Query psy10534
Match_columns 286
No_of_seqs 137 out of 1066
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 20:45:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10534.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10534hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kf6d_ f.21.2.2 (D:) Fumarate 8.3 29 0.0021 26.0 -0.6 12 43-54 75-86 (119)
2 d1k8ua_ a.39.1.2 (A:) Calcycli 5.4 41 0.003 23.2 -1.1 52 53-107 16-71 (89)
3 d1ofcx1 a.4.1.3 (X:799-850) SA 4.9 2.6E+02 0.019 17.3 2.9 25 215-239 9-39 (52)
4 d1nira1 a.3.1.2 (A:6-117) N-te 4.0 3.5E+02 0.025 18.4 3.4 43 234-279 68-112 (112)
5 d1tl2a_ b.67.1.1 (A:) Tachylec 3.9 67 0.0049 26.4 -1.0 38 154-196 148-187 (235)
6 d2gxba1 a.4.5.19 (A:140-198) Z 3.8 1.7E+02 0.012 19.0 1.2 20 216-235 4-32 (59)
7 d3cr5x1 a.39.1.2 (X:0-89) Calc 3.7 64 0.0047 22.4 -1.1 53 52-107 15-73 (90)
8 d1sfua_ a.4.5.19 (A:) 34L {Yab 3.7 2.1E+02 0.016 19.0 1.7 34 211-245 7-52 (70)
9 d1xk4c1 a.39.1.2 (C:4-86) Calc 3.6 66 0.0048 22.0 -1.1 53 52-107 16-75 (83)
10 d5easa1 a.102.4.1 (A:24-220) 5 3.5 1.9E+02 0.014 22.7 1.6 16 215-230 46-61 (197)
No 1
>d1kf6d_ f.21.2.2 (D:) Fumarate reductase subunit FrdD {Escherichia coli [TaxId: 562]}
Probab=8.26 E-value=29 Score=26.03 Aligned_cols=12 Identities=42% Similarity=0.731 Sum_probs=10.1
Q ss_pred hhhhhhcccccC
Q psy10534 43 FNWVRDHRVHHK 54 (286)
Q Consensus 43 ~~Wv~~HR~HHk 54 (286)
--|...||.||.
T Consensus 75 plWh~~HRihHg 86 (119)
T d1kf6d_ 75 PLWCGLHRMHHA 86 (119)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 459999999984
No 2
>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}
Probab=5.43 E-value=41 Score=23.16 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=27.5
Q ss_pred cCCCCCCCCCCCcc----cchHHhhhhhhhhccChhHHHhcccCCCccccCCceEEeeh
Q psy10534 53 HKYSETDADPHNSK----RGFFFAHVGWLMCRKHKDVIEKGRMVDMSDVMADPLVRFHE 107 (286)
Q Consensus 53 Hk~sDtd~DPHs~~----rGf~~sH~GWll~~~~p~~~~~~~~~d~~DL~~Dp~v~fq~ 107 (286)
|+|+|+|+|...-. +-+.=+-..=......+++.+..+ .-|...|--|-|.+
T Consensus 16 ~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~---~lD~d~Dg~IdF~E 71 (89)
T d1k8ua_ 16 HKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLME---DLDRNKDQEVNFQE 71 (89)
T ss_dssp HHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHH---HHHHTTTCEEEHHH
T ss_pred HHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHH---HhcCCCCCCCcHHH
Confidence 78999999998653 222222111001122333333222 23667888888877
No 3
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=4.95 E-value=2.6e+02 Score=17.35 Aligned_cols=25 Identities=28% Similarity=0.191 Sum_probs=17.3
Q ss_pred HHHHHHHHhc------ccccccCCCHHHHHH
Q psy10534 215 FFIDFFAKIG------WAYDRKQPSATLVRN 239 (286)
