Query psy10544
Match_columns 181
No_of_seqs 119 out of 1479
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 21:08:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htm_A Speckle-type POZ protei 100.0 6.1E-31 2.1E-35 194.7 14.0 155 3-157 7-164 (172)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 4.7E-31 1.6E-35 207.3 12.9 151 4-154 5-160 (256)
3 3i3n_A Kelch-like protein 11; 100.0 1.7E-30 5.7E-35 206.5 12.5 154 3-156 5-170 (279)
4 2z8h_A Transcription regulator 100.0 2.1E-30 7.1E-35 186.1 11.6 127 3-129 9-137 (138)
5 3b84_A Zinc finger and BTB dom 100.0 2.3E-30 7.8E-35 181.4 10.0 115 7-123 1-115 (119)
6 2if5_A Zinc finger and BTB dom 100.0 1.3E-29 4.4E-34 177.6 12.9 116 7-122 2-119 (120)
7 1r29_A B-cell lymphoma 6 prote 100.0 1.6E-29 5.6E-34 178.8 13.1 120 3-122 2-123 (127)
8 2ihc_A Transcription regulator 100.0 1.2E-30 4.1E-35 184.1 7.1 121 2-122 1-122 (124)
9 4eoz_A Speckle-type POZ protei 100.0 1.8E-30 6E-35 187.2 8.1 134 13-146 8-144 (145)
10 3ohu_A Transcription regulator 100.0 2.3E-30 7.7E-35 182.7 8.3 120 2-121 4-124 (125)
11 1buo_A POZ domain, protein (pr 100.0 2.5E-29 8.4E-34 176.6 12.5 116 4-122 2-117 (121)
12 2ppi_A Gigaxonin; BTB domain, 100.0 2.1E-29 7.1E-34 182.2 11.8 120 3-122 20-143 (144)
13 3ga1_A Nucleus accumbens-assoc 100.0 7.5E-30 2.6E-34 181.1 8.3 120 2-123 5-125 (129)
14 2q81_A MIZ-1 protein; BTB/POZ 100.0 2.3E-29 7.9E-34 176.3 7.9 115 5-122 2-116 (119)
15 2yy9_A Zinc finger and BTB dom 100.0 7.7E-29 2.6E-33 177.3 10.6 112 9-122 4-115 (135)
16 3hqi_A Speckle-type POZ protei 100.0 2.4E-28 8.3E-33 196.7 14.3 145 13-157 157-304 (312)
17 2vpk_A Myoneurin; transcriptio 100.0 1.3E-28 4.6E-33 171.5 11.1 110 11-122 3-114 (116)
18 3fkc_A Transcriptional regulat 100.0 4.3E-28 1.5E-32 169.2 12.4 112 2-116 3-115 (116)
19 3m5b_A Zinc finger and BTB dom 99.9 1.5E-26 5.2E-31 162.0 9.9 113 1-122 3-115 (119)
20 2vkp_A BTB/POZ domain-containi 99.9 8E-26 2.7E-30 155.5 9.7 99 24-122 2-105 (109)
21 2ast_A S-phase kinase-associat 99.6 6.5E-15 2.2E-19 107.7 9.3 112 33-145 3-149 (159)
22 4ajy_C Transcription elongatio 99.4 3.1E-12 1E-16 85.9 9.0 77 33-110 4-96 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.3 2.9E-12 1E-16 91.7 8.2 101 33-136 4-135 (141)
24 2p1m_A SKP1-like protein 1A; F 99.2 2.2E-12 7.5E-17 94.2 2.2 108 33-142 6-145 (160)
25 1hv2_A Elongin C, ELC1; protei 98.8 2.5E-08 8.6E-13 66.8 8.1 79 32-111 5-99 (99)
26 3v7d_A Suppressor of kinetocho 98.8 6.4E-08 2.2E-12 71.0 10.5 109 32-141 8-152 (169)
27 2fnj_C Transcription elongatio 98.8 1.5E-08 5.3E-13 67.5 6.3 78 33-111 3-96 (96)
28 3drz_A BTB/POZ domain-containi 98.7 5E-08 1.7E-12 66.3 8.5 89 32-121 7-103 (107)
29 1vcb_B Protein (elongin C); tu 98.3 1.4E-06 4.7E-11 59.6 6.7 79 32-111 18-112 (112)
30 3drx_A BTB/POZ domain-containi 98.0 8.3E-06 2.8E-10 61.1 5.6 88 33-121 14-109 (202)
31 3kvt_A Potassium channel prote 97.3 0.00018 6.1E-09 49.2 4.0 83 32-115 6-93 (115)
32 1s1g_A Potassium voltage-gated 97.3 0.0002 7E-09 49.6 4.1 84 32-119 14-105 (124)
33 1t1d_A Protein (potassium chan 97.1 0.00049 1.7E-08 45.8 4.0 86 33-119 3-95 (100)
34 2nz0_B Potassium voltage-gated 97.1 0.00068 2.3E-08 47.9 4.6 79 32-114 36-121 (140)
35 1nn7_A Potassium channel KV4.2 96.7 0.00047 1.6E-08 46.3 1.3 83 33-119 2-92 (105)
36 2eqx_A Kelch repeat and BTB do 92.9 0.1 3.4E-06 34.5 3.6 31 92-122 6-36 (105)
37 2r9r_B Paddle chimera voltage 92.7 0.11 3.8E-06 44.1 4.5 83 32-115 53-141 (514)
38 2yy9_A Zinc finger and BTB dom 86.0 0.97 3.3E-05 30.8 4.3 36 122-157 84-119 (135)
39 2eqx_A Kelch repeat and BTB do 82.8 1.5 5.2E-05 28.6 4.0 34 123-156 6-39 (105)
40 2q81_A MIZ-1 protein; BTB/POZ 79.8 3.4 0.00012 27.2 5.0 34 122-155 85-118 (119)
41 2vkp_A BTB/POZ domain-containi 79.5 3.5 0.00012 26.5 4.9 32 123-154 75-106 (109)
42 3b84_A Zinc finger and BTB dom 78.7 2.8 9.5E-05 27.7 4.2 35 122-156 83-117 (119)
43 1r29_A B-cell lymphoma 6 prote 78.0 4 0.00014 27.1 4.9 34 123-156 93-126 (127)
44 2if5_A Zinc finger and BTB dom 77.9 4.8 0.00017 26.3 5.3 31 123-153 89-119 (120)
45 2vpk_A Myoneurin; transcriptio 77.3 4.5 0.00015 26.4 5.0 33 122-154 83-115 (116)
46 1buo_A POZ domain, protein (pr 73.5 6.6 0.00022 25.8 5.0 33 122-154 86-118 (121)
47 3m5b_A Zinc finger and BTB dom 71.9 4.5 0.00016 26.8 3.9 34 122-155 84-117 (119)
48 2z8h_A Transcription regulator 70.7 7.1 0.00024 26.3 4.8 36 122-157 98-133 (138)
49 3htm_A Speckle-type POZ protei 66.7 5.2 0.00018 27.8 3.5 30 93-122 131-160 (172)
50 2ppi_A Gigaxonin; BTB domain, 65.4 6.1 0.00021 27.0 3.6 30 124-153 114-143 (144)
51 3hqi_A Speckle-type POZ protei 58.0 8.3 0.00029 29.8 3.5 31 93-123 271-301 (312)
52 4eoz_A Speckle-type POZ protei 53.0 15 0.00052 24.5 3.8 33 124-156 90-122 (145)
53 2ast_A S-phase kinase-associat 45.3 40 0.0014 23.4 5.1 30 124-153 93-122 (159)
54 3ga1_A Nucleus accumbens-assoc 42.9 7.2 0.00025 25.9 0.8 33 122-154 93-125 (129)
55 3hve_A Gigaxonin; ubiquitin, c 41.6 40 0.0014 25.0 4.9 36 122-157 96-131 (256)
56 3i3n_A Kelch-like protein 11; 39.5 25 0.00085 26.6 3.5 29 93-121 138-166 (279)
57 1fs1_B SKP1, cyclin A/CDK2-ass 36.0 72 0.0025 21.6 5.1 59 94-153 44-117 (141)
58 1k8k_G P16, ARP2/3 complex 16 21.4 44 0.0015 23.4 1.8 18 73-90 96-113 (151)
59 2gsl_A Hypothetical protein; a 20.8 1.2E+02 0.0042 20.6 4.0 29 76-107 98-126 (137)
No 1
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=6.1e-31 Score=194.69 Aligned_cols=155 Identities=19% Similarity=0.264 Sum_probs=138.8
Q ss_pred CcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCC--CCCCeEEeCCCCHHHH
Q psy10544 3 SQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHP--DRHPIVILKDIPYVDM 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~--~~~~~i~l~~i~~~~f 80 (181)
++.-...++.++.++.++++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++. .....|.++++++++|
T Consensus 7 ~~~~~~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f 86 (172)
T 3htm_A 7 GQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVF 86 (172)
T ss_dssp -----CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHH
T ss_pred CccccccCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHH
Confidence 34444556667788999999999999999999999999999999999999999999999874 3457999999999999
Q ss_pred HHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh-cCChhhHHHHHHHHHHcChHHHHHHhHHhhccCC
Q psy10544 81 RSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGEV-SVDQDRLTTFLKVAESLRIKELVSNVKAERDTEG 157 (181)
