Query psy10545
Match_columns 1428
No_of_seqs 837 out of 4877
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 21:11:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 1.3E-58 4.6E-63 580.2 34.7 488 711-1198 1-488 (501)
2 4hd1_A Squalene synthase HPNC; 100.0 8.6E-45 2.9E-49 413.6 21.0 228 1189-1428 25-252 (294)
3 3acx_A Dehydrosqualene synthas 100.0 4.5E-44 1.5E-48 409.0 22.0 229 1187-1428 22-257 (293)
4 3vj8_A Squalene synthase; farn 100.0 1.3E-36 4.4E-41 351.0 15.9 218 1187-1413 21-256 (343)
5 3ka7_A Oxidoreductase; structu 100.0 6.2E-33 2.1E-37 339.7 39.6 400 712-1198 1-424 (425)
6 3nrn_A Uncharacterized protein 100.0 1.3E-31 4.4E-36 327.3 32.5 394 712-1197 1-403 (421)
7 2ivd_A PPO, PPOX, protoporphyr 100.0 1.2E-29 4.1E-34 315.5 21.4 418 710-1199 15-471 (478)
8 2yg5_A Putrescine oxidase; oxi 100.0 5.3E-28 1.8E-32 298.4 31.5 425 709-1198 3-448 (453)
9 1s3e_A Amine oxidase [flavin-c 100.0 8.1E-29 2.8E-33 310.8 23.1 426 711-1198 4-451 (520)
10 2bcg_G Secretory pathway GDP d 99.9 3.9E-27 1.3E-31 289.1 24.9 389 709-1198 9-438 (453)
11 2vvm_A Monoamine oxidase N; FA 99.9 1.4E-26 4.8E-31 289.0 28.5 420 712-1198 40-482 (495)
12 1sez_A Protoporphyrinogen oxid 99.9 6.1E-28 2.1E-32 302.1 15.8 426 710-1198 12-490 (504)
13 3i6d_A Protoporphyrinogen oxid 99.9 2.6E-27 8.9E-32 294.0 18.7 422 711-1198 5-465 (470)
14 3nks_A Protoporphyrinogen oxid 99.9 1.2E-26 4.2E-31 288.4 20.2 424 711-1199 2-472 (477)
15 3lov_A Protoporphyrinogen oxid 99.9 4E-26 1.4E-30 283.4 23.2 420 709-1198 2-462 (475)
16 1d5t_A Guanine nucleotide diss 99.9 9.2E-26 3.2E-30 275.0 24.5 389 710-1198 5-427 (433)
17 1rsg_A FMS1 protein; FAD bindi 99.9 3.2E-26 1.1E-30 286.6 16.3 276 709-1027 6-305 (516)
18 4gde_A UDP-galactopyranose mut 99.9 8.4E-26 2.9E-30 283.7 13.8 436 708-1203 7-481 (513)
19 1b37_A Protein (polyamine oxid 99.9 5.8E-25 2E-29 272.3 18.8 420 710-1198 3-455 (472)
20 2jae_A L-amino acid oxidase; o 99.9 1.6E-24 5.6E-29 269.8 20.0 415 710-1198 10-482 (489)
21 2iid_A L-amino-acid oxidase; f 99.9 1.2E-23 4.2E-28 262.6 20.3 427 710-1198 32-481 (498)
22 4dsg_A UDP-galactopyranose mut 99.9 1.1E-23 3.9E-28 259.9 17.3 407 710-1198 8-452 (484)
23 3k7m_X 6-hydroxy-L-nicotine ox 99.9 2.8E-22 9.5E-27 245.6 25.2 405 711-1199 1-424 (431)
24 2b9w_A Putative aminooxidase; 99.9 2.6E-22 9E-27 245.2 23.5 408 710-1198 5-423 (424)
25 3oz2_A Digeranylgeranylglycero 99.9 3E-21 1E-25 233.5 24.6 286 312-640 5-311 (397)
26 2z3y_A Lysine-specific histone 99.9 7.5E-22 2.6E-26 252.8 19.5 238 922-1198 392-655 (662)
27 2xag_A Lysine-specific histone 99.9 7.7E-22 2.6E-26 254.5 19.5 238 922-1198 563-826 (852)
28 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 1.7E-21 5.7E-26 230.7 19.0 231 923-1198 104-339 (342)
29 3p1w_A Rabgdi protein; GDI RAB 99.9 9E-21 3.1E-25 228.5 23.8 327 710-1086 19-386 (475)
30 4gut_A Lysine-specific histone 99.9 1.7E-21 5.7E-26 250.3 16.1 420 709-1198 334-774 (776)
31 3cgv_A Geranylgeranyl reductas 99.9 3E-20 1E-24 224.8 26.0 323 312-678 5-352 (397)
32 1vg0_A RAB proteins geranylger 99.8 1E-18 3.5E-23 215.9 30.1 274 757-1085 223-508 (650)
33 3atr_A Conserved archaeal prot 99.8 2.5E-19 8.6E-24 220.2 24.7 344 311-702 6-380 (453)
34 3ayj_A Pro-enzyme of L-phenyla 99.8 3.6E-19 1.2E-23 222.8 26.2 104 922-1027 338-492 (721)
35 3rp8_A Flavoprotein monooxygen 99.8 2.6E-20 8.9E-25 226.1 15.4 326 311-681 23-375 (407)
36 3fmw_A Oxygenase; mithramycin, 99.8 6.7E-20 2.3E-24 229.8 16.8 316 310-679 48-397 (570)
37 2qa2_A CABE, polyketide oxygen 99.8 6.8E-19 2.3E-23 217.9 23.1 279 310-640 11-316 (499)
38 2qa1_A PGAE, polyketide oxygen 99.8 9.1E-19 3.1E-23 216.8 22.8 279 310-640 10-315 (500)
39 1i8t_A UDP-galactopyranose mut 99.8 3.7E-19 1.3E-23 211.5 10.9 248 711-1026 1-259 (367)
40 1v0j_A UDP-galactopyranose mut 99.8 2E-19 6.9E-24 216.6 8.4 295 711-1085 7-317 (399)
41 2x3n_A Probable FAD-dependent 99.8 7.3E-19 2.5E-23 212.7 11.0 282 312-641 7-321 (399)
42 3e1t_A Halogenase; flavoprotei 99.8 9.6E-18 3.3E-22 209.1 20.5 290 311-641 7-331 (512)
43 2bi7_A UDP-galactopyranose mut 99.8 4.2E-18 1.4E-22 203.6 16.3 245 710-1024 2-260 (384)
44 3ihg_A RDME; flavoenzyme, anth 99.8 1.2E-17 4E-22 209.9 20.4 288 311-640 5-335 (535)
45 3nix_A Flavoprotein/dehydrogen 99.7 3.3E-17 1.1E-21 199.8 18.5 289 312-641 6-323 (421)
46 1pn0_A Phenol 2-monooxygenase; 99.7 1.8E-16 6.2E-21 202.3 23.6 322 311-678 8-425 (665)
47 1yvv_A Amine oxidase, flavin-c 99.7 2.1E-16 7.2E-21 186.3 21.9 321 711-1198 2-324 (336)
48 3alj_A 2-methyl-3-hydroxypyrid 99.7 2.1E-17 7.3E-22 198.2 12.4 284 312-642 12-317 (379)
49 1k0i_A P-hydroxybenzoate hydro 99.7 6.6E-18 2.2E-22 204.0 7.8 290 312-641 3-314 (394)
50 3hdq_A UDP-galactopyranose mut 99.7 7.6E-17 2.6E-21 191.0 14.0 289 710-1087 28-329 (397)
51 4hb9_A Similarities with proba 99.7 2.1E-17 7.3E-22 200.8 9.1 153 314-497 4-167 (412)
52 3i3l_A Alkylhalidase CMLS; fla 99.7 4.8E-17 1.6E-21 204.1 11.7 290 311-641 23-343 (591)
53 2xdo_A TETX2 protein; tetracyc 99.7 2.1E-15 7.2E-20 182.1 24.9 288 311-642 26-350 (398)
54 2r0c_A REBC; flavin adenine di 99.7 3.3E-16 1.1E-20 196.5 15.4 296 298-639 14-346 (549)
55 3c4a_A Probable tryptophan hyd 99.7 1E-15 3.5E-20 183.7 19.0 277 313-642 2-298 (381)
56 2vou_A 2,6-dihydroxypyridine h 99.7 6.2E-16 2.1E-20 186.7 16.5 143 312-497 6-154 (397)
57 3c96_A Flavin-containing monoo 99.6 6.9E-16 2.4E-20 187.1 15.5 290 312-642 5-339 (410)
58 2pyx_A Tryptophan halogenase; 99.6 2E-15 6.9E-20 188.8 18.3 191 438-641 168-380 (526)
59 2dkh_A 3-hydroxybenzoate hydro 99.6 3.4E-15 1.2E-19 190.4 19.4 292 311-640 32-380 (639)
60 2aqj_A Tryptophan halogenase, 99.6 4.4E-14 1.5E-18 177.2 24.8 188 438-642 158-366 (538)
61 2e4g_A Tryptophan halogenase; 99.6 4.2E-14 1.4E-18 177.5 23.1 189 438-642 187-397 (550)
62 2weu_A Tryptophan 5-halogenase 99.6 8.2E-14 2.8E-18 174.0 25.4 189 438-642 166-374 (511)
63 2gmh_A Electron transfer flavo 99.6 2.8E-14 9.4E-19 179.8 20.6 293 305-640 29-381 (584)
64 2e1m_A L-glutamate oxidase; L- 99.5 1.1E-13 3.8E-18 162.4 20.2 267 709-984 42-369 (376)
65 3cgv_A Geranylgeranyl reductas 99.5 2E-12 7E-17 155.9 26.2 230 7-241 3-312 (397)
66 3ihm_A Styrene monooxygenase A 99.5 1.6E-13 5.5E-18 166.9 13.4 297 297-643 7-345 (430)
67 3oz2_A Digeranylgeranylglycero 99.3 2.1E-10 7.2E-15 138.0 25.1 228 8-240 4-311 (397)
68 3atr_A Conserved archaeal prot 99.1 2.8E-09 9.4E-14 130.6 23.7 296 6-310 4-389 (453)
69 3nyc_A D-arginine dehydrogenas 99.1 1.2E-10 4.1E-15 139.4 11.2 65 922-988 142-209 (381)
70 3dme_A Conserved exported prot 99.1 3.8E-10 1.3E-14 134.3 12.9 59 930-988 149-209 (369)
71 3dje_A Fructosyl amine: oxygen 99.1 6.7E-10 2.3E-14 135.7 14.2 67 922-988 148-221 (438)
72 3da1_A Glycerol-3-phosphate de 99.0 3.9E-09 1.3E-13 132.2 17.5 59 930-988 169-232 (561)
73 3v76_A Flavoprotein; structura 99.0 1.3E-09 4.6E-14 130.8 12.3 65 922-988 123-187 (417)
74 3ps9_A TRNA 5-methylaminomethy 99.0 2.9E-09 9.8E-14 137.1 14.8 66 922-988 405-473 (676)
75 2bry_A NEDD9 interacting prote 98.9 3.6E-10 1.2E-14 139.6 5.8 128 311-498 92-232 (497)
76 2i0z_A NAD(FAD)-utilizing dehy 98.9 3.4E-09 1.2E-13 129.4 13.1 60 929-988 132-191 (447)
77 3pvc_A TRNA 5-methylaminomethy 98.9 2.1E-09 7E-14 138.6 11.6 65 922-987 400-468 (689)
78 2gag_B Heterotetrameric sarcos 98.9 2.2E-09 7.6E-14 129.6 11.2 66 922-988 162-230 (405)
79 3ihg_A RDME; flavoenzyme, anth 98.9 2.5E-08 8.5E-13 124.9 20.8 64 931-995 120-190 (535)
80 1y56_B Sarcosine oxidase; dehy 98.9 9.4E-09 3.2E-13 123.0 14.7 58 930-988 148-205 (382)
81 1yvv_A Amine oxidase, flavin-c 98.8 1.8E-08 6.2E-13 118.1 15.3 170 460-641 121-324 (336)
82 4at0_A 3-ketosteroid-delta4-5a 98.8 2.5E-08 8.5E-13 123.9 17.0 60 929-988 200-264 (510)
83 3kkj_A Amine oxidase, flavin-c 98.8 2.1E-09 7.1E-14 122.3 6.2 59 711-769 2-60 (336)
84 1pj5_A N,N-dimethylglycine oxi 98.8 8E-09 2.7E-13 136.1 12.7 66 922-988 139-207 (830)
85 3rp8_A Flavoprotein monooxygen 98.8 9.4E-08 3.2E-12 115.3 20.8 232 6-243 21-338 (407)
86 1y0p_A Fumarate reductase flav 98.8 4.6E-08 1.6E-12 123.2 17.5 58 931-988 255-317 (571)
87 2uzz_A N-methyl-L-tryptophan o 98.8 7.8E-09 2.7E-13 123.2 9.9 65 922-988 137-204 (372)
88 2gqf_A Hypothetical protein HI 98.8 2.7E-08 9.1E-13 119.2 13.7 64 923-988 101-168 (401)
89 1qo8_A Flavocytochrome C3 fuma 98.8 4.5E-08 1.5E-12 123.1 16.3 60 930-989 249-313 (566)
90 1ryi_A Glycine oxidase; flavop 98.8 3.3E-09 1.1E-13 127.0 5.3 56 931-988 164-219 (382)
91 3axb_A Putative oxidoreductase 98.8 6.5E-09 2.2E-13 127.3 7.7 58 930-988 180-254 (448)
92 2oln_A NIKD protein; flavoprot 98.7 6.5E-08 2.2E-12 116.3 15.9 55 931-987 153-207 (397)
93 2gf3_A MSOX, monomeric sarcosi 98.7 4.7E-08 1.6E-12 117.2 13.3 56 931-988 150-205 (389)
94 1rp0_A ARA6, thiazole biosynth 98.7 5.8E-08 2E-12 110.7 13.1 41 710-750 38-79 (284)
95 3alj_A 2-methyl-3-hydroxypyrid 98.7 1.1E-07 3.8E-12 113.4 15.7 62 931-996 107-168 (379)
96 2vou_A 2,6-dihydroxypyridine h 98.7 1.1E-07 3.8E-12 114.2 15.7 60 933-995 101-160 (397)
97 3nix_A Flavoprotein/dehydrogen 98.7 9.1E-08 3.1E-12 116.0 14.2 66 931-996 106-174 (421)
98 3nlc_A Uncharacterized protein 98.7 2.9E-08 1E-12 122.4 9.7 58 931-988 220-277 (549)
99 2x3n_A Probable FAD-dependent 98.7 9.9E-08 3.4E-12 114.8 13.7 66 931-996 107-174 (399)
100 3i3l_A Alkylhalidase CMLS; fla 98.6 9.7E-08 3.3E-12 119.7 13.2 65 931-995 128-195 (591)
101 3c4a_A Probable tryptophan hyd 98.6 3.5E-07 1.2E-11 109.2 16.9 234 9-243 1-299 (381)
102 3lxd_A FAD-dependent pyridine 98.6 3.3E-07 1.1E-11 110.7 16.1 57 930-986 193-249 (415)
103 2rgh_A Alpha-glycerophosphate 98.6 1.1E-07 3.9E-12 119.2 11.8 59 930-988 187-250 (571)
104 2qa1_A PGAE, polyketide oxygen 98.6 3.1E-07 1.1E-11 113.3 15.4 65 931-996 106-173 (500)
105 3jsk_A Cypbp37 protein; octame 98.6 2.5E-07 8.5E-12 106.2 13.0 41 710-750 78-120 (344)
106 1d4d_A Flavocytochrome C fumar 98.6 5.8E-07 2E-11 112.9 17.4 59 930-988 254-317 (572)
107 2qa2_A CABE, polyketide oxygen 98.6 3.7E-07 1.3E-11 112.7 15.2 65 931-996 107-174 (499)
108 3e1t_A Halogenase; flavoprotei 98.6 3E-07 1E-11 114.2 14.4 105 137-242 218-332 (512)
109 3itj_A Thioredoxin reductase 1 98.5 2E-07 6.7E-12 109.2 10.5 45 708-752 19-67 (338)
110 2xdo_A TETX2 protein; tetracyc 98.5 1.3E-07 4.3E-12 113.8 8.5 60 932-994 129-188 (398)
111 2qcu_A Aerobic glycerol-3-phos 98.5 9E-07 3.1E-11 109.5 16.1 58 930-988 148-210 (501)
112 3gwf_A Cyclohexanone monooxyge 98.5 2.2E-07 7.5E-12 115.5 10.5 57 931-987 87-146 (540)
113 4a9w_A Monooxygenase; baeyer-v 98.5 1.3E-07 4.4E-12 111.6 8.0 57 931-988 76-132 (357)
114 1k0i_A P-hydroxybenzoate hydro 98.5 2.2E-07 7.5E-12 111.5 10.1 65 931-995 103-170 (394)
115 4ap3_A Steroid monooxygenase; 98.5 2.4E-07 8.2E-12 115.4 10.6 56 932-987 100-158 (549)
116 2wdq_A Succinate dehydrogenase 98.5 1.3E-06 4.4E-11 109.8 17.2 58 931-988 143-206 (588)
117 3fg2_P Putative rubredoxin red 98.5 1.3E-06 4.3E-11 105.2 16.3 57 930-986 183-239 (404)
118 2cul_A Glucose-inhibited divis 98.5 6E-07 2E-11 98.9 12.2 55 931-986 68-123 (232)
119 3uox_A Otemo; baeyer-villiger 98.5 1.7E-07 5.9E-12 116.6 8.5 42 709-750 7-48 (545)
120 2gjc_A Thiazole biosynthetic e 98.4 6.8E-07 2.3E-11 102.1 12.3 41 710-750 64-106 (326)
121 2gmh_A Electron transfer flavo 98.4 1.8E-06 6.2E-11 108.5 17.4 62 931-992 144-221 (584)
122 3c96_A Flavin-containing monoo 98.4 9.1E-07 3.1E-11 106.7 14.1 64 931-996 107-177 (410)
123 1ryi_A Glycine oxidase; flavop 98.4 4.7E-06 1.6E-10 99.4 19.4 184 440-642 159-361 (382)
124 4fk1_A Putative thioredoxin re 98.4 4.7E-07 1.6E-11 104.4 10.3 51 933-984 182-232 (304)
125 1trb_A Thioredoxin reductase; 98.4 1.1E-06 3.9E-11 101.9 13.6 56 931-986 184-245 (320)
126 3iwa_A FAD-dependent pyridine 98.4 1.5E-06 5E-11 106.9 15.1 57 930-987 201-257 (472)
127 2bs2_A Quinol-fumarate reducta 98.4 2.1E-06 7.2E-11 108.7 16.7 58 931-988 158-220 (660)
128 4dna_A Probable glutathione re 98.4 4.3E-07 1.5E-11 111.3 9.7 57 930-987 210-267 (463)
129 3f8d_A Thioredoxin reductase ( 98.4 8E-07 2.7E-11 103.2 11.2 52 934-987 73-124 (323)
130 3o0h_A Glutathione reductase; 98.4 2.5E-06 8.4E-11 105.2 15.8 55 931-986 232-286 (484)
131 2zbw_A Thioredoxin reductase; 98.4 6.6E-07 2.3E-11 104.7 10.2 52 934-986 68-119 (335)
132 1w4x_A Phenylacetone monooxyge 98.4 7.8E-07 2.7E-11 111.2 11.3 42 709-750 14-55 (542)
133 2h88_A Succinate dehydrogenase 98.4 2.8E-06 9.6E-11 106.7 15.8 58 931-988 155-217 (621)
134 4hb9_A Similarities with proba 98.4 1.2E-06 4.2E-11 105.5 12.3 52 945-996 123-174 (412)
135 3ab1_A Ferredoxin--NADP reduct 98.3 6.5E-07 2.2E-11 105.9 9.3 54 933-986 76-129 (360)
136 3lzw_A Ferredoxin--NADP reduct 98.3 5.2E-07 1.8E-11 105.3 7.9 54 932-986 68-121 (332)
137 2zxi_A TRNA uridine 5-carboxym 98.3 2.3E-06 7.8E-11 105.7 13.7 56 931-987 123-179 (637)
138 1chu_A Protein (L-aspartate ox 98.3 2.8E-06 9.5E-11 105.7 14.2 58 931-988 138-208 (540)
139 3c4n_A Uncharacterized protein 98.3 1.8E-06 6E-11 103.9 11.8 57 930-988 171-236 (405)
140 2aqj_A Tryptophan halogenase, 98.3 2.2E-06 7.6E-11 107.1 13.1 58 931-989 165-223 (538)
141 3fmw_A Oxygenase; mithramycin, 98.3 6.8E-06 2.3E-10 102.8 17.1 228 7-241 48-357 (570)
142 3r9u_A Thioredoxin reductase; 98.3 1.5E-06 5E-11 100.6 9.6 48 939-986 191-242 (315)
143 3ces_A MNMG, tRNA uridine 5-ca 98.3 3E-06 1E-10 105.1 12.7 56 931-987 124-180 (651)
144 3fbs_A Oxidoreductase; structu 98.2 8.3E-07 2.8E-11 101.7 6.6 60 922-986 165-224 (297)
145 2qcu_A Aerobic glycerol-3-phos 98.2 1.4E-05 4.7E-10 98.9 17.8 195 440-641 144-370 (501)
146 2bry_A NEDD9 interacting prote 98.2 2.6E-06 8.8E-11 105.1 10.8 59 931-989 166-231 (497)
147 1kf6_A Fumarate reductase flav 98.2 9.7E-06 3.3E-10 102.0 16.1 59 931-989 134-198 (602)
148 1fec_A Trypanothione reductase 98.2 2.9E-06 1E-10 104.5 11.2 57 931-987 231-287 (490)
149 1xdi_A RV3303C-LPDA; reductase 98.2 4.4E-06 1.5E-10 103.3 12.8 56 931-987 223-278 (499)
150 2yqu_A 2-oxoglutarate dehydrog 98.2 6.7E-06 2.3E-10 100.5 14.2 57 930-987 207-263 (455)
151 3ics_A Coenzyme A-disulfide re 98.2 4.3E-06 1.5E-10 105.8 12.7 55 930-987 227-281 (588)
152 2e5v_A L-aspartate oxidase; ar 98.2 8.6E-06 3E-10 99.6 14.9 58 931-989 119-177 (472)
153 1jnr_A Adenylylsulfate reducta 98.2 1E-05 3.4E-10 102.9 15.8 57 932-988 152-218 (643)
154 3oc4_A Oxidoreductase, pyridin 98.2 4.6E-06 1.6E-10 101.8 12.0 55 930-986 188-242 (452)
155 1ges_A Glutathione reductase; 98.2 8E-06 2.7E-10 99.5 14.0 56 931-986 208-263 (450)
156 3d1c_A Flavin-containing putat 98.2 4.7E-06 1.6E-10 98.8 11.5 55 931-987 88-142 (369)
157 2hqm_A GR, grase, glutathione 98.2 8.2E-06 2.8E-10 100.3 13.9 56 931-986 226-283 (479)
158 2q0l_A TRXR, thioredoxin reduc 98.2 5.2E-06 1.8E-10 95.9 11.3 50 936-987 64-113 (311)
159 2ywl_A Thioredoxin reductase r 98.1 7.1E-06 2.4E-10 86.3 11.0 53 933-988 58-110 (180)
160 1q1r_A Putidaredoxin reductase 98.1 8.8E-06 3E-10 98.5 13.2 57 931-987 191-249 (431)
161 2e4g_A Tryptophan halogenase; 98.1 2.5E-05 8.4E-10 97.7 17.6 58 931-989 194-253 (550)
162 2wpf_A Trypanothione reductase 98.1 3.9E-06 1.3E-10 103.5 10.1 57 931-987 235-291 (495)
163 3cp8_A TRNA uridine 5-carboxym 98.1 7.3E-06 2.5E-10 101.7 12.4 56 931-987 117-173 (641)
164 2gv8_A Monooxygenase; FMO, FAD 98.1 3.7E-06 1.3E-10 102.5 9.7 42 710-751 5-48 (447)
165 2v3a_A Rubredoxin reductase; a 98.1 9E-06 3.1E-10 97.0 12.7 57 930-987 186-242 (384)
166 2gag_B Heterotetrameric sarcos 98.1 6E-05 2.1E-09 90.4 20.0 185 440-642 169-374 (405)
167 2r0c_A REBC; flavin adenine di 98.1 6E-06 2E-10 103.2 11.1 61 932-996 139-204 (549)
168 3h8l_A NADH oxidase; membrane 98.1 7E-06 2.4E-10 98.9 11.2 51 931-986 218-268 (409)
169 2weu_A Tryptophan 5-halogenase 98.1 8.4E-06 2.9E-10 101.3 12.3 59 930-989 172-231 (511)
170 2r9z_A Glutathione amide reduc 98.1 1.5E-05 5E-10 97.5 14.2 56 931-987 207-263 (463)
171 2q7v_A Thioredoxin reductase; 98.1 7.3E-06 2.5E-10 95.3 10.6 40 710-750 7-46 (325)
172 2dkh_A 3-hydroxybenzoate hydro 98.1 7.3E-06 2.5E-10 104.3 11.5 66 931-996 141-219 (639)
173 3ps9_A TRNA 5-methylaminomethy 98.1 8.1E-05 2.8E-09 95.6 21.0 59 439-497 411-474 (676)
174 3fpz_A Thiazole biosynthetic e 98.1 1.1E-06 3.9E-11 102.2 2.9 42 710-751 64-107 (326)
175 3ef6_A Toluene 1,2-dioxygenase 98.0 7.3E-06 2.5E-10 98.6 9.6 56 931-987 185-240 (410)
176 3gyx_A Adenylylsulfate reducta 98.0 7.9E-06 2.7E-10 103.3 10.0 58 931-988 166-233 (662)
177 2pyx_A Tryptophan halogenase; 98.0 2.5E-05 8.7E-10 97.1 14.5 59 931-990 175-235 (526)
178 1y56_A Hypothetical protein PH 98.0 1E-05 3.4E-10 99.8 10.3 41 710-751 107-147 (493)
179 3pvc_A TRNA 5-methylaminomethy 98.0 0.00018 6E-09 92.5 21.5 59 439-497 406-470 (689)
180 2cdu_A NADPH oxidase; flavoenz 98.0 2.2E-06 7.4E-11 104.8 3.4 57 930-987 190-246 (452)
181 1fl2_A Alkyl hydroperoxide red 98.0 1.1E-05 3.9E-10 92.9 9.2 52 936-987 61-114 (310)
182 3nyc_A D-arginine dehydrogenas 98.0 0.00011 3.6E-09 87.4 17.7 185 439-642 148-357 (381)
183 3ntd_A FAD-dependent pyridine 98.0 1.5E-05 5.1E-10 100.4 10.8 55 931-986 192-265 (565)
184 3s5w_A L-ornithine 5-monooxyge 98.0 9.7E-06 3.3E-10 99.4 8.7 39 710-748 29-72 (463)
185 4b1b_A TRXR, thioredoxin reduc 97.9 1.6E-05 5.5E-10 98.2 9.5 57 929-986 261-317 (542)
186 3qvp_A Glucose oxidase; oxidor 97.9 7E-05 2.4E-09 93.1 14.9 64 941-1004 237-309 (583)
187 3h28_A Sulfide-quinone reducta 97.9 6.3E-06 2.2E-10 99.9 4.8 39 711-749 2-42 (430)
188 1y56_B Sarcosine oxidase; dehy 97.9 0.0003 1E-08 83.6 19.3 186 440-642 144-354 (382)
189 4gcm_A TRXR, thioredoxin reduc 97.9 6E-06 2.1E-10 95.4 4.2 40 710-750 5-44 (312)
190 2gf3_A MSOX, monomeric sarcosi 97.8 0.0002 7E-09 85.2 17.4 188 440-643 145-364 (389)
191 1hyu_A AHPF, alkyl hydroperoxi 97.8 5E-05 1.7E-09 94.1 11.4 52 936-987 272-325 (521)
192 3klj_A NAD(FAD)-dependent dehy 97.8 2.5E-05 8.6E-10 92.8 8.1 43 941-986 72-114 (385)
193 2oln_A NIKD protein; flavoprot 97.8 0.00098 3.3E-08 79.6 21.8 58 439-497 147-209 (397)
194 1pn0_A Phenol 2-monooxygenase; 97.7 5.1E-05 1.8E-09 96.7 10.3 37 710-746 7-48 (665)
195 1n4w_A CHOD, cholesterol oxida 97.7 0.00022 7.4E-09 88.0 15.2 61 934-994 224-294 (504)
196 3t37_A Probable dehydrogenase; 97.7 1.8E-05 6E-10 98.8 5.5 59 944-1002 224-285 (526)
197 2i0z_A NAD(FAD)-utilizing dehy 97.7 3.9E-06 1.3E-10 102.2 -1.0 54 444-497 133-192 (447)
198 4a5l_A Thioredoxin reductase; 97.7 1.6E-05 5.5E-10 91.8 4.1 35 711-745 4-38 (314)
199 3v76_A Flavoprotein; structura 97.7 2.5E-05 8.6E-10 93.6 5.8 56 441-497 128-188 (417)
200 3fim_B ARYL-alcohol oxidase; A 97.6 0.0002 6.9E-09 88.8 13.2 67 937-1003 214-291 (566)
201 2uzz_A N-methyl-L-tryptophan o 97.6 0.00044 1.5E-08 81.8 15.6 58 439-497 143-205 (372)
202 3da1_A Glycerol-3-phosphate de 97.6 0.00057 2E-08 85.3 17.0 190 440-637 165-385 (561)
203 3urh_A Dihydrolipoyl dehydroge 97.6 1.8E-05 6.3E-10 97.6 3.0 43 709-751 23-65 (491)
204 3dme_A Conserved exported prot 97.6 0.00015 5.1E-09 85.6 10.4 59 439-497 144-210 (369)
205 4eqs_A Coenzyme A disulfide re 97.6 0.00022 7.5E-09 86.3 12.0 51 931-986 188-238 (437)
206 3nlc_A Uncharacterized protein 97.6 5.2E-05 1.8E-09 93.5 6.0 56 442-497 217-278 (549)
207 1rp0_A ARA6, thiazole biosynth 97.5 1.9E-05 6.4E-10 89.8 1.8 35 312-346 40-75 (284)
208 1c0p_A D-amino acid oxidase; a 97.5 4.6E-05 1.6E-09 90.0 5.0 39 710-748 5-43 (363)
209 3ces_A MNMG, tRNA uridine 5-ca 97.5 0.00017 5.7E-09 89.6 9.6 142 311-497 28-182 (651)
210 3jsk_A Cypbp37 protein; octame 97.5 2.6E-05 8.7E-10 89.5 2.0 37 310-346 78-116 (344)
211 2jbv_A Choline oxidase; alcoho 97.5 0.00033 1.1E-08 87.1 12.2 52 943-994 221-279 (546)
212 3l8k_A Dihydrolipoyl dehydroge 97.5 3.6E-05 1.2E-09 94.2 3.1 41 711-751 4-44 (466)
213 4g6h_A Rotenone-insensitive NA 97.4 0.00026 9.1E-09 87.0 10.3 56 930-986 271-330 (502)
214 3kkj_A Amine oxidase, flavin-c 97.4 7.3E-05 2.5E-09 84.1 4.9 37 8-46 2-38 (336)
215 3qfa_A Thioredoxin reductase 1 97.4 6.4E-05 2.2E-09 93.2 4.6 35 710-744 31-65 (519)
216 3cty_A Thioredoxin reductase; 97.4 6.3E-05 2.1E-09 87.0 4.0 40 711-751 16-55 (319)
217 1mo9_A ORF3; nucleotide bindin 97.4 6.4E-05 2.2E-09 93.3 4.3 57 931-987 255-315 (523)
218 2vdc_G Glutamate synthase [NAD 97.4 6.3E-05 2.1E-09 91.3 4.1 42 710-751 121-162 (456)
219 2zxi_A TRNA uridine 5-carboxym 97.4 0.00023 7.8E-09 88.0 8.9 142 311-496 27-180 (637)
220 3ic9_A Dihydrolipoamide dehydr 97.4 5.9E-05 2E-09 92.9 3.5 54 931-986 215-272 (492)
221 3lad_A Dihydrolipoamide dehydr 97.4 6.4E-05 2.2E-09 92.3 3.6 41 710-750 2-42 (476)
222 2qae_A Lipoamide, dihydrolipoy 97.4 5.9E-05 2E-09 92.4 3.2 41 711-751 2-42 (468)
223 1vdc_A NTR, NADPH dependent th 97.4 7E-05 2.4E-09 87.2 3.5 42 709-750 6-51 (333)
224 1dxl_A Dihydrolipoamide dehydr 97.4 7.3E-05 2.5E-09 91.7 3.8 41 710-750 5-45 (470)
225 1zmd_A Dihydrolipoyl dehydroge 97.3 6.6E-05 2.3E-09 92.1 3.1 41 710-750 5-45 (474)
226 3g3e_A D-amino-acid oxidase; F 97.3 6.4E-05 2.2E-09 88.3 2.4 37 712-748 1-43 (351)
227 1v59_A Dihydrolipoamide dehydr 97.3 7.4E-05 2.5E-09 91.8 3.0 41 710-750 4-44 (478)
228 2a8x_A Dihydrolipoyl dehydroge 97.3 7.9E-05 2.7E-09 91.2 3.2 40 710-750 2-41 (464)
229 3dk9_A Grase, GR, glutathione 97.3 7.5E-05 2.6E-09 91.7 2.9 41 709-750 18-58 (478)
230 3dgz_A Thioredoxin reductase 2 97.3 0.0001 3.5E-09 90.7 4.1 41 710-750 5-53 (488)
231 3ab1_A Ferredoxin--NADP reduct 97.3 0.00033 1.1E-08 82.5 8.2 110 312-495 15-130 (360)
232 3dgh_A TRXR-1, thioredoxin red 97.3 0.00011 3.8E-09 90.3 4.2 56 931-986 227-287 (483)
233 3k30_A Histamine dehydrogenase 97.3 0.0001 3.6E-09 94.6 4.1 42 710-751 390-431 (690)
234 3fpz_A Thiazole biosynthetic e 97.3 7.3E-05 2.5E-09 86.8 2.3 40 7-46 64-103 (326)
235 3cp8_A TRNA uridine 5-carboxym 97.3 0.00039 1.3E-08 86.3 8.7 143 311-496 21-174 (641)
236 4gde_A UDP-galactopyranose mut 97.2 0.0002 6.7E-09 88.9 5.8 48 7-55 9-56 (513)
237 2eq6_A Pyruvate dehydrogenase 97.2 0.00011 3.6E-09 90.0 3.1 55 931-986 210-269 (464)
238 1ojt_A Surface protein; redox- 97.2 0.00011 3.8E-09 90.2 3.2 40 711-750 6-45 (482)
239 4a9w_A Monooxygenase; baeyer-v 97.2 0.00024 8.3E-09 83.3 6.0 122 312-495 4-131 (357)
240 2cul_A Glucose-inhibited divis 97.2 0.00039 1.3E-08 76.2 7.1 54 443-497 66-126 (232)
241 2a87_A TRXR, TR, thioredoxin r 97.2 0.00013 4.5E-09 84.9 3.5 41 709-750 12-52 (335)
242 1zk7_A HGII, reductase, mercur 97.2 0.00013 4.5E-09 89.2 3.5 55 931-987 216-270 (467)
243 3ihm_A Styrene monooxygenase A 97.2 0.00013 4.4E-09 88.2 3.4 34 711-744 22-55 (430)
244 2ywl_A Thioredoxin reductase r 97.2 0.0003 1E-08 73.6 5.6 102 313-495 3-109 (180)
245 3axb_A Putative oxidoreductase 97.2 0.0026 9E-08 77.2 14.8 185 440-642 176-417 (448)
246 3c4n_A Uncharacterized protein 97.2 0.00071 2.4E-08 81.0 9.5 57 439-496 166-236 (405)
247 1o94_A Tmadh, trimethylamine d 97.2 0.0002 7E-09 92.3 5.0 42 710-751 388-429 (729)
248 3g5s_A Methylenetetrahydrofola 97.2 0.0002 6.8E-09 82.3 4.2 39 711-749 1-39 (443)
249 1w4x_A Phenylacetone monooxyge 97.2 0.00034 1.2E-08 87.2 6.9 130 311-496 16-154 (542)
250 1lvl_A Dihydrolipoamide dehydr 97.2 0.00012 4E-09 89.4 2.4 41 710-751 4-44 (458)
251 2gqf_A Hypothetical protein HI 97.1 0.00036 1.2E-08 83.2 6.5 54 443-497 107-169 (401)
252 2xve_A Flavin-containing monoo 97.1 0.0002 6.8E-09 87.4 4.1 40 712-751 3-48 (464)
253 4b63_A L-ornithine N5 monooxyg 97.1 0.00019 6.5E-09 88.4 3.9 41 710-750 38-78 (501)
254 2zbw_A Thioredoxin reductase; 97.1 0.00058 2E-08 79.4 7.7 110 312-495 6-120 (335)
255 3pl8_A Pyranose 2-oxidase; sub 97.1 0.00024 8.3E-09 89.6 4.7 41 710-750 45-85 (623)
256 1ebd_A E3BD, dihydrolipoamide 97.1 0.00017 5.7E-09 88.0 2.9 39 711-750 3-41 (455)
257 2q0l_A TRXR, thioredoxin reduc 97.1 0.00035 1.2E-08 80.3 5.3 54 441-495 55-113 (311)
258 4a5l_A Thioredoxin reductase; 97.1 0.00025 8.7E-09 81.6 4.0 37 5-43 1-37 (314)
259 2bcg_G Secretory pathway GDP d 97.0 0.00042 1.4E-08 84.3 5.5 46 5-52 8-53 (453)
260 1lqt_A FPRA; NADP+ derivative, 97.0 0.00023 7.7E-09 86.5 3.1 43 709-751 1-50 (456)
261 3itj_A Thioredoxin reductase 1 97.0 0.00028 9.7E-09 82.0 3.9 128 295-495 6-141 (338)
262 2eq6_A Pyruvate dehydrogenase 97.0 0.003 1E-07 77.0 13.1 35 712-746 170-204 (464)
263 1onf_A GR, grase, glutathione 97.0 0.00022 7.6E-09 88.0 3.0 56 931-986 217-273 (500)
264 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.00039 1.3E-08 89.0 4.9 42 710-751 372-413 (671)
265 3kd9_A Coenzyme A disulfide re 97.0 0.00033 1.1E-08 85.2 4.0 54 931-987 190-243 (449)
266 3gwf_A Cyclohexanone monooxyge 96.9 0.0013 4.4E-08 81.6 9.1 129 311-496 8-147 (540)
267 1vdc_A NTR, NADPH dependent th 96.9 0.00034 1.2E-08 81.3 3.6 52 442-495 67-123 (333)
268 1v0j_A UDP-galactopyranose mut 96.9 0.00062 2.1E-08 81.2 5.4 48 5-53 4-51 (399)
269 4gcm_A TRXR, thioredoxin reduc 96.9 0.00054 1.8E-08 78.8 4.7 35 7-43 5-39 (312)
270 3t37_A Probable dehydrogenase; 96.9 0.00046 1.6E-08 85.8 4.3 39 6-45 15-53 (526)
271 2gag_A Heterotetrameric sarcos 96.9 0.00042 1.4E-08 92.1 3.9 42 710-751 127-168 (965)
272 1nhp_A NADH peroxidase; oxidor 96.9 0.0034 1.2E-07 76.2 11.6 49 937-987 197-245 (447)
273 2gv8_A Monooxygenase; FMO, FAD 96.9 0.00097 3.3E-08 81.0 6.8 56 441-496 111-177 (447)
274 1v59_A Dihydrolipoamide dehydr 96.8 0.0038 1.3E-07 76.5 12.1 34 712-745 184-217 (478)
275 1gte_A Dihydropyrimidine dehyd 96.8 0.00052 1.8E-08 91.8 4.3 41 710-750 186-227 (1025)
276 1cjc_A Protein (adrenodoxin re 96.8 0.0005 1.7E-08 83.6 3.7 42 710-751 5-48 (460)
277 2q7v_A Thioredoxin reductase; 96.8 0.0011 3.8E-08 76.7 6.4 107 311-495 8-122 (325)
278 3fbs_A Oxidoreductase; structu 96.8 0.001 3.6E-08 75.6 6.1 104 312-495 3-111 (297)
279 2gjc_A Thiazole biosynthetic e 96.8 0.00076 2.6E-08 76.9 4.5 44 7-50 64-107 (326)
280 3uox_A Otemo; baeyer-villiger 96.8 0.00053 1.8E-08 85.1 3.4 128 311-495 9-146 (545)
281 3lzw_A Ferredoxin--NADP reduct 96.7 0.0018 6.2E-08 74.9 7.7 109 312-495 8-122 (332)
282 4fk1_A Putative thioredoxin re 96.7 0.0014 4.8E-08 75.0 6.7 34 311-344 6-39 (304)
283 1qo8_A Flavocytochrome C3 fuma 96.7 0.0014 4.8E-08 82.0 6.8 56 442-497 247-313 (566)
284 1onf_A GR, grase, glutathione 96.7 0.0062 2.1E-07 74.9 12.3 35 712-746 177-211 (500)
285 1ebd_A E3BD, dihydrolipoamide 96.7 0.0071 2.4E-07 73.5 12.6 49 938-987 218-269 (455)
286 2x8g_A Thioredoxin glutathione 96.7 0.00068 2.3E-08 85.7 3.5 34 710-743 106-139 (598)
287 3i6d_A Protoporphyrinogen oxid 96.7 0.00096 3.3E-08 81.6 4.7 45 8-52 5-53 (470)
288 3s5w_A L-ornithine 5-monooxyge 96.7 0.00042 1.4E-08 84.7 1.5 55 441-495 123-191 (463)
289 1rsg_A FMS1 protein; FAD bindi 96.6 0.0011 3.8E-08 82.1 5.2 48 6-54 6-53 (516)
290 1y0p_A Fumarate reductase flav 96.6 0.0019 6.6E-08 80.9 6.9 55 443-497 253-318 (571)
291 2a87_A TRXR, TR, thioredoxin r 96.6 0.0015 5.1E-08 76.0 5.5 106 312-495 15-125 (335)
292 3dje_A Fructosyl amine: oxygen 96.6 0.0013 4.5E-08 79.6 5.1 58 440-497 156-222 (438)
293 3qvp_A Glucose oxidase; oxidor 96.5 0.0013 4.5E-08 81.7 4.8 36 7-43 18-53 (583)
294 3f8d_A Thioredoxin reductase ( 96.5 0.0021 7.3E-08 73.9 6.4 105 311-495 15-124 (323)
295 4ap3_A Steroid monooxygenase; 96.5 0.0025 8.7E-08 79.0 7.3 128 311-495 21-158 (549)
296 3k7m_X 6-hydroxy-L-nicotine ox 96.5 0.0016 5.5E-08 78.6 5.4 42 9-52 2-43 (431)
297 1ju2_A HydroxynitrIle lyase; f 96.5 0.0009 3.1E-08 83.0 3.0 58 939-996 202-269 (536)
298 1hyu_A AHPF, alkyl hydroperoxi 96.5 0.0033 1.1E-07 77.7 8.0 123 294-495 186-325 (521)
299 2b9w_A Putative aminooxidase; 96.5 0.0017 5.9E-08 78.1 5.3 46 6-52 4-49 (424)
300 1kdg_A CDH, cellobiose dehydro 96.5 0.0012 4.1E-08 82.3 4.0 73 935-1007 199-280 (546)
301 3lov_A Protoporphyrinogen oxid 96.5 0.0022 7.4E-08 78.6 6.2 45 8-52 4-48 (475)
302 1fl2_A Alkyl hydroperoxide red 96.5 0.005 1.7E-07 70.5 8.9 54 442-495 53-114 (310)
303 1s3e_A Amine oxidase [flavin-c 96.5 0.0019 6.6E-08 80.1 5.7 46 7-54 3-48 (520)
304 3cgb_A Pyridine nucleotide-dis 96.5 0.0012 4.1E-08 80.9 3.8 55 931-987 227-281 (480)
305 1c0p_A D-amino acid oxidase; a 96.5 0.0018 6.3E-08 76.1 5.2 183 440-640 137-354 (363)
306 2bc0_A NADH oxidase; flavoprot 96.5 0.0012 4.2E-08 81.0 3.8 55 931-987 236-290 (490)
307 3nks_A Protoporphyrinogen oxid 96.4 0.0024 8.1E-08 78.3 6.1 45 9-53 3-47 (477)
308 3q9t_A Choline dehydrogenase a 96.4 0.0019 6.4E-08 80.4 5.0 38 6-44 4-41 (577)
309 1zmd_A Dihydrolipoyl dehydroge 96.4 0.011 3.9E-07 72.1 11.9 36 311-346 6-41 (474)
310 2e1m_A L-glutamate oxidase; L- 96.4 0.0028 9.6E-08 74.1 6.1 46 6-53 42-88 (376)
311 3cty_A Thioredoxin reductase; 96.4 0.0027 9.4E-08 73.1 6.0 44 943-986 202-250 (319)
312 3hdq_A UDP-galactopyranose mut 96.4 0.0021 7.3E-08 75.8 5.0 45 6-52 27-71 (397)
313 2jae_A L-amino acid oxidase; o 96.4 0.0031 1.1E-07 77.5 6.8 46 6-53 9-54 (489)
314 1nhp_A NADH peroxidase; oxidor 96.4 0.0015 5E-08 79.4 3.7 36 712-747 1-38 (447)
315 1trb_A Thioredoxin reductase; 96.4 0.0026 9.1E-08 73.1 5.7 53 442-495 59-115 (320)
316 2gqw_A Ferredoxin reductase; f 96.3 0.0015 5.2E-08 78.2 3.6 52 931-987 187-238 (408)
317 1d5t_A Guanine nucleotide diss 96.3 0.003 1E-07 76.1 6.1 46 5-52 3-48 (433)
318 1m6i_A Programmed cell death p 96.3 0.0018 6.2E-08 79.5 4.0 56 931-987 226-281 (493)
319 2a8x_A Dihydrolipoyl dehydroge 96.3 0.017 5.9E-07 70.2 12.5 47 939-986 220-269 (464)
320 3sx6_A Sulfide-quinone reducta 96.3 0.002 7E-08 77.8 4.2 35 711-745 4-41 (437)
321 3fim_B ARYL-alcohol oxidase; A 96.3 0.0017 5.7E-08 80.6 3.4 37 8-45 2-38 (566)
322 3q9t_A Choline dehydrogenase a 96.3 0.0019 6.5E-08 80.3 3.8 61 943-1003 218-285 (577)
323 4dsg_A UDP-galactopyranose mut 96.2 0.0029 1E-07 77.4 5.5 46 5-51 6-51 (484)
324 3l8k_A Dihydrolipoyl dehydroge 96.2 0.0017 6E-08 79.2 3.3 37 7-45 3-39 (466)
325 3g3e_A D-amino-acid oxidase; F 96.2 0.0023 7.7E-08 74.9 4.1 35 9-43 1-39 (351)
326 3lxd_A FAD-dependent pyridine 96.2 0.0031 1.1E-07 75.7 5.3 40 6-45 7-46 (415)
327 1i8t_A UDP-galactopyranose mut 96.2 0.0032 1.1E-07 74.0 5.3 43 8-52 1-43 (367)
328 3ka7_A Oxidoreductase; structu 96.2 0.0034 1.2E-07 75.5 5.7 43 9-53 1-43 (425)
329 3d1c_A Flavin-containing putat 96.2 0.0038 1.3E-07 73.4 5.9 54 441-495 84-142 (369)
330 1xhc_A NADH oxidase /nitrite r 96.2 0.0023 7.8E-08 75.4 3.8 50 931-986 183-232 (367)
331 2yg5_A Putrescine oxidase; oxi 96.2 0.0029 9.9E-08 76.9 4.9 44 7-52 4-47 (453)
332 3p1w_A Rabgdi protein; GDI RAB 96.2 0.0032 1.1E-07 75.8 5.1 51 445-495 256-313 (475)
333 2ivd_A PPO, PPOX, protoporphyr 96.2 0.0035 1.2E-07 76.7 5.6 45 7-53 15-59 (478)
334 4dgk_A Phytoene dehydrogenase; 96.1 0.0029 1E-07 78.0 4.6 42 9-52 2-43 (501)
335 1sez_A Protoporphyrinogen oxid 96.1 0.0044 1.5E-07 76.5 5.8 45 7-53 12-56 (504)
336 2v3a_A Rubredoxin reductase; a 96.0 0.0039 1.3E-07 73.9 5.0 37 7-43 3-39 (384)
337 3nrn_A Uncharacterized protein 96.0 0.0048 1.6E-07 74.2 5.6 51 445-495 189-242 (421)
338 2xve_A Flavin-containing monoo 96.0 0.0051 1.8E-07 74.8 5.8 56 441-496 97-166 (464)
339 3qj4_A Renalase; FAD/NAD(P)-bi 96.0 0.0043 1.5E-07 72.3 4.9 37 9-45 2-39 (342)
340 2vvm_A Monoamine oxidase N; FA 96.0 0.0047 1.6E-07 76.0 5.4 43 9-53 40-82 (495)
341 1chu_A Protein (L-aspartate ox 96.0 0.0045 1.5E-07 76.7 5.2 37 6-45 6-42 (540)
342 3qfa_A Thioredoxin reductase 1 96.0 0.0051 1.8E-07 76.0 5.7 38 5-44 29-66 (519)
343 1ju2_A HydroxynitrIle lyase; f 95.9 0.003 1E-07 78.3 3.5 36 7-45 25-60 (536)
344 1kf6_A Fumarate reductase flav 95.9 0.0034 1.2E-07 78.8 3.8 39 7-45 4-42 (602)
345 3urh_A Dihydrolipoyl dehydroge 95.9 0.0048 1.6E-07 75.8 4.8 37 7-45 24-60 (491)
346 1gpe_A Protein (glucose oxidas 95.8 0.0043 1.5E-07 77.6 4.3 62 941-1002 241-311 (587)
347 2bc0_A NADH oxidase; flavoprot 95.8 0.0048 1.6E-07 75.7 4.6 38 8-45 35-73 (490)
348 3gyx_A Adenylylsulfate reducta 95.8 0.005 1.7E-07 77.7 4.8 42 8-49 22-67 (662)
349 4at0_A 3-ketosteroid-delta4-5a 95.8 0.0042 1.4E-07 76.7 3.9 38 6-45 39-76 (510)
350 1mo9_A ORF3; nucleotide bindin 95.8 0.0066 2.2E-07 75.1 5.5 42 2-45 37-78 (523)
351 2wdq_A Succinate dehydrogenase 95.7 0.0041 1.4E-07 77.9 3.5 37 7-45 6-42 (588)
352 1q1r_A Putidaredoxin reductase 95.7 0.007 2.4E-07 72.9 5.4 37 8-44 4-40 (431)
353 3lad_A Dihydrolipoamide dehydr 95.7 0.0056 1.9E-07 74.9 4.4 37 7-45 2-38 (476)
354 1coy_A Cholesterol oxidase; ox 95.7 0.0053 1.8E-07 75.5 4.1 61 934-994 229-299 (507)
355 2gqw_A Ferredoxin reductase; f 95.7 0.0068 2.3E-07 72.4 4.9 39 6-44 5-43 (408)
356 1vg0_A RAB proteins geranylger 95.6 0.0089 3E-07 74.2 5.9 53 1-55 1-53 (650)
357 3vrd_B FCCB subunit, flavocyto 95.6 0.0052 1.8E-07 73.3 3.6 49 937-986 208-256 (401)
358 1ojt_A Surface protein; redox- 95.6 0.0064 2.2E-07 74.5 4.4 39 5-45 3-41 (482)
359 3o0h_A Glutathione reductase; 95.6 0.0072 2.5E-07 74.0 4.7 49 447-495 234-287 (484)
360 3oc4_A Oxidoreductase, pyridin 95.5 0.0082 2.8E-07 72.8 5.1 37 9-45 3-39 (452)
361 2r9z_A Glutathione amide reduc 95.5 0.0073 2.5E-07 73.5 4.5 34 7-42 3-36 (463)
362 2iid_A L-amino-acid oxidase; f 95.5 0.011 3.9E-07 72.6 6.3 46 6-53 31-76 (498)
363 1xdi_A RV3303C-LPDA; reductase 95.5 0.0072 2.5E-07 74.4 4.5 36 8-43 2-38 (499)
364 4dna_A Probable glutathione re 95.5 0.0076 2.6E-07 73.4 4.7 33 7-41 4-36 (463)
365 3ic9_A Dihydrolipoamide dehydr 95.5 0.0067 2.3E-07 74.4 4.2 34 8-43 8-41 (492)
366 1zk7_A HGII, reductase, mercur 95.5 0.0086 3E-07 73.0 5.0 37 6-45 2-38 (467)
367 2hqm_A GR, grase, glutathione 95.5 0.0072 2.5E-07 73.9 4.3 34 7-42 10-43 (479)
368 1m6i_A Programmed cell death p 95.5 0.0095 3.3E-07 73.0 5.4 41 5-45 8-48 (493)
369 2bi7_A UDP-galactopyranose mut 95.5 0.011 3.6E-07 70.0 5.6 43 8-52 3-45 (384)
370 2bs2_A Quinol-fumarate reducta 95.5 0.0062 2.1E-07 77.0 3.7 38 6-45 3-40 (660)
371 3dk9_A Grase, GR, glutathione 95.4 0.0074 2.5E-07 73.8 4.2 34 7-42 19-52 (478)
372 3kd9_A Coenzyme A disulfide re 95.4 0.01 3.5E-07 71.9 5.4 38 8-45 3-40 (449)
373 1ges_A Glutathione reductase; 95.4 0.0078 2.7E-07 73.0 4.3 49 447-495 210-264 (450)
374 1d4d_A Flavocytochrome C fumar 95.4 0.015 5.1E-07 72.7 7.0 55 443-497 253-318 (572)
375 2cdu_A NADPH oxidase; flavoenz 95.3 0.01 3.4E-07 72.1 4.8 37 9-45 1-37 (452)
376 3iwa_A FAD-dependent pyridine 95.3 0.0087 3E-07 73.1 4.3 38 8-45 3-40 (472)
377 1kdg_A CDH, cellobiose dehydro 95.3 0.0097 3.3E-07 74.1 4.7 38 6-45 5-42 (546)
378 1dxl_A Dihydrolipoamide dehydr 95.3 0.011 3.7E-07 72.2 5.0 38 6-45 4-41 (470)
379 3hyw_A Sulfide-quinone reducta 95.2 0.0082 2.8E-07 72.3 3.6 54 930-986 199-254 (430)
380 3dgz_A Thioredoxin reductase 2 95.2 0.0094 3.2E-07 73.1 4.2 35 7-43 5-39 (488)
381 4b1b_A TRXR, thioredoxin reduc 95.2 0.01 3.5E-07 73.1 4.5 35 8-44 42-76 (542)
382 2h88_A Succinate dehydrogenase 95.2 0.0096 3.3E-07 74.7 4.1 37 7-45 17-53 (621)
383 3dgh_A TRXR-1, thioredoxin red 95.1 0.012 4.2E-07 71.9 4.8 34 7-42 8-41 (483)
384 2wpf_A Trypanothione reductase 95.1 0.011 3.8E-07 72.5 4.1 48 448-495 238-291 (495)
385 3pl8_A Pyranose 2-oxidase; sub 95.0 0.013 4.5E-07 73.7 4.7 38 6-45 44-81 (623)
386 3g5s_A Methylenetetrahydrofola 95.0 0.016 5.5E-07 66.7 4.9 35 9-45 2-36 (443)
387 2yqu_A 2-oxoglutarate dehydrog 95.0 0.013 4.6E-07 71.0 4.7 36 8-45 1-36 (455)
388 2qae_A Lipoamide, dihydrolipoy 95.0 0.014 4.8E-07 71.1 4.8 36 8-45 2-37 (468)
389 2rgh_A Alpha-glycerophosphate 95.0 0.014 4.8E-07 72.8 4.8 151 442-598 185-365 (571)
390 1b37_A Protein (polyamine oxid 95.0 0.017 5.9E-07 70.4 5.4 44 7-52 3-47 (472)
391 3cgb_A Pyridine nucleotide-dis 94.9 0.016 5.4E-07 70.9 5.0 38 8-45 36-73 (480)
392 3h28_A Sulfide-quinone reducta 94.9 0.016 5.6E-07 69.7 5.0 36 9-44 3-38 (430)
393 3r9u_A Thioredoxin reductase; 94.9 0.026 8.7E-07 64.5 6.3 31 312-342 5-36 (315)
394 3ics_A Coenzyme A-disulfide re 94.8 0.019 6.3E-07 72.3 5.4 38 8-45 36-73 (588)
395 1lvl_A Dihydrolipoamide dehydr 94.8 0.016 5.5E-07 70.3 4.6 33 7-41 4-36 (458)
396 3vrd_B FCCB subunit, flavocyto 94.8 0.018 6.1E-07 68.6 4.9 35 10-44 4-38 (401)
397 3fg2_P Putative rubredoxin red 94.8 0.021 7.2E-07 68.1 5.5 37 9-45 2-38 (404)
398 4gut_A Lysine-specific histone 94.8 0.022 7.4E-07 73.3 5.8 45 8-54 336-380 (776)
399 2e1m_C L-glutamate oxidase; L- 94.8 0.0016 5.5E-08 67.9 -3.8 90 1100-1198 56-149 (181)
400 2jbv_A Choline oxidase; alcoho 94.8 0.019 6.5E-07 71.2 5.1 38 7-45 12-49 (546)
401 1pj5_A N,N-dimethylglycine oxi 94.7 0.016 5.6E-07 75.9 4.7 57 440-497 146-208 (830)
402 1jnr_A Adenylylsulfate reducta 94.7 0.018 6.1E-07 72.9 4.8 36 8-45 22-61 (643)
403 3ef6_A Toluene 1,2-dioxygenase 94.7 0.025 8.4E-07 67.6 5.6 37 9-45 3-39 (410)
404 1coy_A Cholesterol oxidase; ox 94.7 0.023 7.9E-07 69.8 5.4 38 5-44 8-45 (507)
405 2e5v_A L-aspartate oxidase; ar 94.6 0.017 5.9E-07 70.3 4.2 31 10-42 1-31 (472)
406 3ntd_A FAD-dependent pyridine 94.6 0.022 7.4E-07 71.3 5.2 37 9-45 2-38 (565)
407 1cjc_A Protein (adrenodoxin re 94.6 0.023 8E-07 68.8 5.2 39 7-45 5-43 (460)
408 3sx6_A Sulfide-quinone reducta 94.6 0.016 5.5E-07 69.9 3.7 36 8-43 4-40 (437)
409 2vdc_G Glutamate synthase [NAD 94.5 0.029 9.9E-07 67.8 5.7 37 7-45 121-157 (456)
410 1gpe_A Protein (glucose oxidas 94.4 0.024 8.3E-07 70.8 5.0 38 7-45 23-60 (587)
411 2x8g_A Thioredoxin glutathione 94.4 0.026 8.9E-07 71.1 5.2 35 6-42 105-139 (598)
412 1fec_A Trypanothione reductase 94.4 0.022 7.7E-07 69.7 4.5 49 447-495 233-287 (490)
413 3h8l_A NADH oxidase; membrane 94.3 0.021 7.3E-07 68.1 3.9 50 446-495 219-269 (409)
414 3hyw_A Sulfide-quinone reducta 94.2 0.029 9.9E-07 67.4 4.8 34 10-43 4-37 (430)
415 1y56_A Hypothetical protein PH 94.1 0.018 6E-07 70.6 2.7 36 7-45 107-142 (493)
416 1n4w_A CHOD, cholesterol oxida 94.0 0.031 1.1E-06 68.6 4.7 37 7-45 4-40 (504)
417 2z3y_A Lysine-specific histone 94.0 0.045 1.5E-06 69.6 6.2 44 7-52 106-149 (662)
418 3k30_A Histamine dehydrogenase 93.9 0.039 1.3E-06 70.6 5.5 37 7-45 390-426 (690)
419 1xhc_A NADH oxidase /nitrite r 93.9 0.036 1.2E-06 65.1 4.6 87 314-495 146-233 (367)
420 1lqt_A FPRA; NADP+ derivative, 93.8 0.026 8.8E-07 68.3 3.4 38 8-45 3-45 (456)
421 2e1m_B L-glutamate oxidase; L- 93.8 0.048 1.6E-06 52.7 4.6 53 973-1027 4-56 (130)
422 4eqs_A Coenzyme A disulfide re 93.6 0.037 1.3E-06 66.6 4.2 46 450-495 193-239 (437)
423 2xag_A Lysine-specific histone 93.5 0.062 2.1E-06 69.6 6.2 44 7-52 277-320 (852)
424 4b63_A L-ornithine N5 monooxyg 93.5 0.056 1.9E-06 66.2 5.6 35 7-43 38-72 (501)
425 1o94_A Tmadh, trimethylamine d 93.0 0.067 2.3E-06 68.8 5.3 37 7-45 388-424 (729)
426 2gag_A Heterotetrameric sarcos 92.9 0.044 1.5E-06 72.7 3.5 37 8-46 128-164 (965)
427 1ps9_A 2,4-dienoyl-COA reducta 92.8 0.079 2.7E-06 67.5 5.6 36 8-45 373-408 (671)
428 3klj_A NAD(FAD)-dependent dehy 92.5 0.093 3.2E-06 61.9 5.3 39 5-45 6-44 (385)
429 3aqb_B Component B of hexapren 92.4 5.5 0.00019 45.2 19.7 133 1282-1414 139-308 (325)
430 1gte_A Dihydropyrimidine dehyd 92.0 0.097 3.3E-06 69.9 5.2 38 7-45 186-223 (1025)
431 3ayj_A Pro-enzyme of L-phenyla 92.0 0.087 3E-06 66.3 4.4 38 8-45 56-100 (721)
432 4f62_A Geranyltranstransferase 91.4 1 3.5E-05 50.8 11.8 118 1284-1413 152-279 (317)
433 3mzv_A Decaprenyl diphosphate 91.3 1.5 5.1E-05 50.1 13.3 132 1282-1413 148-315 (341)
434 3ts7_A Geranyltranstransferase 91.1 1.3 4.5E-05 50.0 12.4 110 1283-1414 158-287 (324)
435 3rmg_A Octaprenyl-diphosphate 91.1 1.6 5.6E-05 49.7 13.3 134 1281-1414 141-309 (334)
436 1uby_A FPS, farnesyl diphospha 90.9 4.6 0.00016 46.6 17.1 136 1283-1419 179-356 (367)
437 2her_A Fragment, farnesyl pyro 90.9 2.4 8.1E-05 48.8 14.4 145 1282-1428 177-355 (368)
438 2ihi_A Pyrophosphate synthase; 90.7 11 0.00036 43.9 19.9 131 1282-1413 187-378 (395)
439 1wmw_A Geranylgeranyl diphosph 90.7 6.1 0.00021 44.9 17.7 131 1282-1413 139-312 (330)
440 3p8r_A Geranyltranstransferase 90.6 1.5 5.2E-05 49.1 12.2 119 1284-1414 159-287 (302)
441 4g6h_A Rotenone-insensitive NA 90.5 0.17 5.9E-06 61.8 4.9 35 7-43 41-75 (502)
442 3oyr_A Trans-isoprenyl diphosp 90.5 2.3 8E-05 48.5 13.9 132 1282-1413 160-327 (345)
443 2qis_A Farnesyl pyrophosphate 90.4 6.5 0.00022 45.4 17.8 131 1283-1414 186-357 (374)
444 1lss_A TRK system potassium up 90.4 0.17 5.9E-06 49.6 3.9 33 712-744 5-37 (140)
445 3lsn_A Geranyltranstransferase 90.3 1.7 6E-05 48.6 12.4 118 1284-1413 153-280 (304)
446 2q80_A Geranylgeranyl pyrophos 90.2 3.4 0.00011 46.3 14.7 134 1281-1414 119-283 (301)
447 1yhl_A Farnesyl pyrophosphate 90.2 8 0.00027 44.6 18.3 132 1282-1414 160-343 (362)
448 3uca_A Geranyltranstransferase 90.1 1.6 5.4E-05 49.3 11.8 110 1283-1414 180-309 (324)
449 3tc1_A Octaprenyl pyrophosphat 90.0 1.8 6.1E-05 48.9 12.2 133 1281-1414 130-294 (315)
450 3lk7_A UDP-N-acetylmuramoylala 89.9 0.22 7.5E-06 60.0 5.0 35 710-744 8-42 (451)
451 3m0g_A Farnesyl diphosphate sy 89.9 0.65 2.2E-05 51.9 8.5 110 1283-1414 147-274 (297)
452 3lom_A Geranyltranstransferase 89.8 1.4 4.6E-05 49.7 11.0 109 1284-1414 159-288 (313)
453 3kb9_A EPI-isozizaene synthase 89.6 6.3 0.00022 45.9 17.1 186 1203-1407 104-315 (382)
454 2g1u_A Hypothetical protein TM 89.5 0.22 7.5E-06 50.1 3.9 34 711-744 19-52 (155)
455 3ic5_A Putative saccharopine d 89.4 0.22 7.4E-06 47.1 3.6 34 711-744 5-39 (118)
456 3lmd_A Geranylgeranyl pyrophos 89.4 1.7 6E-05 49.8 11.7 132 1281-1413 168-334 (360)
457 3lk5_A Geranylgeranyl pyrophos 89.4 4.8 0.00016 46.6 15.5 138 1283-1420 185-363 (380)
458 3llv_A Exopolyphosphatase-rela 89.3 0.21 7.2E-06 49.3 3.6 34 711-744 6-39 (141)
459 1id1_A Putative potassium chan 89.3 0.23 7.9E-06 49.8 3.9 34 710-743 2-35 (153)
460 4dhd_A Polyprenyl synthetase; 89.1 2 7E-05 49.3 12.1 132 1282-1414 141-322 (358)
461 3nf2_A Putative polyprenyl syn 89.1 2.1 7E-05 49.2 12.0 139 1280-1419 150-333 (352)
462 3pko_A Geranylgeranyl pyrophos 88.6 2.8 9.6E-05 47.7 12.7 131 1281-1413 151-316 (334)
463 1rtr_A Geranyltranstransferase 88.5 2.6 9.1E-05 47.2 12.2 118 1283-1412 148-274 (301)
464 3fwz_A Inner membrane protein 88.4 0.31 1.1E-05 48.1 4.0 34 711-744 7-40 (140)
465 1v4e_A Octoprenyl-diphosphate 87.5 2.3 7.9E-05 47.6 10.9 132 1282-1413 136-288 (299)
466 2e8v_A Geranylgeranyl pyrophos 87.2 3.3 0.00011 47.3 12.2 133 1281-1413 139-319 (340)
467 3apz_A Geranyl diphosphate syn 87.1 3.4 0.00012 47.4 12.3 132 1282-1413 162-324 (348)
468 1f0y_A HCDH, L-3-hydroxyacyl-C 86.2 0.46 1.6E-05 53.8 4.3 33 711-743 15-47 (302)
469 4e12_A Diketoreductase; oxidor 86.1 0.46 1.6E-05 53.2 4.2 33 711-743 4-36 (283)
470 3ado_A Lambda-crystallin; L-gu 86.1 0.41 1.4E-05 54.1 3.7 33 711-743 6-38 (319)
471 3p8l_A Geranyltranstransferase 85.3 2.8 9.6E-05 46.9 10.0 116 1284-1411 157-281 (302)
472 2dpo_A L-gulonate 3-dehydrogen 85.3 0.47 1.6E-05 54.0 3.7 34 710-743 5-38 (319)
473 2x5o_A UDP-N-acetylmuramoylala 85.2 0.36 1.2E-05 57.9 2.9 38 711-748 5-42 (439)
474 2hmt_A YUAA protein; RCK, KTN, 84.9 0.44 1.5E-05 46.8 3.0 33 711-743 6-38 (144)
475 3ipi_A Geranyltranstransferase 84.6 8.1 0.00028 43.0 13.3 118 1282-1413 136-266 (295)
476 3c85_A Putative glutathione-re 84.4 0.52 1.8E-05 48.8 3.4 34 711-744 39-73 (183)
477 3k96_A Glycerol-3-phosphate de 84.4 0.52 1.8E-05 54.5 3.7 37 707-743 25-61 (356)
478 3k6j_A Protein F01G10.3, confi 83.9 0.73 2.5E-05 54.8 4.7 37 708-744 51-87 (460)
479 2h8o_A Geranyltranstransferase 83.9 3.6 0.00012 46.7 10.2 108 1283-1412 192-318 (335)
480 1wy0_A Geranylgeranyl pyrophos 83.7 4.7 0.00016 46.1 11.2 131 1282-1413 146-324 (342)
481 3eag_A UDP-N-acetylmuramate:L- 83.0 0.86 2.9E-05 52.1 4.7 35 711-745 4-39 (326)
482 4huj_A Uncharacterized protein 82.9 0.5 1.7E-05 50.7 2.5 39 705-743 17-56 (220)
483 1ps1_A Pentalenene synthase; a 82.6 35 0.0012 38.6 18.4 183 1205-1407 66-273 (337)
484 3ghy_A Ketopantoate reductase 82.5 0.69 2.3E-05 53.2 3.7 33 711-743 3-35 (335)
485 2ew2_A 2-dehydropantoate 2-red 82.5 0.74 2.5E-05 52.2 3.9 33 711-743 3-35 (316)
486 2ftz_A Geranyltranstransferase 82.4 7.3 0.00025 43.1 11.7 116 1283-1412 144-267 (284)
487 4dll_A 2-hydroxy-3-oxopropiona 82.3 0.93 3.2E-05 51.7 4.7 34 710-743 30-63 (320)
488 1pzg_A LDH, lactate dehydrogen 82.3 0.81 2.8E-05 52.3 4.1 34 711-744 9-43 (331)
489 3l4b_C TRKA K+ channel protien 81.9 0.63 2.1E-05 49.8 2.8 32 713-744 2-33 (218)
490 3g79_A NDP-N-acetyl-D-galactos 81.7 1.1 3.6E-05 53.9 4.9 35 711-745 18-54 (478)
491 3i83_A 2-dehydropantoate 2-red 81.6 0.89 3E-05 51.9 4.1 33 712-744 3-35 (320)
492 3hn2_A 2-dehydropantoate 2-red 81.3 0.92 3.2E-05 51.5 4.1 32 712-743 3-34 (312)
493 4dio_A NAD(P) transhydrogenase 80.9 1 3.4E-05 52.5 4.2 35 710-744 189-223 (405)
494 3tl2_A Malate dehydrogenase; c 80.8 1 3.5E-05 51.0 4.2 36 708-743 5-41 (315)
495 2raf_A Putative dinucleotide-b 80.7 1.1 3.8E-05 47.5 4.2 36 710-745 18-53 (209)
496 1lld_A L-lactate dehydrogenase 80.6 0.98 3.4E-05 51.4 4.1 34 711-744 7-42 (319)
497 3pde_A Farnesyl-diphosphate sy 80.6 8.4 0.00029 43.1 11.5 117 1283-1411 155-280 (309)
498 2y0c_A BCEC, UDP-glucose dehyd 80.5 0.95 3.3E-05 54.6 4.0 34 710-743 7-40 (478)
499 1kyq_A Met8P, siroheme biosynt 80.5 0.68 2.3E-05 51.1 2.5 35 710-744 12-46 (274)
500 1bg6_A N-(1-D-carboxylethyl)-L 80.5 0.97 3.3E-05 52.4 4.0 33 711-743 4-36 (359)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.3e-58 Score=580.22 Aligned_cols=488 Identities=54% Similarity=0.981 Sum_probs=364.7
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCCchHHHHHHHHhcccccccceE
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLFDLSKNRMENYVNL 790 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~~~~~~~l~~~lG~~l~~~l~~ 790 (1428)
|++|||||||++||+||++|+++|++|+||||++++||+++|++.+||.+|.|++++.++..+.++++.+|.++.+.+++
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~~~~~~~l~~~~g~~~~~~~~~ 80 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITDPSAIEELFALAGKQLKEYVEL 80 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSCTHHHHHHHHTTTCCGGGTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecCchhHHHHHHHhcchhhhceee
Confidence 57899999999999999999999999999999999999999999999999999999998888899999999888888899
Q ss_pred EecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHHhh
Q psy10545 791 LPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLIKI 870 (1428)
Q Consensus 791 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (1428)
.+.++.+.+.+.+|+.+.++.+...+.+.+.+++|.+.+.+.+|++.++.++......+...++.++.+++...+.+..+
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (501)
T 4dgk_A 81 LPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKL 160 (501)
T ss_dssp EEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTS
T ss_pred EecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999888877666666666777777776655544444
Q ss_pred cccCCHHHHHHhhcCCHHHHHHHHhhcccccCCCCchhHHHHHHHHhccccceeeecCchHHHHHHHHHHHHHcCcEEEe
Q psy10545 871 KAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFSTSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLIL 950 (1428)
Q Consensus 871 ~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~g~~p~~~s~~~~~~~~~~~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~ 950 (1428)
....++.+++.+++.++.++.++.....+.+..|...++.+.++.+.....|.++|+||++.|+++|++.++++|++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~ 240 (501)
T 4dgk_A 161 QAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGGEVVL 240 (501)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTHHHHHHHHHHHHHHHTTCEEEC
T ss_pred hhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCCCcchHHHHHHHHHHhCCceee
Confidence 44567889999999999999999877777788888777777777777777899999999999999999999999999999
Q ss_pred CceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCcCCC
Q psy10545 951 NSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHL 1030 (1428)
Q Consensus 951 ~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~ 1030 (1428)
|++|++|..+++++++|+++||+++.||.||++++++.+...|+++.+.+....+.+++.+++.+.++++++++.+.+.+
T Consensus 241 ~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l 320 (501)
T 4dgk_A 241 NARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQL 320 (501)
T ss_dssp SCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------------------CCEEEEEEEEESSCCTTS
T ss_pred ecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCceeEEEecccCCcccc
Confidence 99999999999999999999999999999999999999999899887777777788889999999999999999998889
Q ss_pred cceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCCCCcHHHHHHHHHHHHHH
Q psy10545 1031 AHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSSINWSEESIKLKNIVFMY 1110 (1428)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~ 1110 (1428)
.++++++.+++...++.++..+.+++++.++++.+|..||+++|+|++++++++++|.......+|+..++++.+++++.
T Consensus 321 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~ 400 (501)
T 4dgk_A 321 AHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAY 400 (501)
T ss_dssp CSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHHHHHHHHHHH
T ss_pred ccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHHHHHHHHHHH
Confidence 99999999998888888888888999999999999999999999999999999988776543567999999999999999
Q ss_pred HHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCceEEecCCccCCCCcccccccc
Q psy10545 1111 LEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGS 1190 (1428)
Q Consensus 1111 L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg 1190 (1428)
|++.++|+++++++..++.||.+|+++++.+.|++||..+...|...+||..++++++|||+||++|+||+||+||+.||
T Consensus 401 l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG 480 (501)
T 4dgk_A 401 LEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPGAGIPGVIGSA 480 (501)
T ss_dssp HHHHTCTTHHHHEEEEEEECTTTTC------------------------------CCTTEEECCCH------HHHHHHHH
T ss_pred HHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCCcccHHHHHHHH
Confidence 99757799999999999999999999999999999999999999888999876545999999999999999999999999
Q ss_pred cccccccc
Q psy10545 1191 KSFSSAIK 1198 (1428)
Q Consensus 1191 ~~~a~~i~ 1198 (1428)
+.+|+.|.
T Consensus 481 ~~aA~~il 488 (501)
T 4dgk_A 481 KATAGLML 488 (501)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999885
No 2
>4hd1_A Squalene synthase HPNC; MCSG, structural genomics, PSI-biology, midwest center for S genomics, transferase; 2.40A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=8.6e-45 Score=413.57 Aligned_cols=228 Identities=21% Similarity=0.269 Sum_probs=216.5
Q ss_pred ccccccccccccchhhHHHHHHHHhhhhccccccccCccCcchhhhhhhhhHHHHHHHHHHHHHHHhcCCCCCcHHHHHH
Q psy10545 1189 GSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRACIGFKMKEPAFLAL 1268 (1428)
Q Consensus 1189 sg~~~a~~i~~l~~~~r~~~~~lYaf~r~~Ddi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~l 1268 (1428)
.++++...++++|+++|+++++||+|||.+|||+|+.. +. ...+|++|++.+..++.|.+ .||++.+|
T Consensus 25 ~~~sF~~a~~~lp~~~R~~~~alYaf~R~~Ddi~D~~~--~~---------~~~~L~~~~~~l~~~~~g~~-~~pv~~al 92 (294)
T 4hd1_A 25 HYENFSVVSLFVPRHLRPHFYSVYAFCRGVDDLGDEFA--GD---------RMAALDAYEEELRRAFAGEA-TTPAFRAL 92 (294)
T ss_dssp HCTTHHHHTTTCCTTTHHHHHHHHHHHHHHHHTSTTCC--SC---------HHHHHHHHHHHHHHHHHTCC-CSHHHHHH
T ss_pred hCCcHHHHHHHCCHHHHHHHHHHHHHHHHHHHhccCCC--hh---------HHHHHHHHHHHHHHHhcCCC-CCHHHHHH
Confidence 47788888999999999999999999999999999853 21 23589999999999998865 59999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhHHHHHHHHHhhCCCccchHHHHHHHHHHHHHHHHHh
Q psy10545 1269 QKIISIHSFPVHLLFEHLDGFEMDVMERTYITLDETLGYCYHVAGTIGLIIAHLIGVKEKDTLNCARNLGIAFQLTNISR 1348 (1428)
Q Consensus 1269 ~~~~~~~~l~~~~~~~li~~~~~dl~~~~~~t~~~l~~Y~~~vag~vg~~~~~~~~~~~~~~~~~a~~~g~a~q~~nilr 1348 (1428)
.+++++|+||.++|.+||+||++|+...+|+|++||+.|||+|||+||+|+++++|..+++..+.|+++|+|||+|||||
T Consensus 93 ~~~~~~~~l~~~~~~~li~g~~~Dl~~~~~~t~~dL~~Y~~~vAg~VG~m~~~i~g~~~~~~~~~A~~lG~AlQltNilR 172 (294)
T 4hd1_A 93 QFTIATCNLPMEPFLRLIEANRRDQRKHTYDTWEDLRDYCRYSADPVGRLVLGIFGCLDDERARLSDATCTALQVANHMQ 172 (294)
T ss_dssp HHHHHHHTCCSHHHHHHHHHHHHHHHCSBCCSHHHHHHHHHHHTHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhccccCCCCCHHHHHHHHHhccchHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHhhhC
Q psy10545 1349 DVIDDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRSTLAIVTSWSIYREI 1428 (1428)
Q Consensus 1349 d~~~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~~~a~~~a~~~y~~i 1428 (1428)
|++||+++||||||.|+|.+||++++|+..+..++++++++.+++++|+.||++|+.++..+|.++++++.+++.+|++|
T Consensus 173 Dv~eD~~~gR~YlP~~~l~~~gv~~~dl~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~r~~~~~~~~~y~~i 252 (294)
T 4hd1_A 173 DIDRDLALGRIYVPRADLEQFGATLDDIRARRATDGVRRCIALEVDRAQALFDEGRRLESLVPPRLARQLKLYRLGGEAI 252 (294)
T ss_dssp THHHHHHTTCBCSCHHHHHTTTCCHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSSCHHHHHHHHHHHHHHHHH
T ss_pred hchhhhccCceeCCHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>3acx_A Dehydrosqualene synthase; CRTM, carotenoid biosynthesis, staphyloxanthin biosynthesis, transferase, head-TO-head condensation, inhibitor; HET: 673; 1.31A {Staphylococcus aureus} PDB: 2zcp_A* 2zcq_A* 2zcr_A* 2zcs_A* 2zy1_A* 3acw_A* 2zco_A* 3acy_A* 3npr_A* 3nri_A* 3tfn_A* 3tfp_A* 3tfv_A* 3adz_A* 3lgz_B* 3vjd_A* 3vje_A* 3ae0_A* 4ea2_A* 4e9u_A* ...
Probab=100.00 E-value=4.5e-44 Score=409.00 Aligned_cols=229 Identities=26% Similarity=0.343 Sum_probs=216.9
Q ss_pred ccccccccccccccchhhHHHHHHHHhhhhccccccccCccCcchhhhhhhhhHHHHHHHHHHHHHHHhcCCC------C
Q psy10545 1187 KAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRACIGFK------M 1260 (1428)
Q Consensus 1187 ~~sg~~~a~~i~~l~~~~r~~~~~lYaf~r~~Ddi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~ 1260 (1428)
-..++++...++++|++.|+++++||+|||++|||+|++. ++. . |+||++.+..++.|.+ +
T Consensus 22 ~~~s~sF~~a~~~Lp~~~R~av~alYaf~R~~Ddi~D~~~--~~~----------~-L~~w~~~l~~~~~g~~~~~~~~~ 88 (293)
T 3acx_A 22 KKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYG--DIQ----------F-LNQIKEDIQSIEKYPYEYHHFQS 88 (293)
T ss_dssp HHHCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHGGGGTS--STH----------H-HHHHHHHHHHHHHCTTSCCCCSS
T ss_pred hccCCcHHHHHHhCCHHHHHHHHHHHHHHHHHhhHhccCC--CHH----------H-HHHHHHHHHHHhCCCCcccCCCC
Confidence 3468888899999999999999999999999999999853 222 2 8999999999888887 7
Q ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhHHHHHHHHHhhCCCc-cchHHHHHHHHH
Q psy10545 1261 KEPAFLALQKIISIHSFPVHLLFEHLDGFEMDVMERTYITLDETLGYCYHVAGTIGLIIAHLIGVKE-KDTLNCARNLGI 1339 (1428)
Q Consensus 1261 ~~p~~~~l~~~~~~~~l~~~~~~~li~~~~~dl~~~~~~t~~~l~~Y~~~vag~vg~~~~~~~~~~~-~~~~~~a~~~g~ 1339 (1428)
.||++.+|.+++++|++|.++|.+||+||++|+...+|+|++||+.|||+|||+||+|+++++|..+ ++..+.|++||+
T Consensus 89 ~~pv~~al~~~~~~~~l~~~~~~~li~g~~~Dl~~~~~~t~~dL~~Yc~~vAg~VG~l~~~l~g~~~~~~~~~~A~~lG~ 168 (293)
T 3acx_A 89 DRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGE 168 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTCCCCSSHHHHHHHHHHHTHHHHHHHHHHHCSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHhhHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999987 778899999999
Q ss_pred HHHHHHHHhcchhhhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHH
Q psy10545 1340 AFQLTNISRDVIDDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRSTLAIV 1419 (1428)
Q Consensus 1340 a~q~~nilrd~~~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~~~a~~ 1419 (1428)
|+|+||||||++||+++||+|||.|+|++||++++|+..+.+++++++++.+++++|++||.+|+.+++.+|.+++++++
T Consensus 169 AlQltNilRDv~eD~~~gR~YLP~d~l~~~gv~~e~l~~~~~~~~~~~~~~~l~~~A~~~~~~a~~~~~~lp~~~r~~~~ 248 (293)
T 3acx_A 169 SLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPIIE 248 (293)
T ss_dssp HHHHHHHHHCHHHHHHTTCCCSCHHHHHHHTCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTGGGSCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcEEeCHHHHHHcCCCHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHhHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhC
Q psy10545 1420 TSWSIYREI 1428 (1428)
Q Consensus 1420 ~a~~~y~~i 1428 (1428)
+++.+|++|
T Consensus 249 ~~~~~~~~i 257 (293)
T 3acx_A 249 LAARIYIEI 257 (293)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 4
>3vj8_A Squalene synthase; farnesyl-diphosphate farnesyltransferase, head-TO-head synth cholesterol biosynthesis, oxidoreductase, transferase; 1.52A {Homo sapiens} PDB: 3vj9_A 3vja_A 3vjb_A 3vjc_A* 3v66_A* 3lee_A* 3q2z_A* 3q30_A* 3asx_A* 1ezf_A*
Probab=100.00 E-value=1.3e-36 Score=350.95 Aligned_cols=218 Identities=19% Similarity=0.203 Sum_probs=185.3
Q ss_pred ccccccccccccccchhhHHHHHHHHhhhhccccccccCccCcchhhhhhhhhHHHHHHHHHHHHHHH---hcC-CCCCc
Q psy10545 1187 KAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRA---CIG-FKMKE 1262 (1428)
Q Consensus 1187 ~~sg~~~a~~i~~l~~~~r~~~~~lYaf~r~~Ddi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~-~~~~~ 1262 (1428)
-..+++++-.+++||+++|+++++||+|||.+|||+|++..+. . ....+|++|++.+... +.+ .+..+
T Consensus 21 ~~~srsF~la~~lLp~~~R~av~alYaf~R~aDdI~D~~~~~~-~-------~k~~~L~~~~~~l~~~~~~~~~~~~~~~ 92 (343)
T 3vj8_A 21 NQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISV-E-------KKVPLLHNFHSFLYQPDWRFMESKEKDR 92 (343)
T ss_dssp HHHHGGGHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHCTTSCH-H-------HHHHHHHHHHHHTTCTTCCCCCCCSTTT
T ss_pred HhcCCcHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhccccCCH-H-------HHHHHHHHHHHHHhcchhhhcCCChhhH
Confidence 3478899999999999999999999999999999999964221 1 2245899999987642 222 23445
Q ss_pred HHHHHHHHHHHHc-CCC-------HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhHHHHHHHHHhhCCCcc------
Q psy10545 1263 PAFLALQKIISIH-SFP-------VHLLFEHLDGFEMDVMERTYITLDETLGYCYHVAGTIGLIIAHLIGVKEK------ 1328 (1428)
Q Consensus 1263 p~~~~l~~~~~~~-~l~-------~~~~~~li~~~~~dl~~~~~~t~~~l~~Y~~~vag~vg~~~~~~~~~~~~------ 1328 (1428)
+++..+..++..| .++ .+.+.+|++||++|++ .+|.|++||+.|||+|||+||+|+++++|..+.
T Consensus 93 ~ll~~~p~v~~~f~~l~~~~~~~i~~~~~~m~~gm~~dl~-~~~~t~~~L~~Yc~~vAg~VG~l~~~l~~~~~~~~~~~~ 171 (343)
T 3vj8_A 93 QVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLD-KHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVG 171 (343)
T ss_dssp HHHHTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHGGG-CCCCSHHHHHHHHHHHTHHHHHHHHHHHHHHTSSCHHHH
T ss_pred HHHhcCcHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCHHHHHHHHHhCcHHHHHHHHHHhCCCCCccchhh
Confidence 6666555555443 333 2345568899999997 799999999999999999999999999987542
Q ss_pred chHHHHHHHHHHHHHHHHHhcchhhhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10545 1329 DTLNCARNLGIAFQLTNISRDVIDDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLN 1408 (1428)
Q Consensus 1329 ~~~~~a~~~g~a~q~~nilrd~~~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 1408 (1428)
+..+.|++||.|+|+||||||++||+.+||+|||.|+|.+||++++|+..+++++++++++.+++++|+.||.+|+.++.