Q Consensus 215 ~~I~~l~~LG------La~dlk~~~~~~i~~ 239 (286)
-||+++++-| +|.++..-+++.|++
T Consensus 9 ~Fi~a~ekyGR~d~~~Ia~e~~~Kt~eEV~~ 39 (52)
T d1ofcx1 9 QFIKANEKYGRDDIDNIAKDVEGKTPEEVIE 39 (52)
T ss_dssp HHHHHHHHHCTTCHHHHTTSSTTCCHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHhcCCCHHHHHH
Confidence 4789999988 466666556666654
No 4
>d1nira1 a.3.1.2 (A:6-117) N-terminal (heme c) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=4.01 E-value=3.5e+02 Score=18.40 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=21.6
Q ss_pred HHHHHHHhhhcC-CCCCCCCCCCCCCCCChhhhccce-ecccCCCCCC
Q psy10534 234 ATLVRNTALRHG-DGSHCEVPPEADKADCNQNCAAVT-NLNLTPNLPP 279 (286)
Q Consensus 234 ~~~i~~~~~r~g-d~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 279 (286)
.+.|.+.+ +.| .+..| .||. ...++++|+.++. .+--+++.||
T Consensus 68 ~~~l~~~I-~~G~~~~MP-~~~~-~~~Lsd~ei~~l~~Yv~~~~~~pP 112 (112)
T d1nira1 68 QQYLEALI-TYGTPLGMP-NWGS-SGELSKEQITLMAKYIQHTPPQPP 112 (112)
T ss_dssp HHHHHHHH-HHCCSSSCC-CSTT-TTSSCHHHHHHHHHHTTSCCCBCC
T ss_pred hhhhhhhh-hhcccccCC-Cccc-cCCCCHHHHHHHHHHHHHCCCCCC
Confidence 34444443 333 34553 4431 2458888888876 3333344443
No 5
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=3.86 E-value=67 Score=26.39 Aligned_cols=38 Identities=18% Similarity=0.532 Sum_probs=23.6
Q ss_pred hhcccccccccCCCCCCCCCCccchHHHHH-hcC-CCCCCCCCCC
Q psy10534 154 WAVNSAAHIWGNKPFDRRIMPAENKLVSIL-ALG-EGWHNYHHVF 196 (286)
Q Consensus 154 w~VNS~~H~~G~rpy~~~~~s~nn~~vall-t~G-EGwHNnHHaf 196 (286)
|+|+|--=+-|..| ..+|..+++.- ++| ++||++|+.+
T Consensus 148 YaV~~~~l~k~~pP-----~~~~d~WL~~st~igr~~w~~~~fi~ 187 (235)
T d1tl2a_ 148 YAVHGQQFYKALPP-----VSNQDNWLARATKIGQGGWDTFKFLF 187 (235)
T ss_dssp EEEETTEEEEECCC-----SSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred EEEECCcEEEcCCC-----CCCCchhhhhhhhhccCcccCceEEE
Confidence 45555554556655 34455566553 455 9999999765
No 6
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.84 E-value=1.7e+02 Score=18.97 Aligned_cols=20 Identities=15% Similarity=0.413 Sum_probs=11.6
Q ss_pred HHHHHHHhc---------ccccccCCCHH
Q psy10534 216 FIDFFAKIG---------WAYDRKQPSAT 235 (286)
Q Consensus 216 ~I~~l~~LG---------La~dlk~~~~~ 235 (286)
++.+|..|| ||+.++.|..+
T Consensus 4 vl~~l~~lg~~~~~tA~~LA~kl~vpKk~ 32 (59)
T d2gxba1 4 ILKFLEELGEGKATTAHDLSGKLGTPKKE 32 (59)
T ss_dssp HHHHHHHHCTTCCBCHHHHHHHHTCCHHH
T ss_pred HHHHHHhcCCccchhHHHHHHHhCCcHHH
Confidence 345566666 66666665443
No 7
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}
Probab=3.73 E-value=64 Score=22.36 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=29.9
Q ss_pred ccCCCCCCCCCCCcccchHHh----hhhhhhh-ccChhH-HHhcccCCCccccCCceEEeeh
Q psy10534 52 HHKYSETDADPHNSKRGFFFA----HVGWLMC-RKHKDV-IEKGRMVDMSDVMADPLVRFHE 107 (286)
