred hhhhhhhcCCcceeeCCCCCCcccccCcceEEeecccCCCCCCCCCCccccEecCCCCC-ChhhHHHHHHHHHHHHHHHH
Q psy10531 437 CSLVALDTNHQPLTISPTDTRHSTELTADFHVWPDFHGNRSPLADVDMKGMICGLTLDS-SETSLVTLYLATIQALAYGT 515 (564)
Q Consensus 437 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~-~~~~~~~~~~A~~Egva~~~ 515 (564)
++++|++|+|||.|+|+|+| +++||+|+|++..| +++|+ +||++||++|.+
T Consensus 360 ------------------------~g~~gl~~lP~~~Ger~P~~-~~arg~~~Gl~~~~~~~~~l---~RAvlEgia~~~ 411 (515)
T 3i8b_A 360 ------------------------PGANGITLVPYFDGERTPNR-PNATATFSGMTLANTTRENL---ARAFVEGLLCSQ 411 (515)
T ss_dssp ------------------------TTGGGCEEECCTTCBTTTTB-TTCCCEEESCCTTTCSHHHH---HHHHHHHHHHHH
T ss_pred ------------------------CCCCCeEEecCCCCCcCCCC-cCcceEEecCCCCCCCHHHH---HHHHHHHHHHHH
Confidence 13789999999999999976 99999999999999 99999 999999999999
Q ss_pred HHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeeccCC
Q psy10531 516 RHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 516 ~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
|++++.|++.|.+ +++|+++||++||++|+||+||+||+||.+++.
T Consensus 412 r~~l~~l~~~g~~--~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~ 457 (515)
T 3i8b_A 412 RDCLELIRSLGAS--ITRILLIGGGAKSEAIRTLAPSILGMDVTRPAT 457 (515)
T ss_dssp HHHHHHHHHTTCC--CCEEEEESGGGGCHHHHHHHHHHHTSCEEEECC
T ss_pred HHHHHHHHHcCCC--CCEEEEECchhcCHHHHHHHHHHhCCceEecCC
Confidence 9999999998888 899999999999999999999999999998753
No 12
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=3.8e-79 Score=673.06 Aligned_cols=416 Identities=20% Similarity=0.345 Sum_probs=361.9
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC-
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT- 78 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q- 78 (564)
+|+||||+||||+|++|||.+|+++++.+++++.++|++||+||||++||+++++++++++ .++++++|++||||+|
T Consensus 4 kYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis~q~ 83 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQR 83 (526)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECS
T ss_pred eEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhEEEEEEeCCC
Confidence 6999999999999999999999999999999999999999999999999999999999998 4567789999999999
Q ss_pred CceEEEcC-CCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHh
Q psy10531 79 CSLVALDT-NHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWR 155 (564)
Q Consensus 79 ~s~v~~D~-~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~ 155 (564)
+++|+||+ +|+|| +|+|+|+|+|+.++++++.+. .+.++++||+++++.++++||+|+++|+ |++|+
T Consensus 84 ~~~v~~D~~~G~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~-p~~~~ 153 (526)
T 3ezw_A 84 ETTIVWEKETGKPI---------YNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHV-EGSRE 153 (526)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHS-TTHHH
T ss_pred CCEEEEECCCCeEc---------ccceecCCcchHHHHHHHHhhccHHHHHHHhCCCCCcccHHHHHHHHHHcC-chHHH
Confidence 89999997 59999 999999999999999999886 3579999999999999999999999999 99999
Q ss_pred hhcc----ccchhhHHHHhhhCCc--cccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCC
Q psy10531 156 RAGL----FFDLPDFLTWKLTGDE--TQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGH 229 (564)
Q Consensus 156 ~~~~----~l~~~dyl~~~LTG~~--~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~ 229 (564)
++++ +..+++||.|+|||.. +++.++++.+++||+++++||+++++.+||+.. .| |+++++++++|
T Consensus 154 ~~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi~~~------~L-P~i~~~~~~~G- 225 (526)
T 3ezw_A 154 RARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPRE------ML-PEVRRSSEVYG- 225 (526)
T ss_dssp HHHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGG------GC-CEEECSEEEEE-
T ss_pred HHHHhhhhccchhHHHhhhhcCCCceEEEchhhccccCcCccccCcCHHHHHHcCCCHH------HC-CCccccccccC-
Confidence 9987 5578889999999753 467777777889999999999999999999973 45 58999999999
Q ss_pred CCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccCCCccCCC--ceeccc-c
Q psy10531 230 GVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPG--VWGPYY-E 306 (564)
Q Consensus 230 ~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~--~~~~~~-~ 306 (564)
.++++++. ..|+||++|++|++++++|+|++. +|+ +.+++|||+++.+.++++...+. ....+. .
T Consensus 226 ~~~~~~~~----~~gipV~~g~gD~~aa~~G~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (526)
T 3ezw_A 226 QTNIDGKG----GTRIPISGIAGDQQAALFGQLCVK-EGM-------AKNTYGTGCFMLMNTGEKAVKSENGLLTTIACG 293 (526)
T ss_dssp EECTTCTT----SCCEEEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEECTTSCCCCSSSCEEEEEEC
T ss_pred ccchhhhc----CCCCcEEEEcchHHHHhhhccccc-cce-------eEEEeccCeeEecccCCccccccccceeeeeec
Confidence 89877653 356899999999999999999998 898 99999999999888887765543 222111 1
Q ss_pred cccCCeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCC
Q psy10531 307 VILPNTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLAD 386 (564)
Q Consensus 307 ~~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 386 (564)
...++.|.+++++.++|.+++||++.+...+ . .. .. +.+..
T Consensus 294 ~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~-------~---~~---~~-~~~~~------------------------- 334 (526)
T 3ezw_A 294 PTGEVNYALEGAVFMAGASIQWLRDEMKLIN-------D---AY---DS-EYFAT------------------------- 334 (526)
T ss_dssp TTSCEEEEEEEEESCSHHHHHHHHHTSCCCC-------S---SS---CH-HHHHT-------------------------
T ss_pred cCCcceeeeHHHHHHHHHHHHHHHHHhcccc-------c---hh---HH-HHHHh-------------------------
Confidence 2235579999999999999999999875210 0 00 00 00110
Q ss_pred CCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcce
Q psy10531 387 ADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADF 466 (564)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl 466 (564)
.+++++|+
T Consensus 335 ------------------------------------------------------------------------~~~~~~gl 342 (526)
T 3ezw_A 335 ------------------------------------------------------------------------KVQNTNGV 342 (526)
T ss_dssp ------------------------------------------------------------------------TSSSCTTC
T ss_pred ------------------------------------------------------------------------ccCCCCCe
Confidence 11248899
Q ss_pred EEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCcccHH
Q psy10531 467 HVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLAKNPL 545 (564)
Q Consensus 467 ~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a~s~~ 545 (564)
+|+|||+|+|+|+|||++||+|+||+..|+++|+ +||++||+||++|++++.|++ .|.+ +++|+++||++||++
T Consensus 343 ~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i---~RAvlEgia~~~r~~le~l~~~~g~~--~~~i~v~GGgaks~~ 417 (526)
T 3ezw_A 343 YVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHI---IRATLESIAYQTRDVLEAMQADSGIR--LHALRVDGGAVANNF 417 (526)
T ss_dssp EEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCC--CSEEEEESGGGGCHH
T ss_pred EEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--CCEEEEECchhhCHH
Confidence 9999999999999999999999999999999999 999999999999999999986 5888 999999999999999
Q ss_pred HHHHHhhhcCCeeeccCC
Q psy10531 546 YVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 546 ~~q~~Adv~g~~v~~~~~ 563 (564)
|+||+|||||+||.+++.
T Consensus 418 ~~Qi~ADvlg~pV~~~~~ 435 (526)
T 3ezw_A 418 LMQFQSDILGTRVERPEV 435 (526)
T ss_dssp HHHHHHHHHTSEEEEESC
T ss_pred HHHHHHHHHCCEEEeCCC
Confidence 999999999999998764
No 13
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.3e-78 Score=662.91 Aligned_cols=415 Identities=23% Similarity=0.348 Sum_probs=370.5
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q 78 (564)
|+|+||||+|||++|++++|.+|+++++.+++++..+|++||+||||++||+++++++++++. ++++.+|.+|||++|
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis~~ 81 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQ 81 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred CcEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEecC
Confidence 358999999999999999999999999999999999999999999999999999999999873 345678999999998
Q ss_pred -CceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc-hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHhh
Q psy10531 79 -CSLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT-KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWRR 156 (564)
Q Consensus 79 -~s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~-~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~~ 156 (564)
+++|+||++|+|+ +|+|+|+|.|+.++++++.+. .++++++||+++++.++++||+|+++|+ |++|+|
T Consensus 82 ~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~~~~~ 151 (497)
T 2zf5_O 82 RETTLVWDKDGKPL---------YNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNV-PGLREK 151 (497)
T ss_dssp SSCEEEECTTCCBS---------SCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHS-TTHHHH
T ss_pred CCcEEEECCCCCCc---------ccceeecccCcHHHHHHHHhhhHHHHHHHhCCCCCchhHHHHHHHHHHcC-HHHHHH
Confidence 9999999999999 999999999999999999875 4579999999999999999999999999 999999
Q ss_pred hcc----ccchhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCC
Q psy10531 157 AGL----FFDLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVS 232 (564)
Q Consensus 157 ~~~----~l~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~ 232 (564)
+++ |++++|||.|+|||+.+++.++++.+++||+++++||+++|+.+||+.. .| |+|+++++++| +++
T Consensus 152 ~~~~~~~~~~~~d~l~~~LTG~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~l-P~i~~~~~~~G-~~~ 223 (497)
T 2zf5_O 152 AEKGEVMFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPES------VL-PEVRESSEVYG-YTK 223 (497)
T ss_dssp HHTTCCEEEEHHHHHHHHHHSCCEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGG------GC-CEEECSEEEEE-ECC
T ss_pred HhcCCCEEEcHHHHHHHHHhCCeeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCHH------HC-CCcCCCCCeee-ecC
Confidence 988 8899999999999999888888888889999999999999999999973 45 58999999999 899
Q ss_pred HHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccCCCccCCCceecccccccCC-
Q psy10531 233 TEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPGVWGPYYEVILPN- 311 (564)
Q Consensus 233 ~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~~~~~~~~~~~~~- 311 (564)
++ .+| +|+||++|++|++|+++|+|++. +|+ +++++|||+++.+.+++|..++......+++..++
T Consensus 224 ~~---~~g--~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (497)
T 2zf5_O 224 KE---LLG--AEIPVSGDAGDQQAALFGQAAFE-AGM-------VKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGR 290 (497)
T ss_dssp HH---HHS--SCCEEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEEEETCCCCCTTSEEEEEEEETTE
T ss_pred HH---HcC--CCCeEEEEccHHHHHHHhCCCCC-CCc-------EEEEcchhheeeEECCCCccCCCCcEEEEEEEcCCC
Confidence 87 588 89999999999999999999988 898 99999999999998888876553221223333444
Q ss_pred -eeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcc
Q psy10531 312 -THLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMK 390 (564)
Q Consensus 312 -~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 390 (564)
.|.++++++++|..++|+++.+.. ...|+++++++++.+
T Consensus 291 ~~~~~~g~~~~~G~~~~w~~~~~~~-------------~~~~~~l~~~a~~~~--------------------------- 330 (497)
T 2zf5_O 291 VSYALEGSIFVTGAAVQWLRDGIKI-------------IKHASETEELATKLE--------------------------- 330 (497)
T ss_dssp EEEEEEEEESCSHHHHHHHHHTSCC-------------CSCGGGHHHHHTTSS---------------------------
T ss_pred CEEEEechhhhHHHHHHHHHHHhCC-------------CCcHHHHHHHHhhCC---------------------------
Confidence 799999999999999999997642 122455555543221
Q ss_pred cceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEee
Q psy10531 391 GMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWP 470 (564)
Q Consensus 391 ~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P 470 (564)
+++|++|+|
T Consensus 331 -----------------------------------------------------------------------~~~gl~~~P 339 (497)
T 2zf5_O 331 -----------------------------------------------------------------------SNEGVYFVP 339 (497)
T ss_dssp -----------------------------------------------------------------------SCTTCEEEC
T ss_pred -----------------------------------------------------------------------CCCceEEec
Confidence 367999999
Q ss_pred cccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHH
Q psy10531 471 DFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTH 550 (564)
Q Consensus 471 ~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~ 550 (564)
||.|+|+|+||+++||+|+|++..|+++|+ +||++||++|.+|++++.|++.+ + +++|+++||++||++|+|++
T Consensus 340 ~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~--~~~i~~~GG~a~s~~~~Qi~ 413 (497)
T 2zf5_O 340 AFVGLGAPYWDQFARGIIIGITRGTGREHL---ARATLEAIAYLTRDVVDEMEKLV-Q--IKELRVDGGATANDFLMQFQ 413 (497)
T ss_dssp CTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHTTTS-C--CCCEEEESGGGGCHHHHHHH
T ss_pred CcCCCCCCCCCCCCCEEEEeCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHhcC-C--cceEEEeCccccCHHHHHHH
Confidence 999999999999999999999999999999 99999999999999999998877 6 89999999999999999999
Q ss_pred hhhcCCeeeccCC
Q psy10531 551 ADVTGCNVLCPQE 563 (564)
Q Consensus 551 Adv~g~~v~~~~~ 563 (564)
||++|+||.+++.
T Consensus 414 Adv~g~pV~~~~~ 426 (497)
T 2zf5_O 414 ADILNRKVIRPVV 426 (497)
T ss_dssp HHHHTSCEEEESC
T ss_pred HhhcCCeEEEcCC
Confidence 9999999998753
No 14
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=4.3e-78 Score=661.68 Aligned_cols=415 Identities=17% Similarity=0.257 Sum_probs=370.3
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh----cCCCCCeEEEEEe
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK----DVNPAQIKGVGVD 76 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~----~~~~~~I~aIgis 76 (564)
|+|+||||+|||++|++++|.+|+++++.+++++..+|++||+||||++||+++++++++++. +++..+|.+|||+
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis 82 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGIT 82 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred ccEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEc
Confidence 678999999999999999999999999999999999999999999999999999999999873 4556789999999
Q ss_pred CC-CceEEEcCC-CCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChh
Q psy10531 77 AT-CSLVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDT 152 (564)
Q Consensus 77 ~q-~s~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe 152 (564)
+| +++++||++ |+|+ +|+|+|+|.|+.++++++.+. .++++++||+++++.++++||+|+++|+ |+
T Consensus 83 ~~~~~~~~~D~~~G~~l---------~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~ 152 (503)
T 2w40_A 83 NQRETVIIWDRITGKPL---------YNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNN-PE 152 (503)
T ss_dssp ECSSCEEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHHSCHHHHHHHHSSCCCSSSHHHHHHHHHHHC-HH
T ss_pred CCcceEEEEECCCCcCC---------ccceeecccCcHHHHHHHHhccchHHHHHHhCCCCCcccHHHHHHHHHHhC-hH
Confidence 98 999999998 9999 999999999999999999875 3579999999999999999999999999 99
Q ss_pred HHhhhcc----ccchhhHHHHhhhCC-ccccccccccccccccccCCCCHHHHHHcCCC-ccccccccccCCcccCCCcc
Q psy10531 153 CWRRAGL----FFDLPDFLTWKLTGD-ETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLG-DLKQNGWRAIGNTVKNPGQP 226 (564)
Q Consensus 153 ~~~~~~~----~l~~~dyl~~~LTG~-~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~-~~~~~~~~~Lpp~i~~~~~~ 226 (564)
+|+|+++ |++++|||.|+|||+ .++|.++++.+++||+++++||+++|+.+||+ +. .|| ++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~------~lP-~i~~~~~~ 225 (503)
T 2w40_A 153 IKQKIDDGTAVIGNINTWLIFNLTKGNCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMS------VLP-EIKSNCSN 225 (503)
T ss_dssp HHHHHHTTCEEEEEHHHHHHHHHHTSCCEEEHHHHTTTTCBCTTTCSBCHHHHHHTTCCCGG------GSC-EEECSEEE
T ss_pred HHHHHhcCCeEEECHHHHHHHHHcCCCccccHHHhhhhcCccCCCCccCHHHHHHcCCChHH------HCC-CccCCcCc
Confidence 9999998 999999999999994 88888888888899999999999999999999 63 454 89999999
Q ss_pred cCCCCCHHHHHHcCCCC--CCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccC-CCccCCCceec
Q psy10531 227 IGHGVSTEVARALGLNP--GTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSA-KKVQVPGVWGP 303 (564)
Q Consensus 227 ~G~~v~~~~a~~~Gl~~--g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~-~p~~~~~~~~~ 303 (564)
+| +++++ .+| + |+||++|++|++|+++|+|++. +|+ +++++|||+++.+.++ +|..++.....
T Consensus 226 ~G-~~~~~---~~g--~~~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~ 291 (503)
T 2w40_A 226 FG-LVKSE---HVP--DYLNIPITGCIGDQQSACIGQAIFD-EGE-------AKCTYGTGVFLLINTGEKVVYSTCGLIT 291 (503)
T ss_dssp EE-ECCCT---TSG--GGTTCEEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEECTTSCCCCSSSCEE
T ss_pred ee-eccHH---HcC--CCCCceEEEECchHHHHHHhCCCCC-CCc-------EEEEechhheeeeecCCccccCCCCcee
Confidence 99 89976 577 6 9999999999999999999988 898 9999999999998886 57665532222
Q ss_pred ccccccCC----eeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCC
Q psy10531 304 YYEVILPN----THLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHG 379 (564)
Q Consensus 304 ~~~~~~~~----~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 379 (564)
.+++..++ .|.++++++++|.+++|+++ +.. ...|+++++++++.+
T Consensus 292 ~~~~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~-------------~~~~~~l~~~a~~~~---------------- 341 (503)
T 2w40_A 292 TICYKFNDNDKPKYALEGSIGTAGSGVSWLLK-NKL-------------IDDPSEASDIMEKCE---------------- 341 (503)
T ss_dssp EEEECCSTTSCCEEEEEEEESCSHHHHHHHHH-TTS-------------SSCGGGHHHHHHHCC----------------
T ss_pred EEEeecCCCCCceEEEechhhhhHhHHHHHHH-hCC-------------cCCHHHHHHHHhhCC----------------
Confidence 23344455 89999999999999999999 642 123556666655432
Q ss_pred CCCCCCCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcc
Q psy10531 380 NRSPLADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHS 459 (564)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~ 459 (564)
T Consensus 342 -------------------------------------------------------------------------------- 341 (503)
T 2w40_A 342 -------------------------------------------------------------------------------- 341 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcceEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCC-CEEEEE
Q psy10531 460 TELTADFHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAI-STLLVS 537 (564)
Q Consensus 460 ~~~~~gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~-~~i~~~ 537 (564)
+++|++|+|||.|+|+|+||+++||+|+|++..|+++|+ +||++||++|.+|++++.|++ .|.+ + ++|+++
T Consensus 342 --~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~~g~~--~~~~i~~~ 414 (503)
T 2w40_A 342 --NTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHI---VRALLEGIAFQLNEIVDSLTSDMGIE--MLHVLRCD 414 (503)
T ss_dssp --SCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHTCS--CCSCEEEE
T ss_pred --CCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--ccceEEEe
Confidence 268999999999999999999999999999999999999 999999999999999999986 4777 7 899999
Q ss_pred cCCcccHHHHHHHhhhcCCeeeccCC
Q psy10531 538 GGLAKNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 538 GG~a~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
||++||++|+|++||++|+||.+++.
T Consensus 415 GG~a~s~~~~Q~~Adv~g~pV~~~~~ 440 (503)
T 2w40_A 415 GGMTKNKPFMQFNSDIINTKIEVSKY 440 (503)
T ss_dssp SGGGGCHHHHHHHHHHHTSCEEEESC
T ss_pred CccccCHHHHHHHHHHHCCeEEecCC
Confidence 99999999999999999999997753
No 15
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=7.7e-78 Score=658.41 Aligned_cols=415 Identities=23% Similarity=0.359 Sum_probs=367.5
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT 78 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q 78 (564)
|+|+||||+|||++|++++|.+|+++++.+++++..+|++||+||||++||+++++++++++. +++..+|.+|||++|
T Consensus 1 M~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~ 80 (495)
T 2dpn_A 1 MAFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITNQ 80 (495)
T ss_dssp --CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEEC
T ss_pred CcEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCC
Confidence 789999999999999999999999999999999988999999999999999999999999873 344568999999998
Q ss_pred -CceEEEcCC-CCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHH
Q psy10531 79 -CSLVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCW 154 (564)
Q Consensus 79 -~s~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~ 154 (564)
+++++||++ |+|+ +|+|+|+|.|+.++++++.+. .+.++++||+++++.++++||+|+++|+ |++|
T Consensus 81 ~~~~~~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~~~ 150 (495)
T 2dpn_A 81 RETTLLWDRKTGKPL---------HNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENV-PGLK 150 (495)
T ss_dssp SSCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSCTTSHHHHHHHHHHHS-SSHH
T ss_pred CccEEEEECCCCcCC---------ccceeecccChHHHHHHHHhccchhHHHHHhCCCCCchhHHHHHHHHHHcC-HHHH
Confidence 999999987 9999 999999999999999999875 3579999999999999999999999999 9999
Q ss_pred hhhcc----ccchhhHHHHhhhC--CccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccC
Q psy10531 155 RRAGL----FFDLPDFLTWKLTG--DETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIG 228 (564)
Q Consensus 155 ~~~~~----~l~~~dyl~~~LTG--~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G 228 (564)
+|+++ |++++|||.|+||| +.++|.++++.+++||+++++||+++|+.+||++. .| |+|+++++++|
T Consensus 151 ~~~~~~~~~~~~~~d~l~~~LTG~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~l-P~i~~~~~~~G 223 (495)
T 2dpn_A 151 ARAEGGGVAFGTVDTWLIWNLTGGKVHATDPTNASRTLLFNLHTLAWDPELLEALGIPAA------LL-PEVRPSDGDFG 223 (495)
T ss_dssp HHHHHTCEEEECHHHHHHHHHTTTSCCEECHHHHTTSSSEETTTTEECHHHHHHTTCCST------TC-CEECCTTSCCC
T ss_pred HHHhcCCcEEECHHHHHHHHhcCCCeEEEehHHhHhhcCccCccCCcCHHHHHHcCCCHH------HC-CCccCCCCeeE
Confidence 99998 99999999999999 78888888888889999999999999999999973 45 58999999999
Q ss_pred CCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccC-CCccCCCceeccccc
Q psy10531 229 HGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSA-KKVQVPGVWGPYYEV 307 (564)
Q Consensus 229 ~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~-~p~~~~~~~~~~~~~ 307 (564)
+++++ .+| +|+||++|++|++++++|+|++. +|+ +++++|||+++.+.++ +|..++....+.+++
T Consensus 224 -~~~~~---~~G--~g~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~ 289 (495)
T 2dpn_A 224 -ETLPE---LLG--APVPIRGVLGDQQAALFGQAALG-GGE-------GKCTYGTGAFLLLNTGKRPVLSEKGLLATVAW 289 (495)
T ss_dssp -BCCHH---HHS--SCCBEEEEEEHHHHHHHHTTCCS-TTC-------EEEEESSSEEEEEECTTSCCCCSSSCEEEEEE
T ss_pred -eccHH---HcC--CCCeEEEECcHHHHHHHhCCCCC-CCc-------EEEEccHhhhhhhhcCCccccCCCCceEEEEE
Confidence 89987 588 89999999999999999999988 898 9999999999988885 566554322122333
Q ss_pred ccCC--eeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCC
Q psy10531 308 ILPN--THLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLA 385 (564)
Q Consensus 308 ~~~~--~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 385 (564)
..++ .|.++++++++|..++|+++ +.. ...|+++++++++.+
T Consensus 290 ~~~~~~~~~~~g~~~~~g~~~~w~~~-~~~-------------~~~~~~l~~~a~~~~---------------------- 333 (495)
T 2dpn_A 290 SLGGRATYALEGSLFVAGAAVGWLKE-VGL-------------IRESAEVEALAASVE---------------------- 333 (495)
T ss_dssp EETTEEEEEEEEEESCSHHHHHHHHH-TTS-------------SSSTTTHHHHHHTCS----------------------
T ss_pred EcCCCCEEEEechHHhHHHHHHHHHH-cCC-------------ccCHHHHHHHHhhCC----------------------
Confidence 3444 79999999999999999999 642 112555665554332
Q ss_pred CCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcc
Q psy10531 386 DADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTAD 465 (564)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g 465 (564)
+++|
T Consensus 334 ----------------------------------------------------------------------------~~~g 337 (495)
T 2dpn_A 334 ----------------------------------------------------------------------------DTGD 337 (495)
T ss_dssp ----------------------------------------------------------------------------CCSS
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 2679
Q ss_pred eEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCCCEEEEEcCCcccH
Q psy10531 466 FHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAA-GKTPAISTLLVSGGLAKNP 544 (564)
Q Consensus 466 l~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~-g~~~~~~~i~~~GG~a~s~ 544 (564)
++|+|||.|+|+|+||+++||+|+|++..|+++|+ +||++||++|.+|++++.|++. |.+ +++|+++||++||+
T Consensus 338 l~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~--~~~i~~~GG~a~n~ 412 (495)
T 2dpn_A 338 VYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHL---ARAALEGVAFQVRDVVLAMEEEAGVR--LKVLKADGGMAQNR 412 (495)
T ss_dssp CEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCC--CCCEEEESGGGGCH
T ss_pred EEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--CcEEEEecccccCH
Confidence 99999999999999999999999999999999999 9999999999999999999874 767 88999999999999
Q ss_pred HHHHHHhhhcCCeeeccCC
Q psy10531 545 LYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 545 ~~~q~~Adv~g~~v~~~~~ 563 (564)
+|+|++||++|+||.+++.