T Consensus 172 ~~~~~A~~lG~AlQltNilRDv~eD~~~gR~YlP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~l~~~A~~~~~~a~~~~~ 251 (343)
T 3vj8_A 172 EDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLS 251 (343)
T ss_dssp HCHHHHHHHHHHHHHHHHHHTHHHHHHTTCCCSCHHHHTTTCSSGGGGGSGGGHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHhCCCeeCCHHHHHHcCCCHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcc
Q psy10545 1409 TLPLR 1413 (1428)
Q Consensus 1409 ~lp~~ 1413 (1428)
.||.+
T Consensus 252 ~L~~~ 256 (343)
T 3vj8_A 252 RLRNQ 256 (343)
T ss_dssp TCCCH
T ss_pred hCCcc
Confidence 99987
No 5
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=6.2e-33 Score=339.75 Aligned_cols=400 Identities=18% Similarity=0.201 Sum_probs=282.9
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC---chHHHHHHHHhcccccccc
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD---PNSIKLLFDLSKNRMENYV 788 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~---~~~~~~l~~~lG~~l~~~l 788 (1428)
+||||||||++||+||++|+++|++|+|||+++++||++.++..+|+.+|.|++++.. ...+.++++++|.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~---- 76 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASV---- 76 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCC----
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCc----
Confidence 5899999999999999999999999999999999999999999999999999866542 346788999998542
Q ss_pred eEEecCCceEEE-eCC--------CcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHH
Q psy10545 789 NLLPIKPFYRLY-WGK--------EKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTIND 859 (1428)
Q Consensus 789 ~~~~~~~~~~~~-~~~--------g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (1428)
.+.+.+...... +.+ +..+.+.... ... ++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-------------------------------~~~~ 117 (425)
T 3ka7_A 77 NIVRSEMTTVRVPLKKGNPDYVKGFKDISFNDFP--------SLL-------------------------------SYKD 117 (425)
T ss_dssp CEEECCCCEEEEESSTTCCSSTTCEEEEEGGGGG--------GGS-------------------------------CHHH
T ss_pred eEEecCCceEEeecCCCcccccccccceehhhhh--------hhC-------------------------------CHHH
Confidence 233322221111 111 3333322100 000 0000
Q ss_pred HHHhhHHHH----hhcccCCHHHHHHhhcCCHHHHHHHHhh-cccccCCCCchhH--HHHHHHHhccccceeeecCchHH
Q psy10545 860 MLFILPKLI----KIKAWKSVYSIVSQFIKNDYLKQAFSFN-SLFIGGNPFSTSS--IYTLIHALEYEWGIWFPKGGVGA 932 (1428)
Q Consensus 860 ~~~~~~~~~----~~~~~~s~~~~l~~~~~~~~l~~~l~~~-~~~~g~~p~~~s~--~~~~~~~~~~~~g~~~~~gG~~~ 932 (1428)
.......+. ......++.+|+.+++.++.++.++... ...++.++.+.++ .+..+......++.+++.||++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~ 197 (425)
T 3ka7_A 118 RMKIALLIVSTRKNRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKG 197 (425)
T ss_dssp HHHHHHHHHHTTTSCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHH
T ss_pred HHHHHHHHHhhhhcCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHH
Confidence 000000000 1124688999999999999888887643 3446777877776 44444443445678899999999
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCC-CCC--ChhHHHHHhh
Q psy10545 933 LIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQ-YAF--GKKKYMNLIK 1009 (1428)
Q Consensus 933 l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~-~~~--p~~~~~~l~~ 1009 (1428)
++++|++.++++|++|++|++|++|..+++++++|+++ |+++.||.||+|++++.+.+ |+++ ..+ |....+.+++
T Consensus 198 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~-ll~~~~~~~~~~~~~~~~~~ 275 (425)
T 3ka7_A 198 IIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAV-LCSEALSKEADAAYFKMVGT 275 (425)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHH-HTTTTCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHH-hcCCcccccCCHHHHHHhhC
Confidence 99999999999999999999999999999998888875 77899999999999998875 7753 333 6777788899
Q ss_pred cCCCCceEEEEEeecCCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCC
Q psy10545 1010 KKMSNSLFVIYFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNL 1089 (1428)
Q Consensus 1010 ~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~ 1089 (1428)
+.++ +.+++++++++++ ..++++++.++. .+...++.+|..||+++|+|++++.++...+.
T Consensus 276 ~~~~-~~~~v~l~~~~~~--~~~~~~~~~~~~---------------~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~- 336 (425)
T 3ka7_A 276 LQPS-AGIKICLAADEPL--VGHTGVLLTPYT---------------RRINGVNEVTQADPELAPPGKHLTMCHQYVAP- 336 (425)
T ss_dssp CCCB-EEEEEEEEESSCS--SCSSSEEECCSS---------------SSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-
T ss_pred cCCC-ceEEEEeecCCCc--cCcCEEEECCCh---------------hhcceEEeccCCCCCcCCCCCeEEEEEecccc-
Confidence 9988 5789999999884 345667665432 22456888999999999999999887654321
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCc
Q psy10545 1090 SNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTN 1169 (1428)
Q Consensus 1090 ~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~ 1169 (1428)
++.+..++.++.++++|++ ++|+.+..+..... | .+++..+.++ ...+|..++| ++|
T Consensus 337 -----~~~~~~~~~~~~~~~~l~~-~~p~~~~~~~~v~~-----~-------~~~~P~~~~~----~~~~~~~~~p-~~g 393 (425)
T 3ka7_A 337 -----ENVKNLESEIEMGLEDLKE-IFPGKRYEVLLIQS-----Y-------HDEWPVNRAA----SGTDPGNETP-FSG 393 (425)
T ss_dssp -----GGGGGHHHHHHHHHHHHHH-HSTTCCEEEEEEEE-----E-------BTTBCSBSSC----TTCCCCSBCS-SBT
T ss_pred -----ccccchHHHHHHHHHHHHH-hCCCCceEEEEEEE-----E-------CCCccccccc----cCCCCCCCCC-cCC
Confidence 1112224557999999998 89985432222111 1 1122111221 1245677776 999
Q ss_pred eEEecCCccC--CCCcccccccccccccccc
Q psy10545 1170 LYFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1170 Ly~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
||+||||+.+ |.||+||+.||+.+++.|.
T Consensus 394 L~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 394 LYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred eEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 9999999998 5689999999999998774
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=1.3e-31 Score=327.35 Aligned_cols=394 Identities=18% Similarity=0.219 Sum_probs=279.4
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC---chHHHHHHHHhcccccccc
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD---PNSIKLLFDLSKNRMENYV 788 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~---~~~~~~l~~~lG~~l~~~l 788 (1428)
+||+|||||++||+||++|+++|++|+||||++++||+++++..+|+.+|.|++.+.. ...+.++++++|.. .
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~----~ 76 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAK----V 76 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCC----C
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCc----c
Confidence 4899999999999999999999999999999999999999999999999999876532 34678899998853 2
Q ss_pred eEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHH
Q psy10545 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLI 868 (1428)
Q Consensus 789 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (1428)
++.+.++...+.+ +|..+.++.... .+.+.+...+..++..... . .
T Consensus 77 ~~~~~~~~~~~~~-~g~~~~~~~~~~-------~l~~~~~~~~~~~~~~~~~-----------~---------------~ 122 (421)
T 3nrn_A 77 EIVNSNPKGKILW-EGKIFHYRESWK-------FLSVKEKAKALKLLAEIRM-----------N---------------K 122 (421)
T ss_dssp CEEECSSSCEEEE-TTEEEEGGGGGG-------GCC--------CCHHHHHT-----------T---------------C
T ss_pred eEEECCCCeEEEE-CCEEEEcCCchh-------hCCHhHHHHHHHHHHHHHh-----------c---------------c
Confidence 4555555555554 666666553211 1111111111111100000 0 0
Q ss_pred hhcccCCHHHHHHhh-cCCHHHHHHHHh-hcccccCCCCchhH--HHHHHHHhccccceeeecCchHHHHHHHHHHHHHc
Q psy10545 869 KIKAWKSVYSIVSQF-IKNDYLKQAFSF-NSLFIGGNPFSTSS--IYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNL 944 (1428)
Q Consensus 869 ~~~~~~s~~~~l~~~-~~~~~l~~~l~~-~~~~~g~~p~~~s~--~~~~~~~~~~~~g~~~~~gG~~~l~~~L~~~l~~~ 944 (1428)
......++.+|+.++ +.++.++.++.. ....++.++.+.++ ++..+.......|.++++||++.++++|++.++++
T Consensus 123 ~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~~~~~ 202 (421)
T 3nrn_A 123 LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMEN 202 (421)
T ss_dssp CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHHHHHC
Confidence 001247889999998 888888877653 34445777777776 44444444445678899999999999999999999
Q ss_pred CcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeec
Q psy10545 945 GGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLS 1024 (1428)
Q Consensus 945 G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~ 1024 (1428)
|++|++|++|++|..+++++ | +.+|+++.||.||+|++++.+.+ |++.+.+|....+.+.++.++ +.++++++++
T Consensus 203 G~~i~~~~~V~~i~~~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~-ll~~~~~~~~~~~~~~~~~~~-~~~~v~l~~~ 277 (421)
T 3nrn_A 203 KGKILTRKEVVEINIEEKKV--Y-TRDNEEYSFDVAISNVGVRETVK-LIGRDYFDRDYLKQVDSIEPS-EGIKFNLAVP 277 (421)
T ss_dssp TCEEESSCCEEEEETTTTEE--E-ETTCCEEECSEEEECSCHHHHHH-HHCGGGSCHHHHHHHHTCCCC-CEEEEEEEEE
T ss_pred CCEEEcCCeEEEEEEECCEE--E-EeCCcEEEeCEEEECCCHHHHHH-hcCcccCCHHHHHHHhCCCCC-ceEEEEEEEc
Confidence 99999999999999888885 5 45778999999999999998875 887555777777889999998 7899999999
Q ss_pred CCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCCCCcHHHHHHHH
Q psy10545 1025 EQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSSINWSEESIKLK 1104 (1428)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~ 1104 (1428)
++ .+.++++++.++.. ...++.+|..||+++|+|++++.+....+... . ++..
T Consensus 278 ~~--~~~~~~~~~~~~~~----------------~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~--------~-~~~~ 330 (421)
T 3nrn_A 278 GE--PRIGNTIVFTPGLM----------------INGFNEPSALDKSLAREGYTLIMAHMALKNGN--------V-KKAI 330 (421)
T ss_dssp SS--CSSCSSEEECTTSS----------------SCEEECGGGTCGGGSCTTEEEEEEEEECTTCC--------H-HHHH
T ss_pred CC--cccCCeEEEcCCcc----------------eeeEeccCCCCCCcCCCCceEEEEEEeecccc--------H-HHHH
Confidence 87 24566777765432 22478899999999999999988887664321 1 2447
Q ss_pred HHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCceEEecCCccCCCCc-
Q psy10545 1105 NIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAAN- 1183 (1428)
Q Consensus 1105 ~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv- 1183 (1428)
+.++++|++ .+| ...+...... +..+.. +...+. .++. .+ + +|||+|||++.+++|+
T Consensus 331 ~~~~~~L~~-~~p--~~~~~~~~~~-~~~~p~---------~~~~~~------~~~~-~~-~-~gl~laGd~~~~~~g~~ 388 (421)
T 3nrn_A 331 EKGWEELLE-IFP--EGEPLLAQVY-RDGNPV---------NRTRAG------LHIE-WP-L-NEVLVVGDGYRPPGGIE 388 (421)
T ss_dssp HHHHHHHHH-HCT--TCEEEEEEEC-----------------------------CCC-CC-C-SSEEECSTTCCCTTCCH
T ss_pred HHHHHHHHH-HcC--CCeEEEeeec-cCCCCc---------ccccCC------CCCC-CC-C-CcEEEECCcccCCCcee
Confidence 899999998 888 2222222211 111100 100000 1122 34 4 9999999999977666
Q ss_pred -cccccccccccccc
Q psy10545 1184 -KIIKAGSKSFSSAI 1197 (1428)
Q Consensus 1184 -~GA~~sg~~~a~~i 1197 (1428)
+||+.||+.+|+.|
T Consensus 389 ~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 389 VDGIALGVMKALEKL 403 (421)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHh
Confidence 99999999999987
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.96 E-value=1.2e-29 Score=315.51 Aligned_cols=418 Identities=13% Similarity=0.102 Sum_probs=271.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhcccccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNRMENYV 788 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~~l 788 (1428)
.++||+|||||++||+||+.|+++|++|+|||+++++||+++|.+.+|+.+|.|++++.. ...+.++++++|+. +.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~--~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLE--GRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCG--GGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCc--cee
Confidence 468999999999999999999999999999999999999999999999999999999875 45678899999953 222
Q ss_pred eEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHH
Q psy10545 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLI 868 (1428)
Q Consensus 789 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (1428)
..........+.+.+|+.+.++.+...+.. . .... +....+ .. ......+..
T Consensus 93 ~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~---~-~~~~------~~~~~~-~~----~~~~~~~~~------------- 144 (478)
T 2ivd_A 93 RAADPAAKRRYVYTRGRLRSVPASPPAFLA---S-DILP------LGARLR-VA----GELFSRRAP------------- 144 (478)
T ss_dssp ECSCSSCCCEEEEETTEEEECCCSHHHHHT---C-SSSC------HHHHHH-HH----GGGGCCCCC-------------
T ss_pred eecCccccceEEEECCEEEECCCCHHHhcc---C-CCCC------HHHHHH-Hh----hhhhcCCCC-------------
Confidence 211111233455667777777665433211 0 0000 000000 00 011110000
Q ss_pred hhcccCCHHHHHHhhcCCHHHHHHHH-hhcccccCCCCchhHHHH--HHHH-----------h-------------c-cc
Q psy10545 869 KIKAWKSVYSIVSQFIKNDYLKQAFS-FNSLFIGGNPFSTSSIYT--LIHA-----------L-------------E-YE 920 (1428)
Q Consensus 869 ~~~~~~s~~~~l~~~~~~~~l~~~l~-~~~~~~g~~p~~~s~~~~--~~~~-----------~-------------~-~~ 920 (1428)
.....++.+|+.+.+.++..+.++. .....++.+|.+.++... .+.. + . ..
T Consensus 145 -~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (478)
T 2ivd_A 145 -EGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTA 223 (478)
T ss_dssp -TTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCS
T ss_pred -CCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccccc
Confidence 1236799999999888777777665 334556777877765221 1100 0 0 11
Q ss_pred ----cceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEe---cCCcEEEcCEEEEcCCHHHHHHHh
Q psy10545 921 ----WGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHL---KNGQIFDADIIVSNADIINTYRNL 993 (1428)
Q Consensus 921 ----~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~---~~G~~i~ad~VV~A~~~~~~~~~L 993 (1428)
.+.++++||++.|+++|++.+ |++|+++++|++|..++++ +.|++ .+|+++.||+||+|+|+..+.. +
T Consensus 224 ~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~-l 298 (478)
T 2ivd_A 224 PKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLAREDGG-WRLIIEEHGRRAELSVAQVVLAAPAHATAK-L 298 (478)
T ss_dssp CCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC--C-CEEEEEETTEEEEEECSEEEECSCHHHHHH-H
T ss_pred ccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe-EEEEEeecCCCceEEcCEEEECCCHHHHHH-H
Confidence 467899999999999999887 5799999999999988776 67887 6788899999999999887765 6
Q ss_pred cCCCCCChhHHHHHhhcCCCCceEEEEEeecCCc-CCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCC
Q psy10545 994 LGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQY-THLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSL 1072 (1428)
Q Consensus 994 l~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ 1072 (1428)
++ .+|+...+.++++.++ +..++++.+++++ +.......+++ .. .+.+...+.+++..+|+.
T Consensus 299 l~--~l~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~s~~~~~~ 361 (478)
T 2ivd_A 299 LR--PLDDALAALVAGIAYA-PIAVVHLGFDAGTLPAPDGFGFLVP-AE-------------EQRRMLGAIHASTTFPFR 361 (478)
T ss_dssp HT--TTCHHHHHHHHTCCBC-CEEEEEEEECTTSSCCCCSSEEECC-GG-------------GCCSCCEEEEHHHHCGGG
T ss_pred hh--ccCHHHHHHHhcCCCC-cEEEEEEEEccccCCCCCceEEEec-CC-------------CCCceEEEEEEcccCCCc
Confidence 64 3677777889999988 7889999999884 32112222221 10 112334455565556667
Q ss_pred CCCCccEEEEEEecCCCCCCCCCc-HHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccc
Q psy10545 1073 APTGCSTFYALIPVPNLSNSSINW-SEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPL 1151 (1428)
Q Consensus 1073 ap~G~~~l~v~~~~p~~~~~~~~~-~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~ 1151 (1428)
+|+|+.++++++..+... .| +..++++.+.++++|++ .+|... .+....+. .| .++...+.++
T Consensus 362 ~p~g~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~-~~~~~~-~p~~~~~~---~w-------~~~~p~~~~g 425 (478)
T 2ivd_A 362 AEGGRVLYSCMVGGARQP----GLVEQDEDALAALAREELKA-LAGVTA-RPSFTRVF---RW-------PLGIPQYNLG 425 (478)
T ss_dssp BSTTCEEEEEEEECTTCG----GGGGSCHHHHHHHHHHHHHH-HHCCCS-CCSEEEEE---EE-------SSCCBCCBTT
T ss_pred CCCCCEEEEEEeCCcCCc----cccCCCHHHHHHHHHHHHHH-HhCCCC-CCcEEEEE---EC-------CCcccCCCcC
Confidence 788887777776543321 23 34568899999999998 777643 22211110 11 1111111111
Q ss_pred cc-cccccCCCCCCCCCCceEEecCCccCCCCccccccccccccccccc
Q psy10545 1152 LT-QSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIKL 1199 (1428)
Q Consensus 1152 ~~-q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~~ 1199 (1428)
.. .....++.... ++||||||+++ +|.||+||+.||+.+|+.|..
T Consensus 426 ~~~~~~~~~~~~~~--~~~l~~aG~~~-~g~gv~gA~~SG~~aA~~i~~ 471 (478)
T 2ivd_A 426 HLERVAAIDAALQR--LPGLHLIGNAY-KGVGLNDCIRNAAQLADALVA 471 (478)
T ss_dssp HHHHHHHHHHHHHT--STTEEECSTTT-SCCSHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhh--CCCEEEEccCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 10 00001111111 58999999998 577899999999999998853
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.96 E-value=5.3e-28 Score=298.43 Aligned_cols=425 Identities=12% Similarity=0.066 Sum_probs=265.5
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhccccccc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNRMENY 787 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~~ 787 (1428)
+.++||+|||||++||+||++|+++|++|+|+|+++++||++.+...+|+.+|.|++++.. ...+.++++++|++...
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~- 81 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFE- 81 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEE-
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcccc-
Confidence 4568999999999999999999999999999999999999999999999999999999865 34667888999864211
Q ss_pred ceEEecCCceEEEeCC-CcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHH
Q psy10545 788 VNLLPIKPFYRLYWGK-EKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPK 866 (1428)
Q Consensus 788 l~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1428)
.......+.+.+ |..+.+..... ...+.....+..++..+..+..... ...++.. +.
T Consensus 82 ----~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~ 139 (453)
T 2yg5_A 82 ----RYREGESVYISSAGERTRYTGDSF-------PTNETTKKEMDRLIDEMDDLAAQIG---AEEPWAH--------PL 139 (453)
T ss_dssp ----CCCCSEEEEECTTSCEEEECSSSC-------SCCHHHHHHHHHHHHHHHHHHHHHC---SSCGGGS--------TT
T ss_pred ----cccCCCEEEEeCCCceeeccCCCC-------CCChhhHHHHHHHHHHHHHHHhhcC---CCCCCCC--------cc
Confidence 111122222332 55555432110 0001111112222222222222100 0011111 00
Q ss_pred HHhhcccCCHHHHHHhhcCCHHHHHHHHhhc-ccccCCCC-chhHHHHHHHHhcc-----------ccceeeecCchHHH
Q psy10545 867 LIKIKAWKSVYSIVSQFIKNDYLKQAFSFNS-LFIGGNPF-STSSIYTLIHALEY-----------EWGIWFPKGGVGAL 933 (1428)
Q Consensus 867 ~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~-~~~g~~p~-~~s~~~~~~~~~~~-----------~~g~~~~~gG~~~l 933 (1428)
... ....++.+|+.+.+.++.++.++.... ..++.+|. +.++.+.+. ++.. ....++++||++.+
T Consensus 140 ~~~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~gG~~~l 217 (453)
T 2yg5_A 140 ARD-LDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVL-MAASAGSFSHLVDEDFILDKRVIGGMQQV 217 (453)
T ss_dssp HHH-HHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHH-HHHHTTCHHHHHCHHHHTCEEETTCTHHH
T ss_pred hhh-hhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHH-HhccCCcHhhhccCCCcceEEEcCChHHH
Confidence 011 136899999999999999988877543 45577887 777644322 1111 11246899999999
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCC
Q psy10545 934 IKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMS 1013 (1428)
Q Consensus 934 ~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~ 1013 (1428)
+++|++.+ |++|++|++|++|..++++.+.|++ +|+++.||+||+|+|+..+. .++..+.+|..+.+.++++.++
T Consensus 218 ~~~l~~~l---g~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~-~l~~~p~lp~~~~~~i~~~~~~ 292 (453)
T 2yg5_A 218 SIRMAEAL---GDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYS-RISYDPPLPRRQHQMHQHQSLG 292 (453)
T ss_dssp HHHHHHHH---GGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGG-GSEEESCCCHHHHHHGGGEEEC
T ss_pred HHHHHHhc---CCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHh-cCEeCCCCCHHHHHHHhcCCCc
Confidence 99998866 7899999999999998886345766 67789999999999888654 4665667888888889999887
Q ss_pred CceEEEEEeecCCc-CCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCC-ccEEEEEEecCCCCC
Q psy10545 1014 NSLFVIYFGLSEQY-THLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTG-CSTFYALIPVPNLSN 1091 (1428)
Q Consensus 1014 ~s~~~v~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G-~~~l~v~~~~p~~~~ 1091 (1428)
+..++++.+++++ +........+. ++.+...+..++ .|++ +.++.+++..+..
T Consensus 293 -~~~kv~l~~~~~~w~~~~~~g~~~~----------------~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~-- 347 (453)
T 2yg5_A 293 -LVIKVHAVYETPFWREDGLSGTGFG----------------ASEVVQEVYDNT------NHEDDRGTLVAFVSDEKA-- 347 (453)
T ss_dssp -CEEEEEEEESSCGGGGGTEEEEEEC----------------TTSSSCEEEECC------CTTCSSEEEEEEEEHHHH--
T ss_pred -ceEEEEEEECCCCCCCCCCCceeec----------------CCCCeEEEEeCC------CCCCCCCEEEEEeccHHH--
Confidence 6889999999884 32111111121 111222222222 3344 3456666543211
Q ss_pred CCCCcHH-HHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccc-cccccccccccCCCCCCCCCCc
Q psy10545 1092 SSINWSE-ESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFS-FAPLLTQSAWFRPHNRDKNLTN 1169 (1428)
Q Consensus 1092 ~~~~~~~-~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g-~~~~~~q~~~~rp~~~t~~i~~ 1169 (1428)
..|.. +++++++.++++|++ ++|.-......... .+|.+. ....|+..+ +.++ +....++..++| ++|
T Consensus 348 --~~~~~~~~~~~~~~~l~~L~~-~~~~~~~~p~~~~~---~~W~~~-~~~~G~~~~~~~~g--~~~~~~~~~~~p-~~~ 417 (453)
T 2yg5_A 348 --DAMFELSAEERKATILASLAR-YLGPKAEEPVVYYE---SDWGSE-EWTRGCYAASFDLG--GLHRYGADSRTP-VGP 417 (453)
T ss_dssp --HHHHHSCHHHHHHHHHHHHHH-HHCGGGGCCSEEEE---CCTTTC-TTTCSSSCEEECTT--HHHHHGGGTTCC-BTT
T ss_pred --HHHhcCCHHHHHHHHHHHHHH-HhCccCCCccEEEE---eecCCC-CCCCCCCcCcCCCC--ccccchHHHhCC-cCc
Confidence 13433 467889999999998 66531111111111 122221 112344221 1222 111123455666 899
Q ss_pred eEEecCCccC--CCCcccccccccccccccc
Q psy10545 1170 LYFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1170 Ly~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
|||||++|++ .++|+||+.||+.+|+.|.
T Consensus 418 l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~ 448 (453)
T 2yg5_A 418 IHFSCSDIAAEGYQHVDGAVRMGQRTAADII 448 (453)
T ss_dssp EEECCGGGCSTTTTSHHHHHHHHHHHHHHHH
T ss_pred eEEeecccccccccchHHHHHHHHHHHHHHH
Confidence 9999999853 1279999999999999885
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.96 E-value=8.1e-29 Score=310.83 Aligned_cols=426 Identities=14% Similarity=0.139 Sum_probs=270.2
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeC-CeEEcccccccCC-chHHHHHHHHhcccccccc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQD-GFIFDAGPTVITD-PNSIKLLFDLSKNRMENYV 788 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~-G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~~l 788 (1428)
++||||||||++||+||++|+++|++|+|||+++++||+++|.+.. |+.+|.|++++.. .+.+.++++++|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~-- 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYK-- 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEE--
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCccee--
Confidence 5799999999999999999999999999999999999999999985 9999999999875 45677889999864321
Q ss_pred eEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHH
Q psy10545 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLI 868 (1428)
Q Consensus 789 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (1428)
.. .......+.+|..+.++..... ...+.....+..++.....+.... . ...++.. +...
T Consensus 82 --~~-~~~~~~~~~~g~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~--------~~~~ 141 (520)
T 1s3e_A 82 --VN-EVERLIHHVKGKSYPFRGPFPP------VWNPITYLDHNNFWRTMDDMGREI-P--SDAPWKA--------PLAE 141 (520)
T ss_dssp --CC-CSSEEEEEETTEEEEECSSSCC------CCSHHHHHHHHHHHHHHHHHHTTS-C--TTCGGGS--------TTHH
T ss_pred --cc-cCCceEEEECCEEEEecCCCCC------CCCHHHHHHHHHHHHHHHHHHhhc-C--cCCCccc--------cchh
Confidence 11 1122233445665555432100 000111122233333333322110 0 0011110 0000
Q ss_pred hhcccCCHHHHHHhhcCCHHHHHHHHhh-cccccCCCCchhHHHHHHHHhc------------cccceeeecCchHHHHH
Q psy10545 869 KIKAWKSVYSIVSQFIKNDYLKQAFSFN-SLFIGGNPFSTSSIYTLIHALE------------YEWGIWFPKGGVGALIK 935 (1428)
Q Consensus 869 ~~~~~~s~~~~l~~~~~~~~l~~~l~~~-~~~~g~~p~~~s~~~~~~~~~~------------~~~g~~~~~gG~~~l~~ 935 (1428)
. ....++.+|+.+.+.++.++.++... ...++.++.+.++.+.+. ++. .....++++||++.+++
T Consensus 142 ~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~ 219 (520)
T 1s3e_A 142 E-WDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLW-YVKQCGGTTRIISTTNGGQERKFVGGSGQVSE 219 (520)
T ss_dssp H-HHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHH-HHHTTTCHHHHHCSTTSTTSEEETTCTHHHHH
T ss_pred h-hhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHH-HHhhcCchhhhcccCCCcceEEEeCCHHHHHH
Confidence 1 13689999999999999988887743 356678888887644322 111 11224689999999999
Q ss_pred HHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCc
Q psy10545 936 ALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNS 1015 (1428)
Q Consensus 936 ~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s 1015 (1428)
+|++.+ |++|++|++|++|..+++++ .|++.+|+++.||+||+|+|+..+. .++.++.+|..+.+.++++.++ +
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~~~v-~v~~~~g~~~~ad~VI~a~p~~~l~-~l~~~p~lp~~~~~~i~~~~~~-~ 293 (520)
T 1s3e_A 220 RIMDLL---GDRVKLERPVIYIDQTRENV-LVETLNHEMYEAKYVISAIPPTLGM-KIHFNPPLPMMRNQMITRVPLG-S 293 (520)
T ss_dssp HHHHHH---GGGEESSCCEEEEECSSSSE-EEEETTSCEEEESEEEECSCGGGGG-GSEEESCCCHHHHHHTTSCCBC-C
T ss_pred HHHHHc---CCcEEcCCeeEEEEECCCeE-EEEECCCeEEEeCEEEECCCHHHHc-ceeeCCCCCHHHHHHHHhCCCc-c
Confidence 998876 78999999999999888774 4888999999999999999988765 4665667888888899999987 6
Q ss_pred eEEEEEeecCCc-CCCcceE-EEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCC
Q psy10545 1016 LFVIYFGLSEQY-THLAHHT-IFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSS 1093 (1428)
Q Consensus 1016 ~~~v~l~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~ 1093 (1428)
..++++.+++++ +...... +++.. .+.+..++..+ +..+.+..++..++..+..
T Consensus 294 ~~kv~l~~~~~~w~~~~~~g~~~~~~---------------~~~~~~~~~d~-----~~~~~~~~~l~~~~~~~~a---- 349 (520)
T 1s3e_A 294 VIKCIVYYKEPFWRKKDYCGTMIIDG---------------EEAPVAYTLDD-----TKPEGNYAAIMGFILAHKA---- 349 (520)
T ss_dssp EEEEEEECSSCGGGGGTEEEEEEECS---------------TTCSCSEEEEC-----CCTTSCSCEEEEEEETHHH----
T ss_pred eEEEEEEeCCCcccCCCCCceeeccC---------------CCCceEEEeeC-----CCCCCCCCEEEEEccchhh----
Confidence 889999999984 3221111 12111 01122222222 2222334566666543211
Q ss_pred CCcHH-HHHHHHHHHHHHHHhccCCCc-cCceEEEEecCcccHHHHhCCCCCccccc-ccccccccccCCCCCCCCCCce
Q psy10545 1094 INWSE-ESIKLKNIVFMYLEQYCIPNL-RKKLITQRIFTPNDFKDVLGSYLGSAFSF-APLLTQSAWFRPHNRDKNLTNL 1170 (1428)
Q Consensus 1094 ~~~~~-~~ee~~~~vl~~L~~~~~P~l-~~~i~~~~~~tp~~~~~~~~~~~G~~~g~-~~~~~q~~~~rp~~~t~~i~~L 1170 (1428)
..|.. +++++.+.++++|++ ++|.- ......... ..|.+. ....|+..+. .++ +....++..++| ++||
T Consensus 350 ~~~~~~~~~e~~~~vl~~L~~-~~~~~~~~~p~~~~~---~~W~~~-~~~~G~~~~~~~~g--~~~~~~~~l~~p-~~~L 421 (520)
T 1s3e_A 350 RKLARLTKEERLKKLCELYAK-VLGSLEALEPVHYEE---KNWCEE-QYSGGCYTTYFPPG--ILTQYGRVLRQP-VDRI 421 (520)
T ss_dssp HHHTTSCHHHHHHHHHHHHHH-HHTCGGGGCCSEEEE---EEGGGC-TTTCSSSCBCCCTT--HHHHHGGGTTCC-BTTE
T ss_pred hhhhcCCHHHHHHHHHHHHHH-HhCccccCCccEEEE---EeeCCC-CCCCCCCccccCCC--ccccchHHHhCC-CCCE
Confidence 12322 467889999999998 67642 111111111 122221 1223443321 222 111234455666 8999
Q ss_pred EEecCCccC--CCCcccccccccccccccc
Q psy10545 1171 YFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1171 y~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
||||++|.+ .++|+||+.||..+|+.|.
T Consensus 422 ~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~ 451 (520)
T 1s3e_A 422 YFAGTETATHWSGYMEGAVEAGERAAREIL 451 (520)
T ss_dssp EECSGGGCSSSTTSHHHHHHHHHHHHHHHH
T ss_pred EEeehhhcCcCcEEhHHHHHHHHHHHHHHH
Confidence 999999842 2379999999999999885
No 10
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.95 E-value=3.9e-27 Score=289.14 Aligned_cols=389 Identities=14% Similarity=0.179 Sum_probs=255.6
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCC-eE---------------Eccc--------c
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDG-FI---------------FDAG--------P 764 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G-~~---------------~d~G--------~ 764 (1428)
+.++||||||||++||+||+.|+++|++|+|+|+++++||+++|++.+| +. ++.| +
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 3568999999999999999999999999999999999999999987655 22 2333 3
Q ss_pred cccCCchHHHHHHHHhcccccccceEEecCCceEEEeCCCcEEEecCC-HHHHHHHHHhhCcccHHHHHHHHHHHHHHHH
Q psy10545 765 TVITDPNSIKLLFDLSKNRMENYVNLLPIKPFYRLYWGKEKFLNYEDN-IKDLEKQIAKFNLNDIKGYRLFLNYSKKVFK 843 (1428)
Q Consensus 765 ~~i~~~~~~~~l~~~lG~~l~~~l~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 843 (1428)
+++..++.+.++++++|. .+++++.+.+..+ .+.+|+.+.++.+ .+.+...+...+ +...+.+|+..+.....
T Consensus 89 ~~l~~~~~l~~ll~~lg~--~~~l~~~~~~~~~--~~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ 162 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDV--TRYVDFKQVSGSY--VFKQGKIYKVPANEIEAISSPLMGIF--EKRRMKKFLEWISSYKE 162 (453)
T ss_dssp CBEETTSHHHHHHHHHTG--GGTCCEEECCCEE--EEETTEEEECCSSHHHHHHCTTSCHH--HHHHHHHHHHHHHHCBT
T ss_pred ceeecCcHHHHHHHhcCC--ccceEEEEcccee--EEeCCeEEECCCChHHHHhhhccchh--hHHHHHHHHHHHHHhcc
Confidence 333355678899999994 5567787777543 3557888888887 444443332221 34455555554443211
Q ss_pred HhhhhhcccCcccHHHHHHhhHHHHhhcccCCHHHHHHhhcCCHHHHHHHHhhcccccC-----CCCchhHHHHHHHHh-
Q psy10545 844 EGYLSFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGG-----NPFSTSSIYTLIHAL- 917 (1428)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~g~-----~p~~~s~~~~~~~~~- 917 (1428)
. .|. .+ . ... ....++.+|+.+++.++.++.++.......+. .|...+. ..+..+.
T Consensus 163 ~-------~p~-~~----~----~~~-~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~-~~~~~~~~ 224 (453)
T 2bcg_G 163 D-------DLS-TH----Q----GLD-LDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSF-ERILLYCQ 224 (453)
T ss_dssp T-------BGG-GS----T----TCC-TTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHH-HHHHHHHH
T ss_pred C-------Cch-hh----h----ccc-cccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHH-HHHHHHHH
Confidence 0 010 00 0 001 13678999999999999999887643332111 2221111 1111111
Q ss_pred ---cccccee-eecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEe--CCeEEEEEecCCcEEEcCEEEEcCCHHHHHH
Q psy10545 918 ---EYEWGIW-FPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVN--NNKVNKVHLKNGQIFDADIIVSNADIINTYR 991 (1428)
Q Consensus 918 ---~~~~g~~-~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~--~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~ 991 (1428)
....+.| +|+||++.++++|++.+++.|++|+++++|++|..+ ++++++|++ +|+++.||+||+|++++..
T Consensus 225 s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~-- 301 (453)
T 2bcg_G 225 SVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE-- 301 (453)
T ss_dssp HHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG--
T ss_pred HHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch--
Confidence 1223455 999999999999999999999999999999999998 888888887 5778999999999977611
Q ss_pred HhcCCCCCChhHHHHHhhcC-CCCceEEEEEeecCCcCC---CcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCC
Q psy10545 992 NLLGQYAFGKKKYMNLIKKK-MSNSLFVIYFGLSEQYTH---LAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSV 1067 (1428)
Q Consensus 992 ~Ll~~~~~p~~~~~~l~~~~-~~~s~~~v~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~ 1067 (1428)
.+.+.. ++++.+++ +++++|. ..++.++++. +.++.++.+|++.++.
T Consensus 302 --------------~l~~~~~~~~~~~~i---~~~~~~~~~~~~~~~ii~~~------------~~~~~~~~~~v~~~s~ 352 (453)
T 2bcg_G 302 --------------KCKSTGQRVIRAICI---LNHPVPNTSNADSLQIIIPQ------------SQLGRKSDIYVAIVSD 352 (453)
T ss_dssp --------------GEEEEEEEEEEEEEE---ESSCCTTSTTCSSEEEEECG------------GGTTCSSCEEEEEEEG
T ss_pred --------------hhcccCCcceeEEEE---EccccCCCCCCccEEEEeCc------------cccCCCCCEEEEEeCC
Confidence 122223 34344444 7888763 3455665531 2245678999999998
Q ss_pred CCCCCCCCCccEEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccc
Q psy10545 1068 TDLSLAPTGCSTFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFS 1147 (1428)
Q Consensus 1068 ~d~s~ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g 1147 (1428)
.| +++|+|++++++++++|... ..++ +...++. +.|.....+...+ .+.
T Consensus 353 ~d-~~aP~G~~~~~v~~~~~~~~--------~~~~----l~~~~~~-l~~~~~~~~~~~~-----------------~~~ 401 (453)
T 2bcg_G 353 AH-NVCSKGHYLAIISTIIETDK--------PHIE----LEPAFKL-LGPIEEKFMGIAE-----------------LFE 401 (453)
T ss_dssp GG-TSSCTTCEEEEEEEECCSSC--------HHHH----THHHHGG-GCSCSEEEEEEEE-----------------EEE
T ss_pred CC-CCCCCCcEEEEEEEecCCCC--------HHHH----HHHHHHH-hhhHHHhhccchh-----------------eee
Confidence 88 89999999999999876532 1222 2344454 4443322111111 010
Q ss_pred cccccccccccCCCCCCCCCCceEEecCCccCCCCcccccccccccccccc
Q psy10545 1148 FAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1148 ~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
|.... .-+|+|++|++.. ...+++++.+++.++++|.
T Consensus 402 ------------~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 402 ------------PREDG-SKDNIYLSRSYDA-SSHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp ------------ESSCS-TTTSEEECCCCCS-CSBSHHHHHHHHHHHHHHH
T ss_pred ------------ecCCC-CCCCEEECCCCCc-cccHHHHHHHHHHHHHHHH
Confidence 11111 1489999998875 3457999999999888875
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.95 E-value=1.4e-26 Score=288.97 Aligned_cols=420 Identities=14% Similarity=0.053 Sum_probs=258.9
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhcccccccceE
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNRMENYVNL 790 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~~l~~ 790 (1428)
+||+|||||++||+||++|+++|++|+|||+++++|||++|.+.+|+.+|.|+++++. ...+.++++++|+ .+.+..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl--~~~~~~ 117 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKM--HNALSP 117 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTC--TTCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCC--cceeec
Confidence 7999999999999999999999999999999999999999999999999999999974 3456677788885 222222
Q ss_pred Ee--cCCceEEEeCC--CcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHH---hhhhhcccCcccHHHHHHh
Q psy10545 791 LP--IKPFYRLYWGK--EKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKE---GYLSFASKSFLTINDMLFI 863 (1428)
Q Consensus 791 ~~--~~~~~~~~~~~--g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 863 (1428)
.. ......+.+.+ |....++. ......+ . .....+... ....+...++..+. .
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~- 177 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTYMTH--EAEDELL-----------R---SALHKFTNVDGTNGRTVLPFPHDMFY---V- 177 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEEECH--HHHHHHH-----------H---HHHHHHHCSSSSTTTTTCSCTTSTTS---S-
T ss_pred ccccCCCceEEEecCCCCceeecCH--HHHHHHH-----------H---HHHHHHHccchhhhhhcCCCCCCccc---C-
Confidence 21 11222333433 44444432 1111100 0 011111110 00011111111100 0
Q ss_pred hHHHHhhcccCCHHHHHHhhc--CCHHHHHHHHhh-cccccCCCCchhHHHHHHHH--h-------ccccceeeecCchH
Q psy10545 864 LPKLIKIKAWKSVYSIVSQFI--KNDYLKQAFSFN-SLFIGGNPFSTSSIYTLIHA--L-------EYEWGIWFPKGGVG 931 (1428)
Q Consensus 864 ~~~~~~~~~~~s~~~~l~~~~--~~~~l~~~l~~~-~~~~g~~p~~~s~~~~~~~~--~-------~~~~g~~~~~gG~~ 931 (1428)
+....+ +..++.+|+.+.. .++..+.++... ..+++.++.+.++...+... . ....+.++++||++
T Consensus 178 -~~~~~~-~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~ 255 (495)
T 2vvm_A 178 -PEFRKY-DEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQS 255 (495)
T ss_dssp -TTHHHH-HTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHH
T ss_pred -cchhhh-hhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHH
Confidence 001112 3678999999876 567777777643 34456677777653322111 0 11235678999999
Q ss_pred HHHHHHHHHHHHcC-cEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhc
Q psy10545 932 ALIKALIKLFQNLG-GNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKK 1010 (1428)
Q Consensus 932 ~l~~~L~~~l~~~G-~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~ 1010 (1428)
.+++.|.+.+++.| ++|++|++|++|..++++ +.|++.+|+++.||+||+|+|+..+.. +...+.+|..+.++++++
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~~l~~-i~~~p~lp~~~~~ai~~~ 333 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTARDGREFVAKRVVCTIPLNVLST-IQFSPALSTERISAMQAG 333 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEETTCCEEEEEEEEECCCGGGGGG-SEEESCCCHHHHHHHHHC
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEECCCCEEEcCEEEECCCHHHHhh-eeeCCCCCHHHHHHHHhc
Confidence 99999999999999 999999999999988776 568888898899999999999887754 554566888888999999
Q ss_pred CCCCceEEEEEeecCCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCC
Q psy10545 1011 KMSNSLFVIYFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLS 1090 (1428)
Q Consensus 1011 ~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~ 1090 (1428)
.+. +..+|++.+++++. .....+..+ +.+..++... ...|.|..++..++.. ..
T Consensus 334 ~~~-~~~kv~l~~~~~~~--~~~~g~~~~----------------~~~~~~~~~~-----~~~~~~~~vl~~~~~~--~~ 387 (495)
T 2vvm_A 334 HVS-MCTKVHAEVDNKDM--RSWTGIAYP----------------FNKLCYAIGD-----GTTPAGNTHLVCFGNS--AN 387 (495)
T ss_dssp CCC-CCEEEEEEESCGGG--GGEEEEECS----------------SCSSCEEEEE-----EECTTSCEEEEEEECS--TT
T ss_pred CCC-ceeEEEEEECCccC--CCceeEecC----------------CCCcEEEecC-----CCCCCCCeEEEEEeCc--cc
Confidence 987 57899999998741 111111111 1111112111 1234565666655421 11
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCce
Q psy10545 1091 NSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNL 1170 (1428)
Q Consensus 1091 ~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~L 1170 (1428)
.+ ..++..+.++++|++ ++|+.. .+....+ ..|.+..+. .|+...+.++.. ...++..+.| ++||
T Consensus 388 ----~~--~~~e~~~~~~~~L~~-~~~~~~-~~~~~~~---~~W~~dp~~-~g~y~~~~~g~~--~~~~~~l~~p-~~~l 452 (495)
T 2vvm_A 388 ----HI--QPDEDVRETLKAVGQ-LAPGTF-GVKRLVF---HNWVKDEFA-KGAWFFSRPGMV--SECLQGLREK-HGGV 452 (495)
T ss_dssp ----CC--CTTTCHHHHHHHHHT-TSTTSC-CEEEEEE---CCTTTCTTT-SSSSCCCCTTHH--HHHHHHHHCC-BTTE
T ss_pred ----cC--CCHHHHHHHHHHHHH-hcCCCC-CceEEEE---eEcCCCCCC-CCCccCcCCCcc--hhhHHHHhCc-CCCE
Confidence 11 123445678899997 777632 2222211 123222111 233211222211 0112333444 7899
Q ss_pred EEecCCccC--CCCcccccccccccccccc
Q psy10545 1171 YFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1171 y~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
||||+++.+ +++|+||+.||..+|..|.
T Consensus 453 ~fAGe~t~~~~~g~veGAi~SG~raA~~i~ 482 (495)
T 2vvm_A 453 VFANSDWALGWRSFIDGAIEEGTRAARVVL 482 (495)
T ss_dssp EECCGGGCSSSTTSHHHHHHHHHHHHHHHH
T ss_pred EEechhhhcCCceEEEhHHHHHHHHHHHHH
Confidence 999999864 3579999999999998874
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.95 E-value=6.1e-28 Score=302.13 Aligned_cols=426 Identities=17% Similarity=0.175 Sum_probs=264.6
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhcccccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNRMENYV 788 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~~l 788 (1428)
.++||+|||||++||+||+.|+++|++|+|+|+++++||+++|...+|+.+|.|++++.. ...+.++++++|+.. ..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~--~~ 89 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLRE--KQ 89 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGG--GE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCcc--cc
Confidence 358999999999999999999999999999999999999999999999999999999975 356788999999642 22
Q ss_pred eEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHH
Q psy10545 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLI 868 (1428)
Q Consensus 789 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (1428)
.+. ......+.+.+|+.+.++.+...+... ... .....+ +.... .+....... ..
T Consensus 90 ~~~-~~~~~~~~~~~g~~~~~p~~~~~~~~~--~~~-~~~~~~-------~~~~~----~~~~~~~~~--------~~-- 144 (504)
T 1sez_A 90 QFP-LSQNKRYIARNGTPVLLPSNPIDLIKS--NFL-STGSKL-------QMLLE----PILWKNKKL--------SQ-- 144 (504)
T ss_dssp ECC-SSCCCEEEESSSSEEECCSSHHHHHHS--SSS-CHHHHH-------HHHTH----HHHC-----------------
T ss_pred eec-cCCCceEEEECCeEEECCCCHHHHhcc--ccC-CHHHHH-------HHhHh----hhccCcccc--------cc--
Confidence 221 122335567788888877765433211 000 000001 00000 010000000 00
Q ss_pred hhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhHHH--HHHHHh----------------c-----------
Q psy10545 869 KIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSSIY--TLIHAL----------------E----------- 918 (1428)
Q Consensus 869 ~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~~~--~~~~~~----------------~----------- 918 (1428)
......|+.+|+.+++.++.++.++.. ....++.+|.+.++.. ..+..+ .
T Consensus 145 ~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 224 (504)
T 1sez_A 145 VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPK 224 (504)
T ss_dssp ---CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------C
T ss_pred cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccc
Confidence 012368999999999888888877763 3455677777765421 111110 0
Q ss_pred ------cccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeE-----EEEEec--CC---cEEEcCEEEE
Q psy10545 919 ------YEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKV-----NKVHLK--NG---QIFDADIIVS 982 (1428)
Q Consensus 919 ------~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v-----~~V~~~--~G---~~i~ad~VV~ 982 (1428)
...+.++++||++.|+++|++.+.+ ++|++|++|++|..++++. +.|++. +| +++.||+||+
T Consensus 225 ~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~ 302 (504)
T 1sez_A 225 TSANKKRQRGSFSFLGGMQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIM 302 (504)
T ss_dssp CCSCCSTTCSCBEETTCTHHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEE
T ss_pred hhhccccCCceEeeCcHHHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEE
Confidence 0124678999999999999876532 7899999999999987762 566654 46 5789999999
Q ss_pred cCCHHHHHHHhcC---CCCCChhHHHHHhhcCCCCceEEEEEeecCCc-C-CCcceEEEcCCChHHHHHHHhcCCCCCCC
Q psy10545 983 NADIINTYRNLLG---QYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQY-T-HLAHHTIFFPSNYKKSIENIFGKNFSRDN 1057 (1428)
Q Consensus 983 A~~~~~~~~~Ll~---~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1428)
|+|+..+.+ ++. ..++++. .+.++.+. ++.++++.+++++ + ++..+.++++ +.+. ..+ .
T Consensus 303 a~p~~~l~~-ll~~~~~~~~~~~---~l~~~~~~-~~~~v~l~~~~~~~~~~~~~~~~l~~-~~~~------~~g----~ 366 (504)
T 1sez_A 303 TAPLCDVKS-MKIAKRGNPFLLN---FIPEVDYV-PLSVVITTFKRENVKYPLEGFGVLVP-SKEQ------QHG----L 366 (504)
T ss_dssp CSCHHHHHT-SEEESSSSBCCCT---TSCCCCEE-EEEEEEEEEEGGGBSSCCCSSEEECC-GGGG------GGT----C
T ss_pred CCCHHHHHH-HhhcccCCcccHH---HHhcCCCC-ceEEEEEEEchhhcCCCCCceEEEcC-CCCC------CCC----C
Confidence 999887775 552 1223322 25566665 6889999999883 3 2333455453 2221 001 1
Q ss_pred ceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCCCCc-HHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHH
Q psy10545 1058 LSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSSINW-SEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKD 1136 (1428)
Q Consensus 1058 ~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~~~~-~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~ 1136 (1428)
+...+.+++..+|..+|+|+.++++++..+.. ..| ..+++++++.++++|++ ++|.-. ......+. .|..
T Consensus 367 ~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~----~~~~~~~~ee~~~~v~~~L~~-~~g~~~-~p~~~~~~---~w~~ 437 (504)
T 1sez_A 367 KTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRN----RELAKASRTELKEIVTSDLKQ-LLGAEG-EPTYVNHL---YWSK 437 (504)
T ss_dssp CSSEEEEHHHHCGGGSCTTEEEEEEEEESTTC----GGGTTCCHHHHHHHHHHHHHH-HHCBCS-CCSSEEEE---EEEE
T ss_pred ccceEEeeccccCCcCCCCCEEEEEEeCCCCc----ccccCCCHHHHHHHHHHHHHH-HhCCCC-CCeEEEEe---ECCC
Confidence 12223444556677788888777777654322 123 23568899999999998 665321 11111110 1111
Q ss_pred HhCCCCCcccccccccccccccCCCCCCCCCCceEEecCCccCCCCcccccccccccccccc
Q psy10545 1137 VLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1137 ~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
.+..+.+. ....... . +...++ ++||||||+++. |.|++||+.||+.+|+.|.
T Consensus 438 ~~p~~~~g---~~~~~~~---~-~~~~~~-~~~l~~aG~~~~-g~~v~gai~sG~~aA~~il 490 (504)
T 1sez_A 438 AFPLYGHN---YDSVLDA---I-DKMEKN-LPGLFYAGNHRG-GLSVGKALSSGCNAADLVI 490 (504)
T ss_dssp EEECCCTT---HHHHHHH---H-HHHHHH-STTEEECCSSSS-CSSHHHHHHHHHHHHHHHH
T ss_pred CCCccCcC---HHHHHHH---H-HHHHHh-CCCEEEEeecCC-CCCHHHHHHHHHHHHHHHH
Confidence 00111111 0000000 0 011233 789999999997 7899999999999998875
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.95 E-value=2.6e-27 Score=293.96 Aligned_cols=422 Identities=15% Similarity=0.126 Sum_probs=257.9
Q ss_pred cceeeecCCCcchHHHHHHHHhCC------CeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhccc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAG------ISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNR 783 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G------~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~ 783 (1428)
++||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++.. ...+.++++++|++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCCc
Confidence 589999999999999999999999 99999999999999999999999999999998764 44577899999864
Q ss_pred ccccceEEecCCceEEEeCCCcEEEecCCHH-HHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHH
Q psy10545 784 MENYVNLLPIKPFYRLYWGKEKFLNYEDNIK-DLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLF 862 (1428)
Q Consensus 784 l~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (1428)
..+ ........+.+.+|....++.+.. .....+..+.. ..+...........+. +. +.
T Consensus 85 --~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~----~~--~~-------- 143 (470)
T 3i6d_A 85 --HLL--VNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVS---TGLFSLSGKARAAMDF----IL--PA-------- 143 (470)
T ss_dssp --TTE--EECCCCCEEEECSSCEEECCC------------------------CCSHHHHHHH----HS--CC--------
T ss_pred --cee--ecCCCCccEEEECCEEEECCCCcccCCcCchHHhhc---cCcCCHHHHHHHhcCc----cc--CC--------
Confidence 222 121122344556666666553210 00000000000 0000000000000000 00 00
Q ss_pred hhHHHHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhHHHHHHHH----------h--------------
Q psy10545 863 ILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSSIYTLIHA----------L-------------- 917 (1428)
Q Consensus 863 ~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~~~~~~~~----------~-------------- 917 (1428)
.......++.+|+.+.+..+..+.++.. ....++.++.+.+....+-.+ .
T Consensus 144 -----~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (470)
T 3i6d_A 144 -----SKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQ 218 (470)
T ss_dssp -----CSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------------
T ss_pred -----CCCCCCcCHHHHHHHhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcccccccc
Confidence 0012467899999988877777766653 344556677766542211000 0
Q ss_pred ---ccccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhc
Q psy10545 918 ---EYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLL 994 (1428)
Q Consensus 918 ---~~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll 994 (1428)
......+++++|++.+++.|++.+.+ ++|++|++|++|..++++ +.|++.+|+++.||+||+|+|+..+.+ ++
T Consensus 219 ~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~-l~ 294 (470)
T 3i6d_A 219 LTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-YSLELDNGVTLDADSVIVTAPHKAAAG-ML 294 (470)
T ss_dssp --------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECSSS-EEEEESSSCEEEESEEEECSCHHHHHH-HT
T ss_pred ccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-EEEEECCCCEEECCEEEECCCHHHHHH-Hc
Confidence 00124568899999999999887754 799999999999998877 678899998999999999998887765 66
Q ss_pred CCCCCChhHHHHHhhcCCCCceEEEEEeecCCcCCC--cceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCC
Q psy10545 995 GQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHL--AHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSL 1072 (1428)
Q Consensus 995 ~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ 1072 (1428)
.+++ ..+.++++.+. ++.++++.+++++.+. .....+++.+ ...+...+++.+...+..
T Consensus 295 ~~~~----~~~~~~~~~~~-~~~~v~l~~~~~~~~~~~~~~g~l~~~~--------------~~~~~~~~~~~s~~~~~~ 355 (470)
T 3i6d_A 295 SELP----AISHLKNMHST-SVANVALGFPEGSVQMEHEGTGFVISRN--------------SDFAITACTWTNKKWPHA 355 (470)
T ss_dssp TTST----THHHHHTCEEE-EEEEEEEEESSTTCCCSSCSSEEEECST--------------TCCSEEEEEEHHHHCGGG
T ss_pred CCch----hhHHHhcCCCC-ceEEEEEEECchhcCCCCCCeEEEccCC--------------CCCCceEEEEEcCcCCCc
Confidence 5442 24678888887 6889999999984221 1122222211 011223344444444566
Q ss_pred CCCCccEEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCccccccccc
Q psy10545 1073 APTGCSTFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLL 1152 (1428)
Q Consensus 1073 ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~ 1152 (1428)
.|+|+.++.+++..+... .....+++++.+.++++|++ ++|... ......+. .|. .+...+.++.
T Consensus 356 ~p~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~-~~g~~~-~p~~~~~~---~w~-------~a~p~~~~g~ 420 (470)
T 3i6d_A 356 APEGKTLLRAYVGKAGDE---SIVDLSDNDIINIVLEDLKK-VMNING-EPEMTCVT---RWH-------ESMPQYHVGH 420 (470)
T ss_dssp SCTTCEEEEEEECCSSCC---GGGTSCHHHHHHHHHHHHGG-GSCCCS-CCSEEEEE---EEE-------EEEEECBTTH
T ss_pred CCCCCEEEEEEECCCCCc---cccCCCHHHHHHHHHHHHHH-HhCCCC-CceEEEEE---EcC-------CccCCCCCCH
Confidence 788877777766332211 11234568899999999998 776432 22211110 010 1111111111
Q ss_pred c-cccccCCCCCCCCCCceEEecCCccCCCCcccccccccccccccc
Q psy10545 1153 T-QSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1153 ~-q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
. .....++....+ .+|||+||+++. |.|++||+.||+.+|+.|.
T Consensus 421 ~~~~~~~~~~l~~~-~~~l~~aG~~~~-g~gv~~a~~sG~~aA~~i~ 465 (470)
T 3i6d_A 421 KQRIKELREALASA-YPGVYMTGASFE-GVGIPDCIDQGKAAVSDAL 465 (470)
T ss_dssp HHHHHHHHHHHHHH-STTEEECSTTTS-CCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-CCCEEEEeecCC-CCCHHHHHHHHHHHHHHHH
Confidence 0 000111212233 689999999986 7789999999999998874
No 14
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=288.36 Aligned_cols=424 Identities=15% Similarity=0.111 Sum_probs=259.1
Q ss_pred cceeeecCCCcchHHHHHHHHhCCC--eEEEEccCCCCCCcceEEEe-CCeEEcccccccCC----chHHHHHHHHhccc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGI--STIILEQRDKPGGRAYVYKQ-DGFIFDAGPTVITD----PNSIKLLFDLSKNR 783 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~--~V~VlEa~~~~GGr~~s~~~-~G~~~d~G~~~i~~----~~~~~~l~~~lG~~ 783 (1428)
++||+|||||++||+||++|+++|+ +|+|||+++++||++++... +|+.+|.|++++.. ...+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4699999999999999999999999 99999999999999999876 59999999999864 23467888999853
Q ss_pred ccccceEEec-CC--ceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHH
Q psy10545 784 MENYVNLLPI-KP--FYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDM 860 (1428)
Q Consensus 784 l~~~l~~~~~-~~--~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1428)
+.+..... .+ ...+.+.+|+.+.++.+...+...+..+.... . .. .. ..+.. +.
T Consensus 82 --~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~---~---~~----~~----~~~~~-~~------ 138 (477)
T 3nks_A 82 --SEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPL---F---WA----GL----RELTK-PR------ 138 (477)
T ss_dssp --GGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCS---S---HH----HH----TTTTS-CC------
T ss_pred --ceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhHH---H---HH----HH----Hhhhc-CC------
Confidence 22222111 11 12345566777776654322111100000000 0 00 00 00000 00
Q ss_pred HHhhHHHHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhHHHH--HHHHh--------------------
Q psy10545 861 LFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSSIYT--LIHAL-------------------- 917 (1428)
Q Consensus 861 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~~~~--~~~~~-------------------- 917 (1428)
......++.+|+.+.+..+....++.. ....++.++.+.+.... .+...
T Consensus 139 --------~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~ 210 (477)
T 3nks_A 139 --------GKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ 210 (477)
T ss_dssp --------CCSSCCBHHHHHHHHHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----C
T ss_pred --------CCCCCcCHHHHHHHhhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccC
Confidence 012367889999988877777666653 34556777777665221 11110
Q ss_pred ----------ccccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 918 ----------EYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 918 ----------~~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
....+.++++||++.++++|++.+++.|++|++|++|++|..++++++.|++. |.++.||+||+|+|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 211 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPAS 289 (477)
T ss_dssp CCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHH
T ss_pred CchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHH
Confidence 11235689999999999999999999999999999999999887665677764 5589999999999888
Q ss_pred HHHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCC
Q psy10545 988 NTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSV 1067 (1428)
Q Consensus 988 ~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~ 1067 (1428)
.+.+ ++++. ++...+.+.++.+. ++.++++.+++++.+......+++.+ ...+.+.+.+.+.
T Consensus 290 ~~~~-ll~~~--~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~~~g~l~~~~--------------~~~~~~~~~~~s~ 351 (477)
T 3nks_A 290 VLSE-LLPAE--AAPLARALSAITAV-SVAVVNLQYQGAHLPVQGFGHLVPSS--------------EDPGVLGIVYDSV 351 (477)
T ss_dssp HHHH-HSCGG--GHHHHHHHHTCCEE-EEEEEEEEETTCCCSSCSSEEECCTT--------------TCSSEEEEECHHH
T ss_pred HHHH-hcccc--CHHHHHHHhcCCCC-cEEEEEEEECCCCCCCCCceEEccCC--------------CCCCceEEEEecc
Confidence 7765 66542 34566788888887 67899999998842222222222211 0122344445444
Q ss_pred CCCCCC-CCCccEEEEEEecCCCCC-CCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEe-cCcccHHHHhCCCCCc
Q psy10545 1068 TDLSLA-PTGCSTFYALIPVPNLSN-SSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRI-FTPNDFKDVLGSYLGS 1144 (1428)
Q Consensus 1068 ~d~s~a-p~G~~~l~v~~~~p~~~~-~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~-~tp~~~~~~~~~~~G~ 1144 (1428)
..|... |+|...+.+++....... ....|+.+++++++.++++|++ .++ +........+ ..+. +
T Consensus 352 ~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g-~~~~~~~~~v~rw~~-----------a 418 (477)
T 3nks_A 352 AFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAAT-QLG-LKEMPSHCLVHLHKN-----------C 418 (477)
T ss_dssp HCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHH-HHC-CCSCCSEEEEEEEEE-----------E
T ss_pred ccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHH-HhC-CCCCCcEEEEEEcCC-----------c
Confidence 444432 347777777764311100 0001222568899999999998 543 2222221111 0111 1
Q ss_pred cccccccccc-ccccCCCCCCCCCCceEEecCCccCCCCccccccccccccccccc
Q psy10545 1145 AFSFAPLLTQ-SAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIKL 1199 (1428)
Q Consensus 1145 ~~g~~~~~~q-~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~~ 1199 (1428)
...+.++... ....+..... ..+|||+||+|. .|.||++|+.||+.+|+.|..
T Consensus 419 ~p~~~~g~~~~~~~~~~~l~~-~~~~l~l~G~~~-~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 419 IPQYTLGHWQKLESARQFLTA-HRLPLTLAGASY-EGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp EECCBTTHHHHHHHHHHHHHH-TTCSEEECSTTT-SCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHh-cCCCEEEEccCC-CCCcHHHHHHHHHHHHHHHHh
Confidence 1111111100 0000000001 136899999997 488999999999999998753
No 15
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.94 E-value=4e-26 Score=283.35 Aligned_cols=420 Identities=15% Similarity=0.113 Sum_probs=258.6
Q ss_pred cccceeeecCCCcchHHHHHHHHhCC--CeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhccccc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAG--ISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNRME 785 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G--~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~ 785 (1428)
|.++||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++.. ...+.++++++|++.
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~- 80 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGE- 80 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGG-
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcc-
Confidence 34689999999999999999999999 99999999999999999999999999999998764 456788999998642
Q ss_pred ccceEEecCCceEEEeCCCcEEEecCCHH----HHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHH
Q psy10545 786 NYVNLLPIKPFYRLYWGKEKFLNYEDNIK----DLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDML 861 (1428)
Q Consensus 786 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (1428)
. .........+.+.+|+...++.+.. .....+.+...... ..++ ........ . ..+.
T Consensus 81 -~--~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~--~~~~--~~~~~~~~----~-~~~~------- 141 (475)
T 3lov_A 81 -K--LVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTE--EEKQ--EVADLLLH----P-SDSL------- 141 (475)
T ss_dssp -G--EEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCH--HHHH--HHHHHHHS----C-CTTC-------
T ss_pred -e--EeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCCh--hHHH--HhhCcccC----C-cccc-------
Confidence 1 2222222334455666666543210 00000000000000 0000 00000000 0 0000
Q ss_pred HhhHHHHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhHH--HHH-----------HHHh---c------
Q psy10545 862 FILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSSI--YTL-----------IHAL---E------ 918 (1428)
Q Consensus 862 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~~--~~~-----------~~~~---~------ 918 (1428)
.......++.+|+.+.+..+..+.++.. ....++.++.+.+.. +.. ...+ .
T Consensus 142 ------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 215 (475)
T 3lov_A 142 ------RIPEQDIPLGEYLRPRLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLP 215 (475)
T ss_dssp ------CCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC-----
T ss_pred ------cCCCCCcCHHHHHHHHhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhccccccc
Confidence 0012367899999988877777776653 345566776665431 110 0000 0
Q ss_pred --------cccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHH
Q psy10545 919 --------YEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTY 990 (1428)
Q Consensus 919 --------~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~ 990 (1428)
.....++++||++.+++.|++.+.+ ++|++|++|++|..++++ +.|++.+| ++.||+||+|+|++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~ 291 (475)
T 3lov_A 216 QTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISREDGR-YRLKTDHG-PEYADYVLLTIPHPQVV 291 (475)
T ss_dssp ---------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEETTE-EEEECTTC-CEEESEEEECSCHHHHH
T ss_pred ccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE-EEEEECCC-eEECCEEEECCCHHHHH
Confidence 0234568999999999999988754 799999999999999887 66888899 89999999999888776
Q ss_pred HHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCcCCCc--ceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCC
Q psy10545 991 RNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHLA--HHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVT 1068 (1428)
Q Consensus 991 ~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~ 1068 (1428)
+ ++.++++ +.+.++.+. ++.++++.+++++ +.+ ...++++.+ .......+++.+..
T Consensus 292 ~-ll~~~~~-----~~~~~~~~~-~~~~v~l~~~~~~-~~~~~g~g~l~~~~--------------~~~~~~~~~~~s~~ 349 (475)
T 3lov_A 292 Q-LLPDAHL-----PELEQLTTH-STATVTMIFDQQQ-SLPIEGTGFVVNRR--------------APYSITACTAIDQK 349 (475)
T ss_dssp H-HCTTSCC-----HHHHTCCEE-EEEEEEEEEECCS-SCSSSSSEEEECTT--------------SSCSEEEEEEHHHH
T ss_pred H-HcCccCH-----HHHhcCCCC-eEEEEEEEECCcC-CCCCCCEEEEecCC--------------CCCceEEEEEEccc
Confidence 6 6665432 567888887 6889999999986 322 112222211 01123344555555
Q ss_pred CCCCCCCCccEEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCccccc
Q psy10545 1069 DLSLAPTGCSTFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSF 1148 (1428)
Q Consensus 1069 d~s~ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~ 1148 (1428)
.+...|+ ...+.+++..+... ...+.+++++.+.++++|++ .++.- .......+. .|.. +...+
T Consensus 350 ~~~~~p~-~~~l~~~~~~~~~~---~~~~~~~e~~~~~~~~~L~~-~~g~~-~~p~~~~v~---~w~~-------a~p~~ 413 (475)
T 3lov_A 350 WNHSAPD-HTVLRAFVGRPGND---HLVHESDEVLQQAVLQDLEK-ICGRT-LEPKQVIIS---RLMD-------GLPAY 413 (475)
T ss_dssp CTTTCTT-EEEEEEEECBTTBC---GGGGSCHHHHHHHHHHHHHH-HHSSC-CCCSEEEEE---EEEE-------EEECC
T ss_pred CCCCCCC-cEEEEEEeCCCCCC---cccCCCHHHHHHHHHHHHHH-HhCCC-CCCeEEEEE---Eccc-------CCCCC
Confidence 5666776 55566665332211 12234568899999999998 66432 122111110 0110 00111
Q ss_pred ccccc-cccccCCCCCCCCCCceEEecCCccCCCCcccccccccccccccc
Q psy10545 1149 APLLT-QSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1149 ~~~~~-q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
.++.. .....++...++ ++||||||+++. |.||+||+.||+.+|+.|.
T Consensus 414 ~~g~~~~~~~~~~~l~~~-~~~l~~aG~~~~-g~g~~~a~~sG~~aA~~i~ 462 (475)
T 3lov_A 414 TVGHADRIQRVREEVLAQ-YPGIYLAGLAYD-GVGLPDCVASAKTMIESIE 462 (475)
T ss_dssp CTTHHHHHHHHHHHHHHH-STTEEECSTTTS-CSSHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHhh-CCCEEEEccCCC-CCCHHHHHHHHHHHHHHHH
Confidence 11100 000011212223 689999999987 6789999999999999885
No 16
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.94 E-value=9.2e-26 Score=274.99 Aligned_cols=389 Identities=15% Similarity=0.179 Sum_probs=261.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEE-----e----------------CCeEEcccccccC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYK-----Q----------------DGFIFDAGPTVIT 768 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~-----~----------------~G~~~d~G~~~i~ 768 (1428)
.++||+|||||++||+||+.|+++|++|+|+|+++++||+++|++ . .++.+|.|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 358999999999999999999999999999999999999999998 1 4578899999887
Q ss_pred CchHHHHHHHHhcccccccceEEecCCceEEEeCCCcEEEecCCH-HHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhh
Q psy10545 769 DPNSIKLLFDLSKNRMENYVNLLPIKPFYRLYWGKEKFLNYEDNI-KDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYL 847 (1428)
Q Consensus 769 ~~~~~~~l~~~lG~~l~~~l~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~ 847 (1428)
.++.+.++++++|+ .+++++.+.++.+ .+.+|+.+.++.+. +.+...+...+ +...+.+|+..+... ..
T Consensus 85 ~~~~l~~ll~~lgl--~~~l~~~~~~~~~--~~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~-~~--- 154 (433)
T 1d5t_A 85 ANGQLVKMLLYTEV--TRYLDFKVVEGSF--VYKGGKIYKVPSTETEALASNLMGMF--EKRRFRKFLVFVANF-DE--- 154 (433)
T ss_dssp TTSHHHHHHHHHTG--GGGCCEEECCEEE--EEETTEEEECCCSHHHHHHCSSSCHH--HHHHHHHHHHHHHHC-CT---
T ss_pred ccchHHHHHHHcCC--ccceEEEEeCceE--EeeCCEEEECCCCHHHHhhCcccChh--hHHHHHHHHHHHHhh-cc---
Confidence 77778899999994 4557777766433 46688888888874 33333222221 334555555544431 10
Q ss_pred hhcccCcccHHHHHHhhHHHHhhcccCCHHHHHHhhcCCHHHHHHHHhh-cccccCCCCchhH---HHHHHHHhcc--cc
Q psy10545 848 SFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFN-SLFIGGNPFSTSS---IYTLIHALEY--EW 921 (1428)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~-~~~~g~~p~~~s~---~~~~~~~~~~--~~ 921 (1428)
..+.. . ...+ ....++.+|+++++.++.++.++... ..+.+..+.+.++ +..+..+... ..
T Consensus 155 ---~~p~~-~--------~~~~-~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~ 221 (433)
T 1d5t_A 155 ---NDPKT-F--------EGVD-PQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY 221 (433)
T ss_dssp ---TCGGG-G--------TTCC-TTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS
T ss_pred ---cCchh-c--------cccc-cccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc
Confidence 00100 0 0001 13689999999999999999987654 3444444443332 2333333321 12
Q ss_pred c---eeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCC
Q psy10545 922 G---IWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYA 998 (1428)
Q Consensus 922 g---~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~ 998 (1428)
| .++++||++.++++|++.+++.|++|++|++|++|..+++++++|++ +|+++.||+||+|++++.. .+
T Consensus 222 g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~---~~---- 293 (433)
T 1d5t_A 222 GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYVPD---RV---- 293 (433)
T ss_dssp SCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGCGG---GE----
T ss_pred CCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCCcc---cc----
Confidence 2 66999999999999999999999999999999999999999887775 7889999999999977631 11
Q ss_pred CChhHHHHHhhcCCCCceEEEEEeecCCcCCC---cceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCC
Q psy10545 999 FGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHL---AHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPT 1075 (1428)
Q Consensus 999 ~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~ 1075 (1428)
.++....+.+. .+++++|.. .+++++++. +.++.++.++++.+| .||+++|+
T Consensus 294 ---------~~~~~~~~~~~---il~~~~~~~~~~~~~~i~~~~------------~~~~~~~~~~v~~~s-~d~~~aP~ 348 (433)
T 1d5t_A 294 ---------RKAGQVIRIIC---ILSHPIKNTNDANSCQIIIPQ------------NQVNRKSDIYVCMIS-YAHNVAAQ 348 (433)
T ss_dssp ---------EEEEEEEEEEE---EESSCCTTSTTCSSEEEEECG------------GGTTCSSCEEEEEEE-GGGTSSCT
T ss_pred ---------cccCcceeEEE---EEcCcccccCCCceEEEEeCc------------cccCCCCCEEEEEEC-CCCcccCC
Confidence 11111222222 278777654 567777742 235678899999999 89999999
Q ss_pred CccEEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccc
Q psy10545 1076 GCSTFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQS 1155 (1428)
Q Consensus 1076 G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~ 1155 (1428)
|++++++++++|... .. +++...++. +.|.....+...+..
T Consensus 349 G~~~~~~~~~~p~~~--------~~----~~l~~~~~~-l~~~~~~~~~~~~~~-------------------------- 389 (433)
T 1d5t_A 349 GKYIAIASTTVETTD--------PE----KEVEPALGL-LEPIDQKFVAISDLY-------------------------- 389 (433)
T ss_dssp TCEEEEEEEECCSSC--------HH----HHTHHHHTT-TCSCSEEEEEEEEEE--------------------------
T ss_pred CCEEEEEEEecCCCC--------HH----HHHHHHHHH-hhhHHhheeccceee--------------------------
Confidence 999999999886432 11 233344554 445433211111111
Q ss_pred cccCCCCCCCCCCceEEecCCccCCCCcccccccccccccccc
Q psy10545 1156 AWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1156 ~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
.|.... .-+|+|+++++-. +...++++..++.....|.
T Consensus 390 ---~~~~~~-~~~~~~~~~~~d~-~~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 390 ---EPIDDG-SESQVFCSCSYDA-TTHFETTCNDIKDIYKRMA 427 (433)
T ss_dssp ---EESCCS-TTTCEEECCCCCS-CSBSHHHHHHHHHHHHHHH
T ss_pred ---eecCCC-CCCCEEECCCCCc-cccHHHHHHHHHHHHHHHh
Confidence 111111 1489999997754 3346888887777666553
No 17
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.93 E-value=3.2e-26 Score=286.56 Aligned_cols=276 Identities=19% Similarity=0.199 Sum_probs=172.9
Q ss_pred cccceeeecCCCcchHHHHHHHHhCC-CeEEEEccCCCCCCcceEEEe-CCeEEcccccccCC--chHHHHHHHHhcccc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAG-ISTIILEQRDKPGGRAYVYKQ-DGFIFDAGPTVITD--PNSIKLLFDLSKNRM 784 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G-~~V~VlEa~~~~GGr~~s~~~-~G~~~d~G~~~i~~--~~~~~~l~~~lG~~l 784 (1428)
+.++||||||||++||+||+.|+++| ++|+|||+++++|||+.|.+. +|+.+|.|+++++. .+.+..++.++|...
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~ 85 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLND 85 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCC
Confidence 45689999999999999999999999 999999999999999999987 79999999999874 344555666666421
Q ss_pred cccceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhh
Q psy10545 785 ENYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFIL 864 (1428)
Q Consensus 785 ~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (1428)
.. ....+.++..+.++.+... ........+..+.+.+.......+.....
T Consensus 86 ~~----------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 135 (516)
T 1rsg_A 86 GR----------TRFVFDDDNFIYIDEERGR-------VDHDKELLLEIVDNEMSKFAELEFHQHLG------------- 135 (516)
T ss_dssp CC----------CCEECCCCCCEEEETTTEE-------CTTCTTTCHHHHHHHHHHHHHHHC------------------
T ss_pred cc----------eeEEECCCCEEEEcCCCcc-------ccccHHHHHHHHHHHHHHHHHHHhhhccC-------------
Confidence 10 0112223332222221000 00000111122222222222111100000
Q ss_pred HHHHhhcccCCHHHHHHhhcC------CH----HHHHHHHhhcccccCCCCchhHHHHHHHHhccccceeeecCchHHHH
Q psy10545 865 PKLIKIKAWKSVYSIVSQFIK------ND----YLKQAFSFNSLFIGGNPFSTSSIYTLIHALEYEWGIWFPKGGVGALI 934 (1428)
Q Consensus 865 ~~~~~~~~~~s~~~~l~~~~~------~~----~l~~~l~~~~~~~g~~p~~~s~~~~~~~~~~~~~g~~~~~gG~~~l~ 934 (1428)
..+.++.+++.+++. .+ .+..++.......|..+...++.+.+. ...+...+++| ++.++
T Consensus 136 ------~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~---~~~~~~~~~~g-~~~l~ 205 (516)
T 1rsg_A 136 ------VSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYF---GHQGRNAFALN-YDSVV 205 (516)
T ss_dssp --------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCC---CCSSCCEEESC-HHHHH
T ss_pred ------CCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCChHHCChHHHHh---hccCcchhhhC-HHHHH
Confidence 113455555443221 11 112233222233455666666543221 12223456677 99999
Q ss_pred HHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHH----------hcCCCCCChhHH
Q psy10545 935 KALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRN----------LLGQYAFGKKKY 1004 (1428)
Q Consensus 935 ~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~----------Ll~~~~~p~~~~ 1004 (1428)
+.|++.+.+ ++|++|++|++|..+++..+.|++.+|+++.||+||+|+|+..+... +.-.+++|..+.
T Consensus 206 ~~l~~~l~~--~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~ 283 (516)
T 1rsg_A 206 QRIAQSFPQ--NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQ 283 (516)
T ss_dssp HHHHTTSCG--GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHH
T ss_pred HHHHHhCCC--CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHH
Confidence 999887753 67999999999998744347889999989999999999988876532 112356889999
Q ss_pred HHHhhcCCCCceEEEEEeecCCc
Q psy10545 1005 MNLIKKKMSNSLFVIYFGLSEQY 1027 (1428)
Q Consensus 1005 ~~l~~~~~~~s~~~v~l~~~~~~ 1027 (1428)
++++++.++ +..||++.|+++|
T Consensus 284 ~ai~~~~~~-~~~Kv~l~f~~~f 305 (516)
T 1rsg_A 284 DAFDKIHFG-ALGKVIFEFEECC 305 (516)
T ss_dssp HHTTSSCCC-CCEEEEEEESSCC
T ss_pred HHHHhCCCC-cceEEEEEeCCCC
Confidence 999999998 6789999999994
No 18
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.92 E-value=8.4e-26 Score=283.65 Aligned_cols=436 Identities=12% Similarity=0.054 Sum_probs=245.6
Q ss_pred ccccceeeecCCCcchHHHHHHHHh-CCCeEEEEccCCCCCCcceEEE-eCCeEEcccccccCC-chHHHHHHHHhcccc
Q psy10545 708 SFFDKIRIFSGAGIGGIALAIRLQT-AGISTIILEQRDKPGGRAYVYK-QDGFIFDAGPTVITD-PNSIKLLFDLSKNRM 784 (1428)
Q Consensus 708 ~~~~~dViIIGaGiaGLsAA~~La~-~G~~V~VlEa~~~~GGr~~s~~-~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l 784 (1428)
+..++||||||||++||+||++|++ .|++|+|||+++++||+++|.. .+|+.+|.|+|++.. ...+.+++++++...
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKE 86 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCcc
Confidence 3456899999999999999999998 5999999999999999999964 589999999999975 456678888876432
Q ss_pred cccceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHH-HHHHHHhhhhhcccCcccHHHHHHh
Q psy10545 785 ENYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYS-KKVFKEGYLSFASKSFLTINDMLFI 863 (1428)
Q Consensus 785 ~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (1428)
. .+...+.... .+.+|+.+.++.... +.... ........... ......
T Consensus 87 ~---~~~~~~~~~~-i~~~g~~~~~p~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~------------------- 135 (513)
T 4gde_A 87 D---DWYTHQRISY-VRCQGQWVPYPFQNN-----ISMLP---KEEQVKCIDGMIDAALEA------------------- 135 (513)
T ss_dssp G---GEEEEECCEE-EEETTEEEESSGGGG-----GGGSC---HHHHHHHHHHHHHHHHHH-------------------
T ss_pred c---eeEEecCceE-EEECCeEeecchhhh-----hhhcc---hhhHHHHHHHHHHHHHhh-------------------
Confidence 2 2333333333 344677777653210 11111 00000111000 000000
Q ss_pred hHHHHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhH---------------HHHHHHHh-cc-----cc
Q psy10545 864 LPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSS---------------IYTLIHAL-EY-----EW 921 (1428)
Q Consensus 864 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~---------------~~~~~~~~-~~-----~~ 921 (1428)
........++.+|+.+.+.....+.++.. ....++.++.+.+. ....+... .. ..
T Consensus 136 ---~~~~~~~~s~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (513)
T 4gde_A 136 ---RVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNAT 212 (513)
T ss_dssp ---HTCCSCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBE
T ss_pred ---hcccccccCHHHHHHHhhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccc
Confidence 00011245666776666555544444432 22333444333221 11111100 00 01
Q ss_pred ceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCCh
Q psy10545 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGK 1001 (1428)
Q Consensus 922 g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~ 1001 (1428)
..+.++||++.++++|++.+++.|++|++|++|++|..++++ |++.+|+++.||+||+|+|+..+.. ++.+ .
T Consensus 213 ~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~~~G~~~~ad~vI~t~P~~~l~~-~l~~----~ 284 (513)
T 4gde_A 213 FRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTLQDGTTIGYKKLVSTMAVDFLAE-AMND----Q 284 (513)
T ss_dssp EEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEETTSCEEEEEEEEECSCHHHHHH-HTTC----H
T ss_pred eeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEEcCCCEEECCEEEECCCHHHHHH-hcCc----h
Confidence 123458999999999999999999999999999999988775 5678999999999999999888876 5543 2
Q ss_pred hHHHHHhhcCCCCceEEEEEeecCCcC-C-CcceEEEcCCChHHHHHHH-----hcCCCCC--CCceEEEEeCCCCCCCC
Q psy10545 1002 KKYMNLIKKKMSNSLFVIYFGLSEQYT-H-LAHHTIFFPSNYKKSIENI-----FGKNFSR--DNLSIYLHSPSVTDLSL 1072 (1428)
Q Consensus 1002 ~~~~~l~~~~~~~s~~~v~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~v~~~s~~d~s~ 1072 (1428)
........+.|. ++..|+++++...+ . .+.++++++++ +..+..+ |.....| ......+.+.+...+..
T Consensus 285 ~~~~~~~~l~y~-~~~~v~l~~~~~~~~~~~~~~~~y~~~~-~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~ 362 (513)
T 4gde_A 285 ELVGLTKQLFYS-STHVIGVGVRGSRPERIGDKCWLYFPED-NCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQS 362 (513)
T ss_dssp HHHHHHTTCCEE-EEEEEEEEEESSCCTTTTTCCEEECCST-TCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSC
T ss_pred hhHhhhhcccCC-ceEEEEEEEeccccccccccceeeccCC-CCceeEEEecCCCCcccCCCCCceEEEEEeccCCCccc
Confidence 344566778877 67888999987743 2 23345555321 1000000 0000001 11112233333344444
Q ss_pred CCCCccEEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEec-CcccHHHHhCCCCCcccccccc
Q psy10545 1073 APTGCSTFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIF-TPNDFKDVLGSYLGSAFSFAPL 1151 (1428)
Q Consensus 1073 ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~-tp~~~~~~~~~~~G~~~g~~~~ 1151 (1428)
.+.+...+..+...... ...|..+++++++.++++|.++....-.+.++...+. .|..+ +.+. .+....
T Consensus 363 ~~~~~~~~~~~~~~~~~---~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ay----P~y~---~~~~~~ 432 (513)
T 4gde_A 363 TEAKEGPYWSIMLEVSE---SSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGY----PTPT---LEREGT 432 (513)
T ss_dssp CSEECCCEEEEEEEEEE---BTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEE----ECCB---TTHHHH
T ss_pred ccCCcceEEEEEecccc---hhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCee----cccC---HhHHHH
Confidence 44333333332211111 1235556788999999999983222223334433321 11110 0000 000000
Q ss_pred cccccccCCCCCCCCCCceEEecCCccC---CCCccccccccccccccccccchh
Q psy10545 1152 LTQSAWFRPHNRDKNLTNLYFVGAGTHP---GAANKIIKAGSKSFSSAIKLFDPV 1203 (1428)
Q Consensus 1152 ~~q~~~~rp~~~t~~i~~Ly~aGd~t~p---g~gv~GA~~sg~~~a~~i~~l~~~ 1203 (1428)
.. ..++... -+|||++|..... ...|++|+++|..+|+.|..--.+
T Consensus 433 ~~---~~~~~l~---~~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g~~e 481 (513)
T 4gde_A 433 LT---QILPKLQ---DKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVE 481 (513)
T ss_dssp HH---HHHHHHH---HTTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHCCCC
T ss_pred HH---HHHHHHh---hcCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHcCCCc
Confidence 00 1111111 2699999955422 236899999999999998754333
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.92 E-value=5.8e-25 Score=272.27 Aligned_cols=420 Identities=15% Similarity=0.169 Sum_probs=241.7
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCC-eEEEEccCCCCCCcceEEEeCCeEEcccccccCC-----chHHHHHHHH-hcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGI-STIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-----PNSIKLLFDL-SKN 782 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~-~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-----~~~~~~l~~~-lG~ 782 (1428)
.++||+|||||++||++|+.|++.|+ +|+|+|+++++||++.+....|+.+|.|++++.+ .+.+.+++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 35799999999999999999999999 8999999999999999999999999999999872 2456778888 775
Q ss_pred cccccceEEecCCc-eEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHH
Q psy10545 783 RMENYVNLLPIKPF-YRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDML 861 (1428)
Q Consensus 783 ~l~~~l~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (1428)
... ....+.. ...+..+|+.+.. ......+. +..............+....
T Consensus 83 ~~~----~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-------- 134 (472)
T 1b37_A 83 RNF----RSDFDYLAQNVYKEDGGVYDE----DYVQKRIE------------LADSVEEMGEKLSATLHASG-------- 134 (472)
T ss_dssp CEE----ECCCTTGGGCEECSSSSBCCH----HHHHHHHH------------HHHHHHHHHHHHHHTSCTTC--------
T ss_pred cee----eccCccccceeEcCCCCCCCH----HHHHHHHH------------HHHHHHHHHHHHHHhhcccc--------
Confidence 321 1111111 1123334543221 11100000 00111111110000000000
Q ss_pred HhhHHHHhhcccCCHH--HHHHhhcC---CHHHHHHHHhhc--ccccCCCCchhHH--HHHHHHhccccceee--ecCch
Q psy10545 862 FILPKLIKIKAWKSVY--SIVSQFIK---NDYLKQAFSFNS--LFIGGNPFSTSSI--YTLIHALEYEWGIWF--PKGGV 930 (1428)
Q Consensus 862 ~~~~~~~~~~~~~s~~--~~l~~~~~---~~~l~~~l~~~~--~~~g~~p~~~s~~--~~~~~~~~~~~g~~~--~~gG~ 930 (1428)
....++. .++.+... ...++.++.... ..++.++...+.. .....+.....+.++ ++||+
T Consensus 135 ---------~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~ 205 (472)
T 1b37_A 135 ---------RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGY 205 (472)
T ss_dssp ---------TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCT
T ss_pred ---------chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccccccccccCCceeeeecCCcH
Confidence 0122222 12322221 111122222111 1112222222210 000011111122333 37999
Q ss_pred HHHHHHHHHHHHHc--------CcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcC-CCCCCh
Q psy10545 931 GALIKALIKLFQNL--------GGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLG-QYAFGK 1001 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~--------G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~-~~~~p~ 1001 (1428)
+.++++|++.+.+. |++|++|++|++|..++++ +.|++.+|+++.||+||+|+|+..+...++. .+.+|.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~ 284 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPT 284 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-EEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCH
Confidence 99999999988765 6899999999999998887 4488999999999999999998877653332 467888
Q ss_pred hHHHHHhhcCCCCceEEEEEeecCCc-CCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEE
Q psy10545 1002 KKYMNLIKKKMSNSLFVIYFGLSEQY-THLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTF 1080 (1428)
Q Consensus 1002 ~~~~~l~~~~~~~s~~~v~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l 1080 (1428)
.+.++++++.++ +..+|++.+++++ +..+...+++..+.. .+ ...++... +++ .| +..++
T Consensus 285 ~~~~ai~~~~~~-~~~kv~l~~~~~~w~~~~~~~~~~~~~~~--------~~----~~~~~~~~----~~~-~p-~~~~l 345 (472)
T 1b37_A 285 WKVRAIYQFDMA-VYTKIFLKFPRKFWPEGKGREFFLYASSR--------RG----YYGVWQEF----EKQ-YP-DANVL 345 (472)
T ss_dssp HHHHHHHHSEEE-CEEEEEEECSSCCSCCSTTCSEEEECCSS--------TT----SSCEEEEC----TTT-ST-TCCEE
T ss_pred HHHHHHHhcCCc-ceeEEEEECCCcCCCCCCCcceEEecccC--------Cc----cceeeecc----cCC-CC-CCCEE
Confidence 888999999887 6789999999984 321112122211100 00 11233221 222 23 45666
Q ss_pred EEEEecCCCCCCCCCcHH-HHHHHHHHHHHHHHhccCCCcc-CceEEEEecCcccHHHHhCCCCCccccccccccccccc
Q psy10545 1081 YALIPVPNLSNSSINWSE-ESIKLKNIVFMYLEQYCIPNLR-KKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWF 1158 (1428)
Q Consensus 1081 ~v~~~~p~~~~~~~~~~~-~~ee~~~~vl~~L~~~~~P~l~-~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~ 1158 (1428)
++++..+.. ..|.. +++++.+.++++|++ ++|+.. ...+...+.+ |... ....|+.....++... ..