Q Consensus 81 ~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~-~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~~ 157 (181)
+.+|+|+|+|.+.++.+++.+++.+|++|+++.+++.|++++. .++.+||..++.+|+.|++..|.+.+...+..+-
T Consensus 87 ~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~ 164 (172)
T 3htm_A 87 KEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997654 7899999999999999999999999998887654
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=4.7e-31 Score=207.26 Aligned_cols=151 Identities=19% Similarity=0.315 Sum_probs=129.8
Q ss_pred cceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCC----CCCCeEEeCCCCHHH
Q psy10544 4 QRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHP----DRHPIVILKDIPYVD 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~----~~~~~i~l~~i~~~~ 79 (181)
+...+.+++|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++. +....|.++++++++
T Consensus 5 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~ 84 (256)
T 3hve_A 5 EGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMV 84 (256)
T ss_dssp -----CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHH
T ss_pred CCCccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHH
Confidence 4578899999999999999999999999999999999999999999999999999998764 345789999999999
Q ss_pred HHHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh-hcCChhhHHHHHHHHHHcChHHHHHHhHHhhc
Q psy10544 80 MRSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE-VSVDQDRLTTFLKVAESLRIKELVSNVKAERD 154 (181)
Q Consensus 80 f~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~-~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~ 154 (181)
|+.+|+|+|||++.++.+++.+++.+|++|+++.+++.|.++. ..++.+||+.++.+|+.|++..|.+.+...+.
T Consensus 85 f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 160 (256)
T 3hve_A 85 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLE 160 (256)
T ss_dssp HHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999764 48899999999999999999999888877654
No 3
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.97 E-value=1.7e-30 Score=206.51 Aligned_cols=154 Identities=19% Similarity=0.274 Sum_probs=138.3
Q ss_pred CcceeeecCccHHHHHHHHHHHHhCCCcccEEEEEC---CeEEEhhHHHhhccCHHHHHhhcCCC--CCCCeEEeC----
Q psy10544 3 SQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVD---GRYLKAHKIVLSACSPYFQALFVGHP--DRHPIVILK---- 73 (181)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~---~~~~~~Hk~vLa~~S~~F~~~f~~~~--~~~~~i~l~---- 73 (181)
+....|.+++|+..+++.++++++++.+|||+|.++ |+.|+|||.||+++|+||++||.+++ +....|.++
T Consensus 5 ~~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~ 84 (279)
T 3i3n_A 5 MEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSS 84 (279)
T ss_dssp CCEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSS
T ss_pred ccccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccc
Confidence 457889999999999999999999999999999998 89999999999999999999999874 445789998
Q ss_pred --CCCHHHHHHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh-cCChhhHHHHHHHHHHcChHHHHHHhH
Q psy10544 74 --DIPYVDMRSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGEV-SVDQDRLTTFLKVAESLRIKELVSNVK 150 (181)
Q Consensus 74 --~i~~~~f~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~-~~~~~~~~~~l~~a~~~~~~~L~~~~~ 150 (181)
++++++|+.+|+|+|||.+.++.+++.+++.+|++|+++.+++.|.+++. .++.+||+.++.+|+.|++..|.+.+.
T Consensus 85 ~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~ 164 (279)
T 3i3n_A 85 EPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAA 164 (279)
T ss_dssp TTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHH
Confidence 89999999999999999999999999999999999999999999997644 789999999999999999999988888
Q ss_pred HhhccC
Q psy10544 151 AERDTE 156 (181)
Q Consensus 151 ~~~~~~ 156 (181)
..+..+
T Consensus 165 ~~i~~~ 170 (279)
T 3i3n_A 165 DMIRRN 170 (279)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777544
No 4
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.97 E-value=2.1e-30 Score=186.06 Aligned_cols=127 Identities=24% Similarity=0.431 Sum_probs=118.1
Q ss_pred CcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeC-CCCHHHHH
Q psy10544 3 SQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILK-DIPYVDMR 81 (181)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~-~i~~~~f~ 81 (181)
++.+++.|+.|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.+++.+...|.++ ++++++|+
T Consensus 9 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~~~~~~ 88 (138)
T 2z8h_A 9 SAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTVKGFE 88 (138)
T ss_dssp TCCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTTEEEECCTTSCHHHHH
T ss_pred CCeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCCceEEeCCCCCHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999988777789995 89999999
Q ss_pred HHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh-cCChhh
Q psy10544 82 SLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGEV-SVDQDR 129 (181)
Q Consensus 82 ~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~-~~~~~~ 129 (181)
.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|++++. .++..|
T Consensus 89 ~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 89 PLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999997754 555443
No 5
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=181.41 Aligned_cols=115 Identities=26% Similarity=0.364 Sum_probs=108.6
Q ss_pred eeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhh
Q psy10544 7 CLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMRSLLDF 86 (181)
Q Consensus 7 ~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~~lL~y 86 (181)
+++|++|+..+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|
T Consensus 1 s~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~--~~~i~l~~~~~~~f~~ll~~ 78 (119)
T 3b84_A 1 SMSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS--GGSVVLPAGFAEIFGLLLDF 78 (119)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT--CCCEEECGGGHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC--CCeEEeCCCCHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999876 56799999999999999999
Q ss_pred HcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh
Q psy10544 87 MYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGEV 123 (181)
Q Consensus 87 lYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~ 123 (181)
+|||++.++.+++.+++.+|++|+++.+++.|++++.