T Consensus 413 ~~~q~~Adv~g~pV~~~~~ 431 (495)
T 2dpn_A 413 LFLKIQADLLGVPVAVPEV 431 (495)
T ss_dssp HHHHHHHHHHTSCEEEESC
T ss_pred HHHHHHHHHhCCeeEecCC
Confidence 9999999999999998753
No 16
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=1.2e-77 Score=657.97 Aligned_cols=415 Identities=21% Similarity=0.332 Sum_probs=367.4
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCC-
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDAT- 78 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q- 78 (564)
+|+||||+|||++|++++|.+|+++++.+++++..+|++||+||||++||+++++++++++. ++++.+|.+|||++|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis~~g 81 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQR 81 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECS
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEeCCC
Confidence 48999999999999999999999999999999999999999999999999999999999973 344568999999998
Q ss_pred CceEEEcCC-CCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhHHh
Q psy10531 79 CSLVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTCWR 155 (564)
Q Consensus 79 ~s~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~ 155 (564)
+++|+||++ |+|+ +|+|+|+|.|+.++++++.+. .++++++||+++++.++++||+|+++|+ |++|+
T Consensus 82 ~~~v~vD~~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~-p~~~~ 151 (504)
T 2d4w_A 82 ETAVVWDKTTGKPV---------YNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNV-EGARE 151 (504)
T ss_dssp SCBEEEETTTCCBS---------SCEECTTCCTTHHHHHHHHCSSCGGGGHHHHSCCSCTTSHHHHHHHHHHHS-TTHHH
T ss_pred CeEEEEECCCCCCc---------cccceecccChHHHHHHHHhhcchHHHHHHhCCCCCchhHHHHHHHHHHcC-hhHHH
Confidence 899999987 9999 999999999999999999873 4679999999999999999999999999 99999
Q ss_pred hhcc----ccchhhHHHHhhhC--C---ccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcc
Q psy10531 156 RAGL----FFDLPDFLTWKLTG--D---ETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQP 226 (564)
Q Consensus 156 ~~~~----~l~~~dyl~~~LTG--~---~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~ 226 (564)
|+++ |++++|||.|+||| + .++|.++++.+++||+++++||+++|+.+||++. .| |+|++++++
T Consensus 152 ~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~l-P~i~~~~~~ 224 (504)
T 2d4w_A 152 KAEKGDLLFGNTDTWVLWNMTGGTEGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLS------ML-PDIRSSSEV 224 (504)
T ss_dssp HHHHTCEEEECHHHHHHHHHTTTTTTCCCEEEHHHHTTTTCEETTTTEECHHHHHHTTCCGG------GS-CEEECSEEE
T ss_pred HHhcCCeEEecHHHHHHHHhcCCCcCCceeeehhhhhhhcCccCCCCccCHHHHHHhCCCHH------HC-CCccCCccc
Confidence 9998 99999999999999 6 7788888888889999999999999999999973 45 589999999
Q ss_pred cCCCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccC-CCccCCCceeccc
Q psy10531 227 IGHGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSA-KKVQVPGVWGPYY 305 (564)
Q Consensus 227 ~G~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~-~p~~~~~~~~~~~ 305 (564)
+| +++++ +.+| + +||++|++|++++++|+|++. +|+ +++++|||+++.+.++ +|..++....+.+
T Consensus 225 ~G-~~~~~--~~~G--~-~pV~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~ 290 (504)
T 2d4w_A 225 YG-HGRPR--GLVP--G-VPIAGILGDQQAATFGQACFE-VGQ-------AKNTYGTGNFLLLNTGTEKVMSKNGLLTTV 290 (504)
T ss_dssp EE-ECCTT--SSST--T-CEEEEEEEHHHHHHHHTTCCS-TTE-------EEEEESSSEEEEEECTTSCCCCSSSCEEEE
T ss_pred ee-ccchH--HhCC--C-CeEEEECCcHHHHHhhCCCCC-CCc-------EEEEcchhheeeeecCCccccCCCCcEEEE
Confidence 99 89975 3578 6 999999999999999999988 888 9999999999998885 5766653222223
Q ss_pred ccccCC---eeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCC
Q psy10531 306 EVILPN---THLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRS 382 (564)
Q Consensus 306 ~~~~~~---~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~ 382 (564)
++..++ .|.++++++++|.+++|+++.+.. ...|+++++++++.+
T Consensus 291 ~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~-------------~~~~~~l~~~a~~~~------------------- 338 (504)
T 2d4w_A 291 CYKIGDAPAVYALEGSIAVTGSLVQWLRDNLGM-------------FEDAPDVEWLAGKVQ------------------- 338 (504)
T ss_dssp EECCTTSCCEEEEEEEESCSHHHHHHHHHTTCT-------------TTTCSCTHHHHTTSS-------------------
T ss_pred EEEcCCCCceEEEcchhhhHHHHHHHHHHHhCC-------------CCCHHHHHHHHhhCC-------------------
Confidence 344455 899999999999999999997642 112444554443221
Q ss_pred CCCCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCccccc
Q psy10531 383 PLADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTEL 462 (564)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 462 (564)
+
T Consensus 339 -------------------------------------------------------------------------------~ 339 (504)
T 2d4w_A 339 -------------------------------------------------------------------------------D 339 (504)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------C
Confidence 3
Q ss_pred CcceEEeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCc
Q psy10531 463 TADFHVWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLA 541 (564)
Q Consensus 463 ~~gl~~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a 541 (564)
++|++|+|||.|+|+|+||+++||+|+|++..|+++|+ +||++||++|.+|++++.|++ .|.+ +++|+++||++
T Consensus 340 ~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~~g~~--~~~i~~~GG~a 414 (504)
T 2d4w_A 340 NGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHI---ARAALEATAFQSREVVDAMNADSGVD--LTELRVDGGMV 414 (504)
T ss_dssp CTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHSCC--CCEEEEESGGG
T ss_pred CCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC--cceEEEeCCcc
Confidence 68999999999999999999999999999999999999 999999999999999999976 4777 89999999999
Q ss_pred ccHHHHHHHhhhcCCeeeccCC
Q psy10531 542 KNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 542 ~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
||++|+||+||++|+||.+++.
T Consensus 415 ~s~~~~Qi~Adv~g~pV~~~~~ 436 (504)
T 2d4w_A 415 ANELLMQFQADQLGVDVVRPKV 436 (504)
T ss_dssp GCHHHHHHHHHHHTSCEEEESC
T ss_pred cCHHHHHHHHHHhCCeEEeCCC
Confidence 9999999999999999998753
No 17
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=4.8e-77 Score=657.76 Aligned_cols=413 Identities=12% Similarity=0.077 Sum_probs=359.9
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCC----CCcc-------ccCHH-HHHHHHHHHHHHHH-hcCCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPK----PQLY-------EQSSE-DIWNSVCLAIRDVT-KDVNP 67 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~----~g~~-------eqd~~-~~~~~i~~~l~~l~-~~~~~ 67 (564)
|+|+||||+||||+|++|||.+|+++++.+++|+.++|+ +||+ ||||+ .||+++..+++.+. .++++
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l~~~~~~~ 88 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMKASGFDF 88 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHHHHcCCCh
Confidence 679999999999999999999999999999999877774 6774 67887 46666666665554 35567
Q ss_pred CCeEEEEEeCC-CceEEEcCCCC--------------------ccccCCCCCCCCCcccccCcchHHHHHHHHhc---hh
Q psy10531 68 AQIKGVGVDAT-CSLVALDTNHQ--------------------PLTISPTGDDSRNVLLWMDHRAVSEADQINAT---KH 123 (564)
Q Consensus 68 ~~I~aIgis~q-~s~v~~D~~G~--------------------pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~---~~ 123 (564)
.+|++||||+| +++|+||++|+ |+ +|+|+|+|+|+.++++++++. .+
T Consensus 89 ~~I~aIgis~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl---------~~ai~W~D~R~~~~~~~l~~~~~~~~ 159 (538)
T 4bc3_A 89 SQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSI---------SDCPVWMDSSTTAQCRQLEAAVGGAQ 159 (538)
T ss_dssp GGEEEEEEEECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSC---------SEEECTTCCCCHHHHHHHHHHHTSHH
T ss_pred HHeEEEEecccceeEEEECCCccccccccccccchhhhccccccc---------cCCcccccCcHHHHHHHHHHhhCcHH
Confidence 89999999998 99999999975 77 999999999999999999875 36
Q ss_pred HHHHHhCCCCCCcChHHHHHHHHHhCChhHHhhhccccchhhHHHHhhhCCcc-ccccccccccccccccCCCCHHHHHH
Q psy10531 124 SVLDTVGGKISPEMETPKLLWLKKNLPDTCWRRAGLFFDLPDFLTWKLTGDET-QSLCSLVCKWTYDAYDRRWNEDYFEK 202 (564)
Q Consensus 124 ~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~~~~~~~~l~~~dyl~~~LTG~~~-~s~as~s~~~l~d~~~~~W~~ell~~ 202 (564)
+++++||+++++.++++||+|+++|+ |++|+|+++|++++|||.|+|||+.. +|.++++.+++||+++++||+++|+.
T Consensus 160 ~~~~~tG~~~~~~~~~~kl~wl~~~~-Pe~~~~~~~~~~~~d~l~~~LTG~~~~td~s~As~t~l~d~~~~~W~~~ll~~ 238 (538)
T 4bc3_A 160 ALSCLTGSRAYERFTGNQIAKIYQQN-PEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGA 238 (538)
T ss_dssp HHHHHHSSCCCTTSHHHHHHHHHHHC-HHHHHTEEEEEEHHHHHHHHHHTSCCCCBHHHHTTSSCEETTTTEECHHHHHH
T ss_pred HHHHHHCCCCccccHHHHHHHHHHcC-HHHHHHhheEEcHHHHHHHHHhCCCcccccchhhcccccccccCCCCHHHHHH
Confidence 79999999999999999999999999 99999999999999999999999987 78888888889999999999999999
Q ss_pred cCCC-ccccccccccCCcccCCCcccCCCCCHHHHHHcCCCCCCcEEeccchhHhhHhhhhccCCCCCCCcCCCcEEEEE
Q psy10531 203 IGLG-DLKQNGWRAIGNTVKNPGQPIGHGVSTEVARALGLNPGTPVSVSMIDAHAGALALLATSAPGIPEDIDSKLGLIC 281 (564)
Q Consensus 203 ~gi~-~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~a~~~Gl~~g~pV~~g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~ 281 (564)
+|++ .. +|| +++++++++| +|++++|+++||++|+||++|++|++++++|+ ++. ||+ +++++
T Consensus 239 ~gi~~~~------~LP-~i~~~~~~~G-~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~-~~~-~g~-------~~~s~ 301 (538)
T 4bc3_A 239 CAPHLEE------KLS-PPVPSCSVVG-AISSYYVQRYGFPPGCKVVAFTGDNPASLAGM-RLE-EGD-------IAVSL 301 (538)
T ss_dssp HCTTHHH------HHC-CCBCSSCEEE-ECCHHHHHHHCCCTTCEEECCEEHHHHHHHHT-TCC-TTC-------EEEEE
T ss_pred hCccHHH------HCC-Cccccccccc-ccCHHHHHHhCCCCCCeEEEecccHHhhhhcc-ccC-CCc-------EEEEe
Confidence 9998 42 575 7999999999 99999999999999999999999999999998 577 898 99999
Q ss_pred ccchhhhcccCCCccCCCceeccccccc-CCeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHh
Q psy10531 282 GTSTCHMALSAKKVQVPGVWGPYYEVIL-PNTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVID 360 (564)
Q Consensus 282 GTs~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 360 (564)
|||+++.+++++|..++... .+++.. ++.|..++.++++|.+++|+++.+. ...|++|+++++
T Consensus 302 GTs~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~--------------~~~~~~l~~~a~ 365 (538)
T 4bc3_A 302 GTSDTLFLWLQEPMPALEGH--IFCNPVDSQHYMALLCFKNGSLMREKIRNESV--------------SRSWSDFSKALQ 365 (538)
T ss_dssp SSSEEEEEEESSCCCCSSSE--EEEETTEEEEEEEEEEESSSHHHHHHHHHHHS--------------TTCHHHHHHHHH
T ss_pred ccchheEEecCCCCCCCCcc--eEEeecCCCCEEEeehhhccchHHHHHHHHhc--------------CCCHHHHHHHHh
Confidence 99999999999888776543 233333 4569999999999999999998753 235888888876
Q ss_pred hcccCCCCCceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhh
Q psy10531 361 TQHSTELTADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLV 440 (564)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~ 440 (564)
+.+
T Consensus 366 ~~~----------------------------------------------------------------------------- 368 (538)
T 4bc3_A 366 STE----------------------------------------------------------------------------- 368 (538)
T ss_dssp TSC-----------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 553
Q ss_pred hhhcCCcceeeCCCCCCcccccCcceEEeecccCCCCCCCCCCccccEe------cCCCCCChhhHHHHHHHHHHHHHHH
Q psy10531 441 ALDTNHQPLTISPTDTRHSTELTADFHVWPDFHGNRSPLADVDMKGMIC------GLTLDSSETSLVTLYLATIQALAYG 514 (564)
Q Consensus 441 a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P~~~G~r~P~~~~~~~g~~~------Gl~~~~~~~~~~~~~~A~~Egva~~ 514 (564)
++++|++|+|||+|+|+|+ ++|.|. |++. |+++|+ +||++||+||+
T Consensus 369 --------------------~g~~gl~~lp~~~Ger~P~----~~G~~~~~~~~~g~~~-~~~~~l---~RAvlEgia~~ 420 (538)
T 4bc3_A 369 --------------------MGNGGNLGFYFDVMEITPE----IIGRHRFNTENHKVAA-FPGDVE---VRALIEGQFMA 420 (538)
T ss_dssp --------------------TTGGGCEEEEESSCCSSSC----CCEEEEECTTSCEESC-CCHHHH---HHHHHHHHHHH
T ss_pred --------------------CCCCCeEEeecCCCCcCCC----CCceeeeccccccccC-CCHHHH---HHHHHHHHHHH
Confidence 1478999999999999997 345554 2332 799999 99999999999
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeeccCC
Q psy10531 515 TRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 515 ~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
+|++++.|++.+.+ +++|+++||++||++|+||+|||||+||.++..
T Consensus 421 ~r~~~~~l~~~g~~--~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 467 (538)
T 4bc3_A 421 KRIHAEGLGYRVMS--KTKILATGGASHNREILQVLADVFDAPVYVIDT 467 (538)
T ss_dssp HHHHHHHTTCCCCT--TCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCC
T ss_pred HHHHHHHhhhcCCC--CCeEEEEcchhcCHHHHHHHHHHhCCceEecCC
Confidence 99999999776766 889999999999999999999999999998753
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.3e-74 Score=628.40 Aligned_cols=401 Identities=15% Similarity=0.186 Sum_probs=337.6
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC-C
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT-C 79 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q-~ 79 (564)
|+|+||||+||||+|+++||.+|+++++.+++++. +|++||+||||++||+++++++++++ . .+|.+||||+| +
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~-~~~~g~~eqdp~~~~~~~~~~i~~~~-~---~~I~aIgis~~~~ 79 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIP-LEIDGIRRLDAPDTGRWLLDVLSRYA-D---HPVTTIVPVGHGA 79 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCC-EESSSCEECCHHHHHHHHHHHHHHTT-T---SCCCEEEEEECSS
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCc-ccCCCceeECHHHHHHHHHHHHHHHH-h---cCCCEEEEecCcC
Confidence 46999999999999999999999999999999986 68999999999999999999999986 2 58999999998 9
Q ss_pred ceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhchhHHHHHhCCCCCCc--ChHHHHHHHHHhCChhHHhhh
Q psy10531 80 SLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINATKHSVLDTVGGKISPE--METPKLLWLKKNLPDTCWRRA 157 (564)
Q Consensus 80 s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~~~~i~~~tG~~~~~~--~~~~kl~Wl~~~~~Pe~~~~~ 157 (564)
++|+|| +|+|| +|+|+|+|+|+.++++++.+... .|++||++++++ ++++||+|+++|+ ||+|+|+
T Consensus 80 ~~v~~D-~G~pl---------~~ai~w~D~R~~~~~~~l~~~~~-~~~~tG~~~~~~~~~~~~kl~Wl~~~~-Pe~~~~~ 147 (482)
T 3h6e_A 80 GIAALT-DGRLA---------FPPLDYEQSIPEAVMADYRSQRD-PFARTGSPALPDGLNIGSQLWWLDQLH-PDVMANA 147 (482)
T ss_dssp CEEEEE-TTEEC---------SCCBCTTSCCCHHHHHHHHTTCC-CHHHHCCCCCSTTSSHHHHHHHHHHHS-HHHHHSC
T ss_pred CEEEEC-CCCEe---------ccccccCCcccHHHHHHHHhhCh-HHHHhCCCCCCCchhHHHHHHHHHHcC-chhhhcC
Confidence 999999 99999 99999999999999999987533 389999999998 8999999999999 9999999
Q ss_pred ccccchhhHHHHhhhCCccccccc-cccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCCHHHH
Q psy10531 158 GLFFDLPDFLTWKLTGDETQSLCS-LVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVSTEVA 236 (564)
Q Consensus 158 ~~~l~~~dyl~~~LTG~~~~s~as-~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~~~~a 236 (564)
+ |++++|||.|+|||+.++|.++ ++.+++||+++++|+ ++|+.+||++ +|| +++++++++| ++++++|
T Consensus 148 ~-~l~~~dyl~~~LTG~~~td~s~~As~t~l~d~~~~~W~-~ll~~~gi~~-------~LP-~v~~~~~~~G-~l~~~~A 216 (482)
T 3h6e_A 148 T-LLPWAQYWAWFLTGRAVSEVTSLGCHSDLWDPQDGDFS-PMAKRLGWAA-------RFA-PIVRAGDTVG-ALLPAIA 216 (482)
T ss_dssp E-EEEHHHHHHHHTTSCCCEEHHHHTTTCSSEETTTTEEC-HHHHHTTCGG-------GBC-CEECTTSEEE-ECCHHHH
T ss_pred E-EEccHHHHHHHHhCCeeeecchhhhccCCccCCcCcHH-HHHHHcCCHH-------hCC-CCcCCCceee-eeCHHHH
Confidence 9 9999999999999999888776 566779999999999 5999999984 676 7999999999 9999999
Q ss_pred HHcCCCCCCcEEeccchhHhhHhh---hhccCCCCCCCcCCCcEEEEEccchhhhcccC---C-CccCC--Cceeccccc
Q psy10531 237 RALGLNPGTPVSVSMIDAHAGALA---LLATSAPGIPEDIDSKLGLICGTSTCHMALSA---K-KVQVP--GVWGPYYEV 307 (564)
Q Consensus 237 ~~~Gl~~g~pV~~g~~D~~aaa~g---~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~---~-p~~~~--~~~~~~~~~ 307 (564)
+++||++|+||++|++|++++++| +|+++ +|+ .+++++|||.++....+ + |..++ +.+.++
T Consensus 217 ~~~GL~~g~pV~~g~~D~~aa~lG~~g~g~~~-~g~------~~~~s~GT~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 286 (482)
T 3h6e_A 217 ERTGLSPDVQVLAGLHDSNAALLAARGFAEIA-DNE------ATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNV--- 286 (482)
T ss_dssp HHHTCCTTCEEECCEEHHHHHHHHHTTSTTTT-TSS------EEEEECSSSEEEEEECSSCCCGGGCCGGGTEEEEE---
T ss_pred HHhCCCCCCEEEEeCcHHHHHHhhhhccCCcC-CCC------EEEEECCceeEEEEecCccCCccccchhhceeecc---
Confidence 999999999999999999999999 99887 775 25889999987655555 4 33333 222211
Q ss_pred ccCCeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCC
Q psy10531 308 ILPNTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADA 387 (564)
Q Consensus 308 ~~~~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 387 (564)
....|..++...++|..++|+++......+ . ...+.++ +++..
T Consensus 287 -~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~--------~-~~~~~~~--~a~~~------------------------- 329 (482)
T 3h6e_A 287 -DVHGRPVPSARFMGGREIETLIEIDTRRVD--------I-KPDQPAL--LAAVP------------------------- 329 (482)
T ss_dssp -CTTSCEEEEEEECHHHHHHHHHCSGGGCTT--------C-GGGHHHH--HHTHH-------------------------
T ss_pred -ccccccccchhhhhHHHHHHHHHhcccccc--------c-ccchhhH--HHhcc-------------------------
Confidence 123456667778899999999754221000 0 0111111 11111
Q ss_pred CcccceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceE
Q psy10531 388 DMKGMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFH 467 (564)
Q Consensus 388 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~ 467 (564)
+++++|++
T Consensus 330 ------------------------------------------------------------------------~~g~~Gl~ 337 (482)
T 3h6e_A 330 ------------------------------------------------------------------------EVLRHGRM 337 (482)
T ss_dssp ------------------------------------------------------------------------HHHHTTCE
T ss_pred ------------------------------------------------------------------------ccCCCCeE
Confidence 12478999
Q ss_pred EeecccCCCCCCCCCCccccEecCCCCCChhhHHHHHHHHHHH--HHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHH
Q psy10531 468 VWPDFHGNRSPLADVDMKGMICGLTLDSSETSLVTLYLATIQA--LAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPL 545 (564)
Q Consensus 468 ~~P~~~G~r~P~~~~~~~g~~~Gl~~~~~~~~~~~~~~A~~Eg--va~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~ 545 (564)
|+|||+|+|+|+||+ ||+|+||+. +|+ +||++|+ ++|++|+++|.|++ .++|+++||++||++
T Consensus 338 flP~l~Ger~P~~d~--rG~~~Gl~~----~~l---~RA~lE~~Gia~~~r~~l~~~~~------~~~i~~~GG~a~s~~ 402 (482)
T 3h6e_A 338 ILPTLMRGFGPYPHG--RFAWINRPE----DWF---ERRAAACLYAALVADTALDLIGS------TGRILVEGRFAEADV 402 (482)
T ss_dssp EESCSSTTCSSCTTC--CCEEESCCS----SHH---HHHHHHHHHHHHHHHHHHHHTTC------CSEEEEESGGGGCHH
T ss_pred EecCCCCCCCCCCCC--ceEEeCCCH----HHH---HHHHHHHHhHHHHHHHHHHHhcC------CCeEEEeCCcccCHH
Confidence 999999999999987 999999998 799 9999995 99999999999864 468999999999999
Q ss_pred HHHHHhhh-cCCeeeccCC
Q psy10531 546 YVQTHADV-TGCNVLCPQE 563 (564)
Q Consensus 546 ~~q~~Adv-~g~~v~~~~~ 563 (564)
|+||+||| ||+||++++.
T Consensus 403 w~Qi~ADv~~g~pV~~~~~ 421 (482)
T 3h6e_A 403 FVRALASLRPDCAVYTANA 421 (482)
T ss_dssp HHHHHHHHSTTSEEEEESS
T ss_pred HHHHHhhhcCCCeEEEcCC
Confidence 99999999 9999998864
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=1.5e-68 Score=584.37 Aligned_cols=405 Identities=17% Similarity=0.181 Sum_probs=338.5
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeecc----ccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIA----LWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~----~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
|+++||||+||||+|++|+|.+|+++...+.++. ...|++||+|||+++||++++++++++.. ...+|.+||||
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~--~~~~i~~Igis 80 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCA--AGIAIDSIGID 80 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHH--TTCCCCEEEEE
T ss_pred cceEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHh--CCCCceEEEEe
Confidence 4689999999999999999999998887766553 34578999999999999999999999864 23579999999
Q ss_pred CC-CceEEEcCCCCccccCCCCCCCCCcccccCcchHHHHHHHHhc--hhHHHHHhCCCCCCcChHHHHHHHHHhCChhH
Q psy10531 77 AT-CSLVALDTNHQPLTISPTGDDSRNVLLWMDHRAVSEADQINAT--KHSVLDTVGGKISPEMETPKLLWLKKNLPDTC 153 (564)
Q Consensus 77 ~q-~s~v~~D~~G~pl~~~~~~~~~~p~i~W~D~Ra~~~~~~l~~~--~~~i~~~tG~~~~~~~~~~kl~Wl~~~~~Pe~ 153 (564)
+| +++++||++|+|+ +|+|+|+|.|+.++++++.+. .++++++||+++++.++++||+|+++|+ |++
T Consensus 81 ~q~~~~v~~D~~G~~l---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~-P~~ 150 (489)
T 2uyt_A 81 TWGVDFVLLDQQGQRV---------GLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQ-PEL 150 (489)
T ss_dssp ECSSCEEEECTTSCEE---------SCCBCTTCGGGTTHHHHHHHHHCHHHHHHHHCCCCCTTSHHHHHHHHHHHC-GGG
T ss_pred cCcccEEEECCCCCCc---------cCCccccCCccHHHHHHHHHhcCHHHHHHHhCCCCCCccHHHHHHHHHhcC-chH
Confidence 98 9999999999999 999999999999999999875 3579999999999999999999999999 999
Q ss_pred HhhhccccchhhHHHHhhhCCccccccccccccccccccCCCCHHHHHHcCCCccccccccccCCcccCCCcccCCCCCH
Q psy10531 154 WRRAGLFFDLPDFLTWKLTGDETQSLCSLVCKWTYDAYDRRWNEDYFEKIGLGDLKQNGWRAIGNTVKNPGQPIGHGVST 233 (564)
Q Consensus 154 ~~~~~~~l~~~dyl~~~LTG~~~~s~as~s~~~l~d~~~~~W~~ell~~~gi~~~~~~~~~~Lpp~i~~~~~~~G~~v~~ 233 (564)
|+|++++++++|||.|+|||+.++|.++++.+++||+++++||+++|+.+||++. .| |+++++++++| +++.