T Consensus 346 ~~~~~~~~a----~~~~~~~~~e~~~~~l~~L~~-~~Pg~~~~~~~~~~~~~---W~~~-~~~~G~~~~~~~g~~~--~~ 414 (472)
T 1b37_A 346 LVTVTDEES----RRIEQQSDEQTKAEIMQVLRK-MFPGKDVPDATDILVPR---WWSD-RFYKGTFSNWPVGVNR--YE 414 (472)
T ss_dssp EEEEEHHHH----HHHHTSCHHHHHHHHHHHHHH-HCTTSCCCCCSEEECCC---TTTC-TTTSSSEEECBTTCCH--HH
T ss_pred EEEechHHH----HHHHhCCHHHHHHHHHHHHHH-HcCCCCCCCCceEEecc---cCCC-CCCCcccCCCCCCCCh--hH
Confidence 666543110 12332 468899999999998 888853 2222222322 3221 2224443322222211 12
Q ss_pred CCCCCCCCCCceEEecCCccC--CCCcccccccccccccccc
Q psy10545 1159 RPHNRDKNLTNLYFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1159 rp~~~t~~i~~Ly~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
++..++| ++||||||++|++ +++|+||+.||..+|..|.
T Consensus 415 ~~~l~~p-~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~ 455 (472)
T 1b37_A 415 YDQLRAP-VGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILI 455 (472)
T ss_dssp HHHHHCC-BTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc-CCcEEEeecccCCCCCCchhHHHHHHHHHHHHHH
Confidence 3445566 8999999999987 4589999999999999885
No 20
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.92 E-value=1.6e-24 Score=269.83 Aligned_cols=415 Identities=13% Similarity=0.104 Sum_probs=242.7
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEe-----------------CCeEEcccccccCCchH
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQ-----------------DGFIFDAGPTVITDPNS 772 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~-----------------~G~~~d~G~~~i~~~~~ 772 (1428)
..+||+|||||++||+||+.|+++|++|+|||+++++||++.+.+. .|..+|.|++++.....
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSHI 89 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHHH
Confidence 4679999999999999999999999999999999999999999875 57889999988865446
Q ss_pred HHHHHHHhcccccccceEEecCCceEEE-eCC----CcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhh
Q psy10545 773 IKLLFDLSKNRMENYVNLLPIKPFYRLY-WGK----EKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYL 847 (1428)
Q Consensus 773 ~~~l~~~lG~~l~~~l~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~ 847 (1428)
+.++++++|++... +........+. ..+ |..+.++..... ++.....+......
T Consensus 90 ~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~l~~~~~~ 148 (489)
T 2jae_A 90 TLDYCRELGVEIQG---FGNQNANTFVNYQSDTSLSGQSVTYRAAKAD------------------TFGYMSELLKKATD 148 (489)
T ss_dssp HHHHHHHHTCCEEE---ECCCCTTSEEECCCSSTTTTCCEEHHHHHHH------------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCceEE---ccccCCCceEEecCCcccCCccccHHHHhhh------------------hhccHHHHHHHHHh
Confidence 78899999964321 11111111222 222 444443211111 11101111110000
Q ss_pred -hhcccCcccHHHHHHhhHHHHhhcccCCHHHHHHhhcC--------CHHHHHHHHhhc--ccccC--CCCchhHHHH--
Q psy10545 848 -SFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIK--------NDYLKQAFSFNS--LFIGG--NPFSTSSIYT-- 912 (1428)
Q Consensus 848 -~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~--------~~~l~~~l~~~~--~~~g~--~p~~~s~~~~-- 912 (1428)
.....+... ....++.+|+.++.. ....+..+.... ...+. ++.+......
T Consensus 149 ~~~~~~~~~~--------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (489)
T 2jae_A 149 QGALDQVLSR--------------EDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSG 214 (489)
T ss_dssp HTTTTTTSCH--------------HHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHT
T ss_pred ccccccccch--------------hhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhh
Confidence 000011000 012234444443100 000000000000 00010 1222222211
Q ss_pred HHHHh------ccccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCC---cEEEcCEEEEc
Q psy10545 913 LIHAL------EYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNG---QIFDADIIVSN 983 (1428)
Q Consensus 913 ~~~~~------~~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G---~~i~ad~VV~A 983 (1428)
+..++ ....+.++++||++.|+++|++.+.+ ++|++|++|++|..++++ +.|++.+| +++.||+||+|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~~~~ad~vI~a 291 (489)
T 2jae_A 215 IGRNFSFDFGYDQAMMMFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEG-VTVEYTAGGSKKSITADYAICT 291 (489)
T ss_dssp TTTTGGGGGCTTTSSSEEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEEC
T ss_pred HHHHHhhhhccccCccEEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCe-EEEEEecCCeEEEEECCEEEEC
Confidence 11111 11235678999999999999998753 789999999999999887 44777776 68999999999
Q ss_pred CCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCc-CCC-cce-EEEcCCChHHHHHHHhcCCCCCCCceE
Q psy10545 984 ADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQY-THL-AHH-TIFFPSNYKKSIENIFGKNFSRDNLSI 1060 (1428)
Q Consensus 984 ~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1428)
+|+..+. .+.. .+|+.+.+.++++.|+ +..+|++.+++++ +.. ... .+. .++.+..
T Consensus 292 ~p~~~l~-~l~~--~l~~~~~~~l~~~~~~-~~~kv~l~~~~~~w~~~~~~~g~~~-----------------~~~~~~~ 350 (489)
T 2jae_A 292 IPPHLVG-RLQN--NLPGDVLTALKAAKPS-SSGKLGIEYSRRWWETEDRIYGGAS-----------------NTDKDIS 350 (489)
T ss_dssp SCHHHHT-TSEE--CCCHHHHHHHHTEECC-CEEEEEEEESSCHHHHTTCCCSCEE-----------------EESSTTC
T ss_pred CCHHHHH-hCcc--CCCHHHHHHHHhCCCc-cceEEEEEeCCCCccCCCCcccccc-----------------cCCCCce
Confidence 9887554 3544 5778888899999998 6899999999883 211 000 000 1123455
Q ss_pred EEEeCCCCCCCCCCCCccEEEEEEecCCCCCCCCCcHH-HHHHHHHHHHHHHHhccCCC-ccCceEEEEecCcccHHHHh
Q psy10545 1061 YLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSSINWSE-ESIKLKNIVFMYLEQYCIPN-LRKKLITQRIFTPNDFKDVL 1138 (1428)
Q Consensus 1061 ~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~~~~~~-~~ee~~~~vl~~L~~~~~P~-l~~~i~~~~~~tp~~~~~~~ 1138 (1428)
++.+++..++ .|+ ...+..++..+.. ..|.. +++++.+.+++.|++ ++|. +.+.+.... +.+|.+..
T Consensus 351 ~~~~~s~~~~--~~~-~~l~~~~~~g~~~----~~~~~~~~~~~~~~~l~~L~~-~~~~~~~~~~~~~~---~~~W~~~~ 419 (489)
T 2jae_A 351 QIMFPYDHYN--SDR-GVVVAYYSSGKRQ----EAFESLTHRQRLAKAIAEGSE-IHGEKYTRDISSSF---SGSWRRTK 419 (489)
T ss_dssp EEECCSSSTT--SSC-EEEEEEEEETHHH----HHHHTSCHHHHHHHHHHHHHH-HHCGGGGSSEEEEE---EEEGGGST
T ss_pred EEEeCCCCCC--CCC-CEEEEEeeCCchh----hhhhcCCHHHHHHHHHHHHHH-HcCcchhhhccccE---EEEcCCCC
Confidence 6666665432 232 2222234432211 12432 468899999999998 8887 666555432 33455543
Q ss_pred CCCCCcccccc------cccccccccCCCCCCCCCCceEEecCCcc-CCCCcccccccccccccccc
Q psy10545 1139 GSYLGSAFSFA------PLLTQSAWFRPHNRDKNLTNLYFVGAGTH-PGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1139 ~~~~G~~~g~~------~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~-pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
+ ..|+...+. ++.. ...++..++| ++||||||+++. ++++++||+.||..+|..|.
T Consensus 420 ~-~~G~~~~~~~~~~~~~~~~--~~~~~~l~~~-~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~ 482 (489)
T 2jae_A 420 Y-SESAWANWAGSGGSHGGAA--TPEYEKLLEP-VDKIYFAGDHLSNAIAWQHGALTSARDVVTHIH 482 (489)
T ss_dssp T-TSCSSCEETTC-------C--CHHHHHHTSC-BTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHH
T ss_pred C-CCCcchhcccccCCCcccc--hhhHHHHhCC-CCcEEEeEHHhccCccHHHHHHHHHHHHHHHHH
Confidence 2 344432222 2211 1122334455 899999999984 67799999999999998874
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.90 E-value=1.2e-23 Score=262.59 Aligned_cols=427 Identities=16% Similarity=0.114 Sum_probs=244.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEE--eCCeEEcccccccCC-chHHHHHHHHhcccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYK--QDGFIFDAGPTVITD-PNSIKLLFDLSKNRMEN 786 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~--~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~ 786 (1428)
.++||+|||||++||+||+.|++.|++|+|||+++++||++.+.. ..|+.+|.|++++.. ...+.++++++|+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 111 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNE 111 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCcee
Confidence 367999999999999999999999999999999999999999988 568999999998865 45778899999965321
Q ss_pred cceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHh----hCcccH-HHHHHHHH-HHHHHHHHhhhhhcccCcccHHHH
Q psy10545 787 YVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAK----FNLNDI-KGYRLFLN-YSKKVFKEGYLSFASKSFLTINDM 860 (1428)
Q Consensus 787 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~----~~p~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1428)
+...+... +...+|....... ....... +.+... .....++. ........ +... ..
T Consensus 112 ---~~~~~~~~-~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~--- 173 (498)
T 2iid_A 112 ---FSQENDNA-WYFIKNIRKKVGE----VKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEE----LKRT---NC--- 173 (498)
T ss_dssp ---ECSCCTTS-EEEETTEEEEHHH----HHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHH----HHHS---CH---
T ss_pred ---ecccCCcc-EEEeCCeeecccc----cccCccccccCCCccccCCCHHHHHHHHHHHHHHH----Hhhc---cH---
Confidence 11111111 1122333222110 0000000 001000 00111111 11111000 0000 00
Q ss_pred HHhhHHHHhhcccCCHHHHHHhhcC-CHHHHHHHH-hhcccccCCCCchhHHHHHHHHhccccceeeecCchHHHHHHHH
Q psy10545 861 LFILPKLIKIKAWKSVYSIVSQFIK-NDYLKQAFS-FNSLFIGGNPFSTSSIYTLIHALEYEWGIWFPKGGVGALIKALI 938 (1428)
Q Consensus 861 ~~~~~~~~~~~~~~s~~~~l~~~~~-~~~l~~~l~-~~~~~~g~~p~~~s~~~~~~~~~~~~~g~~~~~gG~~~l~~~L~ 938 (1428)
.......+..++.+|+.+... +......+. ...............+... .......+.++++||++.|+++|+
T Consensus 174 ----~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gG~~~l~~~l~ 248 (498)
T 2iid_A 174 ----SYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHD-DIFAYEKRFDEIVDGMDKLPTAMY 248 (498)
T ss_dssp ----HHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHH-HHHTTCCCEEEETTCTTHHHHHHH
T ss_pred ----HHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcccchhHHHHHHHHHH-hccccCcceEEeCCcHHHHHHHHH
Confidence 011111135778888877542 333333322 1111000000001111111 112223356789999999999999
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCc----EEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCC
Q psy10545 939 KLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQ----IFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSN 1014 (1428)
Q Consensus 939 ~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~----~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~ 1014 (1428)
+.+.+ +|++|++|++|..++++ +.|++.+|+ ++.||+||+|+|+..+. .+.-.+.+|+.+.++++++.++
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~~~-v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~-~i~f~p~Lp~~~~~ai~~l~~~- 322 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQNDQK-VTVVYETLSKETPSVTADYVIVCTTSRAVR-LIKFNPPLLPKKAHALRSVHYR- 322 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECSSC-EEEEEECSSSCCCEEEESEEEECSCHHHHT-TSEEESCCCHHHHHHHHHCCEE-
T ss_pred Hhccc---ccccCCEEEEEEECCCe-EEEEEecCCcccceEEeCEEEECCChHHHh-heecCCCCCHHHHHHHHhCCCc-
Confidence 88764 79999999999998877 567776664 58999999999887543 3444456899988999999998
Q ss_pred ceEEEEEeecCCc-CCCcc-eEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCC
Q psy10545 1015 SLFVIYFGLSEQY-THLAH-HTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNS 1092 (1428)
Q Consensus 1015 s~~~v~l~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~ 1092 (1428)
+..+|++.|++++ +.... .... ..+.+..++++++. ..|+|..++..++..+..
T Consensus 323 ~~~kv~l~~~~~~w~~~~~~~~~~-----------------~~~~~~~~~~~~s~----~~p~g~~~L~~~~~g~~a--- 378 (498)
T 2iid_A 323 SGTKIFLTCTTKFWEDDGIHGGKS-----------------TTDLPSRFIYYPNH----NFTNGVGVIIAYGIGDDA--- 378 (498)
T ss_dssp CEEEEEEEESSCGGGGGTCCSSEE-----------------EESSTTCEEECCSS----CCTTSCEEEEEEEEHHHH---
T ss_pred ceeEEEEEeCCCCccCCCccCCcc-----------------cCCCCcceEEECCC----CCCCCCcEEEEEeCCccH---
Confidence 5789999999984 22100 0000 11223345555542 246676777665543211
Q ss_pred CCCcH-HHHHHHHHHHHHHHHhccCCCccCc----eEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCC
Q psy10545 1093 SINWS-EESIKLKNIVFMYLEQYCIPNLRKK----LITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNL 1167 (1428)
Q Consensus 1093 ~~~~~-~~~ee~~~~vl~~L~~~~~P~l~~~----i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i 1167 (1428)
..|. .+++++.+.++++|++ +++.-.+. ..... -..|... ....|+.....++.. ..+++....| +
T Consensus 379 -~~~~~~~~~~~~~~~l~~L~~-~~g~~~~~~~~~~~~~~---~~~W~~~-p~~~G~~~~~~~~~~--~~~~~~l~~p-~ 449 (498)
T 2iid_A 379 -NFFQALDFKDCADIVFNDLSL-IHQLPKKDIQSFCYPSV---IQKWSLD-KYAMGGITTFTPYQF--QHFSDPLTAS-Q 449 (498)
T ss_dssp -HTTTTSCHHHHHHHHHHHHHH-HHTCCHHHHHHHEEEEE---EEEGGGC-TTTCSSEECCCTTHH--HHHHHHHHCC-B
T ss_pred -hhhhcCCHHHHHHHHHHHHHH-HcCCChhhhhhhcCccE---EEecCCC-CCCCceeeecCCcch--HHHHHHHhCC-C
Confidence 1232 2457788999999998 55411111 11111 1233332 123344322222211 1122233444 7
Q ss_pred CceEEecCCccC-CCCcccccccccccccccc
Q psy10545 1168 TNLYFVGAGTHP-GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1168 ~~Ly~aGd~t~p-g~gv~GA~~sg~~~a~~i~ 1198 (1428)
+||||||++|.. .++|+||+.||..+|..|.
T Consensus 450 ~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~ 481 (498)
T 2iid_A 450 GRIYFAGEYTAQAHGWIDSTIKSGLRAARDVN 481 (498)
T ss_dssp TTEEECSGGGSSSSSCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcccccCCcCHHHHHHHHHHHHHHHH
Confidence 899999999954 3479999999999998874
No 22
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.90 E-value=1.1e-23 Score=259.92 Aligned_cols=407 Identities=15% Similarity=0.124 Sum_probs=252.6
Q ss_pred ccceeeecCCCcchHHHHHHHHhCC-CeEEEEccCCCCCCcceEE-EeCCeEEcccccccCC-chHHHHHHHHhcccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAG-ISTIILEQRDKPGGRAYVY-KQDGFIFDAGPTVITD-PNSIKLLFDLSKNRMEN 786 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G-~~V~VlEa~~~~GGr~~s~-~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~ 786 (1428)
.++||+|||||++||+||++|+++| .+|+|+|+++++||++++. ..+|+.+|.|++++.. ...+.+++++++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~~---- 83 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAVQ---- 83 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHCS----
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHhh----
Confidence 4689999999999999999999998 7999999999999999996 6789999999998865 4556777777641
Q ss_pred cceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHH
Q psy10545 787 YVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPK 866 (1428)
Q Consensus 787 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1428)
++.+..... ..+.+|+.+.+|.+.. +..+ +.. ... .. ...+... . ...
T Consensus 84 --~~~~~~~~~-~~~~~g~~~~~P~~~~-----~~~l-~~~-~~~-~~---~~~ll~~--~--~~~-------------- 131 (484)
T 4dsg_A 84 --GWNVLQRES-WVWVRGRWVPYPFQNN-----IHRL-PEQ-DRK-RC---LDELVRS--H--ART-------------- 131 (484)
T ss_dssp --CEEEEECCC-EEEETTEEEESSGGGC-----GGGS-CHH-HHH-HH---HHHHHHH--H--HCC--------------
T ss_pred --hhhhccCce-EEEECCEEEEeCccch-----hhhC-CHH-HHH-HH---HHHHHHH--H--hcc--------------
Confidence 122222222 3344677777762110 1111 111 000 00 0011100 0 000
Q ss_pred HHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhH-----------HHHHHH-Hhcc-------ccc-eee
Q psy10545 867 LIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSS-----------IYTLIH-ALEY-------EWG-IWF 925 (1428)
Q Consensus 867 ~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~-----------~~~~~~-~~~~-------~~g-~~~ 925 (1428)
......++.+|+.+.+..+..+.++.. ....++.++.+.++ +..++. .+.. ..+ ..+
T Consensus 132 --~~~~~~s~~e~~~~~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~y 209 (484)
T 4dsg_A 132 --YTEPPNNFEESFTRQFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRF 209 (484)
T ss_dssp --CSSCCSSHHHHHHHHHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEE
T ss_pred --CCCCCCCHHHHHHHHhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEe
Confidence 011356778888776554444333331 22344555544332 111111 1111 012 234
Q ss_pred e-cCchHHHHHHHHHHHHHcCcEEEeC--ceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCC--CCCC
Q psy10545 926 P-KGGVGALIKALIKLFQNLGGNLILN--SQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQ--YAFG 1000 (1428)
Q Consensus 926 ~-~gG~~~l~~~L~~~l~~~G~~V~~~--~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~--~~~p 1000 (1428)
| +||++.++++|++.+.+ .+|+++ ++|++|..++++ |++.+|+++.||+||+|+|++.+.. ++.+ +.+|
T Consensus 210 p~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~~~~---v~~~~G~~~~ad~VI~a~p~~~~~~-ll~~~~~~~~ 283 (484)
T 4dsg_A 210 PQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDADAKT---ITFSNGEVVSYDYLISTVPFDNLLR-MTKGTGFKGY 283 (484)
T ss_dssp ESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETTTTE---EEETTSCEEECSEEEECSCHHHHHH-HEECSSCTTG
T ss_pred ecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEecCCE---EEECCCCEEECCEEEECCCHHHHHH-HhhccCCCCC
Confidence 5 48999999999998854 289999 569999987775 4568898999999999999988876 5543 3356
Q ss_pred hhHHHHHhhcCCCCceEEEEEeecCCcC-C-CcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCcc
Q psy10545 1001 KKKYMNLIKKKMSNSLFVIYFGLSEQYT-H-LAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCS 1078 (1428)
Q Consensus 1001 ~~~~~~l~~~~~~~s~~~v~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~ 1078 (1428)
+...+.+.++.|. ++.+|+++++++.+ + .+.+.+++++ . +.+...++.+++++|..+|+|++
T Consensus 284 ~~~~~~l~~l~y~-s~~~v~l~~~~~~~~~~~~~~~i~vp~-~--------------~~~~~ri~~~s~~~p~~ap~g~~ 347 (484)
T 4dsg_A 284 DEWPAIADKMVYS-STNVIGIGVKGTPPPHLKTACWLYFPE-D--------------TSPFYRATVFSNYSKYNVPEGHW 347 (484)
T ss_dssp GGHHHHHHHCCEE-EEEEEEEEEESCCCGGGTTCCEEECCS-T--------------TCSCSEEECGGGTCGGGSCTTEE
T ss_pred HHHHHHHhCCCcC-ceEEEEEEEcCCCcccCCCCeEEEEEc-C--------------CCeEEEEEeecCCCcccCCCCeE
Confidence 6777888999998 78999999998743 2 2345565532 1 12445678888889999999998
Q ss_pred EEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCcc--CceEEEEec-CcccHHHHhCCCCCcccccccccc-c
Q psy10545 1079 TFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLR--KKLITQRIF-TPNDFKDVLGSYLGSAFSFAPLLT-Q 1154 (1428)
Q Consensus 1079 ~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~--~~i~~~~~~-tp~~~~~~~~~~~G~~~g~~~~~~-q 1154 (1428)
++++.++.. ..|..+++++++.++++|.+ + ..+. +.+....+. .|. .+.. | .++.. .
T Consensus 348 ~l~~e~~~~------~~~~~~d~~l~~~a~~~L~~-~-~~~~~~~~~~~~~v~r~~~----~yP~-----y--~~~~~~~ 408 (484)
T 4dsg_A 348 SLMLEVSES------KYKPVNHSTLIEDCIVGCLA-S-NLLLPEDLLVSKWHYRIEK----GYPT-----P--FIGRNNL 408 (484)
T ss_dssp EEEEEEEEB------TTBCCCTTSHHHHHHHHHHH-T-TSCCTTCCEEEEEEEEEEE----EEEC-----C--BTTHHHH
T ss_pred EEEEEEecC------cCCcCCHHHHHHHHHHHHHH-c-CCCCccceEEEEEEEEeCc----cccC-----C--CccHHHH
Confidence 888877553 13445668899999999998 3 2332 223221110 011 0000 0 00000 0
Q ss_pred ccccCCCCCCCCCCceEEecCCccC--C-CCcccccccccccccccc
Q psy10545 1155 SAWFRPHNRDKNLTNLYFVGAGTHP--G-AANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1155 ~~~~rp~~~t~~i~~Ly~aGd~t~p--g-~gv~GA~~sg~~~a~~i~ 1198 (1428)
....+.... .. ||+++|..... | .+++.|+.+|..+|+.|.
T Consensus 409 ~~~~~~~l~--~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 409 LEKAQPELM--SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHH--HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH--hC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 001111111 13 89999986432 3 378999999999999886
No 23
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.89 E-value=2.8e-22 Score=245.59 Aligned_cols=405 Identities=13% Similarity=0.081 Sum_probs=240.4
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeC---CeEEcccccccCC--chHHHHHHHHhccccc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQD---GFIFDAGPTVITD--PNSIKLLFDLSKNRME 785 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~---G~~~d~G~~~i~~--~~~~~~l~~~lG~~l~ 785 (1428)
++||||||||++||+||+.|+++|++|+|||+++++||++.+.+.+ |..++.|++++.. ...+.++++++|++..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 80 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTA 80 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeee
Confidence 4799999999999999999999999999999999999999998877 9999999999864 3455667788885422
Q ss_pred ccceEEecCCceEEEe--CCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHh
Q psy10545 786 NYVNLLPIKPFYRLYW--GKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFI 863 (1428)
Q Consensus 786 ~~l~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (1428)
.........+ .++......... +.....+... ...+...........++..
T Consensus 81 ------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~------- 133 (431)
T 3k7m_X 81 ------AASEFTSFRHRLGPTAVDQAFPIP-----------GSEAVAVEAA---TYTLLRDAHRIDLEKGLEN------- 133 (431)
T ss_dssp ------ECCCCCEECCBSCTTCCSSSSCCC-----------GGGHHHHHHH---HHHHHHHHTTCCTTTCTTS-------
T ss_pred ------ecCCCCcEEEEecCCeecCCCCCC-----------HHHHHHHHHH---HHHHHHHHHhcCCCCCccC-------
Confidence 1111112222 122111000000 0011111111 1111111000000001000
Q ss_pred hHHHHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhHHHHHHHHhccc---------cceeeecCchHHH
Q psy10545 864 LPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSSIYTLIHALEYE---------WGIWFPKGGVGAL 933 (1428)
Q Consensus 864 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~~~~~~~~~~~~---------~g~~~~~gG~~~l 933 (1428)
+....+ +.++.+++......+....++.. ....++..+.+.+....+ .++... .....+.+|++.+
T Consensus 134 -~~~~~~--d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~l 209 (431)
T 3k7m_X 134 -QDLEDL--DIPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWML-QLVAAHHYSILGVVLSLDEVFSNGSADL 209 (431)
T ss_dssp -SSCGGG--CSBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHH-HHHHHTTSCHHHHHHTCCEEETTCTHHH
T ss_pred -cchhhh--cCCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHH-HHHHhcCCccceeecchhhhcCCcHHHH
Confidence 000112 27788888888777777766643 334456666666553221 111111 1112578999998
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCC
Q psy10545 934 IKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMS 1013 (1428)
Q Consensus 934 ~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~ 1013 (1428)
++.+.+ +.| +|++|++|++|..++++ +.|++.+|+++.||+||+|+|+..+. .+.-.+.+|....+.+....+.
T Consensus 210 ~~~~~~---~~g-~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vi~a~~~~~l~-~i~~~p~l~~~~~~~~~~~~~~ 283 (431)
T 3k7m_X 210 VDAMSQ---EIP-EIRLQTVVTGIDQSGDV-VNVTVKDGHAFQAHSVIVATPMNTWR-RIVFTPALPERRRSVIEEGHGG 283 (431)
T ss_dssp HHHHHT---TCS-CEESSCCEEEEECSSSS-EEEEETTSCCEEEEEEEECSCGGGGG-GSEEESCCCHHHHHHHHHCCCC
T ss_pred HHHHHh---hCC-ceEeCCEEEEEEEcCCe-EEEEECCCCEEEeCEEEEecCcchHh-heeeCCCCCHHHHHHHHhCCCc
Confidence 888754 446 99999999999988777 55888899889999999999888664 3544567888888889888887
Q ss_pred CceEEEEEeecCCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCC
Q psy10545 1014 NSLFVIYFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSS 1093 (1428)
Q Consensus 1014 ~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~ 1093 (1428)
..++|++.+++++++ ++...+ . ....++...+. ..+..++..++..+.
T Consensus 284 -~~~kv~~~~~~~~~~-----i~~~~d-----------~---~~~~~~~~~~~-------~~~~~~l~~~~~g~~----- 331 (431)
T 3k7m_X 284 -QGLKILIHVRGAEAG-----IECVGD-----------G---IFPTLYDYCEV-------SESERLLVAFTDSGS----- 331 (431)
T ss_dssp -CEEEEEEEEESCCTT-----EEEEBS-----------S---SSSEEEEEEEC-------SSSEEEEEEEEETTT-----
T ss_pred -ceEEEEEEECCCCcC-----ceEcCC-----------C---CEEEEEeCcCC-------CCCCeEEEEEecccc-----
Confidence 568999999998742 221111 0 01122222211 123345555544322
Q ss_pred CCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCceEEe
Q psy10545 1094 INWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFV 1173 (1428)
Q Consensus 1094 ~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~a 1173 (1428)
++..++ +.+.+.|++ ++|++. .+... ...|....+. .|+.....++ +....++..+.| +.+||||
T Consensus 332 --~~~~~~---~~~~~~l~~-~~~~~~--~~~~~---~~~W~~d~~~-~G~~~~~~~g--~~~~~~~~l~~p-~g~~~fA 396 (431)
T 3k7m_X 332 --FDPTDI---GAVKDAVLY-YLPEVE--VLGID---YHDWIADPLF-EGPWVAPRVG--QFSRVHKELGEP-AGRIHFV 396 (431)
T ss_dssp --CCTTCH---HHHHHHHHH-HCTTCE--EEEEE---CCCTTTCTTT-SSSSCCCCTT--TTTTSSGGGGSC-BTTEEEC
T ss_pred --CCCCCH---HHHHHHHHH-hcCCCC--ccEeE---ecccCCCCCC-CCCCCCcCCC--CCcccHHHHhCC-CCcEEEE
Confidence 111111 245567787 788754 21111 1233332222 3443222222 323345556666 8999999
Q ss_pred cCCccC--CCCccccccccccccccccc
Q psy10545 1174 GAGTHP--GAANKIIKAGSKSFSSAIKL 1199 (1428)
Q Consensus 1174 Gd~t~p--g~gv~GA~~sg~~~a~~i~~ 1199 (1428)
|+.|.+ .+.|+||+.||..+|..|.-
T Consensus 397 Ge~t~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 397 GSDVSLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp SGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred ehhhhccCCeEehHHHHHHHHHHHHHHh
Confidence 988763 34699999999999998863
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.89 E-value=2.6e-22 Score=245.17 Aligned_cols=408 Identities=13% Similarity=0.129 Sum_probs=231.6
Q ss_pred ccceeeecCCCcchHHHHHHHHhCC-CeEEEEccCCCCCCcceEEEeCCeEEcccccccCC-chHHHHHHHHhccccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAG-ISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD-PNSIKLLFDLSKNRMENY 787 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G-~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~-~~~~~~l~~~lG~~l~~~ 787 (1428)
.++||+|||||++||+||++|+++| ++|+|+|+++++||+++|.+.+|+.+|.|++++.. ...+.++++++|.++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~- 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG- 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS-
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCcccc-
Confidence 4689999999999999999999999 99999999999999999999999999999999865 35678899999965422
Q ss_pred ceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhccc-CcccHHHHHHhhHH
Q psy10545 788 VNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASK-SFLTINDMLFILPK 866 (1428)
Q Consensus 788 l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 866 (1428)
.+....+.+.+|.......++... ..+...+..+.......+..+... .+..
T Consensus 84 -----~~~~~~~~~~~g~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------- 136 (424)
T 2b9w_A 84 -----PKLRREFLHEDGEIYVPEKDPVRG------------PQVMAAVQKLGQLLATKYQGYDANGHYNK---------- 136 (424)
T ss_dssp -----CCCCEEEECTTSCEECGGGCTTHH------------HHHHHHHHHHHHHHHTTTTTTTSSSSSSC----------
T ss_pred -----ccccceeEcCCCCEeccccCcccc------------hhHHHHHHHHHHHHhhhhhhcccccchhh----------
Confidence 122234556666644221111110 000001111111111111111000 0000
Q ss_pred HHhhcccCCHHHHHHhhcCCHHHHHHHHhhcccccCCCCchhHHHHHHHHhc-------cccceeeecCchHHHHHHHHH
Q psy10545 867 LIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFSTSSIYTLIHALE-------YEWGIWFPKGGVGALIKALIK 939 (1428)
Q Consensus 867 ~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~g~~p~~~s~~~~~~~~~~-------~~~g~~~~~gG~~~l~~~L~~ 939 (1428)
.......++.+|+.+...+.....+..........++.+.++.+. +.+.. ..++.+.+.+|++.++++|.+
T Consensus 137 -~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~ 214 (424)
T 2b9w_A 137 -VHEDLMLPFDEFLALNGCEAARDLWINPFTAFGYGHFDNVPAAYV-LKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNA 214 (424)
T ss_dssp -CCGGGGSBHHHHHHHTTCGGGHHHHTTTTCCCCCCCTTTSBHHHH-HHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHH
T ss_pred -hhhhhccCHHHHHHhhCcHHHHHHHHHHHHhhccCChHhcCHHHH-HHhhhHhhhhcccCCceEEeCChHHHHHHHHHH
Confidence 001125789999988766543333333222222235666666443 22211 123567889999999999987
Q ss_pred HHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEE
Q psy10545 940 LFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVI 1019 (1428)
Q Consensus 940 ~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v 1019 (1428)
.+ +.+|++|++|++|..+++++ .|++.+|+ +.||+||+|+|+..+.. +++. .| ..++.+.++.+.. +.+
T Consensus 215 ~l---~~~v~~~~~V~~i~~~~~~v-~v~~~~g~-~~ad~Vv~a~~~~~~~~-~l~~--~~-~~~~~~~~~~~~~--~~~ 283 (424)
T 2b9w_A 215 TL---EHPAERNVDITRITREDGKV-HIHTTDWD-RESDVLVLTVPLEKFLD-YSDA--DD-DEREYFSKIIHQQ--YMV 283 (424)
T ss_dssp HS---SSCCBCSCCEEEEECCTTCE-EEEESSCE-EEESEEEECSCHHHHTT-SBCC--CH-HHHHHHTTCEEEE--EEE
T ss_pred hh---cceEEcCCEEEEEEEECCEE-EEEECCCe-EEcCEEEECCCHHHHhh-ccCC--CH-HHHHHHhcCCcce--eEE
Confidence 76 46899999999999888774 48888884 99999999999987654 4432 22 2334556666652 334
Q ss_pred EEeecCCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCCCCc-HH
Q psy10545 1020 YFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSSINW-SE 1098 (1428)
Q Consensus 1020 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~~~~-~~ 1098 (1428)
.+.+...+|.. ..+++.++.... .+ ..++.... . + +.....+..++..+.. .+ +.
T Consensus 284 ~~~~~~~~~~~---~~~~~~~~~~~~-----~g-----~~~~~~~~--~-~---~~~~~~l~~~~~~~~~-----~~~~~ 339 (424)
T 2b9w_A 284 DACLVKEYPTI---SGYVPDNMRPER-----LG-----HVMVYYHR--W-A---DDPHQIITTYLLRNHP-----DYADK 339 (424)
T ss_dssp EEEEESSCCSS---EEECGGGGSGGG-----TT-----SCCEEEEC--C-T---TCTTSCEEEEEECCBT-----TBCCC
T ss_pred EEEEeccCCcc---cccccCCCCCcC-----CC-----cceEEeee--c-C---CCCceEEEEEeccCCC-----ccccc
Confidence 44555555432 234433221100 00 11111111 0 1 1112344444432211 12 22
Q ss_pred HHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCceEEecCCcc
Q psy10545 1099 ESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTH 1178 (1428)
Q Consensus 1099 ~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~ 1178 (1428)
+.+++.+.+++.|.+ +.+...+.+... +|... .. +. +...+.+..++.....+.+||||||+++.
T Consensus 340 ~~~~~~~~v~~~l~~-l~~~~~~~~~~~------~w~~~-p~-----~~--~~~~~~G~~~~~~~~~~~~~l~~aG~~~~ 404 (424)
T 2b9w_A 340 TQEECRQMVLDDMET-FGHPVEKIIEEQ------TWYYF-PH-----VS--SEDYKAGWYEKVEGMQGRRNTFYAGEIMS 404 (424)
T ss_dssp CHHHHHHHHHHHHHH-TTCCEEEEEEEE------EEEEE-EE-----CC--HHHHHTTHHHHHHHTTTGGGEEECSGGGS
T ss_pred ChHHHHHHHHHHHHH-cCCccccccccc------ceeee-ec-----cC--HHHHhccHHHHHHHHhCCCCceEeccccc
Confidence 357888999999997 544433222111 11100 00 00 00000000111111123689999999987
Q ss_pred CCCCcccccccccccccccc
Q psy10545 1179 PGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1179 pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
.| .+++|+.||..+|+.+.
T Consensus 405 ~g-~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 405 FG-NFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp CS-SHHHHHHHHHHHHHHHT
T ss_pred cc-cHHHHHHHHHHHHHHhc
Confidence 44 48999999999998764
No 25
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.87 E-value=3e-21 Score=233.52 Aligned_cols=286 Identities=14% Similarity=0.111 Sum_probs=172.5
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCc-ccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYP-NTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~-~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+|+||+|+||+|+++|+.|+++|++|+|+|+++.+ +.+ .||+++.+..+. ......+...
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~-----------~~~~~~g~~l~~~~l~--~l~~~~~~~~------ 65 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI-----------GSPVRCGEGLSKGILN--EADIKADRSF------ 65 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST-----------TCSCCSCCEEETHHHH--HTTCCCCTTT------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC-----------CCCCceecccCHHHHH--HcCCCchhhh------
Confidence 68899999999999999999999999999998766 333 466777665332 1111110000
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCc-cEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPS-YQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVE 468 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~ 468 (1428)
...++..+....... ..+.++. .......+++++|..|++.|.+++.+.| .++.+++|+
T Consensus 66 ------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~ 126 (397)
T 3oz2_A 66 ------------------IANEVKGARIYGPSEKRPIILQS-EKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPAL 126 (397)
T ss_dssp ------------------EEEEESEEEEECTTCSSCEEEEC-SSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEE
T ss_pred ------------------hhcccceEEEEeCCCceEeeccc-cccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeee
Confidence 000111111111111 1111111 1123346789999999999999999888 788899998
Q ss_pred EEeCC--e---EEE-cCC--cEEEeeEEEecCCCCCCC-----C----CcceEEEEEEEEEecCCcCCCCceEEecccCC
Q psy10545 469 IITPT--S---IRI-NNK--KIINANCIIDGRGLKNSQ-----F----DGIYQIFLGQQWNLSSPHGLDIPIIMDATVNQ 531 (1428)
Q Consensus 469 ~i~~~--~---v~l-~~g--~~~~a~lvI~AdG~~S~~-----~----~~~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~ 531 (1428)
++..+ . +.. .++ .+++|++||+|||.+|.. . ..+.+......++............+.+...
T Consensus 127 ~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (397)
T 3oz2_A 127 GVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSI- 205 (397)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTT-
T ss_pred eeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeecc-
Confidence 87532 2 222 233 369999999999999751 1 1233444455544433322222222222211
Q ss_pred CCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHHHHc-CCccceeeeeeeeeecccCCchhhhhccCccc
Q psy10545 532 KNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIKN-RWKLKNIEREEIGSIPIALKNEKIIKFKKTIC 610 (1428)
Q Consensus 532 ~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~l 610 (1428)
...+++|++|.+++.++++......... ....+.+.+.+++... ++..........+.+|+...... ...+|+++
T Consensus 206 --~~~g~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~v~l 281 (397)
T 3oz2_A 206 --APAGYIWVFPKGEGMANVGIGSSINWIH-NRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMP-ITMPGLML 281 (397)
T ss_dssp --STTEEEEEEEEETTEEEEEEEEETTTSC-SHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSC-CEETTEEE
T ss_pred --CCCceEEEeecccceeEEEEeeccchhh-hhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccc-eeeeeEEE
Confidence 1235789999999888887665544332 4455566666655432 11223334445677887655432 35589999
Q ss_pred ccccccccccCCCCChHHHHHHHHHHHhhc
Q psy10545 611 VGLRANLLHATTGYSLPIAIQLAENIAKYS 640 (1428)
Q Consensus 611 vGdAA~~vhP~~G~G~~~a~~la~~l~~~~ 640 (1428)
+|||||.++|++|||++.|+..+..+++++
T Consensus 282 vGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i 311 (397)
T 3oz2_A 282 VGDAARLIDPITGGGIANAIVSGMYAAQVT 311 (397)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCcchhHHHHHHHHHHHHHHH
Confidence 999999999999999876555544444433
No 26
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.87 E-value=7.5e-22 Score=252.77 Aligned_cols=238 Identities=12% Similarity=0.031 Sum_probs=145.2
Q ss_pred ceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecC------CcEEEcCEEEEcCCHHHHHHHhc-
Q psy10545 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKN------GQIFDADIIVSNADIINTYRNLL- 994 (1428)
Q Consensus 922 g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~------G~~i~ad~VV~A~~~~~~~~~Ll- 994 (1428)
..+.++||++.|+++|++ +.+|++|++|++|..++++ +.|++.+ |+++.||+||+|+|+..+.. +.
T Consensus 392 ~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~-l~~ 464 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ-QPP 464 (662)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEETTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHC-SSC
T ss_pred ceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECCCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhc-ccC
Confidence 346889999999999875 5689999999999999887 5677655 57899999999998776653 21
Q ss_pred ---CCCCCChhHHHHHhhcCCCCceEEEEEeecCCc-CCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCC
Q psy10545 995 ---GQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQY-THLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDL 1070 (1428)
Q Consensus 995 ---~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~ 1070 (1428)
-.+++|..+.++++++.++ +..||++.|++++ +.......++.+.. .....+++.+++.
T Consensus 465 ~i~f~P~LP~~k~~Ai~~l~~g-~~~KV~l~f~~~fW~~~~~~~G~l~~~~-------------~~~~~~~~~~~~~--- 527 (662)
T 2z3y_A 465 AVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRVFWDPSVNLFGHVGSTT-------------ASRGELFLFWNLY--- 527 (662)
T ss_dssp SSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSCCSCTTCSEEEECCSSS-------------TTTTEEEEEECCS---
T ss_pred ceEEcCCCCHHHHHHHHhCCcc-ceeEEEEEcCcccccCCCCceeeecCCC-------------CCCCceeEEEeCC---
Confidence 2467898888999999998 6789999999995 32111122221110 1122344444331
Q ss_pred CCCCCCccEEEEEEecCCCCCCCCCc-HHHHHHHHHHHHHHHHhccCCCcc-CceEEEEecCcccHHHHhCCCCCccccc
Q psy10545 1071 SLAPTGCSTFYALIPVPNLSNSSINW-SEESIKLKNIVFMYLEQYCIPNLR-KKLITQRIFTPNDFKDVLGSYLGSAFSF 1148 (1428)
Q Consensus 1071 s~ap~G~~~l~v~~~~p~~~~~~~~~-~~~~ee~~~~vl~~L~~~~~P~l~-~~i~~~~~~tp~~~~~~~~~~~G~~~g~ 1148 (1428)
+..++.+++..+... .+ ..+++++.+.++++|.+ +++... .......+ ..|.+. ....|+....
T Consensus 528 -----~~~vL~~~~~G~~a~----~~~~lsdee~~~~~l~~L~~-~~g~~~~~~p~~~~v---~~W~~d-p~~~Gsys~~ 593 (662)
T 2z3y_A 528 -----KAPILLALVAGEAAG----IMENISDDVIVGRCLAILKG-IFGSSAVPQPKETVV---SRWRAD-PWARGSYSYV 593 (662)
T ss_dssp -----SSSEEEEEECTHHHH----HHTTSCHHHHHHHHHHHHHH-HHCTTSSCCCSEEEE---CCTTTC-TTTSSSCEEC
T ss_pred -----CCCEEEEEeccHhHH----HHHhCCHHHHHHHHHHHHHH-HhCCcccCCCceeEE---EEECCC-CCCCcccccC
Confidence 223565555321110 11 12467888999999998 665321 12222211 122222 1123332111
Q ss_pred cccccc---ccccCC--------CCCCCCCCceEEecCCccC--CCCcccccccccccccccc
Q psy10545 1149 APLLTQ---SAWFRP--------HNRDKNLTNLYFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1149 ~~~~~q---~~~~rp--------~~~t~~i~~Ly~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
.++... .....| ....+ .++|||||++|++ .++|+||+.||..+|..|.
T Consensus 594 ~pg~~~~~~~~l~~p~~~~~~~~~~~~~-~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~ 655 (662)
T 2z3y_A 594 AAGSSGNDYDLMAQPITPGPSIPGAPQP-IPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 655 (662)
T ss_dssp BTTCCTHHHHHHHCCBCC---------C-CCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHH
T ss_pred CCCCchhhHHHHhCcCccccccccccCC-CCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHH
Confidence 221110 001112 22333 6899999999974 3479999999999998874
No 27
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.87 E-value=7.7e-22 Score=254.52 Aligned_cols=238 Identities=12% Similarity=0.026 Sum_probs=144.2
Q ss_pred ceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecC------CcEEEcCEEEEcCCHHHHHHHhc-
Q psy10545 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKN------GQIFDADIIVSNADIINTYRNLL- 994 (1428)
Q Consensus 922 g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~------G~~i~ad~VV~A~~~~~~~~~Ll- 994 (1428)
..+.++||++.|+++|++ +.+|++|++|++|..++++ +.|++.+ |+++.||+||+|+|+..+.. +.
T Consensus 563 ~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~-l~~ 635 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ-QPP 635 (852)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEETTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHC-SSC
T ss_pred ceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEcCCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHh-hhc
Confidence 346889999999999976 4579999999999999887 5577655 57899999999998876654 32
Q ss_pred ---CCCCCChhHHHHHhhcCCCCceEEEEEeecCCc-CCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCC
Q psy10545 995 ---GQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQY-THLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDL 1070 (1428)
Q Consensus 995 ---~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~ 1070 (1428)
-.+.+|.++.++++++.++ ++.+|++.|++++ +.-.....++.+... ....+++.+++.
T Consensus 636 ~I~F~P~LP~~k~~AI~~l~~g-~v~KV~L~F~~~fW~~~~~~fG~l~~~~~-------------~~~~l~~~~~~~--- 698 (852)
T 2xag_A 636 AVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRVFWDPSVNLFGHVGSTTA-------------SRGELFLFWNLY--- 698 (852)
T ss_dssp SSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSCCSCTTCCEEEECCSSST-------------TTTTTCEEEECS---
T ss_pred ccccCCCCCHHHHHHHHcCCcc-ceEEEEEEcCCcccCCCCCeeeeeccccC-------------CCCceEEEecCC---
Confidence 2467888888999999998 6789999999984 321111222221100 001111222221
Q ss_pred CCCCCCccEEEEEEecCCCCCCCCCc-HHHHHHHHHHHHHHHHhccCCCcc-CceEEEEecCcccHHHHhCCCCCccccc
Q psy10545 1071 SLAPTGCSTFYALIPVPNLSNSSINW-SEESIKLKNIVFMYLEQYCIPNLR-KKLITQRIFTPNDFKDVLGSYLGSAFSF 1148 (1428)
Q Consensus 1071 s~ap~G~~~l~v~~~~p~~~~~~~~~-~~~~ee~~~~vl~~L~~~~~P~l~-~~i~~~~~~tp~~~~~~~~~~~G~~~g~ 1148 (1428)
+..++++++..+... .+ ..+++++++.++++|.+ +++... .......+ ..|.+. ....|++..+
T Consensus 699 -----~~pvLl~~v~G~~a~----~l~~lsdeel~~~~l~~L~~-ifG~~~~~~P~~~~v---trW~~d-p~s~GsYs~~ 764 (852)
T 2xag_A 699 -----KAPILLALVAGEAAG----IMENISDDVIVGRCLAILKG-IFGSSAVPQPKETVV---SRWRAD-PWARGSYSYV 764 (852)
T ss_dssp -----SSSEEEEEECHHHHH----HGGGSCHHHHHHHHHHHHHH-HHCTTTCCCCSEEEE---CCTTTC-TTTSSSCEEC
T ss_pred -----CCCEEEEEecCcCHH----HHhcCCHHHHHHHHHHHHHH-HhCccccCCceEEEE---EecCCC-CCcCcccccc
Confidence 123555555332111 12 22468889999999998 664321 12222221 122222 1113332111
Q ss_pred cccccc---cccc--------CCCCCCCCCCceEEecCCccC--CCCcccccccccccccccc
Q psy10545 1149 APLLTQ---SAWF--------RPHNRDKNLTNLYFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1149 ~~~~~q---~~~~--------rp~~~t~~i~~Ly~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
.++... .... +|....+ .++|||||++|+. .++|+||+.||..+|..|.
T Consensus 765 ~pG~~~~~~~~L~~P~~~~~~~p~~~~~-~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il 826 (852)
T 2xag_A 765 AAGSSGNDYDLMAQPITPGPSIPGAPQP-IPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA 826 (852)
T ss_dssp BTTCCTTHHHHTTSCBCCCCSSTTCCCC-CCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHH
T ss_pred CCCcchhhHHHHhCccccccccccccCC-CCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHH
Confidence 121100 0011 1222333 6899999999974 3479999999999998874
No 28
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.86 E-value=1.7e-21 Score=230.65 Aligned_cols=231 Identities=16% Similarity=0.158 Sum_probs=150.3
Q ss_pred eeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCC--CCCC
Q psy10545 923 IWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQ--YAFG 1000 (1428)
Q Consensus 923 ~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~--~~~p 1000 (1428)
.+...+|++.+.+.|++.+ |++|+++++|++|..++++ +.|++.+|+++.||.||+|+|++.+.+ |+.+ +.+|
T Consensus 104 ~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~-ll~~~~~~l~ 178 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDK-WEVSKQTGSPEQFDLIVLTMPVPEILQ-LQGDITTLIS 178 (342)
T ss_dssp EEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSS-EEEEESSSCCEEESEEEECSCHHHHTT-CBSTHHHHSC
T ss_pred ceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-EEEEECCCCEEEcCEEEECCCHHHHHH-HhcccccccC
Confidence 4567889999999998776 8999999999999998877 568888898899999999999887765 6654 3467
Q ss_pred hhHHHHHhhcCCCCceEEEEEeecCC-cCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCC-CCCcc
Q psy10545 1001 KKKYMNLIKKKMSNSLFVIYFGLSEQ-YTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLA-PTGCS 1078 (1428)
Q Consensus 1001 ~~~~~~l~~~~~~~s~~~v~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~a-p~G~~ 1078 (1428)
+...+.+.++.|. ++.+|++.++++ +.+.+...+++.. ..+..++...+.+ |.+. |++..
T Consensus 179 ~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~~~~g~~~~~----------------~~~~~~~~~~~~k-~~r~~~~~~~ 240 (342)
T 3qj4_A 179 ECQRQQLEAVSYS-SRYALGLFYEAGTKIDVPWAGQYITS----------------NPCIRFVSIDNKK-RNIESSEIGP 240 (342)
T ss_dssp HHHHHHHHTCCBC-CEEEEEEECSSCC--CCSCSEEECSS----------------CSSEEEEEEHHHH-TTCCCC-CCC
T ss_pred HHHHHHHhcCCcc-ccEEEEEEECCCCccCCceeeEEccC----------------CcceEEEEccccC-CCCCCCCCCc
Confidence 7778899999998 789999999986 3233322222211 1123444444433 4432 33334
Q ss_pred EEEEEEecCCCCCCCCCcHHHHHHHHHHHHHHHHhccCCCccCceEEEEecCcccHHHHhCCCCCccccccccccccccc
Q psy10545 1079 TFYALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWF 1158 (1428)
Q Consensus 1079 ~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~ 1158 (1428)
.+++++...... ...+.+++++.+.++++|.+ .++...+. +...+. .|. .+...+. . ..
T Consensus 241 ~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~-~~g~~~~p-~~~~v~---rW~-------~a~p~~~--~----~~ 299 (342)
T 3qj4_A 241 SLVIHTTVPFGV---TYLEHSIEDVQELVFQQLEN-ILPGLPQP-IATKCQ---KWR-------HSQVTNA--A----AN 299 (342)
T ss_dssp EEEEEECHHHHH---HTTTSCHHHHHHHHHHHHHH-HSCSCCCC-SEEEEE---EET-------TCSBSSC--C----SS
T ss_pred eEEEECCHHHHH---HhhcCCHHHHHHHHHHHHHH-hccCCCCC-ceeeec---ccc-------ccccccc--c----CC
Confidence 555555331110 11233568999999999998 77643322 222211 111 1111000 0 01
Q ss_pred CCCCCC-CCCCceEEecCCccCCCCcccccccccccccccc
Q psy10545 1159 RPHNRD-KNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1159 rp~~~t-~~i~~Ly~aGd~t~pg~gv~GA~~sg~~~a~~i~ 1198 (1428)
++.... +..+||++||||+. |.|+++|+.||+.+|+.|.
T Consensus 300 ~~~~~~~~~~~~l~laGd~~~-g~~v~~ai~sg~~aa~~i~ 339 (342)
T 3qj4_A 300 CPGQMTLHHKPFLACGGDGFT-QSNFDGCITSALCVLEALK 339 (342)
T ss_dssp SCSCEEEETTTEEEECSGGGS-CSSHHHHHHHHHHHHHHHT
T ss_pred CcceeEecCCccEEEEccccC-CCCccHHHHHHHHHHHHHH
Confidence 222221 23689999999997 7799999999999998875
No 29
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.86 E-value=9e-21 Score=228.53 Aligned_cols=327 Identities=15% Similarity=0.181 Sum_probs=219.1
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeC--------------------CeEEcccccccCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQD--------------------GFIFDAGPTVITD 769 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~--------------------G~~~d~G~~~i~~ 769 (1428)
..+||+|||+|++|+++|+.|+++|++|+|+|+++++||++.+.+.+ +|.+|.+++.+..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 46899999999999999999999999999999999999999998632 4789999998877
Q ss_pred chHHHHHHHHhcccccccceEEecCCceEEEe-------CCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHH
Q psy10545 770 PNSIKLLFDLSKNRMENYVNLLPIKPFYRLYW-------GKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVF 842 (1428)
Q Consensus 770 ~~~~~~l~~~lG~~l~~~l~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~ 842 (1428)
.+.+.+++...| +.++++|.+.+..+.+.. .+|+.+.+|.+....... ..+.+.++..+.+|+..+....
T Consensus 99 ~g~L~~lL~~~g--v~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~-~lLs~~eK~~l~kFL~~l~~~~ 175 (475)
T 3p1w_A 99 GGNLVKILKKTR--VTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVS-PLLSLMEKNRCKNFYQYVSEWD 175 (475)
T ss_dssp TSHHHHHHHHTT--CGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTC-TTSCHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHCC--chheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhc-cCCCHHHHHHHHHHHHHHHhhh
Confidence 777778888887 577899999888765543 256788888875554321 2334455666666665544321
Q ss_pred HHhhhhhcccCcccHHHHHHhhHHHHhh-cccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhH--HHH-HHHHh
Q psy10545 843 KEGYLSFASKSFLTINDMLFILPKLIKI-KAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSS--IYT-LIHAL 917 (1428)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~--~~~-~~~~~ 917 (1428)
.. ....+ ..+ ....++.+|++++..++.+..++.. .+.....++.+.++ ... +..+.
T Consensus 176 ~~--------~~~~~----------~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~ 237 (475)
T 3p1w_A 176 AN--------KRNTW----------DNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYM 237 (475)
T ss_dssp TT--------CGGGS----------TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHH
T ss_pred hc--------cchhh----------hcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHH
Confidence 11 00000 001 1257889999988888888877642 22222222222232 111 11121
Q ss_pred ---c--cccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEE-eCCeEEEEEecCCcEEEcCEEEEcCCHHHHHH
Q psy10545 918 ---E--YEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYV-NNNKVNKVHLKNGQIFDADIIVSNADIINTYR 991 (1428)
Q Consensus 918 ---~--~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~-~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~ 991 (1428)
. ......+|+||++.|+++|++.+++.|++|+++++|++|.. +++++++|++.+|+++.||+||++++...
T Consensus 238 ~Sl~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~--- 314 (475)
T 3p1w_A 238 QSISAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVM--- 314 (475)
T ss_dssp HHHHHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCT---
T ss_pred HHHhhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccc---
Confidence 1 12346799999999999999999999999999999999999 77889999999999999999999996431
Q ss_pred HhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCcCCCc---ceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCC
Q psy10545 992 NLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHLA---HHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVT 1068 (1428)
Q Consensus 992 ~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~ 1068 (1428)
.+|... .. ...+......++.++++.. ...+.+++.. ....+.+|+..-|.
T Consensus 315 ------~~p~~~----~~---~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~------------~~~~~~iy~~~~s~- 368 (475)
T 3p1w_A 315 ------HLKNKI----KK---IGQVIRCICILSNPIPETNQTNSCQIIIPQNQ------------LNRKSDIYINLVSF- 368 (475)
T ss_dssp ------TSTTSE----EE---EEEEEEEEEEESSCCTTSTTCSSEEEEECGGG------------GTSSSCEEEEEEEG-
T ss_pred ------cCcccc----cc---cceEEEEEEEEeccCcccCCCceEEEEeCCcc------------cCCCCCEEEEEECC-
Confidence 011111 00 1134555666788876543 2345554321 12234466655443
Q ss_pred CCCCCCCCccEEEEEEec
Q psy10545 1069 DLSLAPTGCSTFYALIPV 1086 (1428)
Q Consensus 1069 d~s~ap~G~~~l~v~~~~ 1086 (1428)
+...||.|+.++++.+..
T Consensus 369 ~~~~cp~G~~i~~~st~~ 386 (475)
T 3p1w_A 369 QHGVTLKGKYIAIVSATV 386 (475)
T ss_dssp GGTSSCTTCEEEEEEEEC
T ss_pred CcCcCCCCcEEEEEEeec
Confidence 356789999988888765
No 30
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.85 E-value=1.7e-21 Score=250.28 Aligned_cols=420 Identities=13% Similarity=0.115 Sum_probs=229.9
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEe-CCeEEcccccccCC--chHHHHHHHHhccccc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQ-DGFIFDAGPTVITD--PNSIKLLFDLSKNRME 785 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~-~G~~~d~G~~~i~~--~~~~~~l~~~lG~~l~ 785 (1428)
+..+||+|||||++||+||+.|++.|++|+|+|+++++||++.|... +|+.+|.|++++++ .+....+.+++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 34689999999999999999999999999999999999999999875 58999999999864 4566778899986432
Q ss_pred ccceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhH
Q psy10545 786 NYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILP 865 (1428)
Q Consensus 786 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (1428)
...........+|.... . ....... ..+..+++....... ........+......
T Consensus 414 ------~~~~~~~l~~~~g~~~~----~-~~~~~~~-------~~~~~ll~~~~~~~~----~~~~~~d~sl~~~~~--- 468 (776)
T 4gut_A 414 ------KFGERCDLIQEGGRITD----P-TIDKRMD-------FHFNALLDVVSEWRK----DKTQLQDVPLGEKIE--- 468 (776)
T ss_dssp ------ECCSCCCEECTTSCBCC----H-HHHHHHH-------HHHHHHHHHHHHHGG----GCCGGGCCBHHHHHH---
T ss_pred ------ccccccceEccCCcccc----h-hHHHHHH-------HHHHHHHHHHHHHhh----cccccccccHHHHHH---
Confidence 11122223333443211 0 0100000 011112111111110 000000111111100
Q ss_pred HHHhhcccCCHHHHHHhhcC--C----HHHHHHHHhhcccccCCCCchhHHH-HHHH-HhccccceeeecCchHHHHHHH
Q psy10545 866 KLIKIKAWKSVYSIVSQFIK--N----DYLKQAFSFNSLFIGGNPFSTSSIY-TLIH-ALEYEWGIWFPKGGVGALIKAL 937 (1428)
Q Consensus 866 ~~~~~~~~~s~~~~l~~~~~--~----~~l~~~l~~~~~~~g~~p~~~s~~~-~~~~-~~~~~~g~~~~~gG~~~l~~~L 937 (1428)
....+++.+... . ..+...........|..+...+... .... +....+....+.+|++.+.++|
T Consensus 469 --------~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aL 540 (776)
T 4gut_A 469 --------EIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKL 540 (776)
T ss_dssp --------HHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHH
T ss_pred --------HHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHH
Confidence 001111111100 0 0011111111111233333332210 0000 1112233457789999998888
Q ss_pred HHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhc-CCCCCChhHHHHHhhcCCCCce
Q psy10545 938 IKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLL-GQYAFGKKKYMNLIKKKMSNSL 1016 (1428)
Q Consensus 938 ~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll-~~~~~p~~~~~~l~~~~~~~s~ 1016 (1428)
++ |++|++|++|++|..++++ +.|++.+|+++.||+||+|+|+..+....+ -.+.+|..+.+++.++.++ ++
T Consensus 541 a~-----gl~I~l~t~V~~I~~~~~~-v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g-~~ 613 (776)
T 4gut_A 541 AE-----GLDIQLKSPVQCIDYSGDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAG-II 613 (776)
T ss_dssp HT-----TSCEESSCCEEEEECSSSS-EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEE-CC
T ss_pred Hh-----CCcEEcCCeeEEEEEcCCE-EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCe-eE
Confidence 64 7899999999999988877 568888998999999999998876653232 2467888888999999987 67
Q ss_pred EEEEEeecCCc-CC-Cc--ceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCC-ccEEEEEEecCCCCC
Q psy10545 1017 FVIYFGLSEQY-TH-LA--HHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTG-CSTFYALIPVPNLSN 1091 (1428)
Q Consensus 1017 ~~v~l~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G-~~~l~v~~~~p~~~~ 1091 (1428)
.+|++.|+++| +. .. ....++.+... ....+.+.+.. .|+| ..++..++..+..
T Consensus 614 ~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~-------------~~~~~~~~~d~------~p~g~~~vL~~~i~G~~a-- 672 (776)
T 4gut_A 614 EKIALQFPYRFWDSKVQGADFFGHVPPSAS-------------KRGLFAVFYDM------DPQKKHSVLMSVIAGEAV-- 672 (776)
T ss_dssp EEEEEECSSCTTHHHHTTCSEEEECCSSGG-------------GTTEEEEEEES------CTTSCSCEEEEEECTHHH--
T ss_pred EEEEEecCcccccccCCCCceEEeecCCcC-------------CCceEEEEecC------CCCCCceEEEEEecchhH--
Confidence 89999999984 21 00 11111211100 11222232221 2333 3455555532110
Q ss_pred CCCCcH-HHHHHHHHHHHHHHHhccCCCcc-CceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCc
Q psy10545 1092 SSINWS-EESIKLKNIVFMYLEQYCIPNLR-KKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTN 1169 (1428)
Q Consensus 1092 ~~~~~~-~~~ee~~~~vl~~L~~~~~P~l~-~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~ 1169 (1428)
..+. .+++++.+.++++|.+ +++... .......+ ..|....+ ..|+.....++.. ....+....|..++
T Consensus 673 --~~l~~lsdeel~~~~l~~L~~-ifg~~~~~~P~~~~v---t~W~~dp~-s~Gsys~~~~g~~--~~~~~~L~~p~~gr 743 (776)
T 4gut_A 673 --ASVRTLDDKQVLQQCMATLRE-LFKEQEVPDPTKYFV---TRWSTDPW-IQMAYSFVKTGGS--GEAYDIIAEDIQGT 743 (776)
T ss_dssp --HHHHTSCHHHHHHHHHHHHHH-HTTTSCCCCCSEEEE---CCGGGCTT-TCCSEEEEBTTCC--THHHHHHHCCBTTT
T ss_pred --HHHHcCCHHHHHHHHHHHHHH-HhCcccccCcceEEE---ecCCCCCc-cCCCCCccCCCCc--hhHHHHHhCcCCCc
Confidence 0121 2468899999999998 776421 11222111 12333222 2333221111110 00011112232478
Q ss_pred eEEecCCccC--CCCcccccccccccccccc
Q psy10545 1170 LYFVGAGTHP--GAANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1170 Ly~aGd~t~p--g~gv~GA~~sg~~~a~~i~ 1198 (1428)
|||||++|++ .++|+||+.||..+|..|.
T Consensus 744 L~FAGE~Ts~~~~gtveGAi~SG~RaA~~Il 774 (776)
T 4gut_A 744 VFFAGEATNRHFPQTVTGAYLSGVREASKIA 774 (776)
T ss_dssp EEECSGGGCSSSCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEehhhcCCCCcCHHHHHHHHHHHHHHHH
Confidence 9999999974 3469999999999998875
No 31
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.85 E-value=3e-20 Score=224.82 Aligned_cols=323 Identities=13% Similarity=0.090 Sum_probs=192.8
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCC-cccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGY-PNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~-~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+|++|+|+|++|+++|+.|+++|++|+|||+.+.+ +. ..|++++....+. ..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~-----------g~~~~~~~~~~~~~~~----~l------------ 57 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI-----------GSPVRCGEGLSKGILN----EA------------ 57 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST-----------TCSCCSCCEEETHHHH----HT------------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-----------CCCcccccccCHHHHH----Hc------------
Confidence 57899999999999999999999999999998755 33 3455555443221 00
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccE-EEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQ-VKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVE 468 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~ 468 (1428)
++|.. . .....++..+....+.+.. +.++.... ....+++++|..|.+.|.+++.+.| .++.+++|+
T Consensus 58 --------g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~ 126 (397)
T 3cgv_A 58 --------DIKAD-R-SFIANEVKGARIYGPSEKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKAGADVWVKSPAL 126 (397)
T ss_dssp --------TCCCC-T-TTEEEEESEEEEECTTCSSCEEEC------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEE
T ss_pred --------CCCCC-h-HHhhhhcceEEEEcCCCCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEE
Confidence 01110 0 0011112222222222222 33322111 1346889999999999999998878 688899999
Q ss_pred EEeCC--e---EEE---cCCcEEEeeEEEecCCCCCCC-----CCc----ceEEEEEEEEEecCCcCCCCceEEecccCC
Q psy10545 469 IITPT--S---IRI---NNKKIINANCIIDGRGLKNSQ-----FDG----IYQIFLGQQWNLSSPHGLDIPIIMDATVNQ 531 (1428)
Q Consensus 469 ~i~~~--~---v~l---~~g~~~~a~lvI~AdG~~S~~-----~~~----~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~ 531 (1428)
++..+ . |++ .++.+++|++||+|||.+|.. ... ..+...+..+.+...........+.++.
T Consensus 127 ~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 204 (397)
T 3cgv_A 127 GVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGS-- 204 (397)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECST--
T ss_pred EEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCC--
Confidence 88632 2 445 245689999999999999741 111 2234444444443221112222222221
Q ss_pred CCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHHHHc-CCccceeeeeeeeeecccCCchhhhhccCccc
Q psy10545 532 KNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIKN-RWKLKNIEREEIGSIPIALKNEKIIKFKKTIC 610 (1428)
Q Consensus 532 ~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~l 610 (1428)
....+|+|++|+++++++++.+....... ......+.+.+++... ++...++.....+.+|+..... ....+|+++
T Consensus 205 -~~~~g~~~~~P~~~~~~~vg~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~v~l 281 (397)
T 3cgv_A 205 -IAPAGYIWVFPKGEGMANVGIGSSINWIH-NRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKM-PITMPGLML 281 (397)
T ss_dssp -TSTTEEEEEEEEETTEEEEEEEEETTTCS-CHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCS-CCEETTEEE
T ss_pred -cCCCceEEEEECCCCeEEEEEEecccccc-CCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCcc-ceeeCCEEE
Confidence 12235789999999988888777665432 3345555566665432 2345566666778999965533 345689999
Q ss_pred ccccccccccCCCCChHHHHHHHHHHHhhccc---CCCCChhHHHHHHH-HHHHHHHhHHHHHHHHHHHhhh
Q psy10545 611 VGLRANLLHATTGYSLPIAIQLAENIAKYSIT---TNQINSTVLFKLVK-KFIINHQKKQRFFCMLNRLFFL 678 (1428)
Q Consensus 611 vGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ 678 (1428)
+|||||.++|++|||++.++..+..+++.+.+ ..+.... .++.|+ ++.....+.......+.+++..
T Consensus 282 iGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~-~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 3cgv_A 282 VGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQ-MMQKYEKLIKERFERKHLRNWVAKEKLAM 352 (397)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988666655555544432 1223333 333333 3444444444455555555544
No 32
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.82 E-value=1e-18 Score=215.91 Aligned_cols=274 Identities=12% Similarity=0.109 Sum_probs=184.5
Q ss_pred CeEEcccccccCCchHHHHHHHHhcccccccceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHH
Q psy10545 757 GFIFDAGPTVITDPNSIKLLFDLSKNRMENYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLN 836 (1428)
Q Consensus 757 G~~~d~G~~~i~~~~~~~~l~~~lG~~l~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~ 836 (1428)
+|.+|.|++.+..++.+.++|..+| +.++++|...+.. +.+.+|+...++.+....... ..+++.+...+.+|+.
T Consensus 223 ~f~~DL~PklL~~~g~lv~LL~~sg--V~~yLEFk~v~~~--y~~~~G~~~~VPas~~eif~s-~~Lsl~EKr~L~kFl~ 297 (650)
T 1vg0_A 223 RFNIDLVSKLLYSRGLLIDLLIKSN--VSRYAEFKNITRI--LAFREGTVEQVPCSRADVFNS-KQLTMVEKRMLMKFLT 297 (650)
T ss_dssp GCCEESSCCCEESSSHHHHHHHHHT--GGGGCCEEECCEE--EEESSSSEEECCCSHHHHHHC-SSSCHHHHHHHHHHHH
T ss_pred CeEEeeCCeeeeCCcHHHHHHHHcC--CcceeeEEEccce--EEecCCCEeECCCCHHHHHhC-cCCCHHHHHHHHHHHH
Confidence 3456666666666777889999999 5778899887664 345788888888887776554 4455666677777766
Q ss_pred HHHHHHHHhhhhhcccCcccHHHHHHhhHHHHhhcccCCHHHHHHhhcCCHHHHHHHHhhcccccCCCCchh-HHHHHHH
Q psy10545 837 YSKKVFKEGYLSFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFSTS-SIYTLIH 915 (1428)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~g~~p~~~s-~~~~~~~ 915 (1428)
.+.. +.. . +..+......++.+|+++++.++.++.++.......+..+.... .+..+..
T Consensus 298 ~~~~-~~~-----------~--------p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~lal~~~~~~pa~~~l~~i~~ 357 (650)
T 1vg0_A 298 FCVE-YEE-----------H--------PDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKK 357 (650)
T ss_dssp HHHT-GGG-----------C--------HHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHTTC--CCSCBHHHHHHHHHH
T ss_pred HHHH-hcc-----------C--------hHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHHhccCCCCCchhHHHHHHHH
Confidence 5543 110 0 11122224789999999999999999988753333222211111 1111122
Q ss_pred Hh---c-c-ccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeC--CeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 916 AL---E-Y-EWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNN--NKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 916 ~~---~-~-~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~--~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
++ . . ..+.+++.||++.|+++|++.+...|++|+++++|++|..++ +++++|++.+|+++.||+||++. ..
T Consensus 358 ~l~sl~~yg~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~ 435 (650)
T 1vg0_A 358 FLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SY 435 (650)
T ss_dssp HHHHTTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GG
T ss_pred HHHHHHhhccCceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hh
Confidence 22 1 1 136789999999999999999999999999999999999998 88999998889999999999944 22
Q ss_pred HHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCcCCCc---c-eEEEcCCChHHHHHHHhcCCCCCCCceEEEEe
Q psy10545 989 TYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYTHLA---H-HTIFFPSNYKKSIENIFGKNFSRDNLSIYLHS 1064 (1428)
Q Consensus 989 ~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 1064 (1428)
++. ... .+..++ .+.++.+.+++++++.. . ..+.++ ... ..++.++++.
T Consensus 436 -----lp~-----~~~---~~~~~~-~v~R~i~i~~~pi~~~~~~~~~~~iiiP-~~~------------g~~~~V~i~~ 488 (650)
T 1vg0_A 436 -----LSE-----NTC---SRVQYR-QISRAVLITDGSVLRTDADQQVSILTVP-AEE------------PGSFAVRVIE 488 (650)
T ss_dssp -----BCT-----TTT---TTCCCE-EEEEEEEEESSCSSCCSCCCCCEEEEEC-CSS------------TTSCCEEEEE
T ss_pred -----cCH-----hHh---cccccc-ceEEEEEEecCCCCCcCCCcceEEEEcc-Ccc------------CCCCCEEEEE
Confidence 221 111 122333 46788888898865321 1 233332 211 2356788888
Q ss_pred CCCCCCCCCCCCccEEEEEEe
Q psy10545 1065 PSVTDLSLAPTGCSTFYALIP 1085 (1428)
Q Consensus 1065 ~s~~d~s~ap~G~~~l~v~~~ 1085 (1428)
+|. +++.+|+|++++++.+.
T Consensus 489 ~Ss-~~~~cP~G~~Vv~lst~ 508 (650)
T 1vg0_A 489 LCS-STMTCMKGTYLVHLTCM 508 (650)
T ss_dssp ECG-GGTSSCTTCEEEEEEEE
T ss_pred eCC-CCCCCCCCCEEEEEEee
Confidence 887 88999999999988765
No 33
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.82 E-value=2.5e-19 Score=220.21 Aligned_cols=344 Identities=9% Similarity=0.060 Sum_probs=192.7
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
++|++|+|+|++|+++|+.|+++|++|+|||+.+.+ ..+.+.||+++....+. ...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~---------~~g~~~~g~~l~~~~l~----~lg----------- 61 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN---------RIGDKPCGDAVSKAHFD----KLG----------- 61 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG---------GTTCSCCCCEEEHHHHH----HTT-----------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC---------CCCcccccccccHHHHH----Hhc-----------
Confidence 358899999999999999999999999999998653 11345677777433221 110
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcc--cccccceeeechHHHHHHHHHhccCC-eEEecceE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNR--KIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTV 467 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v 467 (1428)
.+. .........+. ...+..+.... ..+..+++++|..|++.|.+++.+.| .++.+++|
T Consensus 62 ---------~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v 123 (453)
T 3atr_A 62 ---------MPY-PKGEELENKIN--------GIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTA 123 (453)
T ss_dssp ---------CCC-CCGGGEEEEEE--------EEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEE
T ss_pred ---------CCC-CchHHHHhhhc--------ceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEE
Confidence 000 00000000000 01111111111 11235788999999999999998888 78889999
Q ss_pred EEEeC--Ce---EEEc---CCc--EEEeeEEEecCCCCCCC---CC--c---------ceEEEEEEEEEecCCcCCCCce
Q psy10545 468 EIITP--TS---IRIN---NKK--IINANCIIDGRGLKNSQ---FD--G---------IYQIFLGQQWNLSSPHGLDIPI 523 (1428)
Q Consensus 468 ~~i~~--~~---v~l~---~g~--~~~a~lvI~AdG~~S~~---~~--~---------~~q~~~g~~~~~~~~~~~~~~~ 523 (1428)
+++.. +. |++. +|+ +++|++||+|||.+|.. .. . ..+.++...+.++.++......
T Consensus 124 ~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (453)
T 3atr_A 124 MKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYL 203 (453)
T ss_dssp EEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEE
T ss_pred EEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeE
Confidence 98863 23 4454 665 79999999999999762 11 0 1234444444455444322222
Q ss_pred EEecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCCCC-HHHHHHHHHHHHHHcCCccceeeeeeeeeecccCCchhh
Q psy10545 524 IMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLK-IDMLKKSIKDYAIKNRWKLKNIEREEIGSIPIALKNEKI 602 (1428)
Q Consensus 524 ~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Pl~~~~~~~ 602 (1428)
.+.+.....++ +|+|++|++++.++++.+........+ .+.+.+.+.++.. .+...+++....+.+|+..... .
T Consensus 204 ~~~~~~~~~~~--g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~p~~~~~~-~ 278 (453)
T 3atr_A 204 RIFIDQETSPG--GYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAP--DVDKSKLLVKGGALVPTRRPLY-T 278 (453)
T ss_dssp EEECCTTTSTT--SCEEEEEEETTEEEEEEEEESSSCCCCHHHHHHHHHHHHCT--TEEEEEEEEEEEEEEECSSCCS-C
T ss_pred EEEECCCCCCC--cEEEEEECCCCeEEEEEEecCCCCCCCHHHHHHHHHHhhhh--hcCCCeEEeccceeccCCCCCC-c
Confidence 12222111112 368899998888888777665432222 3444444433211 1112234444456788754332 2
Q ss_pred hhccCcccccccccccccCCCCChHHHHHHHHHHHhhccc---CCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHhhhc
Q psy10545 603 IKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT---TNQINSTVLFKLVKKFIINHQKKQRFFCMLNRLFFLS 679 (1428)
Q Consensus 603 ~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~ 679 (1428)
...+|+++||||||.++|++|||++.|+..|..+++++.. ..+.+...+..+.+++.....+.+...+.+.+++...
T Consensus 279 ~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~ 358 (453)
T 3atr_A 279 MAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKL 358 (453)
T ss_dssp SEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred eecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3568999999999999999999987666655555555432 1222222222222223333333344455566665543
Q ss_pred ccccHHHHHHHhhcCChhHhhhh
Q psy10545 680 NSRCHLDIMQYFYTLPDKIIRNF 702 (1428)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~l~~f 702 (1428)
..+. .+.+...+.++...+..+
T Consensus 359 ~~~~-~~~~~~~~~l~~~~~~~~ 380 (453)
T 3atr_A 359 SNDD-INYGMKKKIIKEEDLLEA 380 (453)
T ss_dssp CHHH-HHHHHHTTSSCHHHHHHH
T ss_pred CcHh-HHHHHHHcCCChHHHHHH
Confidence 3222 322332223555555555
No 34
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.82 E-value=3.6e-19 Score=222.83 Aligned_cols=104 Identities=11% Similarity=0.004 Sum_probs=80.6
Q ss_pred ceeeecCchHHHHHHHHHHHHHcCcEEEeCceee--EEEEeCCe------EEEE-EecCCc--EEEcCEEEEcCCHHHHH
Q psy10545 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVI--SIYVNNNK------VNKV-HLKNGQ--IFDADIIVSNADIINTY 990 (1428)
Q Consensus 922 g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~--~I~~~~~~------v~~V-~~~~G~--~i~ad~VV~A~~~~~~~ 990 (1428)
..+.+.||++.|+++|++.+.+ |+.|+++++|+ +|..++++ .+.| ...+|+ ++.||+||+|+|+..+.
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred ceeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 3568899999999999998753 67799999999 99886433 3556 456776 79999999999887764
Q ss_pred HHh----cC-----------------------CCCC-C-------hhHHHHHhhcCCCCceEEEEEee-----cCCc
Q psy10545 991 RNL----LG-----------------------QYAF-G-------KKKYMNLIKKKMSNSLFVIYFGL-----SEQY 1027 (1428)
Q Consensus 991 ~~L----l~-----------------------~~~~-p-------~~~~~~l~~~~~~~s~~~v~l~~-----~~~~ 1027 (1428)
..+ +. ++.+ | ..+.++++++.|. +..||++.+ +++|
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~-~s~Kv~l~~~~~~~~~~f 492 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMA-RSSKVFATVKTAALDQPW 492 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEE-CEEEEEEEEEGGGGGSTT
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcc-cceEEEEEEccccCCCCc
Confidence 311 21 2224 7 7888999999998 568999999 7774
No 35
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.82 E-value=2.6e-20 Score=226.08 Aligned_cols=326 Identities=10% Similarity=0.020 Sum_probs=183.0
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
.+|++|+|+|++|+++|+.|+++|++|+|+|+.+.+ +...+|.++.+.... ...
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~-----------~~~~~~~~l~~~~~~--~l~------------- 76 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI-----------KPVGAAISVWPNGVK--CMA------------- 76 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC---------------CEEEECHHHHH--HHH-------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC-----------CCcCeeEEECHHHHH--HHH-------------
Confidence 468999999999999999999999999999998755 222233444433221 111
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccC-c-cEEEcCCCc--ccccccceeeechHHHHHHHHHhccCCeEEecce
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWP-S-YQVKFPKFN--RKIFSGYYSICSKHLNSYLIRALGINNFLFNNKT 466 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~--~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~ 466 (1428)
.+++|+ .+. ....++..+..+.+. + ....++... ......++.++|..|++.|.+.+.+ ..++.+++
T Consensus 77 ------~lg~~~-~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~ 147 (407)
T 3rp8_A 77 ------HLGMGD-IME-TFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR-DSVQFGKR 147 (407)
T ss_dssp ------HTTCHH-HHH-HHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG-GGEEESCC
T ss_pred ------HCCCHH-HHH-hhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc-CEEEECCE
Confidence 111221 110 011122233333322 1 122222211 1123568899999999999999977 55788999
Q ss_pred EEEEeCC--e--EEEcCCcEEEeeEEEecCCCCCCC---C-Cc------ceEEEEEEEEEecCCcCCCCceEEecccCCC
Q psy10545 467 VEIITPT--S--IRINNKKIINANCIIDGRGLKNSQ---F-DG------IYQIFLGQQWNLSSPHGLDIPIIMDATVNQK 532 (1428)
Q Consensus 467 v~~i~~~--~--v~l~~g~~~~a~lvI~AdG~~S~~---~-~~------~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 532 (1428)
|++++.+ . |++.||++++|++||+|||.+|.. . .. ..+.++...+.+...........+.+.
T Consensus 148 v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 223 (407)
T 3rp8_A 148 VTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVG---- 223 (407)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEE----
T ss_pred EEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEEC----
Confidence 9998743 2 677889999999999999999872 1 11 112222222222222111111111111
Q ss_pred CCcceEEEEeeCCCCceEEEeEEeccC-CCCCHHHHHHHHHHHHHHcCCccceee-------eeeeeeecccCCchhhhh
Q psy10545 533 NDEYHFIYTLPLTPNSLMIEDTRYTKK-PFLKIDMLKKSIKDYAIKNRWKLKNIE-------REEIGSIPIALKNEKIIK 604 (1428)
Q Consensus 533 ~~g~~f~~~lPl~~~~~~v~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~Pl~~~~~~~~~ 604 (1428)
...++|++|++++...+........ ...+.+.+.+.+.+.+..+...+.+++ ......+|+... ....
T Consensus 224 --~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 299 (407)
T 3rp8_A 224 --EGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPF--SRLV 299 (407)
T ss_dssp --TTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCC--SCCE
T ss_pred --CCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCC--Ccee
Confidence 1246788999988776655544222 222333444555544322111111110 111445666544 2235
Q ss_pred ccCcccccccccccccCCCCChHHHHHHHHHHHhhcccCCCCChhHHHHHHHHH-HHHHHhHHHHHHHHHHHhhhccc
Q psy10545 605 FKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSITTNQINSTVLFKLVKKF-IINHQKKQRFFCMLNRLFFLSNS 681 (1428)
Q Consensus 605 ~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~f~~~~~ 681 (1428)
.+|++|||||||.++|++|||++.++..|..|++++.... +....++.|++. ...........+.+.+++.....
T Consensus 300 ~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 375 (407)
T 3rp8_A 300 RGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTR--DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDM 375 (407)
T ss_dssp ETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTH
T ss_pred cCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCH
Confidence 6899999999999999999999988888888877776432 334344444332 22222223344445566655443
No 36
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.81 E-value=6.7e-20 Score=229.77 Aligned_cols=316 Identities=11% Similarity=0.013 Sum_probs=184.6
Q ss_pred HHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeec
Q psy10545 310 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 310 ~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~ 389 (1428)
+++|+||+|+|++|+++|+.|+++|++|+|||+.+.+ ....++.++........ +
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~-----------~~~~r~~~l~~~s~~~l--~------------ 102 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP-----------VGHDRAGALHIRTVETL--D------------ 102 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC-----------CCSSSCCCBCHHHHHHH--H------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC-----------CCCceEEEECHHHHHHH--H------------
Confidence 5679999999999999999999999999999998766 33456666666543311 1
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCcc---EEEcCCCccccc-ccceeeechHHHHHHHHHhccCC-eEEec
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSY---QVKFPKFNRKIF-SGYYSICSKHLNSYLIRALGINN-FLFNN 464 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~~~~~~-~~~~~ 464 (1428)
.+++|+ .+......+.. ..+... .+.+. ..... ..++++++..|.+.|.+++.+.| .++.+
T Consensus 103 -------~lGl~~-~l~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~ 168 (570)
T 3fmw_A 103 -------LRGLLD-RFLEGTQVAKG----LPFAGIFTQGLDFG--LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRG 168 (570)
T ss_dssp -------TTTCHH-HHTTSCCBCSB----CCBTTBCTTCCBGG--GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBS
T ss_pred -------HcCChH-HHHhcCcccCC----ceeCCccccccccc--ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeC
Confidence 111222 11100000000 001111 11111 11112 24678999999999999998878 67889
Q ss_pred ceEEEEeCCe----EEE--cCC-cEEEeeEEEecCCCCCCC---------CCcceEEEEEEEEEecCCcCCCCceEEecc
Q psy10545 465 KTVEIITPTS----IRI--NNK-KIINANCIIDGRGLKNSQ---------FDGIYQIFLGQQWNLSSPHGLDIPIIMDAT 528 (1428)
Q Consensus 465 ~~v~~i~~~~----v~l--~~g-~~~~a~lvI~AdG~~S~~---------~~~~~q~~~g~~~~~~~~~~~~~~~~~~~~ 528 (1428)
++|++++.+. |++ .+| .+++|++||+|||.+|.. ...+.+.++...+.++.++ . ... +
T Consensus 169 ~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~-~--~~~--~- 242 (570)
T 3fmw_A 169 HEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE-V--PRR--W- 242 (570)
T ss_dssp CEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS-S--CCC--C-
T ss_pred CEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC-c--ceE--E-
Confidence 9999997543 555 577 689999999999999751 1235667776665555444 1 111 1
Q ss_pred cCCCCCcceEEEE-eeCCCCce-EEEeEEeccC-----CCCCHHHHHHHHHHHHHHcCCccceeeee-eeeeecccCCch
Q psy10545 529 VNQKNDEYHFIYT-LPLTPNSL-MIEDTRYTKK-----PFLKIDMLKKSIKDYAIKNRWKLKNIERE-EIGSIPIALKNE 600 (1428)
Q Consensus 529 ~~~~~~g~~f~~~-lPl~~~~~-~v~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~Pl~~~~~ 600 (1428)
...+.| ++++ +|++++.. .+........ ...+.+++.+.+.+.+ +..++..... ....||+....+
T Consensus 243 -~~~~~G--~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~a 316 (570)
T 3fmw_A 243 -ERTPDG--ILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVR---GTPLTLTEPVSWLSRFGDASRQA 316 (570)
T ss_dssp -CCCCSS--CEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSS---SCCCCCCSCCEEEEEECCCCEEC
T ss_pred -EecCCE--EEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHh---hcccccceeeeeeEEeecccccc
Confidence 111123 3455 79987765 4544433221 2234556555554432 4443332223 346788887777
Q ss_pred hhhhccCcccccccccccccCCCCChHH----HHHHHHHHHhhcccCCCCChhHHHHHHHH-HHHHHHhHHHHHHHHHHH
Q psy10545 601 KIIKFKKTICVGLRANLLHATTGYSLPI----AIQLAENIAKYSITTNQINSTVLFKLVKK-FIINHQKKQRFFCMLNRL 675 (1428)
Q Consensus 601 ~~~~~~rv~lvGdAA~~vhP~~G~G~~~----a~~la~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 675 (1428)
..+..+|++|+|||||.+||++|||++. |..|+..|+..+. + .+...+++.|++ +.....+.....+.+.++
T Consensus 317 ~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~-g--~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l 393 (570)
T 3fmw_A 317 KRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVR-G--WGSEELLDTYHDERHPVAERVLLNTRAQLAL 393 (570)
T ss_dssp SCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHH-S--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHc-C--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666799999999999999999999774 5555555554432 2 234445555544 333334444455556666
Q ss_pred hhhc
Q psy10545 676 FFLS 679 (1428)
Q Consensus 676 f~~~ 679 (1428)
|...
