BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10539
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6US81|ACO11_SPOLI Acyl-CoA Delta(11) desaturase OS=Spodoptera littoralis PE=1 SV=1
Length = 338
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 60/74 (81%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
++ILPS+N+ VSI + GEG+HNYHHVFPWDYRAAE+G+ SLN T ++D FA IGWAYDL
Sbjct: 240 KKILPSQNIAVSIATFGEGFHNYHHVFPWDYRAAELGNNSLNFPTKFIDFFAWIGWAYDL 299
Query: 65 KKPSDKMIRSHAEK 78
K S +MI+ +++
Sbjct: 300 KTVSKEMIKQRSKR 313
>sp|O44390|ACO11_TRINI Acyl-CoA Delta(11) desaturase OS=Trichoplusia ni GN=D11DS PE=1 SV=2
Length = 349
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ ILP++N+ VS ++ GEG+HNYHHVFPWDYR AE+G+ LNLTT ++D A GWAYDL
Sbjct: 243 KSILPAQNLLVSFLASGEGFHNYHHVFPWDYRTAELGNNFLNLTTLFIDFCAWFGWAYDL 302
Query: 65 KKPSDKMIRSHAEK 78
K S+ +I+ A++
Sbjct: 303 KSVSEDIIKQRAKR 316
>sp|Q8ISS3|ACO11_CHORO Acyl-CoA Delta(11) desaturase OS=Choristoneura rosaceana PE=1 SV=1
Length = 335
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ ILP+EN I LGE +HNYHHVFPWDYRA+E+G+ +N T ++D FA IGWAYDL
Sbjct: 241 KNILPAENKMTFIACLGENFHNYHHVFPWDYRASELGNIGMNWTAKFIDFFAWIGWAYDL 300
Query: 65 KKPSDKMIRSHAEK 78
K SD+ I+S ++
Sbjct: 301 KTASDENIKSRMKR 314
>sp|O02858|ACOD_PIG Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1
Length = 334
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P EN+ VS+ ++GEG+HNYHH FP+DY A+E + +NLTTF++D A +G AYD
Sbjct: 267 KTISPRENILVSLGAVGEGFHNYHHTFPYDYSASEY-RWHINLTTFFIDCMAALGLAYDR 325
Query: 65 KKPSDKMI 72
KK S I
Sbjct: 326 KKVSKAAI 333
>sp|O62849|ACOD_SHEEP Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1
Length = 359
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A IG AYD
Sbjct: 278 KTINPRENILVSLGAVGEGFHNYHHTFPYDYSASEY-RWHINFTTFFIDCMAAIGLAYDR 336
Query: 65 KKPSD-----KMIRSHAEKY 79
KK S +M R+ E Y
Sbjct: 337 KKVSKAAVLGRMKRTGEESY 356
>sp|Q9TT94|ACOD_BOVIN Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2
Length = 359
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P EN+ VS+ + GEG+HNYHH FP+DY A+E + +N TTF++D A IG AYD
Sbjct: 278 KTINPRENILVSLGAAGEGFHNYHHTFPYDYSASEY-RWHINFTTFFIDCMAAIGLAYDR 336
Query: 65 KKPSDKMIRSHAEK 78
KK S I + ++
Sbjct: 337 KKVSKAAILARIKR 350
>sp|O00767|ACOD_HUMAN Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2
Length = 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A +G AYD
Sbjct: 278 KNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDR 336
Query: 65 KKPSDKMIRSHAEK 78
KK S I + ++
Sbjct: 337 KKVSKAAILARIKR 350
>sp|Q95MI7|ACOD_CAPHI Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1
Length = 359
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A IG AYD
Sbjct: 278 KTINPRENILVSLGAVGEGFHNYHHTFPYDYSASEY-RWHINFTTFFIDCMAAIGLAYDR 336
Query: 65 KKPS 68
KK S
Sbjct: 337 KKVS 340
>sp|Q64420|ACOD_MESAU Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1
Length = 354
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P EN VS+ LGEG+HNYHH FP+DY A+E + +N TTF++D A +G AYD
Sbjct: 273 KNIDPRENALVSLGCLGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDR 331
Query: 65 KKPSDKMIRSHAEK 78
KK S + + ++
Sbjct: 332 KKVSKAAVLARIKR 345
>sp|P13516|ACOD1_MOUSE Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=1 SV=2
Length = 355
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A +G AYD
Sbjct: 274 KNIQSRENILVSLGAVGEGFHNYHHTFPFDYSASEY-RWHINFTTFFIDCMAALGLAYDR 332
Query: 65 KKPSDKMIRSHAEKYAGHDH 84
KK S + + ++ H
Sbjct: 333 KKVSKATVLARIKRTGDGSH 352
>sp|P07308|ACOD1_RAT Acyl-CoA desaturase 1 OS=Rattus norvegicus GN=Scd1 PE=2 SV=2
Length = 358
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A +G AYD
Sbjct: 277 KNIQSRENILVSLGAVGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDR 335