T Consensus 151 ~~~~~~~l~~~dyl~~~LTG~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~------~l-P~i~~~~~~~G-~~~~ 222 (489)
T 2uyt_A 151 IPHIAHALLMPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKA------WF-GRPTHPGNVIG-HWIC 222 (489)
T ss_dssp GGGCCEEEEHHHHHHHHHHSCCCCBHHHHGGGTCEETTTTEECHHHHHHHTCCGG------GS-CCCBCTTCEEE-EEEC
T ss_pred HHHhhhccCcHHHHHHHHhCCccceehhhhhhcccccCcCccCHHHHHHcCCCHH------HC-CCccCCCccee-eeec
Confidence 9999999999999999999999999888888899999999999999999999973 45 48999999999 7753
Q ss_pred HHHHHcCCCCCCcEEe-ccchhHhhHhhhhccCCCCCCCcCCCcEEEEEccchhhhcccCCCccCCC-cee-cccccccC
Q psy10531 234 EVARALGLNPGTPVSV-SMIDAHAGALALLATSAPGIPEDIDSKLGLICGTSTCHMALSAKKVQVPG-VWG-PYYEVILP 310 (564)
Q Consensus 234 ~~a~~~Gl~~g~pV~~-g~~D~~aaa~g~g~~~~~G~~~~~~~~~~~s~GTs~~~~~~~~~p~~~~~-~~~-~~~~~~~~ 310 (564)
+ +| +|+||++ |++|++|+++|+|+.. +|+ +++++|||+++...+++|..++. ... .+..+..+
T Consensus 223 ~----~~--~g~pV~~~g~~D~~aa~~g~g~~~-~g~-------~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (489)
T 2uyt_A 223 P----QG--NEIPVVAVASHDTASAVIASPLNG-SRA-------AYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAE 288 (489)
T ss_dssp T----TC--CEEEEECCCCBHHHHHHHHSCCCS-TTE-------EEEEESSSEEEEEEESSCCCSHHHHHHTCEEECCGG
T ss_pred c----cC--CCCcEEEECchHHHHHHhcCCCCC-CCc-------EEEEEchHhhcccccCCCccCHHHHhhcceeecCCC
Confidence 2 23 7899997 8899999999999887 777 99999999999888888765532 211 12223457
Q ss_pred CeeEeccccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcc
Q psy10531 311 NTHLLESGQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMK 390 (564)
Q Consensus 311 ~~~~~~~~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 390 (564)
+.|..++.+.+ .|+++.+. +.++ .+.|+++.+.+ +.+
T Consensus 289 ~~~~~~~~~~g-----~W~~~~~~------~~~~----~~~~~~l~~~a-~~~--------------------------- 325 (489)
T 2uyt_A 289 GRYRVLKNIMG-----LWLLQRVL------QERQ----INDLPALIAAT-QAL--------------------------- 325 (489)
T ss_dssp GCEEEEEEECT-----THHHHHHH------HHTT----CCCHHHHHHHH-TTS---------------------------
T ss_pred CeEEEehhHhH-----HHHHHHhh------cccc----hhhHHHHHHHh-ccC---------------------------
Confidence 88888877653 48776532 1111 12355554332 111
Q ss_pred cceeccCCCCCchhHHHHHHHHHHHHHhhhcccCccEEeccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEee
Q psy10531 391 GMICGLTLDSSETSLVTLYLATIQALADVTKDVNPAQIKGVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVWP 470 (564)
Q Consensus 391 ~~~~~~~~~~~~~~l~~~~~~~i~~l~~~~~~~~~~~~~ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~P 470 (564)
++++ .+|+|
T Consensus 326 ----------------------------------------------------------------------~~~~-~l~~p 334 (489)
T 2uyt_A 326 ----------------------------------------------------------------------PACR-FIINP 334 (489)
T ss_dssp ----------------------------------------------------------------------CSSS-SCCCT
T ss_pred ----------------------------------------------------------------------CCcC-eeECC
Confidence 1234 44778
Q ss_pred cccCCCCCCCCCC-----ccccEecCC--CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCcc
Q psy10531 471 DFHGNRSPLADVD-----MKGMICGLT--LDSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLAK 542 (564)
Q Consensus 471 ~~~G~r~P~~~~~-----~~g~~~Gl~--~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a~ 542 (564)
++.|+++|+ .+|.+.|+. ..|+++|+ +||++||++|++|+++|.|++ .|.+ +++|+++||++|
T Consensus 335 ----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~--~~~i~~~GGgak 405 (489)
T 2uyt_A 335 ----NDDRFINPDEMCSEIQAACREMAQPIPESDAEL---ARCIFDSLALLYADVLHELAQLRGED--FSQLHIVGGGCQ 405 (489)
T ss_dssp ----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHH---HHHHHHHHHHHHHHHHHHHHHHHTCC--CSEEEEESGGGG
T ss_pred ----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCC--CCEEEEeCChhh
Confidence 678888887 589999984 78999999 999999999999999999987 5777 899999999999
Q ss_pred cHHHHHHHhhhcCCeeeccC
Q psy10531 543 NPLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 543 s~~~~q~~Adv~g~~v~~~~ 562 (564)
|++|+||+||+||+||.++.
T Consensus 406 s~~~~Qi~ADvlg~pV~~~~ 425 (489)
T 2uyt_A 406 NTLLNQLCADACGIRVIAGP 425 (489)
T ss_dssp CHHHHHHHHHHHTSEEEECC
T ss_pred hHHHHHHHHHHHCCeeecCC
Confidence 99999999999999998765
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.38 E-value=4.8e-12 Score=126.99 Aligned_cols=82 Identities=9% Similarity=0.067 Sum_probs=65.1
Q ss_pred eecccCCCCCCCCCCccccEecCC-CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHH
Q psy10531 469 WPDFHGNRSPLADVDMKGMICGLT-LDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYV 547 (564)
Q Consensus 469 ~P~~~G~r~P~~~~~~~g~~~Gl~-~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~ 547 (564)
.|+..|.|++. -+++.++++. ..|+++|+ +||++|+++|.+. +.++..+. .++|+++||+++|+.|+
T Consensus 158 ~p~~~~~~c~v---fa~s~v~~l~~~g~~~~di---~~av~e~Va~~i~---~~~~~~~~---~~~i~~~GG~a~n~~~~ 225 (270)
T 1hux_A 158 KRVAISSTCTV---FAESEVISQLSKGTDKIDI---IAGIHRSVASRVI---GLANRVGI---VKDVVMTGGVAQNYGVR 225 (270)
T ss_dssp SCCCCCCCSHH---HHHHHHHHHHHTTCCHHHH---HHHHHHHHHHHHH---HHHHTTCC---CSSEEEESGGGGCHHHH
T ss_pred CCCCcccccch---hHhHHHHHHhhCCCCHHHH---HHHHHHHHHHHHH---HHHhcCCC---CCeEEEeCccccCHHHH
Confidence 35556677662 3677777776 67899999 8899999999984 44444332 36799999999999999
Q ss_pred HHHhhhcCCeeeccC
Q psy10531 548 QTHADVTGCNVLCPQ 562 (564)
Q Consensus 548 q~~Adv~g~~v~~~~ 562 (564)
|+++|++|+||.+++
T Consensus 226 ~~~~~~lg~~v~~p~ 240 (270)
T 1hux_A 226 GALEEGLGVEIKTSP 240 (270)
T ss_dssp HHHHHHHCSCEECCG
T ss_pred HHHHHHHCCCeEeCC
Confidence 999999999999875
No 21
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.83 E-value=4.6e-09 Score=114.53 Aligned_cols=82 Identities=17% Similarity=0.233 Sum_probs=73.1
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHH--------HHHHHHHHHHHhhhcc-cCccEEeccccch--hhh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLV--------TLYLATIQALADVTKD-VNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~~ 438 (564)
++.|+|+|.|+|+|++|++++|.|+|++..|+..+++ ..++.+++.+.+.+|. +++|+++|||++| |||
T Consensus 342 gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Q 421 (506)
T 3h3n_X 342 EVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQ 421 (506)
T ss_dssp CCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHH
T ss_pred ceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHHHH
Confidence 4678999999999999999999999999999955554 4568888999888887 9999999999999 999
Q ss_pred hhhhhcCCcceeeC
Q psy10531 439 LVALDTNHQPLTIS 452 (564)
Q Consensus 439 ~~a~~~~~~~~~~~ 452 (564)
++||.+| +||.+.
T Consensus 422 i~ADv~g-~pV~~~ 434 (506)
T 3h3n_X 422 FQADILD-IDVQRA 434 (506)
T ss_dssp HHHHHHT-SEEEEC
T ss_pred HHHHHhC-CeEEec
Confidence 9999999 898764
No 22
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.82 E-value=4.4e-09 Score=114.57 Aligned_cols=82 Identities=21% Similarity=0.277 Sum_probs=72.6
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHH--------HHHHHHHHHHHhhhcc-cCccEEeccccch--hhh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLV--------TLYLATIQALADVTKD-VNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~~ 438 (564)
++.|+|+|.|+|+|++|++++|.|+|++..|+..+++ ..++.+++.+.+.+|. +++|+++|||++| |||
T Consensus 343 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Q 422 (501)
T 3g25_A 343 GVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQ 422 (501)
T ss_dssp TCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHH
T ss_pred eEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHH
Confidence 3678999999999999999999999999999955554 4568888999888887 9999999999999 999
Q ss_pred hhhhhcCCcceeeC
Q psy10531 439 LVALDTNHQPLTIS 452 (564)
Q Consensus 439 ~~a~~~~~~~~~~~ 452 (564)
++||.+| +||.+.
T Consensus 423 i~Adv~g-~pV~~~ 435 (501)
T 3g25_A 423 FQADIVN-TSVERP 435 (501)
T ss_dssp HHHHHHT-SEEEEE
T ss_pred HHHHHhC-CceEec
Confidence 9999999 888654
No 23
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.82 E-value=4.7e-09 Score=114.80 Aligned_cols=82 Identities=18% Similarity=0.260 Sum_probs=69.5
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhh---hcccCccEEeccccch--h
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADV---TKDVNPAQIKGVGVDA--T 436 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~---~~~~~~~~~~ggg~~~--~ 436 (564)
++.|+|+|.|+|+|+||++++|.|+|++..|+..++++ .++.+++.+.+. +|++++|+++|||++| |
T Consensus 362 gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g~~~~i~~~GGgaks~~~ 441 (520)
T 4e1j_A 362 EVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLEAMHKDWRRNGNDTVLRVDGGMVASDWT 441 (520)
T ss_dssp CCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEESGGGGCHHH
T ss_pred cEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcceEEEeCccccCHHH
Confidence 36789999999999999999999999999999555554 557888888887 6789999999999999 9
Q ss_pred hhhhhhhcCCcceeeC
Q psy10531 437 CSLVALDTNHQPLTIS 452 (564)
Q Consensus 437 ~~~~a~~~~~~~~~~~ 452 (564)
||++||.+| +||.+.
T Consensus 442 ~Qi~ADvlg-~pV~~~ 456 (520)
T 4e1j_A 442 MQRLSDLLD-APVDRP 456 (520)
T ss_dssp HHHHHHHHT-SCEEEE
T ss_pred HHHHHHHhC-CeEEec
Confidence 999999999 888764
No 24
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.81 E-value=4.6e-09 Score=115.07 Aligned_cols=83 Identities=17% Similarity=0.206 Sum_probs=74.9
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcc-cCccEEeccccch--hh
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKD-VNPAQIKGVGVDA--TC 437 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~ 437 (564)
.++.|+|+|.|+|+|++|++++|.|+|++..++..++++ .++.+++.+...+|. +++|+++|||++| ||
T Consensus 340 ~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~~~ 419 (526)
T 3ezw_A 340 NGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM 419 (526)
T ss_dssp TTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHH
T ss_pred CCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHHHH
Confidence 678999999999999999999999999999999666665 447788888888897 9999999999999 99
Q ss_pred hhhhhhcCCcceeeC
Q psy10531 438 SLVALDTNHQPLTIS 452 (564)
Q Consensus 438 ~~~a~~~~~~~~~~~ 452 (564)
|++||.+| +||.+.
T Consensus 420 Qi~ADvlg-~pV~~~ 433 (526)
T 3ezw_A 420 QFQSDILG-TRVERP 433 (526)
T ss_dssp HHHHHHHT-SEEEEE
T ss_pred HHHHHHHC-CEEEeC
Confidence 99999999 888754
No 25
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.81 E-value=5.2e-09 Score=114.23 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=74.7
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHH--------HHHHHHHHHHHhhhcc-cCccEEeccccch--hhh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLV--------TLYLATIQALADVTKD-VNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~~ 438 (564)
++.|+|+|.|+|+|+||++++|.|+|++..|+..+++ ..++.+++.+.+.+|. +++|+++|||++| |||
T Consensus 340 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Q 419 (510)
T 2p3r_A 340 GVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQ 419 (510)
T ss_dssp TCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHH
T ss_pred ceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHH
Confidence 3678999999999999999999999999999955554 4568888999888887 9999999999999 999
Q ss_pred hhhhhcCCcceeeC-CCCC
Q psy10531 439 LVALDTNHQPLTIS-PTDT 456 (564)
Q Consensus 439 ~~a~~~~~~~~~~~-~~~~ 456 (564)
++||.+| +||.+. +.|+
T Consensus 420 i~ADv~g-~pV~~~~~~e~ 437 (510)
T 2p3r_A 420 FQSDILG-TRVERPEVREV 437 (510)
T ss_dssp HHHHHHT-SEEEEESCCCH
T ss_pred HHHHHhC-CceEecCCCCc
Confidence 9999999 898754 4443
No 26
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.76 E-value=7.7e-09 Score=112.82 Aligned_cols=83 Identities=18% Similarity=0.295 Sum_probs=69.9
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcc-cCccEEeccccch--hh
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKD-VNPAQIKGVGVDA--TC 437 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~ 437 (564)
.++.|+|+|.|+|+|+++++++|.|+|++..++..++++ .++.+++.+.+. |. +++|+++|||++| ||
T Consensus 339 ~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~-g~~~~~i~~~GGga~s~~~~ 417 (508)
T 3ifr_A 339 DGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDI-GHAPQRFFASDGGTRSRVWM 417 (508)
T ss_dssp GGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCEEEEESGGGGCHHHH
T ss_pred CCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEeCCcccCHHHH
Confidence 578899999999999999999999999999999555544 557888888876 65 9999999999999 99
Q ss_pred hhhhhhcCCcceeeCC
Q psy10531 438 SLVALDTNHQPLTISP 453 (564)
Q Consensus 438 ~~~a~~~~~~~~~~~~ 453 (564)
|++||.+| +||.+++
T Consensus 418 Qi~ADv~g-~pV~~~~ 432 (508)
T 3ifr_A 418 GIMADVLQ-RPVQLLA 432 (508)
T ss_dssp HHHHHHHT-SCEEEEE
T ss_pred HHHHHHhC-CeEEecC
Confidence 99999999 9998876
No 27
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.76 E-value=8.3e-09 Score=113.76 Aligned_cols=83 Identities=28% Similarity=0.483 Sum_probs=71.6
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHHHHH-----------HHHHHHHhhhcc-cCccEEeccccch-
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVTLYL-----------ATIQALADVTKD-VNPAQIKGVGVDA- 435 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~i~~l~~~~~~-~~~~~~~ggg~~~- 435 (564)
.++.|+|+|.|+|+|+||++++|.|+|++..|+..++++.|. .+++.+.+ .|. +++|+++|||++|
T Consensus 378 ~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~-~g~~~~~i~~~GG~aks~ 456 (554)
T 3l0q_A 378 NDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQ-NGYNIDTMMASGGGTKNP 456 (554)
T ss_dssp TTCCEECCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCCEEEEESGGGGCH
T ss_pred CceEEcccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccCH
Confidence 678999999999999999999999999999999999965444 44455544 355 8999999999999
Q ss_pred -hhhhhhhhcCCcceeeCC
Q psy10531 436 -TCSLVALDTNHQPLTISP 453 (564)
Q Consensus 436 -~~~~~a~~~~~~~~~~~~ 453 (564)
|||++||.+| +||.+..
T Consensus 457 ~~~Qi~ADv~g-~pV~~~~ 474 (554)
T 3l0q_A 457 IFVQEHANATG-CAMLLPE 474 (554)
T ss_dssp HHHHHHHHHHC-CEEEEES
T ss_pred HHHHHHHHhhC-CeEEecC
Confidence 9999999999 8988753
No 28
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.74 E-value=1.1e-08 Score=111.35 Aligned_cols=86 Identities=21% Similarity=0.240 Sum_probs=75.3
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHH--------HHHHHHHHHHHhhhcccCccEEeccccch--hhh
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLV--------TLYLATIQALADVTKDVNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~i~~l~~~~~~~~~~~~~ggg~~~--~~~ 438 (564)
.++.|+|+|.|+|+|+++++++|.|+|++..++..+++ ..++.+++.+.+..+++++|+++|||++| |||
T Consensus 332 ~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Q 411 (504)
T 3ll3_A 332 RNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQ 411 (504)
T ss_dssp GGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHH
T ss_pred CCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHH
Confidence 57899999999999999999999999999999955554 45678888888876679999999999999 999
Q ss_pred hhhhhcCCcceeeC-CCC
Q psy10531 439 LVALDTNHQPLTIS-PTD 455 (564)
Q Consensus 439 ~~a~~~~~~~~~~~-~~~ 455 (564)
++||.+| +||.++ +.|
T Consensus 412 i~ADv~g-~pV~~~~~~e 428 (504)
T 3ll3_A 412 LCANIFN-VPIVTMKEQQ 428 (504)
T ss_dssp HHHHHHT-SCEEEESCSC
T ss_pred HHHHhhC-CeEEecCCCC
Confidence 9999999 898875 444
No 29
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=98.72 E-value=1.1e-08 Score=113.35 Aligned_cols=82 Identities=22% Similarity=0.248 Sum_probs=72.7
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcc-cCccEEecccc-ch--h
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKD-VNPAQIKGVGV-DA--T 436 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~-~~~~~~~ggg~-~~--~ 436 (564)
.++.|+|+|.|+|+|++|++|+|.|+|++..|+..++++ .++.+++.+.+ +|. +++|+++|||+ +| |
T Consensus 378 ~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga~ks~~~ 456 (572)
T 3jvp_A 378 SGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAFHG-RGVEVHELYACGGLPQKNHLL 456 (572)
T ss_dssp SCCEEECCTTCCCTTTCCSSCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCEEEEEEESSHHHHCHHH
T ss_pred CCeEeCCccCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcCEEEEEcCchhhCHHH
Confidence 678999999999999999999999999999999555555 55778888887 566 99999999999 99 9
Q ss_pred hhhhhhhcCCcceeeC
Q psy10531 437 CSLVALDTNHQPLTIS 452 (564)
Q Consensus 437 ~~~~a~~~~~~~~~~~ 452 (564)
||++||.+| +||.+.
T Consensus 457 ~Qi~ADv~g-~pV~~~ 471 (572)
T 3jvp_A 457 MQIFADVTN-REIKVA 471 (572)
T ss_dssp HHHHHHHHT-SCEEEB
T ss_pred HHHHHHHHC-CeeEec
Confidence 999999999 898755
No 30
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.69 E-value=2.2e-08 Score=109.10 Aligned_cols=82 Identities=16% Similarity=0.164 Sum_probs=72.4
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcc-cCccEEeccccch--hhh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKD-VNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~~ 438 (564)
++.|+|++.|+|+|+++++++|.|+|++..++..++++ .++.+++.+.+.+|. +++|+++|||++| |||
T Consensus 342 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~s~~~~Q 421 (504)
T 2d4w_A 342 GAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQ 421 (504)
T ss_dssp TCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGGGGCHHHHH
T ss_pred CEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCcccCHHHHH
Confidence 35688999999999999999999999999999555554 557888888887887 9999999999999 999
Q ss_pred hhhhhcCCcceeeC
Q psy10531 439 LVALDTNHQPLTIS 452 (564)
Q Consensus 439 ~~a~~~~~~~~~~~ 452 (564)
++||.+| +||.+.
T Consensus 422 i~Adv~g-~pV~~~ 434 (504)
T 2d4w_A 422 FQADQLG-VDVVRP 434 (504)
T ss_dssp HHHHHHT-SCEEEE
T ss_pred HHHHHhC-CeEEeC
Confidence 9999999 888855
No 31
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.67 E-value=2.8e-08 Score=108.08 Aligned_cols=82 Identities=18% Similarity=0.213 Sum_probs=72.2
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchh--------HHHHHHHHHHHHHhhhcc-cCccEEeccccch--hhh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETS--------LVTLYLATIQALADVTKD-VNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~~ 438 (564)
++.|+|++.|+|+|+++++++|.|+|++..++..+ ++..++.+++.+.+.+|. +++|+++|||++| |||
T Consensus 337 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q 416 (495)
T 2dpn_A 337 DVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLK 416 (495)
T ss_dssp SCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHH
T ss_pred cEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHH
Confidence 35788999999999999999999999999999544 445668888888887787 8999999999999 999
Q ss_pred hhhhhcCCcceeeC
Q psy10531 439 LVALDTNHQPLTIS 452 (564)
Q Consensus 439 ~~a~~~~~~~~~~~ 452 (564)
++||.+| +||.+.
T Consensus 417 ~~Adv~g-~pV~~~ 429 (495)
T 2dpn_A 417 IQADLLG-VPVAVP 429 (495)
T ss_dssp HHHHHHT-SCEEEE
T ss_pred HHHHHhC-CeeEec
Confidence 9999999 888755
No 32
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.63 E-value=4.1e-08 Score=106.97 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=71.8
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcc-c-CccEEeccccch--hh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKD-V-NPAQIKGVGVDA--TC 437 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~-~-~~~~~~ggg~~~--~~ 437 (564)
++.|+|++.|+|+|+++++++|.|+|++..++..++++ .++.+++.+.+.+|. + ++|+++|||++| ||
T Consensus 345 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~GG~a~s~~~~ 424 (503)
T 2w40_A 345 GVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFM 424 (503)
T ss_dssp TCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGGGGCHHHH
T ss_pred CEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeCccccCHHHH
Confidence 35788999999999999999999999999999555544 567888888877786 8 999999999999 99
Q ss_pred hhhhhhcCCcceeeC
Q psy10531 438 SLVALDTNHQPLTIS 452 (564)
Q Consensus 438 ~~~a~~~~~~~~~~~ 452 (564)
|++||.+| +||.+.
T Consensus 425 Q~~Adv~g-~pV~~~ 438 (503)
T 2w40_A 425 QFNSDIIN-TKIEVS 438 (503)
T ss_dssp HHHHHHHT-SCEEEE
T ss_pred HHHHHHHC-CeEEec
Confidence 99999999 888754
No 33
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.63 E-value=5.3e-08 Score=106.28 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=71.1
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHH--------HHHHHHHHHHHhhhcccCccEEeccccch--hhh
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLV--------TLYLATIQALADVTKDVNPAQIKGVGVDA--TCS 438 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~~~~~~i~~l~~~~~~~~~~~~~ggg~~~--~~~ 438 (564)
.++.|+|+|.|+|+|+++++++|.|+|++..++..+++ ..++.+++.+.+ |.+++|+++|||++| |||
T Consensus 343 ~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~~l~~--g~~~~i~~~GGga~s~~~~Q 420 (511)
T 3hz6_A 343 DGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELLGM--EKVGLLKVVGGGARSEAWLR 420 (511)
T ss_dssp TTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTG--GGCCEEEEESGGGGCHHHHH
T ss_pred CCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCchhcCHHHHH
Confidence 67899999999999999999999999999999955554 455778888877 449999999999999 999
Q ss_pred hhhhhcCCcce-eeC
Q psy10531 439 LVALDTNHQPL-TIS 452 (564)
Q Consensus 439 ~~a~~~~~~~~-~~~ 452 (564)
++||.+| +|| .+.
T Consensus 421 i~ADv~g-~pV~~~~ 434 (511)
T 3hz6_A 421 MIADNLN-VSLLVKP 434 (511)
T ss_dssp HHHHHHT-CEEEECC
T ss_pred HHHHHHC-CeeEEec
Confidence 9999999 998 653
No 34
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=98.60 E-value=3e-08 Score=107.49 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=65.8
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcc-cCccEEeccccch--hh
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKD-VNPAQIKGVGVDA--TC 437 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~ 437 (564)
.++.|+|+|.|+|+|+++++++|.|+|++..++..++++ .++.+++.+.+. |. +++|+++|||++| ||
T Consensus 325 ~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~~-g~~~~~i~~~GG~a~s~~~~ 403 (484)
T 2itm_A 325 EPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHAC-GIKPQSVTLIGGGARSEYWR 403 (484)
T ss_dssp CCCEEEEEEC--------CCEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHTT-TCCCSCEEEESGGGCCHHHH
T ss_pred CCeEEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcceEEEEeccccCHHHH
Confidence 678899999999999999999999999999999555554 557778888764 55 9999999999999 99
Q ss_pred hhhhhhcCCcceeeCCCC
Q psy10531 438 SLVALDTNHQPLTISPTD 455 (564)
Q Consensus 438 ~~~a~~~~~~~~~~~~~~ 455 (564)
|++||.+| +||.+++.+
T Consensus 404 Qi~Adv~g-~pV~~~~~~ 420 (484)
T 2itm_A 404 QMLADISG-QQLDYRTGG 420 (484)
T ss_dssp HHHHHHHC-CCEEEESCT
T ss_pred HHHHHHhC-CeEEeCCCC
Confidence 99999999 899887644
No 35
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.59 E-value=5.7e-08 Score=105.67 Aligned_cols=82 Identities=17% Similarity=0.242 Sum_probs=70.9
Q ss_pred ceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHH--------HHHHHHHHHHhhhcccCccEEeccccch--hhhh
Q psy10531 370 DFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVT--------LYLATIQALADVTKDVNPAQIKGVGVDA--TCSL 439 (564)
Q Consensus 370 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~i~~l~~~~~~~~~~~~~ggg~~~--~~~~ 439 (564)
++.|+|++.|+|+|+++++++|.|+|++..++..++++ .++.+++.+.+.. ++++|+++|||++| |||+
T Consensus 334 gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi 412 (497)
T 2zf5_O 334 GVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQF 412 (497)
T ss_dssp TCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHH
T ss_pred ceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHH
Confidence 35688999999999999999999999999999555554 5577788887766 88999999999999 9999
Q ss_pred hhhhcCCcceeeCC
Q psy10531 440 VALDTNHQPLTISP 453 (564)
Q Consensus 440 ~a~~~~~~~~~~~~ 453 (564)
+||.+| +||.+..