T Consensus 394 ~~~~ 397 (570)
T 3fmw_A 394 MRPD 397 (570)
T ss_dssp SCSC
T ss_pred hcCC
Confidence 6553
No 37
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.81 E-value=6.8e-19 Score=217.89 Aligned_cols=279 Identities=12% Similarity=0.072 Sum_probs=170.0
Q ss_pred HHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeec
Q psy10545 310 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 310 ~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~ 389 (1428)
.+.+++|+|+||+|+++|+.|+++|++|+|||+.+.+ ....++.++.+..+... .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~-----------~~~~r~~~l~~~~~~~l--~------------ 65 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR-----------TGESRGLGFTARTMEVF--D------------ 65 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC-----------CCCCCSEEECHHHHHHH--H------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCceeEECHHHHHHH--H------------
Confidence 4468899999999999999999999999999998766 33456777776543311 1
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccc-cceeeechHHHHHHHHHhccCC-eEEecceE
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFS-GYYSICSKHLNSYLIRALGINN-FLFNNKTV 467 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v 467 (1428)
.+++|+ .+... .+... ..+....+.+.. ..... ..+++++..+.+.|.+.+.+.| .++.+++|
T Consensus 66 -------~lGl~~-~~~~~--~~~~~---~~~~~~~~~~~~--~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v 130 (499)
T 2qa2_A 66 -------QRGILP-AFGPV--ETSTQ---GHFGGRPVDFGV--LEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTV 130 (499)
T ss_dssp -------HTTCGG-GGCSC--CEESE---EEETTEEEEGGG--STTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEE
T ss_pred -------HCCCHH-HHHhc--ccccc---ceecceeccccc--CCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEE
Confidence 111222 11100 00000 011111222211 11112 3588999999999999998877 78889999
Q ss_pred EEEeCCe----EEEcCCc---EEEeeEEEecCCCCCCC---C----C--cceEEEEEEEEEecCCcCCCCceEEecccCC
Q psy10545 468 EIITPTS----IRINNKK---IINANCIIDGRGLKNSQ---F----D--GIYQIFLGQQWNLSSPHGLDIPIIMDATVNQ 531 (1428)
Q Consensus 468 ~~i~~~~----v~l~~g~---~~~a~lvI~AdG~~S~~---~----~--~~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~ 531 (1428)
++++.+. |++.++. +++|++||+|||.+|.. . . .+.+.++...+.++.+.. . ..+.+.
T Consensus 131 ~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~~~~--- 204 (499)
T 2qa2_A 131 RALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITP--R-PIGETV--- 204 (499)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCCCC--E-EEEEEE---
T ss_pred EEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCCCc--c-eEEEEC---
Confidence 9997432 5666664 79999999999999751 1 1 133444555544432221 1 111111
Q ss_pred CCCcceEEEEeeCCCCceEEEeEEeccC-----CCCCHHHHHHHHHHHHHHcCCccceeeeeeeeeecccCCchhhhhcc
Q psy10545 532 KNDEYHFIYTLPLTPNSLMIEDTRYTKK-----PFLKIDMLKKSIKDYAIKNRWKLKNIEREEIGSIPIALKNEKIIKFK 606 (1428)
Q Consensus 532 ~~~g~~f~~~lPl~~~~~~v~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~ 606 (1428)
. . ++++++|++++..++........ ...+.+++.+.+.+.+ +..+..........+++....+.....+
T Consensus 205 ~-~--g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~g 278 (499)
T 2qa2_A 205 P-L--GMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLT---GQDISHGEPVWVSAFGDPARQVSAYRRG 278 (499)
T ss_dssp T-T--EEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHH---SCCCTTCEEEEEEEECCCEEECSCSEET
T ss_pred C-C--eEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHh---CCCCCccceeEEEEEeCCcEEcccccCC
Confidence 1 2 35788999887665544332211 2245677777777665 4332211111124566655545544568
Q ss_pred CcccccccccccccCCCCChHHHH----HHHHHHHhhc
Q psy10545 607 KTICVGLRANLLHATTGYSLPIAI----QLAENIAKYS 640 (1428)
Q Consensus 607 rv~lvGdAA~~vhP~~G~G~~~a~----~la~~l~~~~ 640 (1428)
||+|+|||||.++|++|||+|.++ .|+..|+..+
T Consensus 279 rv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 316 (499)
T 2qa2_A 279 RVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVV 316 (499)
T ss_dssp TEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999987544 4555555443
No 38
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.80 E-value=9.1e-19 Score=216.78 Aligned_cols=279 Identities=13% Similarity=0.054 Sum_probs=168.6
Q ss_pred HHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeec
Q psy10545 310 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 310 ~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~ 389 (1428)
.++|++|+|+||+|+++|+.|+++|++|+|||+.+.+ +...+|.++.+..+. ...
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~-----------~~~~r~~~l~~~~~~--~l~------------ 64 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER-----------TGESRGLGFTARTME--VFD------------ 64 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC------------CCCCCSEEECHHHHH--HHH------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-----------CCCCCcceECHHHHH--HHH------------
Confidence 4568999999999999999999999999999998766 344567777765433 111
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCccccc-ccceeeechHHHHHHHHHhccCC-eEEecceE
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIF-SGYYSICSKHLNSYLIRALGINN-FLFNNKTV 467 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v 467 (1428)
.+++|+ .+... .+... ..+....+.+.. .... ...+++++..+++.|.+.+.+.| .++.+++|
T Consensus 65 -------~lGl~~-~~~~~--~~~~~---~~~~~~~~~~~~--~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v 129 (500)
T 2qa1_A 65 -------QRGILP-RFGEV--ETSTQ---GHFGGLPIDFGV--LEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEV 129 (500)
T ss_dssp -------TTTCGG-GGCSC--CBCCE---EEETTEEEEGGG--STTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEE
T ss_pred -------HCCCHH-HHHhc--ccccc---ccccceeccccc--CCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEE
Confidence 111222 11100 00000 011111222211 1111 23588999999999999998877 68889999
Q ss_pred EEEeCC--e--EEEcCCc---EEEeeEEEecCCCCCCC---C----C--cceEEEEEEEEEecCCcCCCCceEEecccCC
Q psy10545 468 EIITPT--S--IRINNKK---IINANCIIDGRGLKNSQ---F----D--GIYQIFLGQQWNLSSPHGLDIPIIMDATVNQ 531 (1428)
Q Consensus 468 ~~i~~~--~--v~l~~g~---~~~a~lvI~AdG~~S~~---~----~--~~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~ 531 (1428)
++++.+ . |++.++. +++|++||+|||.+|.. . . .+.+.++...++++.+.. . ..+.+.
T Consensus 130 ~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~--- 203 (500)
T 2qa1_A 130 LSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQP--R-MIGETL--- 203 (500)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCCCC--E-EEEEEE---
T ss_pred EEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCCCC--c-eEEEEC---
Confidence 999643 3 5565664 79999999999999751 1 1 233445555544432221 1 111111
Q ss_pred CCCcceEEEEeeCCCCceEEEeEEeccC-----CCCCHHHHHHHHHHHHHHcCCccceeeeeeeeeecccCCchhhhhcc
Q psy10545 532 KNDEYHFIYTLPLTPNSLMIEDTRYTKK-----PFLKIDMLKKSIKDYAIKNRWKLKNIEREEIGSIPIALKNEKIIKFK 606 (1428)
Q Consensus 532 ~~~g~~f~~~lPl~~~~~~v~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~ 606 (1428)
. . ++++++|++++..++........ ...+.+++.+.+.+++ +..+..........|++....+.....+
T Consensus 204 ~-~--g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~g 277 (500)
T 2qa1_A 204 P-G--GMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLT---GDDIAHAEPVWVSAFGNATRQVTEYRRG 277 (500)
T ss_dssp T-T--EEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHH---SCCCTTSEEEEEEEEECCEEECSCSEET
T ss_pred C-C--cEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhc---CCCCCccceeEEEEeccCcEEccccccC
Confidence 1 2 35788999887665544332211 1235677777777665 3322210111123566655445444568
Q ss_pred CcccccccccccccCCCCChHHHHH----HHHHHHhhc
Q psy10545 607 KTICVGLRANLLHATTGYSLPIAIQ----LAENIAKYS 640 (1428)
Q Consensus 607 rv~lvGdAA~~vhP~~G~G~~~a~~----la~~l~~~~ 640 (1428)
||+|+|||||.++|++|||+|.+++ |+..|+..+
T Consensus 278 rv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~ 315 (500)
T 2qa1_A 278 RVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVV 315 (500)
T ss_dssp TEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999875544 555555443
No 39
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.77 E-value=3.7e-19 Score=211.53 Aligned_cols=248 Identities=15% Similarity=0.133 Sum_probs=165.9
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEc-ccccccCCc-hHHHHHHHHhcccccccc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFD-AGPTVITDP-NSIKLLFDLSKNRMENYV 788 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d-~G~~~i~~~-~~~~~l~~~lG~~l~~~l 788 (1428)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+....|+.++ .|++++... ..+.++++++|..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~----- 75 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEF----- 75 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESCHHHHHHHHTTSCB-----
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCCHHHHHHHHHhhhh-----
Confidence 379999999999999999999999999999999999999999999999995 999998753 3455667766631
Q ss_pred eEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHH
Q psy10545 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLI 868 (1428)
Q Consensus 789 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (1428)
.+..... ..+.+|+.+.++.+...+...+.... ...+..++.... ...
T Consensus 76 --~~~~~~~-~~~~~g~~~~~p~~~~~~~~l~~~~~---~~~~~~~l~~~~-------~~~------------------- 123 (367)
T 1i8t_A 76 --NRFTNSP-LAIYKDKLFNLPFNMNTFHQMWGVKD---PQEAQNIINAQK-------KKY------------------- 123 (367)
T ss_dssp --CCCCCCC-EEEETTEEEESSBSHHHHHHHHCCCC---HHHHHHHHHHHT-------TTT-------------------
T ss_pred --hhccccc-eEEECCeEEEcCCCHHHHHHHhccCC---HHHHHHHHHHHh-------hcc-------------------
Confidence 1112222 23446777888776544332222111 111111111110 000
Q ss_pred hhcccCCHHHHHHhhcCCHHHHHHHH-hhcccccCCCCchhHHHHH-HHH---hcc--cccee--eecCchHHHHHHHHH
Q psy10545 869 KIKAWKSVYSIVSQFIKNDYLKQAFS-FNSLFIGGNPFSTSSIYTL-IHA---LEY--EWGIW--FPKGGVGALIKALIK 939 (1428)
Q Consensus 869 ~~~~~~s~~~~l~~~~~~~~l~~~l~-~~~~~~g~~p~~~s~~~~~-~~~---~~~--~~g~~--~~~gG~~~l~~~L~~ 939 (1428)
......++.+|+.+.+..+..+.++. .....++.+|.+.++.+.. +.. ... ..+.| +|+||+++++++|++
T Consensus 124 ~~~~~~s~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~ 203 (367)
T 1i8t_A 124 GDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLE 203 (367)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHT
T ss_pred CCCCCccHHHHHHHHHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhc
Confidence 01136788999988877777777765 3456678888887753221 100 011 12334 899999999999976
Q ss_pred HHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEE
Q psy10545 940 LFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVI 1019 (1428)
Q Consensus 940 ~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v 1019 (1428)
|++|++|++|++|.. + | .+.+|+||+|+|+..++. + .+.++.|. +...+
T Consensus 204 -----g~~i~l~~~V~~i~~---~---v------~~~~D~VV~a~p~~~~~~-~------------~l~~l~y~-s~~~v 252 (367)
T 1i8t_A 204 -----GVDVKLGIDFLKDKD---S---L------ASKAHRIIYTGPIDQYFD-Y------------RFGALEYR-SLKFE 252 (367)
T ss_dssp -----TSEEECSCCGGGSHH---H---H------HTTEEEEEECSCHHHHTT-T------------TTCCCCEE-EEEEE
T ss_pred -----CCEEEeCCceeeech---h---h------hccCCEEEEeccHHHHHH-H------------hhCCCCCc-eEEEE
Confidence 689999999998851 1 2 246899999999887653 1 24466776 67778
Q ss_pred EEeecCC
Q psy10545 1020 YFGLSEQ 1026 (1428)
Q Consensus 1020 ~l~~~~~ 1026 (1428)
.+.++++
T Consensus 253 ~~~~d~~ 259 (367)
T 1i8t_A 253 TERHEFP 259 (367)
T ss_dssp EEEESSS
T ss_pred EEEeccc
Confidence 8888876
No 40
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.77 E-value=2e-19 Score=216.56 Aligned_cols=295 Identities=11% Similarity=0.057 Sum_probs=181.5
Q ss_pred cceeeecCCCcchHHHHHHHHhC-CCeEEEEccCCCCCCcceEEEe--CCeEE-cccccccCC-chHHHHHHHHhccccc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTA-GISTIILEQRDKPGGRAYVYKQ--DGFIF-DAGPTVITD-PNSIKLLFDLSKNRME 785 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~-G~~V~VlEa~~~~GGr~~s~~~--~G~~~-d~G~~~i~~-~~~~~~l~~~lG~~l~ 785 (1428)
++||+|||||++||+||++|+++ |++|+|+|+++++||+++|... +|+.+ +.|++++.. ...+.++++++|. .
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~-~- 84 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTD-F- 84 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCC-B-
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhh-h-
Confidence 68999999999999999999999 9999999999999999999998 78887 599998874 3456677777774 1
Q ss_pred ccceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhH
Q psy10545 786 NYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILP 865 (1428)
Q Consensus 786 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (1428)
.+.... ...+.+|+.+.++.+...+...+.... .......+ ........
T Consensus 85 -----~~~~~~-~~~~~~G~~~~~p~~~~~~~~l~~~~~--~~~~~~~~-------l~~~~~~~---------------- 133 (399)
T 1v0j_A 85 -----TDYRHR-VFAMHNGQAYQFPMGLGLVSQFFGKYF--TPEQARQL-------IAEQAAEI---------------- 133 (399)
T ss_dssp -----CCCCCC-EEEEETTEEEEESSSHHHHHHHHTSCC--CHHHHHHH-------HHHHGGGS----------------
T ss_pred -----hccccc-eEEEECCEEEeCCCCHHHHHHHhcccC--CHHHHHHH-------HHHHhhcc----------------
Confidence 111222 234457888888776543322221110 01111111 11100000
Q ss_pred HHHhhcccCCHHHHHHhhcCCHHHHHHHHh-hcccccCCCCchhHHHH--HHHHh--ccc--ccee--eecCchHHHHHH
Q psy10545 866 KLIKIKAWKSVYSIVSQFIKNDYLKQAFSF-NSLFIGGNPFSTSSIYT--LIHAL--EYE--WGIW--FPKGGVGALIKA 936 (1428)
Q Consensus 866 ~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~-~~~~~g~~p~~~s~~~~--~~~~~--~~~--~g~~--~~~gG~~~l~~~ 936 (1428)
......++.+|+.+.+.++..+.++.. ....++.+|.+.++... +.... ... ...+ +|+||+++++++
T Consensus 134 ---~~~~~~s~~e~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~ 210 (399)
T 1v0j_A 134 ---DTADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQN 210 (399)
T ss_dssp ---CTTC----CCHHHHHHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHH
T ss_pred ---CCCCcccHHHHHHHHHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHH
Confidence 011356788888888877777777653 34566778877765321 10000 111 1123 889999999999
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEE-EcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCc
Q psy10545 937 LIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIF-DADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNS 1015 (1428)
Q Consensus 937 L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i-~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s 1015 (1428)
|++ +.|++|++|++|++|..+ | + ++ .||+||+|+|+..+.. + .+.++.|. +
T Consensus 211 l~~---~~g~~I~l~~~V~~I~~~------v---~--~~~~aD~VI~t~p~~~l~~-~------------~l~~l~y~-s 262 (399)
T 1v0j_A 211 MAA---DHRIEVRLNTDWFDVRGQ------L---R--PGSPAAPVVYTGPLDRYFD-Y------------AEGRLGWR-T 262 (399)
T ss_dssp HTC---STTEEEECSCCHHHHHHH------H---T--TTSTTCCEEECSCHHHHTT-T------------TTCCCCEE-E
T ss_pred HHh---cCCeEEEECCchhhhhhh------h---h--hcccCCEEEECCcHHHHHh-h------------hhCCCCcc-e
Confidence 976 457999999999999632 2 1 35 7999999999887654 2 23456666 5
Q ss_pred eEEEEEeecCCcCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCC-CCCccEEEEEEe
Q psy10545 1016 LFVIYFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLA-PTGCSTFYALIP 1085 (1428)
Q Consensus 1016 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~a-p~G~~~l~v~~~ 1085 (1428)
+..+.+.++.+.- .+...++++.. + .+...++..++..|..+ |+++..++...+
T Consensus 263 ~~~~~~~~~~~~~-~~~~~~~~~~~-~--------------~~~~ri~~~~~~~~~~~~~~~~~~v~~e~~ 317 (399)
T 1v0j_A 263 LDFEVEVLPIGDF-QGTAVMNYNDL-D--------------VPYTRIHEFRHFHPERDYPTDKTVIMREYS 317 (399)
T ss_dssp EEEEEEEESSSCS-SSSSEEEECCT-T--------------SSCSEEEEGGGGCTTSCCCSSCEEEEEEEE
T ss_pred EEEEEEEEccccC-CCCeEEEeCCC-C--------------CCcceeEeecCCCCCCcCCCCCeEEEEeec
Confidence 6677888876521 12234444321 0 11122444555666665 556666665543
No 41
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.76 E-value=7.3e-19 Score=212.73 Aligned_cols=282 Identities=12% Similarity=0.053 Sum_probs=161.6
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
.|++|+|+|++|+++|+.|+++|++|+|+|+.+.+ ....++.++.+..... +..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~-----------~~~~~~~~l~~~~~~~-l~~-------------- 60 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE-----------RAINGADLLKPAGIRV-VEA-------------- 60 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC--------------CCCCEECHHHHHH-HHH--------------
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC-----------CccCceeeECchHHHH-HHH--------------
Confidence 57899999999999999999999999999998654 2334555555543221 111
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCc-cEEEcCCCcccccccceeeechHHHHHHHHHhccC-C-eEEecceEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPS-YQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGIN-N-FLFNNKTVE 468 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-~-~~~~~~~v~ 468 (1428)
+++|+ .+. ....++..+..+...+ ....++.........++.++|..|.+.|.+++.+. | .++.+++|+
T Consensus 61 ------~g~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~ 132 (399)
T 2x3n_A 61 ------AGLLA-EVT-RRGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIE 132 (399)
T ss_dssp ------TTCHH-HHH-HTTCEEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEE
T ss_pred ------cCcHH-HHH-HhCCCcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEE
Confidence 01111 000 0001111111111111 12222222222234568899999999999999887 7 688899999
Q ss_pred EEeCC------eEEEcCCcEEEeeEEEecCCCCCCC---C------C--cceE--EEEEEEEEecCCcCCCCceEEeccc
Q psy10545 469 IITPT------SIRINNKKIINANCIIDGRGLKNSQ---F------D--GIYQ--IFLGQQWNLSSPHGLDIPIIMDATV 529 (1428)
Q Consensus 469 ~i~~~------~v~l~~g~~~~a~lvI~AdG~~S~~---~------~--~~~q--~~~g~~~~~~~~~~~~~~~~~~~~~ 529 (1428)
+++.+ .|++.+|.+++||+||+|||.+|.. . . .+.+ .++...+..+.|+. . +.+.
T Consensus 133 ~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~-~~~~- 206 (399)
T 2x3n_A 133 AVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN----R-LYVD- 206 (399)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE----E-EEEC-
T ss_pred EEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc----c-EEEc-
Confidence 98642 4566788899999999999999751 1 1 2233 33332222222221 1 2222
Q ss_pred CCCCCcceEEEEeeCCCCceEEEeEEeccC-----CCCCHHHHHHHHHHHHHHcCCcc--ceeeee---eeeeecccC-C
Q psy10545 530 NQKNDEYHFIYTLPLTPNSLMIEDTRYTKK-----PFLKIDMLKKSIKDYAIKNRWKL--KNIERE---EIGSIPIAL-K 598 (1428)
Q Consensus 530 ~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~---~~~~~Pl~~-~ 598 (1428)
+. .+++|++|+++..+.+........ ...+.+.+. +.+..++..+ +.+... ....+|+.. .
T Consensus 207 ---~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (399)
T 2x3n_A 207 ---SQ-GGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLR----RRLQRFVGDESAEAIAAVTGTSRFKGIPIGYL 278 (399)
T ss_dssp ---TT-SCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHH----HHHHTTCCGGGHHHHHTCCCSTTCEECCCCCE
T ss_pred ---CC-CcEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHH----HHHhhcCCcchhhHHhcCCccceEEechhhcc
Confidence 10 235778898775544322111110 001223333 3333345555 333211 235678876 3
Q ss_pred chhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 599 NEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 599 ~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
.......+|+++||||||.++|++|||++.++..|..|++++.
T Consensus 279 ~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~ 321 (399)
T 2x3n_A 279 NLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALD 321 (399)
T ss_dssp ECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHH
Confidence 3333456899999999999999999998766665555555544
No 42
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.76 E-value=9.6e-18 Score=209.08 Aligned_cols=290 Identities=14% Similarity=0.113 Sum_probs=159.2
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+.|+||+|+|++|+++|+.|+++|++|+|||+.+.+ .. ..|.++.+......+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~-----------~~-~~g~~~~~~~~~~~l~~------------- 61 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP-----------RH-QIGESLLPATVHGICAM------------- 61 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS-----------CC-CSCCBCCHHHHTTHHHH-------------
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC-----------CC-CCCcccCcchHHHHHHH-------------
Confidence 468899999999999999999999999999998744 11 12444544321100000
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccC----ccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecc
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWP----SYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNK 465 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~ 465 (1428)
+++|+ .+.. ...+........|. .+.+.+..........+++++|..|.+.|.+.+.+.| .++.++
T Consensus 62 -------lgl~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~ 132 (512)
T 3e1t_A 62 -------LGLTD-EMKR-AGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERH 132 (512)
T ss_dssp -------TTCHH-HHHT-TTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSC
T ss_pred -------hCcHH-HHHH-cCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCC
Confidence 00110 0000 00011111111111 1233343322233446788999999999999998888 688899
Q ss_pred eEEEEeCC--e---EEE--cCCc--EEEeeEEEecCCCCCCC---CC------cceEEEEEEEEEec--CCcCCCCceEE
Q psy10545 466 TVEIITPT--S---IRI--NNKK--IINANCIIDGRGLKNSQ---FD------GIYQIFLGQQWNLS--SPHGLDIPIIM 525 (1428)
Q Consensus 466 ~v~~i~~~--~---v~l--~~g~--~~~a~lvI~AdG~~S~~---~~------~~~q~~~g~~~~~~--~~~~~~~~~~~ 525 (1428)
+|+++..+ . |++ .+|. +++|++||+|||.+|.. .. .+.+.++...+... .+.......+.
T Consensus 133 ~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 212 (512)
T 3e1t_A 133 EVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILS 212 (512)
T ss_dssp EEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEE
T ss_pred EEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEE
Confidence 99988642 2 444 3564 79999999999999762 11 12234443333321 11111111111
Q ss_pred ecccCCCCCcceEEEEeeCCCCceEEEeEEeccCC---CCCH-HHHHHHHHHH--HHH-cCCccceeeeeeeeeecccCC
Q psy10545 526 DATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKP---FLKI-DMLKKSIKDY--AIK-NRWKLKNIEREEIGSIPIALK 598 (1428)
Q Consensus 526 ~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~---~~~~-~~~~~~l~~~--~~~-~~~~~~~~~~~~~~~~Pl~~~ 598 (1428)
.+. ..+|+|++|+++++.+++........ .... +.+++.+... +.. ... ...+.....+.+++...
T Consensus 213 ~~~------~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~-~~~~~~~~~~~i~~~~~ 285 (512)
T 3e1t_A 213 AAF------QDGWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAP-ATRVTTGDYGEIRIRKD 285 (512)
T ss_dssp EEE------TTEEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTT-CEECCSSTTSSCEEEES
T ss_pred EEe------CCceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhc-Cccccccccccceeecc
Confidence 111 13478999999988777666543321 1112 2333222210 000 000 00011111122332211
Q ss_pred ---chhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 599 ---NEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 599 ---~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
.......+|+++||||||.+||++|||++.++..|..+++++.
T Consensus 286 ~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~ 331 (512)
T 3e1t_A 286 YSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAIN 331 (512)
T ss_dssp CCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHH
Confidence 1222345899999999999999999998877766666665554
No 43
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.75 E-value=4.2e-18 Score=203.63 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=165.1
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEe--CCeEE-cccccccCC-chHHHHHHHHhccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQ--DGFIF-DAGPTVITD-PNSIKLLFDLSKNRME 785 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~--~G~~~-d~G~~~i~~-~~~~~~l~~~lG~~l~ 785 (1428)
+++||+|||||++||++|+.|+++|++|+|+|+++++||++++... .|+.+ |.|++++.. ...+.++++++|.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~--- 78 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAE--- 78 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSC---
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhh---
Confidence 4579999999999999999999999999999999999999999988 78876 999999874 3455677777763
Q ss_pred ccceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhH
Q psy10545 786 NYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILP 865 (1428)
Q Consensus 786 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (1428)
+.+..... ..+.+|+.+.++.+...+...+.... .......++. . .....
T Consensus 79 ----~~~~~~~~-~~~~~g~~~~~P~~~~~~~~l~~~~~--~~~~~~~~l~-------~----~~~~~------------ 128 (384)
T 2bi7_A 79 ----MMPYVNRV-KATVNGQVFSLPINLHTINQFFSKTC--SPDEARALIA-------E----KGDST------------ 128 (384)
T ss_dssp ----EEECCCCE-EEEETTEEEEESCCHHHHHHHTTCCC--CHHHHHHHHH-------H----HSCCS------------
T ss_pred ----hcccccce-EEEECCEEEECCCChhHHHHHhcccC--CHHHHHHHHH-------H----hhhcc------------
Confidence 22222222 23456777888777644322221110 1111111111 0 00000
Q ss_pred HHHhhcccCCHHHHHHhhcCCHHHHHHHH-hhcccccCCCCchhHHHHH-HH--H-hcc--cccee--eecCchHHHHHH
Q psy10545 866 KLIKIKAWKSVYSIVSQFIKNDYLKQAFS-FNSLFIGGNPFSTSSIYTL-IH--A-LEY--EWGIW--FPKGGVGALIKA 936 (1428)
Q Consensus 866 ~~~~~~~~~s~~~~l~~~~~~~~l~~~l~-~~~~~~g~~p~~~s~~~~~-~~--~-~~~--~~g~~--~~~gG~~~l~~~ 936 (1428)
.....++.+|+.+.+.++..+.++. .....++.+|.+.++.... +. + ... ..+.+ +|+||+++++++
T Consensus 129 ----~~~~~sl~e~~~~~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~ 204 (384)
T 2bi7_A 129 ----IADPQTFEEEALRFIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKS 204 (384)
T ss_dssp ----CSSCCBHHHHHHHHHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHH
T ss_pred ----CCCCcCHHHHHHHhhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHH
Confidence 0136789999998888777777766 4556778888877753210 10 0 010 12334 899999999999
Q ss_pred HHHHHHHcCcEEEeCceee-EEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCc
Q psy10545 937 LIKLFQNLGGNLILNSQVI-SIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNS 1015 (1428)
Q Consensus 937 L~~~l~~~G~~V~~~~~V~-~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s 1015 (1428)
|++ +.|++|++|++|+ +|.. .+|+||+|+|+..++..+ +.++.|. +
T Consensus 205 l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~~~~~~~~-------------lg~l~y~-s 251 (384)
T 2bi7_A 205 ILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGPLDAFYGYQ-------------YGRLGYR-T 251 (384)
T ss_dssp HHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSCHHHHTTTT-------------TCCCCEE-E
T ss_pred HHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCCHHHHHHhh-------------cCCCCcc-e
Confidence 976 3589999999999 7841 299999999998876521 3456676 5
Q ss_pred eEEEEEeec
Q psy10545 1016 LFVIYFGLS 1024 (1428)
Q Consensus 1016 ~~~v~l~~~ 1024 (1428)
...+++.++
T Consensus 252 ~~~v~~~~d 260 (384)
T 2bi7_A 252 LDFKKFTYQ 260 (384)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEeC
Confidence 667777877
No 44
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.75 E-value=1.2e-17 Score=209.91 Aligned_cols=288 Identities=12% Similarity=0.049 Sum_probs=168.1
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+.|++|+|+|++|+++|+.|+++|++|+|||+.+.+ ....++.++........- ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~-----------~~~~~~~~l~~~~~~~l~-~l------------ 60 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL-----------SPYPRAAGQNPRTMELLR-IG------------ 60 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC-----------CCCCCSCCBCHHHHHHHH-HT------------
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-----------CCCCccceECHHHHHHHH-Hc------------
Confidence 457899999999999999999999999999998765 334566677665432111 10
Q ss_pred CCCCCceeeeccCCcCcccccccccc------cccccCccEE-----EcCC----CcccccccceeeechHHHHHHHHHh
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPL------ITYSWPSYQV-----KFPK----FNRKIFSGYYSICSKHLNSYLIRAL 455 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~------~~~~~~~~~~-----~~~~----~~~~~~~~~~~i~r~~l~~~L~~~~ 455 (1428)
++|+ .+.. ...++..+ ......+..+ .++. .....+..++.+++..|.+.|.+++
T Consensus 61 --------Gl~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a 130 (535)
T 3ihg_A 61 --------GVAD-EVVR-ADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQA 130 (535)
T ss_dssp --------TCHH-HHHH-SCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHH
T ss_pred --------CCHH-HHHh-hCCCcccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHH
Confidence 1111 0000 00000000 0001111111 1110 0011233578899999999999999
Q ss_pred ccCC-eEEecceEEEEe--CC----e--EEEcCC---cEEEeeEEEecCCCCCC---CC--C----cceEEEEEEEEEec
Q psy10545 456 GINN-FLFNNKTVEIIT--PT----S--IRINNK---KIINANCIIDGRGLKNS---QF--D----GIYQIFLGQQWNLS 514 (1428)
Q Consensus 456 ~~~~-~~~~~~~v~~i~--~~----~--v~l~~g---~~~~a~lvI~AdG~~S~---~~--~----~~~q~~~g~~~~~~ 514 (1428)
.+.| .++.+++|++++ .+ . +++.++ .+++|++||+|||.+|. .+ . .+.+..+.+.+..+
T Consensus 131 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~ 210 (535)
T 3ihg_A 131 RKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDAD 210 (535)
T ss_dssp HHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECC
T ss_pred HhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEecc
Confidence 8878 788899999986 33 4 455555 68999999999999975 11 1 23445555555544
Q ss_pred CCcCC--CCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccC-----CCCCHHHHHHHHHHHHHHcCCccceeee
Q psy10545 515 SPHGL--DIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKK-----PFLKIDMLKKSIKDYAIKNRWKLKNIER 587 (1428)
Q Consensus 515 ~~~~~--~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 587 (1428)
.++.. ....++.+.. . .+ ..+++|++++..+.....+... ...+.+.+.+.+.+.+ +.....+..
T Consensus 211 ~~~~~~~~~~~~~~~~~--p-~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~---~~~~~~~~~ 282 (535)
T 3ihg_A 211 LSGIMEPGTTGWYYLHH--P-EF--KGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLAL---DAPEVKPEL 282 (535)
T ss_dssp GGGTSCTTCCEEEEEEC--S-SC--EEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHH---TCSSCCCEE
T ss_pred ChhhccCCceEEEEEEC--C-Cc--eEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHh---CCCCCceeE
Confidence 33321 1112222211 1 22 2456787764333222222221 1234567777777665 433333333
Q ss_pred eeeeeecccCCchhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhc
Q psy10545 588 EEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYS 640 (1428)
Q Consensus 588 ~~~~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~ 640 (1428)
.....+|+....+.....+|++|+|||||.++|++|||++.++..|..|+..+
T Consensus 283 ~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~L 335 (535)
T 3ihg_A 283 VDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKL 335 (535)
T ss_dssp EEEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHH
T ss_pred EEeeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHH
Confidence 33556777666666556699999999999999999999775544444444433
No 45
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.73 E-value=3.3e-17 Score=199.79 Aligned_cols=289 Identities=13% Similarity=0.026 Sum_probs=162.6
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
.|++|+|+|++|+++|+.|+++|++|+|+|+.+.+ + ..+|.++.+..... +...
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~-----------~-~~~g~~~~~~~~~~-l~~~------------- 59 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP-----------R-FVIGESLLPRCMEH-LDEA------------- 59 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS-----------C-CCSCCBCCGGGHHH-HHHT-------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC-----------C-CcccCcccHhHHHH-HHHc-------------
Confidence 57899999999999999999999999999998654 1 12333443322110 0000
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCc--cEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPS--YQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVE 468 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~ 468 (1428)
++|+ .+.... .+........|.. ..+.+...........+.++|..|++.|.+.+.+.| .++.+++|+
T Consensus 60 -------g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~ 130 (421)
T 3nix_A 60 -------GFLD-AVKAQG-FQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVT 130 (421)
T ss_dssp -------TCHH-HHHHTT-CEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEE
T ss_pred -------CChH-HHHHcC-CcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEE
Confidence 0010 000000 0000001111222 223333222222345788999999999999998878 688899999
Q ss_pred EEeCC--e----EEEcCCc--EEEeeEEEecCCCCCCC---C------CcceEEEEEEEEEecCCcC--CCCceEEeccc
Q psy10545 469 IITPT--S----IRINNKK--IINANCIIDGRGLKNSQ---F------DGIYQIFLGQQWNLSSPHG--LDIPIIMDATV 529 (1428)
Q Consensus 469 ~i~~~--~----v~l~~g~--~~~a~lvI~AdG~~S~~---~------~~~~q~~~g~~~~~~~~~~--~~~~~~~~~~~ 529 (1428)
++..+ . +...+|. +++|++||+|||.+|.. . ..+.+.++...+....+.. ....+.+.+..
T Consensus 131 ~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (421)
T 3nix_A 131 DIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVV 210 (421)
T ss_dssp EEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEE
T ss_pred EEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEe
Confidence 88642 2 3446777 69999999999998741 1 1123344444433322211 11111222211
Q ss_pred CCCCCcceEEEEeeCCCCceEEEeEEeccCC---CCCHHHHHHHHHHHHHHcCCccc---eee-eeeeeeecccCCchhh
Q psy10545 530 NQKNDEYHFIYTLPLTPNSLMIEDTRYTKKP---FLKIDMLKKSIKDYAIKNRWKLK---NIE-REEIGSIPIALKNEKI 602 (1428)
Q Consensus 530 ~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~---~~~-~~~~~~~Pl~~~~~~~ 602 (1428)
. .+.+|+|++|+++++++++.+...... ..+.+++ +.+++........ ... ......+|........
T Consensus 211 ~---~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 284 (421)
T 3nix_A 211 H---KPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEER---MRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASK 284 (421)
T ss_dssp E---ETTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHH---HHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESC
T ss_pred C---CCCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHH---HHHHHHhCcHHHHHHhcCccccCceeecccceeeee
Confidence 1 234578999999998888776544321 1133333 2333322121111 111 1122344544443333
Q ss_pred hhccCcccccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 603 IKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 603 ~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
...+++++||||||.++|++|||++.|+..|..+++++.
T Consensus 285 ~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~ 323 (421)
T 3nix_A 285 LYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAV 323 (421)
T ss_dssp SEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred eccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHH
Confidence 456899999999999999999998866666666665554
No 46
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.71 E-value=1.8e-16 Score=202.33 Aligned_cols=322 Identities=11% Similarity=0.056 Sum_probs=174.9
Q ss_pred HHHHHHhcCCchHHHHHHHHhh-----cCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEE
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQT-----AGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVL 385 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~-----~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~ 385 (1428)
+.|++|+|+||+|+++|+.|++ .|++|+|||+++.+ ....++.|+.+..+. +..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~-----------~~~gra~~l~~~tle--~l~-------- 66 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK-----------VYNGQADGLQCRTLE--SLK-------- 66 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC-----------CCSCSCCEECHHHHH--HHH--------
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC-----------CCCCceeEEChHHHH--HHH--------
Confidence 3578999999999999999999 99999999998755 223345566655332 111
Q ss_pred EeecCCCCCCceeeeccCCcCcccccccccccccccCc-cEE----EcCCCcccc-cccceeeechHHHHHHHHHhccCC
Q psy10545 386 LLELSSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPS-YQV----KFPKFNRKI-FSGYYSICSKHLNSYLIRALGINN 459 (1428)
Q Consensus 386 ~l~~~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~-~~~~~~i~r~~l~~~L~~~~~~~~ 459 (1428)
.+++|+ .+. ....++..+..+.... ..+ .++...... ....+++++..+++.|.+.+.+.|
T Consensus 67 -----------~lGl~~-~l~-~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g 133 (665)
T 1pn0_A 67 -----------NLGLAD-KIL-SEANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEIS 133 (665)
T ss_dssp -----------TTTCHH-HHH-TTCBCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHH
T ss_pred -----------HCCCHH-HHH-HhccccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcC
Confidence 111221 010 0111222222222110 111 121111111 224577999999999999997643
Q ss_pred ----eEEecceEEEEeCC----------e--EEEc------------------------------------------CC-
Q psy10545 460 ----FLFNNKTVEIITPT----------S--IRIN------------------------------------------NK- 480 (1428)
Q Consensus 460 ----~~~~~~~v~~i~~~----------~--v~l~------------------------------------------~g- 480 (1428)
.+..+++|++++.+ . |++. +|
T Consensus 134 ~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~ 213 (665)
T 1pn0_A 134 DTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGE 213 (665)
T ss_dssp TTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTC
T ss_pred CCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCc
Confidence 58888999888532 2 3332 35
Q ss_pred -cEEEeeEEEecCCCCCCC---C--C----cceEEEEEEEEEecCCcCCCC-ceEEecccCCCCCcceEEEEeeCCCCce
Q psy10545 481 -KIINANCIIDGRGLKNSQ---F--D----GIYQIFLGQQWNLSSPHGLDI-PIIMDATVNQKNDEYHFIYTLPLTPNSL 549 (1428)
Q Consensus 481 -~~~~a~lvI~AdG~~S~~---~--~----~~~q~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~f~~~lPl~~~~~ 549 (1428)
.+++|++||+|||.+|.. + . .+.+....+.+.......... ...+.. . ..++++++|++++..
T Consensus 214 ~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~----~--~~g~~~~~P~~~~~~ 287 (665)
T 1pn0_A 214 IETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHS----A--ESGSIMIIPRENNLV 287 (665)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTSEEEEEC----S--SSCEEEEEECSTTCE
T ss_pred eEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcceEEEEEe----C--CCceEEEEEcCCCEE
Confidence 469999999999999861 1 1 122222223332222221111 111111 0 123467889988765
Q ss_pred EEEeEEecc--------CCCCCHHHHHHHHHHHHHHcCCccceeeeee-eeeecccCCchhhhh-ccCcccccccccccc
Q psy10545 550 MIEDTRYTK--------KPFLKIDMLKKSIKDYAIKNRWKLKNIEREE-IGSIPIALKNEKIIK-FKKTICVGLRANLLH 619 (1428)
Q Consensus 550 ~v~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~Pl~~~~~~~~~-~~rv~lvGdAA~~vh 619 (1428)
.+....... ....+.+++.+.+.+.+ +....++.... ...+|+....+..+. .+||+|+|||||.++
T Consensus 288 r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~ 364 (665)
T 1pn0_A 288 RFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIF---HPYTFDVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHS 364 (665)
T ss_dssp EEEEEECC----------CCCCHHHHHHHHHHHH---TTSCCEEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECC
T ss_pred EEEEEeCCccccccccCcCCCCHHHHHHHHHHHh---CcccCceeeEEEEEeeeccceehhhcccCCCEEEEECccccCC
Confidence 553332211 12235677777776655 22112232222 356776655555444 589999999999999
Q ss_pred cCCCCChHHH----HHHHHHHHhhcccCCCCChhHHHHHHHH-HHHHHHhHHHHHHHHHHHhhh
Q psy10545 620 ATTGYSLPIA----IQLAENIAKYSITTNQINSTVLFKLVKK-FIINHQKKQRFFCMLNRLFFL 678 (1428)
Q Consensus 620 P~~G~G~~~a----~~la~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~f~~ 678 (1428)
|.+|||+|.+ ..|+..|+..+. +. ....+++.|++ +.....+...+.+.+.++|..
T Consensus 365 P~~GqG~N~gi~DA~nLawkLa~vl~-g~--a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~ 425 (665)
T 1pn0_A 365 PKAGQGMNTSMMDTYNLGWKLGLVLT-GR--AKRDILKTYEEERQPFAQALIDFDHQFSRLFSG 425 (665)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHT-TC--BCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CcccCCcchhHHHHHHHHHHHHHHHc-CC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999998754 445555554432 22 23334444433 223333333344455555544
No 47
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.71 E-value=2.1e-16 Score=186.33 Aligned_cols=321 Identities=13% Similarity=0.119 Sum_probs=192.7
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCCc-hHHHHHHHHhcccccccce
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDP-NSIKLLFDLSKNRMENYVN 789 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~~-~~~~~l~~~lG~~l~~~l~ 789 (1428)
++||+|||||++||++|+.|+++|.+|+|||+++.+||++.+....+..+|.|..++... ..+.++++.+... ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 77 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ--GH-- 77 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH--TS--
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC--CC--
Confidence 479999999999999999999999999999999999999999999999999998877642 2333444433210 00
Q ss_pred EEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHHHHh
Q psy10545 790 LLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLIK 869 (1428)
Q Consensus 790 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (1428)
... +. +........
T Consensus 78 ~~~--------~~-~~~~~~~~~--------------------------------------------------------- 91 (336)
T 1yvv_A 78 VAE--------WT-PLLYNFHAG--------------------------------------------------------- 91 (336)
T ss_dssp EEE--------EC-CCEEEESSS---------------------------------------------------------
T ss_pred eee--------cc-ccceeccCc---------------------------------------------------------
Confidence 000 00 000000000
Q ss_pred hcccCCHHHHHHhhcCCHHHHHHHHhhcccccCCCCchhHHHHHHHHhccccceeeecCchHHHHHHHHHHHHHcCcEEE
Q psy10545 870 IKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFSTSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLI 949 (1428)
Q Consensus 870 ~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~g~~p~~~s~~~~~~~~~~~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~ 949 (1428)
...+.. .....+....|++.+.+.+.+ |++|+
T Consensus 92 -------------------------------~~~~~~------------~~~~~~~~~~~~~~l~~~l~~-----g~~i~ 123 (336)
T 1yvv_A 92 -------------------------------RLSPSP------------DEQVRWVGKPGMSAITRAMRG-----DMPVS 123 (336)
T ss_dssp -------------------------------BCCCCC------------TTSCEEEESSCTHHHHHHHHT-----TCCEE
T ss_pred -------------------------------ccccCC------------CCCccEEcCccHHHHHHHHHc-----cCcEE
Confidence 000000 000123445678887777755 78999
Q ss_pred eCceeeEEEEeCCeEEEEEecCCcEEE-cCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCcC
Q psy10545 950 LNSQVISIYVNNNKVNKVHLKNGQIFD-ADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQYT 1028 (1428)
Q Consensus 950 ~~~~V~~I~~~~~~v~~V~~~~G~~i~-ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~~ 1028 (1428)
++++|++|..++++ +.|++.+|+.+. ||.||+|+|+..+.+ ++.. .+.....+..+.|. +..++++.+++++.
T Consensus 124 ~~~~v~~i~~~~~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~-~~~~---~~~l~~~~~~~~~~-~~~~~~~~~~~~~~ 197 (336)
T 1yvv_A 124 FSCRITEVFRGEEH-WNLLDAEGQNHGPFSHVIIATPAPQAST-LLAA---APKLASVVAGVKMD-PTWAVALAFETPLQ 197 (336)
T ss_dssp CSCCEEEEEECSSC-EEEEETTSCEEEEESEEEECSCHHHHGG-GGTT---CHHHHHHHTTCCEE-EEEEEEEEESSCCS
T ss_pred ecCEEEEEEEeCCE-EEEEeCCCcCccccCEEEEcCCHHHHHH-hhcc---CHHHHHHHhhcCcc-ceeEEEEEecCCCC
Confidence 99999999988876 568888997765 999999999887776 4432 23445677888888 78899999998742
Q ss_pred CCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecCCCCCCCCCcHHHHHHHHHHHH
Q psy10545 1029 HLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLSNSSINWSEESIKLKNIVF 1108 (1428)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p~~~~~~~~~~~~~ee~~~~vl 1108 (1428)
.+....++. +.+..++...+. .|...+.+ ..+.++....... ...+.+++++.+.++
T Consensus 198 -~~~~~~~~~-----------------~~~~~~l~~~~~-~p~~~~~~-~~~v~~~~~~~~~---~~~~~~~~~~~~~l~ 254 (336)
T 1yvv_A 198 -TPMQGCFVQ-----------------DSPLDWLARNRS-KPERDDTL-DTWILHATSQWSR---QNLDASREQVIEHLH 254 (336)
T ss_dssp -CCCCEEEEC-----------------SSSEEEEEEGGG-STTCCCSS-EEEEEEECHHHHH---HTTTSCHHHHHHHHH
T ss_pred -CCCCeEEeC-----------------CCceeEEEecCc-CCCCCCCC-cEEEEEeCHHHHH---HHHhCCHHHHHHHHH
Confidence 222222221 123344443332 23333322 2333333211000 011224578888999
Q ss_pred HHHHhccCCCccCceEEEEecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCceEEecCCccCCCCcccccc
Q psy10545 1109 MYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKA 1188 (1428)
Q Consensus 1109 ~~L~~~~~P~l~~~i~~~~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~t~pg~gv~GA~~ 1188 (1428)
+.+.+ .++.-......... ..|. +........ .+.... ..++|+||||+++ |.|+++|+.
T Consensus 255 ~~l~~-~lg~~~~~p~~~~~---~rw~----------~a~~~~~~~----~~~~~~-~~~rl~laGDa~~-g~gv~~a~~ 314 (336)
T 1yvv_A 255 GAFAE-LIDCTMPAPVFSLA---HRWL----------YARPAGAHE----WGALSD-ADLGIYVCGDWCL-SGRVEGAWL 314 (336)
T ss_dssp HHHHT-TCSSCCCCCSEEEE---EEEE----------EEEESSCCC----CSCEEE-TTTTEEECCGGGT-TSSHHHHHH
T ss_pred HHHHH-HhCCCCCCCcEEEc---cccC----------ccCCCCCCC----CCeeec-CCCCEEEEecCCC-CCCHHHHHH
Confidence 99997 55321111111110 0000 000000000 000111 2589999999998 669999999
Q ss_pred cccccccccc
Q psy10545 1189 GSKSFSSAIK 1198 (1428)
Q Consensus 1189 sg~~~a~~i~ 1198 (1428)
||..+|+.|.
T Consensus 315 sg~~lA~~l~ 324 (336)
T 1yvv_A 315 SGQEAARRLL 324 (336)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 48
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.70 E-value=2.1e-17 Score=198.24 Aligned_cols=284 Identities=13% Similarity=0.052 Sum_probs=158.6
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
.+++|+|+|++|+++|+.|+++|++|+|+|+.+.+ +...+|.++.+.... ....
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~-----------~~~~~~~~l~~~~~~--~l~~------------- 65 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL-----------RAFGAGIYLWHNGLR--VLEG------------- 65 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC-----------CCCSSEEEEEHHHHH--HHHH-------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC-----------CCCCceEEeCccHHH--HHHH-------------
Confidence 57899999999999999999999999999998765 222334444443221 1000
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
+++|+ .+.. ...++..+...........++.. ..+++.++|..|.+.|.+.+.+.| .++.+++|+++
T Consensus 66 ------~g~~~-~~~~-~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i 133 (379)
T 3alj_A 66 ------LGALD-DVLQ-GSHTPPTYETWMHNKSVSKETFN----GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAA 133 (379)
T ss_dssp ------TTCHH-HHHT-TCBCCSCEEEEETTEEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEE
T ss_pred ------cCCHH-HHHh-hCCCccceEEEeCCceeeeccCC----CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 11111 0000 00111111111111111111110 235789999999999999998877 68889999998
Q ss_pred eCC-eEEEcCCcEEEeeEEEecCCCCCCC---CC-cceEEEEE---EEEEecC-----CcCCCC-ce-EE-ecccCCCCC
Q psy10545 471 TPT-SIRINNKKIINANCIIDGRGLKNSQ---FD-GIYQIFLG---QQWNLSS-----PHGLDI-PI-IM-DATVNQKND 534 (1428)
Q Consensus 471 ~~~-~v~l~~g~~~~a~lvI~AdG~~S~~---~~-~~~q~~~g---~~~~~~~-----~~~~~~-~~-~~-~~~~~~~~~ 534 (1428)
+.+ .|++.||.+++||+||+|||.+|.. .. .......+ +...+.. ++.... .. .+ .+.
T Consensus 134 ~~~~~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 207 (379)
T 3alj_A 134 DPVGRLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWP------ 207 (379)
T ss_dssp ETTTEEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSS------
T ss_pred EeCCEEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEEC------
Confidence 643 5778888899999999999999751 11 11112222 1111222 332111 11 11 111
Q ss_pred cceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHHHHcCCccceeee----eeeeeecccCC-chhhhhccCcc
Q psy10545 535 EYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIKNRWKLKNIER----EEIGSIPIALK-NEKIIKFKKTI 609 (1428)
Q Consensus 535 g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~Pl~~~-~~~~~~~~rv~ 609 (1428)
.-+++|++|++++...+..+...... +.+.+.+.+..+..... .+.+++. .+...+|+... .......+|++
T Consensus 208 ~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~ 284 (379)
T 3alj_A 208 RVQRILYSPCNENELYLGLMAPAADP--RGSSVPIDLEVWVEMFP-FLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVA 284 (379)
T ss_dssp SCCEEEEEECSSSEEEEEEEECTTCT--TTTCSSCCHHHHHHHCG-GGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEE
T ss_pred CCCEEEEEECCCCcEEEEEEecCCCC--CHHHHHHHHhcCCchhc-cHHHHHhhCCccceEEecccccCCCCCcccCcEE
Confidence 12467889999887665444322111 01112222222211111 0001100 01112233221 11222458999
Q ss_pred cccccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 610 CVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 610 lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
+||||||.++|++|||++.++..|..|++.+..
T Consensus 285 lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~ 317 (379)
T 3alj_A 285 LVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE 317 (379)
T ss_dssp ECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTS
T ss_pred EEEcccCCCCcchhhhHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988888888764
No 49
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.70 E-value=6.6e-18 Score=204.00 Aligned_cols=290 Identities=11% Similarity=0.032 Sum_probs=154.3
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
.|++|+|+|++|+++|+.|+++|++|+|+|+.+.+.. ..+.+++++.+.... .+..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~---------~~~~~~g~l~~~~~~-~l~~-------------- 58 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYV---------LGRIRAGVLEQGMVD-LLRE-------------- 58 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHH---------HTCCCCCEECHHHHH-HHHH--------------
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcc---------cCCCceEeECHHHHH-HHHH--------------
Confidence 4688999999999999999999999999998764200 012344455544322 1111
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
+++|+ .+. ....++..+..+. ......++.........++++++..+.+.|.+.+.+.| .++.+++|+++
T Consensus 59 ------lg~~~-~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i 129 (394)
T 1k0i_A 59 ------AGVDR-RMA-RDGLVHEGVEIAF-AGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRL 129 (394)
T ss_dssp ------TTCCH-HHH-HHCEEESCEEEEE-TTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEE
T ss_pred ------cCCcH-HHH-hcCCccceEEEEE-CCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEE
Confidence 11111 010 0011112111111 11111111100011235678899999999999998777 68889999999
Q ss_pred eCC--e---EEE-cCCc--EEEeeEEEecCCCCCCC---CCcc----eEEE--EEEE-EEecCCcCCCCceEEecccCCC
Q psy10545 471 TPT--S---IRI-NNKK--IINANCIIDGRGLKNSQ---FDGI----YQIF--LGQQ-WNLSSPHGLDIPIIMDATVNQK 532 (1428)
Q Consensus 471 ~~~--~---v~l-~~g~--~~~a~lvI~AdG~~S~~---~~~~----~q~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~ 532 (1428)
+.+ + |++ .+|. +++||+||+|||.+|.. .... .... ..+. +....+..... .++.. .
T Consensus 130 ~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~ 204 (394)
T 1k0i_A 130 HDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHE-LIYAN----H 204 (394)
T ss_dssp ECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSS-CEEEC----C
T ss_pred EEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccc-eEEEE----c
Confidence 742 2 666 6787 79999999999999872 1110 1111 1111 11122221111 11111 1
Q ss_pred CCcceEEEEeeCCCCceEEEeEEeccC--CCCCHHHHHHHHHHHHHH-cCCccceeeeeeeeeecccCCchhhhhccCcc
Q psy10545 533 NDEYHFIYTLPLTPNSLMIEDTRYTKK--PFLKIDMLKKSIKDYAIK-NRWKLKNIEREEIGSIPIALKNEKIIKFKKTI 609 (1428)
Q Consensus 533 ~~g~~f~~~lPl~~~~~~v~~~~~~~~--~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~ 609 (1428)
+.+ |+|+.|..++...+........ ...+.+.+.+.+.+.+.. .++.+..........+|+..........+|++
T Consensus 205 ~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grv~ 282 (394)
T 1k0i_A 205 PRG--FALCSQRSATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGRLF 282 (394)
T ss_dssp TTC--CEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEECSEETTEE
T ss_pred CCc--eEEEEecCCCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccccccCCEE
Confidence 123 3444555555544433322211 112344444444443211 01011000111235667765544434568999
Q ss_pred cccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 610 CVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 610 lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
|||||||.+||++|||++.++..|..|++++.
T Consensus 283 LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~ 314 (394)
T 1k0i_A 283 LAGDAAHIVPPTGAKGLNLAASDVSTLYRLLL 314 (394)
T ss_dssp ECGGGTEECCGGGTCHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCCCcccchHHHHHHHHHHHHHHHH
Confidence 99999999999999998765555555555443
No 50
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.69 E-value=7.6e-17 Score=190.97 Aligned_cols=289 Identities=14% Similarity=0.156 Sum_probs=188.7
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEE-eCCeEE-cccccccCC-chHHHHHHHHhcccccc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYK-QDGFIF-DAGPTVITD-PNSIKLLFDLSKNRMEN 786 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~-~~G~~~-d~G~~~i~~-~~~~~~l~~~lG~~l~~ 786 (1428)
.++||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+ |.|+|++.. ...+.++++++|.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~---- 103 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTE---- 103 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCC----
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhh----
Confidence 468999999999999999999999999999999999999999987 678875 999999874 4566778888773
Q ss_pred cceEEecCCceEEEeCCCcEEEecCCHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHhhhhhcccCcccHHHHHHhhHH
Q psy10545 787 YVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPK 866 (1428)
Q Consensus 787 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1428)
+.+... ....+.+|+.+++|.+...+.. +... +........++. .. ..
T Consensus 104 ---~~~~~~-~~~~~~~g~l~~lP~~~~~~~~-l~~~-~~~~~~~~~~l~------~~------~~-------------- 151 (397)
T 3hdq_A 104 ---WRPYQH-RVLASVDGQLLPIPINLDTVNR-LYGL-NLTSFQVEEFFA------SV------AE-------------- 151 (397)
T ss_dssp ---EEECCC-BEEEEETTEEEEESCCHHHHHH-HHTC-CCCHHHHHHHHH------HH------CC--------------
T ss_pred ---cccccc-cceEEECCEEEEcCCChHHHHH-hhcc-CCCHHHHHHHHh------hc------cc--------------
Confidence 222222 2234557888898877543322 1111 011111111111 00 00
Q ss_pred HHhhcccCCHHHHHHhhcCCHHHHHHHH-hhcccccCCCCchhHH-HHHHHHh---ccc--cce--eeecCchHHHHHHH
Q psy10545 867 LIKIKAWKSVYSIVSQFIKNDYLKQAFS-FNSLFIGGNPFSTSSI-YTLIHAL---EYE--WGI--WFPKGGVGALIKAL 937 (1428)
Q Consensus 867 ~~~~~~~~s~~~~l~~~~~~~~l~~~l~-~~~~~~g~~p~~~s~~-~~~~~~~---~~~--~g~--~~~~gG~~~l~~~L 937 (1428)
......++.+|+.+.++.+..+.++. +....++.+|.++++. ...+... +.. .+. .+|+||+.++++.|
T Consensus 152 --~~~~~~s~~e~~~~~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l 229 (397)
T 3hdq_A 152 --KVEQVRTSEDVVVSKVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNM 229 (397)
T ss_dssp --CCSSCCBHHHHHHHHHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHH
T ss_pred --CCCCCcCHHHHHHHhcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHH
Confidence 01236899999999988888888877 4556778888888752 1111000 000 122 36999999999998
Q ss_pred HHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceE
Q psy10545 938 IKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLF 1017 (1428)
Q Consensus 938 ~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~ 1017 (1428)
++ ..|++|++|++|+++ +.++.+|+||+|+|+..+.. ....++.|. |+.
T Consensus 230 ~~---~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~~~-------------~~~g~L~yr-sl~ 278 (397)
T 3hdq_A 230 LS---SPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAFFD-------------FCYGKLPYR-SLE 278 (397)
T ss_dssp TC---STTEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHHTT-------------TTTCCCCEE-EEE
T ss_pred Hh---ccCCEEEECCeEEec--------------cccccCCEEEEcCCHHHHHH-------------HhcCCCCCc-eEE
Confidence 54 458999999999833 34567999999998776532 124456676 677
Q ss_pred EEEEeecCC-cCCCcceEEEcCCChHHHHHHHhcCCCCCCCceEEEEeCCCCCCCCCCCCccEEEEEEecC
Q psy10545 1018 VIYFGLSEQ-YTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVP 1087 (1428)
Q Consensus 1018 ~v~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~d~s~ap~G~~~l~v~~~~p 1087 (1428)
.++++++.+ +. +.+++.++++ + |...++.+++. +.. +.++++++...+++
T Consensus 279 ~~~~~~~~~~~~--~~~~vn~~d~---------------~-p~tRi~e~k~~-~~~-~~~~t~i~~Ey~~~ 329 (397)
T 3hdq_A 279 FRHETHDTEQLL--PTGTVNYPND---------------Y-AYTRVSEFKHI-TGQ-RHHQTSVVYEYPRA 329 (397)
T ss_dssp EEEEEESSSCSC--SSSEEECSSS---------------S-SCSEEEEHHHH-HCC-CCSSEEEEEEEEES
T ss_pred EEEEEeccccCC--CCeEEEeCCC---------------C-cceEEEeeccc-CCC-CCCCEEEEEEECCC
Confidence 888899866 32 3445665421 2 34445544443 222 44677777776663
No 51
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.69 E-value=2.1e-17 Score=200.76 Aligned_cols=153 Identities=21% Similarity=0.158 Sum_probs=90.3
Q ss_pred HHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHH-HhcCCCceEEEeecCCC
Q psy10545 314 RIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYL-KQYNPKLNVLLLELSSS 392 (1428)
Q Consensus 314 ~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~-~~~~~~~rv~~l~~~s~ 392 (1428)
++|+|+||+|+++|+.|+++|++|+|+|+.+.+ ....+|+|+...+...+. ....+.-....+.....
T Consensus 4 V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~-----------~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~ 72 (412)
T 4hb9_A 4 VGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA-----------SSILPGYGIHINSFGKQALQECLPAENWLAFEEASR 72 (412)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS-----------CSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCE
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC-----------CcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhc
Confidence 579999999999999999999999999998766 445567777543333222 11111000000000000
Q ss_pred CCCceeeeccCCcCcccccccccccccccCccEEEcC-----CCcccccccceeeechHHHHHHHHHhccCCeEEecceE
Q psy10545 393 VKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFP-----KFNRKIFSGYYSICSKHLNSYLIRALGINNFLFNNKTV 467 (1428)
Q Consensus 393 ~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~v 467 (1428)
.......++. .....+... ..........+.|+|..|.+.|.+.+.. .+.++++|
T Consensus 73 ~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~--~v~~~~~v 132 (412)
T 4hb9_A 73 YIGGQSRFYN------------------ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLAN--TIQWNKTF 132 (412)
T ss_dssp EECCCCEEEC------------------TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTT--TEECSCCE
T ss_pred ccCcceeEec------------------CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccc--eEEEEEEE
Confidence 0000000000 000001000 0011122356789999999999887643 47788999
Q ss_pred EEEeC--Ce---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 468 EIITP--TS---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 468 ~~i~~--~~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
++++. ++ |++.||.+++||+||||||.+|.
T Consensus 133 ~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 133 VRYEHIENGGIKIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp EEEEECTTSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred EeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcc
Confidence 98863 22 67889999999999999999986
No 52
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.68 E-value=4.8e-17 Score=204.06 Aligned_cols=290 Identities=14% Similarity=0.175 Sum_probs=157.3
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+.|+||+|+|++|+++|+.|+++|++|+|||+.+.+ +. .+|.++.+..... +...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~-----------~~-~~G~~l~p~~~~~-l~~l------------ 77 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP-----------RY-RVGESLLPGTMSI-LNRL------------ 77 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS-----------CC-CCCCBCCHHHHHH-HHHT------------
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC-----------CC-ceeeeECHHHHHH-HHHc------------
Confidence 368999999999999999999999999999998654 11 2345555543321 1110
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccC----ccEEEcCCCccc--ccccceeeechHHHHHHHHHhccCC-eEEe
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWP----SYQVKFPKFNRK--IFSGYYSICSKHLNSYLIRALGINN-FLFN 463 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~ 463 (1428)
++|+ .+..... .........|. .....+...... ....++.++|..|.+.|.+.+.+.| .++.
T Consensus 78 --------Gl~~-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~ 147 (591)
T 3i3l_A 78 --------GLQE-KIDAQNY-VKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHE 147 (591)
T ss_dssp --------TCHH-HHHHHCC-EEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEET
T ss_pred --------CCcH-HHHhcCC-cccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEe
Confidence 1110 0000000 00000000011 112222221110 1234688999999999999998888 6888
Q ss_pred cceEEEEeCC-e----EEEc-CC--cEEEeeEEEecCCCCCCC---C--Cc----ceEEEEEEEEEecCC--cCCCCceE
Q psy10545 464 NKTVEIITPT-S----IRIN-NK--KIINANCIIDGRGLKNSQ---F--DG----IYQIFLGQQWNLSSP--HGLDIPII 524 (1428)
Q Consensus 464 ~~~v~~i~~~-~----v~l~-~g--~~~~a~lvI~AdG~~S~~---~--~~----~~q~~~g~~~~~~~~--~~~~~~~~ 524 (1428)
+++|+++..+ + |++. +| .+++|++||+|||.+|.. . .. +.+.++...+....+ .......+
T Consensus 148 g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~ 227 (591)
T 3i3l_A 148 ETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTY 227 (591)
T ss_dssp TCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEE
T ss_pred CCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceE
Confidence 9999998743 1 6665 66 579999999999999751 1 11 112222222222211 11112222
Q ss_pred EecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCC----CCHHHHHHHHHHHHHHcCCcccee-eeeeeeeecccCCc
Q psy10545 525 MDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPF----LKIDMLKKSIKDYAIKNRWKLKNI-EREEIGSIPIALKN 599 (1428)
Q Consensus 525 ~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~Pl~~~~ 599 (1428)
..+. ..+++|++|++++..+++.+....... .+.+.+.+.+.+........+... .......+|.....
T Consensus 228 ~~~~------~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~ 301 (591)
T 3i3l_A 228 SITF------EDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYD 301 (591)
T ss_dssp EEEE------TTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEEE
T ss_pred EEEc------CCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEecccccc
Confidence 2221 124689999998887776654433210 111222222221111000000000 11112233332222
Q ss_pred hhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 600 EKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 600 ~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
......+|+++||||||.++|++|||++.|+..|..+++++.
T Consensus 302 ~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~ 343 (591)
T 3i3l_A 302 TEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAID 343 (591)
T ss_dssp ESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHH
Confidence 333356899999999999999999998876666666665554
No 53
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.68 E-value=2.1e-15 Score=182.09 Aligned_cols=288 Identities=14% Similarity=0.048 Sum_probs=149.1
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHH-HHHHHHhcCCCceEEEeec
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSI-IAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~-~~~~~~~~~~~~rv~~l~~ 389 (1428)
+.+++|+|+|++|+++|+.|+++|++|+|+|+.+.+ +.+.+|+++.... ...+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~-----------~~~~~g~~~~~~~~~~~~~-------------- 80 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR-----------EARIFGGTLDLHKGSGQEA-------------- 80 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST-----------TCCCCSCCEECCTTTHHHH--------------
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc-----------cccccCCeeeeCCccHHHH--------------
Confidence 357899999999999999999999999999998765 2334555553110 00000
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCC-cccccccceeeechHHHHHHHHHhccCCeEEecceEE
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKF-NRKIFSGYYSICSKHLNSYLIRALGINNFLFNNKTVE 468 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~v~ 468 (1428)
+..+++|+ .+.. ...+... ..++. .....+... ..........++|..|.+.|.+++.+ ..++.+++|+
T Consensus 81 -----l~~~gl~~-~~~~-~~~~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~ 150 (398)
T 2xdo_A 81 -----MKKAGLLQ-TYYD-LALPMGV-NIADE-KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN-DTVIWDRKLV 150 (398)
T ss_dssp -----HHHTTCHH-HHHH-HCBCCCE-EEECS-SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT-TSEEESCCEE
T ss_pred -----HHhcChHH-HHHH-hhcccce-EEECC-CCCchhhccccccCCCCCceECHHHHHHHHHhhcCC-CEEEECCEEE
Confidence 00011111 0000 0001111 11110 111111100 00011234579999999999998865 4577899999
Q ss_pred EEeCCe----EEEcCCcEEEeeEEEecCCCCCCCC---CcceEEEEE---EEEEecCC---cCC-----CCceEEecccC
Q psy10545 469 IITPTS----IRINNKKIINANCIIDGRGLKNSQF---DGIYQIFLG---QQWNLSSP---HGL-----DIPIIMDATVN 530 (1428)
Q Consensus 469 ~i~~~~----v~l~~g~~~~a~lvI~AdG~~S~~~---~~~~q~~~g---~~~~~~~~---~~~-----~~~~~~~~~~~ 530 (1428)
+++.++ |++.+|.+++||+||+|||.+|... ........+ +...+... +.. ....++.++
T Consensus 151 ~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-- 228 (398)
T 2xdo_A 151 MLEPGKKKWTLTFENKPSETADLVILANGGMSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASH-- 228 (398)
T ss_dssp EEEECSSSEEEEETTSCCEEESEEEECSCTTCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEE--
T ss_pred EEEECCCEEEEEECCCcEEecCEEEECCCcchhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEec--
Confidence 987432 6777888999999999999998621 111111111 11112211 000 000111111
Q ss_pred CCCCcceEEEEeeCCCCceEEEeEEeccC--------CCCCHHHHHHHHHHHHHHcCCccc-------eeeeeeeeeecc
Q psy10545 531 QKNDEYHFIYTLPLTPNSLMIEDTRYTKK--------PFLKIDMLKKSIKDYAIKNRWKLK-------NIEREEIGSIPI 595 (1428)
Q Consensus 531 ~~~~g~~f~~~lPl~~~~~~v~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~Pl 595 (1428)
.+ .++...|.+++...+........ ...+.+.+.+.+.+.+......+. .+.......+|+
T Consensus 229 ---~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (398)
T 2xdo_A 229 ---QG-NLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPL 304 (398)
T ss_dssp ---TT-EEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCC
T ss_pred ---CC-CeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccC
Confidence 01 12334566666555433322111 112344555555443211110111 111122223443
Q ss_pred cCCchhhhhcc--CcccccccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 596 ALKNEKIIKFK--KTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 596 ~~~~~~~~~~~--rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
..... ..+ |++|||||||.++|++|||++.++..|..|++++..
T Consensus 305 ~~~~~---~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 350 (398)
T 2xdo_A 305 EKPWK---SKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLAD 350 (398)
T ss_dssp CSCCC---SCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHS
T ss_pred CCCcc---cCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHh
Confidence 22111 124 899999999999999999988777777777776654
No 54
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.66 E-value=3.3e-16 Score=196.50 Aligned_cols=296 Identities=11% Similarity=0.076 Sum_probs=160.2
Q ss_pred hHhhhccCCCChHHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHh
Q psy10545 298 IIRNFYANKLSFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQ 377 (1428)
Q Consensus 298 ~~~~Fl~~~~~~~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~ 377 (1428)
++.+|-.|... .+.|++|+|+||+|+++|+.|+++|++|+|||+.+.+ +...+|.++.+..+... .+
T Consensus 14 ~~~~~~~M~~~-~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~-----------~~~~~~~~l~~~~~~~l-~~ 80 (549)
T 2r0c_A 14 LVPRGSHMNAP-IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT-----------ITHPRVGTIGPRSMELF-RR 80 (549)
T ss_dssp --------CCC-EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC-----------CSSCCCCEECHHHHHHH-HH
T ss_pred ccchhhhcCCC-CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-----------CCCCceeeeCHHHHHHH-HH
Confidence 33444444322 3468999999999999999999999999999998765 34456777776543211 00
Q ss_pred cCCCceEEEeecCCCCC---CceeeeccCCcCcccccccccccccccCc-c--EEEcCCCc-----ccccccceeeechH
Q psy10545 378 YNPKLNVLLLELSSSVK---NHIWSFHQNDISSSQYMLIKPLITYSWPS-Y--QVKFPKFN-----RKIFSGYYSICSKH 446 (1428)
Q Consensus 378 ~~~~~rv~~l~~~s~~~---~~~w~~w~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~-----~~~~~~~~~i~r~~ 446 (1428)
..-.-++ ...+.... ...|. ....+ . .+.++... ...+..++.+++..
T Consensus 81 lGl~~~~--~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 139 (549)
T 2r0c_A 81 WGVAKQI--RTAGWPGDHPLDAAWV-------------------TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHW 139 (549)
T ss_dssp TTCHHHH--HTSSCCTTSBCCEEEE-------------------SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHH
T ss_pred cCChHHH--HhhcCCcccccceEEe-------------------ccCCCceeEeecccccccccccCCCCCcccccCHHH
Confidence 0000000 00000000 00000 00001 0 11111100 01223568899999
Q ss_pred HHHHHHHHhccCCeEEecceEEEEeCCe----EEEcC---C--cEEEeeEEEecCCCCCCC-------C--CcceEEEEE
Q psy10545 447 LNSYLIRALGINNFLFNNKTVEIITPTS----IRINN---K--KIINANCIIDGRGLKNSQ-------F--DGIYQIFLG 508 (1428)
Q Consensus 447 l~~~L~~~~~~~~~~~~~~~v~~i~~~~----v~l~~---g--~~~~a~lvI~AdG~~S~~-------~--~~~~q~~~g 508 (1428)
+++.|.+.+.+. ++.+++|++++.++ +++.+ | .+++|++||+|||.+|.. . ..+.+.++.
T Consensus 140 l~~~L~~~a~~~--v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~ 217 (549)
T 2r0c_A 140 LAPLLAEAVGER--LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRN 217 (549)
T ss_dssp HHHHHHHHHGGG--EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEE
T ss_pred HHHHHHHHHHHh--cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEE
Confidence 999999999876 88899999987432 45544 6 479999999999999751 1 124455665
Q ss_pred EEEEecCC----cCCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHHHHcCCccce
Q psy10545 509 QQWNLSSP----HGLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIKNRWKLKN 584 (1428)
Q Consensus 509 ~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 584 (1428)
..++.... +.......+.+.. ++ .+++++|++++..+.. .........+.+.+.+.+.+++ +..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~p----~~-~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~~- 287 (549)
T 2r0c_A 218 ILFRAPELRSLLGERAALFFFLMLS----SS-LRFPLRALDGRGLYRL-TVGVDDASKSTMDSFELVRRAV---AFDTE- 287 (549)
T ss_dssp EEEECTTHHHHHGGGCCSEEEEEEE----TT-EEEEEEESSSSSEEEE-EEECSTTCCSCCCHHHHHHHHB---CSCCC-
T ss_pred EEEECCchHHhcCCCCceEEEEECC----CC-cEEEEEEECCCcEEEE-EecCCCCCCCHHHHHHHHHHHh---CCCCc-
Confidence 55554310 0111111111111 11 2456788865433321 1111111123345555565554 32211
Q ss_pred eeeeeeeeecccCCchhhhhccCcccccccccccccCCCCChHH----HHHHHHHHHhh
Q psy10545 585 IEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPI----AIQLAENIAKY 639 (1428)
Q Consensus 585 ~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~----a~~la~~l~~~ 639 (1428)
+.......+++....+.....+||+|+|||||.++|++|||+|. |..|+..|+..
T Consensus 288 ~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~ 346 (549)
T 2r0c_A 288 IEVLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAAT 346 (549)
T ss_dssp CEEEEEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHH
Confidence 11122345666555555445689999999999999999999875 44555555443
No 55
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.66 E-value=1e-15 Score=183.66 Aligned_cols=277 Identities=9% Similarity=-0.041 Sum_probs=149.8
Q ss_pred HHHHhcCCchHHHHHHHHhhc--CCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 313 IRIFSGAGIGGIALAIRLQTA--GISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 313 ~~ii~g~~~~~~~~a~~La~~--G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+++|+|+|++|+++|+.|+++ |++|+|+|+.+.+ ...|.|+... ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~-------------~~~g~~~~~~-------------------~~ 49 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ-------------EVLGWGVVLP-------------------GR 49 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT-------------CCCCSEEEEE-------------------SC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC-------------CcceeEEEeC-------------------cH
Confidence 467999999999999999999 9999999998654 1123333211 11
Q ss_pred CCCCCceeeec-cCC-cCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceE
Q psy10545 391 SSVKNHIWSFH-QND-ISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTV 467 (1428)
Q Consensus 391 s~~~~~~w~~w-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v 467 (1428)
.........+| + . +. ....+...+.... .+..+.. ....+++.++|..|.+.|.+++.+.| .++.+++|
T Consensus 50 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~-~g~~~~~-----~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v 121 (381)
T 3c4a_A 50 PGQHPANPLSYLD-APER-LNPQFLEDFKLVH-HNEPSLM-----STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPL 121 (381)
T ss_dssp TTTCTTCGGGGSS-CGGG-GCCEEECCEEEEE-SSSEEEC-----CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCC
T ss_pred HHHhhcCcchhhh-hhHH-HhhccccceEEEe-CCeeEEe-----cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEe
Confidence 11100000111 1 0 00 0011111111111 1111110 11235678999999999999998877 68888888
Q ss_pred EEEeCCeEEEcCCcEEEeeEEEecCCCCCCCCCc-------ceEEEEEE-EEEecCCcCCCCceEEecccCCCCCcceEE
Q psy10545 468 EIITPTSIRINNKKIINANCIIDGRGLKNSQFDG-------IYQIFLGQ-QWNLSSPHGLDIPIIMDATVNQKNDEYHFI 539 (1428)
Q Consensus 468 ~~i~~~~v~l~~g~~~~a~lvI~AdG~~S~~~~~-------~~q~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~f~ 539 (1428)
++++.. .+++|++||+|||.+|. ... ......+. .+....+........+.+ ...|+.++
T Consensus 122 ~~i~~~-------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~ 189 (381)
T 3c4a_A 122 LEHGEL-------PLADYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLFDQMNLVFRT----HGKDIFIA 189 (381)
T ss_dssp CSGGGC-------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCCSSEEEEEEE----ETTEEEEE
T ss_pred ccchhc-------ccccCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCCCcceeeEee----CCCcEEEE
Confidence 877542 13579999999999985 211 00110111 111111111111222221 12344344
Q ss_pred EEeeCCCCceEEEeEEec------cCCCCCHHHHHHHHHHHHHHcCCccceeeeeeeeeecccC-CchhhhhccCccccc
Q psy10545 540 YTLPLTPNSLMIEDTRYT------KKPFLKIDMLKKSIKDYAIKNRWKLKNIEREEIGSIPIAL-KNEKIIKFKKTICVG 612 (1428)
Q Consensus 540 ~~lPl~~~~~~v~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~Pl~~-~~~~~~~~~rv~lvG 612 (1428)
+++|++++..++...... .....+.+.+.+.+.+++....... +++......+|+.. ........+|++|||
T Consensus 190 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~grv~LvG 268 (381)
T 3c4a_A 190 HAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGH-GLVSQPGLGWRNFMTLSHDRCHDGKLVLLG 268 (381)
T ss_dssp EEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBCCTTTCSEEEEECCCSCSEETTEEECG
T ss_pred EEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCc-hhhcCCCcceeeeccccCCCcccCCEEEEE
Confidence 578998776544333211 1122345566666666655422111 22221111233321 112223458999999
Q ss_pred ccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 613 LRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 613 dAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
||||.+||++|||++.|+..|..|++++..
T Consensus 269 DAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 269 DALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp GGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 999999999999998877777777777654
No 56
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.65 E-value=6.2e-16 Score=186.69 Aligned_cols=143 Identities=13% Similarity=0.110 Sum_probs=89.0
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
.+++|+|+|++|+++|+.|+++|++|+|+|+.+.+ ...+|+|+............
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~------------~~~~~~g~~l~~~~~~~l~~------------- 60 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP------------LSGFGTGIVVQPELVHYLLE------------- 60 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS------------CCCCSCEEECCHHHHHHHHH-------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC------------CCccccccccChhHHHHHHH-------------
Confidence 47889999999999999999999999999988643 12245555332222222111
Q ss_pred CCCCceeeeccCCcCccccccccccccccc-CccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSW-PSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEI 469 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~ 469 (1428)
+++|.. ....+...+..... .+..+. ....+...+.+..+.+.|.+.+. + .++.+++|++
T Consensus 61 ------~g~~~~----~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~l~~~L~~~~~--~~~i~~~~~v~~ 122 (397)
T 2vou_A 61 ------QGVELD----SISVPSSSMEYVDALTGERVG------SVPADWRFTSYDSIYGGLYELFG--PERYHTSKCLVG 122 (397)
T ss_dssp ------TTCCGG----GTCBCCCEEEEEETTTCCEEE------EEECCCCEEEHHHHHHHHHHHHC--STTEETTCCEEE
T ss_pred ------cCCccc----cccccccceEEEecCCCCccc------cccCcccccCHHHHHHHHHHhCC--CcEEEcCCEEEE
Confidence 111110 00111111111111 111110 01113345788899999998873 4 6888999999
Q ss_pred EeCC--e--EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 470 ITPT--S--IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 470 i~~~--~--v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
++.+ . |++.+|.+++|++||+|||.+|.
T Consensus 123 i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 123 LSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred EEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 9643 2 67788889999999999999976
No 57
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.64 E-value=6.9e-16 Score=187.13 Aligned_cols=290 Identities=14% Similarity=0.116 Sum_probs=148.3
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCe-EEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGIS-TIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~-V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
.+++|+|+|++|+++|+.|+++|++ |+|+|+.+.+ + .+|.|+.......+....
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~-----------~--~~g~g~~l~~~~~~~l~~------------ 59 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI-----------R--PLGVGINIQPAAVEALAE------------ 59 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC-----------C--CCSCEEEECHHHHHHHHH------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc-----------c--cceeEEEEChHHHHHHHH------------
Confidence 4789999999999999999999999 9999998754 1 123333221111111110
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCcc-EEEcCCC-cccccccceeeechHHHHHHHHHhccC-C--eEEecc
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSY-QVKFPKF-NRKIFSGYYSICSKHLNSYLIRALGIN-N--FLFNNK 465 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~-~--~~~~~~ 465 (1428)
+++|+ .+.. ...++..+......+. ....+.. ......+++.++|..|.+.|.+++.+. | .++.++
T Consensus 60 -------lg~~~-~l~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~ 130 (410)
T 3c96_A 60 -------LGLGP-ALAA-TAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGL 130 (410)
T ss_dssp -------TTCHH-HHHH-HSEEECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESE
T ss_pred -------CCChH-HHHh-hCCCcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECC
Confidence 11111 0000 0011111111111111 1111110 011223568899999999999999762 4 588899
Q ss_pred eEEEEeC-Ce--EEEcC---C--cEEEeeEEEecCCCCCCC---CC--cceEEEEEEE---EEec-CCcCCCCceEEecc
Q psy10545 466 TVEIITP-TS--IRINN---K--KIINANCIIDGRGLKNSQ---FD--GIYQIFLGQQ---WNLS-SPHGLDIPIIMDAT 528 (1428)
Q Consensus 466 ~v~~i~~-~~--v~l~~---g--~~~~a~lvI~AdG~~S~~---~~--~~~q~~~g~~---~~~~-~~~~~~~~~~~~~~ 528 (1428)
+|++++. +. |++.+ | .+++|++||+|||.+|.. +. .....+.+.. .... .+...... .+.++
T Consensus 131 ~v~~i~~~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 209 (410)
T 3c96_A 131 GVERIEERDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKT-MIVAN 209 (410)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSE-EEEEE
T ss_pred EEEEEecCCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCe-EEEec
Confidence 9998875 22 55554 6 579999999999999761 11 1111121211 1111 22211111 22222
Q ss_pred cCCCCCcceEEEEeeCCC-----CceEEEeEEe-cc--------CC----CCCHHHHHHHHHHHHHHcCC-ccceeee--
Q psy10545 529 VNQKNDEYHFIYTLPLTP-----NSLMIEDTRY-TK--------KP----FLKIDMLKKSIKDYAIKNRW-KLKNIER-- 587 (1428)
Q Consensus 529 ~~~~~~g~~f~~~lPl~~-----~~~~v~~~~~-~~--------~~----~~~~~~~~~~l~~~~~~~~~-~~~~~~~-- 587 (1428)
. . ...+++++|+++ +...+.+... .. .. ....+++.+.+..+. .++ ...+++.
T Consensus 210 ~--~--~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~ 283 (410)
T 3c96_A 210 D--E--HWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWD--LGWFDIRDLLTRN 283 (410)
T ss_dssp C--T--TCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCC--BTTBCHHHHHHTC
T ss_pred C--C--CCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCC--CchhHHHHHHhcC
Confidence 1 0 112466788753 3222221111 10 01 112233333221110 011 0111111
Q ss_pred eeeeeecccCCc-hhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 588 EEIGSIPIALKN-EKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 588 ~~~~~~Pl~~~~-~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
.....+|+.... ......+|++|||||||.++|++|||++.++..|..|++.+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 284 QLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp SEEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred cccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 112345554322 2223458999999999999999999998777777777777654
No 58
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.63 E-value=2e-15 Score=188.77 Aligned_cols=191 Identities=14% Similarity=0.083 Sum_probs=118.4
Q ss_pred cceeeechHHHHHHHHHhcc-CC-eEEecceEEEEeCC------eEEEcCCcEEEeeEEEecCCCCCCCCC----c-c--
Q psy10545 438 GYYSICSKHLNSYLIRALGI-NN-FLFNNKTVEIITPT------SIRINNKKIINANCIIDGRGLKNSQFD----G-I-- 502 (1428)
Q Consensus 438 ~~~~i~r~~l~~~L~~~~~~-~~-~~~~~~~v~~i~~~------~v~l~~g~~~~a~lvI~AdG~~S~~~~----~-~-- 502 (1428)
..+.++|..|.+.|.+.+.+ .| .++.+ +|+++..+ .|++.+|.+++|++||+|||.+|...+ . .
T Consensus 168 ~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~~ 246 (526)
T 2pyx_A 168 YGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLS 246 (526)
T ss_dssp CEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEEE
T ss_pred eeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCccc
Confidence 45789999999999999988 78 56667 69888632 256677778999999999999976311 1 0
Q ss_pred ------eEEEEEEEEEecCCcCC-CCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHH
Q psy10545 503 ------YQIFLGQQWNLSSPHGL-DIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYA 575 (1428)
Q Consensus 503 ------~q~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~ 575 (1428)
...++...+....+... .......+ ...+++|++|++++ ..++.. ++.. ..+.+...+.+.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~pl~~~-~~~~~v-~~~~-~~~~~~~~~~l~~~l 317 (526)
T 2pyx_A 247 QKSVLFNDRALAIQVPYSDANSPIASCTHSTA------QPNGWIWDIGLPTR-KGVGYV-YSSS-HTNDIDAQKTLFNYL 317 (526)
T ss_dssp CHHHHCCCEEEEEEEECSSTTCCCCSSEEEEE------ETTEEEEEEECSSE-EEEEEE-ECTT-TCCHHHHHHHHHHHH
T ss_pred ccccccCccEEEEEeeccCCCCCCCCceeEEe------cCCCeEEEeeCCCc-eEEEEE-ecCC-CCChHHHHHHHHHHH
Confidence 11334434333221111 11111111 11247889999764 333222 2222 224455556666655
Q ss_pred HHcCCccceeeeeeeeeecccCCchhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 576 IKNRWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
...+.. +...+...+|+..........+|+++||||||.++|++|||++.++..|..|++++.
T Consensus 318 ~~~~~~---l~~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~ 380 (526)
T 2pyx_A 318 GVDGAA---ADKLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLP 380 (526)
T ss_dssp TCCHHH---HHHCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCC
T ss_pred HhcCcc---cccCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhh
Confidence 221111 111222355665544444456999999999999999999999999999999998876
No 59
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.62 E-value=3.4e-15 Score=190.44 Aligned_cols=292 Identities=10% Similarity=0.067 Sum_probs=157.4
Q ss_pred HHHHHHhcCCchHHHHHHHHhh-cCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeec
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQT-AGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~-~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~ 389 (1428)
+.|++|+|+||+|+++|+.|++ .|++|+|||+++.+ ....++.|+.+..+...- ...-.-++ ...
