Your job contains 1 sequence.
>psy10545
MNFEKNYYWDFILIGAGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQTVLSSS
QYMLIKPLITYSWPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGQQWNLSSPHGLD
IPIIMDATVNQKNDEYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIKNRW
KLKNIEREEIGSIPIALKNEKIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYS
ITTNQINSTVLFKLVKKFIINHQKKQRFFCMLNRLFFLSNSRCHLDIMQYFYTLPDKIIR
NFYANKLSFFDKIRIFSGAGIGGIALAIRLQTAGISTIILEQRDKLSWINLKFQFGVGYP
NTNQGLWNSIIAWYLKQYNPKLNVLLLELSSSVKNHIWSFHQNDISSSQYMLIKPLITYS
WPSYQVKFPKFNRKIFSGYYSICSKHLNSYLIRALGINNFLFNNKTVEIITPTSIRINNK
KIINANCIIDGRGLKNSQFDGIYQIFLGQQWNLSSPHGLDIPIIMDATVNQKNDEYHFIY
TLPLTPNSLMIEDTRYTKKPFLKIDMLKKSIKDYAIKNRWKLKNIEREEIGSIPIALKNE
KIIKFKKTICVGLRANLLHATTGYSLPIAIQLAENIAKYSITTNQINSTVLFKLVKKFII
NHQKKQRFFCMLNRLFFLSNSRCHLDIMQYFYTLPDKIIRNFYANKLSFFDKIRIFSGAG
IGGIALAIRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLFDLS
KNRMENYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKK
VFKEGYLSFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFI
GGNPFSTSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYVN
NNKVNKVHLKNGQIFDADIIVSNADIINTYRNLLGQYAFGKKKYMNLIKKKMSNSLFVIY
FGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTF
YALIPVPNLSNSSINWSEESIKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGS
YLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIKLF
DPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRACIGFKM
KEPAFLALQKIISIHSFPVHLLFEHLDGFEMDVMERTYITLDETLGYCYHVAGTIGLIIA
HLIGVKEKDTLNCARNLGIAFQLTNISRDVIDDFYVGRCYLPLDWLRNEGLNKSNFVLAE
NRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRSTLAIVTSWSIYREI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10545
(1428 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P21685 - symbol:crtI "Phytoene desaturase (lyco... 1314 2.4e-138 2
UNIPROTKB|P17054 - symbol:crtI "Phytoene desaturase (neur... 724 1.4e-70 1
UNIPROTKB|P54979 - symbol:carA2 "zeta-carotene-forming ph... 541 6.1e-51 1
UNIPROTKB|Q02861 - symbol:carC "All-trans-zeta-carotene d... 462 1.7e-42 1
UNIPROTKB|Q67GI0 - symbol:carB "Phytoene dehydrogenase" s... 433 2.1e-39 1
UNIPROTKB|Q8X0Z0 - symbol:carB "Phytoene dehydrogenase" s... 387 4.8e-38 2
UNIPROTKB|Q6ED64 - symbol:Q6ED64 "Phytoene synthase 1" sp... 203 1.0e-12 1
TAIR|locus:2167225 - symbol:PSY "PHYTOENE SYNTHASE" speci... 194 1.1e-11 1
UNIPROTKB|P37295 - symbol:al-2 "Bifunctional lycopene cyc... 143 2.5e-11 2
UNIPROTKB|Q67GH9 - symbol:carRA "Bifunctional lycopene cy... 192 5.8e-10 2
UNIPROTKB|Q9P854 - symbol:carRA "Bifunctional lycopene cy... 179 9.2e-10 1
ZFIN|ZDB-GENE-061110-141 - symbol:zgc:154169 "zgc:154169"... 172 5.3e-09 1
ZFIN|ZDB-GENE-050506-147 - symbol:pyroxd2 "pyridine nucle... 121 1.3e-08 4
UNIPROTKB|Q0IS25 - symbol:Os11g0572700 "Os11g0572700 prot... 124 4.9e-07 2
TAIR|locus:2033055 - symbol:CRTISO "carotenoid isomerase"... 149 1.6e-06 1
ZFIN|ZDB-GENE-050320-11 - symbol:retsat "retinol saturase... 158 2.0e-06 2