T Consensus 413 ~Adv~g-~pV~~~~ 425 (497)
T 2zf5_O 413 QADILN-RKVIRPV 425 (497)
T ss_dssp HHHHHT-SCEEEES
T ss_pred HHhhcC-CeEEEcC
Confidence 999999 8888553
No 36
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=98.50 E-value=2e-07 Score=101.80 Aligned_cols=84 Identities=15% Similarity=0.263 Sum_probs=71.7
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCC-CchhH--------HHHHHHHHHHHHhhhcc-cCccEEeccccch--h
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDS-SETSL--------VTLYLATIQALADVTKD-VNPAQIKGVGVDA--T 436 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l--------~~~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~ 436 (564)
.++.|+|++.|+|+|++ ++++|.|+|++..+ +..++ +..++.+++.+.+ +|. +++|+++|||++| |
T Consensus 363 ~gl~~lP~~~Ger~P~~-~~arg~~~Gl~~~~~~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~~~~i~~~GGgaks~~~ 440 (515)
T 3i8b_A 363 NGITLVPYFDGERTPNR-PNATATFSGMTLANTTRENLARAFVEGLLCSQRDCLELIRS-LGASITRILLIGGGAKSEAI 440 (515)
T ss_dssp GGCEEECCTTCBTTTTB-TTCCCEEESCCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCEEEEESGGGGCHHH
T ss_pred CCeEEecCCCCCcCCCC-cCcceEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEECchhcCHHH
Confidence 57889999999999977 99999999999999 85544 4456788888887 566 9999999999999 9
Q ss_pred hhhhhhhcCCcceeeC-CCC
Q psy10531 437 CSLVALDTNHQPLTIS-PTD 455 (564)
Q Consensus 437 ~~~~a~~~~~~~~~~~-~~~ 455 (564)
||++||.+| +||.+. +.|
T Consensus 441 ~Qi~ADvlg-~pV~~~~~~e 459 (515)
T 3i8b_A 441 RTLAPSILG-MDVTRPATDE 459 (515)
T ss_dssp HHHHHHHHT-SCEEEECCCC
T ss_pred HHHHHHHhC-CceEecCCcc
Confidence 999999999 888874 434
No 37
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.21 E-value=3.9e-06 Score=85.78 Aligned_cols=89 Identities=19% Similarity=0.367 Sum_probs=67.5
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCc
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCS 80 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s 80 (564)
|+|+||||+|+|++|++++|.+|+++.+.+.++ +++++++++.+.+.++++... .+|.+|||+..
T Consensus 1 M~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~---~~i~gigi~~p-- 65 (321)
T 3vgl_A 1 MGLTIGVDIGGTKIAAGVVDEEGRILSTFKVAT----------PPTAEGIVDAICAAVAGASEG---HDVEAVGIGAA-- 65 (321)
T ss_dssp -CEEEEEEECSSEEEEEEECTTCCBCCCEEEEC----------CSSHHHHHHHHHHHHHHHHTT---CCEEEEEEEES--
T ss_pred CcEEEEEEECCCEEEEEEECCCCCEEEEEEeeC----------CCCHHHHHHHHHHHHHHHHhh---cCceEEEEecc--
Confidence 889999999999999999999999998877665 257899999999999998743 47999999533
Q ss_pred eEEEcCC-CCccccCCCCCCCCCcccccCcchHH
Q psy10531 81 LVALDTN-HQPLTISPTGDDSRNVLLWMDHRAVS 113 (564)
Q Consensus 81 ~v~~D~~-G~pl~~~~~~~~~~p~i~W~D~Ra~~ 113 (564)
-++|.+ |..+. .|.+-|.+..-.+
T Consensus 66 -G~vd~~~g~v~~--------~~~l~w~~~~l~~ 90 (321)
T 3vgl_A 66 -GYVDDKRATVLF--------APNIDWRHEPLKD 90 (321)
T ss_dssp -SEECTTSSCEEE--------CSSSCCEEECHHH
T ss_pred -ccEeCCCCEEEe--------CCCCCCcCCCHHH
Confidence 256754 54441 4556787654333
No 38
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.10 E-value=8.4e-06 Score=83.12 Aligned_cols=89 Identities=17% Similarity=0.311 Sum_probs=66.4
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDATC 79 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q~ 79 (564)
.|+||||+|+|++|++++|.+|+++.+.+.+++. +++++++++.+.+.+++++. +.+..+|.+|||+..
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~p- 76 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNI--------LEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTP- 76 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCC--------TTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEES-
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEcCCC--------CCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEecc-
Confidence 5999999999999999999999999988777653 35677899999999999873 333457999998543
Q ss_pred ceEEEcC-CCCccccCCCCCCCCCcccccCc
Q psy10531 80 SLVALDT-NHQPLTISPTGDDSRNVLLWMDH 109 (564)
Q Consensus 80 s~v~~D~-~G~pl~~~~~~~~~~p~i~W~D~ 109 (564)
.++|. +|..+. .|.+-|.+.
T Consensus 77 --G~vd~~~g~v~~--------~~~l~w~~~ 97 (326)
T 2qm1_A 77 --GSVDIEKGTVVG--------AYNLNWTTV 97 (326)
T ss_dssp --SEEETTTTEEEC--------BGGGTBCSC
T ss_pred --cceeCCCCEEEe--------cCCCCccCC
Confidence 24564 455441 344568654
No 39
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=98.04 E-value=7.2e-06 Score=88.59 Aligned_cols=79 Identities=9% Similarity=-0.005 Sum_probs=62.1
Q ss_pred CceEEccCCCCCCCCCCCCCcccceeccCCCCCchhHHHHHHH------HHHHHHhhhcccCccEEeccccch--hhhhh
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMICGLTLDSSETSLVTLYLA------TIQALADVTKDVNPAQIKGVGVDA--TCSLV 440 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~i~~l~~~~~~~~~~~~~ggg~~~--~~~~~ 440 (564)
.++.|+|+|.|+|+|++++ +|.|+|++. .+++++... .++...+.-.+.++|++.|||++| |||++
T Consensus 334 ~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~l~RA~lE~~Gia~~~r~~l~~~~~~~~i~~~GG~a~s~~w~Qi~ 407 (482)
T 3h6e_A 334 HGRMILPTLMRGFGPYPHG--RFAWINRPE----DWFERRAAACLYAALVADTALDLIGSTGRILVEGRFAEADVFVRAL 407 (482)
T ss_dssp TTCEEESCSSTTCSSCTTC--CCEEESCCS----SHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEESGGGGCHHHHHHH
T ss_pred CCeEEecCCCCCCCCCCCC--ceEEeCCCH----HHHHHHHHHHHhHHHHHHHHHHHhcCCCeEEEeCCcccCHHHHHHH
Confidence 6789999999999999887 999999999 566664433 122223333345889999999999 99999
Q ss_pred hhh-cCCcceeeCCC
Q psy10531 441 ALD-TNHQPLTISPT 454 (564)
Q Consensus 441 a~~-~~~~~~~~~~~ 454 (564)
||. +| +||.+...
T Consensus 408 ADv~~g-~pV~~~~~ 421 (482)
T 3h6e_A 408 ASLRPD-CAVYTANA 421 (482)
T ss_dssp HHHSTT-SEEEEESS
T ss_pred hhhcCC-CeEEEcCC
Confidence 999 99 88887643
No 40
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.91 E-value=3.7e-05 Score=80.46 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=67.4
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDATC 79 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q~ 79 (564)
.|+||||+|+|++|++++|.+|+++...+.+++. +++++++++.+.+.+++++. +.+..+|.+|||+..+
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG 158 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILAHEAHPLPS--------QSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPG 158 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCS--------SCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESS
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEEEEEEccCC--------CCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeec
Confidence 3899999999999999999999999988777652 45899999999999998872 3345678888885432
Q ss_pred ceEEEcC-CCCccccCCCCCCCCCcccccCcc
Q psy10531 80 SLVALDT-NHQPLTISPTGDDSRNVLLWMDHR 110 (564)
Q Consensus 80 s~v~~D~-~G~pl~~~~~~~~~~p~i~W~D~R 110 (564)
++|. +|..+. .|.+-|.+-.
T Consensus 159 ---~vd~~~g~v~~--------~~~l~w~~~~ 179 (380)
T 2hoe_A 159 ---PIDTERGIIID--------PRNFPLSQIP 179 (380)
T ss_dssp ---CEETTTTEECC--------CSSCTTBTSC
T ss_pred ---cEECCCCEEec--------cCCCCCcCCC
Confidence 3464 465541 3555787653
No 41
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.91 E-value=2.3e-05 Score=80.70 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=56.1
Q ss_pred Cc-EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH--hcCCCC-CeEEEEEe
Q psy10531 1 ME-YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT--KDVNPA-QIKGVGVD 76 (564)
Q Consensus 1 M~-~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~--~~~~~~-~I~aIgis 76 (564)
|+ |+||||+|+|++|++++|.+|+++.+.+.+. ..+.+++++++|+.+.+.+++++ .+.+.. +|.+|||+
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~ 77 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSEDGKILAEADGLS------TNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLS 77 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEETTSCEEEEEEECC------CCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEE
T ss_pred cceEEEEEEcCccceEEEEEeCCCCEEEEEeCCC------CCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEe
Confidence 54 9999999999999999999999998775532 12335789999999999999987 234445 78888885
No 42
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.91 E-value=2.1e-05 Score=79.24 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=52.3
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEE
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGV 75 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgi 75 (564)
|+|+||||+|+|++|++++|.+|+++.+.+.++ +.+.+++++++++.+.+.+++++... +.+|||
T Consensus 1 mM~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~~~~~----~~~igi 65 (299)
T 2e2o_A 1 MMIIVGVDAGGTKTKAVAYDCEGNFIGEGSSGP------GNYHNVGLTRAIENIKEAVKIAAKGE----ADVVGM 65 (299)
T ss_dssp CCCEEEEEECSSCEEEEEECTTSCEEEEEEESC------CCHHHHCHHHHHHHHHHHHHHHHTSC----CSEEEE
T ss_pred CeEEEEEEeCCCcEEEEEEcCCCCEEEEEeCCC------CCcccCCHHHHHHHHHHHHHHHHhcC----CCEEEE
Confidence 568999999999999999999999998876554 23446789999999999999987431 445555
No 43
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.90 E-value=4.7e-05 Score=77.98 Aligned_cols=84 Identities=10% Similarity=0.065 Sum_probs=63.5
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCceE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCSLV 82 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s~v 82 (564)
|+||||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.++++.... ..+.+|||+. .-
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~--~~~~gigi~~---pG 90 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERVATERVPTP---------TDDYPLLLETIAGLVAKYDQEF--ACEGKIGLGL---PG 90 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC---------TTCHHHHHHHHHHHHHHHHHHH--TSCCEEEEEE---SE
T ss_pred EEEEEEECCCEEEEEEEeCCCcEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHhc--CCccEEEEEe---ec
Confidence 78999999999999999999999998877754 2378899999999999887322 2467777742 23
Q ss_pred EEcC-CCCccccCCCCCCCCCcccc-cCc
Q psy10531 83 ALDT-NHQPLTISPTGDDSRNVLLW-MDH 109 (564)
Q Consensus 83 ~~D~-~G~pl~~~~~~~~~~p~i~W-~D~ 109 (564)
++|. +|... .|.+.| .+-
T Consensus 91 ~vd~~~g~v~---------~~~~~~~~~~ 110 (327)
T 4db3_A 91 MEDADDATVL---------TVNVPAAKGK 110 (327)
T ss_dssp EECTTTCCEE---------ESSSGGGTTS
T ss_pred cEeCCCCEEE---------cCCCccccCC
Confidence 5674 57666 666667 443
No 44
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.89 E-value=5.3e-05 Score=80.56 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=67.2
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCCCc
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDATCS 80 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q~s 80 (564)
|+||||+|+|++|++++|.+|+++.+.+.+++ .++++++++.+.+.+++++. +.+..+|.+|||+..+
T Consensus 109 ~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG- 178 (429)
T 1z05_A 109 QFLSMRLGRGYLTIALHELGGEVLIDTKIDIH---------EIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPG- 178 (429)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEEECC---------CCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESS-
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEcCC---------CCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccC-
Confidence 78999999999999999999999998877654 24689999999999999873 3345679999985432
Q ss_pred eEEEcC-CCCccccCCCCCCCCCcccccCcc
Q psy10531 81 LVALDT-NHQPLTISPTGDDSRNVLLWMDHR 110 (564)
Q Consensus 81 ~v~~D~-~G~pl~~~~~~~~~~p~i~W~D~R 110 (564)
++|. +|..+. .|.+-|.+-.
T Consensus 179 --~vd~~~g~v~~--------~~~l~w~~~~ 199 (429)
T 1z05_A 179 --LVNSEQGIVLQ--------MPHYNVKNLA 199 (429)
T ss_dssp --EEETTTTEEEE--------CSSSBCSSBC
T ss_pred --cEeCCCCeEee--------cCCCCCCCCC
Confidence 4565 465541 4556687654
No 45
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.89 E-value=4.6e-05 Score=77.08 Aligned_cols=66 Identities=23% Similarity=0.371 Sum_probs=52.2
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCe--EEEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQI--KGVGV 75 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I--~aIgi 75 (564)
|+||||+|+|++|++++|.+|+++.+.+.+.. .+ .++++++++.+.+.+++++. +.+..+| .+|||
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~------~~-~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igi 81 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTPLAMAEGGAS------AL-SQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGL 81 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCEEEEEEESCC------CG-GGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCCEEEEEeCCCC------Cc-ccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEE
Confidence 99999999999999999999999987754321 11 36899999999999999873 3444566 56666
No 46
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.84 E-value=4.2e-05 Score=80.67 Aligned_cols=78 Identities=12% Similarity=0.093 Sum_probs=60.6
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDATC 79 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q~ 79 (564)
.|+||||+|+|++|++++|.+|+++.+.+.+++ +++++++++.+.+.+++++. +.+..+|.+|||+..+
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG 155 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDLSSKLVVEESQELA---------LKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPG 155 (406)
T ss_dssp CEEEEEEEETTEEEEEEEETTCCEEEEEEEECC---------SSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESS
T ss_pred cEEEEEEEcCCEEEEEEEcCCCCEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeec
Confidence 389999999999999999999999998877652 45677889999999998873 3345689999995432
Q ss_pred ceEEEcCC-CCcc
Q psy10531 80 SLVALDTN-HQPL 91 (564)
Q Consensus 80 s~v~~D~~-G~pl 91 (564)
++|.+ |..+
T Consensus 156 ---~vd~~~g~v~ 165 (406)
T 1z6r_A 156 ---IIDTENGIVH 165 (406)
T ss_dssp ---EEETTTTEEE
T ss_pred ---CEeCCCCEEe
Confidence 45654 5554
No 47
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.83 E-value=2.1e-05 Score=80.37 Aligned_cols=91 Identities=21% Similarity=0.217 Sum_probs=66.6
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCce
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCSL 81 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s~ 81 (564)
.|+||||+|+|++|++++|.+|+++.+.+.+++. ..+++++++.+.+.+++++. ...+|.+|||+..
T Consensus 19 ~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~--~~~~i~gigi~~p--- 85 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTPEGEIQNATRFMTAD--------WVNGIGFVESMKLEIGNFLK--QYPIVKGVGIGWP--- 85 (321)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHHH--------HHTTTCHHHHHHHHHHHHHH--HCTTCCEEEEEES---
T ss_pred cEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCCC--------CCCHHHHHHHHHHHHHHHHh--ccCCeeEEEEEec---
Confidence 3799999999999999999999999988877652 34667788888888888774 2357888888542
Q ss_pred EEEc-CCCCccccCCCCCCCCCccc-ccCcchHH
Q psy10531 82 VALD-TNHQPLTISPTGDDSRNVLL-WMDHRAVS 113 (564)
Q Consensus 82 v~~D-~~G~pl~~~~~~~~~~p~i~-W~D~Ra~~ 113 (564)
-++| ++|..+. .|.+- |.+-.-.+
T Consensus 86 G~vd~~~g~v~~--------~~~l~~w~~~~l~~ 111 (321)
T 3r8e_A 86 GLVSLDRTKVIL--------LPNIPSVVNVPIVE 111 (321)
T ss_dssp SEECTTSCCEEE--------BTTBCCCCSCCHHH
T ss_pred ccEECCCCEEEe--------CCCCccccCCCHHH
Confidence 3557 4566651 33443 87754433
No 48
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=97.75 E-value=8.9e-05 Score=76.25 Aligned_cols=77 Identities=21% Similarity=0.249 Sum_probs=58.5
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEeCCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVDATC 79 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis~q~ 79 (564)
.|+||||+|+|++|++++|.+|+++.+.+.+++ ++++++++.+.+.+++++. .....+|.+|||+..+
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG 99 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNP----------KTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGG 99 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEECC----------SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESS
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEEEEEEcCC----------CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEeccc
Confidence 489999999999999999999999988766542 3678889999999988762 2234578999985432
Q ss_pred ceEEEcC-CCCcc
Q psy10531 80 SLVALDT-NHQPL 91 (564)
Q Consensus 80 s~v~~D~-~G~pl 91 (564)
++|. +|..+
T Consensus 100 ---~vd~~~g~v~ 109 (343)
T 2yhw_A 100 ---RVNPREGIVL 109 (343)
T ss_dssp ---EEETTTTEEE
T ss_pred ---CEeCCCCEEE
Confidence 4565 46554
No 49
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=97.65 E-value=4.6e-05 Score=83.49 Aligned_cols=77 Identities=8% Similarity=-0.116 Sum_probs=58.3
Q ss_pred CceEEccCCCCCCCCCCCCCccccee------ccCCCCC--------chhHHHHHHHHHHHHHhhhcc-cCccEEecccc
Q psy10531 369 ADFHVWPDFHGNRSPLADADMKGMIC------GLTLDSS--------ETSLVTLYLATIQALADVTKD-VNPAQIKGVGV 433 (564)
Q Consensus 369 ~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~--------~~~l~~~~~~~i~~l~~~~~~-~~~~~~~ggg~ 433 (564)
.++.|+|++.|+|+|+ ++|.|+ +++. ++ .|+++..++.+++.+.. +|. +++|+++|||+
T Consensus 372 ~gl~~lp~~~Ger~P~----~~G~~~~~~~~~g~~~-~~~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga 445 (538)
T 4bc3_A 372 GGNLGFYFDVMEITPE----IIGRHRFNTENHKVAA-FPGDVEVRALIEGQFMAKRIHAEGLGY-RVMSKTKILATGGAS 445 (538)
T ss_dssp GGCEEEEESSCCSSSC----CCEEEEECTTSCEESC-CCHHHHHHHHHHHHHHHHHHHHHHTTC-CCCTTCCEEEEEGGG
T ss_pred CCeEEeecCCCCcCCC----CCceeeeccccccccC-CCHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCeEEEEcchh
Confidence 5678999999999997 345554 2222 45 44555555677777655 455 89999999999
Q ss_pred ch--hhhhhhhhcCCcceeeC
Q psy10531 434 DA--TCSLVALDTNHQPLTIS 452 (564)
Q Consensus 434 ~~--~~~~~a~~~~~~~~~~~ 452 (564)
+| |||++||.+| +||.+.
T Consensus 446 ~s~~~~Qi~ADv~g-~pV~~~ 465 (538)
T 4bc3_A 446 HNREILQVLADVFD-APVYVI 465 (538)
T ss_dssp GCHHHHHHHHHHHT-SCEEEC
T ss_pred cCHHHHHHHHHHhC-CceEec
Confidence 99 9999999999 898874
No 50
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.53 E-value=0.00025 Score=71.44 Aligned_cols=72 Identities=13% Similarity=0.254 Sum_probs=51.4
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCce
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCSL 81 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s~ 81 (564)
+|+||||+|+|++|++++|.+|+++.+.+.+++ ..+++++++.+.+.+++ ..+|.+|||+..
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~i~~~~~~------~~~i~gigi~~p--- 65 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIILTKSAEIS---------GSDGDQILAEMKVFLAE------NTDVTGIAVSAP--- 65 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECS---------TTCHHHHHHHHHHHHHT------CTTCCEEEEEES---
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEEEEEecCC---------CCCHHHHHHHHHHHHhh------cCCeeEEEEecC---
Confidence 378999999999999999999999998877753 23456666655544432 247888888533
Q ss_pred EEEcC-CCCcc
Q psy10531 82 VALDT-NHQPL 91 (564)
Q Consensus 82 v~~D~-~G~pl 91 (564)
-++|. +|..+
T Consensus 66 G~vd~~~g~v~ 76 (297)
T 4htl_A 66 GYVNPKTGLIT 76 (297)
T ss_dssp SEECTTTCEEE
T ss_pred cceeCCCCEEE
Confidence 25674 46665
No 51
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.49 E-value=6.9e-05 Score=76.15 Aligned_cols=85 Identities=14% Similarity=0.198 Sum_probs=59.2
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCceE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCSLV 82 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s~v 82 (564)
|+||||+|+|++|++++|.+|+++.+.+.+++ +.+++++++.+.+.+++++... ..+|.+|||+.. -
T Consensus 8 ~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~-~~~i~gigi~~p---G 74 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTAEGETLHCEKKRTA---------EVIAPGLVSGIGEMIDEQLRRF-NARCHGLVMGFP---A 74 (310)
T ss_dssp EEEEEEECSSEEEEEEEETTSCEEEEEEEEHH---------HHHTTCHHHHHHHHHHHHHHHH-TEEEEEEEEEES---S
T ss_pred EEEEEEeCCCEEEEEEECCCCCEEEEEEecCc---------cccHHHHHHHHHHHHHHHHHhc-CCCeeEEEEecc---c
Confidence 89999999999999999999999998876654 2234567778888887765321 125788888533 2
Q ss_pred EEcCC-CCccccCCCCCCCCCcccccC
Q psy10531 83 ALDTN-HQPLTISPTGDDSRNVLLWMD 108 (564)
Q Consensus 83 ~~D~~-G~pl~~~~~~~~~~p~i~W~D 108 (564)
++|.+ |..+. .|.+-|.+
T Consensus 75 ~vd~~~g~v~~--------~~~l~~~~ 93 (310)
T 3htv_A 75 LVSKDKRTIIS--------TPNLPLTA 93 (310)
T ss_dssp CBCTTSSCBCS--------CCSSSCCH
T ss_pred cEeCCCCEEEe--------CCCCCCcc
Confidence 45754 55541 34566765
No 52
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=97.47 E-value=6.8e-05 Score=81.05 Aligned_cols=76 Identities=20% Similarity=0.294 Sum_probs=60.7
Q ss_pred CCCCCCCCC-----cccceeccC--CCCC--------chhHHHHHHHHHHHHHhhhcc-cCccEEeccccch--hhhhhh
Q psy10531 380 NRSPLADAD-----MKGMICGLT--LDSS--------ETSLVTLYLATIQALADVTKD-VNPAQIKGVGVDA--TCSLVA 441 (564)
Q Consensus 380 ~~~~~~~~~-----~~~~~~~~~--~~~~--------~~~l~~~~~~~i~~l~~~~~~-~~~~~~~ggg~~~--~~~~~a 441 (564)
+|.|+++++ .++.+.|+. ..++ .|+++-.++.+++.+.+.+|. +++|+++|||++| |||++|
T Consensus 335 ~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~A 414 (489)
T 2uyt_A 335 NDDRFINPDEMCSEIQAACREMAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCA 414 (489)
T ss_dssp TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHH
T ss_pred CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHH
Confidence 455677766 578888884 5666 555555678899999888887 9999999999999 999999
Q ss_pred hhcCCcceeeCCCCC
Q psy10531 442 LDTNHQPLTISPTDT 456 (564)
Q Consensus 442 ~~~~~~~~~~~~~~~ 456 (564)
|.+| +||.+++.|.
T Consensus 415 Dvlg-~pV~~~~~e~ 428 (489)
T 2uyt_A 415 DACG-IRVIAGPVEA 428 (489)
T ss_dssp HHHT-SEEEECCTTH
T ss_pred HHHC-CeeecCCccH
Confidence 9999 8888765443
No 53
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.34 E-value=0.00031 Score=70.97 Aligned_cols=75 Identities=13% Similarity=0.255 Sum_probs=53.1
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCceE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCSLV 82 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s~v 82 (564)
|+||||+|+|++|++++|.+ +++...+.+++ .++++++++.+.+.++++.... ..+|.+|||+.. .
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~-~~l~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~-~~~i~gigi~~p---G 67 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK-RLLSKVVVPTP---------KEGGERVAEALAEAAERAEREA-GVRGEAIGLGTP---G 67 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS-SBSCCEEEECC---------SSCHHHHHHHHHHHHHHHHHHH-TCCCSSEEEEES---S
T ss_pred EEEEEEEcCCEEEEEEEeCC-CcEEEEEEcCC---------CCChHHHHHHHHHHHHHHHhhc-cCCceEEEEEec---c
Confidence 79999999999999999998 55566666554 2344788999999998877321 356778887432 2
Q ss_pred EEcCC-CCcc
Q psy10531 83 ALDTN-HQPL 91 (564)
Q Consensus 83 ~~D~~-G~pl 91 (564)
++|.+ |...
T Consensus 68 ~vd~~~g~v~ 77 (302)
T 3vov_A 68 PLDFRRGVIR 77 (302)
T ss_dssp CEETTTTEEC
T ss_pred cEeCCCCEEE
Confidence 35643 5433
No 54
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.32 E-value=0.00049 Score=69.57 Aligned_cols=58 Identities=12% Similarity=0.220 Sum_probs=43.6
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDA 77 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~ 77 (564)
+|+||||+|+|++|++++|.+|+++.+.+.+++ +++++++.+.+.+++ .+|.+|||+.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t~-----------~~~~~l~~i~~~~~~-------~~i~gigi~~ 60 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPTX-----------MPDETIEXVIQYFSQ-------FSLQAIGIGS 60 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECC-----------CHHHHHHHHHHHHTT-------SCCSEEEEEE
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecCC-----------ChHHHHHHHHHHhcc-------CCceEEEEEe
Confidence 478999999999999999999999988776642 356666555544331 3688888853
No 55
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.17 E-value=0.00083 Score=67.03 Aligned_cols=53 Identities=19% Similarity=0.371 Sum_probs=43.5
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK 63 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~ 63 (564)
|+||||+|.|++|++++|.+|+++.+.+.+++. ..+++++.+.+.+.++++..
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~ 54 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPA--------SQTPEALRDALSALVSPLQA 54 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCS--------SCCHHHHHHHHHHHHTTTGG
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCC--------CCCHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999888776542 23578888888888777653
No 56
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.10 E-value=0.0038 Score=61.60 Aligned_cols=77 Identities=19% Similarity=0.335 Sum_probs=50.4
Q ss_pred EEEEEEeCccceEEEEEeCC-CCEEEE-EEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCC-CCCeEEEEEeCCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTR-GKVSPI-AVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVN-PAQIKGVGVDATC 79 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~-G~il~~-~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~-~~~I~aIgis~q~ 79 (564)
|+||||+|+|++|++++|.+ |+++.. .+.+++ ...+++++++.+.+.++++..... ...+.+|||+. .