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~-----------~~~g~a~~l~~~t~e~l~-~lGl~~~~--~~~ 97 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP-----------MELGQADGIACRTMEMFE-AFEFADSI--LKE 97 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC-----------CSSCSCCEECHHHHHHHH-HTTCHHHH--HHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC-----------CCCCceeeeCHHHHHHHH-HcCcHHHH--HHh
Confidence 4689999999999999999999 99999999998765 334466677665432110 00000000 000
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCccc-ccccceeeechHHHHHHHHHhccCC---eEEecc
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRK-IFSGYYSICSKHLNSYLIRALGINN---FLFNNK 465 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~~---~~~~~~ 465 (1428)
+. ......+|..+.. ....+ .....++..... .....+.+++..+.+.|.+.+.+.| .++.++
T Consensus 98 ~~--~~~~~~~~~~~~~--~~g~~---------~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~ 164 (639)
T 2dkh_A 98 AC--WINDVTFWKPDPG--QPGRI---------ARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYAR 164 (639)
T ss_dssp SE--EECEEEEEEECTT--STTCE---------EEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSE
T ss_pred cc--cccceEEECCCCC--CCcce---------EeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCC
Confidence 00 0001112210000 00000 000011111111 1234578999999999999998875 578899
Q ss_pred eEEEEeCC------e--EEEc------CC--cEEEeeEEEecCCCCCCC---CC------cceEEEEEEEEEe--cCCcC
Q psy10545 466 TVEIITPT------S--IRIN------NK--KIINANCIIDGRGLKNSQ---FD------GIYQIFLGQQWNL--SSPHG 518 (1428)
Q Consensus 466 ~v~~i~~~------~--v~l~------~g--~~~~a~lvI~AdG~~S~~---~~------~~~q~~~g~~~~~--~~~~~ 518 (1428)
+|++++.+ . |++. +| .+++|++||+|||.+|.. +. .+.+......+.. ..|+.
T Consensus 165 ~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~ 244 (639)
T 2dkh_A 165 RVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDV 244 (639)
T ss_dssp EEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTT
T ss_pred EEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCcc
Confidence 99998632 2 4443 45 479999999999999761 11 1112222222221 22221
Q ss_pred CCCceEEecccCCCCCcceEEEEeeCCCC-ceEEEeEEec--c-----CCCCCHHHHHHHHHHHHHHcCCccceeeeee-
Q psy10545 519 LDIPIIMDATVNQKNDEYHFIYTLPLTPN-SLMIEDTRYT--K-----KPFLKIDMLKKSIKDYAIKNRWKLKNIEREE- 589 (1428)
Q Consensus 519 ~~~~~~~~~~~~~~~~g~~f~~~lPl~~~-~~~v~~~~~~--~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 589 (1428)
. ....+.. . .++++++|++++ ...+...... . ....+.+++.+.+.+.+ +....++....
T Consensus 245 ~-~~~~~~~----~---~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~ 313 (639)
T 2dkh_A 245 R-YKVAIQS----E---QGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVL---HPYKLEVKNVPW 313 (639)
T ss_dssp T-SEEEEEE----T---TEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHH---TTSCEEEEEEEE
T ss_pred c-eeEEEEc----C---CceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHh---CcccCcceeeeE
Confidence 1 1111111 1 245778899877 4444332211 0 12235566766666555 21111222111
Q ss_pred eeeecccCCchhhhh------------ccCcccccccccccccCCCCChHHHHH----HHHHHHhhc
Q psy10545 590 IGSIPIALKNEKIIK------------FKKTICVGLRANLLHATTGYSLPIAIQ----LAENIAKYS 640 (1428)
Q Consensus 590 ~~~~Pl~~~~~~~~~------------~~rv~lvGdAA~~vhP~~G~G~~~a~~----la~~l~~~~ 640 (1428)
...+++....+..+. .+||+|+|||||.++|++|||++.++. |+..|+..+
T Consensus 314 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl 380 (639)
T 2dkh_A 314 WSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVL 380 (639)
T ss_dssp EEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHH
Confidence 245665544333333 689999999999999999999875444 555555443
No 60
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.59 E-value=4.4e-14 Score=177.25 Aligned_cols=188 Identities=9% Similarity=0.056 Sum_probs=119.0
Q ss_pred cceeeechHHHHHHHHHhccCC-eEEecceEEEEeC--C----eEEEcCCcEEEeeEEEecCCCCCCCCC----cc----
Q psy10545 438 GYYSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--T----SIRINNKKIINANCIIDGRGLKNSQFD----GI---- 502 (1428)
Q Consensus 438 ~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~----~v~l~~g~~~~a~lvI~AdG~~S~~~~----~~---- 502 (1428)
..+.++|..|.+.|.+.+.+.| .++.+ +|+++.. + .|++.+|.+++|++||+|||.+|.... ..
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~ 236 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDM 236 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccc
Confidence 3578999999999999998888 56667 8988863 2 266778878999999999999876311 00
Q ss_pred -----eEEEEEEEEEecCCcC-CCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHHH
Q psy10545 503 -----YQIFLGQQWNLSSPHG-LDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAI 576 (1428)
Q Consensus 503 -----~q~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~ 576 (1428)
.+.++...+....+.. ......... ...+++|++|+++. ..++.. ++. ...+.+...+.+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~p~~~~-~~~g~v-~~~-~~~~~~~~~~~l~~~~~ 307 (538)
T 2aqj_A 237 SDYLLCDSAVASAVPNDDARDGVEPYTSSIA------MNSGWTWKIPMLGR-FGSGYV-FSS-HFTSRDQATADFLKLWG 307 (538)
T ss_dssp TTTCCCCEEEEEEEECCHHHHCCCSSEEEEE------CSSEEEEEEEETTE-EEEEEE-ECT-TTSCHHHHHHHHHHHHT
T ss_pred ccccccceEEEEecccCCcccCCCCceeeee------cCCceEEEecCCCc-eEEEEE-EcC-CCCChHHHHHHHHHHhc
Confidence 1122332322211100 000111111 11347899999764 444432 222 22345566666666652
Q ss_pred HcCCccceeeeeeeeeecccCCchhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 577 KNRWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 577 ~~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
. ..+ .+...+|+..........+|+++||||||.++|++|||++.++..|..|++++..
T Consensus 308 ~--~~~-----~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~ 366 (538)
T 2aqj_A 308 L--SDN-----QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD 366 (538)
T ss_dssp C--CTT-----CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB
T ss_pred C--CCC-----CCceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc
Confidence 1 111 1223456654444434569999999999999999999999999999999988763
No 61
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.58 E-value=4.2e-14 Score=177.53 Aligned_cols=189 Identities=8% Similarity=0.096 Sum_probs=118.3
Q ss_pred cceeeechHHHHHHHHHhccC-C-eEEecceEEEEeC--Ce----EEEcCCcEEEeeEEEecCCCCCCCCC----c----
Q psy10545 438 GYYSICSKHLNSYLIRALGIN-N-FLFNNKTVEIITP--TS----IRINNKKIINANCIIDGRGLKNSQFD----G---- 501 (1428)
Q Consensus 438 ~~~~i~r~~l~~~L~~~~~~~-~-~~~~~~~v~~i~~--~~----v~l~~g~~~~a~lvI~AdG~~S~~~~----~---- 501 (1428)
..+.+++..|.+.|.+.+.+. | .++.+ +|+++.. ++ |++.+|.+++|++||+|||.+|.... .
T Consensus 187 ~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~ 265 (550)
T 2e4g_A 187 YAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLD 265 (550)
T ss_dssp CEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred cceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCccc
Confidence 357899999999999999887 7 67777 8998863 22 66778888999999999999875211 0
Q ss_pred -----ceEEEEEEEEEecCCcC-CCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHH
Q psy10545 502 -----IYQIFLGQQWNLSSPHG-LDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYA 575 (1428)
Q Consensus 502 -----~~q~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~ 575 (1428)
..+..+...+....+.. ......... ...++.|++|+++ ...++....+ ...+.+...+.+.+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~ipl~~-~~~~g~v~~~--~~~~~~~~~~~l~~~~ 336 (550)
T 2e4g_A 266 MSDHLLNDSAVATQVPHDDDANGVEPFTSAIA------MKSGWTWKIPMLG-RFGTGYVYSS--RFATEDEAVREFCEMW 336 (550)
T ss_dssp CTTTCCCCEEEEEEEECCHHHHCCCSSEEEEE------CSSEEEEEEECSS-EEEEEEEECT--TTSCHHHHHHHHHHHT
T ss_pred ccccccccceEEEeecccCCcccCCCceeeee------cCCceEEEccCCC-ccceEEEEec--CCCChHHHHHHHHHhh
Confidence 01123333322221100 000101000 1235688999976 3444433322 2234555556665554
Q ss_pred HHcCCccceeeeeeeeeecccCCchhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 576 IKNRWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
+.. ..+ .+...+|+..........+|+++||||||.++|++|||++.++..|..|++++..
T Consensus 337 ---~~~-p~l--~~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~ 397 (550)
T 2e4g_A 337 ---HLD-PET--QPLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD 397 (550)
T ss_dssp ---TCC-TTT--SCCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC
T ss_pred ---CcC-ccc--CCCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc
Confidence 222 011 1223445544443334568999999999999999999999999999999988764
No 62
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.58 E-value=8.2e-14 Score=173.99 Aligned_cols=189 Identities=11% Similarity=0.107 Sum_probs=121.5
Q ss_pred cceeeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce----EEEcCCcEEEeeEEEecCCCCCCCCC----c-----
Q psy10545 438 GYYSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS----IRINNKKIINANCIIDGRGLKNSQFD----G----- 501 (1428)
Q Consensus 438 ~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~----v~l~~g~~~~a~lvI~AdG~~S~~~~----~----- 501 (1428)
.++.++|..|.+.|.+.+.+.| .++.+ +|+++.. ++ |++.+|.+++|++||+|||.+|.... .
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~ 244 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSF 244 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCccc
Confidence 4678999999999999998888 67777 8988863 22 66778888999999999999976311 0
Q ss_pred ----ceEEEEEEEEEecCCcCCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccCCCCCHHHHHHHHHHHHHH
Q psy10545 502 ----IYQIFLGQQWNLSSPHGLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIK 577 (1428)
Q Consensus 502 ----~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~ 577 (1428)
....++...+....+............ ..+++|++|+++ ...++... +. ...+.+...+.+.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~P~~~-~~~~g~~~-~~-~~~~~~~~~~~l~~~~-- 313 (511)
T 2weu_A 245 SDVLPNNRAVALRVPRENDEDMRPYTTATAM------SAGWMWTIPLFK-RDGNGYVY-SD-EFISPEEAERELRSTV-- 313 (511)
T ss_dssp TTTCCCCEEEEEEEECSSGGGCCSSEEEEEE------TTEEEEEEECSS-EEEEEEEE-CT-TTSCHHHHHHHHHHHH--
T ss_pred cccCcccceEEEEeccCCCCCCCcceeceec------CCCcEEEEECCC-ceEEEEEE-CC-CCCCHHHHHHHHHHHh--
Confidence 012233333333222101111111111 124789999976 45554432 22 2235556666666655
Q ss_pred cCCccceeeeeeeeeecccCCchhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 578 NRWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 578 ~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
+... .+ .+...+|+..........+|+++||||||.++|++|||++.++..|..|++++..
T Consensus 314 -~~~~-~~--~~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~ 374 (511)
T 2weu_A 314 -APGR-DD--LEANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG 374 (511)
T ss_dssp -CTTC-TT--SCCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC
T ss_pred -Cccc-cc--ccceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc
Confidence 3321 11 2234455544444333558999999999999999999999999999999998874
No 63
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.58 E-value=2.8e-14 Score=179.77 Aligned_cols=293 Identities=12% Similarity=0.055 Sum_probs=155.7
Q ss_pred CCCChHHHHHHHhcCCchHHHHHHHHhhc------CCeEEEEcCCCCCcccccccccCCCCc-ccCcchhHHHHHHHHHh
Q psy10545 305 NKLSFFDKIRIFSGAGIGGIALAIRLQTA------GISTIILEQRDKLSWINLKFQFGVGYP-NTNQGLWNSIIAWYLKQ 377 (1428)
Q Consensus 305 ~~~~~~~~~~ii~g~~~~~~~~a~~La~~------G~~V~lie~~~~~~~~~~~~~~~~~~~-~~g~Gl~~~~~~~~~~~ 377 (1428)
++...+++|+||+|+|++|+++|+.|++. |++|+|||+.+.+ +.. .+|+.+.+..+. .
T Consensus 29 ~~~~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~-----------g~~~~~g~~l~~~~l~-~--- 93 (584)
T 2gmh_A 29 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI-----------GAHTLSGACLDPRAFE-E--- 93 (584)
T ss_dssp CCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST-----------TTTCCCCCEECTHHHH-H---
T ss_pred ccccccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC-----------CCccccccccCHHHHH-H---
Confidence 33334567999999999999999999999 9999999998765 222 345555444322 1
Q ss_pred cCCCceEEEeecCCCCCCceeeeccCCcCcccccccccc-----cccccCccEEEcCCCc--ccccccceeeechHHHHH
Q psy10545 378 YNPKLNVLLLELSSSVKNHIWSFHQNDISSSQYMLIKPL-----ITYSWPSYQVKFPKFN--RKIFSGYYSICSKHLNSY 450 (1428)
Q Consensus 378 ~~~~~rv~~l~~~s~~~~~~w~~w~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~i~r~~l~~~ 450 (1428)
..++ |.. ...|+... ..+-.....+.++... .......++++|..|.+.
T Consensus 94 ll~~-------------------~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~ 149 (584)
T 2gmh_A 94 LFPD-------------------WKE-----KGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSW 149 (584)
T ss_dssp HCTT-------------------HHH-----HTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHH
T ss_pred HHHH-------------------HHh-----cCCceeeeechhheeeeccCCCccccccCccccccCCCEEEeHHHHHHH
Confidence 1111 000 00000000 0000000122222100 011224688999999999
Q ss_pred HHHHhccCC-eEEecceEEEEeCC--e----EEEc------CC---------cEEEeeEEEecCCCCCC---CC----C-
Q psy10545 451 LIRALGINN-FLFNNKTVEIITPT--S----IRIN------NK---------KIINANCIIDGRGLKNS---QF----D- 500 (1428)
Q Consensus 451 L~~~~~~~~-~~~~~~~v~~i~~~--~----v~l~------~g---------~~~~a~lvI~AdG~~S~---~~----~- 500 (1428)
|.+++++.| .++.+++|+++..+ + |++. +| .+++|++||+|||.+|. .+ .
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl 229 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDL 229 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTT
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCC
Confidence 999998888 68889999988632 2 4444 33 68999999999999975 11 1
Q ss_pred ----cceEEEEEEEE--EecCCcCCCCceEEecccCCCCCcceEEEEeeCC--CCceEEEeEEeccCC--CCCH-HHHHH
Q psy10545 501 ----GIYQIFLGQQW--NLSSPHGLDIPIIMDATVNQKNDEYHFIYTLPLT--PNSLMIEDTRYTKKP--FLKI-DMLKK 569 (1428)
Q Consensus 501 ----~~~q~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~f~~~lPl~--~~~~~v~~~~~~~~~--~~~~-~~~~~ 569 (1428)
......++... ++.........+...++.+..+......|++|+. ++.++++........ ..+. +.+
T Consensus 230 ~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l-- 307 (584)
T 2gmh_A 230 RANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREF-- 307 (584)
T ss_dssp TTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHH--
T ss_pred CCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHH--
Confidence 12223334322 2221111112222222211111112223445666 678777666543321 1122 233
Q ss_pred HHHHHHHH--cC--Cccceeeeeee-eeecccCCchhhhhccCcccccccccccccCCCCChHHHHHHHHHHHhhc
Q psy10545 570 SIKDYAIK--NR--WKLKNIEREEI-GSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYS 640 (1428)
Q Consensus 570 ~l~~~~~~--~~--~~~~~~~~~~~-~~~Pl~~~~~~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~ 640 (1428)
+++... +. +..++++.... ...|...........+|++|||||||.++|++|||++.|+..|..+++++
T Consensus 308 --~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L 381 (584)
T 2gmh_A 308 --QRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESI 381 (584)
T ss_dssp --HHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHH
T ss_pred --HHHHhChHHHHHhCCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHH
Confidence 332210 00 01123332222 23344333223335589999999999999999999775555444444444
No 64
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.54 E-value=1.1e-13 Score=162.41 Aligned_cols=267 Identities=13% Similarity=0.081 Sum_probs=142.6
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccC-CCCCCcceEEE----------eCCeEEcccccccCC-chHHHHH
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR-DKPGGRAYVYK----------QDGFIFDAGPTVITD-PNSIKLL 776 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~-~~~GGr~~s~~----------~~G~~~d~G~~~i~~-~~~~~~l 776 (1428)
+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.+++ ..++.+|.|++++.. ...+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 34689999999999999999999999999999999 99999999988 357899999998864 3467889
Q ss_pred HHHhcccccccceEE--e----------------cCC-------------------ceEEEeCCCcEEEecCCHHHHHHH
Q psy10545 777 FDLSKNRMENYVNLL--P----------------IKP-------------------FYRLYWGKEKFLNYEDNIKDLEKQ 819 (1428)
Q Consensus 777 ~~~lG~~l~~~l~~~--~----------------~~~-------------------~~~~~~~~g~~~~~~~~~~~~~~~ 819 (1428)
++++|+......... + .+. .....+.+|..+.... .......
T Consensus 122 ~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~~-~~~~~~~ 200 (376)
T 2e1m_A 122 IDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRAQ-YATDPSS 200 (376)
T ss_dssp HHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHHH-HHHCTHH
T ss_pred HHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecccc-cccCHHH
Confidence 999996532211000 0 000 1112223343332210 0000111
Q ss_pred HHh---hCccc-HHHHHHH-HHHHHHHHHHhhhh-h--cccCcccHHHHHHhhHHH-HhhcccCCHHHHHH-hhcCCHHH
Q psy10545 820 IAK---FNLND-IKGYRLF-LNYSKKVFKEGYLS-F--ASKSFLTINDMLFILPKL-IKIKAWKSVYSIVS-QFIKNDYL 889 (1428)
Q Consensus 820 l~~---~~p~~-~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~-~~~~~~~l 889 (1428)
+.. ..+.+ ......+ ...++.+... +.. . .......+.......... ..+ +..|+.+|+. +...++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-D~~S~~~~L~~~~g~s~~~ 278 (376)
T 2e1m_A 201 INEGFHLTGCETRLTVSDMVNQALEPVRDY-YSVKQDDGTRVNKPFKEWLAGWADVVRDF-DGYSMGRFLREYAEFSDEA 278 (376)
T ss_dssp HHHHTTCCGGGGGSCHHHHHHHHHHHHHHH-HEEEETTTEEEECCHHHHHHHHHHHHHHH-TTCBHHHHHHHTSCCCHHH
T ss_pred hccccCCchhhcccCHHHHHHHHHHHHHHh-hhhccccccccccccchhhccchHHHHHH-hCCCHHHHHhhccCCCHHH
Confidence 111 11110 0011111 1122222211 110 0 000000011111111111 123 4889999998 55556666
Q ss_pred HHHHHhhcccccCCCCchhHHHHHHHH--hccccceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEE
Q psy10545 890 KQAFSFNSLFIGGNPFSTSSIYTLIHA--LEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKV 967 (1428)
Q Consensus 890 ~~~l~~~~~~~g~~p~~~s~~~~~~~~--~~~~~g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V 967 (1428)
...+.....+ + .....+.+..+... .......+.++||+++|+++|++.+. .+|++|++|++|..+++++..+
T Consensus 279 ~~~~~~~~~~-~-~~~~~s~l~~l~~~~~~~~~~~~~~i~GG~~~l~~~l~~~l~---~~i~l~~~V~~I~~~~~gv~v~ 353 (376)
T 2e1m_A 279 VEAIGTIENM-T-SRLHLAFFHSFLGRSDIDPRATYWEIEGGSRMLPETLAKDLR---DQIVMGQRMVRLEYYDPGRDGH 353 (376)
T ss_dssp HHHHHHHTTC-T-TTTTSBHHHHHHHCSCSCTTCCEEEETTCTTHHHHHHHHHGG---GTEECSEEEEEEEECCCC----
T ss_pred HHHHHhhcCc-c-ccchhhHHHHHHHhhhhccCCceEEECCcHHHHHHHHHHhcC---CcEEecCeEEEEEECCCceEEE
Confidence 6655432211 1 11244444433322 12233567899999999999998874 6799999999999887764333
Q ss_pred EecCCcEEEcCEEEEcC
Q psy10545 968 HLKNGQIFDADIIVSNA 984 (1428)
Q Consensus 968 ~~~~G~~i~ad~VV~A~ 984 (1428)
..+.......+|.+.+
T Consensus 354 -~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 354 -HGELTGPGGPAVAIQT 369 (376)
T ss_dssp ----------CCEEEEE
T ss_pred -eCCCcCCCCCeeEEEe
Confidence 3233334555666655
No 65
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.49 E-value=2e-12 Score=155.91 Aligned_cols=230 Identities=16% Similarity=0.149 Sum_probs=151.7
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCC---CceeEEeccccCccccccccccccCccCccEEEcCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVK---NHIWSFHQTVLSSSQYMLIKPLITYSWPSYQVKFPKF 83 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~---~~tw~~w~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 83 (1428)
.++||+|||||+||+++|+.|++. +.+|+|||+++..+ ....+.+..-+.....+.....+.+.|....+..+..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~--G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCC
Confidence 359999999999999999999996 47999999997552 1122222221111111111245567788888887764
Q ss_pred cc--ccCc------cccceehhHHHHHHHHH-------------------cCCE---EEE---------ecC--------
Q psy10545 84 NR--KIFS------GYYSICSKHLNSYLIRA-------------------LGQQ---WNL---------SSP-------- 116 (1428)
Q Consensus 84 ~~--~~~~------~Y~~~~~~~~~~~~~~~-------------------~~~~---~~~---------~~~-------- 116 (1428)
.. .++. .+.+++...|.+.+.+. .+.. +.+ ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 81 KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 43 2222 36788999998888662 0111 111 000
Q ss_pred C-------CCCc----e--------Eee----------ecccCCCCCCceEEEEccCCCCcEEEEEeeecCCCCCCHHHH
Q psy10545 117 H-------GLDI----P--------IIM----------DATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDML 167 (1428)
Q Consensus 117 ~-------g~~~----~--------~~M----------D~r~~~~~~~~~F~Y~lP~~~~~~liE~T~~~~~~~~~~~~~ 167 (1428)
+ |.+. + ..| ++...+. ..-.|.|++|++++++.|..+....... +....
T Consensus 161 ~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~P~~~~~~~vg~~~~~~~~~-~~~~~ 238 (397)
T 3cgv_A 161 ESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSI-APAGYIWVFPKGEGMANVGIGSSINWIH-NRFEL 238 (397)
T ss_dssp TCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTT-STTEEEEEEEEETTEEEEEEEEETTTCS-CHHHH
T ss_pred chHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCc-CCCceEEEEECCCCeEEEEEEecccccc-CCCCH
Confidence 0 1111 0 011 1111100 1235899999999999999999987764 55677
Q ss_pred HHHHHHHHHHc-CCcceeEEEEEEEeecCCCCcchhhcccCceecccccccccCCCCCcHHHHHHHHHHHHHHhh
Q psy10545 168 KKSIKDYAIKN-RWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 241 (1428)
Q Consensus 168 ~~~l~~~l~~~-g~~~~~i~~~E~g~iPm~~~~~~~~~~~~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~~~ 241 (1428)
.+.++++++.. ++...++.+.+.+.+||....+. -..++++.+|-|+|+++|.+|+.+..+.+.+..+|+.|.
T Consensus 239 ~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 239 KNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMP-ITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp HHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSC-CEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCccc-eeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 77888887764 45667899999999999655221 124789999999999999999999999999988887774
No 66
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.46 E-value=1.6e-13 Score=166.90 Aligned_cols=297 Identities=12% Similarity=0.011 Sum_probs=139.3
Q ss_pred hhHhhhccCCC-ChHHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchh-HHHHHHH
Q psy10545 297 KIIRNFYANKL-SFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLW-NSIIAWY 374 (1428)
Q Consensus 297 ~~~~~Fl~~~~-~~~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~-~~~~~~~ 374 (1428)
....+|+++.+ +.+..+++|+|+||+|+++|+.|+++|++|+|||+++.+... . + ...+.++. ...+. .
T Consensus 7 ~~~~~~~~~~~~~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~-----~--g-~~~~~~~~~~~~~~-~ 77 (430)
T 3ihm_A 7 HHHHSSGLVPRGSHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYS-----G--L-RLLNTVAHNAVTVQ-R 77 (430)
T ss_dssp ----------------CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGST-----T--S-CCCCCCCBCHHHHH-H
T ss_pred cccccceeecccCcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhc-----c--c-ccccchhccchhhh-h
Confidence 45667776653 334567899999999999999999999999999988643111 1 1 11222221 11111 0
Q ss_pred HHhcCCCceEEEeecCCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHH
Q psy10545 375 LKQYNPKLNVLLLELSSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRA 454 (1428)
Q Consensus 375 ~~~~~~~~rv~~l~~~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~ 454 (1428)
..... . +.|.. ...++..+.++......+.+.. ....++++|++..+...|.++
T Consensus 78 ~~~lg---------------~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~l~~~L~~~ 131 (430)
T 3ihm_A 78 EVALD---------------V---NEWPS-----EEFGYFGHYYYVGGPQPMRFYG---DLKAPSRAVDYRLYQPMLMRA 131 (430)
T ss_dssp HHHTT---------------C---CCSCH-----HHHCEEEEEEEECSSSCEEEEE---EEEEEEBEECHHHHHHHHHHH
T ss_pred hhhcC---------------h---hhhhh-----hcccccceeEEECCCCccccch---hcCCcceeecHHHHHHHHHHH
Confidence 00110 0 12221 1122222222111111122211 123467889999999999999
Q ss_pred hccCC-eEEecc-eEEEEeCCeEEEcCCcEEEeeEEEecCCCCCCC--C--C------cceEEEEEEE-EE-ecCCcCCC
Q psy10545 455 LGINN-FLFNNK-TVEIITPTSIRINNKKIINANCIIDGRGLKNSQ--F--D------GIYQIFLGQQ-WN-LSSPHGLD 520 (1428)
Q Consensus 455 ~~~~~-~~~~~~-~v~~i~~~~v~l~~g~~~~a~lvI~AdG~~S~~--~--~------~~~q~~~g~~-~~-~~~~~~~~ 520 (1428)
+.+.| .++... .+++++. ...++++||+|||.+|.. . . ...|..+... +. +..|. .
T Consensus 132 ~~~~Gv~v~~~~v~~~~l~~--------~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~--~ 201 (430)
T 3ihm_A 132 LEARGGKFCYDAVSAEDLEG--------LSEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAP--I 201 (430)
T ss_dssp HHHTTCEEEECCCCGGGHHH--------HHTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCS--S
T ss_pred HHHcCCEEEEEecchhhhhh--------hcccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCC--c
Confidence 98877 343311 1111110 012589999999998751 0 0 1112222222 11 12121 1
Q ss_pred CceEEecccCCCCCcceEEEEeeCC--CCceEEEeEEeccC------CC----CCHHHHHHHHHHHHHHcCCccce-eee
Q psy10545 521 IPIIMDATVNQKNDEYHFIYTLPLT--PNSLMIEDTRYTKK------PF----LKIDMLKKSIKDYAIKNRWKLKN-IER 587 (1428)
Q Consensus 521 ~~~~~~~~~~~~~~g~~f~~~lPl~--~~~~~v~~~~~~~~------~~----~~~~~~~~~l~~~~~~~~~~~~~-~~~ 587 (1428)
..+.+... .+.+.++++|+. ++..++........ .. .+.+++.+.+.+.+..+.....+ +..
T Consensus 202 ~~~~~~~~-----~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (430)
T 3ihm_A 202 RAVTMSFS-----PGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDP 276 (430)
T ss_dssp CCEEEEEE-----TTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCT
T ss_pred Ceeeeeec-----CCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhh
Confidence 11111111 122334566642 23333222211111 01 14555555555544432111111 100
Q ss_pred ee------------eeeecccCCchhhhhccCccc-ccccccccccCCCCChHHHHHHHHHHHhhcccC
Q psy10545 588 EE------------IGSIPIALKNEKIIKFKKTIC-VGLRANLLHATTGYSLPIAIQLAENIAKYSITT 643 (1428)
Q Consensus 588 ~~------------~~~~Pl~~~~~~~~~~~rv~l-vGdAA~~vhP~~G~G~~~a~~la~~l~~~~~~~ 643 (1428)
.+ ...+|+..........+|+++ +|||||.++|++|||++.++..|..|++++...
T Consensus 277 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~ 345 (430)
T 3ihm_A 277 AEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH 345 (430)
T ss_dssp TTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC
T ss_pred chhccccCccceeecceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc
Confidence 00 124454333332234578887 999999999999999887777777777766643
No 67
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.28 E-value=2.1e-10 Score=137.97 Aligned_cols=228 Identities=17% Similarity=0.175 Sum_probs=140.3
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC-CCc--eeEEeccccCccccccccccccCccCccEEEcCCCc
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV-KNH--IWSFHQTVLSSSQYMLIKPLITYSWPSYQVKFPKFN 84 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~-~~~--tw~~w~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 84 (1428)
.|||+|||||||||++|+.|++.+ ++|+|+|+++.. .+. ..+.+..-+..+........+...+....++.+...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G--~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCc
Confidence 599999999999999999999975 899999998766 222 233432211111111223456667778888887654
Q ss_pred ccc--------CccccceehhHHHHHHHHH---cCCE----------------------------EEEec--------CC
Q psy10545 85 RKI--------FSGYYSICSKHLNSYLIRA---LGQQ----------------------------WNLSS--------PH 117 (1428)
Q Consensus 85 ~~~--------~~~Y~~~~~~~~~~~~~~~---~~~~----------------------------~~~~~--------~~ 117 (1428)
..+ +..-.+++...|.+.+.+. .|.+ .++++ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp SCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 422 1122367888888887662 1110 01100 00
Q ss_pred -------CC--------CceEeeecc--------------cCCCCCCceEEEEccCCCCcEEEEEeeecCCCCCCHHHHH
Q psy10545 118 -------GL--------DIPIIMDAT--------------VNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLK 168 (1428)
Q Consensus 118 -------g~--------~~~~~MD~r--------------~~~~~~~~~F~Y~lP~~~~~~liE~T~~~~~~~~~~~~~~ 168 (1428)
|. .....+.++ .... ....+.|+.|.+++.+-|-......... ....++
T Consensus 162 S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~~ 239 (397)
T 3oz2_A 162 SEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSI-APAGYIWVFPKGEGMANVGIGSSINWIH-NRFELK 239 (397)
T ss_dssp CHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTT-STTEEEEEEEEETTEEEEEEEEETTTSC-SHHHHH
T ss_pred cHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeecc-CCCceEEEeecccceeEEEEeeccchhh-hhhhHH
Confidence 11 001111111 1111 2235788899999887765555444444 556677
Q ss_pred HHHHHHHHHc-CCcceeEEEEEEEeecCCCCcchhhcccCceecccccccccCCCCCcHHHHHHHHHHHHHHh
Q psy10545 169 KSIKDYAIKN-RWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYS 240 (1428)
Q Consensus 169 ~~l~~~l~~~-g~~~~~i~~~E~g~iPm~~~~~~~~~~~~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~~ 240 (1428)
+.+.++++.. ++...+..+.+.+.+|+...... -..++++-+|=|||.++|.+|-.+..+.+.+..+|+.+
T Consensus 240 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i 311 (397)
T 3oz2_A 240 NYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMP-ITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVT 311 (397)
T ss_dssp HHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSC-CEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccccccceeeeeeccccccCcccc-eeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHH
Confidence 7777776653 44456777888999999766321 13468999999999999999988777766665555554
No 68
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.12 E-value=2.8e-09 Score=130.62 Aligned_cols=296 Identities=11% Similarity=0.082 Sum_probs=165.0
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC-CCceeEEeccccCcccc-cccc---ccccCccCccEEEc
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV-KNHIWSFHQTVLSSSQY-MLIK---PLITYSWPSYQVKF 80 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~-~~~tw~~w~~~~~~~~~-~~~~---~~~~~~w~~~~~~~ 80 (1428)
..++|++|||||+||+++|+.|++. +.+|+|||+.+.. ...++|.+.-....+.. +... ..+...|....++.
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~--G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRR--GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSS--SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 4579999999999999999999986 4899999998764 22344432110000000 0011 12334555666666
Q ss_pred CCCcccc--CccccceehhHHHHHHHHH-------------------cCCE---E-----------EEecCC--------
Q psy10545 81 PKFNRKI--FSGYYSICSKHLNSYLIRA-------------------LGQQ---W-----------NLSSPH-------- 117 (1428)
Q Consensus 81 ~~~~~~~--~~~Y~~~~~~~~~~~~~~~-------------------~~~~---~-----------~~~~~~-------- 117 (1428)
++....+ +.....++..+|.+.+.+. .+.. + ++++..
T Consensus 82 ~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 82 PDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp TTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred CCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 6533322 3334578888888877652 0111 1 111000
Q ss_pred -------CCCc---------eEe------eecccCCCC------------CCceEEEEccCCCCcEEEEEeeecCCCCC-
Q psy10545 118 -------GLDI---------PII------MDATVNQKN------------DEYHFIYTLPLTPNSLMIEDTRYTKKPFL- 162 (1428)
Q Consensus 118 -------g~~~---------~~~------MD~r~~~~~------------~~~~F~Y~lP~~~~~~liE~T~~~~~~~~- 162 (1428)
|... ... ++...+..+ ..-.|+|++|++++++.|..+........
T Consensus 162 s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~ 241 (453)
T 3atr_A 162 RSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPS 241 (453)
T ss_dssp CTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCCCC
T ss_pred hhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCCCC
Confidence 1111 001 111111100 01136789999999998888877654332
Q ss_pred CHHHHHHHHHHHHHHcCCcceeEEEEEEEeecCCCCcchhhcccCceecccccccccCCCCCcHHHHHHHHHHHHHHhhh
Q psy10545 163 KIDMLKKSIKDYAIKNRWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 242 (1428)
Q Consensus 163 ~~~~~~~~l~~~l~~~g~~~~~i~~~E~g~iPm~~~~~~~~~~~~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~~~~ 242 (1428)
..+.+++.+.++. ..+...++++...+.+|+....+. -...+++-+|=||+.++|.+|..+..+.+.|..+|+.|..
T Consensus 242 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~ 318 (453)
T 3atr_A 242 IHEYYKKYLDKYA--PDVDKSKLLVKGGALVPTRRPLYT-MAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILS 318 (453)
T ss_dssp HHHHHHHHHHHHC--TTEEEEEEEEEEEEEEECSSCCSC-SEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh--hhcCCCeEEeccceeccCCCCCCc-eecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 2344444443331 133445677777789998544221 0246899999999999999999999999988888888753
Q ss_pred c---CCCChhHHHHHHHHhHHHHHhHHHHHHHHHHHhhcccCcchHHHHHHHhc---CChhhHhhh-ccCCCChH
Q psy10545 243 T---NQINSTVLFKLVKKFIINHQKKQRFFCMLNRLFFLSNSRCHLDIMQYFYT---LPDKIIRNF-YANKLSFF 310 (1428)
Q Consensus 243 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~f~~f~~---~~~~~~~~F-l~~~~~~~ 310 (1428)
. .+.....+.+.-..+.....+.+...+.+.+++ .......|++|++ ++...+.+| ..++.+..
T Consensus 319 ~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 389 (453)
T 3atr_A 319 AFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFL----QKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLS 389 (453)
T ss_dssp HHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHH----TTCCHHHHHHHHHTTSSCHHHHHHHHHHCCCCHH
T ss_pred HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCcHhHHHHHHHcCCChHHHHHHhhcCCcccc
Confidence 1 222221221111111111112222333344333 2222456888886 899999999 66666543
No 69
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.11 E-value=1.2e-10 Score=139.40 Aligned_cols=65 Identities=18% Similarity=0.307 Sum_probs=55.4
Q ss_pred ceeeecCc---hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKGG---VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~gG---~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+.+.+| ...++..|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||+||+|++.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 142 ATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred EEEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChhH
Confidence 34444444 4688999999999999999999999999999887 78988888 899999999998874
No 70
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.07 E-value=3.8e-10 Score=134.35 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCC--cEEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNG--QIFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G--~~i~ad~VV~A~~~~~ 988 (1428)
...+.+.|.+.+++.|++|+++++|++|..++++++.|++.+| .++.||.||+|++.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 4688999999999999999999999999998766466888888 4899999999998874
No 71
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.05 E-value=6.7e-10 Score=135.70 Aligned_cols=67 Identities=21% Similarity=0.338 Sum_probs=58.3
Q ss_pred ceeeecC-c---hHHHHHHHHHHHHHcCcEEEeCc---eeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKG-G---VGALIKALIKLFQNLGGNLILNS---QVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~g-G---~~~l~~~L~~~l~~~G~~V~~~~---~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+.+.+ | ...++..|.+.+++.|++|++++ +|++|..+++++++|++.+|+++.||.||+|++.+.
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3444544 4 56889999999999999999999 999999999998889999998999999999998874
No 72
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.99 E-value=3.9e-09 Score=132.18 Aligned_cols=59 Identities=20% Similarity=0.098 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecC---C--cEEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKN---G--QIFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~---G--~~i~ad~VV~A~~~~~ 988 (1428)
...++..|.+.+.++|++|+++++|++|..+++++++|++.+ | .++.||.||+|+|++.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 467899999999999999999999999999999988888764 3 4789999999999875
No 73
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.98 E-value=1.3e-09 Score=130.85 Aligned_cols=65 Identities=18% Similarity=0.223 Sum_probs=56.1
Q ss_pred ceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
|..++......+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||.||+|++...
T Consensus 123 g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 123 GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEETTE-EEEESEEEECCCCSS
T ss_pred CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEECCc-EEEeeEEEECCCCcc
Confidence 444556667889999999999999999999999999988886 77888888 899999999998764
No 74
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.95 E-value=2.9e-09 Score=137.13 Aligned_cols=66 Identities=18% Similarity=0.268 Sum_probs=56.2
Q ss_pred ceeeecCc---hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKGG---VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~gG---~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+++.+| ...++..|.+.+++.|++|+++++|++|..++++ +.|++.+|.++.||.||+|++.+.
T Consensus 405 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 405 GITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCGGGG
T ss_pred cEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-EEEEECCCCEEECCEEEECCCcch
Confidence 34455444 3788999999999999999999999999999988 688888888899999999998773
No 75
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.95 E-value=3.6e-10 Score=139.57 Aligned_cols=128 Identities=19% Similarity=0.221 Sum_probs=84.4
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
..+++|+|+|++|+.+|+.|++.|++|+|||+.+.....+ ..++.+.... ..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~------------~~~~~~~~~~--~l-------------- 143 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHN------------VLHLWPFTIH--DL-------------- 143 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCC------------EEECCHHHHH--HH--------------
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCC------------cccCChhHHH--HH--------------
Confidence 4578999999999999999999999999999986541000 0111111110 00
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEI 469 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~ 469 (1428)
..++.|. +.. .+. ......+++..+.+.|.+.+.+.| .++.+++|++
T Consensus 144 -----~~~g~~~------------------~~~---~~~------~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~ 191 (497)
T 2bry_A 144 -----RALGAKK------------------FYG---RFC------TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTG 191 (497)
T ss_dssp -----HTTTHHH------------------HCT---TTT------CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEE
T ss_pred -----HHcCCcc------------------ccc---ccc------ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 0000000 000 000 112346888999999999998877 6888999999
Q ss_pred EeCC-------eEEE--c-CC--cEEEeeEEEecCCCCCCC
Q psy10545 470 ITPT-------SIRI--N-NK--KIINANCIIDGRGLKNSQ 498 (1428)
Q Consensus 470 i~~~-------~v~l--~-~g--~~~~a~lvI~AdG~~S~~ 498 (1428)
+..+ .|++ . +| .+++|++||+|||.+|..
T Consensus 192 i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 192 LQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp EECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred EEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 9742 2566 3 55 479999999999999763
No 76
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.92 E-value=3.4e-09 Score=129.36 Aligned_cols=60 Identities=20% Similarity=0.345 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 929 GVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 929 G~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
....+.+.|.+.+++.|++|+++++|++|..+++++++|++.+|+++.||.||+|++...
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 357888999999999999999999999999988888899999998899999999998765
No 77
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.92 E-value=2.1e-09 Score=138.60 Aligned_cols=65 Identities=18% Similarity=0.248 Sum_probs=54.8
Q ss_pred ceeeecCc---hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCc-EEEcCEEEEcCCHH
Q psy10545 922 GIWFPKGG---VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQ-IFDADIIVSNADII 987 (1428)
Q Consensus 922 g~~~~~gG---~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~-~i~ad~VV~A~~~~ 987 (1428)
|.+++.+| ...++..|.+.+++.|++|+++++|++|..++++ +.|++.+|+ ++.||.||+|++.+
T Consensus 400 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 400 GIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEEC-CCCCEEESEEEECCGGG
T ss_pred eEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEeCCCcEEEECCEEEECCCcc
Confidence 44555554 3788999999999999999999999999998887 678888887 89999999999877
No 78
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.92 E-value=2.2e-09 Score=129.57 Aligned_cols=66 Identities=20% Similarity=0.349 Sum_probs=55.9
Q ss_pred ceeeecCch---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKGGV---GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~gG~---~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+.+.+|. ..+.+.|.+.+++.|++|+++++|++|..+++++++|++.+| ++.||.||+|++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 162 ATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp EEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 344554443 478899999999999999999999999998888888999888 799999999998864
No 79
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.91 E-value=2.5e-08 Score=124.90 Aligned_cols=64 Identities=17% Similarity=0.224 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCC----eEEEEEecCC---cEEEcCEEEEcCCHHHHHHHhcC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNN----KVNKVHLKNG---QIFDADIIVSNADIINTYRNLLG 995 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~----~v~~V~~~~G---~~i~ad~VV~A~~~~~~~~~Ll~ 995 (1428)
..+...|.+.+++.|++|+++++|++|..+++ + +.|++.++ .++.||.||.|.+....+++.++
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~-v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG-VTARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE-EEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc-EEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 45667788888888999999999999999887 6 45666665 68999999999999887777765
No 80
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.88 E-value=9.4e-09 Score=122.99 Aligned_cols=58 Identities=19% Similarity=0.296 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
...+...|.+.+++.|++|+++++|++|..+++++.+|++.+| ++.||.||+|++.+.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4678899999999999999999999999998888777988888 899999999998874
No 81
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.85 E-value=1.8e-08 Score=118.10 Aligned_cols=170 Identities=5% Similarity=-0.055 Sum_probs=95.4
Q ss_pred eEEecceEEEEeCC--e--EEEcCCcEEE-eeEEEecCCCCCCC--C-----------CcceEEEEEEEEEecCCcCCCC
Q psy10545 460 FLFNNKTVEIITPT--S--IRINNKKIIN-ANCIIDGRGLKNSQ--F-----------DGIYQIFLGQQWNLSSPHGLDI 521 (1428)
Q Consensus 460 ~~~~~~~v~~i~~~--~--v~l~~g~~~~-a~lvI~AdG~~S~~--~-----------~~~~q~~~g~~~~~~~~~~~~~ 521 (1428)
.++++++|++++.+ . |++.+|..+. +++||.|||.+|.. . ...+...+...+..+.++....
T Consensus 121 ~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (336)
T 1yvv_A 121 PVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTPM 200 (336)
T ss_dssp CEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCCC
T ss_pred cEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCCC
Confidence 68889999999743 2 6677887664 99999999997541 1 1123455555666677665443
Q ss_pred ceEEecccCCCCCc-ceEEEE---eeCCCCc--eEEEeEE--ec-cCCCCCHHHHHHHHHHHHHH-cCCccce--eeeee
Q psy10545 522 PIIMDATVNQKNDE-YHFIYT---LPLTPNS--LMIEDTR--YT-KKPFLKIDMLKKSIKDYAIK-NRWKLKN--IEREE 589 (1428)
Q Consensus 522 ~~~~~~~~~~~~~g-~~f~~~---lPl~~~~--~~v~~~~--~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~--~~~~~ 589 (1428)
..++. . ++ .++++. +|..++. .++.... +. ....++++++.+.+.+.+.. +|..... .....
T Consensus 201 ~~~~~-----~-~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~ 274 (336)
T 1yvv_A 201 QGCFV-----Q-DSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAH 274 (336)
T ss_dssp CEEEE-----C-SSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEE
T ss_pred CeEEe-----C-CCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEcc
Confidence 32211 1 22 333332 2544332 2332221 11 12345777888887777654 4433221 11122
Q ss_pred --eeeecccCCchhhh--hccCcccccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 590 --IGSIPIALKNEKII--KFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 590 --~~~~Pl~~~~~~~~--~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
...+|......... ..+|+.++|||+|. .|+++|...+..+++.+.
T Consensus 275 rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~ 324 (336)
T 1yvv_A 275 RWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLL 324 (336)
T ss_dssp EEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHH
T ss_pred ccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHH
Confidence 23456654433211 23899999999963 488877777776666654
No 82
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.84 E-value=2.5e-08 Score=123.85 Aligned_cols=60 Identities=20% Similarity=0.249 Sum_probs=50.5
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCceeeEEEEe-CCeEEEEEecC-Cc--EEEcC-EEEEcCCHHH
Q psy10545 929 GVGALIKALIKLFQNLGGNLILNSQVISIYVN-NNKVNKVHLKN-GQ--IFDAD-IIVSNADIIN 988 (1428)
Q Consensus 929 G~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~-~~~v~~V~~~~-G~--~i~ad-~VV~A~~~~~ 988 (1428)
|...+.+.|.+.+++.|++|+++++|++|..+ ++++++|.+.+ |+ ++.|| .||+|++...
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 33489999999999999999999999999998 68888887754 32 58996 9999998764
No 83
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.83 E-value=2.1e-09 Score=122.26 Aligned_cols=59 Identities=25% Similarity=0.372 Sum_probs=55.9
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcceEEEeCCeEEcccccccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITD 769 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~s~~~~G~~~d~G~~~i~~ 769 (1428)
.+||+|||||++||+||+.|+++|++|+||||++.+||++.+.+..+..+|.|+.++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~~ 60 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTA 60 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCcccccc
Confidence 37999999999999999999999999999999999999999999999999999988764
No 84
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.83 E-value=8e-09 Score=136.09 Aligned_cols=66 Identities=27% Similarity=0.397 Sum_probs=56.5
Q ss_pred ceeeecCc---hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKGG---VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~gG---~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+.+.+| ...++..|.+.+++.|++|+++++|++|..+++++++|.+.+| ++.||.||+|++.+.
T Consensus 139 g~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 139 GLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred EEEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 34444443 4578999999999999999999999999999998888999888 799999999998875
No 85
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.82 E-value=9.4e-08 Score=115.32 Aligned_cols=232 Identities=13% Similarity=0.001 Sum_probs=134.6
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC--CCceeEEeccccCcccc-ccccccc--cCccCccEEEc
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV--KNHIWSFHQTVLSSSQY-MLIKPLI--TYSWPSYQVKF 80 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~--~~~tw~~w~~~~~~~~~-~~~~~~~--~~~w~~~~~~~ 80 (1428)
...||++|||||+|||++|+.|++.+ .+|+|+|+.+.. ..+.+++|..-...+.. +.++.+. ...+..+.++.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 98 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSG--IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRD 98 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEE
Confidence 34699999999999999999999974 799999998765 35666766431111111 1112221 12344455555
Q ss_pred CC-Cccc-----------cCccccceehhHHHHHHHHHcC-----------------CEEEEe--------c--------
Q psy10545 81 PK-FNRK-----------IFSGYYSICSKHLNSYLIRALG-----------------QQWNLS--------S-------- 115 (1428)
Q Consensus 81 ~~-~~~~-----------~~~~Y~~~~~~~~~~~~~~~~~-----------------~~~~~~--------~-------- 115 (1428)
.. .... ....+..++..+|.+.+.+... ..+.+. .
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 99 FRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCC
Confidence 43 2211 1245778899999998877311 111111 0
Q ss_pred CC--------CCC-ce---------EeeecccCCC-CC-------CceEEEEccCCCCcEEEEEeeecCCC-CCCHHHHH
Q psy10545 116 PH--------GLD-IP---------IIMDATVNQK-ND-------EYHFIYTLPLTPNSLMIEDTRYTKKP-FLKIDMLK 168 (1428)
Q Consensus 116 ~~--------g~~-~~---------~~MD~r~~~~-~~-------~~~F~Y~lP~~~~~~liE~T~~~~~~-~~~~~~~~ 168 (1428)
.+ |.. .+ .+.+...... .. .-.++|++|+++++..+..+...+.. ..+.+...
T Consensus 179 ~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (407)
T 3rp8_A 179 SHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLR 258 (407)
T ss_dssp TTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTHH
T ss_pred cChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhHH
Confidence 00 111 10 1111111110 01 11467899999999888887764332 22334455
Q ss_pred HHHHHHHHHcCC---------cceeEEEEEEEeecCCCCcchhhcccCceecccccccccCCCCCcHHHHHHHHHHHHHH
Q psy10545 169 KSIKDYAIKNRW---------KLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKY 239 (1428)
Q Consensus 169 ~~l~~~l~~~g~---------~~~~i~~~E~g~iPm~~~~~~~~~~~~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~ 239 (1428)
+.+.+++....- ....+ ....++|+.....+ ...+++-+|=|++.++|.+|..+..+.+.|..+++.
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~ 334 (407)
T 3rp8_A 259 ADLSRYFAGWAPPVQKLIAALDPQTT--NRIEIHDIEPFSRL--VRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAV 334 (407)
T ss_dssp HHHHHHTTTCCHHHHHHHHHSCGGGC--EEEEEEECCCCSCC--EETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHcCCccce--eEEeeEecCCCCce--ecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHH
Confidence 555554332110 11111 23667777654222 246899999999999999999999999999999999
Q ss_pred hhhc
Q psy10545 240 SITT 243 (1428)
Q Consensus 240 ~~~~ 243 (1428)
|...
T Consensus 335 L~~~ 338 (407)
T 3rp8_A 335 FRQT 338 (407)
T ss_dssp HHSC
T ss_pred HhcC
Confidence 9743
No 86
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.79 E-value=4.6e-08 Score=123.20 Aligned_cols=58 Identities=14% Similarity=0.174 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CeEEEEEec--CCc--EEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNN-NKVNKVHLK--NGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~-~~v~~V~~~--~G~--~i~ad~VV~A~~~~~ 988 (1428)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||+|++...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 6788999999999999999999999999887 888888765 675 689999999998753
No 87
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.79 E-value=7.8e-09 Score=123.21 Aligned_cols=65 Identities=20% Similarity=0.303 Sum_probs=53.2
Q ss_pred ceeeecCc---hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 922 GIWFPKGG---VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 922 g~~~~~gG---~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+.+.+| ...+++.|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||.||+|++.+.
T Consensus 137 ~~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 137 GLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp EEEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSC-EEEEEEEEECCGGGG
T ss_pred EEEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEEECCC-eEEcCEEEEcCCccH
Confidence 33444444 3678899999999999999999999999988776 56888888 599999999998764
No 88
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.78 E-value=2.7e-08 Score=119.16 Aligned_cols=64 Identities=11% Similarity=0.208 Sum_probs=52.1
Q ss_pred eeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEe----CCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 923 IWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVN----NNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 923 ~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~----~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
..++......+.+.|.+.+++.|++|+++++|++|..+ +++ +.|++.+| ++.||.||+|++...
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSS
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCcc
Confidence 33444355778889999999999999999999999877 555 67888777 799999999997654
No 89
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.77 E-value=4.5e-08 Score=123.13 Aligned_cols=60 Identities=22% Similarity=0.224 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CeEEEEEec--CCc--EEEcCEEEEcCCHHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNN-NKVNKVHLK--NGQ--IFDADIIVSNADIINT 989 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~-~~v~~V~~~--~G~--~i~ad~VV~A~~~~~~ 989 (1428)
...+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||+|++....
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 46788999999999999999999999999988 888888775 675 6899999999987653
No 90
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.76 E-value=3.3e-09 Score=127.00 Aligned_cols=56 Identities=16% Similarity=0.210 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
..+.+.|.+.+++.|++|+++++|++|..+++++ .|++.+| ++.||.||+|++.+.
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 6788999999999999999999999999888775 7888877 899999999998864
No 91
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.76 E-value=6.5e-09 Score=127.27 Aligned_cols=58 Identities=12% Similarity=0.241 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEE---------------eCCeEEEEEecCCcEE--EcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYV---------------NNNKVNKVHLKNGQIF--DADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~---------------~~~~v~~V~~~~G~~i--~ad~VV~A~~~~~ 988 (1428)
...+...|.+.+++.|++|+++++|++|.. +++++++|.+.+| ++ .||.||+|++.+.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 458899999999999999999999999998 5667778988888 68 9999999998874
No 92
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.75 E-value=6.5e-08 Score=116.30 Aligned_cols=55 Identities=20% Similarity=0.236 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+...|.+.+++.|++|+++++|++|..++++ +.|.+.+| ++.||.||+|++.+
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADG-VSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-EEEEECCC-EEEcCEEEEcCCcC
Confidence 578888999999999999999999999988887 45777666 79999999999886
No 93
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.72 E-value=4.7e-08 Score=117.18 Aligned_cols=56 Identities=20% Similarity=0.325 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
..++..|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||.||+|++.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EEEEeCCC-EEEeCEEEEecCccH
Confidence 678899999999999999999999999988776 56777776 799999999998864
No 94
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.71 E-value=5.8e-08 Score=110.69 Aligned_cols=41 Identities=29% Similarity=0.494 Sum_probs=37.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhC-CCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTA-GISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~-G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++||+||+.|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999887743
No 95
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.70 E-value=1.1e-07 Score=113.43 Aligned_cols=62 Identities=24% Similarity=0.429 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+.+.|.+.+++.|++|+++++|++|.. ++ .|++.+|+++.||.||.|.+.....++.+..
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~ 168 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-VG---RLTLQTGEVLEADLIVGADGVGSKVRDSIGF 168 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-TT---EEEETTSCEEECSEEEECCCTTCHHHHHHCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC---EEEECCCCEEEcCEEEECCCccHHHHHHhcC
Confidence 46677788888888999999999999987 44 5778889899999999999998777766653
No 96
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.69 E-value=1.1e-07 Score=114.19 Aligned_cols=60 Identities=12% Similarity=0.176 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcC
Q psy10545 933 LIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLG 995 (1428)
Q Consensus 933 l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~ 995 (1428)
+.+.|.+.+ .|++|+++++|++|..++++ +.|++.+|+++.||.||.|.|.....++.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSET-VQMRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSC-EEEEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCE-EEEEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 344444444 37999999999999988877 5688899999999999999999887776665
No 97
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.67 E-value=9.1e-08 Score=115.99 Aligned_cols=66 Identities=17% Similarity=0.188 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeE-EEEEecCCc--EEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKV-NKVHLKNGQ--IFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v-~~V~~~~G~--~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+...|.+.+++.|++|+++++|++|..+++++ +.|.+.+|+ ++.||.||.|.|....++++++.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~ 174 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGL 174 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCC
Confidence 4566778888888899999999999999987653 566678887 69999999999988777666653
No 98
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.67 E-value=2.9e-08 Score=122.40 Aligned_cols=58 Identities=17% Similarity=0.315 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
..+.+.|.+.+++.|++|+++++|++|..+++++++|++.+|+++.||.||+|++...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 5677888899999999999999999999998888899999999999999999998764
No 99
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.66 E-value=9.9e-08 Score=114.77 Aligned_cols=66 Identities=12% Similarity=0.285 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHc-CcEEEeCceeeEEEEeCCeEE-EEEecCCcEEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQNL-GGNLILNSQVISIYVNNNKVN-KVHLKNGQIFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~-G~~V~~~~~V~~I~~~~~~v~-~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+.+.|.+.+++. |++|+++++|++|..++++++ .|++.+|+++.||.||.|.+.....++.++.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~ 174 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLD 174 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSC
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCC
Confidence 46777888888887 899999999999998887743 7888899899999999999998877767653
No 100
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.64 E-value=9.7e-08 Score=119.70 Aligned_cols=65 Identities=12% Similarity=0.182 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec-CC--cEEEcCEEEEcCCHHHHHHHhcC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK-NG--QIFDADIIVSNADIINTYRNLLG 995 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~-~G--~~i~ad~VV~A~~~~~~~~~Ll~ 995 (1428)
..+...|.+.+++.|++|+++++|++|..+++++++|++. +| .++.||.||.|.|....++..++
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg 195 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLG 195 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcC
Confidence 4677788888888999999999999999876666888887 67 57999999999998876665554
No 101
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.62 E-value=3.5e-07 Score=109.20 Aligned_cols=234 Identities=10% Similarity=-0.043 Sum_probs=128.4
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC--CCceeEEeccccCc-cccccc-cc-cc--cCccCccEEEcC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV--KNHIWSFHQTVLSS-SQYMLI-KP-LI--TYSWPSYQVKFP 81 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~--~~~tw~~w~~~~~~-~~~~~~-~~-~~--~~~w~~~~~~~~ 81 (1428)
.|++|||||+|||++|+.|++..|+.+|+|+|+.+.. ......++..-... ...... +. +. ...|....+...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3899999999999999999998667999999998655 23344444321110 001111 22 21 224555555553
Q ss_pred CCcc--ccCccccceehhHHHHHHHHH---cCCEEEE---------------------e---cC--C-----CCCce---
Q psy10545 82 KFNR--KIFSGYYSICSKHLNSYLIRA---LGQQWNL---------------------S---SP--H-----GLDIP--- 122 (1428)
Q Consensus 82 ~~~~--~~~~~Y~~~~~~~~~~~~~~~---~~~~~~~---------------------~---~~--~-----g~~~~--- 122 (1428)
+... ....+|..+...+|.+.+.+. .|.++.. + +. . |.+..
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~~ad~vV~AdG~~S~R~~l~~~~g~~~~~~~ 160 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGELPLADYDLVVLANGVNHKTAHFTEALVPQVDYGR 160 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGCCGGGCSEEEECCGGGGGTCCSSGGGCCCCEEEE
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhcccccCCEEEECCCCCchHHhhhhhcCCCcccCC
Confidence 2111 113457789999999988763 1222211 0 00 0 11110
Q ss_pred Eeeeccc--CCC----------CCCceEEEEccCCCCcEEE--EEee----ecCCCCCCHHHHHHHHHHHHHHcCCccee
Q psy10545 123 IIMDATV--NQK----------NDEYHFIYTLPLTPNSLMI--EDTR----YTKKPFLKIDMLKKSIKDYAIKNRWKLKN 184 (1428)
Q Consensus 123 ~~MD~r~--~~~----------~~~~~F~Y~lP~~~~~~li--E~T~----~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 184 (1428)
...-|+. ... ..|..++|.+|+++++..+ +.+- ....+.++.+...+.+.+++...... .+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 239 (381)
T 3c4a_A 161 NKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGG-HG 239 (381)
T ss_dssp EEEEEEEESSCCSSEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTT-CC
T ss_pred ccEEEEecCCCCCcceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCC-ch
Confidence 0011110 000 0233445679998877533 2100 01112335667777777776653211 12
Q ss_pred EEEEEEEeecCCCCcchhh-cccCceecccccccccCCCCCcHHHHHHHHHHHHHHhhhc
Q psy10545 185 IEREEIGSIPIALKNEKII-KFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSITT 243 (1428)
Q Consensus 185 i~~~E~g~iPm~~~~~~~~-~~~~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~~~~~ 243 (1428)
+++.+....|+....+.+. ...++.-+|=|++.++|.+|+.+..+.+.|..+|+.|...
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~ 299 (381)
T 3c4a_A 240 LVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE 299 (381)
T ss_dssp CBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS
T ss_pred hhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc
Confidence 3222111122211101001 2367999999999999999999999999999999999754
No 102
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.60 E-value=3.3e-07 Score=110.74 Aligned_cols=57 Identities=23% Similarity=0.272 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
...+.+.+.+.+++.|++|+++++|++|..+++++.+|++.+|+++.||.||++++.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 467888899999999999999999999998888888999999999999999999975
No 103
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.59 E-value=1.1e-07 Score=119.15 Aligned_cols=59 Identities=12% Similarity=0.186 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec---CCc--EEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK---NGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~---~G~--~i~ad~VV~A~~~~~ 988 (1428)
...++..+++.+.++|++|+++++|++|..+++++++|++. +|+ ++.||.||+|++++.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 35688888899999999999999999999999888888863 343 699999999999885
No 104
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.58 E-value=3.1e-07 Score=113.34 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCc---EEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQ---IFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~---~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+|+ ++.||.||.|.+.....++.++.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~ 173 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-VTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGF 173 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCC
Confidence 356677888888889999999999999998887 447776664 79999999999999888877763
No 105
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.57 E-value=2.5e-07 Score=106.21 Aligned_cols=41 Identities=32% Similarity=0.426 Sum_probs=37.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhC--CCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTA--GISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~--G~~V~VlEa~~~~GGr~ 750 (1428)
..+||+|||||++||+||+.|+++ |++|+|+|+++.+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 458999999999999999999997 99999999998887744
No 106
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.56 E-value=5.8e-07 Score=112.89 Aligned_cols=59 Identities=25% Similarity=0.266 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CeEEEEEec--CCc--EEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNN-NKVNKVHLK--NGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~-~~v~~V~~~--~G~--~i~ad~VV~A~~~~~ 988 (1428)
...+...|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||+|++...
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 45788999999999999999999999999887 888888775 674 689999999998643
No 107
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.56 E-value=3.7e-07 Score=112.66 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCc---EEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQ---IFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~---~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+|+ ++.||.||.|.+.....++.++.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~ 174 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGDH-VVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGF 174 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCC
Confidence 456677888888889999999999999988877 447777764 79999999999999888877754
No 108
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.56 E-value=3e-07 Score=114.17 Aligned_cols=105 Identities=13% Similarity=0.040 Sum_probs=62.3
Q ss_pred eEEEEccCCCCcEEEEEeeecCCC----CCCHHHHHHHHHHH--HHH-cCCcceeEEEEEEEeecCCCCc--chhh-ccc
Q psy10545 137 HFIYTLPLTPNSLMIEDTRYTKKP----FLKIDMLKKSIKDY--AIK-NRWKLKNIEREEIGSIPIALKN--EKII-KFK 206 (1428)
Q Consensus 137 ~F~Y~lP~~~~~~liE~T~~~~~~----~~~~~~~~~~l~~~--l~~-~g~~~~~i~~~E~g~iPm~~~~--~~~~-~~~ 206 (1428)
.|+|.+|++++++.|-.++-.... ..+.+.+++.++.. +.+ .. ....+.....+.||+.... +..+ ..+
T Consensus 218 G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 296 (512)
T 3e1t_A 218 GWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLA-PATRVTTGDYGEIRIRKDYSYCNTSFWKN 296 (512)
T ss_dssp EEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHT-TCEECCSSTTSSCEEEESCCEEESCSBCS
T ss_pred ceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHh-cCccccccccccceeeccccccccccccC
Confidence 479999999998777766644322 11233333333211 111 00 0111112223445543210 0000 246
Q ss_pred CceecccccccccCCCCCcHHHHHHHHHHHHHHhhh
Q psy10545 207 KTICVGLRANLLHATTGYSLPIAIQLAENIAKYSIT 242 (1428)
Q Consensus 207 ~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~~~~ 242 (1428)
+++.+|-|+++++|.+|+.+..+.+.|..+++.|..
T Consensus 297 ~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~ 332 (512)
T 3e1t_A 297 GMALVGDAACFVDPVFSSGVHLATYSALLVARAINT 332 (512)
T ss_dssp SEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999988853
No 109
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.51 E-value=2e-07 Score=109.21 Aligned_cols=45 Identities=27% Similarity=0.282 Sum_probs=38.8
Q ss_pred ccccceeeecCCCcchHHHHHHHHhCCCeEEEEcc----CCCCCCcceE
Q psy10545 708 SFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQ----RDKPGGRAYV 752 (1428)
Q Consensus 708 ~~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa----~~~~GGr~~s 752 (1428)
...++||+|||||++||+||+.|++.|++|+|+|+ +..+||....
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 34568999999999999999999999999999999 4588887653
No 110
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.50 E-value=1.3e-07 Score=113.79 Aligned_cols=60 Identities=13% Similarity=0.249 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhc
Q psy10545 932 ALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLL 994 (1428)
Q Consensus 932 ~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll 994 (1428)
.+.+.|.+.++ +++|+++++|++|..++++ +.|++.+|+++.||.||.|.|.....++.+
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGKKK-WTLTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECSSS-EEEEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECCCE-EEEEECCCcEEecCEEEECCCcchhHHhhc
Confidence 34445555443 3689999999999988776 568888998899999999998876554444
No 111
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.49 E-value=9e-07 Score=109.50 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec---CCc--EEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK---NGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~---~G~--~i~ad~VV~A~~~~~ 988 (1428)
...++..|.+.+.++|++|+++++|++|..++ ++++|++. +|+ ++.||.||+|++++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 46789999999999999999999999999887 45788773 575 789999999999885
No 112
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.49 E-value=2.2e-07 Score=115.50 Aligned_cols=57 Identities=12% Similarity=0.304 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCc--EEEeCceeeEEEEeCC-eEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGG--NLILNSQVISIYVNNN-KVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~--~V~~~~~V~~I~~~~~-~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|+ +|+++++|+++..+++ +.+.|++++|+++.||.||+|+|..
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 3455566666777787 8999999999998865 3478999999999999999999853
No 113
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.48 E-value=1.3e-07 Score=111.63 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
..+.+.+.+.+++.|++++++++|++|..++++..+|++++| ++.+|+||+|++...
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 345556677778889999999999999999887333888888 899999999998643
No 114
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.48 E-value=2.2e-07 Score=111.53 Aligned_cols=65 Identities=12% Similarity=0.210 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEe-cCCc--EEEcCEEEEcCCHHHHHHHhcC
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHL-KNGQ--IFDADIIVSNADIINTYRNLLG 995 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~-~~G~--~i~ad~VV~A~~~~~~~~~Ll~ 995 (1428)
..+.+.|.+.+.+.|++|+++++|++|..+++..+.|++ .+|+ ++.||.||.|.+.....++.++
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 345667777777789999999999999876433355766 6887 7999999999998876665554
No 115
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.48 E-value=2.4e-07 Score=115.41 Aligned_cols=56 Identities=14% Similarity=0.204 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCc--EEEeCceeeEEEEeCC-eEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 932 ALIKALIKLFQNLGG--NLILNSQVISIYVNNN-KVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 932 ~l~~~L~~~l~~~G~--~V~~~~~V~~I~~~~~-~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
.+.+.+.+.+++.|. +++++++|+++..+++ +.+.|++++|+++.||.||+|+|..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 444555666667776 8999999999998765 3478899999999999999999853
No 116
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.48 E-value=1.3e-06 Score=109.77 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEe-CCeEEEEEe---cCCc--EEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVN-NNKVNKVHL---KNGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~-~~~v~~V~~---~~G~--~i~ad~VV~A~~~~~ 988 (1428)
..+...|.+.+++.|++|+++++|++|..+ ++++++|.+ .+|+ ++.|+.||+|++...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 678889999999999999999999999986 778888875 4565 589999999998754
No 117
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.47 E-value=1.3e-06 Score=105.17 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
...+.+.+.+.+++.|++|+++++|++|..+++++.+|++.+|+++.||.||++++.
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 467888899999999999999999999999888888999999999999999999975
No 118
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.47 E-value=6e-07 Score=98.95 Aligned_cols=55 Identities=16% Similarity=0.143 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHc-CcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNL-GGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~-G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.|.+.+++. |++++ +++|++|..+++++++|.+.+|+++.||.||+|++.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTT
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCC
Confidence 34556777788886 89998 679999999998888899999988999999999976
No 119
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.46 E-value=1.7e-07 Score=116.60 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=38.9
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
+.++||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 456899999999999999999999999999999999999854
No 120
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.45 E-value=6.8e-07 Score=102.06 Aligned_cols=41 Identities=27% Similarity=0.396 Sum_probs=37.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhC--CCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTA--GISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~--G~~V~VlEa~~~~GGr~ 750 (1428)
..+||+|||||++||+||+.|++. |++|+|+|+++.+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 457999999999999999999998 99999999999988744
No 121
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.44 E-value=1.8e-06 Score=108.49 Aligned_cols=62 Identities=13% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CeEEEEEec------CC---------cEEEcCEEEEcCCHHHHHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNN-NKVNKVHLK------NG---------QIFDADIIVSNADIINTYRN 992 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~-~~v~~V~~~------~G---------~~i~ad~VV~A~~~~~~~~~ 992 (1428)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +| .++.||.||.|.+....+++
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~ 221 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAK 221 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHH
Confidence 5677888888999999999999999999876 567788876 33 58999999999998765543
No 122
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.44 E-value=9.1e-07 Score=106.70 Aligned_cols=64 Identities=23% Similarity=0.251 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHH-cC-cEEEeCceeeEEEEeCCeEEEEEecC---C--cEEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQN-LG-GNLILNSQVISIYVNNNKVNKVHLKN---G--QIFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~-~G-~~V~~~~~V~~I~~~~~~v~~V~~~~---G--~~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+.+.|.+.+.+ .| ++|+++++|++|.. +++ +.|++.+ | +++.||.||.|.|.....++.+..
T Consensus 107 ~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~ 177 (410)
T 3c96_A 107 GELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHP 177 (410)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCT
T ss_pred HHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCEEEECCCccchhHHHhcC
Confidence 3566677777766 36 58999999999988 554 4466554 7 579999999999998887776653
No 123
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.42 E-value=4.7e-06 Score=99.35 Aligned_cols=184 Identities=11% Similarity=0.041 Sum_probs=107.8
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeCCe----EEEcCCcEEEeeEEEecCCCCCCC----CC--cceEEEEE
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITPTS----IRINNKKIINANCIIDGRGLKNSQ----FD--GIYQIFLG 508 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~~----v~l~~g~~~~a~lvI~AdG~~S~~----~~--~~~q~~~g 508 (1428)
..++...+.+.|.+.+.+.| .++.+++|+++..++ |++.+| +++|+.||.|+|..|.. .. .......+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g 237 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKG 237 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccce
Confidence 55778899999999998888 688889999986432 555555 89999999999998641 11 11222333
Q ss_pred EEEEecCCcCCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEecc-CCCCCHHHHHHHHHHHHHH-cC-Ccccee
Q psy10545 509 QQWNLSSPHGLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTK-KPFLKIDMLKKSIKDYAIK-NR-WKLKNI 585 (1428)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~-~~~~~~~~~~~~l~~~~~~-~~-~~~~~~ 585 (1428)
..+.++.+.......+++ . ..|+.|..++.+.++.+.... .......+..+.+.+.+.+ ++ +...++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-------~---~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~ 307 (382)
T 1ryi_A 238 ECLSVWNDDIPLTKTLYH-------D---HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKV 307 (382)
T ss_dssp EEEEEECCSSCCCSEEEE-------T---TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGGGSEE
T ss_pred EEEEECCCCCCccceEEc-------C---CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcCCCce
Confidence 333333332111112211 0 257889877777776643211 1111122223333333333 22 111233
Q ss_pred eeeeeeeecccCCchhhhhccCcccccccc-----cccccCCCCChHHHHHHHHHHHhhccc
Q psy10545 586 EREEIGSIPIALKNEKIIKFKKTICVGLRA-----NLLHATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 586 ~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA-----~~vhP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
...-.+..|+. .++..++|++. ....+.+|.||..+...++.+++.+..
T Consensus 308 ~~~w~g~~~~t--------~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 308 DRFWAGLRPGT--------KDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp EEEEEEEEEEC--------SSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred eeEEEEecccC--------CCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 33334556653 24566778763 235678899999999999999988764
No 124
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.42 E-value=4.7e-07 Score=104.36 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcC
Q psy10545 933 LIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNA 984 (1428)
Q Consensus 933 l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~ 984 (1428)
+...+.+.+++.|++++.++ |+.+..+++++..|++.+|+++.+|.||+++
T Consensus 182 ~~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 182 LSQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CCHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECC
T ss_pred chhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeee
Confidence 44566777888999998764 8888877777788999999999999888876
No 125
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.42 E-value=1.1e-06 Score=101.86 Aligned_cols=56 Identities=20% Similarity=0.152 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecC----C--cEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKN----G--QIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~----G--~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|..+++++.+|++.+ | +++.+|.||++++.
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 45677788888889999999999999998776777787754 4 57999999999964
No 126
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.41 E-value=1.5e-06 Score=106.94 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
...+.+.+.+.+++.|++|+++++|++|..+++++. |++.+|+++.+|.||+|++..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEEESSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 467788899999999999999999999988777744 778899999999999999753
No 127
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.41 E-value=2.1e-06 Score=108.69 Aligned_cols=58 Identities=12% Similarity=0.110 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEe---cCCc--EEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHL---KNGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~---~~G~--~i~ad~VV~A~~~~~ 988 (1428)
..+...|.+.+.+.|++|++++.|++|..+++++.+|.+ .+|+ .+.|+.||+|++...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 578899999999999999999999999998898888765 4675 489999999998764
No 128
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.39 E-value=4.3e-07 Score=111.32 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEE-ecCCcEEEcCEEEEcCCHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVH-LKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~-~~~G~~i~ad~VV~A~~~~ 987 (1428)
...+.+.+.+.+++.|++|+++++|++|..++++.+.|+ +++|+ +.+|.||+|++..
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 456788899999999999999999999998765546788 88997 9999999999753
No 129
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.38 E-value=8e-07 Score=103.18 Aligned_cols=52 Identities=21% Similarity=0.205 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 934 IKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 934 ~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
.+.+.+.+++.|+++++ ++|++|..+++. +.|.+.+|+++.+|.||+|++..
T Consensus 73 ~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 73 IKVFNKHIEKYEVPVLL-DIVEKIENRGDE-FVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHTTTCCEEE-SCEEEEEEC--C-EEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHcCCEEEE-EEEEEEEecCCE-EEEEECCCCEEEcCEEEECcCCC
Confidence 34455556677899999 899999987765 67888888899999999999865
No 130
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.38 E-value=2.5e-06 Score=105.20 Aligned_cols=55 Identities=24% Similarity=0.200 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++ +.|++.+|+++.+|.||+|++.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENC-YNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSS-EEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCE-EEEEECCCcEEEcCEEEEeeCC
Confidence 567788888899999999999999999988776 5788899989999999999975
No 131
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.37 E-value=6.6e-07 Score=104.67 Aligned_cols=52 Identities=15% Similarity=0.257 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 934 IKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 934 ~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
.+.+.+.+++.|++++++++|++|..+++. +.|.+.+|+++.+|.||+|++.
T Consensus 68 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 68 VKGLVEQVAPFNPVYSLGERAETLEREGDL-FKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHGGGCCEEEESCCEEEEEEETTE-EEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHcCCEEEeCCEEEEEEECCCE-EEEEECCCCEEEeCEEEECCCC
Confidence 334455566668999999999999988774 6788888888999999999976
No 132
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.37 E-value=7.8e-07 Score=111.19 Aligned_cols=42 Identities=26% Similarity=0.310 Sum_probs=38.9
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
+.++||+|||||++||++|+.|++.|++|+|+|+++.+||.+
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 446899999999999999999999999999999999999865
No 133
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.36 E-value=2.8e-06 Score=106.74 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEe---cCCc--EEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHL---KNGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~---~~G~--~i~ad~VV~A~~~~~ 988 (1428)
..+...|.+.+.+.|++|+++++|++|..+++++.+|.+ .+|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 578899999998899999999999999999999888876 3675 689999999998764
No 134
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.35 E-value=1.2e-06 Score=105.46 Aligned_cols=52 Identities=13% Similarity=0.126 Sum_probs=43.5
Q ss_pred CcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 945 GGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 945 G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
+.+|+++++|+++...++..+.|+++||+++.||.||-|-|.....++.+..
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~ 174 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLP 174 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHST
T ss_pred cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCC
Confidence 4579999999999876554477899999999999999999998887766653
No 135
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.34 E-value=6.5e-07 Score=105.92 Aligned_cols=54 Identities=13% Similarity=0.274 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 933 LIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 933 l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
+.+.+.+.+++.|++++++++|++|..++++.+.|.+.+|+++.+|.||+|++.
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCC
Confidence 334455566677899999999999998765346788888989999999999976
No 136
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.33 E-value=5.2e-07 Score=105.25 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 932 ALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 932 ~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
.+...+.+.+++.|++++++++|++|..++++.+.|.+.+|+ +.+|+||+|++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 68 ELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 344455566667789999999999999887644778888885 999999999976
No 137
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.33 E-value=2.3e-06 Score=105.74 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHH-cCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQN-LGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~-~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.|.+.+++ .|++| ++++|++|..+++++++|.+.+|+++.||.||+|+|..
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 4567788888887 59999 57899999999999889999999999999999999875
No 138
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.31 E-value=2.8e-06 Score=105.67 Aligned_cols=58 Identities=10% Similarity=0.079 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHH-cCcEEEeCceeeEEEE-eCC------eEEEEEec---CCc--EEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQN-LGGNLILNSQVISIYV-NNN------KVNKVHLK---NGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~-~G~~V~~~~~V~~I~~-~~~------~v~~V~~~---~G~--~i~ad~VV~A~~~~~ 988 (1428)
..+.+.|.+.+++ .|++|+++++|++|.. +++ ++.+|.+. +|+ ++.|+.||+|++...
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 4567778888888 6999999999999998 545 78888764 565 689999999998764
No 139
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.30 E-value=1.8e-06 Score=103.90 Aligned_cols=57 Identities=21% Similarity=0.226 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceee---------EEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVI---------SIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~---------~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
...+...|.+.+++.|++|+++++|+ +|..+++++ +|++.+| ++.||.||+|++.+.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 36788999999999999999999999 888777764 7877777 899999999998874
No 140
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.30 E-value=2.2e-06 Score=107.08 Aligned_cols=58 Identities=17% Similarity=0.334 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CeEEEEEecCCcEEEcCEEEEcCCHHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNN-NKVNKVHLKNGQIFDADIIVSNADIINT 989 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~-~~v~~V~~~~G~~i~ad~VV~A~~~~~~ 989 (1428)
..+.+.|.+.+++.|++++.+ +|++|..++ +.++.|++.+|+++.||.||.|.|....
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 678888999999999999999 899998864 4467888989988999999999987654
No 141
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.29 E-value=6.8e-06 Score=102.78 Aligned_cols=228 Identities=12% Similarity=0.071 Sum_probs=117.2
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC--CCceeEEeccccCccc-cccccccccCc-------cCcc
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV--KNHIWSFHQTVLSSSQ-YMLIKPLITYS-------WPSY 76 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~--~~~tw~~w~~~~~~~~-~~~~~~~~~~~-------w~~~ 76 (1428)
.++||+|||||++||++|+.|++.+ ++|+|||+.+.. ..+..+++..-...+. .+.++.+.... |...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G--~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGG--VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTT--CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 4689999999999999999999964 799999988655 2444444432111000 01122222221 1111
Q ss_pred ---EEEcCCCccccCccc-cceehhHHHHHHHHH-------------------cCC--EEEE---------ecCC-----
Q psy10545 77 ---QVKFPKFNRKIFSGY-YSICSKHLNSYLIRA-------------------LGQ--QWNL---------SSPH----- 117 (1428)
Q Consensus 77 ---~~~~~~~~~~~~~~Y-~~~~~~~~~~~~~~~-------------------~~~--~~~~---------~~~~----- 117 (1428)
.+... .....++| .+++..++.+.|.+. .+. .+.+ +...
T Consensus 126 ~~~~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 126 FTQGLDFG--LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp CTTCCBGG--GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECS
T ss_pred cccccccc--ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcC
Confidence 11000 00113333 457888888877662 011 1111 1000
Q ss_pred ----------CC--------CceEeeecccCCCC-------CCceEEEE-ccCCCCcE-EEEEeeecCC-----CCCCHH
Q psy10545 118 ----------GL--------DIPIIMDATVNQKN-------DEYHFIYT-LPLTPNSL-MIEDTRYTKK-----PFLKID 165 (1428)
Q Consensus 118 ----------g~--------~~~~~MD~r~~~~~-------~~~~F~Y~-lP~~~~~~-liE~T~~~~~-----~~~~~~ 165 (1428)
|+ ...+..|+..+... ....++++ +|+++++. -|=.+.+... ..++.+
T Consensus 204 G~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 283 (570)
T 3fmw_A 204 GGRSTVRRLAADRFPGTEATVRALIGYVTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLE 283 (570)
T ss_dssp CSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCCCHH
T ss_pred CCCchHHHHcCCCCccceeeeEEEEEEEEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHH
Confidence 11 22445555443210 11124444 69988865 2333333222 123555
Q ss_pred HHHHHHHHHHHHcCCcceeEEE-EEEEeecCCCCcchhhcccCceecccccccccCCCCCcHHHHHHHHHHHHHHhh
Q psy10545 166 MLKKSIKDYAIKNRWKLKNIER-EEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSI 241 (1428)
Q Consensus 166 ~~~~~l~~~l~~~g~~~~~i~~-~E~g~iPm~~~~~~~~~~~~~~~~G~~~g~~~pstGYs~~~~~~~a~~~a~~~~ 241 (1428)
++.+.+++.+ +........ .....+|+.......-...+++-+|=|+..++|.+|..+..+.+.|..++..|.
T Consensus 284 ~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La 357 (570)
T 3fmw_A 284 DLGAAVARVR---GTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLA 357 (570)
T ss_dssp HHHHHTTSSS---SCCCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---hcccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHH
Confidence 5555554432 322221111 246678886652110024679999999999999999999988888888888774
No 142
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.26 E-value=1.5e-06 Score=100.55 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=40.4
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCCeEEEEEec--CCc--EEEcCEEEEcCCH
Q psy10545 939 KLFQNLGGNLILNSQVISIYVNNNKVNKVHLK--NGQ--IFDADIIVSNADI 986 (1428)
Q Consensus 939 ~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~--~G~--~i~ad~VV~A~~~ 986 (1428)
+.+++.|++|+++++|++|..+++++.+|++. +|+ ++.+|.||++++.
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 33467899999999999999888887778776 785 7899999999964
No 143
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.26 E-value=3e-06 Score=105.07 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHH-cCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQN-LGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~-~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+...|.+.+++ .|++| ++++|++|..+++++++|.+.+|.++.||.||+|+|..
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 4567788888887 69999 67899999998888889999999899999999999875
No 144
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.23 E-value=8.3e-07 Score=101.70 Aligned_cols=60 Identities=13% Similarity=0.111 Sum_probs=45.5
Q ss_pred ceeeecCchHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 922 g~~~~~gG~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
....+..+...+.+.+.+.+++.|++|+. ++|++|..++ .|++.+|+++.+|.||++++.
T Consensus 165 ~v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~----~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 165 ETTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAGHA----DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEETTE----EEEETTSCEEEESEEEECCEE
T ss_pred cEEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeecCC----eEEeCCCCEEEEEEEEEccCc
Confidence 34444444445666778888999999995 8999986332 688899999999999999853
No 145
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.23 E-value=1.4e-05 Score=98.87 Aligned_cols=195 Identities=12% Similarity=0.061 Sum_probs=111.1
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeCC----eEEE---cCCc--EEEeeEEEecCCCCCCC-----CCc---
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITPT----SIRI---NNKK--IINANCIIDGRGLKNSQ-----FDG--- 501 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~----~v~l---~~g~--~~~a~lvI~AdG~~S~~-----~~~--- 501 (1428)
..++...+...|.+.+.+.| .++.+++|+++..+ .|++ .+|+ +++|+.||.|+|..|.. ...
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~ 223 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSP 223 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCS
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcc
Confidence 34789999999999998888 68888999988642 2555 2565 79999999999997541 111
Q ss_pred -ceEEEEEEEEEecCCcCCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEecc-----CCCCCHHHHHHHHHHHH
Q psy10545 502 -IYQIFLGQQWNLSSPHGLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTK-----KPFLKIDMLKKSIKDYA 575 (1428)
Q Consensus 502 -~~q~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~-----~~~~~~~~~~~~l~~~~ 575 (1428)
..+..-|..+.++.+.......++. . . ++ ..+|++|..++...++.+.... ....+.+.. +.+.+.+
T Consensus 224 ~~i~p~rG~~~~~~~~~~~~~~~~~~-~---~-dg-~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~~l~~~~ 296 (501)
T 2qcu_A 224 YGIRLIKGSHIVVPRVHTQKQAYILQ-N---E-DK-RIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEI-NYLLNVY 296 (501)
T ss_dssp SCBCCEEEEEEEEECSSSCSCEEEEE-C---T-TS-CEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHH-HHHHHHH
T ss_pred cccccceeEEEEECCCCCCceEEEee-c---C-CC-CEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHH-HHHHHHH
Confidence 1112223333333332222233322 1 1 22 3578899887777777654321 112233332 2333333
Q ss_pred HH-cC--CccceeeeeeeeeecccCCchh---hhhccCccc--ccccccccccCCCCChHHHHHHHHHHHhhcc
Q psy10545 576 IK-NR--WKLKNIEREEIGSIPIALKNEK---IIKFKKTIC--VGLRANLLHATTGYSLPIAIQLAENIAKYSI 641 (1428)
Q Consensus 576 ~~-~~--~~~~~~~~~~~~~~Pl~~~~~~---~~~~~rv~l--vGdAA~~vhP~~G~G~~~a~~la~~l~~~~~ 641 (1428)
.+ ++ +...+++..-.|..|+...... ....+.++. .++..+.+..++|.|+-.+..+|+.+++.+.
T Consensus 297 ~~~~p~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~ 370 (501)
T 2qcu_A 297 NTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLT 370 (501)
T ss_dssp HHHBSSCCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHG
T ss_pred HHhcCCCCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHH
Confidence 32 33 3333444444577787653211 111234554 4666677778899898776666666665544
No 146
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.22 E-value=2.6e-06 Score=105.06 Aligned_cols=59 Identities=15% Similarity=0.141 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEe--CCeEEEEEe--c-CC--cEEEcCEEEEcCCHHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVN--NNKVNKVHL--K-NG--QIFDADIIVSNADIINT 989 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~--~~~v~~V~~--~-~G--~~i~ad~VV~A~~~~~~ 989 (1428)
..+.+.|.+.+++.|++|+++++|++|..+ ++..+.|++ . +| +++.||.||.|+|....
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 456677788888889999999999999874 233466766 4 66 57999999999987643
No 147
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.21 E-value=9.7e-06 Score=102.00 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcC-cEEEeCceeeEEEEeCCeEEEEEe---cCCc--EEEcCEEEEcCCHHHH
Q psy10545 931 GALIKALIKLFQNLG-GNLILNSQVISIYVNNNKVNKVHL---KNGQ--IFDADIIVSNADIINT 989 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G-~~V~~~~~V~~I~~~~~~v~~V~~---~~G~--~i~ad~VV~A~~~~~~ 989 (1428)
..+...|.+.+.+.| ++|+++++|++|..+++++++|.. .+|+ ++.|+.||+|++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 578889999998889 999999999999999998888754 5676 6899999999987643
No 148
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.21 E-value=2.9e-06 Score=104.55 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++.+.|++.+|+++.+|.||+|++..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 467888899999999999999999999887654467888899899999999999753
No 149
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.21 E-value=4.4e-06 Score=103.32 Aligned_cols=56 Identities=14% Similarity=0.174 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++ +.|++.+|+++.+|.||+|++..
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAG-VLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-EEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-EEEEECCCcEEEcCEEEECCCCC
Confidence 467788889999999999999999999887766 46777888899999999999764
No 150
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.21 E-value=6.7e-06 Score=100.50 Aligned_cols=57 Identities=16% Similarity=0.264 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
...+.+.+.+.+++.|++|+++++|++|..++++ +.|++.+|+++.+|.||+|++..
