RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10541
         (152 letters)



>d1r8na_ b.42.4.1 (A:) Serine protease inhibitor DrTI {Royal
           poinciana (Delonix regia) [TaxId: 72433]}
          Length = 185

 Score = 27.2 bits (60), Expect = 0.67
 Identities = 9/24 (37%), Positives = 10/24 (41%)

Query: 46  VIEKGRQLDLSDLFEDPLVVVFQK 69
             E  R L L    + P  VVF K
Sbjct: 153 NYEGRRSLVLKSSDDVPFRVVFVK 176


>d1vi4a_ c.8.7.1 (A:) Hypothetical protein VC2366 {Vibrio cholerae
           [TaxId: 666]}
          Length = 162

 Score = 26.5 bits (58), Expect = 1.3
 Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 9/53 (16%)

Query: 54  DLSDLFEDPLVVV---FQKYYIYIRFVMCFFLPAYINTVWLGEDWWISFITMD 103
           DL D +E  + ++    Q +     F         I TV    D       + 
Sbjct: 7   DLCDKYESQVTLLNLPLQNFGQRSAFW------GEIVTVRCYHDNSKVRDVLS 53


>g1r8o.1 b.42.4.1 (A:,B:) Two-chain trypsin inhibitor {Balsam
           copaiba (Copaifera langsdorffii) [TaxId: 280048]}
          Length = 167

 Score = 25.2 bits (55), Expect = 3.3
 Identities = 6/23 (26%), Positives = 14/23 (60%), Gaps = 2/23 (8%)

Query: 48  EKGRQLDLSDLFEDPLVVVFQKY 70
           +K ++L + D   +P ++ F+K 
Sbjct: 146 KKEKRLVVKD--GNPFIIRFKKS 166


>d1eyla_ b.42.4.1 (A:) chymotrypsin inhibitor WCI {Winged bean
           (Psophocarpus tetragonolobus) [TaxId: 3891]}
          Length = 179

 Score = 24.9 bits (54), Expect = 3.8
 Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 2/22 (9%)

Query: 48  EKGRQLDLSDLFEDPLVVVFQK 69
              R+L +++  E+PL +V  K
Sbjct: 157 NGNRRLVVTE--ENPLELVLLK 176


>d1wbaa_ b.42.4.1 (A:) Winged bean albumin 1 {Goa bean (Psophocarpus
           tetragonolobus) [TaxId: 3891]}
          Length = 171

 Score = 24.9 bits (54), Expect = 4.1
 Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 1/21 (4%)

Query: 50  GRQLDLSDLFEDPLVVVFQKY 70
            ++L +S    DPLVV F ++
Sbjct: 152 KKRLVVSYQ-SDPLVVKFHRH 171


>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal
           domain {Escherichia coli [TaxId: 562]}
          Length = 114

 Score = 23.8 bits (51), Expect = 7.2
 Identities = 9/55 (16%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 69  KYYIYIRFVMCFFLPAYINTVWLGEDWWISFITMDFIRYVANLNFTFLVNSAAHM 123
           K Y+ I  ++          +  G  +       +F   V    F F+   A  +
Sbjct: 58  KSYLNIPAIISAAEITGAVAIHPG--YGFLSENANFAEQVERSGFIFIGPKAETI 110


>d1tiea_ b.42.4.1 (A:) Erythrina cafra trypsin inhibitor {Erythrina
           caffra [TaxId: 3842]}
          Length = 170

 Score = 23.7 bits (51), Expect = 8.9
 Identities = 7/22 (31%), Positives = 14/22 (63%), Gaps = 2/22 (9%)

Query: 48  EKGRQLDLSDLFEDPLVVVFQK 69
           +  R+L +++  + PL VV +K
Sbjct: 149 KGYRRLVVTE--DYPLTVVLKK 168


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.329    0.140    0.475 

Gapped
Lambda     K      H
   0.267   0.0604    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 643,868
Number of extensions: 29013
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 117
Number of HSP's successfully gapped: 19
Length of query: 152
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 74
Effective length of database: 1,336,656
Effective search space: 98912544
Effective search space used: 98912544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 49 (22.9 bits)