T Consensus 79 iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 79 FYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred HcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998754
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.96 E-value=1.3e-29 Score=177.57 Aligned_cols=116 Identities=27% Similarity=0.454 Sum_probs=108.6
Q ss_pred eeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCC--CCCCeEEeCCCCHHHHHHHh
Q psy10544 7 CLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHP--DRHPIVILKDIPYVDMRSLL 84 (181)
Q Consensus 7 ~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~--~~~~~i~l~~i~~~~f~~lL 84 (181)
.++|++|++.+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.+++ +....|.++++++++|+.+|
T Consensus 2 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll 81 (120)
T 2if5_A 2 GIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALM 81 (120)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHH
T ss_pred CcCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999874 45678999999999999999
Q ss_pred hhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 85 DFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 85 ~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+|+|||++.++.+++.+++.+|++|+++.+++.|++++
T Consensus 82 ~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 82 DFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999764
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.96 E-value=1.6e-29 Score=178.77 Aligned_cols=120 Identities=23% Similarity=0.389 Sum_probs=112.0
Q ss_pred CcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCC-CCCeEEe-CCCCHHHH
Q psy10544 3 SQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPD-RHPIVIL-KDIPYVDM 80 (181)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~-~~~~i~l-~~i~~~~f 80 (181)
+....+.|++|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.+++. ....|.+ +++++++|
T Consensus 2 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f 81 (127)
T 1r29_A 2 SADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGF 81 (127)
T ss_dssp ---CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHH
T ss_pred CCCccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHH
Confidence 567789999999999999999999999999999999999999999999999999999998754 5679999 89999999
Q ss_pred HHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 81 RSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 81 ~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+.+|+|+|||.+.++.+++.+++.+|++|+++.|++.|++++
T Consensus 82 ~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l 123 (127)
T 1r29_A 82 NILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFI 123 (127)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999764
No 8
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=184.10 Aligned_cols=121 Identities=23% Similarity=0.447 Sum_probs=111.7
Q ss_pred CCcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeC-CCCHHHH
Q psy10544 2 TSQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILK-DIPYVDM 80 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~-~i~~~~f 80 (181)
+++.+.+.|+.|+..+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+...|.++ ++++++|
T Consensus 1 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~i~l~~~v~~~~f 80 (124)
T 2ihc_A 1 SMSVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTVKGF 80 (124)
T ss_dssp --CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---CEEEECCTTSCHHHH
T ss_pred CCceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCCceEeecCCcCHHHH
Confidence 356889999999999999999999999999999999999999999999999999999999987777789994 8999999
Q ss_pred HHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 81 RSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 81 ~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+.+|+|+|||++.++.+++.+++.+|++|+++.+++.|++++
T Consensus 81 ~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 81 EPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp HHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred HHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999764
No 9
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.8e-30 Score=187.21 Aligned_cols=134 Identities=21% Similarity=0.340 Sum_probs=102.1
Q ss_pred cHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCC--CCCeEEeCCCCHHHHHHHhhhHcCC
Q psy10544 13 HQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPD--RHPIVILKDIPYVDMRSLLDFMYRG 90 (181)
Q Consensus 13 ~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~--~~~~i~l~~i~~~~f~~lL~ylYtg 90 (181)
.++++.++++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++.. ....|.++++++++|+.+|+|+|+|
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccC
Confidence 45678899999999999999999999999999999999999999999998753 3479999999999999999999999
Q ss_pred cccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh-hcCChhhHHHHHHHHHHcChHHHH
Q psy10544 91 EVSVDQDRLTTFLKVAESLRIKALSALLYRGE-VSVDQDRLTTFLKVAESLRIKELV 146 (181)
Q Consensus 91 ~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~-~~~~~~~~~~~l~~a~~~~~~~L~ 146 (181)
.+.++.+++.+++.+|++|+++.+++.|++++ ..++.+||..++.+|++|++.+|.
T Consensus 88 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 88 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 144 (145)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------------------
T ss_pred ccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhc
Confidence 99999999999999999999999999999764 478999999999999999999885
No 10
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.96 E-value=2.3e-30 Score=182.75 Aligned_cols=120 Identities=26% Similarity=0.448 Sum_probs=114.9
Q ss_pred CCcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCC-CCHHHH
Q psy10544 2 TSQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKD-IPYVDM 80 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~-i~~~~f 80 (181)
++..+.+.+++|+.++++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.+++.+...|.+++ +++++|
T Consensus 4 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~~~~~~f 83 (125)
T 3ohu_A 4 GSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTARGF 83 (125)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCSSCEEECCTTCCHHHH
T ss_pred CCcceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCCCcEEEeCCCCCHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999999887788999998 999999
Q ss_pred HHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHh
Q psy10544 81 RSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRG 121 (181)
Q Consensus 81 ~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~ 121 (181)
+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++
T Consensus 84 ~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 84 GPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp HHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred HHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999764
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.96 E-value=2.5e-29 Score=176.56 Aligned_cols=116 Identities=23% Similarity=0.330 Sum_probs=110.4
Q ss_pred cceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHH
Q psy10544 4 QRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMRSL 83 (181)
Q Consensus 4 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~~l 83 (181)
+.+.+++++|++.+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+
T Consensus 2 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---~~~i~l~~~~~~~f~~l 78 (121)
T 1buo_A 2 GMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN---SQHYTLDFLSPKTFQQI 78 (121)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHHHHHHH
T ss_pred CceeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC---CcEEEeCCCCHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999874 55899999999999999
Q ss_pred hhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 84 LDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 84 L~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
|+|+|||++.++.+++.+++.+|++|+++.+++.|++++
T Consensus 79 l~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l 117 (121)
T 1buo_A 79 LEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKML 117 (121)
T ss_dssp HHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999764
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=182.18 Aligned_cols=120 Identities=23% Similarity=0.425 Sum_probs=111.0
Q ss_pred CcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCC----CCCCeEEeCCCCHH
Q psy10544 3 SQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHP----DRHPIVILKDIPYV 78 (181)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~----~~~~~i~l~~i~~~ 78 (181)
.+.+.+.+++|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.+++ +....|.+++++++
T Consensus 20 ~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~ 99 (144)
T 2ppi_A 20 FQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVM 99 (144)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHH
T ss_pred eeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHH
Confidence 46788999999999999999999999999999999999999999999999999999998764 35679999999999
Q ss_pred HHHHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 79 DMRSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 79 ~f~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+|+.+|+|+|||.+.++.+++.+|+.+|++|+++.|++.|++++
T Consensus 100 ~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 100 VMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999764
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.96 E-value=7.5e-30 Score=181.11 Aligned_cols=120 Identities=24% Similarity=0.385 Sum_probs=108.6
Q ss_pred CCcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeC-CCCHHHH
Q psy10544 2 TSQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILK-DIPYVDM 80 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~-~i~~~~f 80 (181)
.++++.++|++|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ....|.++ ++++++|
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~--~~~~i~l~~~~~~~~f 82 (129)
T 3ga1_A 5 SAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS--RSAVVELPAAVQPQSF 82 (129)
T ss_dssp --CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC--CCSEEECCTTCCHHHH
T ss_pred CCceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC--CCCEEEECCCCCHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999987 66789996 9999999
Q ss_pred HHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh
Q psy10544 81 RSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGEV 123 (181)
Q Consensus 81 ~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~ 123 (181)
+.+|+|+|||++.++.+++.+++.+|++|+++.+++.|++++.