UNIPROTKB|A8J9E9 - symbol:CHLREDRAFT_196597 "Carotenoid i... 116 1.2e-05 2
RGD|1303232 - symbol:Pyroxd2 "pyridine nucleotide-disulph... 113 2.5e-05 4
UNIPROTKB|Q3MHH6 - symbol:PYROXD2 "Pyridine nucleotide-di... 107 4.3e-05 4
UNIPROTKB|Q8N2H3 - symbol:PYROXD2 "Pyridine nucleotide-di... 109 8.1e-05 4
UNIPROTKB|Q9UUQ6 - symbol:CARRP "Bifunctional lycopene cy... 137 0.00021 2
WB|WBGene00018146 - symbol:F37C4.6 species:6239 "Caenorha... 89 0.00025 3
TAIR|locus:2164590 - symbol:LUT2 "LUTEIN DEFICIENT 2" spe... 127 0.00031 1
UNIPROTKB|F1SVB2 - symbol:RETSAT "Uncharacterized protein... 125 0.00064 1
MGI|MGI:1914692 - symbol:Retsat "retinol saturase (all tr... 124 0.00081 1
TAIR|locus:2009395 - symbol:AT1G57770 species:3702 "Arabi... 92 0.00083 2
RGD|61834 - symbol:Fdft1 "farnesyl diphosphate farnesyl t... 121 0.00097 1
UNIPROTKB|E2R6N6 - symbol:FDFT1 "Uncharacterized protein"... 121 0.00097 1
>UNIPROTKB|P21685 [details] [associations]
symbol:crtI "Phytoene desaturase (lycopene-forming)"
species:553 "Pantoea ananatis" [GO:0016120 "carotene biosynthetic
process" evidence=IDA] [GO:0016627 "oxidoreductase activity, acting
on the CH-CH group of donors" evidence=IDA] [GO:0071949 "FAD
binding" evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
InterPro:IPR014105 Pfam:PF01593 InterPro:IPR008150 GO:GO:0005886
GO:GO:0071949 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
GO:GO:0016627 PANTHER:PTHR10668:SF3 TIGRFAMs:TIGR02734
PROSITE:PS00982 EMBL:D90087 PIR:D37802 PDB:4DGK PDBsum:4DGK
ProteinModelPortal:P21685 BioCyc:MetaCyc:MONOMER-15564
GO:GO:0016120 Uniprot:P21685
Length = 492
Score = 1314 (467.6 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
Identities = 246/473 (52%), Positives = 330/473 (69%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLFDLSKNRMENYV 788
RLQ AGI ++LEQRDKPGGRAYVY+ GF FDAGPTVITDP++I+ LF L+ +++ YV
Sbjct: 19 RLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITDPSAIEELFALAGKQLKEYV 78
Query: 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLS 848
LLP+ PFYRL W K NY+++ LE QI +FN D++GYR FL+YS+ VFKEGYL
Sbjct: 79 ELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLK 138
Query: 849 FASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFSTS 908
+ FL+ DML P+L K++AW+SVYS V+ +I++++L+QAFSF+SL +GGNPF+TS
Sbjct: 139 LGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATS 198
Query: 909 SIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXX 968
SIYTLIHALE EWG+WFP+GG GAL++ +IKLFQ+LGG ++LN++V +
Sbjct: 199 SIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVH 258
Query: 969 XXXGQIFDADIIVSNADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFGLSEQYT 1028
G+ F + SNAD+++TYR+LL Q+ MSNSLFV+YFGL+ +
Sbjct: 259 LEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHD 318
Query: 1029 HLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPN 1088
LAHHT+ F Y++ I+ IF + ++ S+YLH+P VTD SLAP GC ++Y L PVP+
Sbjct: 319 QLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPH 378
Query: 1089 LXXXXXXXXXXXXKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSF 1148
L KL++ +F YLEQ+ +P LR +L+T R+FTP DF+D L +Y GSAFS
Sbjct: 379 LGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSV 438
Query: 1149 APLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIKLFD 1201
P+LTQSAWFRPHNRDK +TNLY VGAGTHPGA + GS ++ + L D
Sbjct: 439 EPVLTQSAWFRPHNRDKTITNLYLVGAGTHPGAGIPGV-IGSAKATAGLMLED 490
Score = 61 (26.5 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
Identities = 12/17 (70%), Positives = 14/17 (82%)
Query: 329 RLQTAGISTIILEQRDK 345
RLQ AGI ++LEQRDK
Sbjct: 19 RLQAAGIPVLLLEQRDK 35
>UNIPROTKB|P17054 [details] [associations]
symbol:crtI "Phytoene desaturase (neurosporene-forming)"
species:272942 "Rhodobacter capsulatus SB 1003" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IDA] [GO:0071949 "FAD binding" evidence=IDA]
InterPro:IPR002937 InterPro:IPR014105 Pfam:PF01593
InterPro:IPR008150 GO:GO:0071949 GO:GO:0016117 GO:GO:0015979
EMBL:CP001312 GO:GO:0015995 GO:GO:0016627 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 GO:GO:0016120 EMBL:X52291
EMBL:Z11165 EMBL:J04969 PIR:A32617 RefSeq:YP_003576851.1
ProteinModelPortal:P17054 GeneID:9003508 KEGG:rcp:RCAP_rcc00679
PATRIC:35501426 HOGENOM:HOG000278176 KO:K10027 OMA:GPRYRES
ProtClustDB:CLSK940830 BioCyc:MetaCyc:MONOMER-14931
BioCyc:RCAP272942:GJIY-692-MONOMER Uniprot:P17054
Length = 524
Score = 724 (259.9 bits), Expect = 1.4e-70, P = 1.4e-70
Identities = 161/469 (34%), Positives = 260/469 (55%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLF-DLSKNRMENY 787
RL G ++++ D+PGGR + G FD GPT++T P+ ++ L+ D ++ +
Sbjct: 26 RLGAKGYKVTVVDRLDRPGGRGSSITKGGHRFDLGPTIVTVPDRLRELWADCGRD-FDKD 84
Query: 788 VNLLPIKPFYRL-YWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGY 846
V+L+P++PFY + + EK+ Y D+ K ++ ++A+ + D++G+R F+ +K ++ GY
Sbjct: 85 VSLVPMEPFYTIDFPDGEKYTAYGDDAK-VKAEVARISPGDVEGFRHFMWDAKARYEFGY 143
Query: 847 LSFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFS 906
+ K + D++ +LP ++A +SVY + +K+D+L+ A SF+ LFIGG+PF
Sbjct: 144 ENLGRKPMSKLWDLIKVLPTFGWLRADRSVYGHAKKMVKDDHLRFALSFHPLFIGGDPFH 203
Query: 907 TSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXX 966
+S+Y L+ LE ++G+ + GGV A+ A+ K+ + GG + LN++V I
Sbjct: 204 VTSMYILVSQLEKKFGVHYAIGGVQAIADAMAKVITDQGGEMRLNTEVDEILVSRDGKAT 263
Query: 967 XXXXX-GQIFDADIIVSNADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFGL-- 1023
G A ++VSNAD +TY+ LL S LFV YFG
Sbjct: 264 GIRLMDGTELPAQVVVSNADAGHTYKRLLRNRDRWRWTDEKLDKKRWSMGLFVWYFGTKG 323
Query: 1024 -SEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYA 1082
++ + + HHT+ YK+ +++IF K +++S+Y+H PSVTD + AP G TFY
Sbjct: 324 TAKMWKDVGHHTVVVGPRYKEHVQDIFIKGELAEDMSLYVHRPSVTDPTAAPKGDDTFYV 383
Query: 1083 LIPVPNLXXXXXXX-XXXXXKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSY 1141
L PVPNL K K V +E+ +P + +K+ + +FTP F+D S
Sbjct: 384 LSPVPNLGFDNGVDWSVEAEKYKAKVLKVIEERLLPGVAEKITEEVVFTPETFRDRYLSP 443