T Consensus 13 ~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~igi~~-p 83 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP--------QPATPESVAEAVALVVAELSARPEAPAAGSPVGVTF-P 83 (267)
T ss_dssp CEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC--------SSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEE-S
T ss_pred EEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC--------ccCCHHHHHHHHHHHHHHHHHhccccCccceEEEEc-c
Confidence 68999999999999999987 777743 333332 134688899999999988873211 12333444422 3
Q ss_pred ceEEEcCCCCcc
Q psy10531 80 SLVALDTNHQPL 91 (564)
Q Consensus 80 s~v~~D~~G~pl 91 (564)
+.| | +|..+
T Consensus 84 G~v--~-~g~v~ 92 (267)
T 1woq_A 84 GII--Q-HGVVH 92 (267)
T ss_dssp SCE--E-TTEEC
T ss_pred ceE--c-CCEEE
Confidence 333 5 56554
No 57
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.05 E-value=0.0012 Score=65.58 Aligned_cols=63 Identities=11% Similarity=0.197 Sum_probs=41.7
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT 78 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q 78 (564)
||+||||+|||++|++++|.+++++.....+. |...... .+++++++ .+....++..+++++.
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~il~~~~~~~-------g~~~e~a-------~~vl~~~~~~a~~~~~~~~~~a~t~~ 65 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGEDIVASETISS-------GTGTTGP-------SRVLEKLYGKTGLAREDIKKVVVTGY 65 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEESC-------CTTSSHH-------HHHHHHHHHHHCCCGGGEEEEEEEST
T ss_pred CeEEEEEcCccEEEEEEEECCCeEEEEEEecC-------CCCHHHH-------HHHHHHHHHHCCCcchhccccccCch
Confidence 58999999999999999999999987664432 2222222 22344444 2344567788877653
No 58
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.05 E-value=0.001 Score=66.74 Aligned_cols=66 Identities=14% Similarity=0.100 Sum_probs=48.9
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
++||||+|+|++|++++| +|+++.+.+.+..- ...++++.+++.+.+.++++. +.+..++.+|||+
T Consensus 1 ~~lgiDiGGT~~~~~l~d-~g~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~~-~~~~~~i~~igig 66 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK-EGKSLGRFQTSGIN------PFQQDRNEIDTALRSEVLPAI-GQKASSIRAVYFY 66 (291)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEECCC------TTTSCHHHHHHHHTTTTHHHH-TTSTTTCCEEEEE
T ss_pred CEEEEEeCccceEEEEEe-CCeEEEEEECCCCC------cccCCHHHHHHHHHHHHHHHh-CCCcccccEEEEE
Confidence 479999999999999999 99999887654321 113478888888888887764 2234568778773
No 59
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.99 E-value=0.0026 Score=64.67 Aligned_cols=62 Identities=13% Similarity=0.267 Sum_probs=48.4
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGV 75 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgi 75 (564)
|+||||+|.|++|++++|.+|+++.+.+.+++. .+++++.+.+.+.++++.... ..+.+|||
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~--~~i~~igi 86 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPH---------TSYSAFLDAVCELVEEADQRF--GVKGSVGI 86 (327)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEECCC---------SCHHHHHHHHHHHHHHHHHHH--TSCCEEEE
T ss_pred eEEEEEECCCEEEEEEEeCCCCEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHHhc--CCccEEEE
Confidence 789999999999999999999999888766531 256788888888888876322 23666666
No 60
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.97 E-value=0.0015 Score=65.28 Aligned_cols=69 Identities=13% Similarity=0.219 Sum_probs=48.7
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCceE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDATCSLV 82 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q~s~v 82 (564)
++||||+|.|++|++++|.+|+++.+.+.+++ .+++++.+.+.+.+++ .++.+|||+. .-
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~----------~~~~~~~~~i~~~i~~-------~~i~gigi~~---pG 64 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTP----------ENLEDLLAWLDQRLSE-------QDYSGIAMSV---PG 64 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCC----------SSHHHHHHHHHHHHTT-------SCCSEEEEEE---SS
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCC----------CCHHHHHHHHHHHHHh-------CCCcEEEEEe---cC
Confidence 58999999999999999999999988765532 3566666665555543 4677888743 22
Q ss_pred EEcC-CCCcc
Q psy10531 83 ALDT-NHQPL 91 (564)
Q Consensus 83 ~~D~-~G~pl 91 (564)
++|. +|..+
T Consensus 65 ~vd~~~g~v~ 74 (292)
T 2gup_A 65 AVNQETGVID 74 (292)
T ss_dssp EECTTTCBEE
T ss_pred cccCCCCEEE
Confidence 4564 46554
No 61
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=96.93 E-value=0.0012 Score=68.60 Aligned_cols=73 Identities=12% Similarity=0.086 Sum_probs=53.4
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEE-EeeccccCCCCCccccCHHHHHHHHHH---HHHHHHhcCCCCCeEEEEEeC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIA-VRPIALWCPKPQLYEQSSEDIWNSVCL---AIRDVTKDVNPAQIKGVGVDA 77 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~-~~~~~~~~~~~g~~eqd~~~~~~~i~~---~l~~l~~~~~~~~I~aIgis~ 77 (564)
.|+||||+|.|++|++++| +|+++.+. +.+++. . +++++.+.+.+ .+++++. .+|.+|||+.
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~~--------~-~~~~~l~~i~~~~~~i~~~~~----~~i~gIGIav 74 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPACA--------D-CLDKCLGNLVEGFKAIQAGLP----EAPVAISFAF 74 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-TTEECSCCEEEECCT--------T-CHHHHHHHHHHHHHHHHTTCS----SCCCEEEEEC
T ss_pred CEEEEEEECcceEEEEEEE-CCEEEEEEEEEECCC--------C-CHHHHHHHHHHHHHHHHHHhh----cCCeEEEEEe
Confidence 3899999999999999999 99999776 665542 2 78888888888 5554432 5788999853
Q ss_pred CCceEEEcC-CCCcc
Q psy10531 78 TCSLVALDT-NHQPL 91 (564)
Q Consensus 78 q~s~v~~D~-~G~pl 91 (564)
. .++|. +|..+
T Consensus 75 P---G~Vd~~~G~i~ 86 (366)
T 3mcp_A 75 P---GPADYQAGIIG 86 (366)
T ss_dssp C---SSEETTTTEEC
T ss_pred c---ceEeCCCCEEE
Confidence 2 33564 46554
No 62
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=96.67 E-value=0.0012 Score=68.55 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=51.1
Q ss_pred CcEEEEEEeCccceEEEEEeC----CCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 1 MEYLLSVDVGTSSVRAALVST----RGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~----~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
|+|+||||+|+|++|++++|. +|+++...+. ++. .+++.+.+.+.+.++++... .+.+|.+|||+
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~~---------~~~~~~~~~i~~~i~~~~~~-~~~~i~gigi~ 96 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MKR---------KDITEIIEFFNEIIELMPAS-VMKRVKAGVIN 96 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CTT---------CBGGGHHHHHHHHHHHSCHH-HHTTEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cCC---------CCHHHHHHHHHHHHHHHhhc-ccccccEEEEE
Confidence 578999999999999999998 8998877641 111 24556777777777665421 12468888874
Q ss_pred CCCceEEEcCCCCcc
Q psy10531 77 ATCSLVALDTNHQPL 91 (564)
Q Consensus 77 ~q~s~v~~D~~G~pl 91 (564)
.. .++|. |...
T Consensus 97 ~p---G~vd~-g~v~ 107 (373)
T 2q2r_A 97 VP---GPVTG-GAVG 107 (373)
T ss_dssp ES---SCEET-TTEE
T ss_pred ee---ccccC-CEEe
Confidence 32 23455 5544
No 63
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.54 E-value=0.0038 Score=61.77 Aligned_cols=64 Identities=16% Similarity=0.302 Sum_probs=42.8
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
|+++|+||+|.|++|.++||. ++++...+.+++ ....+++...+.+.++. .+.+.++|.+|+||
T Consensus 1 M~MlL~IDIGNT~iK~gl~d~-~~l~~~~r~~T~---------~~t~de~~~~l~~ll~~--~~~~~~~I~~iiIS 64 (266)
T 3djc_A 1 MSLILCIDVGNSHIYGGVFDG-DEIKLRFRHTSK---------VSTSDELGIFLKSVLRE--NNCSPETIRKIAIC 64 (266)
T ss_dssp --CEEEEEECSSEEEEEEEET-TEEEEEEEEECS---------CCCHHHHHHHHHHHHHT--TTCCGGGCCEEEEE
T ss_pred CceEEEEEECCCeEEEEEEEC-CEEEEEEEecCC---------CCCHHHHHHHHHHHHHH--cCCChhhceEEEEe
Confidence 667899999999999999995 688877777654 23455654443333332 23344578999984
No 64
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.48 E-value=0.00058 Score=68.53 Aligned_cols=64 Identities=19% Similarity=0.119 Sum_probs=33.0
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
|+||||+|+|++|++++| +|+++.+.+.+.. .+. ..+++.+++.+.+.+++++ +..++.+|||+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~--~~~----~~~~~~~~~~i~~~i~~~~---~~~~i~~igig 64 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGI--NPF----FQSEEEIQQKLTASLLPQL---PEGKFNAVYFY 64 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCC--CTT----TSCSTTTTTTTTC----------------CEEE
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCC--Ccc----cCCHHHHHHHHHHHHHHhc---CcccccEEEEE
Confidence 479999999999999999 9999988765431 111 1233444555555555544 22357777774
No 65
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=96.47 E-value=0.007 Score=64.55 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=42.4
Q ss_pred EEEEEEeCccceEEEEEeCCCCE---EEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKV---SPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT 62 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~i---l~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~ 62 (564)
++||||+|+|++|++++|.+|++ +...+.+++. + -..-+++++++.+.+++++.+
T Consensus 62 ~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~----~-~~~~~~~~lfd~Ia~~i~~~~ 119 (457)
T 2yhx_A 62 SFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAA----M-STTAIPSDLWGNXAXSNAAFS 119 (457)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTT----T-TSCSCTHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCC----c-cCCCCHHHHHHHHHHHHHHHH
Confidence 57999999999999999999998 5554444432 1 112367899999999999987
No 66
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.31 E-value=0.0051 Score=62.73 Aligned_cols=33 Identities=30% Similarity=0.389 Sum_probs=27.6
Q ss_pred CcEEEEEEeCccceEEEEEeC-CCCEEEEEEeec
Q psy10531 1 MEYLLSVDVGTSSVRAALVST-RGKVSPIAVRPI 33 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~ 33 (564)
|.|+||||+|+|++|++++|. +|+++...+.++
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~ 46 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQAKTYSG 46 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEEEEEecC
Confidence 569999999999999999995 799987665554
No 67
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.16 E-value=0.0041 Score=60.09 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=36.7
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
.|+||||+|+|++| ++|.+|++ ..+.+++ ...+++++.+.+.+.++ .. ++.+|||+
T Consensus 6 ~~~lgiDIGGT~i~--~~d~~g~~--~~~~~t~--------~~~~~~~~~~~i~~~i~----~~---~i~gigi~ 61 (226)
T 3lm2_A 6 QTVLAIDIGGSHVK--IGLSTDGE--ERKVESG--------KTMTGPEMVAAVTAMAK----DM---TYDVIAMG 61 (226)
T ss_dssp CCEEEEEECSSEEE--EEETTTCC--EEEEECC--------TTCCHHHHHHHHHHHTT----TC---CCSEEEEE
T ss_pred CEEEEEEECCCEEE--EEECCCCE--EEEEECC--------CCCCHHHHHHHHHHHHH----hC---CCCEEEEE
Confidence 38999999999999 57888886 2334433 13466666655544433 22 57778774
No 68
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.08 E-value=0.0036 Score=65.36 Aligned_cols=33 Identities=12% Similarity=0.276 Sum_probs=29.4
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeecc
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIA 34 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~ 34 (564)
|+++||||+|+|++|++++|.+ +++.+.+.+++
T Consensus 1 m~~vlgidiGgt~ik~al~d~~-~il~~~~~~~~ 33 (381)
T 1saz_A 1 MFRILTINPGSTSTKLSIFEDE-RMVKMQNFSHS 33 (381)
T ss_dssp CCEEEEEEECSSEEEEEEEETT-EEEEEEEEECC
T ss_pred CCeEEEEECCccceeEEEEecc-hheeeeecccC
Confidence 8899999999999999999976 88888877764
No 69
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=95.80 E-value=0.027 Score=59.94 Aligned_cols=68 Identities=15% Similarity=0.234 Sum_probs=45.6
Q ss_pred EEEEEEeCccceEEEEEeCCC-CE---EEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTRG-KV---SPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G-~i---l~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis 76 (564)
++||||+|+|++|+++++.+| +- +...+.+.+. .-...+.+++++.+.+++++.+. +.. .+...+||+
T Consensus 69 ~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~-----~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-~~~~~lG~t 142 (451)
T 1bdg_A 69 NFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPA-----EKMSGSGTELFKYIAETLADFLENNGMK-DKKFDLGFT 142 (451)
T ss_dssp EEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCT-----TTTTSBHHHHHHHHHHHHHHHHHHTTCC-SSCEEEEEE
T ss_pred eEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCC-----cccCCCHHHHHHHHHHHHHHHHHhcCCC-ccccceEEE
Confidence 689999999999999999988 51 1122222221 11234778999999999999883 222 233556664
No 70
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=95.52 E-value=0.051 Score=53.23 Aligned_cols=58 Identities=17% Similarity=0.088 Sum_probs=42.1
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT 62 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~ 62 (564)
++++|||+||+++|++++|.+++++.....+.... .+ ....|.+..++.+...++.+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~l--~~-g~i~d~~~~~~~l~~~~~~~~ 85 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVV--KD-GLVVDYIGAIQIVRELKAKVE 85 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCC--BT-TBCTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCCcEEEEEeeccccc--CC-CEEEcHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999998876664422 22 344566666666666665554
No 71
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.52 E-value=0.024 Score=55.43 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=42.9
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
.+|+||+|.|++|.++|| +++++...+.+++. .+..+++...+.+.++. ...+|.+|.||
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T~~--------~~t~de~~~~l~~l~~~-----~~~~i~~i~Is 63 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLSTGV--------FQTEDELFSHLHPLLGD-----AMREIKGIGVA 63 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEECCT--------TCCHHHHHHHHHHHHGG-----GGGGEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecCCC--------CCCHHHHHHHHHHHHhh-----ccccCCEEEEE
Confidence 579999999999999998 66777777666542 34567776655544433 23468888884
No 72
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=95.42 E-value=0.028 Score=65.23 Aligned_cols=70 Identities=17% Similarity=0.220 Sum_probs=49.0
Q ss_pred EEEEEEeCccceEEEEEeCCCC----E-EEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCC-eEEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGK----V-SPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQ-IKGVG 74 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~----i-l~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~-I~aIg 74 (564)
.+||||+|+|++|++++|.+|+ + +...+.+++.. ..+.+.+++++.+.+++++.+. +...+. ..+|+
T Consensus 79 ~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~-----~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~~~lGi~ 153 (917)
T 1cza_N 79 DFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPEN-----IVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFT 153 (917)
T ss_dssp EEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHH-----HHSSBHHHHHHHHHHHHHHHHHHHTCTTSCCCEEEE
T ss_pred eEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCcc-----cccCCHHHHHHHHHHHHHHHHHhcCCCCCcccEEEE
Confidence 5799999999999999999876 4 55555544310 1134778999999999999872 222222 56777
Q ss_pred EeC
Q psy10531 75 VDA 77 (564)
Q Consensus 75 is~ 77 (564)
++.
T Consensus 154 fs~ 156 (917)
T 1cza_N 154 FSF 156 (917)
T ss_dssp ECS
T ss_pred Ecc
Confidence 764
No 73
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.38 E-value=0.035 Score=61.15 Aligned_cols=75 Identities=21% Similarity=0.234 Sum_probs=51.8
Q ss_pred EEEEEEeCccceEEEEEeC-CCCEEEEEEeeccccCCCCC------cc---ccCHHHHHHHHHHHHHH----HH--hcCC
Q psy10531 3 YLLSVDVGTSSVRAALVST-RGKVSPIAVRPIALWCPKPQ------LY---EQSSEDIWNSVCLAIRD----VT--KDVN 66 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~~~~~~~~g------~~---eqd~~~~~~~i~~~l~~----l~--~~~~ 66 (564)
|-++||+|||.+.+.|+|. +|+++++.+.-.++...... ++ +...+++-+++.+.+.+ +. .+++
T Consensus 207 ~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i~ 286 (631)
T 3zyy_X 207 FGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGVE 286 (631)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6799999999999999997 89999999888776443321 11 11223344444444444 43 4677
Q ss_pred CCCeEEEEEeC
Q psy10531 67 PAQIKGVGVDA 77 (564)
Q Consensus 67 ~~~I~aIgis~ 77 (564)
+++|..+.|.+
T Consensus 287 ~~~I~~~~v~G 297 (631)
T 3zyy_X 287 KKEIMAAVVAG 297 (631)
T ss_dssp GGGEEEEEEEE
T ss_pred HHHeeEEEEEc
Confidence 88999999865
No 74
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=94.67 E-value=0.095 Score=56.09 Aligned_cols=71 Identities=20% Similarity=0.394 Sum_probs=44.3
Q ss_pred EEEEEEeCccceEEEEEeCCCCE-EEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhc--CC-CCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKV-SPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKD--VN-PAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~i-l~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~--~~-~~~I~aIgis 76 (564)
.+|+||+|+|++|+++++.+|+- ....+..+++ |.. -..-..+++++.+.+++++.+.. .. ..+...+||+
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I--p~~-~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGft 155 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL--PDH-LRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFT 155 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC--CTT-GGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEE
T ss_pred EEEEEEecCCeEEEEEEEECCCCceEEEEEEEec--Cch-hccCCHHHHHHHHHHHHHHHHHHhcccccccccceEEE
Confidence 68999999999999999998761 1111212221 111 11223789999999999998732 11 1344456663
No 75
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=94.20 E-value=0.11 Score=51.42 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=42.6
Q ss_pred EEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEe
Q psy10531 4 LLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVD 76 (564)
Q Consensus 4 ~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis 76 (564)
+|.||+|.|++|.++|| +++++...+.+++. .+..+++...+.+.++. .++++.+|.+|.+|
T Consensus 2 lL~IDIGNT~ik~gl~~-~~~l~~~~r~~T~~--------~~t~de~~~~l~~ll~~--~~~~~~~i~~iiIS 63 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE-EGELRQHWRMETDR--------HKTEDEYGMLVKQLLEH--EGLSFEDVKGIIVS 63 (268)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEECCT--------TCCHHHHHHHHHHHHHH--TTCCGGGCCEEEEE
T ss_pred EEEEEECcCcEEEEEEE-CCEEEEEEEecCCC--------cCCHHHHHHHHHHHHHH--cCCCcccCcEEEEE
Confidence 58899999999999998 56777777666542 34566776665555443 23344567888884
No 76
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=93.70 E-value=0.11 Score=60.13 Aligned_cols=70 Identities=21% Similarity=0.458 Sum_probs=46.7
Q ss_pred EEEEEEeCccceEEEEEeCC-CC--EEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTR-GK--VSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK--DVNPAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~-G~--il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~--~~~~~~I~aIgis 76 (564)
.+|+||+|+|++|+++++.+ |+ ++...+..+.+ |.+ -..-+.+++++.+.+++++.+. +...+.+ .+||+
T Consensus 527 ~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l-~lG~t 601 (917)
T 1cza_N 527 DFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAI--PIE-IMQGTGEELFDHIVSCISDFLDYMGIKGPRM-PLGFT 601 (917)
T ss_dssp EEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECC--CHH-HHTSBHHHHHHHHHHHHHHHHHHHTCCSSCC-EEEEE
T ss_pred EEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEec--Ccc-cccCCHHHHHHHHHHHHHHHHHHcCCCccce-eEEEE
Confidence 68999999999999999985 64 66444443332 111 0123568899999999999872 3333344 56664
No 77
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=93.31 E-value=0.12 Score=50.71 Aligned_cols=60 Identities=15% Similarity=0.264 Sum_probs=46.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeeccCC
Q psy10531 495 SSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 495 ~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
.+++++ .+++.+.++-.+... ..+.. . +++|+++||.++|+.+++.+++.+|+++.+|..
T Consensus 180 ~~~~di---~a~~~~~v~~~l~~~---~~~~~-~--~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~ 239 (276)
T 4ehu_A 180 AKIEDI---VAGIHTSVAKRVSSL---VKRIG-V--QRNVVMVGGVARNSGIVRAMAREINTEIIVPDI 239 (276)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHH---HHHHC-C--CSSEEEESGGGGCHHHHHHHHHHHTSCEECCSS
T ss_pred ccHHHH---HHHHHHHHHHHHHHH---HHhcc-c--CCeEEEecCccchHHHHHHHHHHHCCCeeeCCC
Confidence 467889 779998887655433 22222 2 578999999999999999999999999998763
No 78
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=92.58 E-value=0.41 Score=50.33 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=50.0
Q ss_pred EEEEEEeCccceEEEEEeCC--C-CEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeC
Q psy10531 3 YLLSVDVGTSSVRAALVSTR--G-KVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDA 77 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~--G-~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~ 77 (564)
+++||||||+++|+++...+ | ++++....|..- -..| .-.|.+..-+++.++++++- .+....+=..+++++
T Consensus 9 ~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~g--v~~G-~I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~g 85 (419)
T 4a2a_A 9 FYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRG--LDEG-EIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSS 85 (419)
T ss_dssp EEEEEEECSSEEEEEEEEC----CEEEEEEEEECCS--EETT-EESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEECC
T ss_pred EEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCC--eeCC-EEEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEcC
Confidence 78999999999999999753 3 677777655221 1223 34689999899999988874 454444414577776
Q ss_pred C
Q psy10531 78 T 78 (564)
Q Consensus 78 q 78 (564)
.
T Consensus 86 ~ 86 (419)
T 4a2a_A 86 V 86 (419)
T ss_dssp T
T ss_pred C
Confidence 5
No 79
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.40 E-value=0.32 Score=49.93 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-c-CCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 504 YLATIQALAYGTRHIMDAMHA-A-GKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 504 ~~A~~Egva~~~~~~~~~l~~-~-g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
++..++.+.-.++..++.+.. . ... ++.|+++||+++.+.+.+.+++.||.|+.+.
T Consensus 280 i~~~~~~i~~~i~~~l~~~~~~~~~~~--~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~ 337 (377)
T 2ych_A 280 IRPVLVELTQELRRSLEFFRIQLEEAS--PEVGYLLGGGSKLRGLASLLTDTLGVNLEPV 337 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---C--CSEEEEESGGGGSTTHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCC--cCEEEEECccccchhHHHHHHHHhCCCeEec
Confidence 677888888888888876542 2 224 7899999999999999999999999998764
No 80
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=90.79 E-value=0.39 Score=49.35 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=42.8
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcC-CeeeccC
Q psy10531 495 SSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTG-CNVLCPQ 562 (564)
Q Consensus 495 ~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g-~~v~~~~ 562 (564)
.+++|+ .+-+.|=.|-.+.+.++.+ ... +++|+++|||++|+.+|+.++..+. .+|...+
T Consensus 256 ls~~Dv---~ATLt~~TA~sIa~~~~~~---~~~--~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d 316 (371)
T 3qbx_A 256 LPAADI---QATLLELSARSISESLLDA---QPD--CEEVLVCGGGAFNTALMKRLAMLMPEARVASTD 316 (371)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHH---CTT--CCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGG
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHhc---cCC--CceEEEECCccCcHHHHHHHHHhCCCCEEeCHH
Confidence 368888 5566665555555444332 223 6899999999999999999999884 7776543
No 81
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=90.38 E-value=0.39 Score=42.98 Aligned_cols=25 Identities=28% Similarity=0.447 Sum_probs=22.2
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSP 27 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~ 27 (564)
.+||||.|+..++.++.|..|.+..
T Consensus 4 riLGiDpG~~riGvAv~d~~g~~a~ 28 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEMGWTAQ 28 (150)
T ss_dssp EEEEEEECSSEEEEEEECTTSSSEE
T ss_pred EEEEEEccCCEEEEEEEECCCCEEe
Confidence 5899999999999999999887643
No 82
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=90.35 E-value=0.85 Score=46.19 Aligned_cols=71 Identities=14% Similarity=0.145 Sum_probs=46.1
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCcccc-CHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEe
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQ-SSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVD 76 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eq-d~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis 76 (564)
++||||.++..++++|++. |++++.....+. .+..|+.-. ....-.+.+..++++++ .+++.++|.+|+++
T Consensus 2 ~iLgIdts~~~~~val~~~-g~i~~~~~~~~~--~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~ 75 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE-DKVLANVFDTLT--TEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFS 75 (330)
T ss_dssp CEEEEECSSSEEEEEEECS-SCEEEEEEEECC--CTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEE
T ss_pred EEEEEEccCCCeEEEEEEC-CEEEEEEEEEee--cccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEE
Confidence 5899999999999999974 688866554432 333444311 11122334455566665 46677899999885
No 83
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=89.07 E-value=0.64 Score=49.39 Aligned_cols=58 Identities=19% Similarity=0.296 Sum_probs=39.8
Q ss_pred EEEEEEeCccceEEEEEeCCCC-----EEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHh
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGK-----VSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTK 63 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~-----il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~ 63 (564)
.+|+||+|+|+.|+++++..|. .+...+..|++ |+. -..-..+++|+-+.++|.+.+.