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG-ARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEECCCeEEEcCEEEECcCCC
Confidence 4577888889999999999999999999988776 56777788899999999999754
No 151
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.20 E-value=4.3e-06 Score=105.80 Aligned_cols=55 Identities=16% Similarity=0.247 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
...+.+.+.+.+++.|++|+++++|++|..+++ +|++.+|+++.+|.||+|++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCCCEEEcCEEEEccCCC
Confidence 356788889999999999999999999976544 3778899999999999999753
No 152
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.20 E-value=8.6e-06 Score=99.63 Aligned_cols=58 Identities=24% Similarity=0.260 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec-CCcEEEcCEEEEcCCHHHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK-NGQIFDADIIVSNADIINT 989 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~-~G~~i~ad~VV~A~~~~~~ 989 (1428)
..+.+.|.+.+++.|++|+++++| +|..+++++.+|.+. ++.++.||.||+|++....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 567888888888889999999999 999999988887763 2235789999999987653
No 153
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.19 E-value=1e-05 Score=102.90 Aligned_cols=57 Identities=12% Similarity=0.162 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHc-Cc-EEEeCceeeEEEEeCC---eEEEEEe---cCCc--EEEcCEEEEcCCHHH
Q psy10545 932 ALIKALIKLFQNL-GG-NLILNSQVISIYVNNN---KVNKVHL---KNGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 932 ~l~~~L~~~l~~~-G~-~V~~~~~V~~I~~~~~---~v~~V~~---~~G~--~i~ad~VV~A~~~~~ 988 (1428)
.+...|.+.+++. |+ +|++++.|++|..+++ ++++|.. .+|+ .+.|+.||+|++...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4667777778777 99 9999999999998877 8888864 4665 689999999998764
No 154
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.19 E-value=4.6e-06 Score=101.84 Aligned_cols=55 Identities=9% Similarity=0.096 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
...+.+.+.+.+++.|++|+++++|++|..+++++ .|.+++| ++.||.||+|++.
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEESSC-EEEESEEEECSCC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEECCC-EEEeCEEEECcCC
Confidence 46778889999999999999999999999877775 7888777 8999999999964
No 155
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.18 E-value=8e-06 Score=99.51 Aligned_cols=56 Identities=14% Similarity=0.198 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++.+.|++.+|+++.+|.||+|++.
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 45778888899999999999999999987654435788889989999999999964
No 156
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.17 E-value=4.7e-06 Score=98.81 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..+++. +.|.+.+| ++.+|+||+|++..
T Consensus 88 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 88 ETYAEYLQVVANHYELNIFENTVVTNISADDAY-YTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-EEEEeCCC-EEEeCEEEECCCCC
Confidence 345566777778889999999999999987665 56777777 69999999999865
No 157
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.17 E-value=8.2e-06 Score=100.32 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCe-EEEEEecCC-cEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNK-VNKVHLKNG-QIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~-v~~V~~~~G-~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++ ++.|++.+| +++.+|.||+|++.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 467788888899999999999999999875433 467888899 78999999999974
No 158
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.16 E-value=5.2e-06 Score=95.86 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=39.8
Q ss_pred HHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 936 ALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 936 ~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
.+.+.+++.|+++++ ++|++|..+++. +.|.+.+|+++.+|.||+|++..
T Consensus 64 ~l~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEM-TAVQRVSKKDSH-FVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHTTSCEEEC-SCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEEcCCE-EEEEEcCCCEEECCEEEECCCCC
Confidence 344455667899988 789999988875 56777888899999999999853
No 159
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.15 E-value=7.1e-06 Score=86.33 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHHH
Q psy10545 933 LIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADIIN 988 (1428)
Q Consensus 933 l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~~ 988 (1428)
+.+.+.+.+++.|++++++ +|++|..+++. +.|++++| ++.+|.||+|++...
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEEECCC-EEEECEEEECCCCCC
Confidence 4455666778889999999 99999987665 67888888 899999999998653
No 160
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.14 E-value=8.8e-06 Score=98.53 Aligned_cols=57 Identities=19% Similarity=0.316 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEE--eCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYV--NNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~--~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|.. +++++..|++.+|+++.+|.||++++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 56778888899999999999999999987 5677778999999999999999999743
No 161
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.14 E-value=2.5e-05 Score=97.74 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHc-CcEEEeCceeeEEEEeC-CeEEEEEecCCcEEEcCEEEEcCCHHHH
Q psy10545 931 GALIKALIKLFQNL-GGNLILNSQVISIYVNN-NKVNKVHLKNGQIFDADIIVSNADIINT 989 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~-G~~V~~~~~V~~I~~~~-~~v~~V~~~~G~~i~ad~VV~A~~~~~~ 989 (1428)
..+.+.|.+.+++. |++|+++ +|++|..++ +.+++|++.+|+++.||.||.|.|....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 56788899999998 9999999 999998754 5567899999988999999999987653
No 162
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.14 E-value=3.9e-06 Score=103.49 Aligned_cols=57 Identities=16% Similarity=0.318 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++.+.|++.+|+++.+|.||+|++..
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 467788889999999999999999999877644467888899899999999999753
No 163
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.14 E-value=7.3e-06 Score=101.69 Aligned_cols=56 Identities=14% Similarity=0.264 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHc-CcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNL-GGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~-G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+...|.+.+++. |++|+ +..|+.|..+++++.+|.+.+|+++.||.||+|+|.+
T Consensus 117 ~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 117 TQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 35677788888874 89995 5699999999999888999999999999999999865
No 164
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.13 E-value=3.7e-06 Score=102.50 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=38.7
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCC--eEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGI--STIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~--~V~VlEa~~~~GGr~~ 751 (1428)
..+||+|||||++||+||..|++.|. +|+|+|+++.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 46899999999999999999999999 9999999999998653
No 165
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.13 E-value=9e-06 Score=96.97 Aligned_cols=57 Identities=23% Similarity=0.316 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
...+.+.+.+.+++.|++|+++++|++|..++++ +.|++.+|+++.+|.||+|++..
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE-EEEEECCCCEEECCEEEECcCCC
Confidence 3567888999999999999999999999987775 67888899999999999999753
No 166
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.12 E-value=6e-05 Score=90.41 Aligned_cols=185 Identities=10% Similarity=-0.034 Sum_probs=102.0
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeCC--e---EEEcCCcEEEeeEEEecCCCCCCC------CCcceEEEE
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S---IRINNKKIINANCIIDGRGLKNSQ------FDGIYQIFL 507 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~---v~l~~g~~~~a~lvI~AdG~~S~~------~~~~~q~~~ 507 (1428)
..++...+.+.|.+.+.+.| .++.+++|+++..+ . |++.+| +++|+.||.|+|..|.. .........
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~ 247 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHP 247 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCccccc
Confidence 45667788999999998888 68888999998632 2 566666 79999999999998631 111111111
Q ss_pred EEEEEecCCcC-CCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEecc--CCCCCHHHHHHHHHHHHHH-cC-Ccc
Q psy10545 508 GQQWNLSSPHG-LDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTK--KPFLKIDMLKKSIKDYAIK-NR-WKL 582 (1428)
Q Consensus 508 g~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~-~~~ 582 (1428)
+.-+.++ |.. .....+++.. ..+|+.|..++...++.+.... .......+..+.+.+.+.+ ++ +..
T Consensus 248 ~~~~~~~-~~~~~~~~~~~~~~--------~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~ 318 (405)
T 2gag_B 248 LQALVSE-LFEPVHPTVVMSNH--------IHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIFAR 318 (405)
T ss_dssp EEEEEEE-EBCSCCCSEEEETT--------TTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGGGG
T ss_pred eeEEEec-CCccccCceEEeCC--------CcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCcccc
Confidence 2111111 211 1122333211 1256788777777777654211 1111112222333333332 22 111
Q ss_pred ceeeeeeeeeecccCCchhhhhccCcccccccc--ccccc--CCCCChHHHHHHHHHHHhhccc
Q psy10545 583 KNIEREEIGSIPIALKNEKIIKFKKTICVGLRA--NLLHA--TTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 583 ~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA--~~vhP--~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
.++...-.+..|+. .++..+||+.. +.+.. .+|.||..+..+++.+++.+..
T Consensus 319 ~~~~~~w~g~~~~t--------~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 319 AHVLRTWGGIVDTT--------MDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp CEECEEEEEEEEEE--------TTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred CCcceEEeeccccC--------CCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 23333334566652 25677888864 33333 3457888888888888877664
No 167
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.11 E-value=6e-06 Score=103.25 Aligned_cols=61 Identities=20% Similarity=0.223 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecC---C--cEEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 932 ALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKN---G--QIFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 932 ~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~---G--~~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
.+.+.|.+.+++. |+++++|++|..+++++ .|++.+ | +++.||+||.|.+.....++.++.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v-~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 204 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHV-RATITDLRTGATRAVHARYLVACDGASSPTRKALGI 204 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCE-EEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTC
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEE-EEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCC
Confidence 4556677777665 99999999999888774 455544 6 479999999999998888777753
No 168
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.11 E-value=7e-06 Score=98.86 Aligned_cols=51 Identities=22% Similarity=0.273 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++++++++|++|.. + +|++++|+++.+|.||++++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~---~v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H---EIVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S---EEEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C---eEEECCCCEEeeeEEEECCCC
Confidence 56788899999999999999999999953 2 277889999999999999864
No 169
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.11 E-value=8.4e-06 Score=101.25 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEe-CCeEEEEEecCCcEEEcCEEEEcCCHHHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVN-NNKVNKVHLKNGQIFDADIIVSNADIINT 989 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~-~~~v~~V~~~~G~~i~ad~VV~A~~~~~~ 989 (1428)
...+.+.|.+.+++.|++++.+ +|++|..+ ++.+++|++.+|+++.||.||.|.|....
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3567888999898999999999 99999885 45567899999988999999999988654
No 170
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.10 E-value=1.5e-05 Score=97.55 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCc-EEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQ-IFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~-~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++ ..|++.+|+ ++.+|.||+|++..
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCC
Confidence 456778888899999999999999999987766 678888998 89999999999653
No 171
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.09 E-value=7.3e-06 Score=95.30 Aligned_cols=40 Identities=38% Similarity=0.546 Sum_probs=36.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++||+||..|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4689999999999999999999999999999998 677754
No 172
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.09 E-value=7.3e-06 Score=104.29 Aligned_cols=66 Identities=15% Similarity=0.233 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHcCc--EEEeCceeeEEEEeCC---eEEEEEec------CC--cEEEcCEEEEcCCHHHHHHHhcCC
Q psy10545 931 GALIKALIKLFQNLGG--NLILNSQVISIYVNNN---KVNKVHLK------NG--QIFDADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~--~V~~~~~V~~I~~~~~---~v~~V~~~------~G--~~i~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
..+.+.|.+.+++.|+ +|+++++|++|..+++ ..+.|++. +| +++.||.||.|.|....+++.++.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 4566788888888887 9999999999998752 22455554 46 578999999999999888877764
No 173
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.08 E-value=8.1e-05 Score=95.57 Aligned_cols=59 Identities=7% Similarity=0.142 Sum_probs=49.1
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce--EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS--IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~--v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
+..++...+.+.|.+.+++.| .++.+++|+++.. +. |++.+|.+++|+.||.|+|..|.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 456788899999999998888 7888999999863 23 56667788999999999999865
No 174
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.06 E-value=1.1e-06 Score=102.19 Aligned_cols=42 Identities=26% Similarity=0.424 Sum_probs=38.4
Q ss_pred ccceeeecCCCcchHHHHHHHHh--CCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQT--AGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~--~G~~V~VlEa~~~~GGr~~ 751 (1428)
..+||+|||||++||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 46899999999999999999975 5999999999999999775
No 175
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.04 E-value=7.3e-06 Score=98.58 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|++++.|++|..++ ++.+|++.+|+++.||.||++++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 4567888888999999999999999998654 5578999999999999999999753
No 176
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.03 E-value=7.9e-06 Score=103.33 Aligned_cols=58 Identities=12% Similarity=0.181 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHc--CcEEEeCceeeEEEEeCC---eEEEEEe---cCCc--EEEcCEEEEcCCHHH
Q psy10545 931 GALIKALIKLFQNL--GGNLILNSQVISIYVNNN---KVNKVHL---KNGQ--IFDADIIVSNADIIN 988 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~--G~~V~~~~~V~~I~~~~~---~v~~V~~---~~G~--~i~ad~VV~A~~~~~ 988 (1428)
..+...|.+.+++. |++|+.++.|++|..+++ ++.+|.. .+|+ .+.|+.||+|++...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 35677788888887 999999999999999877 8888865 3554 589999999998653
No 177
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.03 E-value=2.5e-05 Score=97.13 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHH-cCcEEEeCceeeEEEEeC-CeEEEEEecCCcEEEcCEEEEcCCHHHHH
Q psy10545 931 GALIKALIKLFQN-LGGNLILNSQVISIYVNN-NKVNKVHLKNGQIFDADIIVSNADIINTY 990 (1428)
Q Consensus 931 ~~l~~~L~~~l~~-~G~~V~~~~~V~~I~~~~-~~v~~V~~~~G~~i~ad~VV~A~~~~~~~ 990 (1428)
..+.+.|.+.+++ .|++++.+ .|++|..++ +.++.|++.+|+++.||.||.|.|.....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 5677888888888 89999999 599998864 44568888888789999999999886543
No 178
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.02 E-value=1e-05 Score=99.79 Aligned_cols=41 Identities=27% Similarity=0.403 Sum_probs=38.3
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++||+||..|++. ++|+|+|+++.+||...
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 468999999999999999999999 99999999999999765
No 179
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.98 E-value=0.00018 Score=92.52 Aligned_cols=59 Identities=10% Similarity=0.115 Sum_probs=47.7
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEEEEeCCe----EEEcCCc-EEEeeEEEecCCCCCC
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVEIITPTS----IRINNKK-IINANCIIDGRGLKNS 497 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~~----v~l~~g~-~~~a~lvI~AdG~~S~ 497 (1428)
...++...+.+.|.+.+.+.| .++.+++|+++..++ |++.+|. +++|+.||.|+|..|.
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 445678899999999998888 788899999987432 5666776 8999999999999866
No 180
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.98 E-value=2.2e-06 Score=104.78 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
...+.+.+.+.+++.|++|+++++|++|..+++++..|.+ +|+++.+|.||+|++..
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 3567888899999999999999999999977777666766 78899999999999754
No 181
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.98 E-value=1.1e-05 Score=92.90 Aligned_cols=52 Identities=12% Similarity=0.164 Sum_probs=40.7
Q ss_pred HHHHHHHHcCcEEEeCceeeEEEEeC--CeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 936 ALIKLFQNLGGNLILNSQVISIYVNN--NKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 936 ~L~~~l~~~G~~V~~~~~V~~I~~~~--~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
.+.+.+++.|++++++++|+.|..++ ++.+.|.+++|+++.+|.||+|++..
T Consensus 61 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 34445566789999999999997653 22367888889899999999999864
No 182
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.96 E-value=0.00011 Score=87.39 Aligned_cols=185 Identities=15% Similarity=0.138 Sum_probs=102.7
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce--EEEcCCcEEEeeEEEecCCCCCCC------CC-cceEEE
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS--IRINNKKIINANCIIDGRGLKNSQ------FD-GIYQIF 506 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~--v~l~~g~~~~a~lvI~AdG~~S~~------~~-~~~q~~ 506 (1428)
...++...+.+.|.+.+++.| .++.+++|+++.. +. |++.+| +++|+.||.|+|..|.. .. ......
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~p~ 226 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPK 226 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCCCCCCEEE
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCCCCceeee
Confidence 456788999999999998888 6788899988863 22 555555 89999999999997641 11 112222
Q ss_pred EEEEEEecCCcCC---CCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEecc---CC-CCCHHHHHHHHHHHHHH-c
Q psy10545 507 LGQQWNLSSPHGL---DIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTK---KP-FLKIDMLKKSIKDYAIK-N 578 (1428)
Q Consensus 507 ~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~---~~-~~~~~~~~~~l~~~~~~-~ 578 (1428)
-|.-+.++.+... ..+.+++.. + .+|+.|.. +.+.++.+.... .. ..+...+.. +.+.+.. .
T Consensus 227 rg~~~~~~~~~~~~~~~~p~~~~~~------~--~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 296 (381)
T 3nyc_A 227 RRSAFIFAPPPGIDCHDWPMLVSLD------E--SFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIAT-GMYLIEEAT 296 (381)
T ss_dssp EEEEEEECCCTTCCCTTCCEEEETT------S--SCEEEEET-TEEEEECCCCEECCSSCCCCCHHHHHH-HHHHHHHHB
T ss_pred EEEEEEECCCcCCCcCccceEEeCC------C--CEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHHHH-HHHHHHhcC
Confidence 2333333333211 122333221 1 14678876 666675443221 11 112223333 2233332 2
Q ss_pred CCccceeeeeeeeeecccCCchhhhhccCcccccccc---cccc--cCCCCChHHHHHHHHHHHhhccc
Q psy10545 579 RWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRA---NLLH--ATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 579 ~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA---~~vh--P~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
.+...++...-.+..|+.. ++.-+||... +.++ -..|.||..+...++.+++.+..
T Consensus 297 ~l~~~~~~~~w~G~r~~t~--------D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g 357 (381)
T 3nyc_A 297 TLTIRRPEHTWAGLRSFVA--------DGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRH 357 (381)
T ss_dssp SCCCCCCSEEEEEEEEECT--------TSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHTT
T ss_pred CCcccceeeeeEEccccCC--------CCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHhC
Confidence 2222233333356666532 3555666542 2222 23467898888888888887764
No 183
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.96 E-value=1.5e-05 Score=100.38 Aligned_cols=55 Identities=13% Similarity=0.306 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEe-------------------CCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVN-------------------NNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~-------------------~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|+++++++.|++|..+ +++ +.+++.+|+++.||.||+|++.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCC
Confidence 567788888899999999999999999873 454 5577788999999999999975
No 184
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.96 E-value=9.7e-06 Score=99.38 Aligned_cols=39 Identities=28% Similarity=0.261 Sum_probs=36.2
Q ss_pred ccceeeecCCCcchHHHHHHHHhCC-----CeEEEEccCCCCCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAG-----ISTIILEQRDKPGG 748 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G-----~~V~VlEa~~~~GG 748 (1428)
.++||+|||||++||+||..|++.| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 4689999999999999999999999 99999999998763
No 185
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.92 E-value=1.6e-05 Score=98.19 Aligned_cols=57 Identities=7% Similarity=-0.136 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 929 GVGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 929 G~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
--..+.+.+.+.+++.|+++++++.|+++...+++ +.|.+.+++++.+|.|++|++-
T Consensus 261 ~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDK-ILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCE
T ss_pred cchhHHHHHHHHHHhhcceeecceEEEEEEecCCe-EEEEEcCCCeEEEEEEEEcccc
Confidence 34678889999999999999999999999998887 6688888889999999999964
No 186
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.90 E-value=7e-05 Score=93.10 Aligned_cols=64 Identities=13% Similarity=-0.014 Sum_probs=48.7
Q ss_pred HHHcCcEEEeCceeeEEEEe----CCeEEEEEec--CCc--EEEcC-EEEEcCCHHHHHHHhcCCCCCChhHH
Q psy10545 941 FQNLGGNLILNSQVISIYVN----NNKVNKVHLK--NGQ--IFDAD-IIVSNADIINTYRNLLGQYAFGKKKY 1004 (1428)
Q Consensus 941 l~~~G~~V~~~~~V~~I~~~----~~~v~~V~~~--~G~--~i~ad-~VV~A~~~~~~~~~Ll~~~~~p~~~~ 1004 (1428)
+...+.+|++++.|++|..+ ++++++|++. +|+ ++.|+ .||++++...+...|+-....|+..+
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L 309 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSIL 309 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHH
Confidence 44568999999999999998 7889999875 564 46776 69999998887776654444455443
No 187
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.87 E-value=6.3e-06 Score=99.90 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=35.1
Q ss_pred cceeeecCCCcchHHHHHHHHh--CCCeEEEEccCCCCCCc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQT--AGISTIILEQRDKPGGR 749 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~--~G~~V~VlEa~~~~GGr 749 (1428)
++||+|||||++||+||..|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3699999999999999999999 89999999999876553
No 188
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.87 E-value=0.0003 Score=83.57 Aligned_cols=186 Identities=12% Similarity=0.039 Sum_probs=101.8
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeCC--e---EEEcCCcEEEeeEEEecCCCCCCC------CC--cceEE
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S---IRINNKKIINANCIIDGRGLKNSQ------FD--GIYQI 505 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~---v~l~~g~~~~a~lvI~AdG~~S~~------~~--~~~q~ 505 (1428)
..++...+.+.|.+.+.+.| .++.+++|+++..+ . |++.+| +++|+.||.|+|..|.. .. .....
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~ 222 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEP 222 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEE
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCe
Confidence 45788899999999998888 68888999998632 2 555555 89999999999998641 11 11122
Q ss_pred EEEEEEEecCCcCCCC-ceEEecccCCCCCcceEEEEeeCCCCceEEEeEEe-c--cCCCCCHHHHHHHHHHHHHH-cC-
Q psy10545 506 FLGQQWNLSSPHGLDI-PIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRY-T--KKPFLKIDMLKKSIKDYAIK-NR- 579 (1428)
Q Consensus 506 ~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~-~--~~~~~~~~~~~~~l~~~~~~-~~- 579 (1428)
.-+.-+.++.+..... ..+++.. . ..+|+.|..++ +.++.+.. . ........+..+.+.+.+.+ ++
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~~~~~-----~--~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~ 294 (382)
T 1y56_B 223 YKHQAVITQPIKRGTINPMVISFK-----Y--GHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPA 294 (382)
T ss_dssp EEEEEEEECCCSTTSSCSEEEEST-----T--TTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCGG
T ss_pred eEeEEEEEccCCcccCCCeEEecC-----C--CeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 2222222332211111 3333321 0 12567888777 66663111 1 11111112223333333332 22
Q ss_pred CccceeeeeeeeeecccCCchhhhhccCcccccccc---ccc--ccCCCCChHHHHHHHHHHHhhccc
Q psy10545 580 WKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRA---NLL--HATTGYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 580 ~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA---~~v--hP~~G~G~~~a~~la~~l~~~~~~ 642 (1428)
+...++...-.+..|+.. ++.-+||... +.+ --.+|.||..+..+++.+++.+..
T Consensus 295 l~~~~~~~~~~g~r~~t~--------d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 295 LKNLLILRTWAGYYAKTP--------DSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp GGGSEEEEEEEEEEEECT--------TSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEeccccCC--------CCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 222234444456666542 3455566543 222 335678899888888888877664
No 189
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.86 E-value=6e-06 Score=95.38 Aligned_cols=40 Identities=30% Similarity=0.495 Sum_probs=36.1
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.+|||+|||||++||+||.+|++.|++|+|+|++ .+||.+
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~ 44 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQM 44 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCee
Confidence 3699999999999999999999999999999985 677765
No 190
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.85 E-value=0.0002 Score=85.21 Aligned_cols=188 Identities=14% Similarity=0.123 Sum_probs=103.2
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeCC--e--EEEcCCcEEEeeEEEecCCCCCCCC-C-----cceEEEEE
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S--IRINNKKIINANCIIDGRGLKNSQF-D-----GIYQIFLG 508 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~--v~l~~g~~~~a~lvI~AdG~~S~~~-~-----~~~q~~~g 508 (1428)
..++...+.+.|.+.+.+.| .++.+++|+++..+ . |++.+ .+++|+.||.|+|..|..+ . ......-+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~-g~~~a~~vV~A~G~~~~~l~~~~g~~~pl~~~rg 223 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETAN-GSYTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQ 223 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETT-EEEEEEEEEECCGGGHHHHGGGGTEECCCEEEEE
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCC-CEEEeCEEEEecCccHHHHhhhhccCCceEEEEE
Confidence 45777899999999998888 68888999998643 2 45544 4799999999999875421 1 11122223
Q ss_pred EEEEecCCc-----CCCCceEEecccCCCCCcceEEEEeeCCCC-ceEEEeEEe----ccC---CCC--CHHHHHHHHHH
Q psy10545 509 QQWNLSSPH-----GLDIPIIMDATVNQKNDEYHFIYTLPLTPN-SLMIEDTRY----TKK---PFL--KIDMLKKSIKD 573 (1428)
Q Consensus 509 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~-~~~v~~~~~----~~~---~~~--~~~~~~~~l~~ 573 (1428)
.-+.++.+. ....+.++... . ...+|+.|..++ .+.++.+.. ... ... +.+.. +.+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~p~~~~~~---~---~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 296 (389)
T 2gf3_A 224 VVGFFESDESKYSNDIDFPGFMVEV---P---NGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDE-SNLRA 296 (389)
T ss_dssp EEEEECCCHHHHBGGGTCCEEEEEE---T---TEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHH-HHHHH
T ss_pred EEEEEecCcccccccccCCEEEEeC---C---CCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHH-HHHHH
Confidence 222233221 00122222211 0 125788898776 777764321 111 111 22222 34444
Q ss_pred HHHH-cCCccceeeeeeeeeecccCCchhhhhccCcccccccc---ccccc--CCCCChHHHHHHHHHHHhhcccC
Q psy10545 574 YAIK-NRWKLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRA---NLLHA--TTGYSLPIAIQLAENIAKYSITT 643 (1428)
Q Consensus 574 ~~~~-~~~~~~~~~~~~~~~~Pl~~~~~~~~~~~rv~lvGdAA---~~vhP--~~G~G~~~a~~la~~l~~~~~~~ 643 (1428)
.+.+ ++.-..++...-.+..|+.. ++..+||... +.+.. .+|.||..+..+++.+++.+..+
T Consensus 297 ~~~~~~P~l~~~~~~~w~g~r~~t~--------D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 364 (389)
T 2gf3_A 297 FLEEYMPGANGELKRGAVCMYTKTL--------DEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTG 364 (389)
T ss_dssp HHHHHCGGGCSCEEEEEEEEEEECT--------TSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCCCCCceEEEEEEeccCC--------CCCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHHHcCC
Confidence 4433 22111134433345666432 4556677642 33333 34678998888888888876643
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.81 E-value=5e-05 Score=94.11 Aligned_cols=52 Identities=12% Similarity=0.168 Sum_probs=41.0
Q ss_pred HHHHHHHHcCcEEEeCceeeEEEEeC--CeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 936 ALIKLFQNLGGNLILNSQVISIYVNN--NKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 936 ~L~~~l~~~G~~V~~~~~V~~I~~~~--~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
.+.+.+++.|++++.+++|++|..+. +..+.|++++|+++.+|+||+|+|..
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 44455667799999999999997642 22367888899899999999999864
No 192
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.80 E-value=2.5e-05 Score=92.76 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=36.8
Q ss_pred HHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 941 FQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 941 l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
+++.|++++++++|++|+.++.. |++++|+++.+|++|+|++.
T Consensus 72 ~~~~~i~~~~~~~V~~id~~~~~---v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPNNKL---VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HHHTTCEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCE
T ss_pred HHHCCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEecCC
Confidence 34568999999999999877664 77889999999999999985
No 193
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.78 E-value=0.00098 Score=79.55 Aligned_cols=58 Identities=14% Similarity=0.076 Sum_probs=45.5
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce--EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS--IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~--v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
...++...+.+.|.+.+.+.| .++.+++|+++.. +. |+.. +.+++|+.||.|+|..|.
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~-~g~i~a~~VV~A~G~~s~ 209 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTD-RGTYRAGKVVLACGPYTN 209 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEES-SCEEEEEEEEECCGGGHH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEEC-CCEEEcCEEEEcCCcChH
Confidence 346788889999999998888 6888999999864 23 3443 458999999999998754
No 194
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.75 E-value=5.1e-05 Score=96.65 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=33.9
Q ss_pred ccceeeecCCCcchHHHHHHHHh-----CCCeEEEEccCCCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQT-----AGISTIILEQRDKP 746 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~-----~G~~V~VlEa~~~~ 746 (1428)
.++||+|||||++||++|..|++ .|++|+|+|+.+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 46899999999999999999999 99999999997643
No 195
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.73 E-value=0.00022 Score=87.98 Aligned_cols=61 Identities=16% Similarity=0.120 Sum_probs=46.6
Q ss_pred HHHHHHHHHHcC-cEEEeCceeeEEEEeC-C-eEEEEEec--CC-----cEEEcCEEEEcCCHHHHHHHhc
Q psy10545 934 IKALIKLFQNLG-GNLILNSQVISIYVNN-N-KVNKVHLK--NG-----QIFDADIIVSNADIINTYRNLL 994 (1428)
Q Consensus 934 ~~~L~~~l~~~G-~~V~~~~~V~~I~~~~-~-~v~~V~~~--~G-----~~i~ad~VV~A~~~~~~~~~Ll 994 (1428)
..++.+.+.++| ++|++++.|++|..++ + ++++|++. +| .++.|+.||+|++...+.+.|+
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 334445555665 9999999999999985 3 78999874 56 3688999999999887665444
No 196
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.73 E-value=1.8e-05 Score=98.80 Aligned_cols=59 Identities=17% Similarity=0.089 Sum_probs=46.9
Q ss_pred cCcEEEeCceeeEEEEeCCeEEEEEecCC---cEEEcCEEEEcCCHHHHHHHhcCCCCCChh
Q psy10545 944 LGGNLILNSQVISIYVNNNKVNKVHLKNG---QIFDADIIVSNADIINTYRNLLGQYAFGKK 1002 (1428)
Q Consensus 944 ~G~~V~~~~~V~~I~~~~~~v~~V~~~~G---~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~ 1002 (1428)
.+.+|.+++.|++|..+++++++|...+. .++.|+.||++++...+.+.|+.....+..
T Consensus 224 ~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGig~~~ 285 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGIGPHD 285 (526)
T ss_dssp TTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTEECHH
T ss_pred CCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccCCchh
Confidence 46899999999999999999999876432 357899999999999888877655444443
No 197
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.70 E-value=3.9e-06 Score=102.22 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=44.7
Q ss_pred chHHHHHHHHHhccCC-eEEecceEEEEeC--Ce---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 444 SKHLNSYLIRALGINN-FLFNNKTVEIITP--TS---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 444 r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
...+.+.|.+++.+.| .++.+++|+++.. +. |++.+|.+++|+.||.|+|..|.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~ 192 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSV 192 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcC
Confidence 5788899999998888 6888999998862 32 67778877999999999999963
No 198
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.69 E-value=1.6e-05 Score=91.79 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=32.9
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDK 745 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~ 745 (1428)
+|||+|||||+|||+||.+|++.|++|+|+|+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 58999999999999999999999999999999753
No 199
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.69 E-value=2.5e-05 Score=93.62 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=45.6
Q ss_pred eeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce--EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 441 SICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS--IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 441 ~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~--v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
...+..+.+.|.+.+.+.| .++.+++|+++.. +. |++.+| +++||.||.|+|..|.
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccC
Confidence 3567789999999998878 6888999999863 22 566666 8999999999999964
No 200
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.64 E-value=0.0002 Score=88.85 Aligned_cols=67 Identities=16% Similarity=0.047 Sum_probs=48.8
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEe----C-CeEEEEEecC--C---cEEEc-CEEEEcCCHHHHHHHhcCCCCCChhH
Q psy10545 937 LIKLFQNLGGNLILNSQVISIYVN----N-NKVNKVHLKN--G---QIFDA-DIIVSNADIINTYRNLLGQYAFGKKK 1003 (1428)
Q Consensus 937 L~~~l~~~G~~V~~~~~V~~I~~~----~-~~v~~V~~~~--G---~~i~a-d~VV~A~~~~~~~~~Ll~~~~~p~~~ 1003 (1428)
|...+...+.+|++++.|++|..+ + +++++|++.+ | .++.| +.||++++...+.+.|+-....|+..
T Consensus 214 L~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~ 291 (566)
T 3fim_B 214 LRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDEND 291 (566)
T ss_dssp HHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHH
T ss_pred hhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHH
Confidence 333344568999999999999988 4 5788998753 4 35677 67999999988887665544445443
No 201
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.64 E-value=0.00044 Score=81.77 Aligned_cols=58 Identities=16% Similarity=-0.068 Sum_probs=45.9
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEEEEeCC--e--EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S--IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~--v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
...++...+.+.|.+.+.+.| .++.+++|+++..+ . |++.+| +++|+.||.|+|..|.
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 345778889999999998888 68888999998643 2 555555 5999999999998865
No 202
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.62 E-value=0.00057 Score=85.26 Aligned_cols=190 Identities=16% Similarity=0.175 Sum_probs=98.3
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce---EEEcC---C--cEEEeeEEEecCCCCCCC----CC----
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS---IRINN---K--KIINANCIIDGRGLKNSQ----FD---- 500 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~---v~l~~---g--~~~~a~lvI~AdG~~S~~----~~---- 500 (1428)
+.++...+...|.+.+.+.| .++.+++|+++.. +. |++.| | .+++|+.||.|+|..|.. ..
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~ 244 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHG 244 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCS
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCC
Confidence 46788999999999998888 7888899998863 22 55543 3 479999999999997631 11
Q ss_pred cceEEEEEEEEEecCCc-CCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEec--c---CCCCCHHHHHH---HH
Q psy10545 501 GIYQIFLGQQWNLSSPH-GLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYT--K---KPFLKIDMLKK---SI 571 (1428)
Q Consensus 501 ~~~q~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~--~---~~~~~~~~~~~---~l 571 (1428)
...+..-|..+.+..+. .....+++... . +| .++|++|. ++...++.|... . ....+.++... .+
T Consensus 245 ~~v~p~kG~~lvl~~~~~~~~~~~~~~~~---~-dg-r~v~~iP~-~g~~~iGtT~~~~~~~~~~~~~t~~~i~~ll~~~ 318 (561)
T 3da1_A 245 KYLKLSKGVHLVVDQSRFPLRQAVYFDTE---S-DG-RMIFAIPR-EGKTYIGTTDTFYDKDIASPRMTVEDRDYILAAA 318 (561)
T ss_dssp SEEEEEEEEEEEEEGGGSCCSSEEEECCS---S-SC-CCEEEEEE-TTEEEECCCCEEECSCTTCCCCCHHHHHHHHHHH
T ss_pred ceEEeccEEEEEECCccCCCceEEEeccC---C-CC-cEEEEEec-CCCEEEcCCCCccCCCcCCCCCCHHHHHHHHHHH
Confidence 12233345554454332 22233333221 1 22 24667898 567777765421 1 12223333333 33
Q ss_pred HHHHHHcCCccceeeeeeeeeecccCCch---hhhhccCcccccccccccccCCCCChHHHHHHHHHHH
Q psy10545 572 KDYAIKNRWKLKNIEREEIGSIPIALKNE---KIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIA 637 (1428)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~Pl~~~~~---~~~~~~rv~lvGdAA~~vhP~~G~G~~~a~~la~~l~ 637 (1428)
.+++....+...+++..-.|+=|+..... .....+..+..+ ..|.++=..|. +-.....|+.++
T Consensus 319 ~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt~r~mAe~~~ 385 (561)
T 3da1_A 319 NYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTGYRKMAERTV 385 (561)
T ss_dssp HHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STTHHHHHHHHH
T ss_pred HHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhhHHHHHHHHH
Confidence 33322122223455555556667743211 111123344443 35555554444 543334444333
No 203
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.60 E-value=1.8e-05 Score=97.58 Aligned_cols=43 Identities=28% Similarity=0.470 Sum_probs=37.9
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
|.++||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 3468999999999999999999999999999999999999653
No 204
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.58 E-value=0.00015 Score=85.55 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=48.0
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEEEEeCC--e---EEEcCC--cEEEeeEEEecCCCCCC
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S---IRINNK--KIINANCIIDGRGLKNS 497 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~---v~l~~g--~~~~a~lvI~AdG~~S~ 497 (1428)
...++...+.+.|.+.+++.| .++.+++|+++..+ . |++.+| .+++|+.||.|+|..|.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHH
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchH
Confidence 345788899999999998888 68889999998642 2 566676 48999999999999864
No 205
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.58 E-value=0.00022 Score=86.26 Aligned_cols=51 Identities=16% Similarity=0.303 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|+++++++.|+++. ++ .|++++|+++.+|.||++++.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~~---~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN--GN---EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE--TT---EEEETTSCEEECSEEEECCCE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec--CC---eeeecCCeEEeeeeEEEEece
Confidence 4567788888999999999999999884 33 377899999999999999964
No 206
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.56 E-value=5.2e-05 Score=93.49 Aligned_cols=56 Identities=7% Similarity=-0.002 Sum_probs=46.4
Q ss_pred eechHHHHHHHHHhccCC-eEEecceEEEEeCC--e---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 442 ICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 442 i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
.....+.+.|.+.+.+.| .++.+++|+++..+ . |++.+|.+++|++||.|+|..|.
T Consensus 217 ~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 217 FKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred chHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 356778888999988877 78899999998632 1 67888889999999999999873
No 207
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.55 E-value=1.9e-05 Score=89.81 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=32.2
Q ss_pred HHHHHhcCCchHHHHHHHHhhc-CCeEEEEcCCCCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTA-GISTIILEQRDKL 346 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~-G~~V~lie~~~~~ 346 (1428)
+|++|+|+|++|+.+|+.|++. |++|+|||+.+.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 4789999999999999999997 9999999998755
No 208
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.54 E-value=4.6e-05 Score=90.04 Aligned_cols=39 Identities=26% Similarity=0.276 Sum_probs=34.9
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGG 748 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GG 748 (1428)
.++||+|||||++|+++|++|+++|++|+|+|++...+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 358999999999999999999999999999999875443
No 209
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.51 E-value=0.00017 Score=89.60 Aligned_cols=142 Identities=13% Similarity=0.062 Sum_probs=85.4
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCccc---CcchhHHHHHHHHHhcCCCceEEEe
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNT---NQGLWNSIIAWYLKQYNPKLNVLLL 387 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~---g~Gl~~~~~~~~~~~~~~~~rv~~l 387 (1428)
++|+||+|+|++|+.+|++||+.|.+|+|||+.+.. + +...| -+|+....+...+.... .
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~--------i--G~~~Cnps~ggia~~~lv~ei~alg-g------ 90 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDT--------L--GQMSCNPAIGGIGKGHLVKEVDALG-G------ 90 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG--------T--TCCSSSSEEESTTHHHHHHHHHHTT-C------
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccc--------c--ccccccccccchhhHHHHHHHHHhc-c------
Confidence 468999999999999999999999999999987421 0 11112 23443322221111000 0
Q ss_pred ecCCCCCCceeeeccCCcCcccccccccccccccCccEEEcC----CCcccccccceeeechHHHHHHHHHhcc-CCeEE
Q psy10545 388 ELSSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFP----KFNRKIFSGYYSICSKHLNSYLIRALGI-NNFLF 462 (1428)
Q Consensus 388 ~~~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~~~~ 462 (1428)
.+..|. + ...+.+. ........+...+++..+.+.|.+.+.+ .|+.+
T Consensus 91 ---------~~~~~~-----------d--------~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I 142 (651)
T 3ces_A 91 ---------LMAKAI-----------D--------QAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI 142 (651)
T ss_dssp ---------SHHHHH-----------H--------HHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE
T ss_pred ---------HHHHHh-----------h--------hcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE
Confidence 000000 0 0011110 0001112234568889999999999987 57433
Q ss_pred ecceEEEEe--CCe---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 463 NNKTVEIIT--PTS---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 463 ~~~~v~~i~--~~~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
.+++|+.+. .+. |.+.+|.+++|+.||.|+|..|.
T Consensus 143 ~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 143 FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 567898885 232 66778888999999999999843
No 210
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.50 E-value=2.6e-05 Score=89.55 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=33.4
Q ss_pred HHHHHHHhcCCchHHHHHHHHhhc--CCeEEEEcCCCCC
Q psy10545 310 FDKIRIFSGAGIGGIALAIRLQTA--GISTIILEQRDKL 346 (1428)
Q Consensus 310 ~~~~~ii~g~~~~~~~~a~~La~~--G~~V~lie~~~~~ 346 (1428)
.++|++|+|+|++|+.+|+.|+++ |++|+|||+.+.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 346899999999999999999997 9999999988755
No 211
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.49 E-value=0.00033 Score=87.13 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=42.2
Q ss_pred HcCcEEEeCceeeEEEEeC-CeEEEEEecC---Cc--EEEcC-EEEEcCCHHHHHHHhc
Q psy10545 943 NLGGNLILNSQVISIYVNN-NKVNKVHLKN---GQ--IFDAD-IIVSNADIINTYRNLL 994 (1428)
Q Consensus 943 ~~G~~V~~~~~V~~I~~~~-~~v~~V~~~~---G~--~i~ad-~VV~A~~~~~~~~~Ll 994 (1428)
+.|++|++++.|++|..++ +++++|++.+ |+ ++.|+ .||+|++...+.+.|+
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~ 279 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLM 279 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhh
Confidence 5689999999999999988 8889998744 53 68898 9999998876655343
No 212
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.48 E-value=3.6e-05 Score=94.24 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=38.3
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 58999999999999999999999999999999999998653
No 213
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.45 E-value=0.00026 Score=86.96 Aligned_cols=56 Identities=11% Similarity=0.079 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCC----cEEEcCEEEEcCCH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNG----QIFDADIIVSNADI 986 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G----~~i~ad~VV~A~~~ 986 (1428)
...+.+.+.+.|++.|++|++|++|++|+. ++....+...|| +++.||.||+|++.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~-~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE-KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS-SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC-CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 367888889999999999999999999852 222344555676 36999999999873
No 214
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.44 E-value=7.3e-05 Score=84.08 Aligned_cols=37 Identities=22% Similarity=0.158 Sum_probs=33.3
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVK 46 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~ 46 (1428)
.+||+|||||||||++|+.|++.+ ++|+|+|+++.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G--~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCC
Confidence 589999999999999999999975 8999999987663
No 215
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.43 E-value=6.4e-05 Score=93.16 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=33.0
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
.++||+|||||++|++||..|++.|++|+|+|+++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 46899999999999999999999999999999964
No 216
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.42 E-value=6.3e-05 Score=87.05 Aligned_cols=40 Identities=30% Similarity=0.448 Sum_probs=36.2
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
++||+|||||++|++||+.|++.|++|+|+|+ ..+||.+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 58999999999999999999999999999999 46777654
No 217
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.41 E-value=6.4e-05 Score=93.32 Aligned_cols=57 Identities=18% Similarity=0.199 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCC-eE--EEEEecCCc-EEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNN-KV--NKVHLKNGQ-IFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~-~v--~~V~~~~G~-~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..+++ ++ +.|++.+|+ ++.||.||+|++..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 56788899999999999999999999987544 33 467788887 89999999999743
No 218
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.41 E-value=6.3e-05 Score=91.28 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=39.0
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
..+||+|||||++||+||+.|++.|++|+|+|+.+.+||...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 468999999999999999999999999999999999999753
No 219
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.40 E-value=0.00023 Score=88.04 Aligned_cols=142 Identities=14% Similarity=0.152 Sum_probs=85.3
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCC-CCcccccccccCC-CCcccCcchhHHHHHHHHHhcCCCceEEEee
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD-KLSWINLKFQFGV-GYPNTNQGLWNSIIAWYLKQYNPKLNVLLLE 388 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~-~~~~~~~~~~~~~-~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~ 388 (1428)
++|+||+|+|++|+.+|++||+.|++|+|||+.+ .. |. +-.++-+|+....+...+.... .
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~i---------G~~~Cnps~GGia~g~lv~eldalg-g------- 89 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTI---------GQMSCNPAIGGIAKGIVVREIDALG-G------- 89 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT---------TCCCSCSEEECTTHHHHHHHHHHHT-C-------
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEeccccc---------CCcCccccccccchHHHHHHHHHhh-h-------
Confidence 4689999999999999999999999999999874 22 10 0111223443322221111000 0
Q ss_pred cCCCCCCceeeeccCCcCcccccccccccccccCccEEEcC----CCcccccccceeeechHHHHHHHHHhcc-CCeEEe
Q psy10545 389 LSSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFP----KFNRKIFSGYYSICSKHLNSYLIRALGI-NNFLFN 463 (1428)
Q Consensus 389 ~~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~~~~~ 463 (1428)
.|..+. + ...+.+. ........+...+++..+.+.|.+.+.+ .|+.+.
T Consensus 90 --------~~~~~~-----------d--------~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~ 142 (637)
T 2zxi_A 90 --------EMGKAI-----------D--------QTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK 142 (637)
T ss_dssp --------SHHHHH-----------H--------HHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE
T ss_pred --------HHHHHh-----------h--------hcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 000000 0 0001110 0001112234567889999999999987 474335
Q ss_pred cceEEEEeC--Ce---EEEcCCcEEEeeEEEecCCCCC
Q psy10545 464 NKTVEIITP--TS---IRINNKKIINANCIIDGRGLKN 496 (1428)
Q Consensus 464 ~~~v~~i~~--~~---v~l~~g~~~~a~lvI~AdG~~S 496 (1428)
++.|+++.. +. |.+.+|.+++|+.||.|+|..+
T Consensus 143 ~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 143 QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 678988752 22 6777888999999999999884
No 220
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.39 E-value=5.9e-05 Score=92.89 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec--CC--cEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK--NG--QIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~--~G--~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++. ++|+++++|++|..+++++ .|++. +| +++.+|.||+|++.
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAV-EVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSE-EEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEE-EEEEEeCCCceEEEECCEEEEeeCC
Confidence 56778888888887 9999999999999877764 35554 67 67999999999965
No 221
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.38 E-value=6.4e-05 Score=92.32 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=37.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++|++||..|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46899999999999999999999999999999998777654
No 222
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.38 E-value=5.9e-05 Score=92.44 Aligned_cols=41 Identities=27% Similarity=0.430 Sum_probs=38.2
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999989998653
No 223
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.36 E-value=7e-05 Score=87.17 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=36.7
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEcc----CCCCCCcc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQ----RDKPGGRA 750 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa----~~~~GGr~ 750 (1428)
+.++||+|||||++|+++|+.|++.|++|+|+|+ ...+||.+
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~ 51 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQL 51 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCcee
Confidence 4568999999999999999999999999999998 45566653
No 224
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.36 E-value=7.3e-05 Score=91.70 Aligned_cols=41 Identities=29% Similarity=0.460 Sum_probs=38.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 46899999999999999999999999999999998898865
No 225
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.34 E-value=6.6e-05 Score=92.15 Aligned_cols=41 Identities=29% Similarity=0.498 Sum_probs=38.3
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 46899999999999999999999999999999998898865
No 226
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.31 E-value=6.4e-05 Score=88.29 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=33.4
Q ss_pred ceeeecCCCcchHHHHHHHHhCC------CeEEEEccCCCCCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAG------ISTIILEQRDKPGG 748 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G------~~V~VlEa~~~~GG 748 (1428)
+||+|||||++||++|++|+++| ++|+|+|++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 48999999999999999999998 99999999875444
No 227
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.30 E-value=7.4e-05 Score=91.81 Aligned_cols=41 Identities=29% Similarity=0.427 Sum_probs=38.0
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 46899999999999999999999999999999988888855
No 228
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.30 E-value=7.9e-05 Score=91.17 Aligned_cols=40 Identities=38% Similarity=0.452 Sum_probs=36.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 4689999999999999999999999999999998 677654
No 229
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.29 E-value=7.5e-05 Score=91.75 Aligned_cols=41 Identities=29% Similarity=0.416 Sum_probs=37.1
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
+.++||+|||||++||+||..|++.|++|+|+|++ .+||.|
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTC 58 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcc
Confidence 45689999999999999999999999999999976 678765
No 230
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.29 E-value=0.0001 Score=90.73 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=37.0
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEcc--------CCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQ--------RDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa--------~~~~GGr~ 750 (1428)
.++||+|||||++|++||..|++.|++|+|+|+ ...+||.|
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCee
Confidence 469999999999999999999999999999998 55678855
No 231
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.28 E-value=0.00033 Score=82.47 Aligned_cols=110 Identities=24% Similarity=0.271 Sum_probs=78.2
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
+|++|+|+|++|+.+|+.|+++|++|+|||+.+.. | |.+.. ..|.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----------------g-g~~~~--------~~~~---------- 59 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----------------G-GQLAA--------LYPE---------- 59 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----------------C-HHHHH--------TCTT----------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----------------C-Ccccc--------cCCC----------
Confidence 47899999999999999999999999999987654 1 21110 0111
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
.. .+. .+ ....+.+..+.+.|.+.+.+.+ .++.+++|+.+
T Consensus 60 ----------------------~~--~~~-------~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i 100 (360)
T 3ab1_A 60 ----------------------KH--IYD-------VA--------GFPEVPAIDLVESLWAQAERYNPDVVLNETVTKY 100 (360)
T ss_dssp ----------------------SE--ECC-------ST--------TCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEE
T ss_pred ----------------------cc--ccc-------CC--------CCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEE
Confidence 00 000 00 0112567788888888887777 57778899988
Q ss_pred eCC-----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 471 TPT-----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 471 ~~~-----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
... .|++.+|.+++++.||.|+|.+
T Consensus 101 ~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 101 TKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp EECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred EECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 642 2677788899999999999987
No 232
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.28 E-value=0.00011 Score=90.34 Aligned_cols=56 Identities=11% Similarity=0.029 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCc-----EEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQ-----IFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~-----~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|++++.|++|..++++...|++.+++ ++.+|.||++++.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 4567777888888888898888888888754432456665543 6888888888864
No 233
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.28 E-value=0.0001 Score=94.60 Aligned_cols=42 Identities=29% Similarity=0.397 Sum_probs=39.6
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEee
Confidence 568999999999999999999999999999999999999765
No 234
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.27 E-value=7.3e-05 Score=86.80 Aligned_cols=40 Identities=28% Similarity=0.364 Sum_probs=36.0
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVK 46 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~ 46 (1428)
.++|++|||+|||||++|++|++.+.+++|+|+|+++..+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 4689999999999999999998876789999999988773
No 235
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.27 E-value=0.00039 Score=86.35 Aligned_cols=143 Identities=14% Similarity=0.109 Sum_probs=83.8
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCC-CCcccCcchhHHHHHHHHHhcCCCceEEEeec
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGV-GYPNTNQGLWNSIIAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~-~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~ 389 (1428)
++|+||+|+|++|+.+|++||+.|.+|+|||+.+.. .|. +--+.-+|+....+...+.... .
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~--------iG~~~c~ps~gGia~~~lv~el~al~-g-------- 83 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSA--------VARMSCNPAIGGVAKGQITREIDALG-G-------- 83 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG--------TTCCSSCSEEECHHHHHHHHHHHHHT-C--------
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccc--------cCCCccccchhhhhHHHHHHHHHhcc-c--------
Confidence 358999999999999999999999999999987421 010 0011123332222221110000 0
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCccEEEcC----CCcccccccceeeechHHHHHHHHHhcc-CCeEEec
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFP----KFNRKIFSGYYSICSKHLNSYLIRALGI-NNFLFNN 464 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~~~~~~ 464 (1428)
....| +....+.|. ........+...+++..+.+.|.+.+.+ .|+.+..
T Consensus 84 -------~~~~~-------------------~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~ 137 (641)
T 3cp8_A 84 -------EMGKA-------------------IDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ 137 (641)
T ss_dssp -------SHHHH-------------------HHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE
T ss_pred -------HHHHH-------------------HHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe
Confidence 00000 000011110 0001112234578999999999999977 4743345
Q ss_pred ceEEEEe--CCe---EEEcCCcEEEeeEEEecCCCCC
Q psy10545 465 KTVEIIT--PTS---IRINNKKIINANCIIDGRGLKN 496 (1428)
Q Consensus 465 ~~v~~i~--~~~---v~l~~g~~~~a~lvI~AdG~~S 496 (1428)
..|+.+. .+. |++.+|.+++|+.||.|+|..+
T Consensus 138 ~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 138 DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 6888865 333 6677888999999999999884
No 236
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.24 E-value=0.0002 Score=88.90 Aligned_cols=48 Identities=17% Similarity=0.066 Sum_probs=40.4
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEecc
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQT 55 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w~~ 55 (1428)
.++||+|||||+|||++|++|++.. +.+|+|+|+++..+.+.++++..
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~-G~~V~VlE~~~~~GG~~~T~~~~ 56 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQID-GPSWMIVDSNETPGGLASTDVTP 56 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHC-CSCEEEEESSSSCCGGGCEEECT
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhC-CCCEEEEECCCCCcCCeeeEEec
Confidence 4699999999999999999998752 57999999999886566666653
No 237
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.22 E-value=0.00011 Score=89.95 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec-C--Cc--EEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK-N--GQ--IFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~-~--G~--~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++ +.|++. + |+ ++.+|.||+|++.
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKKDG-LHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-EEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCE-EEEEEeecCCCceeEEEcCEEEECCCc
Confidence 556777888888889999999999999877765 456665 6 76 7899999999864
No 238
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.21 E-value=0.00011 Score=90.21 Aligned_cols=40 Identities=25% Similarity=0.406 Sum_probs=37.5
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 5899999999999999999999999999999988888754
No 239
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.21 E-value=0.00024 Score=83.25 Aligned_cols=122 Identities=18% Similarity=0.222 Sum_probs=78.2
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
++++|+|+|++|+.+|..|++.|++|+|+|+.+.+ | |.+.. ..|..+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~----------------g-g~~~~--------~~~~~~~------- 51 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASP----------------G-GAWQH--------AWHSLHL------- 51 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSS----------------S-GGGGG--------SCTTCBC-------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC----------------C-CcccC--------CCCCcEe-------
Confidence 46789999999999999999999999999988755 1 11110 0111000
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
. ........... ..+ ........+..+.+.|.+.+.+.+ .++.+++|+++
T Consensus 52 ---------~------------~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i 102 (357)
T 4a9w_A 52 ---------F------------SPAGWSSIPGW--PMP------ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRV 102 (357)
T ss_dssp ---------S------------SCGGGSCCSSS--CCC------CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEE
T ss_pred ---------c------------CchhhhhCCCC--CCC------CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEE
Confidence 0 00000000000 000 111223467888999998888877 68888999988
Q ss_pred eCC--e---EEEcCCcEEEeeEEEecCCCC
Q psy10545 471 TPT--S---IRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 471 ~~~--~---v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
..+ . |++.+| +++++.||.|+|..
T Consensus 103 ~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 103 SHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp EEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred EECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 643 3 555555 89999999999986
No 240
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.21 E-value=0.00039 Score=76.22 Aligned_cols=54 Identities=11% Similarity=-0.047 Sum_probs=43.1
Q ss_pred echHHHHHHHHHhccC-Ce-EEecceEEEEeCC-----eEEEcCCcEEEeeEEEecCCCCCC
Q psy10545 443 CSKHLNSYLIRALGIN-NF-LFNNKTVEIITPT-----SIRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 443 ~r~~l~~~L~~~~~~~-~~-~~~~~~v~~i~~~-----~v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
++..+.+.|.+.+++. |+ ++ +++|+++..+ .|++.+|.+++|+.||.|+|..|.
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 7888999999999876 74 45 6789888632 266778888999999999999854
No 241
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.20 E-value=0.00013 Score=84.95 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=36.1
Q ss_pred cccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
+.++||+|||||++|++||..|++.|++|+|+|+. .+||.+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 34689999999999999999999999999999975 667643
No 242
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.19 E-value=0.00013 Score=89.22 Aligned_cols=55 Identities=13% Similarity=0.093 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..+++. +.|.++ +.++.+|.||+|++..
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGE-FVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTE-EEEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEEC-CcEEEcCEEEECCCCC
Confidence 567888888899999999999999999877664 567776 4589999999999764
No 243
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.19 E-value=0.00013 Score=88.19 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=31.9
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999976
No 244
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.17 E-value=0.0003 Score=73.64 Aligned_cols=102 Identities=14% Similarity=0.106 Sum_probs=72.9
Q ss_pred HHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCCC
Q psy10545 313 IRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSSS 392 (1428)
Q Consensus 313 ~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s~ 392 (1428)
+++|+|+|+.|+..|..|++.|.+|+|+|+.+......
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------------------------------------------ 40 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------------------------------------------ 40 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------------------------------------------
Confidence 46799999999999999999999999999876330000
Q ss_pred CCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEEe
Q psy10545 393 VKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEIIT 471 (1428)
Q Consensus 393 ~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~ 471 (1428)
+ .+ . .++. ++ ..+....+.+.+.+.+++.| .++.+ +|++++
T Consensus 41 -----~-----~~--------~-----~~~~----~~----------~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~ 82 (180)
T 2ywl_A 41 -----S-----RV--------P-----NYPG----LL----------DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVR 82 (180)
T ss_dssp -----S-----CC--------C-----CSTT----CT----------TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEE
T ss_pred -----h-----hh--------h-----ccCC----Cc----------CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEE
Confidence 0 00 0 0000 00 12455678888888888888 57777 888886
Q ss_pred CC--e--EEEcCCcEEEeeEEEecCCCC
Q psy10545 472 PT--S--IRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 472 ~~--~--v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.+ . |++.+| ++.++.||.|+|..
T Consensus 83 ~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 83 DMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp ECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred EcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 43 2 666777 89999999999988
No 245
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.17 E-value=0.0026 Score=77.17 Aligned_cols=185 Identities=10% Similarity=0.035 Sum_probs=100.2
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeC---------------C-e----EEEcCCcEE--EeeEEEecCCCCC
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITP---------------T-S----IRINNKKII--NANCIIDGRGLKN 496 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~---------------~-~----v~l~~g~~~--~a~lvI~AdG~~S 496 (1428)
..++...+.+.|.+.+.+.| .++.+++|+++.. + + |.+.+| ++ +|+.||.|.|..|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 45677899999999998888 6788899998864 2 2 455566 68 9999999999875
Q ss_pred CCC------CcceEEEEEEEEEecCCcC-CC-------------CceEEecccCCCCCcceEEEEeeCCC-CceEEEeEE
Q psy10545 497 SQF------DGIYQIFLGQQWNLSSPHG-LD-------------IPIIMDATVNQKNDEYHFIYTLPLTP-NSLMIEDTR 555 (1428)
Q Consensus 497 ~~~------~~~~q~~~g~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~g~~f~~~lPl~~-~~~~v~~~~ 555 (1428)
..+ .......-|.-+.++.+.. .. .+.+.+. ..+|+.|..+ +.+.++.+.
T Consensus 255 ~~l~~~~g~~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---------~~~y~~p~~~~g~~~iG~~~ 325 (448)
T 3axb_A 255 NRLLNPLGIDTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILP---------KRVLVRPAPREGSFWVQLSD 325 (448)
T ss_dssp HHHHGGGTCCCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEET---------TTEEEEEETTTTEEEEEECC
T ss_pred HHHHHHcCCCCcccccceEEEEeCCcccccccccccccccccCCCceEEcC---------CceEEeecCCCCeEEEecCC
Confidence 411 1111222222222322211 00 1122111 1257788877 677777654
Q ss_pred ec----cC-C--CCCHHHHHHHHHHHHHH-cC-Cccceeeeeeeeeecc-cCCchhhhhccCcccccccc-ccccc--CC
Q psy10545 556 YT----KK-P--FLKIDMLKKSIKDYAIK-NR-WKLKNIEREEIGSIPI-ALKNEKIIKFKKTICVGLRA-NLLHA--TT 622 (1428)
Q Consensus 556 ~~----~~-~--~~~~~~~~~~l~~~~~~-~~-~~~~~~~~~~~~~~Pl-~~~~~~~~~~~rv~lvGdAA-~~vhP--~~ 622 (1428)
.. .. . ..+.+.+.+.+.+.+.+ ++ +...++...-.+..|+ .. ++.-+||... +.+.- ..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G~r~~~t~--------d~~p~ig~~~~~l~~a~G~~ 397 (448)
T 3axb_A 326 NLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDISFD--------ANPVVFEPWESGIVVAAGTS 397 (448)
T ss_dssp CTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEEEEEEETT--------SSCEEECGGGCSEEEEECCT
T ss_pred cccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEEEeccccC--------CCCcEeeecCCCEEEEECCC
Confidence 31 11 1 11222214444444443 22 1112333333456666 32 2333455432 22222 24
Q ss_pred CCChHHHHHHHHHHHhhccc
Q psy10545 623 GYSLPIAIQLAENIAKYSIT 642 (1428)
Q Consensus 623 G~G~~~a~~la~~l~~~~~~ 642 (1428)
|.||..+..+++.+++.+..
T Consensus 398 g~G~~~ap~~g~~la~~i~~ 417 (448)
T 3axb_A 398 GSGIMKSDSIGRVAAAVALG 417 (448)
T ss_dssp TCCGGGHHHHHHHHHHHHTT
T ss_pred chhHhHhHHHHHHHHHHHcC
Confidence 66898888888888887664
No 246
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.17 E-value=0.00071 Score=81.01 Aligned_cols=57 Identities=19% Similarity=0.093 Sum_probs=44.4
Q ss_pred ceeeechHHHHHHHHHhccCC-eEEecceEE---------EEeCCe----EEEcCCcEEEeeEEEecCCCCC
Q psy10545 439 YYSICSKHLNSYLIRALGINN-FLFNNKTVE---------IITPTS----IRINNKKIINANCIIDGRGLKN 496 (1428)
Q Consensus 439 ~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~---------~i~~~~----v~l~~g~~~~a~lvI~AdG~~S 496 (1428)
...++...+.+.|.+.+.+.| .++.+++|+ ++..++ |++.+| +++|+.||.|+|..|
T Consensus 166 ~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 166 ALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp CEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred CEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 356788999999999998888 677888998 776432 444444 899999999999986
No 247
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.17 E-value=0.0002 Score=92.30 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=39.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 468999999999999999999999999999999999999765
No 248
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.16 E-value=0.0002 Score=82.30 Aligned_cols=39 Identities=26% Similarity=0.257 Sum_probs=35.1
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGR 749 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr 749 (1428)
|+||+|||||++|+.||+.|++.|++|+|+|++...+.-
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp 39 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTP 39 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCc
Confidence 479999999999999999999999999999998765543
No 249
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.16 E-value=0.00034 Score=87.17 Aligned_cols=130 Identities=19% Similarity=0.277 Sum_probs=79.8
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+.|++|+|+|+.|+.+|..|++.|++|+|+|+.+.. ||.+.. ...|..+. +..
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~-----------------GG~w~~-------~~~pg~~~---d~~ 68 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV-----------------GGVWYW-------NRYPGARC---DIE 68 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS-----------------CTHHHH-------CCCTTCBC---SSC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC-----------------CCcccc-------cCCCceee---ccc
Confidence 457899999999999999999999999999998755 233211 11222110 000
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC---eEEecceE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN---FLFNNKTV 467 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~---~~~~~~~v 467 (1428)
+ .....++ . + .....+.| ......+.++.+.|...+.+.+ .++.+++|
T Consensus 69 ~--~~~~~~f-~----~------~~~~~~~~----------------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V 119 (542)
T 1w4x_A 69 S--IEYCYSF-S----E------EVLQEWNW----------------TERYASQPEILRYINFVADKFDLRSGITFHTTV 119 (542)
T ss_dssp T--TTSSCCS-C----H------HHHHHCCC----------------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCE
T ss_pred c--ccccccc-C----h------hhhhccCc----------------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEE
Confidence 0 0000000 0 0 00000011 1123456777777777665543 47788999
Q ss_pred EEEeC--C----eEEEcCCcEEEeeEEEecCCCCC
Q psy10545 468 EIITP--T----SIRINNKKIINANCIIDGRGLKN 496 (1428)
Q Consensus 468 ~~i~~--~----~v~l~~g~~~~a~lvI~AdG~~S 496 (1428)
++++. + .|++.+|.+++|+.||.|+|..|
T Consensus 120 ~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 120 TAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp EEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred EEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 88863 2 27777888999999999999874
No 250
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.15 E-value=0.00012 Score=89.41 Aligned_cols=41 Identities=32% Similarity=0.545 Sum_probs=37.6
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 468999999999999999999999999999999 78888764
No 251
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.15 E-value=0.00036 Score=83.21 Aligned_cols=54 Identities=9% Similarity=0.081 Sum_probs=43.4
Q ss_pred echHHHHHHHHHhccCC-eEEecceEEEEeCC-----e---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 443 CSKHLNSYLIRALGINN-FLFNNKTVEIITPT-----S---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 443 ~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~-----~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
++..+.+.|.+.+.+.| .++.+++|+++..+ . |++.+| +++|+.||.|+|..|.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 67888889999998888 68889999888632 2 555555 7999999999999964
No 252
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.13 E-value=0.0002 Score=87.39 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=37.5
Q ss_pred ceeeecCCCcchHHHHHHHHh---CCCe---EEEEccCCCCCCcce
Q psy10545 712 KIRIFSGAGIGGIALAIRLQT---AGIS---TIILEQRDKPGGRAY 751 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~---~G~~---V~VlEa~~~~GGr~~ 751 (1428)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 699999999999999999999 9999 999999999998654
No 253
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.12 E-value=0.00019 Score=88.38 Aligned_cols=41 Identities=17% Similarity=0.045 Sum_probs=32.7
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
..+||||||+|++||++|+.|.+.|...+++|+.+..|+.-
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 45899999999999999999999998888888887776643
No 254
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.11 E-value=0.00058 Score=79.41 Aligned_cols=110 Identities=17% Similarity=0.244 Sum_probs=77.1
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
++++|+|+|++|+.+|..|++.|++|+|+|+.+.. +|.+.. ..|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----------------gg~~~~--------~~~~---------- 50 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP-----------------GGQLTA--------LYPE---------- 50 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS-----------------CHHHHH--------TCTT----------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC-----------------CCeeec--------cCCC----------
Confidence 46789999999999999999999999999988654 121110 0111
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
.. .+. .+ ....+....+.+.|.+.+.+.+ .++.+++|+.+
T Consensus 51 ----------------------~~--~~~-------~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i 91 (335)
T 2zbw_A 51 ----------------------KY--IYD-------VA--------GFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETL 91 (335)
T ss_dssp ----------------------SE--ECC-------ST--------TCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEE
T ss_pred ----------------------ce--eec-------cC--------CCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 00 000 00 0012456778888888887766 56778899888
Q ss_pred eCC--e--EEEcCCcEEEeeEEEecCCCC
Q psy10545 471 TPT--S--IRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 471 ~~~--~--v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+ . |++.+|.+++++.||.|+|.+
T Consensus 92 ~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 92 EREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred EECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 643 2 666778889999999999987
No 255
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.10 E-value=0.00024 Score=89.57 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=37.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
..+||+|||||++|++||+.|++.|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35899999999999999999999999999999999988744
No 256
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.09 E-value=0.00017 Score=88.00 Aligned_cols=39 Identities=33% Similarity=0.505 Sum_probs=36.1
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcc
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRA 750 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~ 750 (1428)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 589999999999999999999999999999998 778754
No 257
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.07 E-value=0.00035 Score=80.28 Aligned_cols=54 Identities=11% Similarity=-0.017 Sum_probs=41.8
Q ss_pred eeechHHHHHHHHHhccCC-eEEecceEEEEeC--C--eEEEcCCcEEEeeEEEecCCCC
Q psy10545 441 SICSKHLNSYLIRALGINN-FLFNNKTVEIITP--T--SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 441 ~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~--~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.+++..+.+.+.+.+.+.+ .++. ++|+++.. + .|++.+|.+++++.||.|+|..
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEE
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCC
Confidence 4677888888888887777 4555 78888763 3 3667788899999999999965
No 258
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.06 E-value=0.00025 Score=81.58 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=32.2
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
|+..||++||||||||+++|.+|++.+ ++|+|+|+..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g--~~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSS--LKPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEecCC
Confidence 445799999999999999999999964 7999999864
No 259
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.02 E-value=0.00042 Score=84.29 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=39.5
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
|...+|+||||+|++||++|++|++.+ ++|+++|+++..+.++.++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~t~ 53 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDG--KKVLHIDKQDHYGGEAASV 53 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGCEE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCCCCCccccce
Confidence 445799999999999999999999965 7999999999886566664
No 260
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.02 E-value=0.00023 Score=86.49 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=38.8
Q ss_pred cccceeeecCCCcchHHHHHHHHh-C------CCeEEEEccCCCCCCcce
Q psy10545 709 FFDKIRIFSGAGIGGIALAIRLQT-A------GISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 709 ~~~~dViIIGaGiaGLsAA~~La~-~------G~~V~VlEa~~~~GGr~~ 751 (1428)
|.++||+|||||++|++||..|++ . |++|+|+|+.+.+||.+.
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 346899999999999999999999 7 999999999999998764
No 261
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.01 E-value=0.00028 Score=82.04 Aligned_cols=128 Identities=15% Similarity=0.113 Sum_probs=75.7
Q ss_pred ChhhHhhhccCCCChHHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHH
Q psy10545 295 PDKIIRNFYANKLSFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWY 374 (1428)
Q Consensus 295 ~~~~~~~Fl~~~~~~~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~ 374 (1428)
+.......+......+..+++|+|+|++|+.+|..|+++|++|+|+|+.+...+ .-||.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~-------------~~gg~~~~----- 67 (338)
T 3itj_A 6 HHHHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGI-------------AAGGQLTT----- 67 (338)
T ss_dssp ---------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB-------------CTTCGGGG-----
T ss_pred cccccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCC-------------CcCccccc-----
Confidence 333334444444444556899999999999999999999999999998652100 00111000
Q ss_pred HHhcCCCceEEEeecCCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHH
Q psy10545 375 LKQYNPKLNVLLLELSSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRA 454 (1428)
Q Consensus 375 ~~~~~~~~rv~~l~~~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~ 454 (1428)
. . ....++ .....+.+..+...+.+.
T Consensus 68 --------------------------~------------~---------~~~~~~-------~~~~~~~~~~~~~~~~~~ 93 (338)
T 3itj_A 68 --------------------------T------------T---------EIENFP-------GFPDGLTGSELMDRMREQ 93 (338)
T ss_dssp --------------------------S------------S---------EECCST-------TCTTCEEHHHHHHHHHHH
T ss_pred --------------------------c------------h---------hhcccC-------CCcccCCHHHHHHHHHHH
Confidence 0 0 000000 111236678888889998
Q ss_pred hccCC-eEEecceEEEEeCCe--EEE-----cCCcEEEeeEEEecCCCC
Q psy10545 455 LGINN-FLFNNKTVEIITPTS--IRI-----NNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 455 ~~~~~-~~~~~~~v~~i~~~~--v~l-----~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+.+ .++.++ |+++..+. +++ .++.++.++.||.|+|..
T Consensus 94 ~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 94 STKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCC
Confidence 88878 566666 88887543 433 366789999999999965
No 262
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.01 E-value=0.003 Score=77.00 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=32.3
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKP 746 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~ 746 (1428)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 47999999999999999999999999999997654
No 263
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.01 E-value=0.00022 Score=87.96 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcE-EEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQI-FDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~-i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|..++++...|++.+|++ +.+|.||+|++.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 56788889999999999999999999987653335678889987 999999999974
No 264
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.97 E-value=0.00039 Score=89.00 Aligned_cols=42 Identities=26% Similarity=0.390 Sum_probs=39.1
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 468999999999999999999999999999999999998753
No 265
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.97 E-value=0.00033 Score=85.16 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++. +++++++.|++|..++ ++..| ..+|+++.+|.||+|++..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEE-EETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEE-EeCCCEEECCEEEEeeCCc
Confidence 56777888888888 9999999999997554 43444 4467789999999999753
No 266
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.95 E-value=0.0013 Score=81.58 Aligned_cols=129 Identities=17% Similarity=0.215 Sum_probs=83.2
Q ss_pred HHHHHHhcCCchHHHHHHHHh-hcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeec
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQ-TAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLEL 389 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La-~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~ 389 (1428)
+.+++|+|+|+.|+.+|..|+ +.|++|+|||+.+.. ||.+.. ...|+.+.-.-+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~-----------------GGtw~~-------~~ypg~~~d~~s~ 63 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP-----------------GGTWYW-------NRYPGALSDTESH 63 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS-----------------CTHHHH-------CCCTTCEEEEEGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC-----------------CCcccc-------cCCCCceecCCcc
Confidence 357899999999999999999 999999999998755 222211 1223322110000
Q ss_pred CCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCC-cccccccceeeechHHHHHHHHHhccCC---eEEecc
Q psy10545 390 SSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKF-NRKIFSGYYSICSKHLNSYLIRALGINN---FLFNNK 465 (1428)
Q Consensus 390 ~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~~---~~~~~~ 465 (1428)
. . ...+... ............+.++.+.|.+.+.+.+ .++.++
T Consensus 64 --------------------~--------~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~ 110 (540)
T 3gwf_A 64 --------------------L--------Y-----RFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGT 110 (540)
T ss_dssp --------------------G--------S-----SCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESC
T ss_pred --------------------e--------e-----eeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEecc
Confidence 0 0 0000000 0000111234678888888888887766 477889
Q ss_pred eEEEEeC--C----eEEEcCCcEEEeeEEEecCCCCC
Q psy10545 466 TVEIITP--T----SIRINNKKIINANCIIDGRGLKN 496 (1428)
Q Consensus 466 ~v~~i~~--~----~v~l~~g~~~~a~lvI~AdG~~S 496 (1428)
+|+++.. + .|++.+|.+++++.||.|+|..|
T Consensus 111 ~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 111 EVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred EEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 9988863 2 37888888999999999999863
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.93 E-value=0.00034 Score=81.26 Aligned_cols=52 Identities=17% Similarity=0.159 Sum_probs=40.1
Q ss_pred eechHHHHHHHHHhccCC-eEEecceEEEEeCC----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 442 ICSKHLNSYLIRALGINN-FLFNNKTVEIITPT----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 442 i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+..+.+.|.+.+.+.+ .++.+. |+.+... .|++ +|.+++++.||.|+|..
T Consensus 67 ~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 67 ILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 667788888888887777 566554 8888643 2555 77889999999999976
No 268
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.89 E-value=0.00062 Score=81.25 Aligned_cols=48 Identities=21% Similarity=0.309 Sum_probs=40.2
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
|..++|++|||||+|||++|++|.+. ++.+|+|+|+++..+.+++++-
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~-~g~~v~v~E~~~~~GG~~~~~~ 51 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQ-LDKRVLVLERRPHIGGNAYSEA 51 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHH-SCCCEEEECSSSSSSGGGCEEE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCCCCCCeeeecc
Confidence 55579999999999999999999987 2479999999988865666654
No 269
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.89 E-value=0.00054 Score=78.82 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=31.3
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
.+||++||||||||+++|.+|++.+ ++|+|||+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g--~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRAN--LKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEecCC
Confidence 4799999999999999999999964 7999999753
No 270
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.88 E-value=0.00046 Score=85.84 Aligned_cols=39 Identities=28% Similarity=0.403 Sum_probs=33.4
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.++||+||||+|+||+.+|.||++. ++.+|+|||.++..
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGEEP 53 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSBCC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCCCCC
Confidence 4589999999999999999999984 57899999998654
No 271
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.86 E-value=0.00042 Score=92.05 Aligned_cols=42 Identities=26% Similarity=0.462 Sum_probs=39.8
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++||+||..|++.|++|+|+|+++.+||++.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999886
No 272
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.85 E-value=0.0034 Score=76.17 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=37.8
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 937 LIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 937 L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
+.+.+++.|++|+++++|++|..+ +++..|.+ +|+++.+|.||+|++..
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred HHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 344566779999999999999865 55445666 56689999999999753
No 273
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.85 E-value=0.00097 Score=80.98 Aligned_cols=56 Identities=9% Similarity=-0.108 Sum_probs=43.6
Q ss_pred eeechHHHHHHHHHhccCC-eEEecceEEEEeCC----eEEEcC---Cc---EEEeeEEEecCCCCC
Q psy10545 441 SICSKHLNSYLIRALGINN-FLFNNKTVEIITPT----SIRINN---KK---IINANCIIDGRGLKN 496 (1428)
Q Consensus 441 ~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~----~v~l~~---g~---~~~a~lvI~AdG~~S 496 (1428)
.+.+..+.+.|.+.+.+.+ .++.+++|++++.. .|++.+ |. ++.+|.||.|+|..|
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 3578889999988887655 57778999988642 266654 66 799999999999874
No 274
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.85 E-value=0.0038 Score=76.49 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=31.6
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDK 745 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~ 745 (1428)
.+++|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 4799999999999999999999999999998764
No 275
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.81 E-value=0.00052 Score=91.81 Aligned_cols=41 Identities=27% Similarity=0.374 Sum_probs=38.2
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCC-eEEEEccCCCCCCcc
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGI-STIILEQRDKPGGRA 750 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~-~V~VlEa~~~~GGr~ 750 (1428)
..+||+|||||++||+||..|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 36799999999999999999999999 799999999999974
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.81 E-value=0.0005 Score=83.55 Aligned_cols=42 Identities=21% Similarity=0.109 Sum_probs=38.0
Q ss_pred ccceeeecCCCcchHHHHHHHHhCC--CeEEEEccCCCCCCcce
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAG--ISTIILEQRDKPGGRAY 751 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G--~~V~VlEa~~~~GGr~~ 751 (1428)
.++||+|||||++|++||..|++.| ++|+|+|+.+.+||+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4579999999999999999999998 99999999999998763
No 277
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.80 E-value=0.0011 Score=76.66 Aligned_cols=107 Identities=19% Similarity=0.126 Sum_probs=73.0
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
.++++|+|+|++|+.+|..|++.|++|+|+|+.. + |+-+..
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----------------gg~~~~---------------------- 48 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-P----------------GGQIAW---------------------- 48 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-T----------------TGGGGG----------------------
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-C----------------Cccccc----------------------
Confidence 3578999999999999999999999999999872 2 111100
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEI 469 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~ 469 (1428)
.. .+ .. ++. ....+.+..+.+.+.+.+.+.| .++. .+|++
T Consensus 49 ----------~~-~~-------------~~-------~~~-------~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 89 (325)
T 2q7v_A 49 ----------SE-EV-------------EN-------FPG-------FPEPIAGMELAQRMHQQAEKFGAKVEM-DEVQG 89 (325)
T ss_dssp ----------CS-CB-------------CC-------STT-------CSSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEE
T ss_pred ----------cc-cc-------------cc-------CCC-------CCCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEE
Confidence 00 00 00 000 0012456678888888887777 4444 67887
Q ss_pred EeCC-------eEEEcCCcEEEeeEEEecCCCC
Q psy10545 470 ITPT-------SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 470 i~~~-------~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+... .|++.+|.+++++.||.|+|..
T Consensus 90 i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 90 VQHDATSHPYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp EEECTTSSSCCEEEEESSCEEEEEEEEECCCEE
T ss_pred EEeccCCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 7533 3566788899999999999965
No 278
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.79 E-value=0.001 Score=75.55 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=74.1
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
++++|+|+|+.|+.+|..|++.|++|+|+|+.+.. + ..+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~---~---------------------------~~~~---------- 42 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR---N---------------------------RFAS---------- 42 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG---G---------------------------GGCS----------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc---c---------------------------ccch----------
Confidence 35789999999999999999999999999986532 0 0000
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccC-CeEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGIN-NFLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~-~~~~~~~~v~~i 470 (1428)
+. .. ++. ...+....+.+.+.+.+.+. ++.+...+|+.+
T Consensus 43 ---------~~----------------~~-------~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 82 (297)
T 3fbs_A 43 ---------HS----------------HG-------FLG--------QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDA 82 (297)
T ss_dssp ---------CC----------------CS-------STT--------CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEE
T ss_pred ---------hh----------------cC-------CcC--------CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEE
Confidence 00 00 000 01244577888888888776 455556689888
Q ss_pred eCC----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 471 TPT----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 471 ~~~----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
..+ .|++.+|.+++++.||.|+|..
T Consensus 83 ~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 83 KGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp EEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred EEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 743 3778888899999999999976
No 279
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.76 E-value=0.00076 Score=76.91 Aligned_cols=44 Identities=27% Similarity=0.417 Sum_probs=37.7
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCcee
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIW 50 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw 50 (1428)
.++|++|||+|+||+++|++|++.+++++|+|+|+++..+..+|
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 35799999999999999999999866789999999887743455
No 280
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.76 E-value=0.00053 Score=85.15 Aligned_cols=128 Identities=19% Similarity=0.232 Sum_probs=80.0
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+.++||+|+|+.|+.+|..|++.|++|+|||+.+.. ||.+.. ...|+.+.
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~-----------------GGtw~~-------~~yPg~~~------ 58 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV-----------------GGTWYW-------NRYPGCRL------ 58 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS-----------------CTHHHH-------CCCTTCBC------
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC-----------------CCcccc-------CCCCceee------
Confidence 357899999999999999999999999999998755 222211 12232110
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCC-CcccccccceeeechHHHHHHHHHhccCC---eEEecce
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPK-FNRKIFSGYYSICSKHLNSYLIRALGINN---FLFNNKT 466 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~~~~~---~~~~~~~ 466 (1428)
+++.... ...|.. .............+.++.+.+.+.+.+.+ .++.+++
T Consensus 59 -------------d~~~~~y--------------~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~ 111 (545)
T 3uox_A 59 -------------DTESYAY--------------GYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTR 111 (545)
T ss_dssp -------------SSCHHHH--------------CHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCC
T ss_pred -------------cCchhhc--------------ccccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCE
Confidence 0000000 000000 00000011123566777777777776654 4777889
Q ss_pred EEEEeC--C----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 467 VEIITP--T----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 467 v~~i~~--~----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
|++++. + .|++.+|.+++++.||.|+|..
T Consensus 112 V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 112 VTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp EEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred EEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 988863 2 3788888899999999999976
No 281
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.75 E-value=0.0018 Score=74.91 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=77.7
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
.+++|+|+|++|+.+|..|++.|++|+|+|+.+.. +|.+.. ..|....
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----------------gG~~~~--------~~~~~~~------- 55 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL-----------------GGQLSA--------LYPEKYI------- 55 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS-----------------CHHHHH--------HCTTSEE-------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC-----------------Cceehh--------cCCCceE-------
Confidence 46889999999999999999999999999998755 122210 0111000
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
| . ++. ...+....+.+.+.+.+.+.+ .++.+++|+.+
T Consensus 56 ---------~------------------~-------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 93 (332)
T 3lzw_A 56 ---------Y------------------D-------VAG--------FPKIRAQELINNLKEQMAKFDQTICLEQAVESV 93 (332)
T ss_dssp ---------C------------------C-------STT--------CSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEE
T ss_pred ---------e------------------c-------cCC--------CCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEE
Confidence 0 0 000 012567888899999988777 67778999988
Q ss_pred eCC-----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 471 TPT-----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 471 ~~~-----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
... .|++.+|. +.++.||.|.|..
T Consensus 94 ~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 94 EKQADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp EECTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred EECCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 642 36776665 9999999999986
No 282
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.74 E-value=0.0014 Score=74.99 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=31.4
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 344 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~ 344 (1428)
.+|++|+|+||+|+++|+.|+++|++|+|+|+..
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999763
No 283
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.70 E-value=0.0014 Score=82.05 Aligned_cols=56 Identities=14% Similarity=0.054 Sum_probs=43.8
Q ss_pred eechHHHHHHHHHhccCC-eEEecceEEEEe-CC--e---EEEc--CCc--EEEeeEEEecCCCCCC
Q psy10545 442 ICSKHLNSYLIRALGINN-FLFNNKTVEIIT-PT--S---IRIN--NKK--IINANCIIDGRGLKNS 497 (1428)
Q Consensus 442 i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~-~~--~---v~l~--~g~--~~~a~lvI~AdG~~S~ 497 (1428)
+....+.+.|.+++.+.| .++.+++|+++. .+ . |++. +|+ +++|+.||.|+|..|.
T Consensus 247 ~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 456788899999998888 688899999885 22 2 4443 665 6999999999999864
No 284
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.68 E-value=0.0062 Score=74.94 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=32.3
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKP 746 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~ 746 (1428)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 47999999999999999999999999999997653
No 285
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.67 E-value=0.0071 Score=73.46 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=38.0
Q ss_pred HHHHHHcCcEEEeCceeeEEEEeCCeEEEEEec---CCcEEEcCEEEEcCCHH
Q psy10545 938 IKLFQNLGGNLILNSQVISIYVNNNKVNKVHLK---NGQIFDADIIVSNADII 987 (1428)
Q Consensus 938 ~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~---~G~~i~ad~VV~A~~~~ 987 (1428)
.+.+++.|++|+++++|++|..++++ +.|++. +++++.+|.||++++..
T Consensus 218 ~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 218 KKRLKKKGVEVVTNALAKGAEEREDG-VTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEEeCCceeEEEcCEEEECcCCC
Confidence 34456679999999999999887766 445554 45689999999999753
No 286
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.66 E-value=0.00068 Score=85.68 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=31.9
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
.++||+|||||++||+||..|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999983
No 287
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.66 E-value=0.00096 Score=81.58 Aligned_cols=45 Identities=24% Similarity=0.354 Sum_probs=38.5
Q ss_pred cccEEEECccHHHHHHHHHHhccC----CCCeEEEEccCCCCCCceeEE
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYN----PKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~----~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
.+|++|||||++||++|++|.+.+ |+.+|+|+|+++..+.+++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~ 53 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTV 53 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEe
Confidence 589999999999999999999986 668999999998775455443
No 288
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.66 E-value=0.00042 Score=84.67 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=42.8
Q ss_pred eeechHHHHHHHHHhccCC-eEEecceEEEEeCC---------eEEEcCCc----EEEeeEEEecCCCC
Q psy10545 441 SICSKHLNSYLIRALGINN-FLFNNKTVEIITPT---------SIRINNKK----IINANCIIDGRGLK 495 (1428)
Q Consensus 441 ~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~---------~v~l~~g~----~~~a~lvI~AdG~~ 495 (1428)
...+..+.+.|...+.+.+ .++.+++|++++.. .|++.+|. +++++.||.|+|..
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 123 YPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 3567888899888887766 68888999888643 35555665 89999999999964
No 289
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.65 E-value=0.0011 Score=82.13 Aligned_cols=48 Identities=25% Similarity=0.216 Sum_probs=40.9
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEec
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQ 54 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w~ 54 (1428)
...+|++|||||+|||++|++|.+.+ ..+|+|+|++...+.++|.+..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G-~~~V~VlEa~~riGGr~~t~~~ 53 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNG-IQDCLVLEARDRVGGRLQTVTG 53 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTT-CCSEEEECSSSSSBTTCCEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcC-CCCEEEEeCCCCCCCceeeeec
Confidence 34689999999999999999999864 2799999999888777877654
No 290
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.59 E-value=0.0019 Score=80.91 Aligned_cols=55 Identities=18% Similarity=0.071 Sum_probs=42.8
Q ss_pred echHHHHHHHHHhccCC-eEEecceEEEEeC-C-e----EEEc--CCc--EEEeeEEEecCCCCCC
Q psy10545 443 CSKHLNSYLIRALGINN-FLFNNKTVEIITP-T-S----IRIN--NKK--IINANCIIDGRGLKNS 497 (1428)
Q Consensus 443 ~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~-~-~----v~l~--~g~--~~~a~lvI~AdG~~S~ 497 (1428)
....+.+.|.+++.+.| .++.+++|+++.. + + |++. +|+ +++|+.||.|+|..|.
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 34688899999998888 6888999998853 2 2 4444 565 6899999999999754
No 291
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.59 E-value=0.0015 Score=75.96 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=72.1
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSS 391 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s 391 (1428)
++++|+|+|++|+.+|..|++.|++|+|+|+.. + |+.+..