T Consensus 83 ~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 83 QQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp HHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred HHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998754
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.96 E-value=2.3e-29 Score=176.27 Aligned_cols=115 Identities=29% Similarity=0.446 Sum_probs=106.7
Q ss_pred ceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHh
Q psy10544 5 RFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMRSLL 84 (181)
Q Consensus 5 ~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~~lL 84 (181)
...+++++|++.+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|
T Consensus 2 p~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~i~l~~~~~~~f~~ll 78 (119)
T 2q81_A 2 PLGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ---KDVVHLDISNAAGLGQVL 78 (119)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC---CSGGGGGGCCHHHHHHHH
T ss_pred CcccccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC---CCEEEeCCCCHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999873 456888999999999999
Q ss_pred hhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 85 DFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 85 ~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+|+|||++.++.+++.+++.+|++|+++.+++.|++++
T Consensus 79 ~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l 116 (119)
T 2q81_A 79 EFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALK 116 (119)
T ss_dssp HHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875
No 15
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.96 E-value=7.7e-29 Score=177.31 Aligned_cols=112 Identities=26% Similarity=0.350 Sum_probs=102.2
Q ss_pred ecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhHc
Q psy10544 9 RWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMRSLLDFMY 88 (181)
Q Consensus 9 ~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~~lL~ylY 88 (181)
.+++|...+++.++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~--~~~i~l~~~~~~~f~~lL~fiY 81 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT--GGSVVLPAGFAEIFGLLLDFFY 81 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC------CCEEECGGGHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC--CCeEEeCCCCHHHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999999999999999876 5579999999999999999999
Q ss_pred CCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 89 RGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 89 tg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
||++.++.+++.+|+.+|++|+++.|++.|++++
T Consensus 82 tg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l 115 (135)
T 2yy9_A 82 TGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQ 115 (135)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999874
No 16
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.96 E-value=2.4e-28 Score=196.74 Aligned_cols=145 Identities=19% Similarity=0.301 Sum_probs=132.9
Q ss_pred cHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCC--CCCCeEEeCCCCHHHHHHHhhhHcCC
Q psy10544 13 HQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHP--DRHPIVILKDIPYVDMRSLLDFMYRG 90 (181)
Q Consensus 13 ~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~--~~~~~i~l~~i~~~~f~~lL~ylYtg 90 (181)
.+..+.++++++++++.+|||+|.++|++|+|||.||+++|+||++||.+++ .....|.++++++++|+.+|+|+|||
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCC
Confidence 3457899999999999999999999999999999999999999999999863 45679999999999999999999999
Q ss_pred cccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh-cCChhhHHHHHHHHHHcChHHHHHHhHHhhccCC
Q psy10544 91 EVSVDQDRLTTFLKVAESLRIKALSALLYRGEV-SVDQDRLTTFLKVAESLRIKELVSNVKAERDTEG 157 (181)
Q Consensus 91 ~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~-~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~~ 157 (181)
.+.+..+++.+|+.+|++|+++.|++.|++++. .++.+|+..++.+|++|++..|.+.|...+..+-
T Consensus 237 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 304 (312)
T 3hqi_A 237 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHA 304 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997654 7899999999999999999999999999887654
No 17
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=171.48 Aligned_cols=110 Identities=22% Similarity=0.366 Sum_probs=104.2
Q ss_pred CccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeC--CCCHHHHHHHhhhHc
Q psy10544 11 NNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILK--DIPYVDMRSLLDFMY 88 (181)
Q Consensus 11 ~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~--~i~~~~f~~lL~ylY 88 (181)
++|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ....|.++ ++++++|+.+|+|+|
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--~~~~i~l~~~~~~~~~f~~ll~~~Y 80 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST--SENNVFLDQSQVKADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC--CCSCEECCTTTCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC--CCCeEEeecCCCCHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999999999999999999987 35578888 999999999999999
Q ss_pred CCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 89 RGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 89 tg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
||++.++.+++.+++.+|++|+++.|++.|++++
T Consensus 81 t~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l 114 (116)
T 2vpk_A 81 TGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKM 114 (116)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999764
No 18
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.95 E-value=4.3e-28 Score=169.17 Aligned_cols=112 Identities=28% Similarity=0.394 Sum_probs=106.2
Q ss_pred CCcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHH
Q psy10544 2 TSQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMR 81 (181)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~ 81 (181)
.++.+.+.+++|+..+++.++++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+
T Consensus 3 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~---~~~i~l~~~~~~~f~ 79 (116)
T 3fkc_A 3 SRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA---GQVVELSFIRAEIFA 79 (116)
T ss_dssp -CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHHHHH
T ss_pred cCceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC---CCEEEeCCCCHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999999875 568999999999999
Q ss_pred HHhhhHcCCcc-cCCHHhHHHHHHHHhhcCcHHHHH
Q psy10544 82 SLLDFMYRGEV-SVDQDRLTTFLKVAESLRIKALSA 116 (181)
Q Consensus 82 ~lL~ylYtg~~-~~~~~~v~~ll~~A~~~~~~~l~~ 116 (181)
.+|+|+|||++ .++.+++.+++.+|++|+++.|++
T Consensus 80 ~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 80 EILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 99999999999 799999999999999999999874
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.94 E-value=1.5e-26 Score=162.02 Aligned_cols=113 Identities=19% Similarity=0.289 Sum_probs=100.4
Q ss_pred CCCcceeeecCccHHHHHHHHHHHHhCCCcccEEEEECCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHH
Q psy10544 1 MTSQRFCLRWNNHQSNLLSVFDQLLHDESFVDVTLAVDGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDM 80 (181)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f 80 (181)
|+........+.++..+++.++ +.++.+|||+|.++|+.|+|||.||+++|+||++ ....|.++++++++|
T Consensus 3 ~p~~p~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-------~~~~i~l~~v~~~~f 73 (119)
T 3m5b_A 3 MSLPPIRLPSPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR-------RGQWALGEGISPSTF 73 (119)
T ss_dssp ----CEEECCTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-------CEEEECCSSCCHHHH
T ss_pred CCCCCCCCCCCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-------CCCEEEeCCCCHHHH
Confidence 4445667778888999999996 5678999999999999999999999999999984 345799999999999
Q ss_pred HHHhhhHcCCcccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 81 RSLLDFMYRGEVSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 81 ~~lL~ylYtg~~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+.+|+|+|||++.++.+++.+++.+|++|+++.+++.|++..
T Consensus 74 ~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~ 115 (119)
T 3m5b_A 74 AQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRAR 115 (119)
T ss_dssp HHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999754
No 20
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.93 E-value=8e-26 Score=155.49 Aligned_cols=99 Identities=26% Similarity=0.371 Sum_probs=89.0
Q ss_pred HHhCCCcccEEEEECC----eEEEhhHHHhhccCHHHHHhhcCCCCCC-CeEEeCCCCHHHHHHHhhhHcCCcccCCHHh
Q psy10544 24 LLHDESFVDVTLAVDG----RYLKAHKIVLSACSPYFQALFVGHPDRH-PIVILKDIPYVDMRSLLDFMYRGEVSVDQDR 98 (181)
Q Consensus 24 ~~~~~~~~Dv~l~v~~----~~~~~Hk~vLa~~S~~F~~~f~~~~~~~-~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~~ 98 (181)
+++++.+|||+|.+++ +.|+|||.||+++|+||++||.+++.+. ..|.++++++++|+.+|+|+|||.+.++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~ 81 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEADT 81 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHHH
Confidence 4678899999999998 8999999999999999999999874322 8999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 99 LTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 99 v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
+.+++.+|++|+++.|++.|++++
T Consensus 82 ~~~ll~~A~~~~~~~L~~~c~~~l 105 (109)
T 2vkp_A 82 VLATLYAAKKYIVPALAKACVNFL 105 (109)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHH
Confidence 999999999999999999999764
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.58 E-value=6.5e-15 Score=107.65 Aligned_cols=112 Identities=14% Similarity=0.213 Sum_probs=90.9
Q ss_pred EEEEE-CCeEEEhhHHHhhccCHHHHHhhcC-C---CCCCCeEEeCCCCHHHHHHHhhhHcCCc----------------
Q psy10544 33 VTLAV-DGRYLKAHKIVLSACSPYFQALFVG-H---PDRHPIVILKDIPYVDMRSLLDFMYRGE---------------- 91 (181)
Q Consensus 33 v~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~-~---~~~~~~i~l~~i~~~~f~~lL~ylYtg~---------------- 91 (181)
|+|.. +|+.|.+|+.+ ++.|+||++||.+ + +.....|.+++|+..+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67764 79999999999 8899999999987 3 3344689999999999999999999877
Q ss_pred ----------ccCCHHhHHHHHHHHhhcCcHHHHHHHHHh----hhcCChhhHHHHHHHHHHcChHHH
Q psy10544 92 ----------VSVDQDRLTTFLKVAESLRIKALSALLYRG----EVSVDQDRLTTFLKVAESLRIKEL 145 (181)
Q Consensus 92 ----------~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~----~~~~~~~~~~~~l~~a~~~~~~~L 145 (181)
+.++.+++.+|+.+|++|++..|.+.|.++ +...+++.+.+++.+...|.-.+.