T Consensus 78 ~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~I--p~~-l~~gt~~eLFd~IA~~i~~fl~ 140 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSI--PED-AMTGTAEMLFDYISECISDFLD 140 (470)
T ss_dssp EEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEEC--CHH-HHSSBHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecC--ChH-hccCCHHHHHHHHHHHHHHHHh
Confidence 4799999999999999998653 34433333332 211 1123568899999999999873
No 84
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=88.75 E-value=0.8 Score=48.29 Aligned_cols=56 Identities=20% Similarity=0.367 Sum_probs=38.6
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT 62 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~ 62 (564)
.+|+||+|+|++|+++++..|. +...+..+++ |. ....-..+++++-+.++|.+.+
T Consensus 60 ~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~i--p~-~~~~g~~~~LFd~Ia~~i~~fl 115 (445)
T 3hm8_A 60 DFLALDLGGTNFRVLLVRVTTG-VQITSEIYSI--PE-TVAQGSGQQLFDHIVDCIVDFQ 115 (445)
T ss_dssp EEEEEEESSSSEEEEEEEESSS-EEEEEEEECC--CH-HHHTSBHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEECCc-eEEEEEEecc--Cc-cccCCCHHHHHHHHHHHHHHHH
Confidence 5899999999999999999876 3333322221 11 0011246789999999999887
No 85
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=88.65 E-value=0.61 Score=47.92 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=41.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhc-CCeeec
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVT-GCNVLC 560 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~~v~~ 560 (564)
+++|+ .+-+.|=.|..+.+.++.+ . . ..+|+++|||++|+.+|+.++..+ +.+|..
T Consensus 264 ~~~Dv---~ATLt~~TA~sIa~~~~~~---~-~--~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~ 320 (370)
T 3cqy_A 264 NEEDI---QSTLLDLTCHSIAQDILKL---A-Q--EGELFVCGGGAFNAELMQRLAALLPGYRIDT 320 (370)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHH---C-S--SEEEEEESGGGGCHHHHHHHHHHCTTEEEEE
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHhc---C-C--CCEEEEECCCcCCHHHHHHHHHhCCCCeeee
Confidence 57788 5566665555555555433 2 3 679999999999999999999998 556653
No 86
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=88.14 E-value=0.24 Score=48.27 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeeccC
Q psy10531 504 YLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 504 ~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~ 562 (564)
++.+++.+.-.++..++ ..+ . ++.|+++||+++++.+.+.+.+.++.||.++.
T Consensus 206 ~~~~~~~i~~~i~~~l~---~~~-~--~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~ 258 (272)
T 3h1q_A 206 VRPVIEKMALIVKEVIK---NYD-Q--TLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPI 258 (272)
T ss_dssp HHHHHHHHHHHHHHHTT---TSC-S--SCCEEEESGGGGSTTHHHHHHHHHSSCCBCCS
T ss_pred HHHHHHHHHHHHHHHHH---hcC-C--CCEEEEECCccchhhHHHHHHHHhCCCccccC
Confidence 66777776655555443 222 2 67899999999999999999999999998764
No 87
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=88.12 E-value=1.5 Score=43.47 Aligned_cols=65 Identities=14% Similarity=0.177 Sum_probs=50.9
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcC-CcccHHHHHHHhhh---cCCeeeccCC
Q psy10531 493 LDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGG-LAKNPLYVQTHADV---TGCNVLCPQE 563 (564)
Q Consensus 493 ~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG-~a~s~~~~q~~Adv---~g~~v~~~~~ 563 (564)
...+++|+ .++++.+|+..+..+.....+ ..+ +++|+++|| .+.|+..++.+.+. .+.++.+|+.
T Consensus 205 ~g~~~eDI---aasl~~sV~~~I~~la~~~a~-~~~--i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~ 273 (287)
T 2ews_A 205 ADFTPSNK---LAAVIGVVGEVVTTMAITVAR-EFK--TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVEN 273 (287)
T ss_dssp SCCCHHHH---HHHHHHHHHHHHHHHHHHHHH-HTT--CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTT
T ss_pred CCCCHHHH---HHHHHHHHHHHHHHHHHHHHH-hCC--CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCC
Confidence 35689999 889999998877665543222 233 678999999 89999999999998 5888888865
No 88
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=87.72 E-value=0.57 Score=46.66 Aligned_cols=35 Identities=14% Similarity=0.137 Sum_probs=29.8
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWC 37 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~ 37 (564)
.++|+||-||||+|+-++| +|+++.+.+.+..+..
T Consensus 6 ~~~IavDWGTs~lRa~l~~-~g~vl~~~~~~~Gv~~ 40 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ-GEECLESRQSEAGVTR 40 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE-TTEEEEEEEESCCTTC
T ss_pred ccEEEEEecchheeeeeec-CCceehhhcCCCchhh
Confidence 3789999999999999999 8999998877765543
No 89
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=86.53 E-value=0.64 Score=46.96 Aligned_cols=31 Identities=13% Similarity=0.361 Sum_probs=22.1
Q ss_pred EEEEEeCccceEEEEEeCCCCEEEEEEeeccc
Q psy10531 4 LLSVDVGTSSVRAALVSTRGKVSPIAVRPIAL 35 (564)
Q Consensus 4 ~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~ 35 (564)
+||+|||+-++|+++++.+|++ ...+.+.|+
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~-~~~~~~~Pl 32 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEF-KVHHLYFPM 32 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCC-EEEEC----
T ss_pred eeEEEecccceeeeeecCCCce-EEEEEecCC
Confidence 6899999999999999989988 666666654
No 90
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=86.32 E-value=0.76 Score=48.22 Aligned_cols=64 Identities=16% Similarity=0.183 Sum_probs=48.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCCCCCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHA------AGKTPAISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~------~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
++.++...+++.+|-+.-.++..++...- .... +..|+++||+|+-+.+.+++++.||+||.+.
T Consensus 290 s~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~--~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~ 359 (419)
T 4a2a_A 290 TAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGI--PGGVVLTGGGAKIPRINELATEVFKSPVRTG 359 (419)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------TTCEEEESGGGGSTTHHHHHHHHHTSCEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc--CCEEEEECchhchhhHHHHHHHHHCCCeEEE
Confidence 45555544778888888777777765532 1223 6789999999999999999999999999754
No 91
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=85.96 E-value=0.57 Score=51.63 Aligned_cols=63 Identities=16% Similarity=0.209 Sum_probs=46.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CCCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTP-AISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~-~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
++.++-.+++.+++.+.-.++..++ ..+..+ +++.|+++||+++.|.+.+++.+.||+++.+.
T Consensus 301 tr~~~e~l~~~~~~~i~~~v~~~L~---~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~ 364 (605)
T 4b9q_A 301 TRAKLESLVEDLVNRSIEPLKVALQ---DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKD 364 (605)
T ss_dssp EHHHHHHHHHHHHHHTTHHHHHHHH---HTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSS
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHH---HcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCC
Confidence 5666655477777777666665554 333321 27899999999999999999999999988654
No 92
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=85.91 E-value=0.9 Score=46.64 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=45.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhc-CCeeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVT-GCNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~~v~~~ 561 (564)
++.++-..++..++.+.-.++..++........ ++.|+++||+++.|.+.+.+.+.| +++|..+
T Consensus 311 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~--i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~ 375 (394)
T 3qfu_A 311 TRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKD--VDDIVLVGGSTRIPKVQQLLESYFDGKKASKG 375 (394)
T ss_dssp EHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGG--CCEEEEESGGGGSHHHHHHHHHHTTTCCCBCC
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CCEEEEECCccccHHHHHHHHHHcCCCCCCCC
Confidence 566664446666666665555555433211123 789999999999999999999999 8888765
No 93
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=84.77 E-value=0.93 Score=46.83 Aligned_cols=63 Identities=13% Similarity=0.136 Sum_probs=44.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CCCEEEEEcCCcccHHHHHHHhhhc-CCeeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTP-AISTLLVSGGLAKNPLYVQTHADVT-GCNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~-~~~~i~~~GG~a~s~~~~q~~Adv~-g~~v~~~ 561 (564)
++.++-..++.+++.+.-.++..++. .+..+ .++.|+++||+++.|.+.+.+.+.+ +.+|..+
T Consensus 319 ~r~~~~~~~~~~~~~i~~~i~~~l~~---~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~ 383 (404)
T 3i33_A 319 TRARFEELNADLFRGTLEPVEKALRD---AKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKS 383 (404)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHH---HTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH---cCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCC
Confidence 56666443556666665555555443 33211 2789999999999999999999999 7888665
No 94
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=84.42 E-value=1.6 Score=44.55 Aligned_cols=71 Identities=11% Similarity=0.111 Sum_probs=44.7
Q ss_pred EEEEEEeCccceEEEEEeCCCC--EEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGK--VSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT 78 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~--il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q 78 (564)
.++|||+|||++|++++. +|+ +......+++..--..|. -.|++.+.+++.+++++. +....+ ..+++++.
T Consensus 14 ~~vgiDiGt~~i~~~~~~-~~~~~i~~~g~~~~ps~~~~~g~-i~d~~~~~~~ik~~~~~~--~~~~~~-v~~~i~~~ 86 (377)
T 2ych_A 14 EALGLEIGASALKLVEVS-GNPPALKALASRPTPPGLLMEGM-VAEPAALAQEIKELLLEA--RTRKRY-VVTALSNL 86 (377)
T ss_dssp CCEEEEECSSEEEEEEEE-TTTTEEEEEEEEECCTTSEETTE-ESCHHHHHHHHHHHHHHH--TCCCCE-EEEEECGG
T ss_pred ceEEEEeCCCeEEEEEEe-CCceEEEEEEeEECCCCcccCCC-cCCHHHHHHHHHHHHHHc--CCCcce-EEEEecCC
Confidence 478999999999999996 555 444455544432222332 368888888877777763 332223 34666553
No 95
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=84.26 E-value=0.94 Score=45.78 Aligned_cols=32 Identities=31% Similarity=0.345 Sum_probs=28.3
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeecc
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIA 34 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~ 34 (564)
++|+||-||||+|+-++|.+|+++.+.+.+..
T Consensus 8 ~~IavDWGTSnlRa~l~~~~g~vl~~~~~~~G 39 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGEDGAVLAERRSAEG 39 (330)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCC
T ss_pred CEEEEEecchheehheecCCCCchhhhcCCcc
Confidence 78999999999999999999999998765543
No 96
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=83.48 E-value=1.2 Score=45.68 Aligned_cols=64 Identities=17% Similarity=0.213 Sum_probs=43.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCCCEEEEEcCCcccHHHHHHHhhhcCCeeeccC
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKT-PAISTLLVSGGLAKNPLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~-~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~ 562 (564)
++.++...++..++.+.-.++. .+++.+.. ..++.|+++||+++.|.+.+.+.+.|+.++.++.
T Consensus 301 t~~~~~~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~ 365 (383)
T 1dkg_D 301 TRAKLESLVEDLVNRSIELLKV---ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDV 365 (383)
T ss_dssp EHHHHHHHSHHHHHHHHHHHHH---HHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSS
T ss_pred eHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCc
Confidence 5666633345555555433333 34444432 1278999999999999999999999998876543
No 97
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=83.40 E-value=0.93 Score=46.99 Aligned_cols=61 Identities=13% Similarity=0.200 Sum_probs=42.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CCCEEEEEcCCcccHHHHHHHhhhcCCeee
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTP-AISTLLVSGGLAKNPLYVQTHADVTGCNVL 559 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~-~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~ 559 (564)
++.++-..++.+++.+.-.++..+ ++.+..+ .++.|+++||+++.|.+.+++.+.|+.++.
T Consensus 312 tr~~~~~~~~~~~~~i~~~i~~~l---~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~ 373 (409)
T 4gni_A 312 NRLRYETIARTVFEGFNRLVESAV---KKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTR 373 (409)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHH---HHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSE
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccc
Confidence 566664435566665554444444 3444321 278999999999999999999999998743
No 98
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=83.07 E-value=3.3 Score=41.91 Aligned_cols=60 Identities=12% Similarity=0.175 Sum_probs=48.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCCCEEEEEcCCcccHHHHHHHhhhc---CCeeeccC
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMH-AAGKTPAISTLLVSGGLAKNPLYVQTHADVT---GCNVLCPQ 562 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~-~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~~v~~~~ 562 (564)
.+.++ .+++.++++-.+...+.... +.+ +++|.++||.+.|..+++.+.+.+ |.+|.+++
T Consensus 221 ~~~di---Aasfq~~l~~~l~~~~~~a~~~~g----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~ 284 (334)
T 3eno_A 221 AIEDI---SYSIQETAFAMLVEVLERALYVSG----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTD 284 (334)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHT----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCC
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHHcC----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecC
Confidence 57888 66888888887777766543 344 569999999999999999999988 78888765
No 99
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=82.86 E-value=3.3 Score=40.64 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCCCEEEEEcCCcc
Q psy10531 495 SSETSLVTLYLATIQALAYGTRHIMDAMHAA-GKTPAISTLLVSGGLAK 542 (564)
Q Consensus 495 ~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~-g~~~~~~~i~~~GG~a~ 542 (564)
+|...| -..++-|.+..+..+++.+++. +. .-+|+++||.++
T Consensus 202 nT~~ai---~sGi~~g~~g~Ie~~i~~~~~e~~~---~~~vi~TGG~a~ 244 (271)
T 2f9w_A 202 ATAEAV---ERGCLLMLRGFVREQYAMACELLGP---DCEIFLTGGDAE 244 (271)
T ss_dssp SHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEESTTGG
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCC---CCEEEEECCCHH
Confidence 356666 5678888888888888888654 42 247999999875
No 100
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=82.71 E-value=3.3 Score=41.72 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=48.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCcccHHHHHHHhhhc---CCeeeccC
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLAKNPLYVQTHADVT---GCNVLCPQ 562 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~~v~~~~ 562 (564)
+++++ .+++.+.++-.+...++...+ .+ +++|.++||.+.|..+++.+.+.+ |.+|.+++
T Consensus 216 ~~~di---Aa~fq~~l~~~l~~~~~~~~~~~~----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~ 279 (330)
T 2ivn_A 216 RVEDL---AYSFQETAFAALVEVTERAVAHTE----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPP 279 (330)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHC----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCC
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecC
Confidence 57889 678888888877777766543 34 568999999999999999999887 77887764
No 101
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=82.21 E-value=4.9 Score=41.52 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=40.0
Q ss_pred CcEEEEEEeCccceEEEEEeCC-CCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcC--CCCCeEEEEE
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTR-GKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDV--NPAQIKGVGV 75 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~-G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~--~~~~I~aIgi 75 (564)
|+.+|.|..|+||+|..|||.+ .+++.+...+- +-. ..-.|-.+-.+.+.+.+++ .++ +..+|.+||.
T Consensus 22 m~~ILviN~GSSS~K~~l~~~~~~~~l~~g~~e~-ig~----~~~~dh~~a~~~il~~L~~--~~~~~~~~~i~aVGh 92 (398)
T 4ijn_A 22 MVTVLVVNSGSSSLKYAVVRPASGEFLADGIIEE-IGS----GAVPDHDAALRAAFDELAA--AGLHLEDLDLKAVGH 92 (398)
T ss_dssp CCEEEEEEECSSCEEEEEECTTTCCEEEEEEECS-TTB----TTBCSHHHHHHHHHHHHHH--TTCCGGGSCEEEEEE
T ss_pred cccEEEEeCCchhheEEEEECCCCceeeeeeeee-cCC----CCccCHHHHHHHHHHHHHH--cCCCccccceeEEec
Confidence 5679999999999999999975 44676664431 100 0122333333333333333 222 2368999974
No 102
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=81.37 E-value=3.5 Score=41.73 Aligned_cols=74 Identities=5% Similarity=0.077 Sum_probs=47.0
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccC-HHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQS-SEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT 78 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd-~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q 78 (564)
+++||||-.+..+-++|++ +|++++.....+. .+..|.+... ...-.+.+...+++++ +++..++|.+|+++..
T Consensus 6 M~iLgIdts~~~~svAl~~-~~~i~~~~~~~~~--~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~g 82 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIID-ESRILAMESSMYR--PKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMG 82 (334)
T ss_dssp CEEEEEECSSSEEEEEEEE-SSCCCEEEEEECC--CSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred ceEEEEECCCcCeEEEEEE-CCEEEEEEEEeec--cccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 5899999999899999998 5688876544332 2333433111 1122334455555555 4567789999999644
No 103
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=80.87 E-value=2.4 Score=43.35 Aligned_cols=63 Identities=17% Similarity=0.146 Sum_probs=49.8
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCCCEEEEEcC-CcccHHHHHHHhhhcC------CeeeccCC
Q psy10531 494 DSSETSLVTLYLATIQALAYGTRHIMDAM-HAAGKTPAISTLLVSGG-LAKNPLYVQTHADVTG------CNVLCPQE 563 (564)
Q Consensus 494 ~~~~~~~~~~~~A~~Egva~~~~~~~~~l-~~~g~~~~~~~i~~~GG-~a~s~~~~q~~Adv~g------~~v~~~~~ 563 (564)
..+++|+ .++++.+|+..+..+.-.. +..+ +++|+++|| .++|+..+++++..++ +++..++.
T Consensus 275 ~~~~eDI---a~gll~sVa~~I~~lA~l~A~~~~----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~ 345 (360)
T 2i7n_A 275 SISKEDL---ARATLVTITNNIGSIARMCALNEN----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEH 345 (360)
T ss_dssp TCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHT----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETT
T ss_pred CCCHHHH---HHHHHHHHHHHHHHHHHHHHHHcC----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCC
Confidence 4589999 8899999999987764322 2234 568999999 9999999999999984 67776654
No 104
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=80.13 E-value=3.8 Score=41.08 Aligned_cols=69 Identities=17% Similarity=0.292 Sum_probs=38.8
Q ss_pred EEEEEEeCccceEEEEEeCC-CC--EEEEEEeeccccCCCCCc---cccCHHHHHHHHHHHHHHHH---hcCCCCCeEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTR-GK--VSPIAVRPIALWCPKPQL---YEQSSEDIWNSVCLAIRDVT---KDVNPAQIKGV 73 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~-G~--il~~~~~~~~~~~~~~g~---~eqd~~~~~~~i~~~l~~l~---~~~~~~~I~aI 73 (564)
.+.+||+||.|+|..+++.+ +. ++...+.+..+ ..|- -..+++. .+..++++++.. .....++|.++
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrL---g~g~~~~g~ls~ea-i~r~~~~L~~f~~~~~~~~v~~i~~v 88 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSL---GTKVKETGRLQEDR-IEETIQVLKEYKKLIDEFKVERVKAV 88 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCT---TTTHHHHSSCCHHH-HHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeec---CCCccccCCcCHHH-HHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 57899999999999999974 42 33444443332 2221 1233333 344445555443 34444567766
Q ss_pred EE
Q psy10531 74 GV 75 (564)
Q Consensus 74 gi 75 (564)
+-
T Consensus 89 AT 90 (315)
T 1t6c_A 89 AT 90 (315)
T ss_dssp EC
T ss_pred Ec
Confidence 64
No 105
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=79.22 E-value=6 Score=39.60 Aligned_cols=73 Identities=8% Similarity=0.052 Sum_probs=41.0
Q ss_pred cEEEEEEeCccceEEEEEeCC-CC--EEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH---hcCCCCCeEEEEE
Q psy10531 2 EYLLSVDVGTSSVRAALVSTR-GK--VSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT---KDVNPAQIKGVGV 75 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~-G~--il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~---~~~~~~~I~aIgi 75 (564)
+.+.+||+||.|+|..+++.+ +. ++...+.+..+-..-...-..+++. .+.+++++++.. .....++|.+++-
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~ea-i~r~~~~L~~f~~~~~~~~v~~v~~vAT 82 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEA-MDRALDTLKKFRVILDEHAVVHVIATGT 82 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHH-HHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 468899999999999999864 43 3444444443321111111234433 344455555443 4445567777764
No 106
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=78.80 E-value=1.5 Score=43.45 Aligned_cols=25 Identities=8% Similarity=0.129 Sum_probs=21.2
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPI 28 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~ 28 (564)
+.+|||+|+|.+|++++ .+++++..
T Consensus 21 ~~iGIDiGsTt~K~V~~-~~~~i~~~ 45 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQE-QDNQRTFK 45 (287)
T ss_dssp CEEEEEECSSEEEEEEE-CSSCEEEE
T ss_pred eEEEEEEChhhEEEEEE-cCCEEEEE
Confidence 67999999999999999 46777754
No 107
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=78.24 E-value=6.3 Score=43.59 Aligned_cols=63 Identities=29% Similarity=0.303 Sum_probs=51.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCcccHHHHHHHhhhc-CCeeeccC
Q psy10531 494 DSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLAKNPLYVQTHADVT-GCNVLCPQ 562 (564)
Q Consensus 494 ~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~~v~~~~ 562 (564)
..+++++ .+++.++++-.+...++...+.. . +++|.++||.++|..+++.+...+ |.+|..+.
T Consensus 569 g~~~~dI---AasFh~ala~~L~~~~~ra~~~~-g--~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~ 632 (657)
T 3ttc_A 569 QAPVNQR---AWAFHDALAQGFAALMREQATMR-G--ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQ 632 (657)
T ss_dssp CCCHHHH---HHHHHHHHHHHHHHHHHHHHHTT-T--CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCC
T ss_pred CCCHHHH---HHHHHHHHHHHHHHHHHHHHHHc-C--CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecC
Confidence 3578899 77999999988888777654431 2 679999999999999999999988 88887764
No 108
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=77.04 E-value=9.5 Score=41.07 Aligned_cols=75 Identities=12% Similarity=0.097 Sum_probs=50.1
Q ss_pred cEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCH-HHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSS-EDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT 78 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~-~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q 78 (564)
+++||||-.+..+.++|++.++++++...... ..+..|-+-..+ ..-.+.+...+++++..+...+|.+|+++..
T Consensus 6 m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~--~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~~~~~~id~ia~~~g 81 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTSDGEVLFNKTIMY--KPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQG 81 (540)
T ss_dssp CEEEEEECSSSEEEEEEEETTSCEEEEEEEEC--CCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEE
T ss_pred ceEEEEEcCccceEEEEEECCCeEEEEEEEee--cCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCHhHCcEEEEecC
Confidence 68999999999999999998878988776543 233334332222 2334555566666653356678999988753
No 109
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=75.93 E-value=2.2 Score=46.05 Aligned_cols=57 Identities=12% Similarity=0.150 Sum_probs=38.7
Q ss_pred CcEEEEEEeCccceEEEEEeCC-C--CEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHH
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTR-G--KVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDV 61 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~-G--~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l 61 (564)
|+|+.|||||+|++.+++-+.+ | +++.+...++.=. .| ..++.+...+++.++++++
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi---KG-t~~Ni~g~~~si~~a~~~a 60 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM---KG-TRDNIAGTLAALEQALAKT 60 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS---TT-SGGGHHHHHHHHHHHHTTS
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc---ce-eeeCHHHHHHHHHHHHHHh
Confidence 8899999999999999987653 5 5677777765432 22 3467666666655555443
No 110
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=75.33 E-value=14 Score=38.08 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=40.2
Q ss_pred EEEEEEeCccceEEEEEeC-CCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEE
Q psy10531 3 YLLSVDVGTSSVRAALVST-RGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGV 75 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgi 75 (564)
.+|.|..|+||+|..|||. +.+++++..++ .+-.+. ..-.|-++-.+.+.+.+++.-...+..+|.+||.
T Consensus 13 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e-~ig~~~--~~~~~h~~a~~~il~~L~~~~~~~~~~~i~aVGh 83 (391)
T 3r9p_A 13 RVLVINSGSSSLKFQLVDPEFGVAASTGIVE-RIGEES--SPVPDHDAALRRAFDMLAGDGVDLNTAGLVAVGH 83 (391)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEC-CTTCTT--CSCCSHHHHHHHHHHHHHHTTCCTTTTTEEEEEE
T ss_pred eEEEEecCchhheeEEEecCCCceEEEEEEe-ecCCCc--cCccCHHHHHHHHHHHHHhcCCCCcccceeEEec
Confidence 4899999999999999997 45667766554 111110 1122334444444444433211123468999974
No 111
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=74.75 E-value=1.6 Score=42.74 Aligned_cols=105 Identities=8% Similarity=0.026 Sum_probs=66.9
Q ss_pred ccCchhHHHHHHHhhCCChHHHHHhhccCCchhHHHHHHHHHhhcccCCCCCceEEccCCCCCCCCCCCCCcccceeccC
Q psy10531 318 GQSATGKLLDHIINNHPATQSIMKKLNTEELAPVIQYLNHVIDTQHSTELTADFHVWPDFHGNRSPLADADMKGMICGLT 397 (564)
Q Consensus 318 ~~~~~G~~l~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 397 (564)
+..++|.+++|+.+.+.. .|+++++++.+.+ .|+.-+.|++ +-+.+.++++.
T Consensus 127 ca~GtG~~le~~a~~lg~---------------~~~el~~la~~~~----------~p~~~~~~c~---vfa~s~v~~l~ 178 (270)
T 1hux_A 127 CAAGTGRFLDVMANILEV---------------KVSDLAELGAKST----------KRVAISSTCT---VFAESEVISQL 178 (270)
T ss_dssp CCTTSHHHHHHHHHHHTC---------------CTTTHHHHHTTCC----------SCCCCCCCSH---HHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHhCC---------------CHHHHHHHHhhCC----------CCCCcccccc---hhHhHHHHHHh
Confidence 344668899999886431 2456666664432 2333444433 33566666666
Q ss_pred -CCCCchhHHHH-HHHHHHHHHhhhcc---cCccEEeccccch--hhhhhhhhcCCcceee
Q psy10531 398 -LDSSETSLVTL-YLATIQALADVTKD---VNPAQIKGVGVDA--TCSLVALDTNHQPLTI 451 (564)
Q Consensus 398 -~~~~~~~l~~~-~~~~i~~l~~~~~~---~~~~~~~ggg~~~--~~~~~a~~~~~~~~~~ 451 (564)
..++.+++++. +..+.+.+.++..+ .++|+++||+++| |+|++++.+| .||..
T Consensus 179 ~~g~~~~di~~av~e~Va~~i~~~~~~~~~~~~i~~~GG~a~n~~~~~~~~~~lg-~~v~~ 238 (270)
T 1hux_A 179 SKGTDKIDIIAGIHRSVASRVIGLANRVGIVKDVVMTGGVAQNYGVRGALEEGLG-VEIKT 238 (270)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHHTTCCCSSEEEESGGGGCHHHHHHHHHHHC-SCEEC
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCccccCHHHHHHHHHHHC-CCeEe
Confidence 66778888883 34444444444322 4789999999999 9999999998 45443
No 112
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=74.35 E-value=1.1 Score=45.84 Aligned_cols=23 Identities=13% Similarity=-0.034 Sum_probs=20.1
Q ss_pred cCccEEeccccch--hhhhhhhhcC
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDTN 445 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~~ 445 (564)
++.|.++||+++. +.+++....+
T Consensus 334 i~~IvL~GG~s~~p~l~~~l~~~~~ 358 (383)
T 1dkg_D 334 IDDVILVGGQTRMPMVQKKVAEFFG 358 (383)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHS
T ss_pred CCEEEEecCccccHHHHHHHHHHhC
Confidence 8999999999999 8888877665
No 113
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=74.26 E-value=2.6 Score=45.22 Aligned_cols=63 Identities=16% Similarity=0.184 Sum_probs=42.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCCCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKT-PAISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~-~~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
+++++-.++...++.+.-.++..+ ++.+.. ..++.|+++||+++.|.+.+.+.+.||+++.+.