Query: 65 KKPSDKMIRSHAEKYAGHDH 84
KK S + + ++ H
Sbjct: 336 KKVSKAAVLARIKRTGDGSH 355
>sp|Q6P7B9|ACOD2_RAT Acyl-CoA desaturase 2 OS=Rattus norvegicus GN=Scd2 PE=2 SV=1
Length = 358
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A +G AYD
Sbjct: 277 KNISSRENILVSMGAVGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMALLGLAYDR 335
Query: 65 KKPSDKMIRSHAEK 78
K+ S + + ++
Sbjct: 336 KRVSKAAVLARIKR 349
>sp|P13011|ACOD2_MOUSE Acyl-CoA desaturase 2 OS=Mus musculus GN=Scd2 PE=2 SV=2
Length = 358
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I EN+ VS+ ++GEG+HNYHH FP+DY A+E + +N TTF++D A +G AYD
Sbjct: 277 KNISSRENILVSMGAVGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMALLGLAYDR 335
Query: 65 KKPSDKMIRSHAEK 78
K+ S + + ++
Sbjct: 336 KRVSRAAVLARIKR 349
>sp|Q2KIA4|SCD5_BOVIN Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1
Length = 335
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P +N V++ ++GEG+HNYHH FP+DY A+E G + N TT+++D +G A D
Sbjct: 257 KHISPRQNPLVTLGAIGEGFHNYHHTFPFDYSASEFG-LNFNPTTWFIDFMCWLGLATDR 315
Query: 65 KKPSDKMIRSHAEK 78
K+ + +MI + +
Sbjct: 316 KRATKQMIEARKAR 329
>sp|Q86SK9|SCD5_HUMAN Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=2 SV=2
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 5 RRILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDL 64
+ I P +N V++ ++GEG+HNYHH FP+DY A+E G + N TT+++D +G A D
Sbjct: 252 KHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFG-LNFNPTTWFIDFMCWLGLATDR 310
Query: 65 KKPSDKMIRSHAEK 78
K+ + MI + +
Sbjct: 311 KRATKPMIEARKAR 324
>sp|Q92038|ACOD_CYPCA Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 7 ILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTT-FWLDQFAKIGWAYDLK 65
I P EN +V+ ++GEG+HNYHH FP+DY +E G LNLTT ++D +G A + K
Sbjct: 247 INPRENRFVTFSAIGEGFHNYHHTFPFDYATSEFGC-KLNLTTCCFIDLMCFLGLAREPK 305
Query: 66 KPSDKMIRSHAEKYAGHDH 84
+ S + + + A++ H
Sbjct: 306 RVSREAVLARAQRTGDGSH 324
>sp|P21147|ACO1_YEAST Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OLE1 PE=1 SV=2
Length = 510
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 6 RILPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLK 65
R P +N +IV+ GEG+HN+HH FP DYR A + Y + T + + +G AYDLK
Sbjct: 316 RRTPRDNWITAIVTFGEGYHNFHHEFPTDYRNA-IKWYQYDPTKVIIYLTSLVGLAYDLK 374
Query: 66 KPSDKMI 72
K S I
Sbjct: 375 KFSQNAI 381
>sp|Q12618|ACO1_AJECA Acyl-CoA desaturase OS=Ajellomyces capsulatus GN=OLE1 PE=3 SV=1
Length = 476
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 9 PSENVWVSIVSLGEGWHNYHHVFPWDYR-AAEMGSYSLNLTTFWLDQFAKIGWAYDLKK 66
P +++ ++V+LGEG+HN+HH FP DYR A E Y T W+ + ++G AYDLK+
Sbjct: 259 PRDHIVTALVTLGEGYHNFHHEFPSDYRNAIEWHQYDPTKWTIWI--WKQLGLAYDLKQ 315
>sp|Q949X0|ADS3_ARATH Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase,
chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=2 SV=2
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 LPSENVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKP 67
L N WV+ ++ GEGWHN HH F + R + + L++T + + IG A D+K P
Sbjct: 300 LSKNNWWVAALAFGEGWHNNHHAFEFSARHG-LEWWQLDMTWYVVKFLQAIGLATDVKLP 358
Query: 68 SD 69
S+
Sbjct: 359 SE 360
>sp|Q9LVZ3|ADS32_ARATH Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis
thaliana GN=ADS3.2 PE=2 SV=3
Length = 361
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 12 NVWVSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPSDKM 71
N WV+I++LGEGWHN HH F + R + + L++T + IG A ++K P++
Sbjct: 296 NWWVAILTLGEGWHNNHHAFEFSARHG-LEWWQLDITWCLIRFLEAIGLATNVKLPTETQ 354
Query: 72 IRSHA 76
++ A
Sbjct: 355 MKGKA 359
>sp|Q9LND8|ADSL2_ARATH Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana
GN=At1g06100 PE=2 SV=1