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe 149 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEE 149 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHH
Confidence 778899999999999999999999999965 335577777777777666654433
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.37 E-value=3.1e-12 Score=85.86 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=64.8
Q ss_pred EEEEE-CCeEEEhhHHHhhccCHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhHc-----C---Cccc---CCH
Q psy10544 33 VTLAV-DGRYLKAHKIVLSACSPYFQALFVGH----PDRHPIVILKDIPYVDMRSLLDFMY-----R---GEVS---VDQ 96 (181)
Q Consensus 33 v~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~----~~~~~~i~l~~i~~~~f~~lL~ylY-----t---g~~~---~~~ 96 (181)
|++.. +|+.|.+||.+ |+.|++|++||.+. ++....|.+++++..+++.+++|+| + +.+. ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 45554 78999999999 99999999999863 2346789999999999999999999 5 5665 889
Q ss_pred HhHHHHHHHHhhcC
Q psy10544 97 DRLTTFLKVAESLR 110 (181)
Q Consensus 97 ~~v~~ll~~A~~~~ 110 (181)
+++.+|+.+|++|+
T Consensus 83 ~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 83 EIALELLMAANFLD 96 (97)
T ss_dssp GGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhC
Confidence 99999999999986
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.35 E-value=2.9e-12 Score=91.67 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=81.4
Q ss_pred EEEEE-CCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhHcCCc--------------------
Q psy10544 33 VTLAV-DGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMRSLLDFMYRGE-------------------- 91 (181)
Q Consensus 33 v~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~~lL~ylYtg~-------------------- 91 (181)
|++.. +|+.|.+|+.+ +..|.+++.|+.... ...|.+++|+..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~ 80 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIP 80 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhh
Confidence 66765 78999999998 789999999998632 4579999999999999999998744
Q ss_pred ------ccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh----cCChhhHHHHHHH
Q psy10544 92 ------VSVDQDRLTTFLKVAESLRIKALSALLYRGEV----SVDQDRLTTFLKV 136 (181)
Q Consensus 92 ------~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~----~~~~~~~~~~l~~ 136 (181)
+.++.+++.+|+.+|++|++..|.+.|.+... ..+++...+++.+
T Consensus 81 ~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I 135 (141)
T 1fs1_B 81 VWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 135 (141)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 56788999999999999999999999986532 3344444444443
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.23 E-value=2.2e-12 Score=94.24 Aligned_cols=108 Identities=17% Similarity=0.213 Sum_probs=59.8
Q ss_pred EEEEE-CCeEEEhhHHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhhhHcCCc--------------------
Q psy10544 33 VTLAV-DGRYLKAHKIVLSACSPYFQALFVGHPDRHPIVILKDIPYVDMRSLLDFMYRGE-------------------- 91 (181)
Q Consensus 33 v~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~~~~~~~i~l~~i~~~~f~~lL~ylYtg~-------------------- 91 (181)
|+|.. +|+.|.+|+.+ +..|.+|+.||.... ....|.+++|+..+++.+++|+|+..
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i 83 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC-VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDL 83 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC-------------CCTTSCHHHHHHHHHC-------------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC-CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccchh
Confidence 56654 78999999998 788999999998653 33479999999999999999999854
Q ss_pred -------ccCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh----cCChhhHHHHHHHHHHcCh
Q psy10544 92 -------VSVDQDRLTTFLKVAESLRIKALSALLYRGEV----SVDQDRLTTFLKVAESLRI 142 (181)
Q Consensus 92 -------~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~----~~~~~~~~~~l~~a~~~~~ 142 (181)
+.++.+++.+|+.+|++|++..|.+.|.++.. ..+++.+.+++.+...+.-
T Consensus 84 ~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~ 145 (160)
T 2p1m_A 84 KAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145 (160)
T ss_dssp -----------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCH
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 35677889999999999999999999996533 3477777777777665553
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.79 E-value=2.5e-08 Score=66.84 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=65.0
Q ss_pred cEEEEE-CCeEEEhhHHHhhccCHHHHHhhcCCC-CCCCeEEeCCCCHHHHHHHhhhHcCCc--------------ccCC
Q psy10544 32 DVTLAV-DGRYLKAHKIVLSACSPYFQALFVGHP-DRHPIVILKDIPYVDMRSLLDFMYRGE--------------VSVD 95 (181)
Q Consensus 32 Dv~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~~-~~~~~i~l~~i~~~~f~~lL~ylYtg~--------------~~~~ 95 (181)
-|++.. +|..|.+++.+ |..|.+++.|+..+. .....|.+++++..+++.+++|+|.-. +.++
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd 83 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIP 83 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCC
Confidence 366665 88999999997 788999999998643 344689999999999999999998522 3567
Q ss_pred HHhHHHHHHHHhhcCc
Q psy10544 96 QDRLTTFLKVAESLRI 111 (181)
Q Consensus 96 ~~~v~~ll~~A~~~~~ 111 (181)
.+.+.+|+.+|++|++
T Consensus 84 ~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 84 TEMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 7889999999998864
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.78 E-value=6.4e-08 Score=71.01 Aligned_cols=109 Identities=14% Similarity=0.216 Sum_probs=82.5
Q ss_pred cEEEEE-CCeEEEhhHHHhhccCHHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhhhHcCCc-------------
Q psy10544 32 DVTLAV-DGRYLKAHKIVLSACSPYFQALFVGHP------DRHPIVILKDIPYVDMRSLLDFMYRGE------------- 91 (181)
Q Consensus 32 Dv~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~~------~~~~~i~l~~i~~~~f~~lL~ylYtg~------------- 91 (181)
-|+|.. +|..|.+++.+ +..|..++.|+.... .....|.|++|+..+++.+++|++.-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466654 78899999998 677999999997532 223689999999999999999996421
Q ss_pred ------------ccCCHHhHHHHHHHHhhcCcHHHHHHHHHh----hhcCChhhHHHHHHHHHHcC
Q psy10544 92 ------------VSVDQDRLTTFLKVAESLRIKALSALLYRG----EVSVDQDRLTTFLKVAESLR 141 (181)
Q Consensus 92 ------------~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~----~~~~~~~~~~~~l~~a~~~~ 141 (181)
+.++.+.+.+|+.+|++|++..|.+.|.+. +...+++...+++.+-..+.
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t 152 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFT 152 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 245667899999999999999999988854 44556666666666554443
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.76 E-value=1.5e-08 Score=67.50 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=62.5
Q ss_pred EEEEE-CCeEEEhhHHHhhccCHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhHcCCc-----------ccCCH
Q psy10544 33 VTLAV-DGRYLKAHKIVLSACSPYFQALFVGH----PDRHPIVILKDIPYVDMRSLLDFMYRGE-----------VSVDQ 96 (181)
Q Consensus 33 v~l~v-~~~~~~~Hk~vLa~~S~~F~~~f~~~----~~~~~~i~l~~i~~~~f~~lL~ylYtg~-----------~~~~~ 96 (181)
|++.. +|..|.+++.+ |..|.+++.|+... +.....|.+++++..+++.+++|+|.-. ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 55655 88999999997 78899999999863 2334689999999999999999997522 35677
Q ss_pred HhHHHHHHHHhhcCc
Q psy10544 97 DRLTTFLKVAESLRI 111 (181)
Q Consensus 97 ~~v~~ll~~A~~~~~ 111 (181)
+.+.+|+.+|++|.+
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 889999999998864
No 28
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.75 E-value=5e-08 Score=66.30 Aligned_cols=89 Identities=21% Similarity=0.325 Sum_probs=72.7
Q ss_pred cEEEEECCeEEEhhHHHhhccC-HHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhhhHcCCcccCCHH-hHHHHH
Q psy10544 32 DVTLAVDGRYLKAHKIVLSACS-PYFQALFVGHP------DRHPIVILKDIPYVDMRSLLDFMYRGEVSVDQD-RLTTFL 103 (181)
Q Consensus 32 Dv~l~v~~~~~~~Hk~vLa~~S-~~F~~~f~~~~------~~~~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~-~v~~ll 103 (181)
-|+|.|+|+.|...+..|+... .+|..||.+.. ++..++-+ |-++..|+.+|+|+.+|++.++.+ ....++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 3678999999999999999875 58899987641 23445655 579999999999999999876543 347899
Q ss_pred HHHhhcCcHHHHHHHHHh
Q psy10544 104 KVAESLRIKALSALLYRG 121 (181)
Q Consensus 104 ~~A~~~~~~~l~~~c~~~ 121 (181)
+-|++|+++.|++.|...