T Consensus 270 tr~~fe~l~~~~~~~i~~~i~~~L---~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~ 333 (509)
T 2v7y_A 270 TRAKFEELSAHLVERTMGPVRQAL---QDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKG 333 (509)
T ss_dssp EHHHHHHHTHHHHHTTHHHHHHHH---HHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCC
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHH---HHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcC
Confidence 566664335555555544444443 333332 127899999999999999999999999887554
No 114
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=73.72 E-value=7.5 Score=39.43 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=39.4
Q ss_pred cEEEEEEeCccceEEEEEeCC--CCE--EEEEEeeccccCCCCCc---cccCHHHHHHHHHHHHHHHH---hcCCCCCeE
Q psy10531 2 EYLLSVDVGTSSVRAALVSTR--GKV--SPIAVRPIALWCPKPQL---YEQSSEDIWNSVCLAIRDVT---KDVNPAQIK 71 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~--G~i--l~~~~~~~~~~~~~~g~---~eqd~~~~~~~i~~~l~~l~---~~~~~~~I~ 71 (564)
+.+.+||+||.|+|..+++.+ |.+ +...+.... ...|- -..+++ -.+.+++++++.. ......+|.
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vr---Lg~g~~~~g~ls~e-ai~r~~~aL~~f~~~~~~~~v~~v~ 91 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIR---LGQDVDKTHRFADE-ALERAYVAAREFAGVIAEHPIDGLR 91 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCC---TTTTHHHHSSCCHH-HHHHHHHHHHHHHHHHTTSCCSEEE
T ss_pred CeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEee---CCCCccccCCcCHH-HHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 367899999999999999864 432 333333322 22221 123443 3445555555543 444445677
Q ss_pred EEEE
Q psy10531 72 GVGV 75 (564)
Q Consensus 72 aIgi 75 (564)
+++-
T Consensus 92 ~vAT 95 (343)
T 3cer_A 92 FVAT 95 (343)
T ss_dssp EEEC
T ss_pred EEec
Confidence 6664
No 115
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=72.15 E-value=1.9 Score=44.20 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=19.6
Q ss_pred cCccEEeccccch--hhhhhhhhc
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDT 444 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~ 444 (564)
++.|.++||+++. +.+++....
T Consensus 344 i~~VvLvGG~s~~p~l~~~l~~~~ 367 (394)
T 3qfu_A 344 VDDIVLVGGSTRIPKVQQLLESYF 367 (394)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHT
T ss_pred CCEEEEECCccccHHHHHHHHHHc
Confidence 8999999999999 888887766
No 116
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=70.50 E-value=16 Score=32.96 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=20.2
Q ss_pred EEEEEEeCccceEEEEEeCCCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGK 24 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~ 24 (564)
.+||||-|++.+=-+++|.+|+
T Consensus 2 rILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEECSS
T ss_pred EEEEEccccCceEEEEEEecCC
Confidence 4899999999999999999876
No 117
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=70.01 E-value=3.1 Score=46.40 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=43.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CCCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTP-AISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~-~~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
++.++-.++..+++.+.-.++.. |+..+..+ +++.|+++||+++.|.+.+.+.+.||+++...
T Consensus 302 tr~~fe~l~~~l~~~i~~~i~~~---L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~ 365 (675)
T 3d2f_A 302 SREELEELVKPLLERVTEPVTKA---LAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 365 (675)
T ss_dssp EHHHHHHHTHHHHTTTTHHHHHH---HHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECC
T ss_pred eHHHHHHHHHHHHHHHHHHHHHH---HHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCcccc
Confidence 56666443455555554444443 34444321 27899999999999999999999999988654
No 118
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=69.02 E-value=2.4 Score=43.86 Aligned_cols=23 Identities=9% Similarity=0.010 Sum_probs=20.7
Q ss_pred cCccEEeccccch--hhhhhhhhcC
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDTN 445 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~~ 445 (564)
++.|.++||+++. +.+++.+..+
T Consensus 345 i~~V~LvGG~s~~p~v~~~l~~~f~ 369 (409)
T 4gni_A 345 VDEVIMSGGTSNTPRIAANFRYIFP 369 (409)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHSC
T ss_pred CCEEEEECCccccHHHHHHHHHHcC
Confidence 8999999999999 8888888776
No 119
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=68.56 E-value=9.6 Score=40.86 Aligned_cols=72 Identities=17% Similarity=0.159 Sum_probs=43.4
Q ss_pred EEEEEEeCccceEEEEEeCC-C--CEEEEEEeeccccC--CCCCccccCHHHHHHHHHHHHHHHH---hcCCCCCeEEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTR-G--KVSPIAVRPIALWC--PKPQLYEQSSEDIWNSVCLAIRDVT---KDVNPAQIKGVG 74 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~-G--~il~~~~~~~~~~~--~~~g~~eqd~~~~~~~i~~~l~~l~---~~~~~~~I~aIg 74 (564)
.+.+||+||.|+|..+++.+ | +++...+.+..+-. ...| ..+++ -.+..++++++.. .+...++|.+++
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g--~Ls~e-ai~r~~~~L~~f~~~~~~~~v~~v~~vA 88 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDN--MLSEE-AMTRGLNCLSLFAERLQGFSPASVCIVG 88 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTC--CBCHH-HHHHHHHHHHHHHHHTTTCCGGGEEEEE
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccC--CcCHH-HHHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 57899999999999999974 3 23444444433221 1222 23443 3455556666543 445556788888
Q ss_pred EeC
Q psy10531 75 VDA 77 (564)
Q Consensus 75 is~ 77 (564)
-++
T Consensus 89 TsA 91 (513)
T 1u6z_A 89 THT 91 (513)
T ss_dssp CHH
T ss_pred cHH
Confidence 765
No 120
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=67.28 E-value=2.8 Score=46.06 Aligned_cols=23 Identities=13% Similarity=-0.034 Sum_probs=20.3
Q ss_pred cCccEEeccccch--hhhhhhhhcC
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDTN 445 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~~ 445 (564)
++.|.+|||+++. +.+++.+..|
T Consensus 334 i~~VvLvGG~sriP~v~~~l~~~fg 358 (605)
T 4b9q_A 334 IDDVILVGGQTRMPMVQKKVAEFFG 358 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHT
T ss_pred CcEEEEeCCccCchHHHHHHHHHhc
Confidence 8999999999999 8888877776
No 121
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=66.96 E-value=13 Score=41.73 Aligned_cols=61 Identities=15% Similarity=0.218 Sum_probs=48.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCCCEEEEEcCCcccHHHHHHHhhhc---CCeeeccC
Q psy10531 495 SSETSLVTLYLATIQALAYGTRHIMDAMH-AAGKTPAISTLLVSGGLAKNPLYVQTHADVT---GCNVLCPQ 562 (564)
Q Consensus 495 ~~~~~~~~~~~A~~Egva~~~~~~~~~l~-~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~~v~~~~ 562 (564)
.+++++ .+++.++++-.+....+... +.| +++|.++||.+.|..+++.+.+.+ |.++..++
T Consensus 664 ~~~~dI---AasFq~ala~~L~~~~~~a~~~~g----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~ 728 (761)
T 3vth_A 664 FEKSYI---SAKFHNTVVNFTYDLANLIRKETG----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNS 728 (761)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHHHHC----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECS
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHHhC----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecC
Confidence 467888 66888888888777776554 345 569999999999999999998886 78887654
No 122
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=66.84 E-value=6.2 Score=41.72 Aligned_cols=60 Identities=10% Similarity=0.081 Sum_probs=35.0
Q ss_pred cEEEEEEeCccceEEEEEeCCCC------EEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHH
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGK------VSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVT 62 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~------il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~ 62 (564)
+|.+.||+||+++|..|++.+.+ ++.... ...+..|.-.....+|+.+.+.+..+++.+.
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~-~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~ 99 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHS-SCDVQGGGISSYANDPSKAGQSLVRCLEQAL 99 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEE-EEECSSSCGGGGTTSTHHHHHHTHHHHHHHH
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeee-eeeecccccccccCCHHHHHHHHHHHHHHHH
Confidence 47889999999999999985321 332221 1111112111222467777777666666553
No 123
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=64.68 E-value=16 Score=39.35 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=46.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCCCEEEEEcCCcccHHHHHHHhhhc---CCeeeccC
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAM-HAAGKTPAISTLLVSGGLAKNPLYVQTHADVT---GCNVLCPQ 562 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l-~~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~~v~~~~ 562 (564)
+++++ .+++.+.++-.+....+.. +..+ +++|.++||.+.|..+++.+...+ |.++..++
T Consensus 220 ~~~~i---a~~fq~~~~~~l~~~~~~a~~~~~----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~ 283 (540)
T 3en9_A 220 RLEDI---CYSLQEYAFSMLTEITERALAHTN----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPP 283 (540)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHT----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCC
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCC
Confidence 57788 6788888887777666544 3444 569999999999999999998875 67777654
No 124
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=62.54 E-value=1.9 Score=41.08 Aligned_cols=23 Identities=26% Similarity=0.455 Sum_probs=11.6
Q ss_pred EEEEeCccce--------EEEEEeCCCCEEE
Q psy10531 5 LSVDVGTSSV--------RAALVSTRGKVSP 27 (564)
Q Consensus 5 LgIDiGTTsv--------Ka~l~d~~G~il~ 27 (564)
=|+|+||.++ |+++||.||+++.
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDlDGTLvD 39 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDLDGVITD 39 (250)
T ss_dssp ---------------CCCCEEEECTBTTTBC
T ss_pred ccccCCCCCcccCccchhheeeecCCCcccC
Confidence 4899999997 8999999998873
No 125
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=62.45 E-value=4.4 Score=43.42 Aligned_cols=23 Identities=4% Similarity=0.082 Sum_probs=20.3
Q ss_pred cCccEEeccccch--hhhhhhhhcC
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDTN 445 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~~ 445 (564)
++.|.++||+++. +.+++....+
T Consensus 303 i~~VvLvGG~s~~p~v~~~l~~~f~ 327 (509)
T 2v7y_A 303 IDKVILVGGSTRIPAVQEAIKRELG 327 (509)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHS
T ss_pred CcEEEEECCcccChHHHHHHHHHhC
Confidence 8999999999999 8888877665
No 126
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=61.37 E-value=6.1 Score=42.78 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=40.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CCCEEEEEcCCcccHHHHHHHhhhcC-Ceeecc
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKTP-AISTLLVSGGLAKNPLYVQTHADVTG-CNVLCP 561 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~-~~~~i~~~GG~a~s~~~~q~~Adv~g-~~v~~~ 561 (564)
++.++-.+...+++.+.-.++. .|+..+..+ +++.|+++||+++.|...+.+.+.|+ +++...
T Consensus 298 tr~~~e~l~~~~~~~i~~~i~~---~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~ 362 (554)
T 1yuw_A 298 TRARFEELNADLFRGTLDPVEK---ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKS 362 (554)
T ss_dssp EHHHHHHHTHHHHHHTTHHHHH---HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCC
T ss_pred EHHHHHHHHHHHHHHHHHHHHH---HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccC
Confidence 4555532244444444333333 344444321 27899999999999999999999996 776543
No 127
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=61.31 E-value=4.2 Score=44.06 Aligned_cols=23 Identities=13% Similarity=0.014 Sum_probs=20.2
Q ss_pred cCccEEeccccch--hhhhhhhhcC
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDTN 445 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~~ 445 (564)
++.|.++||+++. +.+++....+
T Consensus 331 i~~VvLvGG~srip~v~~~l~~~f~ 355 (554)
T 1yuw_A 331 IHDIVLVGGSTRIPKIQKLLQDFFN 355 (554)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTT
T ss_pred CcEEEEECCcccChHHHHHHHHHcC
Confidence 9999999999999 8888887664
No 128
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=61.03 E-value=3.7 Score=45.04 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=17.5
Q ss_pred CcEEEEEEeCccceEEEEEeCCCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGK 24 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~ 24 (564)
|..++|||+|||++++++++ +|+
T Consensus 1 m~~viGIDlGTt~s~va~~~-~g~ 23 (605)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIMD-GTT 23 (605)
T ss_dssp ---CEEEECCSSEEEEEEEE-TTE
T ss_pred CCCEEEEEcCCcCEEEEEEE-CCE
Confidence 66789999999999999986 453
No 129
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=60.80 E-value=19 Score=33.97 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=41.2
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT 78 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q 78 (564)
.+|+||-.|..+-++|++ +++++ +...... .+-.+.+...+.+++++. ++...+|.+|+++.-
T Consensus 13 ~iLaidTS~~~~sval~~-~~~~l-~~~~~~~---------r~Hse~L~p~i~~~L~~a--~~~~~dld~Iav~~G 75 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRK-GEDLF-EISYTGE---------KKHAEILPVVVKKLLDEL--DLKVKDLDVVGVGIG 75 (218)
T ss_dssp CEEEEEECSSSEEEEEEE-TTEEE-EEEEESC---------GGGGGHHHHHHHHHHHHH--TCCGGGCSEEEEECC
T ss_pred eEEEEEcCCcCeEEEEEE-CCEEE-EEEecch---------HHHHHHHHHHHHHHHHHc--CCCHHHCCEEEEEcC
Confidence 479999999999999998 56777 4322211 222334544555555443 456678999999754
No 130
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=60.79 E-value=8.4 Score=39.41 Aligned_cols=74 Identities=15% Similarity=0.237 Sum_probs=47.4
Q ss_pred CcEEEEEEeCcc--ceEEEEEeCCC--CEEEEEEeeccccC-------CCCCccccCHHH-------HHHHHHHHHHHHH
Q psy10531 1 MEYLLSVDVGTS--SVRAALVSTRG--KVSPIAVRPIALWC-------PKPQLYEQSSED-------IWNSVCLAIRDVT 62 (564)
Q Consensus 1 M~~~LgIDiGTT--svKa~l~d~~G--~il~~~~~~~~~~~-------~~~g~~eqd~~~-------~~~~i~~~l~~l~ 62 (564)
|+++||+=.||| ++-+++++.+| +++...++||+... -.++. .++++ +-+...+++++++
T Consensus 1 ~~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~~--~~~~~~~~l~~~lg~~~a~av~~~l 78 (371)
T 3qbx_A 1 MPRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGP--DEIARAAEVEQRWVALAAQGVRELL 78 (371)
T ss_dssp -CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCCB--THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999997 58888988776 57777788887210 11111 12222 2234556666665
Q ss_pred --hcCCCCCeEEEEEe
Q psy10531 63 --KDVNPAQIKGVGVD 76 (564)
Q Consensus 63 --~~~~~~~I~aIgis 76 (564)
.++++++|.+||.-
T Consensus 79 ~~~~~~~~~Id~IGsH 94 (371)
T 3qbx_A 79 LQQQMSPDEVRAIGSH 94 (371)
T ss_dssp HHTTCCGGGCCEEEEC
T ss_pred HHcCCCcccccEEEeC
Confidence 45667789999993
No 131
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=60.76 E-value=9.2 Score=36.03 Aligned_cols=63 Identities=11% Similarity=0.191 Sum_probs=41.4
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT 78 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q 78 (564)
.+|+||-.|..+-++|++ +|+++...... ..+..+.+...+.+++++ .++...+|.+|+++.-
T Consensus 3 ~iLaIdTS~~~~svAl~~-~~~~~~~~~~~----------~~~Hs~~L~p~i~~~L~~--a~~~~~dld~Iav~~G 65 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-NDQVISRSEVA----------PRDHTKKVLPMVDEVLKE--AGLTLQDLDALAFGRG 65 (213)
T ss_dssp CEEEEECSSSEEEEEEES-SSCEEEEEEEC----------CSCCHHHHHHHHHHHHHT--TTCCTTTCSEEEEEEE
T ss_pred EEEEEEccCcceEEEEEE-CCEEEEEEEec----------hHHHHHHHHHHHHHHHHH--cCCCHHHccEEEEecC
Confidence 589999999999999997 47887664211 123344454444444443 3566789999999643
No 132
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=60.47 E-value=4.1 Score=41.88 Aligned_cols=22 Identities=9% Similarity=-0.047 Sum_probs=19.4
Q ss_pred cCccEEeccccch--hhhhhhhhc
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDT 444 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~ 444 (564)
++.|.++||+++. +.+++.+..
T Consensus 352 i~~VvLvGG~s~~p~l~~~l~~~~ 375 (404)
T 3i33_A 352 IQEIVLVGGSTRIPKIQKLLQDFF 375 (404)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHT
T ss_pred CCEEEEECCccccHHHHHHHHHHc
Confidence 8999999999999 888887766
No 133
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=59.81 E-value=28 Score=31.01 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=20.8
Q ss_pred EEEEEEeCccceEEEEEeCCCCEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVS 26 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il 26 (564)
.+||||-|++++=-++++.+|+.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~ 25 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQL 25 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEE
T ss_pred EEEEEccCCCCeeEEEEEecCCeE
Confidence 489999999999999999888643
No 134
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=59.81 E-value=22 Score=36.08 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=18.0
Q ss_pred cEEEEEEeCccceEEEEEeC
Q psy10531 2 EYLLSVDVGTSSVRAALVST 21 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~ 21 (564)
+++++||+||+++|..|++.
T Consensus 3 ~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEE
Confidence 47899999999999999985
No 135
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=59.35 E-value=14 Score=39.46 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=41.7
Q ss_pred cEEEEEEeCccceEEEEEeCCC---CEEEEEEeeccccCCCCCc---cccCHHHHHHHHHHHHHHH---HhcCCCCCeEE
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRG---KVSPIAVRPIALWCPKPQL---YEQSSEDIWNSVCLAIRDV---TKDVNPAQIKG 72 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G---~il~~~~~~~~~~~~~~g~---~eqd~~~~~~~i~~~l~~l---~~~~~~~~I~a 72 (564)
+.+.+||+||.|+|..+++..+ +++...+....+ ..|- -..+++. .+..++++++. +.....++|.+
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrL---g~gl~~~g~Ls~ea-i~r~~~~L~~F~~~~~~~~v~~v~~ 90 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGL---GKGLALTGRMHEEG-VTRALMALRRFHVLSEQAQAQKLYV 90 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCT---TTTHHHHSSCCHHH-HHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeec---ccCccccCCcCHHH-HHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3578999999999999999753 344444433332 2221 1234433 34445555543 34555677887
Q ss_pred EEEe
Q psy10531 73 VGVD 76 (564)
Q Consensus 73 Igis 76 (564)
++-+
T Consensus 91 vATs 94 (508)
T 3hi0_A 91 LATA 94 (508)
T ss_dssp EECT
T ss_pred EeeH
Confidence 7753
No 136
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=58.89 E-value=14 Score=38.31 Aligned_cols=128 Identities=12% Similarity=0.110 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhhhcc-cCccEEe----ccccchhhhhhhhhcCCcceeeCCCCCCcccccCcceEEe-ecccCCCCCCCC
Q psy10531 408 LYLATIQALADVTKD-VNPAQIK----GVGVDATCSLVALDTNHQPLTISPTDTRHSTELTADFHVW-PDFHGNRSPLAD 481 (564)
Q Consensus 408 ~~~~~i~~l~~~~~~-~~~~~~~----ggg~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~gl~~~-P~~~G~r~P~~~ 481 (564)
.|+-+-+++++..|+ +++.+++ |+|+ ++|..- -| +.|-+ +.|+.=+ --++|.|+-..|
T Consensus 183 S~~yva~r~a~~lgk~~~~~~lIv~HLGnGa-Si~Ai~---~G-ksVDT-----------sMG~TpleGl~MgTRsGdiD 246 (408)
T 1g99_A 183 SHKYVAERAALMLGKPAEETKIITCHLGNGS-SITAVE---GG-KSVET-----------SMGFTPLEGLAMGTRCGSID 246 (408)
T ss_dssp HHHHHHHHHHHHHTSCGGGCEEEEEEESSSE-EEEEEE---TT-EEEEE-----------SCCSSTTSSSCCSSCCCSCC
T ss_pred hHHHHHHHHHHHhCCChhhCCEEEEEeCCcc-chhheE---CC-EEEEe-----------CCCCCCCCCCCCCCCCCCCC
Confidence 456667778888887 6666653 5554 444331 11 22221 2222100 014577877777
Q ss_pred CCc---------------------cccEecCCC-CCChhhHHHH-------HHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q psy10531 482 VDM---------------------KGMICGLTL-DSSETSLVTL-------YLATIQALAYGTRHIMDAMHAAGKTPAIS 532 (564)
Q Consensus 482 ~~~---------------------~g~~~Gl~~-~~~~~~~~~~-------~~A~~Egva~~~~~~~~~l~~~g~~~~~~ 532 (564)
|.. ++.++|++- +++-.++..+ .+-++|..+|.++..+-.|-..-.. ++
T Consensus 247 p~~l~~l~~~~~~s~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg--vD 324 (408)
T 1g99_A 247 PAIVPFLMEKEGLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNG--AD 324 (408)
T ss_dssp TTHHHHHHHHHTCCHHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTS--CS
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCC--CC
Confidence 753 445566665 6666666321 2338888999988887776553223 78
Q ss_pred EEEEEcCCc-ccHHHHHHHhhh
Q psy10531 533 TLLVSGGLA-KNPLYVQTHADV 553 (564)
Q Consensus 533 ~i~~~GG~a-~s~~~~q~~Adv 553 (564)
-|+++||.. +++..++.+.+-
T Consensus 325 aiVFTgGIGEns~~vR~~i~~~ 346 (408)
T 1g99_A 325 AVVFTAGIGENSASIRKRILTG 346 (408)
T ss_dssp EEEEEHHHHHHCHHHHHHHHTT
T ss_pred EEEECccccccCHHHHHHHHhh
Confidence 999999988 888888777543
No 137
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=58.55 E-value=3.8 Score=45.62 Aligned_cols=23 Identities=13% Similarity=0.001 Sum_probs=20.6
Q ss_pred cCccEEeccccch--hhhhhhhhcC
Q psy10531 423 VNPAQIKGVGVDA--TCSLVALDTN 445 (564)
Q Consensus 423 ~~~~~~~ggg~~~--~~~~~a~~~~ 445 (564)
++.|.++||+++. +.+++....|
T Consensus 335 I~~VvLvGGssriP~v~~~l~~~fg 359 (675)
T 3d2f_A 335 VDFVEIIGGTTRIPTLKQSISEAFG 359 (675)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHT
T ss_pred CcEEEEECCCccChHHHHHHHHhcC
Confidence 8999999999999 8888887777
No 138
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=58.43 E-value=19 Score=29.32 Aligned_cols=50 Identities=14% Similarity=0.131 Sum_probs=31.6
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHH
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDV 61 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l 61 (564)
|+ +||||+|+..+=.++-|..|.+-. |..+.. ..+.+..|+.+.+.+++-
T Consensus 1 mr-iLglD~G~kriGvAvsd~~~~~A~----pl~ti~------~~~~~~~~~~l~~li~e~ 50 (98)
T 1iv0_A 1 MR-VGALDVGEARIGLAVGEEGVPLAS----GRGYLV------RKTLEEDVEALLDFVRRE 50 (98)
T ss_dssp CC-EEEEEESSSEEEEEEECSCCSSCC----CEEEEE------CCCHHHHHHHHHHHHHHH
T ss_pred Cc-EEEEEeCCCEEEEEEEeCCCCeee----eeEEEE------ccCcHHHHHHHHHHHHHc
Confidence 44 799999999999999998775421 111111 114455666666666653
No 139
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=57.51 E-value=11 Score=35.89 Aligned_cols=63 Identities=14% Similarity=0.204 Sum_probs=40.8
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDVTKDVNPAQIKGVGVDAT 78 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l~~~~~~~~I~aIgis~q 78 (564)
++|+||--|..+-++|++ +|+++... .... ....+.+...+.+++++ .++...+|.+|+++.-
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~-~~~~---------~~h~~~l~~~i~~~L~~--a~~~~~did~Iav~~G 64 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF-ELCP---------REHTQRILPMVQEILAA--SGASLNEIDALAFGRG 64 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE-EECC---------SCCHHHHHHHHHHHHHH--TTCCGGGCSEEEEECC
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE-hhhh---------HHHHHHHHHHHHHHHHH--cCCCHHHCCEEEEEcC
Confidence 589999999999999998 56766422 1111 23334455555555544 3556678999999654
No 140
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=57.39 E-value=13 Score=38.21 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=26.5
Q ss_pred CcEEEEEEeCccceEEEEEeC-CCCEEEEEEee
Q psy10531 1 MEYLLSVDVGTSSVRAALVST-RGKVSPIAVRP 32 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~ 32 (564)
|+.+|.|..|+||+|..|||. +++++++..++
T Consensus 1 m~~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 33 (384)
T 3khy_A 1 MSEILVLNCGSSSVKFALINPHTSQSLVTGLAE 33 (384)
T ss_dssp CCEEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred CCEEEEEECCchhheEEEEecCCCceEEEEEEE
Confidence 778999999999999999997 55667766544
No 141
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=55.71 E-value=25 Score=37.82 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=47.0
Q ss_pred ccEecCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---CCCEEEEEcCCcccHHHHHHHhhhcCC-eeec
Q psy10531 486 GMICGLTLDSSETSLVTLYLATIQALAYGTRHIMDAMHAAGKTP---AISTLLVSGGLAKNPLYVQTHADVTGC-NVLC 560 (564)
Q Consensus 486 g~~~Gl~~~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~~---~~~~i~~~GG~a~s~~~~q~~Adv~g~-~v~~ 560 (564)
..+..+...++-++ .++.|--..-..|.. ..++.+......+ ++..|+++||+|+-+-..|+..++|+. +|.+
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv~-n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRi 579 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFVT-NALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVA 579 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHHH-HHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhH-HHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 56667754545666 343444433343432 2355554422111 148899999999999999999999999 8864
No 142
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=55.45 E-value=5.5 Score=39.93 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=41.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CC-C-CEEEEEcCCcccHHHHHHHhhhcCCeeeccC
Q psy10531 496 SETSLVTLYLATIQALAYGTRHIMDAMHAAGKT--PA-I-STLLVSGGLAKNPLYVQTHADVTGCNVLCPQ 562 (564)
Q Consensus 496 ~~~~~~~~~~A~~Egva~~~~~~~~~l~~~g~~--~~-~-~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~ 562 (564)
++.++...++..++.+.-.++..++ +.+.. .+ + +.|+++||+++.|.+.+.+.+.++.+|.++.