Q Consensus 52 HHk~sDtd~DPHs~~rGf~~s----H~GWll~-~~~p~~-~~~~~~~d~~DL~~Dp~v~fq~ 107 (286)
=|+||.+++|++.-.++=+-. -++=.+. .+.|+. .+.. ..=|...|--|-|++
T Consensus 15 FhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m---~~LD~n~Dg~vdF~E 73 (90)
T d3cr5x1 15 FHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVM---ETLDSDGDGECDFQE 73 (90)
T ss_dssp HHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHH---HHHCTTSSSSBCHHH
T ss_pred HHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHH---HHhcCCCCCcCCHHH
Confidence 389999999998775443333 2222222 233432 2221 123666788888887
No 8
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=3.67 E-value=2.1e+02 Score=19.02 Aligned_cols=34 Identities=6% Similarity=0.041 Sum_probs=19.7
Q ss_pred cchHHHHHHHHHhc---------ccccccCCCHHHHHH---HhhhcC
Q psy10534 211 NITTFFIDFFAKIG---------WAYDRKQPSATLVRN---TALRHG 245 (286)
Q Consensus 211 D~t~~~I~~l~~LG---------La~dlk~~~~~~i~~---~~~r~g 245 (286)
|+.-.+-+.+..|| ||+.|.. ++..|.+ +++|.|
T Consensus 7 ~i~~lvk~~l~~L~~~~~~tA~~LAk~Lg~-~Kk~VNr~LY~L~~~G 52 (70)
T d1sfua_ 7 EIFSLVKKEVLSLNTNDYTTAISLSNRLKI-NKKKINQQLYKLQKED 52 (70)
T ss_dssp HHHHHHHHHHHTSCTTCEECHHHHHHHTTC-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHhCC-CHHHHHHHHHHHHHCC
Confidence 44444555555555 7778876 5566665 345665
No 9
>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}
Probab=3.63 E-value=66 Score=21.99 Aligned_cols=53 Identities=23% Similarity=0.288 Sum_probs=30.7
Q ss_pred ccCCCCCCCCCCCcccc----hHHhhhhhhhhc--cChhH-HHhcccCCCccccCCceEEeeh
Q psy10534 52 HHKYSETDADPHNSKRG----FFFAHVGWLMCR--KHKDV-IEKGRMVDMSDVMADPLVRFHE 107 (286)
Q Consensus 52 HHk~sDtd~DPHs~~rG----f~~sH~GWll~~--~~p~~-~~~~~~~d~~DL~~Dp~v~fq~ 107 (286)
=|+||.+++|++.-.++ +.=.-++=.+.+ +.|+. .+..+ .=|...|--|-|++
T Consensus 16 FhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~---~LD~n~Dg~vdF~E 75 (83)
T d1xk4c1 16 FHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIME---DLDTNADKQLSFEE 75 (83)
T ss_dssp HHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHH---HHCTTCSSSBCHHH
T ss_pred HHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHH---HhcCCCCCcCcHHH
Confidence 38999999999998644 334444433332 33432 22211 22555777888877
No 10
>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=3.54 E-value=1.9e+02 Score=22.68 Aligned_cols=16 Identities=25% Similarity=0.567 Sum_probs=14.5
Q ss_pred HHHHHHHHhccccccc
Q psy10534 215 FFIDFFAKIGWAYDRK 230 (286)
Q Consensus 215 ~~I~~l~~LGLa~dlk 230 (286)
.+|+.|++||+.+..+
T Consensus 46 ~lID~LqRLGi~yhFe 61 (197)
T d5easa1 46 NLIDIIERLGISYHFE 61 (197)
T ss_dssp HHHHHHHHTTCGGGGH
T ss_pred HHHHHHHHcCcHHHHH
Confidence 5899999999999875
Done!