T Consensus 86 ~Ea~fy~l~~L~~~l~~~ 103 (107)
T 3drz_A 86 EEAEFYNITSLIKLVKDK 103 (107)
T ss_dssp HHHHHHTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHH
Confidence 999999999999999853
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.33 E-value=1.4e-06 Score=59.59 Aligned_cols=79 Identities=16% Similarity=0.182 Sum_probs=62.6
Q ss_pred cEEEE-ECCeEEEhhHHHhhccCHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhhhHcCCc-----------ccCC
Q psy10544 32 DVTLA-VDGRYLKAHKIVLSACSPYFQALFVGH----PDRHPIVILKDIPYVDMRSLLDFMYRGE-----------VSVD 95 (181)
Q Consensus 32 Dv~l~-v~~~~~~~Hk~vLa~~S~~F~~~f~~~----~~~~~~i~l~~i~~~~f~~lL~ylYtg~-----------~~~~ 95 (181)
-|+|. .+|..|.+++.+ +..|..++.|+... +.....|.|++|+..+++.+++|+|.-. +.++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 46666 478999999995 67899999999853 2233689999999999999999996521 3577
Q ss_pred HHhHHHHHHHHhhcCc
Q psy10544 96 QDRLTTFLKVAESLRI 111 (181)
Q Consensus 96 ~~~v~~ll~~A~~~~~ 111 (181)
.+.+.+|+.+|++|.+
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8889999999999864
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=98.00 E-value=8.3e-06 Score=61.05 Aligned_cols=88 Identities=22% Similarity=0.349 Sum_probs=70.6
Q ss_pred EEEEECCeEEEhhHHHhhccC-HHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhhhHcCCcccCCHH-hHHHHHH
Q psy10544 33 VTLAVDGRYLKAHKIVLSACS-PYFQALFVGHP------DRHPIVILKDIPYVDMRSLLDFMYRGEVSVDQD-RLTTFLK 104 (181)
Q Consensus 33 v~l~v~~~~~~~Hk~vLa~~S-~~F~~~f~~~~------~~~~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~-~v~~ll~ 104 (181)
|+|.|+|+.|...+..|.... .+|..||.+.. ++..++-| |-++..|..+|+|+.+|++.++.+ ....+++
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~e 92 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE 92 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHHH
Confidence 668999999999999998864 47888887641 23445655 469999999999999999876543 2467999
Q ss_pred HHhhcCcHHHHHHHHHh
Q psy10544 105 VAESLRIKALSALLYRG 121 (181)
Q Consensus 105 ~A~~~~~~~l~~~c~~~ 121 (181)
-|++|+++.|.+.|...
T Consensus 93 EA~FygL~~Lv~~l~~~ 109 (202)
T 3drx_A 93 EAEFYNITSLIKLVKDK 109 (202)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHH
Confidence 99999999999999843
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=97.35 E-value=0.00018 Score=49.21 Aligned_cols=83 Identities=13% Similarity=0.073 Sum_probs=63.9
Q ss_pred cEEEEECCeEEEhhHHHhhccC-HHHHHhhcCCC---CCCCeEEeCCCCHHHHHHHhhhHcCCcccCCHH-hHHHHHHHH
Q psy10544 32 DVTLAVDGRYLKAHKIVLSACS-PYFQALFVGHP---DRHPIVILKDIPYVDMRSLLDFMYRGEVSVDQD-RLTTFLKVA 106 (181)
Q Consensus 32 Dv~l~v~~~~~~~Hk~vLa~~S-~~F~~~f~~~~---~~~~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~-~v~~ll~~A 106 (181)
=|+|.|+|+.|...+..|.... .++..|+.+.. .+..++-++ -++..|..+|.|+.+|++.++.+ .+..+++-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD-Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD-RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC-SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe-cChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 3778999999999999998764 34556665431 344566664 69999999999999999876543 467899999
Q ss_pred hhcCcHHHH
Q psy10544 107 ESLRIKALS 115 (181)
Q Consensus 107 ~~~~~~~l~ 115 (181)
++|+++...
T Consensus 85 ~fy~i~~~~ 93 (115)
T 3kvt_A 85 EFWGLDSNQ 93 (115)
T ss_dssp HHHTCCGGG
T ss_pred HHhCCChHH
Confidence 999998753
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=97.32 E-value=0.0002 Score=49.56 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=62.3
Q ss_pred cEEEEECCeEEEhhHHHhhccCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhhhHcCCcccCCHH-hHHHHHH
Q psy10544 32 DVTLAVDGRYLKAHKIVLSACSPYFQALFVGH------PDRHPIVILKDIPYVDMRSLLDFMYRGEVSVDQD-RLTTFLK 104 (181)
Q Consensus 32 Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~------~~~~~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~-~v~~ll~ 104 (181)
-|+|.|+|+.|...+..|..... .+|... .....++-++ -++..|..+|.|+-+|++.+..+ .+..+++
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~FiD-Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~~ 89 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLHYPRYECISAYDD 89 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEEC-SCHHHHHHHHHHHHHSCBCCCTTSCHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEEc-CChHHHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 47789999999999999976532 233321 1233456554 59999999999999999876544 4788999
Q ss_pred HHhhcCcHHHH-HHHH
Q psy10544 105 VAESLRIKALS-ALLY 119 (181)
Q Consensus 105 ~A~~~~~~~l~-~~c~ 119 (181)
-|++|+++.+. +.|.
T Consensus 90 Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 90 ELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHTTCCGGGBCHHH
T ss_pred HHHHcCCChHHHHHHH
Confidence 99999998873 4443
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=97.10 E-value=0.00049 Score=45.81 Aligned_cols=86 Identities=12% Similarity=0.097 Sum_probs=62.0
Q ss_pred EEEEECCeEEEhhHHHhhccC-HHHHHhhcCC---CCCCCeEEeCCCCHHHHHHHhhhHcC-CcccCCHH-hHHHHHHHH
Q psy10544 33 VTLAVDGRYLKAHKIVLSACS-PYFQALFVGH---PDRHPIVILKDIPYVDMRSLLDFMYR-GEVSVDQD-RLTTFLKVA 106 (181)
Q Consensus 33 v~l~v~~~~~~~Hk~vLa~~S-~~F~~~f~~~---~~~~~~i~l~~i~~~~f~~lL~ylYt-g~~~~~~~-~v~~ll~~A 106 (181)
|+|.|+|+.|...+..|...- ..+.+|+... .....++-+ |-++..|+.+|.|+-+ |++.++.+ .+..+++-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 678999999999999997652 2333344321 124456666 4589999999999998 88866443 467899999
Q ss_pred hhcCcHHHH-HHHH
Q psy10544 107 ESLRIKALS-ALLY 119 (181)
Q Consensus 107 ~~~~~~~l~-~~c~ 119 (181)
++|+++.+. +.|.