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----------------gg~~~~----------------------- 54 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-F----------------GGALMT----------------------- 54 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-C----------------SCGGGS-----------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-C----------------CCceec-----------------------
Confidence 578999999999999999999999999999642 2 111100
Q ss_pred CCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEE
Q psy10545 392 SVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEII 470 (1428)
Q Consensus 392 ~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i 470 (1428)
.. .+ .. ++ .....+.+..+.+.+.+.+.+.+ .++.+. |+++
T Consensus 55 ---------~~-~~-------------~~-------~~-------~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i 96 (335)
T 2a87_A 55 ---------TT-DV-------------EN-------YP-------GFRNGITGPELMDEMREQALRFGADLRMED-VESV 96 (335)
T ss_dssp ---------CS-CB-------------CC-------ST-------TCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEE
T ss_pred ---------cc-hh-------------hh-------cC-------CCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEE
Confidence 00 00 00 00 01112556677788888777777 566554 8777
Q ss_pred eCC---eE-EEcCCcEEEeeEEEecCCCC
Q psy10545 471 TPT---SI-RINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 471 ~~~---~v-~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.. .| ++.+|.+++++.||.|+|.+
T Consensus 97 ~~~~~~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 97 SLHGPLKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp ECSSSSEEEEETTSCEEEEEEEEECCCEE
T ss_pred EeCCcEEEEEeCCCCEEEeCEEEECCCCC
Confidence 652 26 67788899999999999965
No 292
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.58 E-value=0.0013 Score=79.61 Aligned_cols=58 Identities=10% Similarity=-0.066 Sum_probs=47.0
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecc---eEEEEeC--Ce---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNK---TVEIITP--TS---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~---~v~~i~~--~~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
..++...+.+.|.+.+++.| .++.++ +|++|.. +. |++.+|.+++|+.||.|+|..|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 34566788889999998888 688888 9999863 22 66778878999999999999875
No 293
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.55 E-value=0.0013 Score=81.72 Aligned_cols=36 Identities=33% Similarity=0.468 Sum_probs=33.0
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
..||+||||||.||+.+|.||++. ++.+|+|||+++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 469999999999999999999875 678999999987
No 294
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.54 E-value=0.0021 Score=73.90 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=74.5
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
..+++|+|+|++|+.+|..|+++|++|+|+|+. + |+-+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~----------------gg~~------------------------ 52 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P----------------GGQL------------------------ 52 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T----------------TGGG------------------------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C----------------CCee------------------------
Confidence 458899999999999999999999999999987 3 1100
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEE
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEI 469 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~ 469 (1428)
... .....++. ...+....+.+.+.+.+.+.+ .++. ++|++
T Consensus 53 --------~~~---------------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 53 --------TEA---------------------GIVDDYLG--------LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp --------GGC---------------------CEECCSTT--------STTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred --------ccc---------------------ccccccCC--------CCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 000 00000010 001566788888888888777 4555 88888
Q ss_pred EeCCe----EEEcCCcEEEeeEEEecCCCC
Q psy10545 470 ITPTS----IRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 470 i~~~~----v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+..+. |++.+|.++.++.||.|.|..
T Consensus 95 i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 95 IENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp EEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred EEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 87542 677777899999999999976
No 295
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.53 E-value=0.0025 Score=79.05 Aligned_cols=128 Identities=16% Similarity=0.219 Sum_probs=81.0
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELS 390 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~ 390 (1428)
+.+++|+|+|+.|+.+|..|++.|++|+|||+.+.. ||.+.. ...|+.+.
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~-----------------GGtw~~-------~~ypg~~~------ 70 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV-----------------GGVWYW-------NRYPGARC------ 70 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS-----------------CTHHHH-------CCCTTCBC------
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC-----------------CCcccc-------CCCCCcee------
Confidence 357899999999999999999999999999998755 122111 11222110
Q ss_pred CCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCc-ccccccceeeechHHHHHHHHHhccCC---eEEecce
Q psy10545 391 SSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFN-RKIFSGYYSICSKHLNSYLIRALGINN---FLFNNKT 466 (1428)
Q Consensus 391 s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~~~---~~~~~~~ 466 (1428)
+++... ....|...- ...........+.++.+.+.+.+.+.+ .++.+++
T Consensus 71 -------------dv~s~~--------------y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~ 123 (549)
T 4ap3_A 71 -------------DVESID--------------YSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTR 123 (549)
T ss_dssp -------------SSCTTT--------------SSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCC
T ss_pred -------------CCCchh--------------cccccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCE
Confidence 110000 000000000 000001123567788888888887765 4778899
Q ss_pred EEEEe--CC----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 467 VEIIT--PT----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 467 v~~i~--~~----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
|+++. .+ .|++.+|.+++++.||.|+|..
T Consensus 124 V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 124 VTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp EEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred EEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 98885 23 3788889899999999999975
No 296
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.52 E-value=0.0016 Score=78.59 Aligned_cols=42 Identities=29% Similarity=0.334 Sum_probs=36.4
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
||++|||||+||+++|++|++.+ .+|+|||+++..+.+++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G--~~V~vlE~~~~~GG~~~t~ 43 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAG--KKVLLLEGGERLGGRAYSR 43 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSSSBTTCCEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcC--CeEEEEecCCCccCeecce
Confidence 79999999999999999999974 7999999987775556543
No 297
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.50 E-value=0.0009 Score=82.99 Aligned_cols=58 Identities=19% Similarity=0.112 Sum_probs=44.0
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCC---eEEEEEec--CCcE--E---EcCEEEEcCCHHHHHHHhcCC
Q psy10545 939 KLFQNLGGNLILNSQVISIYVNNN---KVNKVHLK--NGQI--F---DADIIVSNADIINTYRNLLGQ 996 (1428)
Q Consensus 939 ~~l~~~G~~V~~~~~V~~I~~~~~---~v~~V~~~--~G~~--i---~ad~VV~A~~~~~~~~~Ll~~ 996 (1428)
+.+++.|++|++++.|++|..+++ ++++|++. +|+. + .++.||+|++.......|+..
T Consensus 202 ~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~S 269 (536)
T 1ju2_A 202 NKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLS 269 (536)
T ss_dssp GGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred hhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHc
Confidence 334567899999999999999863 78999874 5653 4 568999999988766644433
No 298
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.50 E-value=0.0033 Score=77.73 Aligned_cols=123 Identities=17% Similarity=0.135 Sum_probs=82.8
Q ss_pred CChhhHhhhccCCCCh---------HHHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCc
Q psy10545 294 LPDKIIRNFYANKLSF---------FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQ 364 (1428)
Q Consensus 294 ~~~~~~~~Fl~~~~~~---------~~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~ 364 (1428)
.|.+.+..++...... ..+|++|+|+||+|+.+|..|++.|++|+|+|++...
T Consensus 186 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG------------------ 247 (521)
T 1hyu_A 186 MTLTEIVAKVDTGAEKRAAEALNKRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGG------------------ 247 (521)
T ss_dssp CCHHHHHHHHCCSSCCHHHHHHHTSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTG------------------
T ss_pred CCHHHHHHHHhhcccccccccccccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCC------------------
Confidence 4556667776654220 1246899999999999999999999999999864211
Q ss_pred chhHHHHHHHHHhcCCCceEEEeecCCCCCCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeec
Q psy10545 365 GLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICS 444 (1428)
Q Consensus 365 Gl~~~~~~~~~~~~~~~~rv~~l~~~s~~~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r 444 (1428)
.+.. .. .+ . . +.. ....++
T Consensus 248 -~~~~---------~~-----------------------~~--------~-----~-------~~~--------~~~~~~ 266 (521)
T 1hyu_A 248 -QVLD---------TV-----------------------DI--------E-----N-------YIS--------VPKTEG 266 (521)
T ss_dssp -GGTT---------CS-----------------------CB--------C-----C-------BTT--------BSSBCH
T ss_pred -cccc---------cc-----------------------cc--------c-----c-------cCC--------CCCCCH
Confidence 1000 00 00 0 0 000 001345
Q ss_pred hHHHHHHHHHhccCC-eEEecceEEEEeCC-------eEEEcCCcEEEeeEEEecCCCC
Q psy10545 445 KHLNSYLIRALGINN-FLFNNKTVEIITPT-------SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 445 ~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~-------~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
..+.+.+.+.+.+.| .++.+++|+.+..+ .|++.+|.+++++.||.|+|..
T Consensus 267 ~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 267 QKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 677788888887778 57778899998632 2777888899999999999965
No 299
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=96.48 E-value=0.0017 Score=78.14 Aligned_cols=46 Identities=24% Similarity=0.169 Sum_probs=38.0
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
...+|++|||||+|||++|++|.+.++ .+|+|+|+++..+.+++++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~-~~v~v~E~~~~~GG~~~t~ 49 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGF-HDYTILERTDHVGGKCHSP 49 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEECSSSCSSTTCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCC-CcEEEEECCCCCCCccccc
Confidence 356899999999999999999999642 7999999998885455443
No 300
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.48 E-value=0.0012 Score=82.33 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=52.6
Q ss_pred HHHHHHHHH-cCcEEEeCceeeEEEEeCCeEEEEEecC---Cc--EE---EcCEEEEcCCHHHHHHHhcCCCCCChhHHH
Q psy10545 935 KALIKLFQN-LGGNLILNSQVISIYVNNNKVNKVHLKN---GQ--IF---DADIIVSNADIINTYRNLLGQYAFGKKKYM 1005 (1428)
Q Consensus 935 ~~L~~~l~~-~G~~V~~~~~V~~I~~~~~~v~~V~~~~---G~--~i---~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~ 1005 (1428)
.++.+.+.+ .|++|++++.|++|..+++++++|++.+ |+ ++ .++.||+|++.......|+.....|+..++
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~ 278 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQ 278 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHH
Confidence 334444554 4899999999999999999999999865 64 33 789999999998766655444444554444
Q ss_pred HH
Q psy10545 1006 NL 1007 (1428)
Q Consensus 1006 ~l 1007 (1428)
.+
T Consensus 279 ~~ 280 (546)
T 1kdg_A 279 TV 280 (546)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 301
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.48 E-value=0.0022 Score=78.61 Aligned_cols=45 Identities=22% Similarity=0.459 Sum_probs=38.6
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
.+|++|||||++||++|++|.+.+++.+|+|+|++...+.+..++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~ 48 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATY 48 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEE
Confidence 589999999999999999999988779999999987774444444
No 302
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.48 E-value=0.005 Score=70.48 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=42.0
Q ss_pred eechHHHHHHHHHhccCC-eEEecceEEEEeCC-------eEEEcCCcEEEeeEEEecCCCC
Q psy10545 442 ICSKHLNSYLIRALGINN-FLFNNKTVEIITPT-------SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 442 i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~-------~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.++..+.+.+.+.+.+.+ .++.+++|+.+..+ .|++.+|.+++++.||.|+|..
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 355677788888887777 57778899988642 2677788889999999999965
No 303
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.47 E-value=0.0019 Score=80.07 Aligned_cols=46 Identities=24% Similarity=0.398 Sum_probs=39.6
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEec
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQ 54 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w~ 54 (1428)
..+|++|||||+|||++|++|.+.+ .+|+|+|+++..+.+++++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~GGr~~t~~~ 48 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSG--LNVVVLEARDRVGGRTYTLRN 48 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSSSBTTCCEECC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCceeeccc
Confidence 4689999999999999999999964 799999999888667776654
No 304
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.46 E-value=0.0012 Score=80.89 Aligned_cols=55 Identities=16% Similarity=0.270 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|.+++ .++.+|.||+|++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~~-~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVETDK-GTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEETT-EEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEECC-CEEEcCEEEECcCCC
Confidence 567788889999999999999999999865 5556677654 489999999999754
No 305
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.46 E-value=0.0018 Score=76.12 Aligned_cols=183 Identities=15% Similarity=0.162 Sum_probs=94.4
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeCCeEEEcCCcEEEeeEEEecCCCCCCCCC----cceEEEEEEEEEec
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITPTSIRINNKKIINANCIIDGRGLKNSQFD----GIYQIFLGQQWNLS 514 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~~v~l~~g~~~~a~lvI~AdG~~S~~~~----~~~q~~~g~~~~~~ 514 (1428)
+.++...+.+.|.+++.+.| .++. ++|+++..+ .+ +|+.||.|+|..|..+. ...+..-|.-+.++
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-------~~-~a~~VV~A~G~~s~~l~~~~~~~~~p~rg~~~~~~ 207 (363)
T 1c0p_A 137 LSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-------FD-GADLVVNATGLGAKSIAGIDDQAAEPIRGQTVLVK 207 (363)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-------CS-SCSEEEECCGGGGGTSBTTCCTTEEEEEEEEEEEE
T ss_pred ceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-------Cc-CCCEEEECCCcchhhccCcccCCccccCCeEEEEe
Confidence 45778899999999998888 5655 777777543 12 79999999999876321 12233334333343
Q ss_pred CCcCCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEeccC-C-CCCHHHHHHHHHHHHHH-cC-C------ccce
Q psy10545 515 SPHGLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKK-P-FLKIDMLKKSIKDYAIK-NR-W------KLKN 584 (1428)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~~~-~-~~~~~~~~~~l~~~~~~-~~-~------~~~~ 584 (1428)
.+.. ... +... .. .. . .|+.|..++.+.++.+..... . ..+.+.. +.+.+.+.+ ++ + .-.+
T Consensus 208 ~~~~--~~~-~~~~--~~-~~-~-~y~~p~~~g~~~iG~t~~~~~~~~~~~~~~~-~~l~~~~~~~~P~l~~~~~~~~~~ 278 (363)
T 1c0p_A 208 SPCK--RCT-MDSS--DP-AS-P-AYIIPRPGGEVICGGTYGVGDWDLSVNPETV-QRILKHCLRLDPTISSDGTIEGIE 278 (363)
T ss_dssp CCCC--CCE-EECS--CT-TC-C-EEEEEETTTEEEEECCCEETCCCCSCCHHHH-HHHHHHHHHHCGGGSSSSSGGGCE
T ss_pred CCcc--cce-Eeec--cC-CC-c-EEEEEcCCCEEEEEeeeccCCCCCCCCHHHH-HHHHHHHHHhCccccCCcccccce
Confidence 3321 111 1110 01 11 1 677888777888876543222 1 1122222 233333322 22 1 1124
Q ss_pred eeeeeeeeecccCCchhhh--h---------c--cCcccccccccc-----cc--cCCCCChHHHHHHHHHHHhhc
Q psy10545 585 IEREEIGSIPIALKNEKII--K---------F--KKTICVGLRANL-----LH--ATTGYSLPIAIQLAENIAKYS 640 (1428)
Q Consensus 585 ~~~~~~~~~Pl~~~~~~~~--~---------~--~rv~lvGdAA~~-----vh--P~~G~G~~~a~~la~~l~~~~ 640 (1428)
+.+.-.+..|+........ . . +...++|+..+. ++ -..|.||..+...++.+++.+
T Consensus 279 i~~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li 354 (363)
T 1c0p_A 279 VLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLV 354 (363)
T ss_dssp EEEEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHH
T ss_pred EeeceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHHHHHHHH
Confidence 4444456666543211100 0 0 122345554432 22 345677888878888777654
No 306
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.46 E-value=0.0012 Score=81.02 Aligned_cols=55 Identities=20% Similarity=0.286 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|.. ++++..|.+ +|+++.+|.||+|++..
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCC
Confidence 56778888999999999999999999985 555455666 67899999999999653
No 307
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.42 E-value=0.0024 Score=78.26 Aligned_cols=45 Identities=20% Similarity=0.273 Sum_probs=37.6
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
+|++|||||+|||++|++|++.+.+.+|+|+|+++..+.++.++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~ 47 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVR 47 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEe
Confidence 699999999999999999999764449999999987755565543
No 308
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.41 E-value=0.0019 Score=80.38 Aligned_cols=38 Identities=26% Similarity=0.508 Sum_probs=33.9
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
..+||+||||||.||+.+|.||++. ++.+|+|||+++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence 3569999999999999999999986 5689999999875
No 309
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.39 E-value=0.011 Score=72.06 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=32.5
Q ss_pred HHHHHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCC
Q psy10545 311 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKL 346 (1428)
Q Consensus 311 ~~~~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~ 346 (1428)
++|++|+|+|++|+.+|..|++.|++|+|||+.+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 357899999999999999999999999999988654
No 310
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.39 E-value=0.0028 Score=74.12 Aligned_cols=46 Identities=24% Similarity=0.336 Sum_probs=38.9
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccC-CCCCCceeEEe
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS-SSVKNHIWSFH 53 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~-~~~~~~tw~~w 53 (1428)
...+|++|||||+|||++|++|.+.+ .+|+|+|++ ...+.+.+++-
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G--~~V~VlE~~~~~vGGr~~t~~ 88 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAG--HDVTILEANANRVGGRIKTFH 88 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTS--CEEEEECSCSSCCBTTCCEEC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCC--CcEEEEeccccccCCceeeec
Confidence 34689999999999999999999974 799999999 66665666664
No 311
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.39 E-value=0.0027 Score=73.06 Aligned_cols=44 Identities=25% Similarity=0.352 Sum_probs=35.5
Q ss_pred HcCcEEEeCceeeEEEEeCCeEEEEEec---CCc--EEEcCEEEEcCCH
Q psy10545 943 NLGGNLILNSQVISIYVNNNKVNKVHLK---NGQ--IFDADIIVSNADI 986 (1428)
Q Consensus 943 ~~G~~V~~~~~V~~I~~~~~~v~~V~~~---~G~--~i~ad~VV~A~~~ 986 (1428)
+.|++|+++++|++|..+++++.+|++. +|+ ++.+|.||++++.
T Consensus 202 ~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred cCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 4589999999999998776656677764 675 6899999999864
No 312
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=96.38 E-value=0.0021 Score=75.80 Aligned_cols=45 Identities=20% Similarity=0.403 Sum_probs=36.9
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
...+|++|||||+|||++|++|++. +++|+|+|+++..+.+.++.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS--GQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSSGGGCCE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC--CCceEEEeccCCCCCcccee
Confidence 3468999999999999999999986 47999999988774333333
No 313
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=96.37 E-value=0.0031 Score=77.45 Aligned_cols=46 Identities=17% Similarity=0.302 Sum_probs=39.2
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
...+|++|||||+|||++|++|.+.+ .+|+|+|+++..+.++|++-
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~GG~~~~~~ 54 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAG--YKVTVLEARTRPGGRVWTAR 54 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTCCEEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeccCCCCCceeeec
Confidence 34689999999999999999999864 79999999988866676654
No 314
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.37 E-value=0.0015 Score=79.39 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=32.9
Q ss_pred ceeeecCCCcchHHHHHHHHhC--CCeEEEEccCCCCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTA--GISTIILEQRDKPG 747 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~--G~~V~VlEa~~~~G 747 (1428)
+||+|||||++|++||..|++. |++|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 99999999987654
No 315
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.36 E-value=0.0026 Score=73.14 Aligned_cols=53 Identities=8% Similarity=0.069 Sum_probs=38.5
Q ss_pred eechHHHHHHHHHhccCC-eEEecceEEEEeCCe--EE-EcCCcEEEeeEEEecCCCC
Q psy10545 442 ICSKHLNSYLIRALGINN-FLFNNKTVEIITPTS--IR-INNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 442 i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~~--v~-l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+..+.+.+.+.+.+.+ .++.+ +|+.+.... ++ +.+|.++.++.||.|+|..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCC
Confidence 455677777777777777 45555 488886432 33 5678889999999999966
No 316
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.34 E-value=0.0015 Score=78.17 Aligned_cols=52 Identities=19% Similarity=0.316 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.+++.|++|+++++|++|. ++ .|++.+|+++.+|.||++++..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCC
Confidence 5677888889999999999999999998 44 5778899999999999999653
No 317
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.32 E-value=0.003 Score=76.12 Aligned_cols=46 Identities=20% Similarity=0.258 Sum_probs=39.1
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
|..++|++|||+|++|+++|++|++.+ ++|+++|++...+.+++++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g--~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNG--KKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTTSCEE
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCC--CcEEEEecCCCcccccccc
Confidence 456799999999999999999999964 7999999998885555554
No 318
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.30 E-value=0.0018 Score=79.48 Aligned_cols=56 Identities=23% Similarity=0.269 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCHH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADII 987 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~~ 987 (1428)
..+.+.+.+.++++|++|++++.|++|..++++ +.|++.+|+++.||.||++++..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~-~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGK-LLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCe-EEEEECCCCEEECCEEEECCCCC
Confidence 457778888899999999999999999887776 47888999999999999999753
No 319
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.27 E-value=0.017 Score=70.23 Aligned_cols=47 Identities=23% Similarity=0.377 Sum_probs=36.9
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCCeEEEEEec-CC--cEEEcCEEEEcCCH
Q psy10545 939 KLFQNLGGNLILNSQVISIYVNNNKVNKVHLK-NG--QIFDADIIVSNADI 986 (1428)
Q Consensus 939 ~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~-~G--~~i~ad~VV~A~~~ 986 (1428)
+.+++.|++|+++++|++|..++++ +.|.+. +| +++.+|.||++++.
T Consensus 220 ~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 220 KQFKKLGVTILTATKVESIADGGSQ-VTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHTCEEECSCEEEEEEECSSC-EEEEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHcCCEEEeCcEEEEEEEcCCe-EEEEEEcCCceEEEEcCEEEECCCC
Confidence 4455679999999999999877665 445554 66 67999999999964
No 320
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.27 E-value=0.002 Score=77.83 Aligned_cols=35 Identities=23% Similarity=0.454 Sum_probs=32.8
Q ss_pred cceeeecCCCcchHHHHHHHHh---CCCeEEEEccCCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQT---AGISTIILEQRDK 745 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~---~G~~V~VlEa~~~ 745 (1428)
++||+|||||++|++||..|++ .|++|+|+|+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 5799999999999999999999 8999999999874
No 321
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.26 E-value=0.0017 Score=80.61 Aligned_cols=37 Identities=32% Similarity=0.543 Sum_probs=33.6
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+||+||||+|.||+.+|.||++. ++.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCCcc
Confidence 59999999999999999999984 67999999998755
No 322
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.25 E-value=0.0019 Score=80.34 Aligned_cols=61 Identities=11% Similarity=0.116 Sum_probs=47.0
Q ss_pred HcCcEEEeCceeeEEEEe--CCeEEEEEec--CCc--EEEc-CEEEEcCCHHHHHHHhcCCCCCChhH
Q psy10545 943 NLGGNLILNSQVISIYVN--NNKVNKVHLK--NGQ--IFDA-DIIVSNADIINTYRNLLGQYAFGKKK 1003 (1428)
Q Consensus 943 ~~G~~V~~~~~V~~I~~~--~~~v~~V~~~--~G~--~i~a-d~VV~A~~~~~~~~~Ll~~~~~p~~~ 1003 (1428)
+.|.+|++++.|++|..+ ++++++|++. +|+ ++.| +.||++++...+.+.|+-....|+..
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~ 285 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRE 285 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHH
Confidence 458999999999999999 7899999875 364 4667 56999999988877665544445443
No 323
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.25 E-value=0.0029 Score=77.42 Aligned_cols=46 Identities=22% Similarity=0.062 Sum_probs=37.5
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeE
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWS 51 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~ 51 (1428)
+...+|++|||||++||++|++|.+.+ ..+|+|+|+++..+.+.++
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~g-~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTELG-YKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESSSSSSGGGCE
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEeCCCCCCCeeee
Confidence 445789999999999999999999975 3689999999887544444
No 324
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.23 E-value=0.0017 Score=79.15 Aligned_cols=37 Identities=30% Similarity=0.372 Sum_probs=33.4
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+||++|||||+||+++|.+|++. +++|+|||+++..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~--G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA--KYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCC
Confidence 479999999999999999999986 4799999988766
No 325
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.22 E-value=0.0023 Score=74.93 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=31.8
Q ss_pred ccEEEECccHHHHHHHHHHhccC----CCCeEEEEccCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYN----PKLNVLLLELSS 43 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~----~~~~v~~~~~~~ 43 (1428)
.|++|||||.+|+++|++|++++ |+.+|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 39999999999999999999986 668999999875
No 326
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.21 E-value=0.0031 Score=75.68 Aligned_cols=40 Identities=23% Similarity=0.226 Sum_probs=35.6
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
...+|++|||||+||+++|.+|.+.+++.+|+|||+++..
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 4578999999999999999999998877789999998654
No 327
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=96.21 E-value=0.0032 Score=74.04 Aligned_cols=43 Identities=26% Similarity=0.557 Sum_probs=36.2
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
++|++|||||+||+++|++|++. +.+|+|+|+++..+.++.++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~GG~~~~~ 43 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNHIGGNAYTE 43 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSSSSGGGCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCCCCcceEee
Confidence 37999999999999999999997 47999999998775445444
No 328
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.20 E-value=0.0034 Score=75.53 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=36.4
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
+|++|||||++||++|++|++.+ .+|+|+|+++..+.++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~~~GG~~~~~~ 43 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG--HEVEVFERLPITGGRFTNLS 43 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSSSSBTTSSEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CceEEEeCCCCCCCceeeec
Confidence 49999999999999999999974 89999999987754555543
No 329
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.18 E-value=0.0038 Score=73.44 Aligned_cols=54 Identities=20% Similarity=0.233 Sum_probs=41.3
Q ss_pred eeechHHHHHHHHHhccCC-eEEecceEEEEeCC--e--EEEcCCcEEEeeEEEecCCCC
Q psy10545 441 SICSKHLNSYLIRALGINN-FLFNNKTVEIITPT--S--IRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 441 ~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~--v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.+.+..+.+.+.+.+.+.| .++.+++|+++..+ . |++.+| ++.++.||.|.|..
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 3566778888888877777 67778899888743 2 566555 69999999999977
No 330
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.17 E-value=0.0023 Score=75.36 Aligned_cols=50 Identities=16% Similarity=0.326 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 931 GALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 931 ~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
..+.+.+.+.+++.|++|+++++|++|. .+ +|++++|+ +.+|.||+|++.
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCC
Confidence 4677788888999999999999999997 22 47788887 999999999864
No 331
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=96.17 E-value=0.0029 Score=76.91 Aligned_cols=44 Identities=25% Similarity=0.327 Sum_probs=37.1
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
.++|++|||||+|||++|++|.+. +.+|+|+|++...+.+++++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~GG~~~~~ 47 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRVGGRTWTD 47 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTTCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCCCCceecc
Confidence 468999999999999999999986 47899999998775455443
No 332
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.17 E-value=0.0032 Score=75.81 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=40.8
Q ss_pred hHHHHHHHHHhccCC-eEEecceEEEEeC-C-e----EEEcCCcEEEeeEEEecCCCC
Q psy10545 445 KHLNSYLIRALGINN-FLFNNKTVEIITP-T-S----IRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 445 ~~l~~~L~~~~~~~~-~~~~~~~v~~i~~-~-~----v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
..+-++|.+.+++.| .++.+++|+.|.. + + |++.+|++++|+.||.+.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 467888999888887 7889999998864 2 2 678888899999999988765
No 333
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=96.16 E-value=0.0035 Score=76.74 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=37.6
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
..+|++|||||++||++|++|.+.+ .+|+|+|++...+.+++++-
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g--~~v~v~E~~~~~GGr~~t~~ 59 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRG--TDAVLLESSARLGGAVGTHA 59 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTT--CCEEEECSSSSSBTTCCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEEcCCCCCceeeeec
Confidence 4689999999999999999999864 79999999988865666654
No 334
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.12 E-value=0.0029 Score=78.00 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=31.8
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
.+|||||||++||++|++|++.+ .+|+|+|+++..+.++++|
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G--~~V~VlEa~~~~GG~~~t~ 43 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAG--IPVLLLEQRDKPGGRAYVY 43 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--CCEEEECCC-------CEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--CcEEEEccCCCCCCcEEEE
Confidence 68999999999999999999975 7999999998885566655
No 335
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.06 E-value=0.0044 Score=76.48 Aligned_cols=45 Identities=27% Similarity=0.268 Sum_probs=37.8
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
..+|++|||||++||++|++|.+.+ .+|+|+|+++..+.+.+++.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~GG~~~~~~ 56 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHG--LNVTVFEAEGKAGGKLRSVS 56 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTS--CEEEEECSSSSSCSSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEEeCCCCCCceeeec
Confidence 3589999999999999999999864 79999999988855565554
No 336
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.05 E-value=0.0039 Score=73.93 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=33.0
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
.++|++|||||+||+++|.+|.+.+++.+|+++|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 4689999999999999999999988778899999764
No 337
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.00 E-value=0.0048 Score=74.17 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhccCC-eEEecceEEEEeCC--eEEEcCCcEEEeeEEEecCCCC
Q psy10545 445 KHLNSYLIRALGINN-FLFNNKTVEIITPT--SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 445 ~~l~~~L~~~~~~~~-~~~~~~~v~~i~~~--~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
..+-+.|.+.+.+.| .++.+++|++|..+ .+...+|++++||.||-|-|..
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHH
Confidence 345677888887777 78889999998743 3534578889999999888764
No 338
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=95.98 E-value=0.0051 Score=74.82 Aligned_cols=56 Identities=9% Similarity=0.029 Sum_probs=42.6
Q ss_pred eeechHHHHHHHHHhccCC-e--EEecceEEEEeC--C----eEEEcC---C--cEEEeeEEEecCCCCC
Q psy10545 441 SICSKHLNSYLIRALGINN-F--LFNNKTVEIITP--T----SIRINN---K--KIINANCIIDGRGLKN 496 (1428)
Q Consensus 441 ~i~r~~l~~~L~~~~~~~~-~--~~~~~~v~~i~~--~----~v~l~~---g--~~~~a~lvI~AdG~~S 496 (1428)
.+++..+.+.|.+.+.+.+ . ++.+++|+.+.. + .|++.+ | .++.+|.||.|+|..|
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 4678888888988887766 3 778899998862 3 366654 4 5789999999999763
No 339
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=95.98 E-value=0.0043 Score=72.27 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=31.8
Q ss_pred ccEEEECccHHHHHHHHHHhc-cCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQ-YNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~-~~~~~~v~~~~~~~~~ 45 (1428)
+|++|||||++|+++|+.|++ ...+.+|+|+|+++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 699999999999999999998 2245899999988655
No 340
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.96 E-value=0.0047 Score=75.98 Aligned_cols=43 Identities=30% Similarity=0.533 Sum_probs=38.0
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
+|++|||||+|||++|++|.+.+ .+|+|+|+++..+.++|++-
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g--~~v~v~E~~~~~GGr~~t~~ 82 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAG--FKTLLLEARDRIGGRSWSSN 82 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSBSBTTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcceecc
Confidence 89999999999999999999964 79999999988866777654
No 341
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.96 E-value=0.0045 Score=76.73 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=32.9
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..++|++|||+|+|||++|++|++ + .+|+|||+.+..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G--~~V~vlEk~~~~ 42 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-Q--HQVIVLSKGPVT 42 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-T--SCEEEECSSCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-C--CcEEEEECCCCC
Confidence 346899999999999999999998 4 799999998765
No 342
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=95.95 E-value=0.0051 Score=75.99 Aligned_cols=38 Identities=32% Similarity=0.486 Sum_probs=33.0
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
|..+||++|||||+||+++|.+|++. +++|+|||+++.
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~--G~~V~liEk~~~ 66 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY--GKKVMVLDFVTP 66 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccCc
Confidence 34469999999999999999999996 479999998753
No 343
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.94 E-value=0.003 Score=78.25 Aligned_cols=36 Identities=31% Similarity=0.434 Sum_probs=32.3
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+||+||||+|.||+.+|.+|++ +.+|+|||.++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc---CCcEEEEecCCCc
Confidence 46999999999999999999999 4799999998643
No 344
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.91 E-value=0.0034 Score=78.82 Aligned_cols=39 Identities=23% Similarity=0.252 Sum_probs=34.9
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.++|++|||+|+|||++|+.|++.+++++|+|||+.+..
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 468999999999999999999998766899999998654
No 345
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.86 E-value=0.0048 Score=75.82 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=32.1
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+||++|||||+||+++|.+|++.+ .+|+|||+++..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~ 60 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLG--MKVAVVEKRSTY 60 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCC
Confidence 4699999999999999999999964 799999988766
No 346
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.82 E-value=0.0043 Score=77.63 Aligned_cols=62 Identities=11% Similarity=-0.081 Sum_probs=45.6
Q ss_pred HHHcCcEEEeCceeeEEEEeC----CeEEEEEec--CCc--EEEc-CEEEEcCCHHHHHHHhcCCCCCChh
Q psy10545 941 FQNLGGNLILNSQVISIYVNN----NKVNKVHLK--NGQ--IFDA-DIIVSNADIINTYRNLLGQYAFGKK 1002 (1428)
Q Consensus 941 l~~~G~~V~~~~~V~~I~~~~----~~v~~V~~~--~G~--~i~a-d~VV~A~~~~~~~~~Ll~~~~~p~~ 1002 (1428)
..+.|++|++++.|++|..++ +++++|+.. +|+ ++.| +.||+|++...+.+.|+.....|..
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~ 311 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKS 311 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHH
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHH
Confidence 345689999999999999874 478898874 564 5678 8999999987766655544333443
No 347
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.82 E-value=0.0048 Score=75.73 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=34.1
Q ss_pred cccEEEECccHHHHHHHHHHhccC-CCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYN-PKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~-~~~~v~~~~~~~~~ 45 (1428)
.+|++|||||+||+++|.+|++.+ ++.+|+|||+++..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 489999999999999999999976 67999999988644
No 348
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.81 E-value=0.005 Score=77.75 Aligned_cols=42 Identities=21% Similarity=0.400 Sum_probs=34.8
Q ss_pred cccEEEECccHHHHHHHHHHhcc----CCCCeEEEEccCCCCCCce
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQY----NPKLNVLLLELSSSVKNHI 49 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~----~~~~~v~~~~~~~~~~~~t 49 (1428)
++||+|||+|+|||++|+.|++. +|+++|+|||+......++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s 67 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGA 67 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCST
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcc
Confidence 58999999999999999999986 2468999999986543334
No 349
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.79 E-value=0.0042 Score=76.67 Aligned_cols=38 Identities=24% Similarity=0.286 Sum_probs=34.0
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..++||+|||+|+|||++|++|++.+ .+|+|||+.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G--~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAG--ADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCC
Confidence 34689999999999999999999964 799999999776
No 350
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.77 E-value=0.0066 Score=75.13 Aligned_cols=42 Identities=19% Similarity=0.212 Sum_probs=35.8
Q ss_pred CCCCCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 2 NFEKNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 2 ~~~~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
...+..++|++|||||+||+++|++|++. +.+|+|||+++..
T Consensus 37 ~~~~~~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~ 78 (523)
T 1mo9_A 37 DENDPREYDAIFIGGGAAGRFGSAYLRAM--GGRQLIVDRWPFL 78 (523)
T ss_dssp CTTCCSCBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS
T ss_pred CCCCCCcCCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCC
Confidence 34455679999999999999999999986 4799999998655
No 351
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.73 E-value=0.0041 Score=77.86 Aligned_cols=37 Identities=24% Similarity=0.167 Sum_probs=32.9
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.++|++|||+|+|||++|+.|++.+ .+|+|||+.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G--~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSG--QTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCC--CcEEEEecCCCC
Confidence 3689999999999999999999864 799999998655
No 352
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.72 E-value=0.007 Score=72.89 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=33.4
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
.+|++|||||+||+++|.+|.+.+.+.+|+|||+++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 5899999999999999999999876679999998754
No 353
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.69 E-value=0.0056 Score=74.86 Aligned_cols=37 Identities=30% Similarity=0.293 Sum_probs=33.2
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+||++|||||+||+++|++|++.+ ++|+|||+++..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLG--LKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHT--CCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC--CEEEEEeCCCcc
Confidence 4699999999999999999999974 799999998754
No 354
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.67 E-value=0.0053 Score=75.53 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcC-cEEEeCceeeEEEEeC-C-eEEEEEec--CC-----cEEEcCEEEEcCCHHHHHHHhc
Q psy10545 934 IKALIKLFQNLG-GNLILNSQVISIYVNN-N-KVNKVHLK--NG-----QIFDADIIVSNADIINTYRNLL 994 (1428)
Q Consensus 934 ~~~L~~~l~~~G-~~V~~~~~V~~I~~~~-~-~v~~V~~~--~G-----~~i~ad~VV~A~~~~~~~~~Ll 994 (1428)
..++.+.+.++| ++|++++.|++|..++ + ++++|++. +| .++.|+.||+|++...+.+.|+
T Consensus 229 ~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~ 299 (507)
T 1coy_A 229 DKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLV 299 (507)
T ss_dssp TTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHH
Confidence 334444455555 9999999999999986 4 78999874 56 3688999999999887766443
No 355
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.67 E-value=0.0068 Score=72.44 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=34.2
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
...+|++|||||+||+++|.+|.+.+++.+|+|||+++.
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 356899999999999999999999887678999998754
No 356
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.63 E-value=0.0089 Score=74.23 Aligned_cols=53 Identities=30% Similarity=0.235 Sum_probs=42.7
Q ss_pred CCCCCCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEecc
Q psy10545 1 MNFEKNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQT 55 (1428)
Q Consensus 1 ~~~~~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w~~ 55 (1428)
|+-.|.++||++|||.|+.|..+|..|++. +++|++||+++.++...+||=-+
T Consensus 1 m~~~~~~~~D~~i~GtGl~~~~~a~~~~~~--g~~vl~id~~~~~gg~~~~~~l~ 53 (650)
T 1vg0_A 1 MADNLPSDFDVIVIGTGLPESIIAAACSRS--GQRVLHVDSRSYYGGNWASFSFS 53 (650)
T ss_dssp --CCCCSBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCGGGCEECHH
T ss_pred CCccCCCcCCEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCCcccCccccccHH
Confidence 555677789999999999999999999996 58999999999985445666433
No 357
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.59 E-value=0.0052 Score=73.30 Aligned_cols=49 Identities=12% Similarity=-0.043 Sum_probs=40.5
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCCcEEEcCEEEEcCCH
Q psy10545 937 LIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNGQIFDADIIVSNADI 986 (1428)
Q Consensus 937 L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G~~i~ad~VV~A~~~ 986 (1428)
+.+.+++.|++|++++.|+.+..+++. ..|++.+|+++.+|.||++.|.
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~~~-~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDTEA-MTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEETTT-TEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEeCceEEEEEecccc-eEEEcCCCcEEEeeEEEEecCc
Confidence 334456789999999999999887765 5688999999999999998753
No 358
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.59 E-value=0.0064 Score=74.48 Aligned_cols=39 Identities=18% Similarity=0.263 Sum_probs=34.1
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
|+.+||++|||||+||+++|.+|++. +.+|+|||+++..
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~~ 41 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADE--GLKVAIVERYKTL 41 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSCS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 45579999999999999999999986 4799999987655
No 359
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.55 E-value=0.0072 Score=74.02 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=37.9
Q ss_pred HHHHHHHHhccCC-eEEecceEEEEeCC----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 447 LNSYLIRALGINN-FLFNNKTVEIITPT----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 447 l~~~L~~~~~~~~-~~~~~~~v~~i~~~----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+.+.+.+++.| .++.+++|+.++.+ .|++.+|+++.+|.||.|.|..
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 3455666666667 67888999998754 2778888899999999999865
No 360
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.53 E-value=0.0082 Score=72.82 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=34.1
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+|++|||||+||+++|.+|.+.+++.+|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999998788999999998754
No 361
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.52 E-value=0.0073 Score=73.50 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=31.2
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS 42 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~ 42 (1428)
.+||++|||||+||+++|.+|++. +++|+|||++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF--GKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC--CCcEEEEcCC
Confidence 469999999999999999999985 5899999987
No 362
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.52 E-value=0.011 Score=72.64 Aligned_cols=46 Identities=20% Similarity=0.271 Sum_probs=38.5
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEe
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFH 53 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w 53 (1428)
...+|++|||||++||++|+.|.+.+ .+|+|+|+++..+.+.+++.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g--~~v~vlE~~~~~gg~~~~~~ 76 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAG--HQVTVLEASERPGGRVRTYR 76 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHT--CEEEEECSSSSSBTTCCEEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCC--CeEEEEECCCCCCCceeeec
Confidence 34689999999999999999999975 79999999988755555543
No 363
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.51 E-value=0.0072 Score=74.36 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=32.9
Q ss_pred cccEEEECccHHHHHHHHHHhccCC-CCeEEEEccCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNP-KLNVLLLELSS 43 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~-~~~v~~~~~~~ 43 (1428)
+||++|||||+||+++|++|++..| +.+|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 5899999999999999999999855 68999999886
No 364
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.51 E-value=0.0076 Score=73.37 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=30.5
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEcc
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLEL 41 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~ 41 (1428)
.+||++|||||+||+++|++|++. +++|+|||+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~--G~~V~liEk 36 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL--GKKVAIAEE 36 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT--TCCEEEEES
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC--CCEEEEEeC
Confidence 369999999999999999999996 479999998
No 365
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.51 E-value=0.0067 Score=74.43 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=31.1
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
+||++|||||+||+++|.+|++. +++|+|||+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~--G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH--TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--CSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCC
Confidence 59999999999999999999986 47999999864
No 366
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.49 E-value=0.0086 Score=72.99 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=32.5
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+.++|++|||||+||+++|.+|++. +.+|+|||++ ..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~-~~ 38 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQ--GAQVTLIERG-TI 38 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESS-ST
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCEEEEEeCC-CC
Confidence 3469999999999999999999986 4799999987 44
No 367
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.0072 Score=73.92 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=31.3
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS 42 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~ 42 (1428)
.+||++|||||+||+++|.+|++. +.+|+|||++
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~--g~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY--GAKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--SCCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC--CCcEEEEeCC
Confidence 479999999999999999999985 5899999987
No 368
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.48 E-value=0.0095 Score=73.04 Aligned_cols=41 Identities=22% Similarity=0.292 Sum_probs=36.0
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+...+|++|||||+||+++|..|.+..++.+|+|||+++..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 44579999999999999999999888778999999988654
No 369
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.47 E-value=0.011 Score=70.01 Aligned_cols=43 Identities=14% Similarity=0.298 Sum_probs=36.2
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
++|++|||||++|+++|++|.+. +.+|+|+|+++..+.+++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~GG~~~~~ 45 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDHIGGNSYDA 45 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSSGGGCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEEecCCcCCccccc
Confidence 47999999999999999999986 47999999998775444443
No 370
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.46 E-value=0.0062 Score=76.96 Aligned_cols=38 Identities=29% Similarity=0.308 Sum_probs=33.4
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..++||+|||+|+|||++|+.|++.+ .+|+|||+.+..
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G--~~V~vlEK~~~~ 40 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKG--LSTIVLSLIPVK 40 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSCGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCC--CcEEEEeccCCC
Confidence 34689999999999999999999864 799999998654
No 371
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.44 E-value=0.0074 Score=73.83 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=30.8
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS 42 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~ 42 (1428)
.+||++|||||+||+++|.+|++. +++|+|||++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~--G~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL--GARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecC
Confidence 469999999999999999999996 4799999965
No 372
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.44 E-value=0.01 Score=71.93 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=34.5
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+|++|||||+||+++|++|.+.+++.+|+|||+++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998788999999998644
No 373
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.43 E-value=0.0078 Score=72.96 Aligned_cols=49 Identities=12% Similarity=0.320 Sum_probs=37.4
Q ss_pred HHHHHHHHhccCC-eEEecceEEEEeCC-----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 447 LNSYLIRALGINN-FLFNNKTVEIITPT-----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 447 l~~~L~~~~~~~~-~~~~~~~v~~i~~~-----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+.+.+.+++.| .++.+++|++++.+ .|++.+|+++.+|.||.|.|..
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 210 ISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 4455666666667 68888899988642 3677888899999999999966
No 374
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.42 E-value=0.015 Score=72.66 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=42.0
Q ss_pred echHHHHHHHHHhccCC-eEEecceEEEEe-CC-e----EEEc--CCc--EEEeeEEEecCCCCCC
Q psy10545 443 CSKHLNSYLIRALGINN-FLFNNKTVEIIT-PT-S----IRIN--NKK--IINANCIIDGRGLKNS 497 (1428)
Q Consensus 443 ~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~-~~-~----v~l~--~g~--~~~a~lvI~AdG~~S~ 497 (1428)
....+.+.|.+++.+.| .++.+++|+++. .+ + |.+. +|+ ++.|+.||.|+|..|.
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 35678899999998888 688899999884 33 2 4444 564 6899999999998754
No 375
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.32 E-value=0.01 Score=72.06 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=33.4
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+|++|||||+||+++|.+|++.+++.+|+|||+++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999998778999999988643
No 376
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.32 E-value=0.0087 Score=73.07 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=32.5
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+|++|||||+||+++|.+|.+.+++.+|+|||+++..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999998788999999998654
No 377
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=95.29 E-value=0.0097 Score=74.07 Aligned_cols=38 Identities=34% Similarity=0.380 Sum_probs=33.0
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..+||+||||+|+||+.+|.+|++. +++|+|||.++..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~--g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA--GKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 3579999999999999999999995 5899999988643
No 378
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.27 E-value=0.011 Score=72.16 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=33.9
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+.+||++|||||+||+++|.+|++.+ .+|+|||+++..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g--~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLG--FKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCc
Confidence 45799999999999999999999874 799999998766
No 379
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.23 E-value=0.0082 Score=72.28 Aligned_cols=54 Identities=22% Similarity=0.177 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCeEEEEEecCC--cEEEcCEEEEcCCH
Q psy10545 930 VGALIKALIKLFQNLGGNLILNSQVISIYVNNNKVNKVHLKNG--QIFDADIIVSNADI 986 (1428)
Q Consensus 930 ~~~l~~~L~~~l~~~G~~V~~~~~V~~I~~~~~~v~~V~~~~G--~~i~ad~VV~A~~~ 986 (1428)
.....+.+.+.++++|+++++|+.|++|+ +++ +.+...+| +++.+|.||++++.
T Consensus 199 ~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~-~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIE--PDK-VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEEC--SSE-EEEECTTSCEEEEECSEEEEECEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCceEEEEe--CCc-eEEEeeCCCceEeecceEEEeccC
Confidence 34555667788899999999999999984 444 33443343 57999999999853
No 380
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.23 E-value=0.0094 Score=73.10 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=31.4
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
.+||++|||||+||+++|.+|++.+ ++|+|||+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G--~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLG--KKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEEecc
Confidence 4799999999999999999999864 7999999754
No 381
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.23 E-value=0.01 Score=73.08 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=31.5
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
+||++|||+||||+.+|.++++.+ ++|+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G--~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHG--ARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTT--CCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecccc
Confidence 699999999999999999999964 89999997653
No 382
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.19 E-value=0.0096 Score=74.66 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=32.6
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.++|++|||+|+|||++|+.|++.+ .+|+|||+....
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G--~~V~vlEK~~~~ 53 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAG--FNTACVTKLFPT 53 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCGG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCC--CcEEEEeccCCC
Confidence 3589999999999999999999864 799999998654
No 383
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.12 E-value=0.012 Score=71.93 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=30.5
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS 42 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~ 42 (1428)
.+||++|||||+||+++|.+|++.+ ++|+|||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G--~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNG--ARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CEEEEEEec
Confidence 4799999999999999999999964 799999953
No 384
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.06 E-value=0.011 Score=72.46 Aligned_cols=48 Identities=10% Similarity=0.214 Sum_probs=36.9
Q ss_pred HHHHHHHhccCC-eEEecceEEEEeCC-----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 448 NSYLIRALGINN-FLFNNKTVEIITPT-----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 448 ~~~L~~~~~~~~-~~~~~~~v~~i~~~-----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.+.+.+.+++.| .++.+++|+.+..+ .|++.+|+++.+|.||-|.|..
T Consensus 238 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 238 REEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 445666666677 68888999988642 2677888899999999998865
No 385
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=95.03 E-value=0.013 Score=73.72 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=32.5
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
...||++|||+|+||+++|+.|++. +++|+|||+.+..
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~--G~~V~liE~~~~~ 81 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGA--GYKVAMFDIGEID 81 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCC
T ss_pred cccCCEEEECCcHHHHHHHHHHHhC--CCcEEEEeccCCC
Confidence 3469999999999999999999995 4799999988655
No 386
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=95.02 E-value=0.016 Score=66.73 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=30.2
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+|++|||||+||+.+|++|++.+ .+|+|||.++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G--~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLG--VPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCC--CcEEEEeccCCc
Confidence 69999999999999999998864 789999988754
No 387
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.02 E-value=0.013 Score=70.98 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=32.3
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+||++|||||+||+++|.+|++. +.+|+|||+++..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL--GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC--CCeEEEEeCCCCC
Confidence 48999999999999999999986 4799999998655
No 388
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.00 E-value=0.014 Score=71.13 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=32.6
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+||++|||||+||+++|.+|++. +.+|+|||+++..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL--GMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCc
Confidence 58999999999999999999986 4799999998665
No 389
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.98 E-value=0.014 Score=72.84 Aligned_cols=151 Identities=14% Similarity=0.170 Sum_probs=79.3
Q ss_pred eechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce---EEEc---CCc--EEEeeEEEecCCCCCC---CCC------c
Q psy10545 442 ICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS---IRIN---NKK--IINANCIIDGRGLKNS---QFD------G 501 (1428)
Q Consensus 442 i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~---v~l~---~g~--~~~a~lvI~AdG~~S~---~~~------~ 501 (1428)
++...+...|.+.+.+.| .++.+++|+++.. +. |++. +|+ +++|+.||.|.|..|. ... .
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~ 264 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSP 264 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCCC
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccCc
Confidence 455677778888888788 7888899998863 22 4442 343 6999999999998753 111 1
Q ss_pred ceEEEEEEEEEecCC-cCCCCceEEecccCCCCCcceEEEEeeCCCCceEEEeEEec---c--CCCCCHHHHHHHHHHHH
Q psy10545 502 IYQIFLGQQWNLSSP-HGLDIPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYT---K--KPFLKIDMLKKSIKDYA 575 (1428)
Q Consensus 502 ~~q~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~f~~~lPl~~~~~~v~~~~~~---~--~~~~~~~~~~~~l~~~~ 575 (1428)
..+..-|.-+.++.+ ......++++.. .. +| ..+|++|.. +...++.+... . ....+.+.. +.+.+.+
T Consensus 265 ~i~p~rG~~l~~~~~~~~~~~~~~~~~~--~~-dg-r~~~~~P~~-~~~~iG~t~~~~~~~~~~~~~~~~~~-~~ll~~~ 338 (571)
T 2rgh_A 265 KMRPTKGIHLVVDAKKLPVPQPTYFDTG--KQ-DG-RMVFAIPRE-NKTYFGTTDTDYQGDFTDPKVTQEDV-DYLLDVI 338 (571)
T ss_dssp CBCCEEEEEEEEEGGGSCCSSCEEEECS--SS-SS-CEEEEEEET-TEEEECCCCEECCSCSSSCCCCHHHH-HHHHHHH
T ss_pred eeeccceEEEEeccccCCCCcEEEEecc--CC-CC-cEEEEEEcC-CeEEEcCCCcCCCCCcCCCCCCHHHH-HHHHHHH
Confidence 122233444444322 122234433321 01 22 246788985 56667654321 1 112223332 2233333
Q ss_pred HH-cC---CccceeeeeeeeeecccCC
Q psy10545 576 IK-NR---WKLKNIEREEIGSIPIALK 598 (1428)
Q Consensus 576 ~~-~~---~~~~~~~~~~~~~~Pl~~~ 598 (1428)
.+ ++ +...++...-.|.-|+...
T Consensus 339 ~~~~P~~~l~~~~v~~~waG~Rp~~~d 365 (571)
T 2rgh_A 339 NHRYPEANITLADIEASWAGLRPLLIG 365 (571)
T ss_dssp HHHSTTTCCCGGGCCEEEEEEECCBCC
T ss_pred HHhcCccCCchhceeEEeEEeeeccCC
Confidence 22 33 2333455444678888743
No 390
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.97 E-value=0.017 Score=70.43 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=35.8
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCC-eEEEEccCCCCCCceeEE
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKL-NVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~-~v~~~~~~~~~~~~tw~~ 52 (1428)
..+|++|||+|+||+++|++|.+.+ . +|+|+|+++..+.+.+++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g--~~~v~~~e~~~~~gg~~~~~ 47 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAG--ITDLLILEATDHIGGRMHKT 47 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTT--CCCEEEECSSSSSBTTSCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CCceEEEeCCCCCCCceeec
Confidence 4689999999999999999999864 6 899999998775455544
No 391
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.93 E-value=0.016 Score=70.86 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=33.5
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+|++|||||+||+++|.+|.+.+++.+|+|||+++..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 46999999999999999999987677999999988654
No 392
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.91 E-value=0.016 Score=69.68 Aligned_cols=36 Identities=22% Similarity=0.380 Sum_probs=32.6
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
.|++|||||+||+++|++|.+.+++.+|+|||+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 699999999999999999998666799999998854
No 393
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=94.88 E-value=0.026 Score=64.46 Aligned_cols=31 Identities=16% Similarity=0.381 Sum_probs=29.2
Q ss_pred HHHHHhcCCchHHHHHHHHhhcCCeEEE-EcC
Q psy10545 312 KIRIFSGAGIGGIALAIRLQTAGISTII-LEQ 342 (1428)
Q Consensus 312 ~~~ii~g~~~~~~~~a~~La~~G~~V~l-ie~ 342 (1428)
++++|+|+|++|+.+|..|+++|++|+| +|+
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~ 36 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK 36 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Confidence 3678999999999999999999999999 998
No 394
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.84 E-value=0.019 Score=72.29 Aligned_cols=38 Identities=11% Similarity=0.219 Sum_probs=34.7
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..|++|||||+||+++|.+|.+.+++.+|+|+|+++..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 47999999999999999999998788999999998754
No 395
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.82 E-value=0.016 Score=70.32 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=30.4
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEcc
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLEL 41 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~ 41 (1428)
.+||++|||||+||+++|.+|++.+ .+|+|||+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~ 36 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLG--IPTVLVEG 36 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHT--CCEEEECS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CEEEEEcc
Confidence 4699999999999999999999874 79999998
No 396
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.82 E-value=0.018 Score=68.59 Aligned_cols=35 Identities=26% Similarity=0.500 Sum_probs=31.9
Q ss_pred cEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 10 DFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 10 d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
.|+|||||+||+++|.+|.+.+++.+|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 58999999999999999998888899999998753
No 397
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.81 E-value=0.021 Score=68.06 Aligned_cols=37 Identities=19% Similarity=0.130 Sum_probs=33.5
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.|++|||||+||+++|.+|.+.+++.+|+|||+++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 5899999999999999999998877799999998744
No 398
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.77 E-value=0.022 Score=73.28 Aligned_cols=45 Identities=24% Similarity=0.403 Sum_probs=39.2
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEEec
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQ 54 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~w~ 54 (1428)
.+|++|||||+||+++|+.|++.+ .+|+|+|+++..+.++|.+..
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~ggri~T~~~ 380 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFG--IKVTVLEAKDRIGGRVWDDKS 380 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSCTTCCEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CcEEEEecccceeceeeeccc
Confidence 579999999999999999999975 799999999877667877643
No 399
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.77 E-value=0.0016 Score=67.90 Aligned_cols=90 Identities=12% Similarity=0.057 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhccC-CCccCceEEE--EecCcccHHHHhCCCCCcccccccccccccccCCCCCCCCCCceEEecCC
Q psy10545 1100 SIKLKNIVFMYLEQYCI-PNLRKKLITQ--RIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAG 1176 (1428)
Q Consensus 1100 ~ee~~~~vl~~L~~~~~-P~l~~~i~~~--~~~tp~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~t~~i~~Ly~aGd~ 1176 (1428)
++++++.++++|.+ ++ |.+ ..+... .. .+|....+. .|+.....++.. ..+++....| +.+|||||++
T Consensus 56 ~~e~~~~~l~~L~~-~~g~~~-~~~~~~~~~~---~~W~~dp~~-~Ga~s~~~pg~~--~~~~~~l~~p-~grl~FAGe~ 126 (181)
T 2e1m_C 56 DAERYGYALENLQS-VHGRRI-EVFYTGAGQT---QSWLRDPYA-CGEAAVYTPHQM--TAFHLDVVRP-EGPVYFAGEH 126 (181)
T ss_dssp TTTTHHHHHHHHHH-HHCGGG-GGTEEEEEEE---EESSSCTTT-SSSEECCCTTHH--HHHHHHHHSC-BTTEEECSGG
T ss_pred HHHHHHHHHHHHHH-HhCCCc-HhhccCccee---cccCCCCCC-CCcccCcCCCch--HHHHHHHhCC-CCcEEEEEHH
Confidence 46778899999998 66 655 333211 11 122222111 343221222221 1122333444 7899999999
Q ss_pred ccCC-CCcccccccccccccccc
Q psy10545 1177 THPG-AANKIIKAGSKSFSSAIK 1198 (1428)
Q Consensus 1177 t~pg-~gv~GA~~sg~~~a~~i~ 1198 (1428)
|... +.|+||+.||..+|..|.
T Consensus 127 ts~~~g~~eGAl~SG~raA~~i~ 149 (181)
T 2e1m_C 127 VSLKHAWIEGAVETAVRAAIAVN 149 (181)
T ss_dssp GTTSTTSHHHHHHHHHHHHHHHH
T ss_pred HcCCccCHHHHHHHHHHHHHHHH
Confidence 8742 369999999999998875
No 400
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.76 E-value=0.019 Score=71.20 Aligned_cols=38 Identities=26% Similarity=0.425 Sum_probs=33.8
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..||+||||+|.+|+.+|++|++. ++.+|++||.+...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCcC
Confidence 469999999999999999999985 56899999998654
No 401
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.74 E-value=0.016 Score=75.90 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=45.6
Q ss_pred eeeechHHHHHHHHHhccCC-eEEecceEEEEeC--Ce---EEEcCCcEEEeeEEEecCCCCCC
Q psy10545 440 YSICSKHLNSYLIRALGINN-FLFNNKTVEIITP--TS---IRINNKKIINANCIIDGRGLKNS 497 (1428)
Q Consensus 440 ~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~--~~---v~l~~g~~~~a~lvI~AdG~~S~ 497 (1428)
..++...+.+.|.+.+.+.| .++.+++|++|.. +. |++.+| +++|+.||.|+|..|.
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGA 208 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchH
Confidence 45678889999999998888 6788999999864 32 455555 8999999999999864
No 402
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.71 E-value=0.018 Score=72.94 Aligned_cols=36 Identities=25% Similarity=0.268 Sum_probs=31.6
Q ss_pred cccEEEECccHHHHHHHHHHh---c-cCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLK---Q-YNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~---~-~~~~~~v~~~~~~~~~ 45 (1428)
++|++|||+|+|||++|+.|+ + . +.+|+|||+.+..
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~--G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLG--GLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTT--TCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhC--CCeEEEEeCcCCC
Confidence 589999999999999999998 4 4 4799999998654
No 403
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.67 E-value=0.025 Score=67.60 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=33.6
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.|++|||||+||+++|.+|.+.+++.+|+|||+++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 4999999999999999999998887889999998654
No 404
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.65 E-value=0.023 Score=69.83 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=33.3
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCC
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSS 44 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~ 44 (1428)
+..+||+||||+|++|+.+|++|++ ++++|++||.+..
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~~~ 45 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQ--AGIPTQIVEMGRS 45 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCCC
Confidence 4457999999999999999999999 4689999998753
No 405
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=94.64 E-value=0.017 Score=70.27 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=29.1
Q ss_pred cEEEECccHHHHHHHHHHhccCCCCeEEEEccC
Q psy10545 10 DFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS 42 (1428)
Q Consensus 10 d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~ 42 (1428)
|++|||+|+||+++|++|++. +++|+|||+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~--G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA--GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 899999999999999999986 4799999998
No 406
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.61 E-value=0.022 Score=71.29 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=33.9
Q ss_pred ccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 9 WDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 9 ~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.|++|||||+||+++|++|.+.+++.+|+|+|+++..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 5899999999999999999998888999999998654
No 407
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.58 E-value=0.023 Score=68.76 Aligned_cols=39 Identities=15% Similarity=0.035 Sum_probs=34.6
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..+|++|||+|+||+.+|.+|.+.+++.+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 458999999999999999999998777999999988654
No 408
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.56 E-value=0.016 Score=69.85 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=31.6
Q ss_pred cccEEEECccHHHHHHHHHHhcc-CCCCeEEEEccCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQY-NPKLNVLLLELSS 43 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~-~~~~~v~~~~~~~ 43 (1428)
+.|++|||||+||+++|.+|.+. .++.+|+|||+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 57999999999999999999882 3468999999886
No 409
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.49 E-value=0.029 Score=67.79 Aligned_cols=37 Identities=19% Similarity=0.079 Sum_probs=33.2
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..+|++|||||+||+++|++|.+.+ .+|+|+|+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G--~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKG--YEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeccCCC
Confidence 4689999999999999999999975 689999998765
No 410
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.43 E-value=0.024 Score=70.85 Aligned_cols=38 Identities=32% Similarity=0.472 Sum_probs=33.5
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+||+||||+|+||+.+|.+|++. ++++|++||.+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCCcc
Confidence 469999999999999999999984 46899999998654
No 411
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=94.41 E-value=0.026 Score=71.08 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=31.2
Q ss_pred CccccEEEECccHHHHHHHHHHhccCCCCeEEEEccC
Q psy10545 6 NYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELS 42 (1428)
Q Consensus 6 ~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~ 42 (1428)
...||++|||||+||+++|.+|++.+ ++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g--~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYG--AKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCC--CeEEEEecc
Confidence 34699999999999999999999964 799999974
No 412
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.40 E-value=0.022 Score=69.66 Aligned_cols=49 Identities=12% Similarity=0.114 Sum_probs=37.8
Q ss_pred HHHHHHHHhccCC-eEEecceEEEEeCC-----eEEEcCCcEEEeeEEEecCCCC
Q psy10545 447 LNSYLIRALGINN-FLFNNKTVEIITPT-----SIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 447 l~~~L~~~~~~~~-~~~~~~~v~~i~~~-----~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.+.+.+.+++.| .++.+++|+.+..+ .|++.+|.++.+|.||-|.|..
T Consensus 233 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 233 LRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 4556666777778 67888999988643 2677788889999999998865
No 413
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.30 E-value=0.021 Score=68.12 Aligned_cols=50 Identities=14% Similarity=-0.005 Sum_probs=39.9
Q ss_pred HHHHHHHHHhccCC-eEEecceEEEEeCCeEEEcCCcEEEeeEEEecCCCC
Q psy10545 446 HLNSYLIRALGINN-FLFNNKTVEIITPTSIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 446 ~l~~~L~~~~~~~~-~~~~~~~v~~i~~~~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.+.+.+.+.+++.| .++.+++|+.++.+.|++.||+++.+|+||-|-|..
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCC
Confidence 34555666666667 678889999999888999999999999999887744
No 414
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.20 E-value=0.029 Score=67.44 Aligned_cols=34 Identities=24% Similarity=0.455 Sum_probs=31.6
Q ss_pred cEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 10 DFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 10 d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
.|+|||||+||+++|.+|.+.+++.+|+|||+++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 5999999999999999999988899999999874
No 415
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.11 E-value=0.018 Score=70.65 Aligned_cols=36 Identities=33% Similarity=0.326 Sum_probs=32.5
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.++|++|||||+||+++|++|.+. .+|+|+|+++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCC
Confidence 357999999999999999999986 799999998766
No 416
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.02 E-value=0.031 Score=68.57 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=32.9
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+||+||||+|++|+.+|++|++. +++|+|||.+...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~--~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA--GVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCC
Confidence 469999999999999999999994 5899999988644
No 417
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=93.98 E-value=0.045 Score=69.58 Aligned_cols=44 Identities=27% Similarity=0.396 Sum_probs=37.0
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
..+|++|||+|+|||++|++|.+.+ .+|+|+|+++..+.+.+.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g--~~v~~~e~~~~~gg~~~~~ 149 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFG--MDVTLLEARDRVGGRVATF 149 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSSSSBTTCCEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEecCCCCCCccccc
Confidence 4589999999999999999999864 7999999998885454444
No 418
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.94 E-value=0.039 Score=70.64 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=33.3
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..+|++|||||+||+++|+.|++.+ .+|+|+|+++..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G--~~V~liE~~~~~ 426 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRG--YDVVLAEAGRDL 426 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCC
Confidence 4589999999999999999999974 799999998766
No 419
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.88 E-value=0.036 Score=65.06 Aligned_cols=87 Identities=20% Similarity=0.241 Sum_probs=68.1
Q ss_pred HHHhcCCchHHHHHHHHhhcCCeEEEEcCCCCCcccccccccCCCCcccCcchhHHHHHHHHHhcCCCceEEEeecCCCC
Q psy10545 314 RIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYPNTNQGLWNSIIAWYLKQYNPKLNVLLLELSSSV 393 (1428)
Q Consensus 314 ~ii~g~~~~~~~~a~~La~~G~~V~lie~~~~~~~~~~~~~~~~~~~~~g~Gl~~~~~~~~~~~~~~~~rv~~l~~~s~~ 393 (1428)
++|+|+|+.++-.|..|++.|.+|+++|+.+.+
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~----------------------------------------------- 178 (367)
T 1xhc_A 146 AIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF----------------------------------------------- 178 (367)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC-----------------------------------------------
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee-----------------------------------------------
Confidence 568899999999999999999999999987543
Q ss_pred CCceeeeccCCcCcccccccccccccccCccEEEcCCCcccccccceeeechHHHHHHHHHhccCC-eEEecceEEEEeC
Q psy10545 394 KNHIWSFHQNDISSSQYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINN-FLFNNKTVEIITP 472 (1428)
Q Consensus 394 ~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~-~~~~~~~v~~i~~ 472 (1428)
.+ ++ ..+.+.+.+.+++.| .++.+++|+.++.
T Consensus 179 -----------------l~---------------~~---------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~ 211 (367)
T 1xhc_A 179 -----------------LG---------------LD---------------EELSNMIKDMLEETGVKFFLNSELLEANE 211 (367)
T ss_dssp -----------------TT---------------CC---------------HHHHHHHHHHHHHTTEEEECSCCEEEECS
T ss_pred -----------------cc---------------CC---------------HHHHHHHHHHHHHCCCEEEcCCEEEEEEe
Confidence 00 00 134556666677778 5788899999986
Q ss_pred CeEEEcCCcEEEeeEEEecCCCC
Q psy10545 473 TSIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 473 ~~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
+.|++.+|+ +.+|.||.|.|..
T Consensus 212 ~~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 212 EGVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp SEEEETTEE-EECSCEEEECCEE
T ss_pred eEEEECCCE-EEcCEEEECcCCC
Confidence 678888887 9999999888855
No 420
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=93.84 E-value=0.026 Score=68.29 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=33.3
Q ss_pred cccEEEECccHHHHHHHHHHhc-cCC----CCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQ-YNP----KLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~-~~~----~~~v~~~~~~~~~ 45 (1428)
.+|++|||||+||+++|.+|.+ ..+ +.+|+|||+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5899999999999999999988 644 6899999988655
No 421
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.84 E-value=0.048 Score=52.74 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=44.8
Q ss_pred cEEEcCEEEEcCCHHHHHHHhcCCCCCChhHHHHHhhcCCCCceEEEEEeecCCc
Q psy10545 973 QIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIYFGLSEQY 1027 (1428)
Q Consensus 973 ~~i~ad~VV~A~~~~~~~~~Ll~~~~~p~~~~~~l~~~~~~~s~~~v~l~~~~~~ 1027 (1428)
+++.||+||+|+|+..+. .+.-.+++|..+.++++++.++ +..|+++.|+++|
T Consensus 4 ~~~~Ad~VIvTvP~~vL~-~I~F~P~LP~~k~~Ai~~l~~g-~~~Kv~l~f~~~F 56 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR-FVKVTPPFSYKKRRAVIETHYD-QATKVLLEFSRRW 56 (130)
T ss_dssp EEEEESEEEECSCHHHHT-TSEEESCCCHHHHHHHHHCCEE-CEEEEEEEESSCG
T ss_pred eEEEcCEEEEcCCHHHHh-cCcCCCCCCHHHHHHHHhCCCc-ceeEEEEEECCCC
Confidence 478999999999887655 4544567999999999999998 6789999999994
No 422
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.63 E-value=0.037 Score=66.59 Aligned_cols=46 Identities=20% Similarity=0.274 Sum_probs=37.9
Q ss_pred HHHHHhccCC-eEEecceEEEEeCCeEEEcCCcEEEeeEEEecCCCC
Q psy10545 450 YLIRALGINN-FLFNNKTVEIITPTSIRINNKKIINANCIIDGRGLK 495 (1428)
Q Consensus 450 ~L~~~~~~~~-~~~~~~~v~~i~~~~v~l~~g~~~~a~lvI~AdG~~ 495 (1428)
.+.+.+++.| .++.+++|+.++...+++.+|+++.+|+||-|-|..
T Consensus 193 ~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 193 PILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp HHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEecee
Confidence 3455555567 588899999999888999999999999999988855
No 423
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=93.52 E-value=0.062 Score=69.60 Aligned_cols=44 Identities=27% Similarity=0.396 Sum_probs=36.9
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCCCceeEE
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSF 52 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~~~tw~~ 52 (1428)
..+|++|||+|+|||++|++|.+.+ .+|+|+|.+...+.+.+.|
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g--~~v~v~E~~~~~GG~~~~~ 320 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFG--MDVTLLEARDRVGGRVATF 320 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTCCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEEecCcCCCceeee
Confidence 3579999999999999999999865 7999999998885454444
No 424
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=93.51 E-value=0.056 Score=66.24 Aligned_cols=35 Identities=23% Similarity=0.073 Sum_probs=25.5
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
..||+||||+|||||++|.+|.+.+ ...+++|...
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~--~~~~~~~~~~ 72 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDAL--DPRLNKSASN 72 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHH--CTTTCTTC--
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcC--CCceEEeccc
Confidence 3589999999999999999998864 2334444443
No 425
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=92.96 E-value=0.067 Score=68.76 Aligned_cols=37 Identities=22% Similarity=0.207 Sum_probs=33.1
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
..+|++|||||+||+++|..|++.+ .+|+|+|+++..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G--~~Vtlie~~~~~ 424 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESG--YTVHLTDTAEKI 424 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCc
Confidence 3589999999999999999999964 799999998766
No 426
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.90 E-value=0.044 Score=72.73 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=33.1
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVK 46 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~~ 46 (1428)
++|++|||+|+||+++|.+|.+.+ .+|+|||+++..+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G--~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSG--ARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCCCCC
Confidence 589999999999999999999864 7999999987664
No 427
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=92.77 E-value=0.079 Score=67.54 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=32.6
Q ss_pred cccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
.+|++|||||+||+++|..|.+. +.+|+|||+++..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCC
Confidence 58999999999999999999986 4799999998766
No 428
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.52 E-value=0.093 Score=61.87 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=32.2
Q ss_pred CCccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 5 KNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 5 ~~~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
......++|||||+||+++|.+| ..++.+|+|||+++..
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L--~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAA--LGKCDDITMINSEKYL 44 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHH--TTTCSCEEEECSSSSC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHH--hCCCCEEEEEECCCCC
Confidence 33467899999999999999999 3467999999998654
No 429
>3aqb_B Component B of hexaprenyl diphosphate synthase; prenyltransferase, transferase; 2.40A {Micrococcus luteus} PDB: 3aqc_B*
Probab=92.40 E-value=5.5 Score=45.20 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=83.5
Q ss_pred HHHHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh---hCCCcc----chHHHHHHHHHHHHHHHHHhcc--
Q psy10545 1282 LFEHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL---IGVKEK----DTLNCARNLGIAFQLTNISRDV-- 1350 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~---~~~~~~----~~~~~a~~~g~a~q~~nilrd~-- 1350 (1428)
..++..|...|+.... -.|++++.+-+++=.|++-.+.+.+ ++-.++ ....++.++|.|+|+.|=+-|+
T Consensus 139 ~~~~~~GQ~~dl~~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~afQi~DD~ld~~~ 218 (325)
T 3aqb_B 139 ILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTS 218 (325)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcccCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3588999999997532 3588888776666666665555544 332222 2457889999999999877776
Q ss_pred ---------hhhhcCCceeecHHHHHhcC-CC-cc------ccc-cccchHH---HHHHH-----HHHHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEG-LN-KS------NFV-LAENRKK---LFKVV-----TRILDVAEFYYSSSL 1404 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~-~~-~~------~~~-~~~~~~~---~~~~~-----~~~~~~A~~~~~~a~ 1404 (1428)
+.|+..|++-+|.=..-+.. -. .+ ++. .+...+. +.+.+ ...-+.++++.++|+
T Consensus 219 ~~~~~GK~~g~Dl~~gk~T~p~i~al~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~ 298 (325)
T 3aqb_B 219 DEATLGKPVGSDIRNGHITYPLMAAIANLKEQDDDKLEAVVKHLTSTSDDEVYQYIVSQVKQYGIEPAELLSRKYGDKAK 298 (325)
T ss_dssp CHHHHSSCTTHHHHTTCCCHHHHHHHHHHHHTTCCHHHHHHHTCCTTCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCccchHhhCCCccHHHHHHHHhCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888899999874432211 00 00 111 1111122 22222 233566889999999
Q ss_pred HhhcCCCccc
Q psy10545 1405 VKLNTLPLRS 1414 (1428)
Q Consensus 1405 ~~~~~lp~~~ 1414 (1428)
..+..+|...
T Consensus 299 ~~L~~lp~~~ 308 (325)
T 3aqb_B 299 YHLSQLQDSN 308 (325)
T ss_dssp HHHHTSCCCH
T ss_pred HHHHhCCCcH
Confidence 9999999754
No 430
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.02 E-value=0.097 Score=69.94 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=32.8
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCCCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSV 45 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~~~ 45 (1428)
+.+|++|||||+||+++|.+|++.+.. +|+|+|+.+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~-~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYS-DITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCC-CEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCC-cEEEEeCCCCC
Confidence 468999999999999999999997632 79999987655
No 431
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=91.99 E-value=0.087 Score=66.32 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=32.9
Q ss_pred cccEEEECccHHHHHHHHHHhccC------CCCeEEEEccCC-CC
Q psy10545 8 YWDFILIGAGLWNSIIAWYLKQYN------PKLNVLLLELSS-SV 45 (1428)
Q Consensus 8 ~~d~~i~G~G~ag~~~a~~~~~~~------~~~~v~~~~~~~-~~ 45 (1428)
.++++|||||+|||++|++|.+.+ ++.+|+|+|.++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 479999999999999999998865 227999999998 66
No 432
>4f62_A Geranyltranstransferase; enzyme function initiative, structural genomics; 2.10A {Marinomonas SP}
Probab=91.37 E-value=1 Score=50.75 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=70.0
Q ss_pred HHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh---hCC-Ccc----chHHHHHHHHHHHHHHHHHhcchhhh
Q psy10545 1284 EHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL---IGV-KEK----DTLNCARNLGIAFQLTNISRDVIDDF 1354 (1428)
Q Consensus 1284 ~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~~~-~~~----~~~~~a~~~g~a~q~~nilrd~~~d~ 1354 (1428)
.|+.|...|+... ...|++++..-.++=.|++-.+.+.+ ++- .++ ....++.++|.|+|+.+=+-|+..|-
T Consensus 152 ~m~~GQ~lDl~~~~~~~t~~~y~~i~~~KTg~L~~~a~~~Ga~lag~a~~~~~~~l~~~g~~lGlAFQI~DDiLD~~gd~ 231 (317)
T 4f62_A 152 GMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDT 231 (317)
T ss_dssp THHHHHHHHHHTSSSCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred hHHHhHHHHHhccCCCCCHHHHHHHHHhchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Confidence 5788999998753 23588888776655555544444433 332 232 24678899999999999988885432
Q ss_pred c-CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q psy10545 1355 Y-VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLR 1413 (1428)
Q Consensus 1355 ~-~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~ 1413 (1428)
+ .|+- .-+|+.++..+--+.-.+..--+.|+++.++|++.+..+|..
T Consensus 232 ~~~GK~------------~g~Dl~egK~T~p~l~gle~a~~~a~~~~~~A~~~L~~l~~~ 279 (317)
T 4f62_A 232 ETLGKT------------QFSDAEANKATYPKLLGLDGAKALVVRLHEQAIAQISEFGDK 279 (317)
T ss_dssp -------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred HhhCCC------------cchHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh
Confidence 2 2220 012333333222223355666778889999999999999864
No 433
>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus}
Probab=91.30 E-value=1.5 Score=50.10 Aligned_cols=132 Identities=17% Similarity=0.100 Sum_probs=84.4
Q ss_pred HHHHHHHHHhhccCC--CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcc--
Q psy10545 1282 LFEHLDGFEMDVMER--TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDV-- 1350 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~--~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~-- 1350 (1428)
..+++.|...|+... .-.|++++..-+++=.|++-.+.+.+ + |.++. ....++.++|.|+|+.|=+-|+
T Consensus 148 ~~~~~~GQ~~dl~~~~~~~~t~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQI~DD~ld~~~ 227 (341)
T 3mzv_A 148 SAVIAEGEVLQLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227 (341)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhccCCCCCHHHHHHHHHcchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 457889999998643 24588888776666556555554443 3 33322 2467889999999999988887
Q ss_pred ---------hhhhcCCceeecHHHHHhcCCCcc-----cccc-----ccchHHHHHH------HHHHHHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGLNKS-----NFVL-----AENRKKLFKV------VTRILDVAEFYYSSSLV 1405 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~------~~~~~~~A~~~~~~a~~ 1405 (1428)
+.|+..|++-+|.=..-+..-..+ ++.. ......+.+. +..--+.|+++.++|+.
T Consensus 228 d~~~~GK~~g~Dl~egK~Tlp~i~al~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~l~~~ga~~~a~~~a~~~~~~A~~ 307 (341)
T 3mzv_A 228 KSAEIGKNTGDDFRERKLTMPVIKAVALADEAERAFWKRVIEKGDQQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARK 307 (341)
T ss_dssp --------CCHHHHTTCCCHHHHHHHHTCCHHHHHHHHHHTTSCCCCTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCCCCcccccCchhHHHHHHHHhCCHhHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 468889999999755433221100 0110 1111222222 34456778999999999
Q ss_pred hhcCCCcc
Q psy10545 1406 KLNTLPLR 1413 (1428)
Q Consensus 1406 ~~~~lp~~ 1413 (1428)
.+..+|..
T Consensus 308 ~L~~lp~~ 315 (341)
T 3mzv_A 308 ALAKLPDH 315 (341)
T ss_dssp HHTTSCCC
T ss_pred HHHhCCCC
Confidence 99999864
No 434
>3ts7_A Geranyltranstransferase; isoprenoid synthesis, farnesyl diphosphate synthase; 1.94A {Methylococcus capsulatus}
Probab=91.13 E-value=1.3 Score=50.00 Aligned_cols=110 Identities=15% Similarity=0.100 Sum_probs=74.1
Q ss_pred HHHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh---hCC-Cccc----hHHHHHHHHHHHHHHHHHhcchh-
Q psy10545 1283 FEHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL---IGV-KEKD----TLNCARNLGIAFQLTNISRDVID- 1352 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~~~-~~~~----~~~~a~~~g~a~q~~nilrd~~~- 1352 (1428)
..|+.|...|+... .-.|++++..-.++=.|++-.+.+.+ ++- .+++ ...++.++|.|+|+.+=+-|+..
T Consensus 158 ~~m~~GQ~lDl~~~~~~~t~~~y~~i~~~KTg~L~~~a~~~Ga~lag~a~~~~~~~l~~~g~~lGlAFQI~DDiLD~~~d 237 (324)
T 3ts7_A 158 AGMVGGQAIDLASVGKKLDLPGLENMHIRKTGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESD 237 (324)
T ss_dssp TTHHHHHHHHHHTTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHhHHHHHHccCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 36788988998753 24588888887766666665555544 332 2322 45788999999999998888744
Q ss_pred ----------hhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1353 ----------DFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1353 ----------d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
|+..|++-+|. .-.+..--+.|++++++|++.+..+|...
T Consensus 238 ~~~~GK~~g~Dl~egK~T~p~----------------------l~gle~a~~~a~~~~~~A~~~L~~l~~~~ 287 (324)
T 3ts7_A 238 TQTLGKTRGKDRDHNKPNYPA----------------------LLGLSGAKEKAEEMHEAALESLAGFGPEA 287 (324)
T ss_dssp ---------------CCCHHH----------------------HHCHHHHHHHHHHHHHHHHHTTTTCCGGG
T ss_pred HHHhCCCccchhhcCCccHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHhCCccH
Confidence 44455555553 22455556788999999999999999763
No 435
>3rmg_A Octaprenyl-diphosphate synthase; structural genomics, protein structure initiative, isoprene biosynthesis, transferase; 2.30A {Bacteroides thetaiotaomicron}
Probab=91.06 E-value=1.6 Score=49.67 Aligned_cols=134 Identities=15% Similarity=0.099 Sum_probs=84.4
Q ss_pred HHHHHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh---hCCCcc----chHHHHHHHHHHHHHHHHHhcc-
Q psy10545 1281 LLFEHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL---IGVKEK----DTLNCARNLGIAFQLTNISRDV- 1350 (1428)
Q Consensus 1281 ~~~~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~---~~~~~~----~~~~~a~~~g~a~q~~nilrd~- 1350 (1428)
...+++.|...|+.... -.|++++..-+++=.|++-.+.+.+ ++-.++ ....++.++|.|+|+.|=+-|+
T Consensus 141 ~~~~~~~GQ~ldl~~~~~~~~t~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQi~DD~ld~~ 220 (334)
T 3rmg_A 141 LGQKLAEGELLQLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF 220 (334)
T ss_dssp HHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHcCChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 34678899999987543 3588888776665555555544433 332232 2467889999999999988887
Q ss_pred ---------hhhhcCCceeecHHHHHhcCCCc--ccc---c-cc----cchHHHHH------HHHHHHHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGLNK--SNF---V-LA----ENRKKLFK------VVTRILDVAEFYYSSSLV 1405 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~~~--~~~---~-~~----~~~~~~~~------~~~~~~~~A~~~~~~a~~ 1405 (1428)
+.|+..|++-+|.=..-+..-.. ..+ . .+ +....+.+ .+..--+.|+++.++|+.
T Consensus 221 ~~~~~GK~~g~Dl~egK~T~p~i~al~~~~~~~~~~L~~~l~~~~~~~~~~~~v~~~i~~~g~~~~a~~~~~~~~~~A~~ 300 (334)
T 3rmg_A 221 DSKKIGKPTGNDMLEGKLTLPALYALNTTKDAWAEQIAFKVKEGTATPDEIVRLIEFTKDNGGIEYACRTIEQYKKKAFD 300 (334)
T ss_dssp CC------CCHHHHTTCCCHHHHHHHHHHCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCCchhhhhcCchHHHHHHHHHhCChhhHHHHHHHHcCCCCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 37888999999975533322110 001 0 01 11112222 234445678899999999
Q ss_pred hhcCCCccc
Q psy10545 1406 KLNTLPLRS 1414 (1428)
Q Consensus 1406 ~~~~lp~~~ 1414 (1428)
.+..+|...
T Consensus 301 ~L~~lp~~~ 309 (334)
T 3rmg_A 301 LLAALPDSN 309 (334)
T ss_dssp HHTTSCCCH
T ss_pred HHHhCCCcH
Confidence 999998643
No 436
>1uby_A FPS, farnesyl diphosphate synthase; transferase, isoprene biosynthesis, cholesterol biosynthesis; HET: DMA; 2.40A {Gallus gallus} SCOP: a.128.1.1 PDB: 1ubw_A* 1ubv_A* 1ubx_A* 1fps_A
Probab=90.94 E-value=4.6 Score=46.63 Aligned_cols=136 Identities=10% Similarity=0.056 Sum_probs=80.0
Q ss_pred HHHHHHHHhhccCCC-------CCCHHHHHHHHHHHhHHH-HHHHH---Hhh-C-CCcc---chHHHHHHHHHHHHHHHH
Q psy10545 1283 FEHLDGFEMDVMERT-------YITLDETLGYCYHVAGTI-GLIIA---HLI-G-VKEK---DTLNCARNLGIAFQLTNI 1346 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~~-------~~t~~~l~~Y~~~vag~v-g~~~~---~~~-~-~~~~---~~~~~a~~~g~a~q~~ni 1346 (1428)
.++..|...|+.... -.|++++..=+++=.|.+ -.+.+ .++ | .++. ....++.++|.|+|+.+=
T Consensus 179 ~~~~~GQ~lDl~~~~~~~~d~~~~t~~~y~~ii~~KTa~Lsf~~~~~~ga~lag~~~~~~~~~l~~~g~~lG~aFQI~DD 258 (367)
T 1uby_A 179 YQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDD 258 (367)
T ss_dssp HHHHHHHHHHHHHSCTTSCCCTTCCHHHHHHHHHHHTHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccccccCCHHHHHHHHHhCchHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999986432 347888776555544443 22222 223 4 2322 246788999999999998
Q ss_pred Hhcch----------hhhcCCceeecHHHHHhcCCCccc---c---ccc---cchHHHHHHHH------HHHHHHHHHHH
Q psy10545 1347 SRDVI----------DDFYVGRCYLPLDWLRNEGLNKSN---F---VLA---ENRKKLFKVVT------RILDVAEFYYS 1401 (1428)
Q Consensus 1347 lrd~~----------~d~~~gR~ylP~~~~~~~~~~~~~---~---~~~---~~~~~~~~~~~------~~~~~A~~~~~ 1401 (1428)
+-|+- .|+..|++-||.=..-+.. ++++ + ... .....+++++. ..-..++++++
T Consensus 259 ~LD~~gd~~~~GK~g~Dl~egK~T~p~l~al~~~-~~~~~~~l~~~~~~~~~~~~~~v~~li~~~g~~~~~~~~~~~~~~ 337 (367)
T 1uby_A 259 YLDCFGDPALTGAVGTDIQDNKCSWLVVQCLQRV-TPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYR 337 (367)
T ss_dssp HHHHHCCTTCSSCCCCCSSSCCCCHHHHHHHHHC-CHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHhcCChhhcCCchhhHHcCCchHHHHHHHHhC-CHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 88874 5788899999975433221 2211 1 111 11122222222 11245888999
Q ss_pred HHHHhhcCCCcc-chHHHH
Q psy10545 1402 SSLVKLNTLPLR-STLAIV 1419 (1428)
Q Consensus 1402 ~a~~~~~~lp~~-~~~a~~ 1419 (1428)
+|+..+..+|.. .+-++.