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S NVW ++++++GE WHN HH F R + Y L++T + + F +G A ++K P+
Sbjct: 230 SRNVWWLALLTMGESWHNNHHAFETSARHG-LEWYQLDITWYLIWFFQALGLATNVKLPT 288
Query: 69 DKMIRSHAEK 78
D R A +
Sbjct: 289 DAQKRKMAIR 298
>sp|O94523|ACO1_SCHPO Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC1281.06c PE=3 SV=1
Length = 479
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 15 VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPSDKMIR 73
++V+LGEG HNYHH FP DYR + Y + T ++ + G AY+L D I+
Sbjct: 274 TALVTLGEGNHNYHHAFPNDYRNG-LRWYEYDPTKIFIYIASLFGLAYNLNTFPDNEIQ 331
>sp|Q9LND9|ADSL1_ARATH Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana
GN=At1g06090 PE=2 SV=1
Length = 299
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S N+W + ++GE WHN HH F R + Y ++LT + + F +G A D+K P+
Sbjct: 230 SRNIWWLGPFTMGESWHNNHHAFEASARHG-LEWYQVDLTWYLICFFQALGLATDVKLPT 288
Query: 69 DKMIRSHA 76
D R A
Sbjct: 289 DAQKRKLA 296
>sp|Q9SID2|ADS2_ARATH Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2
PE=2 SV=2
Length = 307
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S NVW +S+ S GE WHN HH F R + + ++++ + + F IG A D+K P+
Sbjct: 238 SRNVWWLSVFSFGESWHNNHHAFESSARQG-LEWWQIDISWYIVRFFEIIGLATDVKVPT 296
Query: 69 DKMIRSHA 76
+ R A
Sbjct: 297 EAQRRRMA 304
>sp|Q9LMI4|ADSL4_ARATH Delta-9 desaturase-like 4 protein OS=Arabidopsis thaliana
GN=At1g06350 PE=2 SV=2
Length = 300
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S NVW +S+ ++GE WHN HH F R + + +++T + + F +G A D+K PS
Sbjct: 231 SRNVWWLSLFTMGESWHNNHHAFESSARQG-LEWWQIDITWYLIRLFEVLGIATDVKLPS 289
Query: 69 D 69
+
Sbjct: 290 E 290
>sp|Q9LMI3|ADSL5_ARATH Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana
GN=At1g06360 PE=2 SV=1
Length = 299
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S NVW +S+ ++GE WHN HH F R + + +++T + + F +G A D+K PS
Sbjct: 230 SRNVWWLSLFTMGESWHNNHHAFESSARQG-LEWWQIDITWYLIRLFEVLGLATDVKLPS 288
Query: 69 D 69
+
Sbjct: 289 E 289
>sp|O65797|ADS1_ARATH Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1
PE=2 SV=1
Length = 305
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S NVW +S+ S GE WHN HH F R + + ++++ + + IG A D+K PS
Sbjct: 236 SRNVWWLSVFSFGESWHNNHHAFESSARQG-LEWWQIDISWYIVRFLEIIGLATDVKLPS 294
Query: 69 DKMIRSHA 76
+ R A
Sbjct: 295 ESQRRRMA 302
>sp|Q9FPD5|ADSL3_ARATH Delta-9 desaturase-like 3 protein OS=Arabidopsis thaliana
GN=At1g06120 PE=2 SV=1
Length = 299
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 10 SENVW-VSIVSLGEGWHNYHHVFPWDYRAAEMGSYSLNLTTFWLDQFAKIGWAYDLKKPS 68
S N+W + ++GE WHN HH F R + Y ++LT + + F +G A D+K P+
Sbjct: 230 SRNIWWLGPFTMGESWHNNHHAFEASARHG-LEWYQVDLTWYLIWFFQVLGLATDVKLPT 288
Query: 69 DKMIR 73
D R
Sbjct: 289 DAQKR 293
>sp|Q63449|PRGR_RAT Progesterone receptor OS=Rattus norvegicus GN=Pgr PE=2 SV=1
Length = 923
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 12/57 (21%)
Query: 14 WVSIVSLGEGWHNYHHV------FPWDY-----RAAEMGSYSLNLTTFWLDQ-FAKI 58
W+S++ G GW +Y HV F D R E+ YSL LT + + Q F K+
Sbjct: 745 WMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKELSFYSLCLTMWQIPQEFVKL 801
>sp|Q00175|PRGR_MOUSE Progesterone receptor OS=Mus musculus GN=Pgr PE=1 SV=1
Length = 923
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 12/57 (21%)
Query: 14 WVSIVSLGEGWHNYHHV------FPWDY-----RAAEMGSYSLNLTTFWLDQ-FAKI 58
W+S++ G GW +Y HV F D R E+ YSL LT + + Q F K+
Sbjct: 745 WMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKELSFYSLCLTMWQIPQEFVKL 801
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,929,013
Number of Sequences: 539616
Number of extensions: 1643466
Number of successful extensions: 4364
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4317
Number of HSP's gapped (non-prelim): 35
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)