T Consensus 82 ~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 82 KFYELGENAFERYR 95 (100)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 999998753 4443
No 34
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=97.05 E-value=0.00068 Score=47.90 Aligned_cols=79 Identities=14% Similarity=0.168 Sum_probs=60.6
Q ss_pred cEEEEECCeEEEhhHHHhhccCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhhhHcCCcccCCHH-hHHHHHH
Q psy10544 32 DVTLAVDGRYLKAHKIVLSACSPYFQALFVGH------PDRHPIVILKDIPYVDMRSLLDFMYRGEVSVDQD-RLTTFLK 104 (181)
Q Consensus 32 Dv~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~------~~~~~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~-~v~~ll~ 104 (181)
-|+|.|+|+.|...+..|..... .||... ..+..++-++ -++..|+.+|+|+-+|++.+..+ .+..+++
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFiD-Rdp~~F~~ILnflR~G~l~~p~~~~~~~l~e 111 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLHYPRYECISAYDD 111 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEEC-SCHHHHHHHHHHHHHSSBCCCTTSCHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEEe-CCcHHHHHHHHHHhcCCcCCCCCcCHHHHHH
Confidence 47789999999999999977532 233321 1234566665 59999999999999999876543 4788999
Q ss_pred HHhhcCcHHH
Q psy10544 105 VAESLRIKAL 114 (181)
Q Consensus 105 ~A~~~~~~~l 114 (181)
-|++|+++.+
T Consensus 112 Ea~fy~i~~l 121 (140)
T 2nz0_B 112 ELAFYGILPE 121 (140)
T ss_dssp HHHHHTCCGG
T ss_pred HHHHcCCChH
Confidence 9999999886
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=96.71 E-value=0.00047 Score=46.31 Aligned_cols=83 Identities=11% Similarity=0.120 Sum_probs=61.4
Q ss_pred EEEEECCeEEEhhHHHhhccCHHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhhhHcCCcccCCHH-hHHHHHHH
Q psy10544 33 VTLAVDGRYLKAHKIVLSACSPYFQALFVGHP------DRHPIVILKDIPYVDMRSLLDFMYRGEVSVDQD-RLTTFLKV 105 (181)
Q Consensus 33 v~l~v~~~~~~~Hk~vLa~~S~~F~~~f~~~~------~~~~~i~l~~i~~~~f~~lL~ylYtg~~~~~~~-~v~~ll~~ 105 (181)
|+|.|+|+.|...+..|..... +|+.... ....++-++ -++..|..+|.|+-+|++.++.+ .+..+++-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD-Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD-RDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC-SCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe-CCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 6899999999999999987532 2333211 233456665 49999999999999999876543 47889999
Q ss_pred HhhcCcHHHH-HHHH
Q psy10544 106 AESLRIKALS-ALLY 119 (181)
Q Consensus 106 A~~~~~~~l~-~~c~ 119 (181)
|++|+++.+. +.|.
T Consensus 78 a~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 78 LAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHTCCSCCBCHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 9999998863 4443
No 36
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.88 E-value=0.1 Score=34.50 Aligned_cols=31 Identities=10% Similarity=-0.038 Sum_probs=24.5
Q ss_pred ccCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 92 VSVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 92 ~~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
-.++.+|...++.+|+.|+++.|.+.|.+++
T Consensus 6 ~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi 36 (105)
T 2eqx_A 6 SGVQVGNCLQVMWLADRHSDPELYTAAKHCA 36 (105)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3567788888888888888888888888765
No 37
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=92.69 E-value=0.11 Score=44.12 Aligned_cols=83 Identities=10% Similarity=0.080 Sum_probs=58.6
Q ss_pred cEEEEECCeEEEhhHHHhhccCHH-HHHhhcCC---CCCCCeEEeCCCCHHHHHHHhhhHcC-CcccCCHH-hHHHHHHH
Q psy10544 32 DVTLAVDGRYLKAHKIVLSACSPY-FQALFVGH---PDRHPIVILKDIPYVDMRSLLDFMYR-GEVSVDQD-RLTTFLKV 105 (181)
Q Consensus 32 Dv~l~v~~~~~~~Hk~vLa~~S~~-F~~~f~~~---~~~~~~i~l~~i~~~~f~~lL~ylYt-g~~~~~~~-~v~~ll~~ 105 (181)
-|+|.|+|++|...+..|...-.- +..++... ..+..++-+ |-++..|+.+|.|+.+ |++..+.+ ....+++-
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E 131 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEE 131 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHHH
Confidence 366799999999999999764321 11112111 134456666 5599999999999999 99876543 35678899
Q ss_pred HhhcCcHHHH
Q psy10544 106 AESLRIKALS 115 (181)
Q Consensus 106 A~~~~~~~l~ 115 (181)
|++|++++..
T Consensus 132 ~~f~~i~~~~ 141 (514)
T 2r9r_B 132 IRFYELGEEA 141 (514)
T ss_dssp HHHTTCCHHH
T ss_pred HHhcCCCHHH
Confidence 9999997753
No 38
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=86.02 E-value=0.97 Score=30.82 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=29.5
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhccCC
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERDTEG 157 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~~ 157 (181)
...++.+|+..++..|+.|++..|.+.|...+...-
T Consensus 84 ~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l 119 (135)
T 2yy9_A 84 HLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTS 119 (135)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---
T ss_pred CCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 346788999999999999999999999999876554
No 39
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.83 E-value=1.5 Score=28.57 Aligned_cols=34 Identities=18% Similarity=0.094 Sum_probs=29.7
Q ss_pred hcCChhhHHHHHHHHHHcChHHHHHHhHHhhccC
Q psy10544 123 VSVDQDRLTTFLKVAESLRIKELVSNVKAERDTE 156 (181)
Q Consensus 123 ~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~ 156 (181)
..++.+||+.++.+|+.|++..|.+.+...+..+
T Consensus 6 ~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~n 39 (105)
T 2eqx_A 6 SGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTH 39 (105)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999988877543
No 40
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=79.84 E-value=3.4 Score=27.23 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=29.3
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhcc
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERDT 155 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~ 155 (181)
...++.+|+..++..|+.|++..|.+.|...+..
T Consensus 85 ~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~l 118 (119)
T 2q81_A 85 KLSLSPENVDDVLAVATFLQMQDIITACHALKSL 118 (119)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 3467788999999999999999999999887653
No 41
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=79.50 E-value=3.5 Score=26.46 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=28.0
Q ss_pred hcCChhhHHHHHHHHHHcChHHHHHHhHHhhc
Q psy10544 123 VSVDQDRLTTFLKVAESLRIKELVSNVKAERD 154 (181)
Q Consensus 123 ~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~ 154 (181)
..++.+++..++..|++|++..|.+.|...+.
T Consensus 75 ~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 75 IDLEADTVLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 35677999999999999999999999887764
No 42
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=78.68 E-value=2.8 Score=27.68 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=28.1
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhccC
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERDTE 156 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~ 156 (181)
...++.+|+..++..|+.|++..|.+.|...+...
T Consensus 83 ~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 83 HLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 33577889999999999999999999998876543
No 43
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=77.97 E-value=4 Score=27.08 Aligned_cols=34 Identities=9% Similarity=0.229 Sum_probs=29.3
Q ss_pred hcCChhhHHHHHHHHHHcChHHHHHHhHHhhccC
Q psy10544 123 VSVDQDRLTTFLKVAESLRIKELVSNVKAERDTE 156 (181)
Q Consensus 123 ~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~ 156 (181)
..++.+++..++..|+.|++..|.+.|...+..+
T Consensus 93 ~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 93 LNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3567889999999999999999999998877543
No 44
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=77.89 E-value=4.8 Score=26.34 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=27.3
Q ss_pred hcCChhhHHHHHHHHHHcChHHHHHHhHHhh
Q psy10544 123 VSVDQDRLTTFLKVAESLRIKELVSNVKAER 153 (181)
Q Consensus 123 ~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~ 153 (181)
..++.+++..++..|++|++..|.+.|...+
T Consensus 89 ~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 LTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 3567889999999999999999999988765
No 45
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=77.33 E-value=4.5 Score=26.37 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=28.2
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhc
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERD 154 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~ 154 (181)
...++.+++..++..|+.|++..|.+.|...+.
T Consensus 83 ~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 83 TLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 335678899999999999999999999987653
No 46
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=73.47 E-value=6.6 Score=25.82 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=28.3
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhc
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERD 154 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~ 154 (181)
...++.+++..++..|+.|++..|.+.|...+.
T Consensus 86 ~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 118 (121)
T 1buo_A 86 TLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 335678999999999999999999999887654
No 47
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=71.88 E-value=4.5 Score=26.81 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=28.4
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhcc
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERDT 155 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~ 155 (181)
...++.+|+..++..|+.|++..|.+.|...+..