T Consensus 338 ~A~~~L~~lp~~~~k~~L~ 356 (367)
T 1uby_A 338 RLQELIEKHSNRLPKEIFL 356 (367)
T ss_dssp HHHHHHHHHCSSSCTHHHH
T ss_pred HHHHHHHhCCCcHHHHHHH
Confidence 999999988854 344443
No 437
>2her_A Fragment, farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, structural genomics, structural genomics consortium, SGC; HET: ZOL; 2.37A {Cryptosporidium parvum} PDB: 2o1o_A* 2q58_A*
Probab=90.85 E-value=2.4 Score=48.78 Aligned_cols=145 Identities=11% Similarity=0.009 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhccCCC---CCCH-HHHHHHHHHHhHHH-HHHHH---Hh-hCCCccc-----hHHHHHHHHHHHHHHHHH
Q psy10545 1282 LFEHLDGFEMDVMERT---YITL-DETLGYCYHVAGTI-GLIIA---HL-IGVKEKD-----TLNCARNLGIAFQLTNIS 1347 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~~---~~t~-~~l~~Y~~~vag~v-g~~~~---~~-~~~~~~~-----~~~~a~~~g~a~q~~nil 1347 (1428)
..+++.|...|+.... -.+. +++..=+++=.|.+ -.+.+ .+ -|.+++. ...++.++|.|+|+.+=+
T Consensus 177 ~~~~~~GQ~lDl~~~~~~~~~~~~~~y~~ii~~KTa~Lsf~~~~~lGa~lag~~~~~~~~~~l~~~g~~lG~aFQI~DD~ 256 (368)
T 2her_A 177 IFFTVLGQHLDLSYFDLSKADKISERYFSMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLIEAILYKLGEFYQVHNDV 256 (368)
T ss_dssp HHHHHHHHHHHHCSCCCSSCSSHHHHHHHHHHHHTHHHHTHHHHHHHHHHSCCCCCCSSTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCChHHHHHHHHHccchHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999997643 2344 44443333333332 12222 22 2443332 578999999999999988
Q ss_pred hcc------hhhhcCCceeecHHHHHhcCCCccc---c---ccccchHHHHHH------HHHHHHHHHHHHHHHHHhhcC
Q psy10545 1348 RDV------IDDFYVGRCYLPLDWLRNEGLNKSN---F---VLAENRKKLFKV------VTRILDVAEFYYSSSLVKLNT 1409 (1428)
Q Consensus 1348 rd~------~~d~~~gR~ylP~~~~~~~~~~~~~---~---~~~~~~~~~~~~------~~~~~~~A~~~~~~a~~~~~~ 1409 (1428)
-|+ +.|+..|++-||.=..-+. .++++ + ..... ..++++ +....+.++++++.|+..+..
T Consensus 257 LD~~~~GK~g~Dl~egK~T~pvi~al~~-a~~~~r~~L~~~~~~~~-~~v~~li~~~g~~~~~~~~~~~~~~~A~~~L~~ 334 (368)
T 2her_A 257 SDYLFNDSNADDICRFKLTWPLQKSFEI-ADEEMKLKISENYGKNS-SLVKDCYNLLKINEHYLEYQRNALDYLIKLVKD 334 (368)
T ss_dssp HHHHSCCSSSCTTTTTCCCHHHHSSTTT-CCHHHHHHHHHHTTTCH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCChHhCCcccHHHHHHHHh-CCHHHHHHHHHHhCCcH-HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 886 5799999999986432221 11111 1 11111 444443 334556789999999999999
Q ss_pred CCccc-hHHHH-HHHHHhhhC
Q psy10545 1410 LPLRS-TLAIV-TSWSIYREI 1428 (1428)
Q Consensus 1410 lp~~~-~~a~~-~a~~~y~~i 1428 (1428)
+|... +-++. .+..||.-|
T Consensus 335 lp~~~~k~~L~~l~~~i~~~~ 355 (368)
T 2her_A 335 ITDDSLQKVFIHLIHQISELI 355 (368)
T ss_dssp CSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHh
Confidence 99743 33333 456677644
No 438
>2ihi_A Pyrophosphate synthase; PV092040, structural genomics, structural genomics consortium, SGC, transferase; 2.00A {Plasmodium vivax sai-1} PDB: 3mav_A 3cc9_A* 3ez3_A* 3ldw_A* 3mys_A* 3ph7_A* 3rbm_A* 3ryw_A*
Probab=90.73 E-value=11 Score=43.94 Aligned_cols=131 Identities=13% Similarity=0.094 Sum_probs=79.0
Q ss_pred HHHHHHHHHhhcc----------------------CCC----CCCHHHHHHHHHHHhHHH-H---HHHHHhh-CCCccc-
Q psy10545 1282 LFEHLDGFEMDVM----------------------ERT----YITLDETLGYCYHVAGTI-G---LIIAHLI-GVKEKD- 1329 (1428)
Q Consensus 1282 ~~~li~~~~~dl~----------------------~~~----~~t~~~l~~Y~~~vag~v-g---~~~~~~~-~~~~~~- 1329 (1428)
...++.|...|++ ... -.|++++..-+++=.|.+ - ..+..++ |.++..
T Consensus 187 ~~~~~~GQ~lDl~~~~~~~~~~~~~~~~~~~~~~~e~~~dl~~~t~~~y~~i~~~KTa~Ls~~~~~~~ga~lag~~~~~~ 266 (395)
T 2ihi_A 187 TLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPEQPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNL 266 (395)
T ss_dssp HHHHHHHHHHHHHTTSHHHHCSSSCCCTTCCCCC-CCCCCGGGCSHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCTTCT
T ss_pred HHHHHHhHHHHHHhhhhcccccccccccccccccccccccccCCCHHHHHHHHHccchHHHHHHHHHHHHHHcCCChhhH
Confidence 3678999999992 111 347788766444444433 1 1122233 433332
Q ss_pred ----hHHHHHHHHHHHHHHHHHhcc----------hhhhcCCceeecHHHHHhcCCCccc---c---ccccchH---HHH
Q psy10545 1330 ----TLNCARNLGIAFQLTNISRDV----------IDDFYVGRCYLPLDWLRNEGLNKSN---F---VLAENRK---KLF 1386 (1428)
Q Consensus 1330 ----~~~~a~~~g~a~q~~nilrd~----------~~d~~~gR~ylP~~~~~~~~~~~~~---~---~~~~~~~---~~~ 1386 (1428)
...++.++|.|+|+.+=+-|+ +.|+..|++-+|.=..-+.. ++++ | ......+ .++
T Consensus 267 ~~~~l~~~g~~lG~aFQI~DD~LD~~gd~~~~GK~g~Dl~egK~T~p~l~al~~~-~~~~~~~L~~~~~~~~~~~~~~v~ 345 (395)
T 2ihi_A 267 IYKKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKVGSDIQNNKLTWPLIKTFELC-SEPDKIKIVKNYGKNNLACVKVID 345 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC---------CTTTTTCCCHHHHHHHHHC-CHHHHHHHHHHCC-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHhCCCcchhhcCCchHHHHHHHHhC-CHHHHHHHHHHhCCCCHHHHHHHH
Confidence 457889999999999988887 46888999999865443321 1111 1 1111112 222
Q ss_pred H------HHHHHHHHHHHHHHHHHHhhcCCCcc
Q psy10545 1387 K------VVTRILDVAEFYYSSSLVKLNTLPLR 1413 (1428)
Q Consensus 1387 ~------~~~~~~~~A~~~~~~a~~~~~~lp~~ 1413 (1428)
+ ++....+.+++++++|+..+..+|..
T Consensus 346 ~l~~~~g~~~~~~~~~~~~~~~A~~~L~~lp~~ 378 (395)
T 2ihi_A 346 SLYEQYKIRKHYESYEKAQKAKILSAINELHHE 378 (395)
T ss_dssp HC----CHHHHHHHHHHHHHHHHHHHHTTSCCH
T ss_pred HHHHHCChHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2 33445567889999999999999983
No 439
>1wmw_A Geranylgeranyl diphosphate synthetase; GGPP, prenyl diphosphate synthase, structural genom riken structural genomics/proteomics initiative; 1.55A {Thermus thermophilus}
Probab=90.72 E-value=6.1 Score=44.92 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhccC---C-CCCCHHHHHHHHHHHhHHH-HHHHHHh---hCCCccc--hHHHHHHHHHHHHHHHHHhcc-
Q psy10545 1282 LFEHLDGFEMDVME---R-TYITLDETLGYCYHVAGTI-GLIIAHL---IGVKEKD--TLNCARNLGIAFQLTNISRDV- 1350 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~---~-~~~t~~~l~~Y~~~vag~v-g~~~~~~---~~~~~~~--~~~~a~~~g~a~q~~nilrd~- 1350 (1428)
..+++.|...|+.. . .-.|++++..-+++=.|.+ -.+.+.+ ++-.+++ ...++.++|.|+|+.|=+-|+
T Consensus 139 ~~~~~~GQ~~dl~~~~~~~~~~~~~~y~~~i~~KTa~Ls~~~~~~~ga~lag~~~~~~l~~~g~~lG~aFQi~DD~ld~~ 218 (330)
T 1wmw_A 139 VRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTPPAAYEEGGLRLGTAFQIVDDVLNLE 218 (330)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHccccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHccCccc
Confidence 46889999999864 2 2458888877666655555 4444433 3322222 567899999999999888886
Q ss_pred ---------hhhhcCCceeecHHHHHhcCCCccc---c---cc-ccc---hHH---HHHHH------HHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGLNKSN---F---VL-AEN---RKK---LFKVV------TRILDVAEFYYSS 1402 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~~~~~---~---~~-~~~---~~~---~~~~~------~~~~~~A~~~~~~ 1402 (1428)
+.|+..|++-+|.=..-+.. ++++ + .. +.. .+. +.+.+ ...-+.++++.++
T Consensus 219 ~d~~~GK~~g~Dl~egK~T~p~i~al~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~a~~~~~~~~~~ 297 (330)
T 1wmw_A 219 GGEAYGKERAGDLYEGKRTLILLRFLEEA-PPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAE 297 (330)
T ss_dssp CSCCCSSSTTHHHHHTCCCHHHHHHHHHS-CHHHHHHHHHHHTSCGGGSCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCcCchhhCCCCCHHHHHHHHhC-CHHHHHHHHHHHcCcccCCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 56888899999975433222 1110 1 11 011 122 22222 2233568888899
Q ss_pred HHHhhc----CCCcc
Q psy10545 1403 SLVKLN----TLPLR 1413 (1428)
Q Consensus 1403 a~~~~~----~lp~~ 1413 (1428)
|+..+. .+|..
T Consensus 298 A~~~L~~~i~~lp~~ 312 (330)
T 1wmw_A 298 GLALLEAAFQDLPGK 312 (330)
T ss_dssp HHHHHHTGGGGCSCH
T ss_pred HHHHHHHHhhcCCCc
Confidence 999998 88853
No 440
>3p8r_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.50A {Vibrio cholerae} SCOP: a.128.1.1
Probab=90.56 E-value=1.5 Score=49.12 Aligned_cols=119 Identities=19% Similarity=0.218 Sum_probs=72.3
Q ss_pred HHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh---hCC-Ccc----chHHHHHHHHHHHHHHHHHhcchhhh
Q psy10545 1284 EHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL---IGV-KEK----DTLNCARNLGIAFQLTNISRDVIDDF 1354 (1428)
Q Consensus 1284 ~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~~~-~~~----~~~~~a~~~g~a~q~~nilrd~~~d~ 1354 (1428)
.|+.|...|+... ...|++++..-+++=.|.+-.+.+.+ ++- .++ ....++.++|.|+|+.|=+-|+..|-
T Consensus 159 ~~~~GQ~lDl~~~~~~~s~~~y~~i~~~KTa~L~~~~~~~ga~lag~~~~~~~~~l~~~g~~lG~aFQI~DDilD~~~~~ 238 (302)
T 3p8r_A 159 GMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDT 238 (302)
T ss_dssp THHHHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHhHHHHHHccCCCCCHHHHHHHhccCcHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 5788988998754 34588888776655555554444443 332 122 24678999999999999888875442
Q ss_pred c-CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1355 Y-VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1355 ~-~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
+ .|+- .-+|+.++..+--+.-.+..--+.|+++.++|++.+..+|...
T Consensus 239 ~~~GK~------------~g~Dl~egK~T~p~l~~l~~a~~~a~~~~~~A~~~L~~l~~~~ 287 (302)
T 3p8r_A 239 ETLGKP------------QGSDQELNKSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNT 287 (302)
T ss_dssp --------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCT
T ss_pred HHhCCC------------cchHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccH
Confidence 2 2220 0123333333333333566667889999999999999999753
No 441
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=90.51 E-value=0.17 Score=61.78 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=29.8
Q ss_pred ccccEEEECccHHHHHHHHHHhccCCCCeEEEEccCC
Q psy10545 7 YYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSS 43 (1428)
Q Consensus 7 ~~~d~~i~G~G~ag~~~a~~~~~~~~~~~v~~~~~~~ 43 (1428)
....|+|||||.||+++|.+|.+. +.+|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~--~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK--KYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT--TCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC--CCcEEEECCCC
Confidence 345699999999999999999774 57999999873
No 442
>3oyr_A Trans-isoprenyl diphosphate synthase; isoprenyl synthase, PSI, protein structure initiative; HET: IPE; 2.00A {Caulobacter crescentus}
Probab=90.51 E-value=2.3 Score=48.52 Aligned_cols=132 Identities=20% Similarity=0.207 Sum_probs=80.3
Q ss_pred HHHHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcc--
Q psy10545 1282 LFEHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDV-- 1350 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~-- 1350 (1428)
..+|+.|...|+.... -.|++++..-+++=.|++-.+.+.+ + |.++. ....++.++|.|+|+.+=+-|+
T Consensus 160 ~~~~~~GQ~~dl~~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQi~DD~lD~~~ 239 (345)
T 3oyr_A 160 SRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGG 239 (345)
T ss_dssp HHHHHHHHHHHHHTSSCSSCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHcchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3578999999987542 3588888876666666665555543 3 33322 2467889999999999988887
Q ss_pred ---------hhhhcCCceeecHHHHHhcCCCcc-c----cc-----cccchHHHHHH------HHHHHHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGLNKS-N----FV-----LAENRKKLFKV------VTRILDVAEFYYSSSLV 1405 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~~~~-~----~~-----~~~~~~~~~~~------~~~~~~~A~~~~~~a~~ 1405 (1428)
+.|+..|++-+|.=..-+..-..+ + +. ..+....+.+. +..-.+.|+++.++|++
T Consensus 240 d~~~~GK~~g~Dl~egK~TlP~i~al~~~~~~~~~~l~~~l~~~~~~~~~~~~v~~~i~~~gale~a~~~a~~~~~~A~~ 319 (345)
T 3oyr_A 240 ATETLGKNAGDDFREGKATLPLLLAIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKA 319 (345)
T ss_dssp -----------------CCHHHHHHHHHSCSHHHHHHHHHCC----CCSSHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ChhhcCCCccchhhcCchHHHHHHHHHhCCHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 368888999999755433321100 0 00 11122233333 34556778999999999
Q ss_pred hhcCCCcc
Q psy10545 1406 KLNTLPLR 1413 (1428)
Q Consensus 1406 ~~~~lp~~ 1413 (1428)
.+..+|..
T Consensus 320 ~L~~lp~~ 327 (345)
T 3oyr_A 320 ALAMFPAN 327 (345)
T ss_dssp TTTTSCSS
T ss_pred HHHhCCCc
Confidence 99999964
No 443
>2qis_A Farnesyl pyrophosphate synthetase; trans-prenyltransferase, structural genomics, structural GEN consortium, SGC, transferase; HET: RIS; 1.80A {Homo sapiens} PDB: 4dem_F* 1yv5_A* 1yq7_A* 2opm_A* 2opn_A* 3cp6_A* 2rah_A* 2vf6_A* 1zw5_A* 3b7l_A* 3s4j_A* 3rye_A* 3n45_F* 2f89_F* 2f7m_F* 2f8z_F* 2f8c_F* 2f92_F* 2f9k_F* 3n1v_F* ...
Probab=90.40 E-value=6.5 Score=45.44 Aligned_cols=131 Identities=11% Similarity=0.070 Sum_probs=80.9
Q ss_pred HHHHHHHHhhccCCC---C----CCHHHHHHHHHHHhHHH-HHHHH---HhhCC-Cccc----hHHHHHHHHHHHHHHHH
Q psy10545 1283 FEHLDGFEMDVMERT---Y----ITLDETLGYCYHVAGTI-GLIIA---HLIGV-KEKD----TLNCARNLGIAFQLTNI 1346 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~~---~----~t~~~l~~Y~~~vag~v-g~~~~---~~~~~-~~~~----~~~~a~~~g~a~q~~ni 1346 (1428)
.+++.|...|+.... . .|++++..-+++=.|.+ -.+.+ .+++- .+++ ...++.++|.|+|+.+=
T Consensus 186 ~~~~~GQ~lDl~~~~~~~~d~~~~t~~~y~~i~~~KTa~Lsf~~~~~~ga~lag~a~~~~~~~l~~~g~~lG~aFQI~DD 265 (374)
T 2qis_A 186 YQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKSAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDD 265 (374)
T ss_dssp HHHHHHHHHHHHHSCTTCCCGGGCCHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccccccccCCHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577899999987532 1 48888887666655555 33322 23332 3332 45788999999999998
Q ss_pred Hhcch----------hhhcCCceeecHHHHHhcCCCccc---c---ccc---cchHHHHHHHH------HHHHHHHHHHH
Q psy10545 1347 SRDVI----------DDFYVGRCYLPLDWLRNEGLNKSN---F---VLA---ENRKKLFKVVT------RILDVAEFYYS 1401 (1428)
Q Consensus 1347 lrd~~----------~d~~~gR~ylP~~~~~~~~~~~~~---~---~~~---~~~~~~~~~~~------~~~~~A~~~~~ 1401 (1428)
+-|+- .|+..|++-+|.=..-+.. ++++ + ... .....+++++. .....++++++
T Consensus 266 iLD~~gd~~~~GK~g~Dl~~gK~T~p~l~al~~a-~~~~~~~l~~~~~~~~~~~~~~v~~li~~~g~~~~~~~~~~~~~~ 344 (374)
T 2qis_A 266 YLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRA-TPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYS 344 (374)
T ss_dssp HHHHHSCHHHHCSCCCTTTTTCCCHHHHHHHHHC-CHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHccCChhhcCCchhHHHcCCccHHHHHHHHhC-CHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 88873 5788899999975432221 1110 1 111 11222333332 12444888999
Q ss_pred HHHHhhcCCCccc
Q psy10545 1402 SSLVKLNTLPLRS 1414 (1428)
Q Consensus 1402 ~a~~~~~~lp~~~ 1414 (1428)
.|+..+..+|...
T Consensus 345 ~a~~~L~~lp~~~ 357 (374)
T 2qis_A 345 HIMALIEQYAAPL 357 (374)
T ss_dssp HHHHHHHHHCTTS
T ss_pred HHHHHHHhCCCch
Confidence 9999999998653
No 444
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.35 E-value=0.17 Score=49.58 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=30.6
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999853
No 445
>3lsn_A Geranyltranstransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; HET: MSE; 1.35A {Pseudomonas fluorescens} PDB: 3lji_A* 3p41_A*
Probab=90.28 E-value=1.7 Score=48.62 Aligned_cols=118 Identities=17% Similarity=0.126 Sum_probs=71.9
Q ss_pred HHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc----chHHHHHHHHHHHHHHHHHhcchhhh
Q psy10545 1284 EHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK----DTLNCARNLGIAFQLTNISRDVIDDF 1354 (1428)
Q Consensus 1284 ~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~----~~~~~a~~~g~a~q~~nilrd~~~d~ 1354 (1428)
.|+.|...|+... ...|++++..-+++=.|++-.+.+.+ + |..++ ....++.++|.|+|+.|=+-|+-.|-
T Consensus 153 ~~~~GQ~lDl~~~~~~~s~~~y~~i~~~KTg~L~~~~~~~ga~lag~~~~~~~~~l~~~g~~lGlaFQI~DDilD~~~~~ 232 (304)
T 3lsn_A 153 GMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDT 232 (304)
T ss_dssp THHHHHHHHHHTTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHhHHHHHHccCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Confidence 4788999998753 23688888877665555555544433 3 33133 24678899999999999888885442
Q ss_pred c-CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q psy10545 1355 Y-VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLR 1413 (1428)
Q Consensus 1355 ~-~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~ 1413 (1428)
+ .|+- .-+|+.++..+--+.-.+..--+.|++++++|.+.+..+|..
T Consensus 233 ~~~GK~------------~g~Dl~egK~T~p~l~~l~~a~~~a~~~~~~A~~~L~~l~~~ 280 (304)
T 3lsn_A 233 ATLGKR------------QGADIARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAA 280 (304)
T ss_dssp HHC------------------------CCHHHHHCHHHHHHHHHHHHHHHHHHTTTSCGG
T ss_pred HHhCCC------------cccHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh
Confidence 1 2221 012333333322223345556788899999999999999974
No 446
>2q80_A Geranylgeranyl pyrophosphate synthetase; isoprenoid pathway, isopentenyl transferase, structural GENO structural genomics consortium, SGC; HET: GRG; 2.70A {Homo sapiens} SCOP: a.128.1.1
Probab=90.24 E-value=3.4 Score=46.33 Aligned_cols=134 Identities=13% Similarity=0.094 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhhccC--C-CCCCHHHHHHHHHHHhHHHHHHHHHh---hCCCccchHHHHHHHHHHHHHHHHHhcc----
Q psy10545 1281 LLFEHLDGFEMDVME--R-TYITLDETLGYCYHVAGTIGLIIAHL---IGVKEKDTLNCARNLGIAFQLTNISRDV---- 1350 (1428)
Q Consensus 1281 ~~~~li~~~~~dl~~--~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~~~~~~~~~~~a~~~g~a~q~~nilrd~---- 1350 (1428)
.+.+|..|...|+.. . ...|++++..-+++=.|++-.+.+.+ ++-.++....++.++|.|+|+.|=+-|+
T Consensus 119 ~~~~~~~GQ~~dl~~~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~~a~~~~~l~~~g~~lG~aFQi~DD~ld~~~~~ 198 (301)
T 2q80_A 119 QLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKE 198 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSCCHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHcccHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHhhhcCCh
Confidence 346788999999863 1 24588888776665555444444433 3334456789999999999999887776
Q ss_pred -------hhhhcCCceeecHHHHHhcCCCccccc----cccchHHHHH----------HHHHHHHHHHHHHHHHHHhhcC
Q psy10545 1351 -------IDDFYVGRCYLPLDWLRNEGLNKSNFV----LAENRKKLFK----------VVTRILDVAEFYYSSSLVKLNT 1409 (1428)
Q Consensus 1351 -------~~d~~~gR~ylP~~~~~~~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~A~~~~~~a~~~~~~ 1409 (1428)
+.|+..|++-+|.=..-+..-....+. .....+.+.+ ++...-+.|+++.++|++.+..
T Consensus 199 ~~~GK~~g~Dl~egK~T~p~i~al~~~~~~~~l~~~l~~~~~~~~~~~~~~~~l~~~g~~~~a~~~~~~~~~~A~~~L~~ 278 (301)
T 2q80_A 199 YSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDA 278 (301)
T ss_dssp -----CTTHHHHHTCCCHHHHHHHHHSTTCCHHHHHHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCCccchhhcCCcHHHHHHHHHcCccchHHHHHHhcCCCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHc
Confidence 467888999999865444321111111 1111222222 1224456688899999999999
Q ss_pred CCccc
Q psy10545 1410 LPLRS 1414 (1428)
Q Consensus 1410 lp~~~ 1414 (1428)
+|...
T Consensus 279 l~~~~ 283 (301)
T 2q80_A 279 RGGNP 283 (301)
T ss_dssp TTCCH
T ss_pred CCCCH
Confidence 98654
No 447
>1yhl_A Farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, bisphosphonate, dimethyl ALLY pyrophosphate sulfate, FPPS, transferase; HET: DMA RIS; 1.95A {Trypanosoma cruzi} PDB: 1yhk_A* 1yhm_A* 3iba_A* 3ick_A* 3icm_A* 3icn_A* 3icz_A* 3id0_A*
Probab=90.15 E-value=8 Score=44.56 Aligned_cols=132 Identities=13% Similarity=0.026 Sum_probs=82.4
Q ss_pred HHHHHHHHHhhccCC--------------C----CCCHHHHHHHHHHHhHHH-HHHHH---HhhCC-Ccc----chHHHH
Q psy10545 1282 LFEHLDGFEMDVMER--------------T----YITLDETLGYCYHVAGTI-GLIIA---HLIGV-KEK----DTLNCA 1334 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~--------------~----~~t~~~l~~Y~~~vag~v-g~~~~---~~~~~-~~~----~~~~~a 1334 (1428)
..+++.|...|+... . -.|++++..-+++=.|.+ -.+.+ .+++- .++ ....++
T Consensus 160 ~~~~~~GQ~ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~KTa~Ls~~~~~~~ga~lag~~~~~~~~~l~~~g 239 (362)
T 1yhl_A 160 DYATAVGQMYDVTSMCDSNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVA 239 (362)
T ss_dssp HHHHHHHHHHHHTTTBCGGGCCTTSCCCBCSSCTTCSHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccccccccccccccccccccCCHHHHHHHHHhcCcHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 357899999999765 2 247888877666555554 33333 23332 222 246788
Q ss_pred HHHHHHHHHHHHHhcch----------hhhcCCceeecHHHHHhcCCCccc---c---cccc---chHHHHHHHH-----
Q psy10545 1335 RNLGIAFQLTNISRDVI----------DDFYVGRCYLPLDWLRNEGLNKSN---F---VLAE---NRKKLFKVVT----- 1390 (1428)
Q Consensus 1335 ~~~g~a~q~~nilrd~~----------~d~~~gR~ylP~~~~~~~~~~~~~---~---~~~~---~~~~~~~~~~----- 1390 (1428)
.++|.|+|+.+=+-|+. .|+..|++-+|.=..-+.. ++++ + .... ....+.+++.
T Consensus 240 ~~lG~aFQi~DD~lD~~~d~~~~GK~g~Dl~egK~T~p~l~al~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~g~~ 318 (362)
T 1yhl_A 240 HLIGEYFQVQDDVMDCFTPPEQLGKVGTDIEDAKCSWLAVTFLGKA-NAAQVAEFKANYGDKDPAKVAVVKRLYSEANLQ 318 (362)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHSSCCCTTTTTCCCHHHHHHHTTC-CHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHhccCChHHhCCChhhHhcCCchHHHHHHHHhC-CHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCH
Confidence 99999999999888874 6888999999975433222 2111 1 1111 1122333322
Q ss_pred -HHHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1391 -RILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1391 -~~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
...+.+++++++|+..+..+|...
T Consensus 319 ~~~~~~~~~~~~~A~~~L~~lp~~~ 343 (362)
T 1yhl_A 319 ADFAAYEAEVVREVESLIEQLKVKS 343 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 234668899999999999998653
No 448
>3uca_A Geranyltranstransferase; isoprenoid synthesis, isoprenoid diphosphate synthase; 2.00A {Clostridium perfringens}
Probab=90.07 E-value=1.6 Score=49.34 Aligned_cols=110 Identities=15% Similarity=0.066 Sum_probs=69.7
Q ss_pred HHHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcch--
Q psy10545 1283 FEHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDVI-- 1351 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~~-- 1351 (1428)
..|+.|...|+.... -.|++++..-+++=.|.+-.+.+.+ + |.+++ ....++.++|.|+|+.|=+.|+.
T Consensus 180 ~~m~~GQ~lDl~~~~~~~~t~~~y~~i~~~KTa~L~~~a~~~Ga~laga~~~~~~~l~~~g~~lGlAFQI~DDiLD~~gd 259 (324)
T 3uca_A 180 DGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGN 259 (324)
T ss_dssp TTHHHHHHHHHHTSSCSSCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hHHHHhHHHHHHcCCCCCCCHHHHHHHHhcchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 357889999987543 4588888776544444444444433 3 33322 24678899999999999888874
Q ss_pred ---------hhhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1352 ---------DDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1352 ---------~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
.|+..|++-+|.= -.+.+--+.|+++.++|++.+..+|...
T Consensus 260 ~~~~GK~~g~Dl~egK~T~p~l----------------------~al~~a~~~a~~~~~~A~~~L~~l~~~~ 309 (324)
T 3uca_A 260 AKDLGKNVHKDQESNKNNYITI----------------------FGLEECKKKCVNITEECIEILSSIKGNT 309 (324)
T ss_dssp -----------------CHHHH----------------------HCHHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHhCCCcchHhhcCCccHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHhCCCcH
Confidence 4555555555542 2344556778889999999999998754
No 449
>3tc1_A Octaprenyl pyrophosphate synthase; all alpha-helices fold, transferase; 2.00A {Helicobacter pylori}
Probab=90.00 E-value=1.8 Score=48.86 Aligned_cols=133 Identities=16% Similarity=0.136 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhhccCC--CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCccchHHHHHHHHHHHHHHHHHhcc----
Q psy10545 1281 LLFEHLDGFEMDVMER--TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEKDTLNCARNLGIAFQLTNISRDV---- 1350 (1428)
Q Consensus 1281 ~~~~li~~~~~dl~~~--~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~~~~~~a~~~g~a~q~~nilrd~---- 1350 (1428)
...+++.|...|+... .-.|++++..-+++=.|++-.+.+.+ + |.+......++.++|.|+|+.|=+-|+
T Consensus 130 ~~~~~~~GQ~~dl~~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~l~~~g~~lG~aFQI~DD~ld~~~d~ 209 (315)
T 3tc1_A 130 AVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLNKDAKIYADFGLNFGMAFQIIDDLLDITQDA 209 (315)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTTSCCT
T ss_pred HHHHHHHHHHHHHHcCCCCCCCHHHHHHHHhcchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccCCH
Confidence 3567889999998743 24588888765555555554444433 2 334334567999999999999988887
Q ss_pred -------hhhhcCCceeecHHHHHhcCCCcc------ccccccchHH---HHH------HHHHHHHHHHHHHHHHHHhhc
Q psy10545 1351 -------IDDFYVGRCYLPLDWLRNEGLNKS------NFVLAENRKK---LFK------VVTRILDVAEFYYSSSLVKLN 1408 (1428)
Q Consensus 1351 -------~~d~~~gR~ylP~~~~~~~~~~~~------~~~~~~~~~~---~~~------~~~~~~~~A~~~~~~a~~~~~ 1408 (1428)
+.|+..|++-+|.=..-+.. +++ ++......+. +.+ ++..-.+.|+++.++|++.+.
T Consensus 210 ~~~GK~~g~Dl~egK~T~p~i~al~~~-~~~~~~~L~~~l~~~~~~~~~~i~~li~~~ga~~~~~~~~~~~~~~A~~~L~ 288 (315)
T 3tc1_A 210 KTLGKPNFSDFKEGKTTLPYLLLYEKL-NQHDQGLLISYFKQDSHEIIEWTKEKFKQYGIIEETLKTAQVYSKKALEAIK 288 (315)
T ss_dssp TCCCCCCCCTGGGTCCCHHHHHHHTTS-CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhCCChhhHHHcCChhHHHHHHHHhC-CHHHHHHHHHHHcCCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 56888899999975544332 211 1111112222 222 233445568899999999999
Q ss_pred CCCccc
Q psy10545 1409 TLPLRS 1414 (1428)
Q Consensus 1409 ~lp~~~ 1414 (1428)
.+|...
T Consensus 289 ~lp~s~ 294 (315)
T 3tc1_A 289 GENNLI 294 (315)
T ss_dssp TTCCHH
T ss_pred hCCCcH
Confidence 998754
No 450
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.93 E-value=0.22 Score=59.98 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=32.3
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
...+|.|||.|.+|+++|..|+++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45789999999999999999999999999999865
No 451
>3m0g_A Farnesyl diphosphate synthase; structural genomics, protein structure initiative, NYSGXRC, biosynthesis, transferase, PSI-2; 1.90A {Rhodobacter capsulatus} PDB: 3lvs_A
Probab=89.91 E-value=0.65 Score=51.91 Aligned_cols=110 Identities=18% Similarity=0.126 Sum_probs=69.3
Q ss_pred HHHHHHHHhhccCC---CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCccchHHHHHHHHHHHHHHHHHhcch----
Q psy10545 1283 FEHLDGFEMDVMER---TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEKDTLNCARNLGIAFQLTNISRDVI---- 1351 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~---~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~~~~~~a~~~g~a~q~~nilrd~~---- 1351 (1428)
..|+.|...|+... .-.|++++..-+++=.|.+-.+.+.+ + |.+......++.++|.|+|+.|=+-|+.
T Consensus 147 ~~~~~GQ~lDl~~~~~~~~~~~~~y~~i~~~KTg~L~~~~~~~ga~lag~~~~~l~~~g~~lG~aFQI~DDilD~~~~~~ 226 (297)
T 3m0g_A 147 EGMVYGQALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAILAGADRGPLTAYATALGLAFQIADDILDVEGNEE 226 (297)
T ss_dssp TTHHHHHHHHHHHTTSSSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCC-------
T ss_pred hHHHHhHHHHHHhhhcCCCCCHHHHHHHHccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 36888998998754 34588888876666555554444433 2 4444456789999999999998777764
Q ss_pred -------hhhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1352 -------DDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1352 -------~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
.|+..|++-+|.=. .+..--+.|+++.++|++.+..+|...
T Consensus 227 ~~GK~~g~Dl~~gK~T~p~l~----------------------~l~~a~~~~~~~~~~A~~~L~~~~~~~ 274 (297)
T 3m0g_A 227 AAGKRLGKDAEAHKATFVSLL----------------------GLAGAKSRAADLVAEAEAALAPYGEAA 274 (297)
T ss_dssp --------------CCHHHHH----------------------CSSHHHHHHHHHHHHHHHHTGGGGGGG
T ss_pred HhCCCccchhhcCCccHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 45555665555432 233345668888888888888888765
No 452
>3lom_A Geranyltranstransferase; geranyltransferase, structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Legionella pneumophila subsp}
Probab=89.82 E-value=1.4 Score=49.70 Aligned_cols=109 Identities=12% Similarity=0.124 Sum_probs=71.2
Q ss_pred HHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh--hCC--Ccc----chHHHHHHHHHHHHHHHHHhcchh-
Q psy10545 1284 EHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL--IGV--KEK----DTLNCARNLGIAFQLTNISRDVID- 1352 (1428)
Q Consensus 1284 ~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~--~~~--~~~----~~~~~a~~~g~a~q~~nilrd~~~- 1352 (1428)
.|+.|...|+.... -.|++++..-.++=.|.+-.+.+.+ ++- .++ ....++.++|.|+|+.|=+.|+..
T Consensus 159 ~m~~GQ~lDl~~~~~~~~t~~~y~~i~~~KTg~L~~~a~~~a~lag~~a~~~~~~~l~~~g~~lGlaFQI~DDilD~~gd 238 (313)
T 3lom_A 159 GMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYAP 238 (313)
T ss_dssp THHHHHHHHHHTTTSSCCCHHHHHHHHHHHTHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhHHHHHHccCCCCCCHHHHHHHHHcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 57889889987542 4588888876655445444443333 332 233 245788999999999998888743
Q ss_pred ----------hhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1353 ----------DFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1353 ----------d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
|+..|++-+|.= -.+..--+.|+++.++|++.+..+|...
T Consensus 239 ~~~~GK~~g~Dl~~gK~T~p~l----------------------~~l~~a~~~a~~~~~~A~~~L~~l~~~~ 288 (313)
T 3lom_A 239 TQILGKGRSSDQANQKTTFATL----------------------FNKQQLEEEIAVHYQIAMDSLRLFGSKA 288 (313)
T ss_dssp ---------------CCCHHHH----------------------SCHHHHHHHHHHHHHHHHHTTTTTGGGG
T ss_pred HHhhCCCCcchhhcCCccHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHhCCccH
Confidence 555555555542 2344556788999999999999998753
No 453
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=89.61 E-value=6.3 Score=45.90 Aligned_cols=186 Identities=11% Similarity=-0.007 Sum_probs=105.9
Q ss_pred hhHHHHHHHHhhhhccccccccCccCcchhhhhhhhhHHHHHHHHHHHHHHHhcCC----CCCcHHHHHHHHHHHHcC--
Q psy10545 1203 VIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRACIGF----KMKEPAFLALQKIISIHS-- 1276 (1428)
Q Consensus 1203 ~~r~~~~~lYaf~r~~Ddi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~p~~~~l~~~~~~~~-- 1276 (1428)
+...-++-+..|.-.+||+.|+....... ..++.+.+.+..++.+. ....|+..+|.++.++..
T Consensus 104 erL~l~a~~~~w~f~~DD~~D~~~~g~~~----------~~~~~~~~~l~~~l~~~~~~p~~~~p~~~al~dl~~~~~~~ 173 (382)
T 3kb9_A 104 EVLQAIADYSAWFFVWDDRHDRDIVHGRA----------GAWRRLRGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYAF 173 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHSCGGGTTCSSHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccCH----------HHHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHcc
Confidence 34446677788888999999973211111 12223333344444442 245799999999888763
Q ss_pred CCHHHHH-------HHHHHHHhhcc---CCCCCCHHHHHHHHHHHhHHHHHHHHH--hhCCCcc-------chHHHHHHH
Q psy10545 1277 FPVHLLF-------EHLDGFEMDVM---ERTYITLDETLGYCYHVAGTIGLIIAH--LIGVKEK-------DTLNCARNL 1337 (1428)
Q Consensus 1277 l~~~~~~-------~li~~~~~dl~---~~~~~t~~~l~~Y~~~vag~vg~~~~~--~~~~~~~-------~~~~~a~~~ 1337 (1428)
.++.+.. ++++++..... ...+.|++|+..+...+.|.--.+.+- .+|..-+ ....+-+..
T Consensus 174 ~~~~~~~r~~~~~~~~~~a~l~Ea~w~~~g~vPs~eEYl~~r~~s~g~~~~~~l~~~~~g~~l~~~~~~~p~~~~l~~~~ 253 (382)
T 3kb9_A 174 LPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLS 253 (382)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTHHHHHHHHHHHHTCCCCHHHHTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCHHHHHHHHHHHcCCCCCHHHHhChHHHHHHHHH
Confidence 4555444 44455544432 345789999998887777753333222 2343211 123345556
Q ss_pred HHHHHHHHHHhcchhhhcCCce-eecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10545 1338 GIAFQLTNISRDVIDDFYVGRC-YLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKL 1407 (1428)
Q Consensus 1338 g~a~q~~nilrd~~~d~~~gR~-ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 1407 (1428)
+...-|+|=|-......+.|-+ =+-.-.+.++|++.+ .+.+.+.++++.+.+.+.++..-+
T Consensus 254 ~~i~rL~NDi~S~~kE~~~G~~~N~V~~~m~~~g~s~e---------eA~~~v~~~i~~~~k~~~~~~~~L 315 (382)
T 3kb9_A 254 QEFAAWYNDLCSLPKEIAGDEVHNLGISLITHHSLTLE---------EAIGEVRRRVEECITEFLAVERDA 315 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHSCCCHH---------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccHHHHHHHcCCCCHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677766666666777754 233345677888754 344455556666655555554444
No 454
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.52 E-value=0.22 Score=50.13 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=31.4
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
..+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
No 455
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.44 E-value=0.22 Score=47.15 Aligned_cols=34 Identities=24% Similarity=0.160 Sum_probs=30.8
Q ss_pred cceeeecCCCcchHHHHHHHHhCC-CeEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAG-ISTIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G-~~V~VlEa~~ 744 (1428)
+.+|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 467999999999999999999999 9999999853
No 456
>3lmd_A Geranylgeranyl pyrophosphate synthase; isoprenyl diphosphate synthase, structural genomics, PSI, protein structure initiative, nysgrc; 1.90A {Corynebacterium glutamicum} PDB: 3q2q_A*
Probab=89.39 E-value=1.7 Score=49.80 Aligned_cols=132 Identities=16% Similarity=0.145 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhhccCCC-CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcc--
Q psy10545 1281 LLFEHLDGFEMDVMERT-YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDV-- 1350 (1428)
Q Consensus 1281 ~~~~li~~~~~dl~~~~-~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~-- 1350 (1428)
.+.+|+.|...|+.... ..|++++..-+++=.|.+-.+.+.+ + |.+++ ....++.++|.|+|+.|=+-|+
T Consensus 168 ~~~~~~~GQ~ldl~~~~~~~t~~~y~~~i~~KTg~L~~~a~~lga~laga~~~~~~~l~~~g~~lG~aFQI~DDilD~~~ 247 (360)
T 3lmd_A 168 TFGELVTGQMRETVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFS 247 (360)
T ss_dssp HHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 34678899999987532 2567777665555555555544433 3 33322 2467889999999999988777
Q ss_pred ---------hhhhcCCceeecHHHHHhcCCCcc-----cccc-cc-chHHHHH---------HHHHHHHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGLNKS-----NFVL-AE-NRKKLFK---------VVTRILDVAEFYYSSSLV 1405 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~~~~-----~~~~-~~-~~~~~~~---------~~~~~~~~A~~~~~~a~~ 1405 (1428)
+.|+..|++-+|.=..-+.. +++ ++.. +. ..+.+.+ .+..--+.|+++.++|+.
T Consensus 248 d~~~~GK~~g~Dl~egK~Tlp~l~al~~~-~~~~~~L~~~l~~~~~~~~~~~~~~~ll~~~gal~~a~~~a~~~~~~A~~ 326 (360)
T 3lmd_A 248 ETHESGKTPGTDLREGVFTLPVLYALRED-TPVGAELRDILTGPLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANA 326 (360)
T ss_dssp --------CCHHHHHTCCCHHHHHHHHCC-SHHHHHHHHHCSSCCCSHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhCCCchhHHhcCCchHHHHHHHHcC-CchHHHHHHHHcCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 46788899999976554431 111 0111 11 1122222 234455678899999999
Q ss_pred hhcCCCcc
Q psy10545 1406 KLNTLPLR 1413 (1428)
Q Consensus 1406 ~~~~lp~~ 1413 (1428)
.+..+|..
T Consensus 327 ~L~~lp~~ 334 (360)
T 3lmd_A 327 ELDRLPDS 334 (360)
T ss_dssp HHTTSCCS
T ss_pred HHHhCCCc
Confidence 99999964
No 457
>3lk5_A Geranylgeranyl pyrophosphate synthase; structural genomics, protein structure initiative, geranylge pyrophosphate synthase; 1.90A {Corynebacterium glutamicum} PDB: 3qqv_A*
Probab=89.36 E-value=4.8 Score=46.62 Aligned_cols=138 Identities=16% Similarity=0.095 Sum_probs=81.8
Q ss_pred HHHHHHHHhhccCC--CCCCHHHHHHHHHHHhHHH-HHHHH---Hhh-CCCcc---chHHHHHHHHHHHHHHHHHhcc--
Q psy10545 1283 FEHLDGFEMDVMER--TYITLDETLGYCYHVAGTI-GLIIA---HLI-GVKEK---DTLNCARNLGIAFQLTNISRDV-- 1350 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~--~~~t~~~l~~Y~~~vag~v-g~~~~---~~~-~~~~~---~~~~~a~~~g~a~q~~nilrd~-- 1350 (1428)
.+++.|...|+... .-.|++++..-+++=.|.+ -.+.+ .++ |.++. ....+..++|.|+|+.+=+-|+
T Consensus 185 ~~~~~GQ~lDl~~~~~~~~s~~~y~~ii~~KTa~L~~~~~~~~Ga~laga~~~~~~~l~~~G~~lG~AFQI~DDiLd~~g 264 (380)
T 3lk5_A 185 TEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFG 264 (380)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 46778888888642 3348888876554444443 22222 233 33322 2467889999999999887776
Q ss_pred ---------hhhhcCCceeecHHHHHhcCC--Ccc------cccc----ccchHHHHHH------HHHHHHHHHHHHHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGL--NKS------NFVL----AENRKKLFKV------VTRILDVAEFYYSSS 1403 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~--~~~------~~~~----~~~~~~~~~~------~~~~~~~A~~~~~~a 1403 (1428)
+.|+..|++-+|.=..-+..- +++ ++.. .+....+++. +....+.++++.++|
T Consensus 265 d~~~~GK~~g~Dl~egK~T~p~i~al~~~~~~~~~~~~~L~~~l~~~~~~~~~~~v~~li~~~Ga~~~~~~~~~~~~~~A 344 (380)
T 3lk5_A 265 DPAITGKPAGDDIREGKRTVLLALALQRADKQSPEAATAIRAGVGKVTSPEDIAVITEHIRATGAEEEVEQRISQLTESG 344 (380)
T ss_dssp CHHHHSSCTTHHHHTTCCCHHHHHHHHHHHHHCHHHHHHHHHHTTTCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ChhhhCCCchhhHhcCCchHHHHHHHHhCccCChHHHHHHHHHHCCCCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 568889999998643322110 000 0111 1111223322 334556789999999
Q ss_pred HHhhcCCCc--cchHHHHH
Q psy10545 1404 LVKLNTLPL--RSTLAIVT 1420 (1428)
Q Consensus 1404 ~~~~~~lp~--~~~~a~~~ 1420 (1428)
+..+..+|. .++-++..
T Consensus 345 ~~~L~~lp~~~~~r~~L~~ 363 (380)
T 3lk5_A 345 LAHLDDVDIPDEVRAQLRA 363 (380)
T ss_dssp HHHGGGSCCCHHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHH
Confidence 999999984 34544443
No 458
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.31 E-value=0.21 Score=49.27 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=31.3
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
+..|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999864
No 459
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.27 E-value=0.23 Score=49.81 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=31.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
.+..++|+|+|-.|...|..|.+.|++|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4567999999999999999999999999999986
No 460
>4dhd_A Polyprenyl synthetase; isoprenoid synthesis, isoprenoid diphosphate synthase, trans; 1.65A {Pyrobaculum calidifontis} PDB: 4gp1_A* 4gp2_A*
Probab=89.14 E-value=2 Score=49.33 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=83.8
Q ss_pred HHHHHHHHHhhccCC------------C--CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHH
Q psy10545 1282 LFEHLDGFEMDVMER------------T--YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIA 1340 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~------------~--~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a 1340 (1428)
..+++.|...|+... . -.|++++..-+++=.|.+-.+.+.+ + |.++. ....++.++|.|
T Consensus 141 ~~~~~~GQ~ldl~~~~~~~~dp~~~~~~~~~~t~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~a 220 (358)
T 4dhd_A 141 IKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVA 220 (358)
T ss_dssp HHHHHHHHHHHHHTBSSCCCCHHHHHTCCSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccccccccccccCCCCCCHHHHHHHHHcchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 357889999998754 1 3488888776666666655554443 2 33322 246788999999
Q ss_pred HHHHHHHhcc-----------hhhhcCCce-eecHHHHHhcCCCccc---c---c-ccc-chHH---HHHH------HHH
Q psy10545 1341 FQLTNISRDV-----------IDDFYVGRC-YLPLDWLRNEGLNKSN---F---V-LAE-NRKK---LFKV------VTR 1391 (1428)
Q Consensus 1341 ~q~~nilrd~-----------~~d~~~gR~-ylP~~~~~~~~~~~~~---~---~-~~~-~~~~---~~~~------~~~ 1391 (1428)
+|+.|=+-|+ +.|+..|++ -+|.=..-+.. ++++ + . .+. ..+. +.+. +..
T Consensus 221 FQI~DD~lD~~gd~~~~GK~~g~Dl~egK~~T~p~i~al~~~-~~~~~~~L~~~l~~~~~~~~~~~~i~~li~~~gai~~ 299 (358)
T 4dhd_A 221 FQIIDDVLDIYGDPKKFGKEIGKDIKEHKRGNAVVAVALSHL-GEGERRRLLEILAREVVEEADVREAVALLDSVGAREE 299 (358)
T ss_dssp HHHHHHHHHHHC-------CTTHHHHTTBSCSHHHHHHHHHS-CHHHHHHHHHHHHCSSCCHHHHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHhcCChhhcCCCchhhHhcCChhhHHHHHHHHhC-ChhhHHHHHHHHcCCCCCHHHHHHHHHHHHHcChHHH
Confidence 9999877776 568888999 88875443322 1110 1 0 011 1122 2222 223
Q ss_pred HHHHHHHHHHHHHHhhcCCCccc
Q psy10545 1392 ILDVAEFYYSSSLVKLNTLPLRS 1414 (1428)
Q Consensus 1392 ~~~~A~~~~~~a~~~~~~lp~~~ 1414 (1428)
--+.|+++.++|++.+..+|...
T Consensus 300 a~~~a~~~~~~A~~~L~~lp~~~ 322 (358)
T 4dhd_A 300 ALRLAARYREEAERHLAKIPNNG 322 (358)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCH
Confidence 46778999999999999999554
No 461
>3nf2_A Putative polyprenyl synthetase; isoprenyl diphosphate synthase, structural genomics, PSI, PR structure initiative, nysgrc; 2.20A {Streptomyces coelicolor}
Probab=89.06 E-value=2.1 Score=49.16 Aligned_cols=139 Identities=16% Similarity=0.169 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHhhccCC--CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcc
Q psy10545 1280 HLLFEHLDGFEMDVMER--TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDV 1350 (1428)
Q Consensus 1280 ~~~~~li~~~~~dl~~~--~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~ 1350 (1428)
+.+.+++.|...|+... .-.|++++..-+++=.|.+-.+.+.+ + |.++. ....++.++|.|+|+.+=+-|+
T Consensus 150 ~~~~~l~~GQ~~dl~~~~~~~~t~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQi~DD~ld~ 229 (352)
T 3nf2_A 150 KASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGI 229 (352)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccCCCCCHHHHHHHHHcccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34578899999998643 24588888776666556555555443 3 33322 2467889999999999887776
Q ss_pred -----------hhhhcCCceeecHHHHHhcCCCcc--cc---ccc---------cchHHH---HH------HHHHHHHHH
Q psy10545 1351 -----------IDDFYVGRCYLPLDWLRNEGLNKS--NF---VLA---------ENRKKL---FK------VVTRILDVA 1396 (1428)
Q Consensus 1351 -----------~~d~~~gR~ylP~~~~~~~~~~~~--~~---~~~---------~~~~~~---~~------~~~~~~~~A 1396 (1428)
+.|+..|++-+|.=..-+.+ +++ .+ ... ...+.+ .+ .+..-.+.|
T Consensus 230 ~gd~~~~GK~~g~Dl~egK~Tlpvi~al~~~-~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~li~~~g~~~~a~~~a 308 (352)
T 3nf2_A 230 WGDPDATGKQTWSDLRQRKKSLPVVAALAAG-GAASERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEA 308 (352)
T ss_dssp HCCHHHHSSCTTHHHHTTCCCHHHHHHHHHC-SHHHHHHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred cCChhhhCCCcCcccccCCccHHHHHHHHhC-ChHHHHHHHHHhccccccccCCCCHHHHHHHHHHHHHCCcHHHHHHHH
Confidence 57888999999975544432 111 11 111 011222 22 233445668
Q ss_pred HHHHHHHHHhhcCCCc--cchHHHH
Q psy10545 1397 EFYYSSSLVKLNTLPL--RSTLAIV 1419 (1428)
Q Consensus 1397 ~~~~~~a~~~~~~lp~--~~~~a~~ 1419 (1428)
+++.++|+..+..+|. .++-++.
T Consensus 309 ~~~~~~A~~~L~~lp~~~~~r~~L~ 333 (352)
T 3nf2_A 309 RRQHTIAIEALDAVDMPDRVRDRFT 333 (352)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 9999999999999986 3444443
No 462
>3pko_A Geranylgeranyl pyrophosphate synthase; isoprenyl diphosphate synthase, structural genomics, PSI, PR structure initiative, nysgrc; HET: CIT; 1.98A {Lactobacillus brevis} PDB: 3n3d_A
Probab=88.61 E-value=2.8 Score=47.73 Aligned_cols=131 Identities=20% Similarity=0.207 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhhccCC--CCCCHHHHHHHHHHHhHHHHHHHHHh---hCCCccc----hHHHHHHHHHHHHHHHHHhcc-
Q psy10545 1281 LLFEHLDGFEMDVMER--TYITLDETLGYCYHVAGTIGLIIAHL---IGVKEKD----TLNCARNLGIAFQLTNISRDV- 1350 (1428)
Q Consensus 1281 ~~~~li~~~~~dl~~~--~~~t~~~l~~Y~~~vag~vg~~~~~~---~~~~~~~----~~~~a~~~g~a~q~~nilrd~- 1350 (1428)
.+.+|+.|...|+... .-.|++++.+-+++=.|++-.+.+.+ ++-.+++ ...++.++|.|+|+.|=+-|+
T Consensus 151 ~~~~~~~Gq~~dl~~~~~~~~~~~~yl~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQi~DD~ld~~ 230 (334)
T 3pko_A 151 AMHRILQGELHQMDLNYREDITLDAYLNEIAGKTAELFALSCYQGAQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYA 230 (334)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCHHHHHHHHHHTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3567888988888653 24577777665555555554444433 3322322 456888999999999977776
Q ss_pred ----------hhhhcCCceeecHHHHHhcCCCcccc---c------cccchHHHHHHH------HHHHHHHHHHHHHHHH
Q psy10545 1351 ----------IDDFYVGRCYLPLDWLRNEGLNKSNF---V------LAENRKKLFKVV------TRILDVAEFYYSSSLV 1405 (1428)
Q Consensus 1351 ----------~~d~~~gR~ylP~~~~~~~~~~~~~~---~------~~~~~~~~~~~~------~~~~~~A~~~~~~a~~ 1405 (1428)
+.|+..|++-+|.=..-+.. + +++ . .++....+.+.+ ..-.+.|++++++|+.
T Consensus 231 ~~~~~~GK~~g~Dl~egK~Tlp~i~al~~~-~-~~l~~~l~~~~~~~~~~~~~i~~li~~~ga~~~a~~~~~~~~~~A~~ 308 (334)
T 3pko_A 231 GDPKRTQKPVLEDLRSGVYSLPLLLSLSHA-P-RDFHKLLKKKQAMTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALT 308 (334)
T ss_dssp SCTTSCCHHHHHHHHTTCCCHHHHHHGGGS-H-HHHHHHHTTGGGCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CChhhcCCCCCCccccCchhHHHHHHHHhC-c-HHHHHHHhcCCCCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 46888999999975543321 0 111 1 011112222222 2345678999999999
Q ss_pred hhcCCCcc
Q psy10545 1406 KLNTLPLR 1413 (1428)
Q Consensus 1406 ~~~~lp~~ 1413 (1428)
.+..+|..
T Consensus 309 ~L~~lp~~ 316 (334)
T 3pko_A 309 LIQQLPVG 316 (334)
T ss_dssp HHTTSCSS
T ss_pred HHHhCCCc
Confidence 99999974
No 463
>1rtr_A Geranyltranstransferase; 2.50A {Staphylococcus aureus} SCOP: a.128.1.1
Probab=88.53 E-value=2.6 Score=47.16 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=72.6
Q ss_pred HHHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcchhhh
Q psy10545 1283 FEHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDVIDDF 1354 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~~~d~ 1354 (1428)
..++.|...|+... ...|++++..-+++=.|++-.+.+.+ + |.+++ ....++.++|.|+|+.|=+-|+..|-
T Consensus 148 ~~~~~GQ~~Dl~~~~~~~~~~~y~~i~~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQI~DDilD~~~d~ 227 (301)
T 1rtr_A 148 VGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDE 227 (301)
T ss_dssp TTHHHHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHccCCCCCHHHHHHHHHhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 46788989998643 24588888877776666665554443 2 43332 24678899999999999888885553
Q ss_pred c-CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10545 1355 Y-VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPL 1412 (1428)
Q Consensus 1355 ~-~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~ 1412 (1428)
+ .|+-. -+|+.++..+--+.-++..--+.|+++.++|++.+..+|.
T Consensus 228 ~~~GK~~------------g~Dl~~gK~T~p~l~al~~a~~~a~~~~~~A~~~L~~l~~ 274 (301)
T 1rtr_A 228 AKLGKKV------------GSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDE 274 (301)
T ss_dssp CC-------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred HHhCCCc------------chHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 23210 1233333333223334555577889999999999999984
No 464
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.41 E-value=0.31 Score=48.07 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=31.4
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
+..|+|||.|-.|...|..|.+.|++|+++|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999864
No 465
>1v4e_A Octoprenyl-diphosphate synthase; trans-type prenyltransferase, thermophilic; 2.28A {Thermotoga maritima} SCOP: a.128.1.1 PDB: 1v4j_A 1wkz_A 1vg2_A 1wl3_A 1wl0_A 1wl2_A 1v4h_A 1v4i_A 1v4k_A 2azl_A 1wl1_A 1vg4_A 1vg3_A 1vg6_A 1vg7_A
Probab=87.50 E-value=2.3 Score=47.60 Aligned_cols=132 Identities=14% Similarity=0.100 Sum_probs=82.9
Q ss_pred HHHHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh----hCCCccchHHHHHHHHHHHHHHHHHhcc------
Q psy10545 1282 LFEHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL----IGVKEKDTLNCARNLGIAFQLTNISRDV------ 1350 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~----~~~~~~~~~~~a~~~g~a~q~~nilrd~------ 1350 (1428)
..+++.|...|+... ...|++++..-+++=.|++-.+.+.+ -|.++.....++.++|.|+|+.+=+-|+
T Consensus 136 ~~~~~~GQ~~dl~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~l~~~g~~lG~aFQi~DD~lD~~~d~~~ 215 (299)
T 1v4e_A 136 IGKMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFAGMEKI 215 (299)
T ss_dssp HHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred HHHHhhhHHHHHHccCCCCCHHHHHHHHHhccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 468889999998632 22688888776666555554444433 2444444678999999999999888776
Q ss_pred ----hhhhcCCceeecHHHHHhcCCCccccccccchHHHHHH------HHHHHHHHHHHHHHHHHhhcCCCcc
Q psy10545 1351 ----IDDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKV------VTRILDVAEFYYSSSLVKLNTLPLR 1413 (1428)
Q Consensus 1351 ----~~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~A~~~~~~a~~~~~~lp~~ 1413 (1428)
+.|+..|++-+|.=..-+..-...++...+....+.+. +....+.++.+.++|+..+..+|..
T Consensus 216 GK~~g~Dl~egK~T~p~l~al~~~~~l~~~l~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~A~~~L~~l~~~ 288 (299)
T 1v4e_A 216 GKDGFLDLKNGVASFPLVTAMEKFPEARQMFENRDWSGLMSFMREKGILKECEETLKVLVKNVIIENSWLRDF 288 (299)
T ss_dssp CTTSSCCCTTTTCCHHHHHHHHHCHHHHHHHHTTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCGGGCCC
T ss_pred CCCcchHhhCCCchHHHHHHHHhChHHHHHHhHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 45677899999975432221101111111122223332 3345566788889999988888754
No 466
>2e8v_A Geranylgeranyl pyrophosphate synthetase; prenyltransferase, farnesyl pyrophosphate, bisphosphonate; HET: GRG; 1.80A {Saccharomyces cerevisiae} PDB: 2e8t_A* 2e8u_A* 2dh4_A* 2e8w_A* 2e8x_A* 2e90_A* 2e91_A* 2e92_A* 2e93_A* 2e94_A* 2e95_A* 2z4v_A* 2z4w_A* 2z4x_A* 2z4y_A* 2z4z_A* 2z50_A* 2z52_A* 2z78_A* 2z7h_A* ...
Probab=87.17 E-value=3.3 Score=47.26 Aligned_cols=133 Identities=17% Similarity=0.184 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCc--cchHHHHHHHHHHHHHHHHHhc
Q psy10545 1281 LLFEHLDGFEMDVMER-----TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKE--KDTLNCARNLGIAFQLTNISRD 1349 (1428)
Q Consensus 1281 ~~~~li~~~~~dl~~~-----~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~--~~~~~~a~~~g~a~q~~nilrd 1349 (1428)
.+.+++.|...|+... ...|++++..-+++=.|++-.+.+.+ + |.+. .....++.++|.|+|+.+=+-|
T Consensus 139 ~~~~~~~GQ~ldl~~~~~~~~~~~t~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~l~~~g~~lG~aFQi~DD~ld 218 (340)
T 2e8v_A 139 ELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHHGHSLVPFINLLGIIYQIRDDYLN 218 (340)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4568889999998632 24588888876666555555544443 2 2222 2356899999999999988887
Q ss_pred c-----------hhhhcCCceeecHHHHHhcCCC------cccc---c-cccchH----HHHHH-------HHHHHHHHH
Q psy10545 1350 V-----------IDDFYVGRCYLPLDWLRNEGLN------KSNF---V-LAENRK----KLFKV-------VTRILDVAE 1397 (1428)
Q Consensus 1350 ~-----------~~d~~~gR~ylP~~~~~~~~~~------~~~~---~-~~~~~~----~~~~~-------~~~~~~~A~ 1397 (1428)
+ +.|+..|++-+|.=..-+..-. ...+ . .....+ .+.+. +...-+.|+
T Consensus 219 ~~~~~~~~GK~~g~Dl~egK~Tlp~i~al~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~l~~~~ga~~~~~~~~~ 298 (340)
T 2e8v_A 219 LKDFQMSSEKGFAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFIN 298 (340)
T ss_dssp HHC-----CCCTTHHHHTTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred ccCChhhhCCCchhhHhcCCchHHHHHHHHhCcccccchhHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6 3688889999987543222111 0001 1 111111 22222 234456788
Q ss_pred HHHHHHHHh-----hcCCCcc
Q psy10545 1398 FYYSSSLVK-----LNTLPLR 1413 (1428)
Q Consensus 1398 ~~~~~a~~~-----~~~lp~~ 1413 (1428)
++.++|+.. +..+|..
T Consensus 299 ~~~~~A~~~~~~~~L~~lp~~ 319 (340)
T 2e8v_A 299 QLVNMIKNDNENKYLPDLASH 319 (340)
T ss_dssp HHHHHHHTC------------
T ss_pred HHHHHHHhccCcccHhhCCCC
Confidence 999999998 9998855
No 467
>3apz_A Geranyl diphosphate synthase; prenyltransferase, all alpha-helices fold, chroloplast, TRAN isoprenoid biosynthetic process; 2.60A {Arabidopsis thaliana} PDB: 3aq0_A*
Probab=87.07 E-value=3.4 Score=47.44 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh---hCCCccc----hHHHHHHHHHHHHHHHHHhcch-
Q psy10545 1282 LFEHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL---IGVKEKD----TLNCARNLGIAFQLTNISRDVI- 1351 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~---~~~~~~~----~~~~a~~~g~a~q~~nilrd~~- 1351 (1428)
..+++.|..+|+.... -.|++++..-+++=.|++-.+.+.+ ++-.+++ ...++.++|.|+|+.|=+-|+.
T Consensus 162 ~~~~~~GQ~~dl~~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQi~DD~lD~~g 241 (348)
T 3apz_A 162 VEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTG 241 (348)
T ss_dssp HHHHHHHHHHHHTCCHHHHTCHHHHHHHHHHHHTHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccCCCCCHHHHHHHHHcchHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4688999999997542 2477776654444444433333332 3322322 3568899999999999888863
Q ss_pred ----------hhhcCCceeecHHHHHhcCCCcccccc-----ccchHHHHH------HHHHHHHHHHHHHHHHHHhhcCC
Q psy10545 1352 ----------DDFYVGRCYLPLDWLRNEGLNKSNFVL-----AENRKKLFK------VVTRILDVAEFYYSSSLVKLNTL 1410 (1428)
Q Consensus 1352 ----------~d~~~gR~ylP~~~~~~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~~A~~~~~~a~~~~~~l 1410 (1428)
.|+..|++-+|.=..-+..-...++.. +.....+.+ .+...-+.|+++.++|+..+..+
T Consensus 242 d~~~~GK~~g~Dl~egK~Tlp~l~al~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~g~l~~a~~~~~~~~~~A~~~L~~l 321 (348)
T 3apz_A 242 TSASLGKGSLSDIRHGVITAPILFAMEEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSL 321 (348)
T ss_dssp TTTCTTCSCCHHHHTTCCCHHHHHHHHHCTTHHHHHHTTTTCTHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ChhhcCCcchhhHhCCChhHHHHHHHHcCHHHHHHHHhccCCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHcC
Confidence 578889999997653332111001110 111122222 33445577889999999999999
Q ss_pred Ccc
Q psy10545 1411 PLR 1413 (1428)
Q Consensus 1411 p~~ 1413 (1428)
|..
T Consensus 322 ~~~ 324 (348)
T 3apz_A 322 PET 324 (348)
T ss_dssp CCC
T ss_pred CCC
Confidence 865
No 468
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.17 E-value=0.46 Score=53.79 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=30.7
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
+.+|.|||+|..|...|..|+++|++|++++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 457999999999999999999999999999975
No 469
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.11 E-value=0.46 Score=53.20 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=30.8
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
..+|.|||+|..|...|..|+++|++|++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999975
No 470
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.06 E-value=0.41 Score=54.13 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=30.3
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
..+|+|||||..|..-|..++.+|++|+++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 457999999999999999999999999999975
No 471
>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis}
Probab=85.32 E-value=2.8 Score=46.87 Aligned_cols=116 Identities=15% Similarity=0.114 Sum_probs=65.1
Q ss_pred HHHHHHHhhccCCC-CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcchhhhc
Q psy10545 1284 EHLDGFEMDVMERT-YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDVIDDFY 1355 (1428)
Q Consensus 1284 ~li~~~~~dl~~~~-~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~~~d~~ 1355 (1428)
.|+.|...|+.... -.|++++..-+++=.|.+-.+.+.+ + |.++. ....++.++|.|+|+.|=+.|+..|-.
T Consensus 157 ~~~~GQ~lDl~~~~~~~t~~~y~~i~~~KTg~L~~~~~~~ga~laga~~~~~~~l~~~g~~lGlaFQI~DDilD~~~d~~ 236 (302)
T 3p8l_A 157 GMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEA 236 (302)
T ss_dssp THHHHHHHHHHTTTSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHccCCCCCHHHHHHHHHcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 57788888986532 4588888776555555554444433 3 33322 246788999999999998888854422
Q ss_pred -CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10545 1356 -VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLP 1411 (1428)
Q Consensus 1356 -~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp 1411 (1428)
.|+-. -+|+.++..+--+.-.+..--+.+++++++|.+.+..+|
T Consensus 237 ~~GK~~------------g~Dl~egK~T~p~l~~l~~a~~~~~~~~~~A~~~L~~~~ 281 (302)
T 3p8l_A 237 DLGKKV------------GRDEALNKSTYPALLGIAGAKDALTHQLAEGSAVLEKIK 281 (302)
T ss_dssp --------------------------CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCh------------hhHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22210 123333333322233444455667777777777777775
No 472
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.27 E-value=0.47 Score=53.97 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=30.4
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
...+|.|||+|.-|.+-|..|+++|++|++++++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999999999999999999999999999975
No 473
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=85.23 E-value=0.36 Score=57.88 Aligned_cols=38 Identities=21% Similarity=0.430 Sum_probs=33.6
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccCCCCCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKPGG 748 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~~GG 748 (1428)
.++|.|||.|.+|+++|..|+++|++|++.|.+...-|
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 35799999999999999999999999999999876533
No 474
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.90 E-value=0.44 Score=46.78 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=30.3
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
+.+|+|+|+|..|...|..|.+.|++|++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356999999999999999999999999999875
No 475
>3ipi_A Geranyltranstransferase; isoprene biosynthesis, helical bundle, protein structure initiative II (PSI II), structural genomics, nysgxrc; 1.90A {Methanosarcina mazei}
Probab=84.64 E-value=8.1 Score=42.96 Aligned_cols=118 Identities=14% Similarity=0.187 Sum_probs=71.7
Q ss_pred HHHHHHHHHhhccCCC-CCCHHHHHHHHHHHhHHHHHHHHHh---hCCCcc----chHHHHHHHHHHHHHHHHHhcchh-
Q psy10545 1282 LFEHLDGFEMDVMERT-YITLDETLGYCYHVAGTIGLIIAHL---IGVKEK----DTLNCARNLGIAFQLTNISRDVID- 1352 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~~-~~t~~~l~~Y~~~vag~vg~~~~~~---~~~~~~----~~~~~a~~~g~a~q~~nilrd~~~- 1352 (1428)
..+|+.|...|+.... ..|++++..-+++=.|++-.+.+.+ ++-.++ ....++.++|.|+|+.|=+-|+..
T Consensus 136 ~~~~~~GQ~~dl~~~~~~~t~~~y~~~i~~KTg~L~~~a~~~ga~lag~~~~~~~~l~~~g~~lGlaFQI~DDilD~~~~ 215 (295)
T 3ipi_A 136 GMDMAEGEVLDLKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEV 215 (295)
T ss_dssp HHHHHHHHHHHHC-------CHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccchHHHHccCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3578999999987532 2466776665555555555554443 333332 246788999999999998888854
Q ss_pred ----hhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q psy10545 1353 ----DFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLR 1413 (1428)
Q Consensus 1353 ----d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~ 1413 (1428)
|+..|.+-+|.=...+.+ . .+.+..--+.|+++.++|++.+..+|..
T Consensus 216 ~~gkd~~~gk~Tlp~l~al~~~----------~----~~~le~a~~~a~~~~~~A~~~L~~lp~~ 266 (295)
T 3ipi_A 216 VEGKESKFTSETLPHIYMKSTS----------K----EEALKKSIDCVKLHVAAAKETLETFREC 266 (295)
T ss_dssp HHC-------CCHHHHHTTTSC----------H----HHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccCCCcccCcccHHHHHHHhcC----------c----hhHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 455667777753322111 0 1245566788899999999999999864
No 476
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.43 E-value=0.52 Score=48.80 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.2
Q ss_pred cceeeecCCCcchHHHHHHHHhC-CCeEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTA-GISTIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~-G~~V~VlEa~~ 744 (1428)
..+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 477
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.40 E-value=0.52 Score=54.53 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=31.9
Q ss_pred cccccceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 707 LSFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 707 ~~~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
+.+.+++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3344578999999999999999999999999999875
No 478
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.90 E-value=0.73 Score=54.83 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=33.0
Q ss_pred ccccceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 708 SFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 708 ~~~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
.+...+|.|||+|..|...|..|+++|++|+++|.++
T Consensus 51 ~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 51 AYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3445689999999999999999999999999999864
No 479
>2h8o_A Geranyltranstransferase; geranyltransferase,agrobacterium tumefaciens, structural GEN PSI-2, protein structure initiative; 1.60A {Agrobacterium tumefaciens}
Probab=83.89 E-value=3.6 Score=46.74 Aligned_cols=108 Identities=14% Similarity=0.055 Sum_probs=70.0
Q ss_pred HHHHHHHHhhccCC-CCCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcch---
Q psy10545 1283 FEHLDGFEMDVMER-TYITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDVI--- 1351 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~-~~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~~--- 1351 (1428)
..|+.|...|+... .-.|++++..-.++=.|.+-.+.+.+ + |.+++ ....++.++|.|+|+.|=+-|+.
T Consensus 192 ~~~~~GQ~lDl~~~~~~~~~~~y~~i~~~KTa~L~~~a~~~Ga~laga~~~~~~~l~~~g~~lGlAFQI~DDiLD~~gd~ 271 (335)
T 2h8o_A 192 GGMAGGQALDLAAEKKAPDEDGIITLQAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADA 271 (335)
T ss_dssp TSHHHHHHHHHHHHHSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hHHHHHHHHHHHccCCCCCHHHHHHHHHhchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 46788888888632 24588888877766666554444433 2 43332 24678899999999999888874
Q ss_pred --------hhhcCCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10545 1352 --------DDFYVGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPL 1412 (1428)
Q Consensus 1352 --------~d~~~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~ 1412 (1428)
.|+..|++-+|.= -.+..--+.|+++.++|++.+..+|.
T Consensus 272 ~~~GK~~g~Dl~egK~T~p~l----------------------~~le~a~~~a~~~~~~A~~~L~~l~~ 318 (335)
T 2h8o_A 272 ATMGKATGKDAARGKGTLVAL----------------------RGEAWAREKLQEQVAEASELLAPYGE 318 (335)
T ss_dssp --------------CCCHHHH----------------------HCHHHHHHHHHHHHHHHHHHTGGGGG
T ss_pred HHhCCCcchHHhcCCccHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 4455555555542 23445567788888999999988885
No 480
>1wy0_A Geranylgeranyl pyrophosphate synthetase; pyrococcus horikosh structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii}
Probab=83.68 E-value=4.7 Score=46.15 Aligned_cols=131 Identities=18% Similarity=0.177 Sum_probs=84.0
Q ss_pred HHHHHHHHHhhccCCC--CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcc--
Q psy10545 1282 LFEHLDGFEMDVMERT--YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDV-- 1350 (1428)
Q Consensus 1282 ~~~li~~~~~dl~~~~--~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~-- 1350 (1428)
...++.|..+|+.... -.|++++..-+++=.|.+-.+.+.+ + |.+.. ....++.++|.|+|+.|=+-|+
T Consensus 146 ~~~~~~GQ~~dl~~~~~~~~~~~~y~~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQI~DD~lD~~~ 225 (342)
T 1wy0_A 146 SNELCEGQARDLEFEKKSTVTIEEYMEMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIA 225 (342)
T ss_dssp HHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcccCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4788999999986432 3488888877776666665555543 2 43332 2467889999999999877776
Q ss_pred ---------hhhhcCCceeecHHHHHhcCCCcc------ccccc----------------cchHHHHHHH------HHHH
Q psy10545 1351 ---------IDDFYVGRCYLPLDWLRNEGLNKS------NFVLA----------------ENRKKLFKVV------TRIL 1393 (1428)
Q Consensus 1351 ---------~~d~~~gR~ylP~~~~~~~~~~~~------~~~~~----------------~~~~~~~~~~------~~~~ 1393 (1428)
+.|+..|++-+|.=..-+.. +++ .+... .....+.+.+ ..--
T Consensus 226 d~~~~GK~~g~Dl~egK~Tlp~i~al~~~-~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~g~~~~~~ 304 (342)
T 1wy0_A 226 DEKKLGKPVGSDIRKGKKTLIVAHFFENA-DEKDKQRFLKIFGKYAGDVKGRGIIEEDIKSDVMEAIDLLKKYGSIDYAA 304 (342)
T ss_dssp CHHHHTSCSCHHHHHTCCCHHHHHHHHHC-CHHHHHHHHHTSCC-------------CHHHHHHHHHHHHHHTTHHHHHH
T ss_pred ChhhhCCCchhHHhCCCCcHHHHHHHHhC-CHhHHHHHHHHHcccccccccccccccCCHHHHHHHHHHHHHCCcHHHHH
Confidence 46888899999975443322 111 01111 1111222222 2345
Q ss_pred HHHHHHHHHHHHhhcCCCcc
Q psy10545 1394 DVAEFYYSSSLVKLNTLPLR 1413 (1428)
Q Consensus 1394 ~~A~~~~~~a~~~~~~lp~~ 1413 (1428)
+.+++++++|+..+..+|..
T Consensus 305 ~~~~~~~~~A~~~L~~l~~~ 324 (342)
T 1wy0_A 305 EIAKDMIKKANEALRILPKS 324 (342)
T ss_dssp HHHHHHHHHHHTTGGGSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 67889999999999999854
No 481
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.03 E-value=0.86 Score=52.12 Aligned_cols=35 Identities=20% Similarity=0.032 Sum_probs=31.1
Q ss_pred cceeeecCCCcchHH-HHHHHHhCCCeEEEEccCCC
Q psy10545 711 DKIRIFSGAGIGGIA-LAIRLQTAGISTIILEQRDK 745 (1428)
Q Consensus 711 ~~dViIIGaGiaGLs-AA~~La~~G~~V~VlEa~~~ 745 (1428)
+++|.|||.|-+|++ +|..|+++|++|++.|+++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999997 78899999999999998653
No 482
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=82.86 E-value=0.5 Score=50.65 Aligned_cols=39 Identities=33% Similarity=0.234 Sum_probs=33.0
Q ss_pred CccccccceeeecCCCcchHHHHHHHHhCCCeEEE-EccC
Q psy10545 705 NKLSFFDKIRIFSGAGIGGIALAIRLQTAGISTII-LEQR 743 (1428)
Q Consensus 705 ~~~~~~~~dViIIGaGiaGLsAA~~La~~G~~V~V-lEa~ 743 (1428)
+-..|.+++|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 17 ~~~~m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 17 NLYFQSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CTTGGGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred chhhhcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 33345567899999999999999999999999998 7764
No 483
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=82.60 E-value=35 Score=38.61 Aligned_cols=183 Identities=14% Similarity=-0.005 Sum_probs=103.7
Q ss_pred HHHHHHHHhhhhccccccccCccCcchhhhhhhhhHHHHHHHHHHHHHHHhcCCCC--CcHHHHHHHHHHHHc--CCCHH
Q psy10545 1205 RYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRACIGFKM--KEPAFLALQKIISIH--SFPVH 1280 (1428)
Q Consensus 1205 r~~~~~lYaf~r~~Ddi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~p~~~~l~~~~~~~--~l~~~ 1280 (1428)
..-++-+.++.-.+||+-|....... ..++.+.+.+.+...+..+ ..|+..+|.++.++. ...+.
T Consensus 66 l~~~ak~~~~~~~~DD~~D~~~~~~~-----------ee~~~~~~~l~~~~~~~~p~~~~~~~~~l~d~~~~~~~~~~~~ 134 (337)
T 1ps1_A 66 LDLGVDLMSWFFLFDDLFDGPRGENP-----------EDTKQLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCEGMTPA 134 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTSSGGGGCH-----------HHHHHHHHHHHGGGTSCCCTTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHHHHHhhccCCcCCCCH-----------HHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccCCHH
Confidence 33566778888899999997421111 1233444555544444432 578888888877664 34444
Q ss_pred HH-------HHHHHHHHhhcc---CCCCC-CHHHHHHHHHHHhHHHHHHHHHhh--CCCc-------cchHHHHHHHHHH
Q psy10545 1281 LL-------FEHLDGFEMDVM---ERTYI-TLDETLGYCYHVAGTIGLIIAHLI--GVKE-------KDTLNCARNLGIA 1340 (1428)
Q Consensus 1281 ~~-------~~li~~~~~dl~---~~~~~-t~~~l~~Y~~~vag~vg~~~~~~~--~~~~-------~~~~~~a~~~g~a 1340 (1428)
.. .++++++..... ...++ |++|+..+...+.|.--.+.+..+ |..- +......+..+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~Ea~~~~~~~~P~s~eEYl~~r~~s~g~~~~~~~~~~~~g~~l~~~~~~~p~~~~l~~~~~~i 214 (337)
T 1ps1_A 135 WCARSARHWRNYFDGYVDEAESRFWNAPCDSAAQYLAMRRHTIGVQPTVDLAERAGRFEVPHRVFDSAVMSAMLQIAVDV 214 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHcccccchhhHHHHHHHHcCCCCCHHHHhChHHHHHHHHHHHH
Confidence 43 344445444332 23466 888888877777665433333333 4321 1122455566777
Q ss_pred HHHHHHHhcchhhhcCCce-eecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10545 1341 FQLTNISRDVIDDFYVGRC-YLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKL 1407 (1428)
Q Consensus 1341 ~q~~nilrd~~~d~~~gR~-ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 1407 (1428)
.-|+|=|-........|-+ =.-.-.+.++|++.+ .+.+.+.++++.+.+.+.....-+
T Consensus 215 ~rL~NDl~S~~kE~~~G~~~n~V~~~m~~~g~s~e---------eA~~~v~~~i~~~~~~~~~~~~~l 273 (337)
T 1ps1_A 215 NLLLNDIASLEKEEARGEQNNMVMILRREHGWSKS---------RSVSHMQNEVRARLEQYLLLESCL 273 (337)
T ss_dssp HHHHHHHHTHHHHHHTTCCCSHHHHHHHHHCCCHH---------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHhcCCcchHHHHHHHHcCCCHH---------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777877777777777763 233456777888754 344556666666666665555433
No 484
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.54 E-value=0.69 Score=53.19 Aligned_cols=33 Identities=30% Similarity=0.245 Sum_probs=30.5
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
+++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999873
No 485
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.52 E-value=0.74 Score=52.24 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=30.1
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
+++|.|||+|..|...|..|+++|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 357999999999999999999999999999874
No 486
>2ftz_A Geranyltranstransferase; TM0161, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MLY; 1.90A {Thermotoga maritima}
Probab=82.44 E-value=7.3 Score=43.08 Aligned_cols=116 Identities=17% Similarity=0.207 Sum_probs=73.4
Q ss_pred HHHHHHHHhhccCC-C--CCCHHHHHHHHHHHhHHHHHHHHHh----hCCCccchHHHHHHHHHHHHHHHHHhcchhhhc
Q psy10545 1283 FEHLDGFEMDVMER-T--YITLDETLGYCYHVAGTIGLIIAHL----IGVKEKDTLNCARNLGIAFQLTNISRDVIDDFY 1355 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~-~--~~t~~~l~~Y~~~vag~vg~~~~~~----~~~~~~~~~~~a~~~g~a~q~~nilrd~~~d~~ 1355 (1428)
..++.|...|+... . -.|++++..-+++=.|++-.+.+.+ -|.++.....++.++|.|+|+.|=+.|+..|.+
T Consensus 144 ~~~~~GQ~ldl~~~~~~~~~~~~~y~~i~~~KTa~L~~~~~~~ga~lag~~~~~l~~~g~~lG~aFQI~DD~lD~~~d~~ 223 (284)
T 2ftz_A 144 YXLLLGEAMDVEFERRXMEVSQEMVERMYAFXTGALFAFCFSAPFILXGXDHTXMXLLGEXFGVAFQIYDDLXDILGSFE 223 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhhhhHHHHHhccCcCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhhcCCHH
Confidence 68889999998642 1 4688888887777666665554443 244444567899999999999999899877654
Q ss_pred -CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy10545 1356 -VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPL 1412 (1428)
Q Consensus 1356 -~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~ 1412 (1428)
.|+-. . +|+. ..+--+.-.++.--+.|+++.++|++.+..+|.
T Consensus 224 ~~GK~~--g----------~Dl~--K~T~p~l~~l~~a~~~a~~~~~~A~~~L~~l~~ 267 (284)
T 2ftz_A 224 KVGKDL--G----------KDTE--XVTLVXXVGIQXAREMADXYYEEVLXGIESEGL 267 (284)
T ss_dssp CC-------------------------CHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhCCCc--c----------hhcc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34310 0 1221 111112223445567788888888888888884
No 487
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.33 E-value=0.93 Score=51.67 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=31.5
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
.+++|.|||.|..|...|..|++.|++|++++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4568999999999999999999999999999875
No 488
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=82.27 E-value=0.81 Score=52.35 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=31.2
Q ss_pred cceeeecCCCcchHHHHHHHHhCCC-eEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGI-STIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~-~V~VlEa~~ 744 (1428)
+.+|+|||||-.|.+.|..|++.|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999864
No 489
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=81.92 E-value=0.63 Score=49.76 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=30.1
Q ss_pred eeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 713 IRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 713 dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
+|+|||+|-.|...|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 490
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=81.71 E-value=1.1 Score=53.89 Aligned_cols=35 Identities=23% Similarity=0.199 Sum_probs=32.4
Q ss_pred cceeeecCCCcchHHHHHHHHhC-CC-eEEEEccCCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTA-GI-STIILEQRDK 745 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~-G~-~V~VlEa~~~ 745 (1428)
.++|.|||+|.-|+..|..|+++ |+ +|++++.+..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998764
No 491
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=81.65 E-value=0.89 Score=51.86 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=30.6
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
++|.|||+|.-|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999853
No 492
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=81.26 E-value=0.92 Score=51.49 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=29.6
Q ss_pred ceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 712 KIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 712 ~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
++|.|||+|.-|.+.|..|+++|++|+++.++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 57999999999999999999999999999875
No 493
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=80.95 E-value=1 Score=52.47 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=32.0
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
...+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35689999999999999999999999999999864
No 494
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=80.80 E-value=1 Score=50.95 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=32.3
Q ss_pred ccccceeeecCCCcchHHHHHHHHhCCC-eEEEEccC
Q psy10545 708 SFFDKIRIFSGAGIGGIALAIRLQTAGI-STIILEQR 743 (1428)
Q Consensus 708 ~~~~~dViIIGaGiaGLsAA~~La~~G~-~V~VlEa~ 743 (1428)
.|...+|.|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3445689999999999999999999999 99999986
No 495
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=80.75 E-value=1.1 Score=47.48 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=31.7
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDK 745 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~~ 745 (1428)
...+|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998754
No 496
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=80.63 E-value=0.98 Score=51.44 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=31.0
Q ss_pred cceeeecCCCcchHHHHHHHHhCCC--eEEEEccCC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGI--STIILEQRD 744 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~--~V~VlEa~~ 744 (1428)
+++|+|||+|-.|.+.|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999853
No 497
>3pde_A Farnesyl-diphosphate synthase; isoprenyl diphosphate synthase, structural genomics, PSI, PR structure initiative; HET: IPE; 1.75A {Lactobacillus brevis} PDB: 3m9u_A*
Probab=80.61 E-value=8.4 Score=43.07 Aligned_cols=117 Identities=17% Similarity=0.115 Sum_probs=65.6
Q ss_pred HHHHHHHHhhccCCC-CCCHHHHHHHHHHHhHHHHHHHHHh---h-CCCcc---chHHHHHHHHHHHHHHHHHhcchhhh
Q psy10545 1283 FEHLDGFEMDVMERT-YITLDETLGYCYHVAGTIGLIIAHL---I-GVKEK---DTLNCARNLGIAFQLTNISRDVIDDF 1354 (1428)
Q Consensus 1283 ~~li~~~~~dl~~~~-~~t~~~l~~Y~~~vag~vg~~~~~~---~-~~~~~---~~~~~a~~~g~a~q~~nilrd~~~d~ 1354 (1428)
..|+.|...|+.... -.|++++..-+++=.|.+-.+.+.+ + |.++. ....++.++|.|+|+.+=+-|+..|-
T Consensus 155 ~~m~~GQ~lDl~~~~~~~t~~~y~~i~~~KTg~L~~~a~~~ga~laga~~~~~~~l~~~g~~lGlaFQI~DDiLD~~gd~ 234 (309)
T 3pde_A 155 SGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSP 234 (309)
T ss_dssp TTHHHHHHHHHHTTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hHHHHhHHHHHHccCCCCCHHHHHHHHHhccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 357788888987542 3588888876655555554444433 3 33332 24678899999999999888884432
Q ss_pred c-CCceeecHHHHHhcCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy10545 1355 Y-VGRCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLP 1411 (1428)
Q Consensus 1355 ~-~gR~ylP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp 1411 (1428)
+ .|+- .-+|+.++..+--+.-+++.--+.+++++++|...+..+|
T Consensus 235 ~~~GK~------------~g~Dl~egK~T~p~l~al~~a~~~~~~~~~~a~~~l~~~~ 280 (309)
T 3pde_A 235 AEMGKA------------TQKDADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLP 280 (309)
T ss_dssp ----------------------CTTTSSSHHHHHCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHhCCC------------ccchhhcCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHhh
Confidence 1 1210 0123333333322333444444566666666666666643
No 498
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=80.50 E-value=0.95 Score=54.60 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=31.6
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
.+++|.|||+|.-|+..|..|+++|++|++++.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3578999999999999999999999999999975
No 499
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=80.50 E-value=0.68 Score=51.05 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=31.8
Q ss_pred ccceeeecCCCcchHHHHHHHHhCCCeEEEEccCC
Q psy10545 710 FDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRD 744 (1428)
Q Consensus 710 ~~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~~ 744 (1428)
....|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999998753
No 500
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=80.47 E-value=0.97 Score=52.39 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=30.6
Q ss_pred cceeeecCCCcchHHHHHHHHhCCCeEEEEccC
Q psy10545 711 DKIRIFSGAGIGGIALAIRLQTAGISTIILEQR 743 (1428)
Q Consensus 711 ~~dViIIGaGiaGLsAA~~La~~G~~V~VlEa~ 743 (1428)
+++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999999999999874
Done!