T Consensus 242 ~~~~~~~~~~~~~~~i~~~i~~~l~---~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~ 309 (344)
T 1jce_A 242 KGGEVREALRSVVVAIVESVRTTLE---KTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSE 309 (344)
T ss_dssp EHHHHHHHTHHHHHHHHHHHHHHHH---TSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECS
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHH---hCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccC
Confidence 4555533345555555544444443 22110 00 2 5799999999999999999999999887653
No 143
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=54.77 E-value=15 Score=38.06 Aligned_cols=45 Identities=7% Similarity=0.207 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCc-ccHHHHHHHhh
Q psy10531 506 ATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLA-KNPLYVQTHAD 552 (564)
Q Consensus 506 A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a-~s~~~~q~~Ad 552 (564)
-++|..+|.++..+-.|-. .+.. ++-|+++||.. +++.+++.+.+
T Consensus 316 lA~d~f~yri~k~IGa~aa~L~G~--vDaIVFTgGIGEns~~vR~~v~~ 362 (415)
T 3sk3_A 316 RAMDVYCHRLAKYIGSYTALMDGR--LDAVVFTGGIGENAAMVRELSLG 362 (415)
T ss_dssp HHHHHHHHHHHHHHHHGGGGSTTC--CCEEEEEHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--CCEEEECCccccCCHHHHHHHHh
Confidence 4688889999888877754 3545 78999999976 67777666544
No 144
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=54.61 E-value=6.9 Score=39.16 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=16.4
Q ss_pred CcEEEEEEeCccceEEEEEeCCC
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRG 23 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G 23 (564)
|+..+|||+|||++|+++. .+|
T Consensus 2 ~~~~igIDlGT~~s~v~~~-~~~ 23 (344)
T 1jce_A 2 LRKDIGIDLGTANTLVFLR-GKG 23 (344)
T ss_dssp --CEEEEEECSSEEEEEET-TTE
T ss_pred CCceEEEEcCcCcEEEEEC-CCC
Confidence 3568999999999999864 344
No 145
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=53.13 E-value=10 Score=37.55 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=23.2
Q ss_pred CCEEEEEcCCcccHHHHHHHhhhcCC---eeeccC
Q psy10531 531 ISTLLVSGGLAKNPLYVQTHADVTGC---NVLCPQ 562 (564)
Q Consensus 531 ~~~i~~~GG~a~s~~~~q~~Adv~g~---~v~~~~ 562 (564)
++.|+++||+|+- +.+.+.+.++. ++.++.
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~ 305 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTN 305 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCS
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCC
Confidence 7889999998864 78888888887 465543
No 146
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=52.84 E-value=28 Score=40.48 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=25.3
Q ss_pred EEEEEEeCc-----cceEEEEEeCCCCEEEEEEe
Q psy10531 3 YLLSVDVGT-----SSVRAALVSTRGKVSPIAVR 31 (564)
Q Consensus 3 ~~LgIDiGT-----TsvKa~l~d~~G~il~~~~~ 31 (564)
.+||||-|- +.+|++++|.+|+++.....
T Consensus 520 ~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i 553 (1030)
T 3psf_A 520 KILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 553 (1030)
T ss_dssp CEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEE
T ss_pred eEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEE
Confidence 589999984 48999999999999988765
No 147
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=51.10 E-value=45 Score=37.60 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=26.0
Q ss_pred EEEEEEeC-ccceEEEEEeCCCCEEEEEEe
Q psy10531 3 YLLSVDVG-TSSVRAALVSTRGKVSPIAVR 31 (564)
Q Consensus 3 ~~LgIDiG-TTsvKa~l~d~~G~il~~~~~ 31 (564)
.+||||-| .|.+|++++|.+|+++.....
T Consensus 330 ~vlg~dpg~r~g~k~a~vd~~G~~l~~~~i 359 (785)
T 3bzc_A 330 ATLGLDPGLRTGVKVAVVDATGKLLDTATV 359 (785)
T ss_dssp CEEEEECCSSSCEEEEEECTTSCEEEEEEE
T ss_pred eEEEECCCCcCceEEEEECCCCCEEEEEEE
Confidence 58999999 699999999999999988754
No 148
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=50.57 E-value=15 Score=40.25 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=28.4
Q ss_pred CCEEEEEcCCcccHHHHHHHhhhcCCeeecc
Q psy10531 531 ISTLLVSGGLAKNPLYVQTHADVTGCNVLCP 561 (564)
Q Consensus 531 ~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~ 561 (564)
++.|+++||+++.|...+.+.+.||+++...
T Consensus 334 i~~VvLvGG~srip~v~~~l~~~fg~~~~~~ 364 (605)
T 2kho_A 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKD 364 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHSSCCBCS
T ss_pred CceEEEECCcccChHHHHHHHHhcCCCcCcC
Confidence 8999999999999999999999999887543
No 149
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=49.39 E-value=18 Score=37.35 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=24.8
Q ss_pred CcEEEEEEeCccceEEEEEeCCCCEEEEEEee
Q psy10531 1 MEYLLSVDVGTSSVRAALVSTRGKVSPIAVRP 32 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~~G~il~~~~~~ 32 (564)
|+.+|.|..|+||+|..|||. .+++++..++
T Consensus 13 ~~~iLviN~GSSSlKf~l~~~-~~~l~~G~ve 43 (404)
T 4h0o_A 13 MSNVLIFNVGSSSLTYKVFCS-DNIVCSGKSN 43 (404)
T ss_dssp -CEEEEEEECSSCEEEEEEET-TEEEEEEEEC
T ss_pred cceEEEEECCchhheeeEeec-chhhhcceee
Confidence 678999999999999999998 6666655443
No 150
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=47.74 E-value=39 Score=36.66 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=43.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCCCEEEEEcCCcccHHHHHHHhhhcCC-eeecc
Q psy10531 495 SSETSLVTLYLATIQALAYGTRHIMDAMH-AAGKTPAISTLLVSGGLAKNPLYVQTHADVTGC-NVLCP 561 (564)
Q Consensus 495 ~~~~~~~~~~~A~~Egva~~~~~~~~~l~-~~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~-~v~~~ 561 (564)
....++ ..++.+.++-.+.+.+.... +.| +++|.++||.+.|..+++.+....+. .+.++
T Consensus 278 ~~~~dI---AasfQ~~l~~~L~~~~~~a~~~tg----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vp 339 (576)
T 3ven_A 278 YEYRDL---AATAQAALERAVFGLADSVLARTG----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVP 339 (576)
T ss_dssp GGGHHH---HHHHHHHHHHHHHHHHHHHHHHHT----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECC
T ss_pred cHHHHH---HHHHHHHHHHHHHHHHHHHHHHcC----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeC
Confidence 347888 56777777776666665543 344 67999999999999999998877664 55543
No 151
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=46.38 E-value=24 Score=37.16 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=35.1
Q ss_pred cEEEEEEeCccceEEEEEeCCC-----C-EEEEEEeeccccCCCCCc--cccCHHHHHHHHHHHHHHHH
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRG-----K-VSPIAVRPIALWCPKPQL--YEQSSEDIWNSVCLAIRDVT 62 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G-----~-il~~~~~~~~~~~~~~g~--~eqd~~~~~~~i~~~l~~l~ 62 (564)
+|.+.||+|+|++|..||.-+. . ++... ....+ ..||- ...+|+...+.+..+++.+.
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~-~~~k~--~gpGlSs~~~~p~~~~~~l~~Ll~~a~ 99 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQL-EECQV--KGPGISKYAQKTDEIAAYLAECMKMST 99 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEE-EEEEC--SSSCGGGGTTCGGGHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCcccccee-eeecc--cCCChhccCCCHHHHHHHHHHHHHHHH
Confidence 4788999999999999998532 1 22211 11111 12442 22377877777777776654
No 152
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=45.54 E-value=21 Score=37.20 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=25.7
Q ss_pred CcEEEEEEeCccceEEEEEeC-CCCEEEEEEee
Q psy10531 1 MEYLLSVDVGTSSVRAALVST-RGKVSPIAVRP 32 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~ 32 (564)
|+.+|.|..|+||+|..|||. +.+++++..++
T Consensus 5 ~~~ILviNaGSSSlKf~L~~~~~~~~l~~G~ve 37 (438)
T 4h0p_A 5 AEYLLAINCGSSSIKGKLFAIPSFELLANLAVT 37 (438)
T ss_dssp CEEEEEEEECSSCEEEEEEEETTTEEEEEEEEE
T ss_pred CCEEEEEECCcccceeEEEEcCCCCeeeEEEEe
Confidence 357899999999999999996 56677766544
No 153
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=43.83 E-value=23 Score=36.56 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=25.4
Q ss_pred cEEEEEEeCccceEEEEEeC-CCCEEEEEEeec
Q psy10531 2 EYLLSVDVGTSSVRAALVST-RGKVSPIAVRPI 33 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~ 33 (564)
+.+|.|..|+||+|..|||. +.+++.+..++.
T Consensus 1 M~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 1 MRVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp CEEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred CeEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 15899999999999999996 456777766553
No 154
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=43.16 E-value=37 Score=40.21 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=25.4
Q ss_pred EEEEEEeCc-----cceEEEEEeCCCCEEEEEEe
Q psy10531 3 YLLSVDVGT-----SSVRAALVSTRGKVSPIAVR 31 (564)
Q Consensus 3 ~~LgIDiGT-----TsvKa~l~d~~G~il~~~~~ 31 (564)
.+||||-|- +.+|++++|.+|+++.....
T Consensus 517 ~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i 550 (1219)
T 3psi_A 517 KILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKI 550 (1219)
T ss_dssp CEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEE
T ss_pred eEEEecCCCCCCCCCceEEEEECCCCCEEEEEEE
Confidence 589999984 48999999999999988765
No 155
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=42.94 E-value=39 Score=38.03 Aligned_cols=61 Identities=25% Similarity=0.273 Sum_probs=45.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEcCCcccHHHHHHHhhhc---CCeeecc
Q psy10531 494 DSSETSLVTLYLATIQALAYGTRHIMDAMHA-AGKTPAISTLLVSGGLAKNPLYVQTHADVT---GCNVLCP 561 (564)
Q Consensus 494 ~~~~~~~~~~~~A~~Egva~~~~~~~~~l~~-~g~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~~v~~~ 561 (564)
..+++++ ..++.+.++-.+.+.+..+.+ .| ++.|.++||.+.|..+++.+.+.+ |.+|.++
T Consensus 675 ~~~~~dI---AasfQ~al~~~L~~~~~~a~~~tg----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p 739 (772)
T 4g9i_A 675 GASPADI---AYSAHLALARAFAHTAVERAREFG----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVT 739 (772)
T ss_dssp TSCHHHH---HHHHHHHHHHHHHHHHHHHHHTTT----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCC
T ss_pred CCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhC----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEcc
Confidence 3467888 667777777777666665544 34 678999999999999999988775 5566554
No 156
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=37.44 E-value=55 Score=32.48 Aligned_cols=55 Identities=9% Similarity=0.175 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCC-CCEEEEEcCCcccHHHHHHHhhhcCCeeeccCC
Q psy10531 504 YLATIQALAYGTRHIMDAMHAAGKTPA-ISTLLVSGGLAKNPLYVQTHADVTGCNVLCPQE 563 (564)
Q Consensus 504 ~~A~~Egva~~~~~~~~~l~~~g~~~~-~~~i~~~GG~a~s~~~~q~~Adv~g~~v~~~~~ 563 (564)
++.+++-.+ ..+++.+++.+.++. ++.|+++||+|.- +.+.+.+.++.++.++++
T Consensus 254 i~~~~~e~~---~~I~~~i~~~~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~ 309 (329)
T 4apw_A 254 IKKVKEKFL---KDAIKLIEKRGFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNN 309 (329)
T ss_dssp HHHHHHHHH---HHHHHHHHHHTCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSS
T ss_pred HHHHHHHHH---HHHHHHHHHcCCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecCC
Confidence 344444333 344444443333332 5789999999974 568999999988887653
No 157
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=36.28 E-value=1.1e+02 Score=31.13 Aligned_cols=72 Identities=21% Similarity=0.306 Sum_probs=47.2
Q ss_pred EEEEEEeCcc--ceEEEEEeCCCC---EEEEEEeeccccC-------CCCCccccCHH-------HHHHHHHHHHHHHH-
Q psy10531 3 YLLSVDVGTS--SVRAALVSTRGK---VSPIAVRPIALWC-------PKPQLYEQSSE-------DIWNSVCLAIRDVT- 62 (564)
Q Consensus 3 ~~LgIDiGTT--svKa~l~d~~G~---il~~~~~~~~~~~-------~~~g~~eqd~~-------~~~~~i~~~l~~l~- 62 (564)
++||+=.||| .+-+++++.+|+ ++...++||+... -.++ ..+.+ ++-+...+++++++
T Consensus 6 ~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~--~~~~~~~~~l~~~lg~~~a~av~~~l~ 83 (370)
T 3cqy_A 6 YYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPG--TDEINRLGRLDRSVGKLFALAVNNLLA 83 (370)
T ss_dssp EEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTT--SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999998 489999998764 6777888887211 1111 11111 12234556666665
Q ss_pred -hcCCCCCeEEEEEe
Q psy10531 63 -KDVNPAQIKGVGVD 76 (564)
Q Consensus 63 -~~~~~~~I~aIgis 76 (564)
.++++++|.+||.-
T Consensus 84 ~~~~~~~~i~~IGsH 98 (370)
T 3cqy_A 84 KTKIAKDEIIAIGSH 98 (370)
T ss_dssp HHCCCGGGEEEEEEE
T ss_pred HcCCCcccccEEEeC
Confidence 46677899999993
No 158
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=35.74 E-value=45 Score=34.51 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=26.4
Q ss_pred cEEEEEEeCccceEEEEEeC-CCCEEEEEEeec
Q psy10531 2 EYLLSVDVGTSSVRAALVST-RGKVSPIAVRPI 33 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~ 33 (564)
+.+|.|..|+||+|..|||. +.+++.+..++.
T Consensus 18 ~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 50 (415)
T 2e1z_A 18 PVVLVINCGSSSIKFSVLDVATCDVLMAGIADG 50 (415)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEES
T ss_pred CeEEEEECCchhheEEEEECCCCCEEEEEEEEe
Confidence 36899999999999999996 457787776654
No 159
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=34.51 E-value=65 Score=31.63 Aligned_cols=23 Identities=17% Similarity=0.463 Sum_probs=19.8
Q ss_pred EEEEEeCccceEEEEEeCCCCEE
Q psy10531 4 LLSVDVGTSSVRAALVSTRGKVS 26 (564)
Q Consensus 4 ~LgIDiGTTsvKa~l~d~~G~il 26 (564)
.+|||+||+++|++..+.+|++.
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEE
T ss_pred eEEEecCCccceEEEecCCCEEE
Confidence 68999999999999877788754
No 160
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=32.94 E-value=41 Score=29.21 Aligned_cols=24 Identities=25% Similarity=0.279 Sum_probs=21.2
Q ss_pred cEEEEEEeCccceEEEEEeCCCCE
Q psy10531 2 EYLLSVDVGTSSVRAALVSTRGKV 25 (564)
Q Consensus 2 ~~~LgIDiGTTsvKa~l~d~~G~i 25 (564)
..+||||+|+..+=.++-|..+.+
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~~ 26 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITGT 26 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTTE
T ss_pred CeEEEEEeCCCEEEEEEEcCCCCE
Confidence 478999999999999999997654
No 161
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=31.88 E-value=78 Score=32.37 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=54.1
Q ss_pred ccCCCCCCCCCCc---------------------cccEecCCCCCChhhHHHH-------HHHHHHHHHHHHHHHHHHHH
Q psy10531 472 FHGNRSPLADVDM---------------------KGMICGLTLDSSETSLVTL-------YLATIQALAYGTRHIMDAMH 523 (564)
Q Consensus 472 ~~G~r~P~~~~~~---------------------~g~~~Gl~~~~~~~~~~~~-------~~A~~Egva~~~~~~~~~l~ 523 (564)
++|.|+=..||.. ++.++|++-+++-.++..+ .+-++|..+|.++..+-.|-
T Consensus 229 ~mgtRsG~iDp~~~~~l~~~~~~s~~ei~~~Lnk~sGLlg~sGs~D~R~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~a 308 (384)
T 3khy_A 229 VMGTRSGCIDPSIFAYISDNLGWSVTEITNMLNKQSGLLGICGHNDMREVSQLAAKGDSLAKLAIEIFSHRVAKFVASYM 308 (384)
T ss_dssp CCSSCCCSCCTTHHHHHHHHHCCCHHHHHHHHHHSCHHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCCCCCCCChHHHHHHHHhcCCCHHHHHHHHhcccceEEecCCCcHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678877777763 4556777766666665321 34578888898888877775
Q ss_pred Hc-CCCCCCCEEEEEcCCc-ccHHHHHHHhh
Q psy10531 524 AA-GKTPAISTLLVSGGLA-KNPLYVQTHAD 552 (564)
Q Consensus 524 ~~-g~~~~~~~i~~~GG~a-~s~~~~q~~Ad 552 (564)
.. + . ++-|+++||.. .++..++.+.+
T Consensus 309 a~L~-g--vDaIVFTgGIgEns~~iR~~i~~ 336 (384)
T 3khy_A 309 IYFN-K--LDALVFTGGIGENAANIRKNIIS 336 (384)
T ss_dssp GGCS-S--CCEEEEEHHHHHHCHHHHHHHHH
T ss_pred HHhC-C--CCEEEECCccccCcHHHHHHHHh
Confidence 53 4 4 89999999988 66767765543
No 162
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=31.52 E-value=52 Score=34.01 Aligned_cols=31 Identities=16% Similarity=0.301 Sum_probs=25.0
Q ss_pred EEEEEEeCccceEEEEEeC-CCCEEEEEEeec
Q psy10531 3 YLLSVDVGTSSVRAALVST-RGKVSPIAVRPI 33 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~-~G~il~~~~~~~ 33 (564)
.+|.|..|+||+|..|||. +.+++.+..++.
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 33 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLCER 33 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEEEe
Confidence 4799999999999999996 456777766553
No 163
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=28.86 E-value=57 Score=28.50 Aligned_cols=35 Identities=9% Similarity=0.237 Sum_probs=30.2
Q ss_pred ccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC
Q psy10531 44 EQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT 78 (564)
Q Consensus 44 eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q 78 (564)
+-+++++++++.+.+.+++ .++++++|.+|-||..
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4678899999999999998 6788899999999754
No 164
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=28.11 E-value=32 Score=34.55 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=18.0
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEE
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSP 27 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~ 27 (564)
..+|||+||+++|+.. .+|.++.
T Consensus 22 ~~igiDlG~~~tkv~~--~~g~~~~ 44 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG--VDGKRII 44 (346)
T ss_dssp EEEEEEECSSEEEEEC--GGGCEEE
T ss_pred EEEEEecCCcceeEEe--cCCCEEE
Confidence 5789999999999884 4566553
No 165
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=26.75 E-value=68 Score=27.38 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=30.1
Q ss_pred ccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEEeCC
Q psy10531 44 EQSSEDIWNSVCLAIRDVT--KDVNPAQIKGVGVDAT 78 (564)
Q Consensus 44 eqd~~~~~~~i~~~l~~l~--~~~~~~~I~aIgis~q 78 (564)
+-+++++++++.+.+.+++ .++++++|.+|-||..
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 4578899999999999998 6788899999999754
No 166
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=25.17 E-value=55 Score=32.44 Aligned_cols=30 Identities=20% Similarity=0.217 Sum_probs=26.0
Q ss_pred EEEEEeCccceEEEEEeCCCCEEEEEEeecc
Q psy10531 4 LLSVDVGTSSVRAALVSTRGKVSPIAVRPIA 34 (564)
Q Consensus 4 ~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~ 34 (564)
.|.+|+|+.|+-.++++ ++++....+.|+.
T Consensus 133 ~lviDIGGGStEl~~~~-~~~~~~~~Sl~lG 162 (315)
T 3mdq_A 133 SLAMDIGGGSVEFIIGN-KNEILWKQSFEIG 162 (315)
T ss_dssp EEEEEECSSCEEEEEEC-SSCEEEEEEESCC
T ss_pred EEEEEeCCCceEEEEEE-CCeEeeeEEEech
Confidence 57899999999999997 6788888888875
No 167
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=24.95 E-value=1.6e+02 Score=31.70 Aligned_cols=57 Identities=23% Similarity=0.324 Sum_probs=35.6
Q ss_pred CcEEEEEEeCccceEEEEEe--CCC--CEEEEEEeeccccCCCCCccccCHHHHHHHHHHHHHHH
Q psy10531 1 MEYLLSVDVGTSSVRAALVS--TRG--KVSPIAVRPIALWCPKPQLYEQSSEDIWNSVCLAIRDV 61 (564)
Q Consensus 1 M~~~LgIDiGTTsvKa~l~d--~~G--~il~~~~~~~~~~~~~~g~~eqd~~~~~~~i~~~l~~l 61 (564)
|+|+.|||+|.+++-++|-+ .+| +.+.+...++.-. .| -.|+..-+.+++.++++++
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~ttg~---kg-t~~n~~g~~~~l~~~~~~~ 61 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAETTGI---KG-TLRNVFGIQEALALVARGA 61 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECCSS---TT-STTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeeccccccCCc---cC-cHHHHHHHHHHHHHHHHHc
Confidence 88999999998888777644 345 4555555554321 12 2456556666666666554
No 168
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=24.80 E-value=88 Score=26.52 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=30.0
Q ss_pred ccCHHHHHHHHHHHHHHHH--hcCCC-CCeEEEEEeCC
Q psy10531 44 EQSSEDIWNSVCLAIRDVT--KDVNP-AQIKGVGVDAT 78 (564)
Q Consensus 44 eqd~~~~~~~i~~~l~~l~--~~~~~-~~I~aIgis~q 78 (564)
+-+++++++++.+.+.+++ .++++ ++|.+|-||..
T Consensus 13 ~n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 13 EDTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 4578899999999999998 67888 89999999754
No 169
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=23.52 E-value=26 Score=29.42 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=27.0
Q ss_pred HHHH-HHHHHhCChhHHhhhccccchhhHHHHhhh
Q psy10531 139 TPKL-LWLKKNLPDTCWRRAGLFFDLPDFLTWKLT 172 (564)
Q Consensus 139 ~~kl-~Wl~~~~~Pe~~~~~~~~l~~~dyl~~~LT 172 (564)
..|+ .||++|. .+++.|...-..=.|||.|.+|
T Consensus 78 ~akvekwf~rnc-~~v~gr~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNC-NSVIGRDCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHH-HHHHSSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhh-hHHHcccCCHHHHHHHHHHHHh
Confidence 3454 4999999 9999988877777899999886
No 170
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=22.01 E-value=87 Score=30.96 Aligned_cols=73 Identities=18% Similarity=0.127 Sum_probs=42.9
Q ss_pred EEEEEEeCccceEEEEEeCCCCEEEEEEeeccccCCCCCcc---ccCHHHHHHHHHHHHHHHHhcCCCCC-eEEEEEeCC
Q psy10531 3 YLLSVDVGTSSVRAALVSTRGKVSPIAVRPIALWCPKPQLY---EQSSEDIWNSVCLAIRDVTKDVNPAQ-IKGVGVDAT 78 (564)
Q Consensus 3 ~~LgIDiGTTsvKa~l~d~~G~il~~~~~~~~~~~~~~g~~---eqd~~~~~~~i~~~l~~l~~~~~~~~-I~aIgis~q 78 (564)
-.+.+|+|+.|+-.++++ +++++...+.|+...+-...+. ..+++ -++.+.+.+++.+... ..+ -..||+++.
T Consensus 139 ~~lvvDIGGGStEl~~~~-~~~~~~~~Sl~~G~v~l~e~~~~~~~~~~~-~~~~~~~~i~~~l~~~-~~~~~~lig~gGt 215 (315)
T 1t6c_A 139 EVCVVDQGGGSTEYVFGK-GYKVREVISLPIGIVNLTETFFKQDPPTEE-EVKRFFEFLEKELSKV-KKPVDTIVGLGGT 215 (315)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECCCHHHHHHHHCCSSSCCHH-HHHHHHHHHHHHHTTT-CCCCSEEEEESHH
T ss_pred CEEEEEeCCCcEEEEEEe-CCceeeEEEEeccHHHHHHHhccCCCCCHH-HHHHHHHHHHHHHHHH-HhhcCEEEEECcH
Confidence 368899999999999987 5777777777765322111000 12333 3556666666666332 111 246777554
No 171
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=21.86 E-value=73 Score=32.96 Aligned_cols=46 Identities=13% Similarity=0.205 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEcCCc-ccHHHHHHHhhh
Q psy10531 506 ATIQALAYGTRHIMDAMHAAGKTPAISTLLVSGGLA-KNPLYVQTHADV 553 (564)
Q Consensus 506 A~~Egva~~~~~~~~~l~~~g~~~~~~~i~~~GG~a-~s~~~~q~~Adv 553 (564)
-++|..+|.++..+-.|-..-.. ++-|+++||.. .|+..++.+.+-
T Consensus 308 lA~d~f~yri~k~IGa~aa~Lgg--vDaIVFTgGIGEns~~vR~~i~~~ 354 (415)
T 2e1z_A 308 LAIKTFVHRIARHIAGHAASLHR--LDGIIFTGGIGENSVLIRQLVIEH 354 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSS--CCEEEEEHHHHHHCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CCEEEECccccccCHHHHHHHHhh
Confidence 47888999998888777654223 78999999988 888888777543
Done!