T Consensus 84 ~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 84 SVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp CEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 3467889999999999999999999999887643
No 48
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=70.73 E-value=7.1 Score=26.33 Aligned_cols=36 Identities=8% Similarity=0.086 Sum_probs=30.9
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhccCC
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERDTEG 157 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~~ 157 (181)
...++.+|+..++..|+.|++..|.+.|...+...-
T Consensus 98 ~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 98 KLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred CcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 446788999999999999999999999998876543
No 49
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=66.73 E-value=5.2 Score=27.83 Aligned_cols=30 Identities=10% Similarity=0.021 Sum_probs=27.0
Q ss_pred cCCHHhHHHHHHHHhhcCcHHHHHHHHHhh
Q psy10544 93 SVDQDRLTTFLKVAESLRIKALSALLYRGE 122 (181)
Q Consensus 93 ~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~ 122 (181)
.++.+|+..++..|+.++.+.|++.|.+++
T Consensus 131 ~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i 160 (172)
T 3htm_A 131 NLSVENAAEILILADLHSADQLKTQAVDFI 160 (172)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 367889999999999999999999999764
No 50
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=65.42 E-value=6.1 Score=27.03 Aligned_cols=30 Identities=13% Similarity=0.208 Sum_probs=26.4
Q ss_pred cCChhhHHHHHHHHHHcChHHHHHHhHHhh
Q psy10544 124 SVDQDRLTTFLKVAESLRIKELVSNVKAER 153 (181)
Q Consensus 124 ~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~ 153 (181)
.++.+++..++..|+.|++..|.+.|...+
T Consensus 114 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 567889999999999999999999887653
No 51
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=57.99 E-value=8.3 Score=29.79 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=27.4
Q ss_pred cCCHHhHHHHHHHHhhcCcHHHHHHHHHhhh
Q psy10544 93 SVDQDRLTTFLKVAESLRIKALSALLYRGEV 123 (181)
Q Consensus 93 ~~~~~~v~~ll~~A~~~~~~~l~~~c~~~~~ 123 (181)
.++.+|+..++.+|+.++++.|++.|.+++.
T Consensus 271 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 301 (312)
T 3hqi_A 271 NLSVENAAEILILADLHSADQLKTQAVDFIN 301 (312)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3677899999999999999999999997753
No 52
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=53.02 E-value=15 Score=24.53 Aligned_cols=33 Identities=9% Similarity=0.047 Sum_probs=25.9
Q ss_pred cCChhhHHHHHHHHHHcChHHHHHHhHHhhccC
Q psy10544 124 SVDQDRLTTFLKVAESLRIKELVSNVKAERDTE 156 (181)
Q Consensus 124 ~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~ 156 (181)
.++.+++..++..|+.|++..|.+.|...+...
T Consensus 90 ~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 122 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKYALERLKVMCEDALCSN 122 (145)
T ss_dssp TTGGGTHHHHHHHHHHTTCHHHHHHHHCC----
T ss_pred CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence 456788999999999999999999888876643
No 53
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=45.27 E-value=40 Score=23.35 Aligned_cols=30 Identities=30% Similarity=0.286 Sum_probs=25.5
Q ss_pred cCChhhHHHHHHHHHHcChHHHHHHhHHhh
Q psy10544 124 SVDQDRLTTFLKVAESLRIKELVSNVKAER 153 (181)
Q Consensus 124 ~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~ 153 (181)
.++.+++.+++..|...+++.|...+...+
T Consensus 93 ~id~~~l~eLl~AAnyL~I~~Lld~~c~~v 122 (159)
T 2ast_A 93 KVDQGTLFELILAANYLDIKGLLDVTCKTV 122 (159)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 589999999999999999999976665544
No 54
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=42.90 E-value=7.2 Score=25.92 Aligned_cols=33 Identities=15% Similarity=0.111 Sum_probs=23.5
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhc
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERD 154 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~ 154 (181)
...++.+|+..++..|+.|++..|.+.|...+.
T Consensus 93 ~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~ 125 (129)
T 3ga1_A 93 RLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFL 125 (129)
T ss_dssp EEECCTTTHHHHHHHHHHTTBTTSSCC------
T ss_pred ccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 346788899999999999999999877766554
No 55
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=41.64 E-value=40 Score=25.00 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=29.8
Q ss_pred hhcCChhhHHHHHHHHHHcChHHHHHHhHHhhccCC
Q psy10544 122 EVSVDQDRLTTFLKVAESLRIKELVSNVKAERDTEG 157 (181)
Q Consensus 122 ~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~~~~~ 157 (181)
...++.+++..++..|+.|++..|.+.|...+...-
T Consensus 96 ~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 96 QIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred CCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 336788999999999999999999999988876543
No 56
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=39.49 E-value=25 Score=26.59 Aligned_cols=29 Identities=7% Similarity=0.004 Sum_probs=25.8
Q ss_pred cCCHHhHHHHHHHHhhcCcHHHHHHHHHh
Q psy10544 93 SVDQDRLTTFLKVAESLRIKALSALLYRG 121 (181)
Q Consensus 93 ~~~~~~v~~ll~~A~~~~~~~l~~~c~~~ 121 (181)
.++.+|+..++..|+.++++.|.+.|.++
T Consensus 138 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~ 166 (279)
T 3i3n_A 138 KLHLSNCVAIHSLAHMYTLSQLALKAADM 166 (279)
T ss_dssp HCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCcchHHHHHHHHHHcCcHHHHHHHHHH
Confidence 46788999999999999999999999754
No 57
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=35.97 E-value=72 Score=21.56 Aligned_cols=59 Identities=19% Similarity=0.124 Sum_probs=38.3
Q ss_pred CCHHhHHHHHHHHhhcCcHH---------------HHHHHHHhhhcCChhhHHHHHHHHHHcChHHHHHHhHHhh
Q psy10544 94 VDQDRLTTFLKVAESLRIKA---------------LSALLYRGEVSVDQDRLTTFLKVAESLRIKELVSNVKAER 153 (181)
Q Consensus 94 ~~~~~v~~ll~~A~~~~~~~---------------l~~~c~~~~~~~~~~~~~~~l~~a~~~~~~~L~~~~~~~~ 153 (181)
++..-+..+++.+....-.. +.+--.+|. .++.+++.+++..|+..+++.|...+...+
T Consensus 44 V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~-~vd~~~l~eLi~AAnyL~I~~Lldl~c~~v 117 (141)
T 1fs1_B 44 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL-KVDQGTLFELILAANYLDIKGLLDVTCKTV 117 (141)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT-CSCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH-hCCHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 45566677777776654111 111111233 589999999999999999999966555444
No 58
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=21.37 E-value=44 Score=23.38 Aligned_cols=18 Identities=17% Similarity=0.576 Sum_probs=15.2
Q ss_pred CCCCHHHHHHHhhhHcCC
Q psy10544 73 KDIPYVDMRSLLDFMYRG 90 (181)
Q Consensus 73 ~~i~~~~f~~lL~ylYtg 90 (181)
...+.+....+++|+|.|
T Consensus 96 ~~L~~e~~D~LMKYiYkG 113 (151)
T 1k8k_G 96 QSLDKNGVDLLMKYIYKG 113 (151)
T ss_dssp HTSCHHHHHHHHHHHHHH
T ss_pred HHhChhhhhHHHHHHHHh
Confidence 357889999999999976
No 59
>2gsl_A Hypothetical protein; alpha-helical protein, structural genomics, PSI, protein STR initiative; 2.60A {Fusobacterium nucleatum subsp}
Probab=20.80 E-value=1.2e+02 Score=20.60 Aligned_cols=29 Identities=7% Similarity=0.280 Sum_probs=19.9
Q ss_pred CHHHHHHHhhhHcCCcccCCHHhHHHHHHHHh
Q psy10544 76 PYVDMRSLLDFMYRGEVSVDQDRLTTFLKVAE 107 (181)
Q Consensus 76 ~~~~f~~lL~ylYtg~~~~~~~~v~~ll~~A~ 107 (181)
-+++|+.++-|+|- +-..+.+.+++...-
T Consensus 98 ~At~fEALiGaLYL---d~~~erl~~ll~~~~ 126 (137)
T 2gsl_A 98 EATALEAIIGAMYL---LKKEEEIKKIINIVI 126 (137)
T ss_dssp HHHHHHHHHHHHHH---TTCHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHH---CCCHHHHHHHHHHHH
Confidence 57899999999993 334555655555443
Done!