Query: 1142 LGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGAA-NKIIKAG 1189
LG+ FS P + QSAWFRPHN + + LY VGAGTHPGA +I +G
Sbjct: 444 LGAGFSLEPRILQSAWFRPHNASEEVDGLYLVGAGTHPGAGVPSVIGSG 492
>UNIPROTKB|P54979 [details] [associations]
symbol:carA2 "zeta-carotene-forming phytoene desaturase"
species:34 "Myxococcus xanthus" [GO:0016117 "carotenoid
biosynthetic process" evidence=IDA] [GO:0016627 "oxidoreductase
activity, acting on the CH-CH group of donors" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
UniPathway:UPA00803 InterPro:IPR002937 InterPro:IPR014105
Pfam:PF01593 InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979
GO:GO:0015995 GO:GO:0016627 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 EMBL:Z21955 PIR:S32169
ProteinModelPortal:P54979 BioCyc:MetaCyc:MONOMER-16379
Uniprot:P54979
Length = 517
Score = 541 (195.5 bits), Expect = 6.1e-51, P = 6.1e-51
Identities = 125/455 (27%), Positives = 222/455 (48%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLFDLSKNRMENYV 788
RL G + E+ PGGR + DGF +D GPT++ P + F R+E+Y+
Sbjct: 25 RLAHQGFDVQVFEKTQGPGGRCNRLQVDGFTWDLGPTIVLMPEVFEETFRAVGRRIEDYL 84
Query: 789 NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLS 848
LL P YR+++ + + + + +++ + Y FL + ++
Sbjct: 85 TLLRCDPNYRVHFRDRSDVTFTSELCAMGRELERVEPGSYARYLAFLAQGRVQYRTSLDH 144
Query: 849 FASKSFLTINDMLF--ILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFS 906
+++ + D L +L ++ +++A + +Y+ VS+F +++ L+ A +F ++++G +P++
Sbjct: 145 LVGRNYAGLRDYLSPRVLARIFQVRAHRRMYADVSRFFQDERLRAAMTFQTMYLGVSPYA 204
Query: 907 TSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXX 966
+ ++Y L+ E GIWFPKGG+ A+ +AL +L + G + V I
Sbjct: 205 SPAVYGLLPFTELGVGIWFPKGGLYAIPQALERLAREEGVRFHYGAPVERILTDGGRTRG 264
Query: 967 XXXXXGQIFDADIIVSNADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFGLSEQ 1026
G++ +AD ++ NAD+ Y LL A ++S +++Y G+ +
Sbjct: 265 VRLEGGEVVEADAVLCNADLPYAYEKLLDPKA---TTLKRKEKLRYTSSGYMLYLGMKRR 321
Query: 1027 YTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPV 1086
Y L HH + F +YK S ++IF D S Y+++P+ TD SLAP G Y L+PV
Sbjct: 322 YPELLHHNVVFGRDYKGSFDDIFEFRVPEDP-SFYVNAPTRTDASLAPEGKDALYVLVPV 380
Query: 1087 PNLXXXXXXXXXXXXKLKNIVFMYLEQYCIPNLRKKL-ITQRIFTPNDFKDVLGSYLGSA 1145
P+ K++ F + + P+L + + +R TP+D+ GS
Sbjct: 381 PH-QHPDLDWKVEGPKVRAKFFARMAELGFPSLESDIEVERRSSTPDDWAGTFNLARGSG 439
Query: 1146 FSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPG 1180
F + TQ FRP N+D + NL+FVGA T PG
Sbjct: 440 FGLSQNFTQIGPFRPSNQDARVKNLFFVGASTQPG 474
>UNIPROTKB|Q02861 [details] [associations]
symbol:carC "All-trans-zeta-carotene desaturase" species:34
"Myxococcus xanthus" [GO:0016117 "carotenoid biosynthetic process"
evidence=IDA] [GO:0016627 "oxidoreductase activity, acting on the
CH-CH group of donors" evidence=IDA] [GO:0055114
"oxidation-reduction process" evidence=IDA] UniPathway:UPA00803
InterPro:IPR006076 InterPro:IPR014105 Pfam:PF01266
InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
GO:GO:0016627 EMBL:M94727 PIR:S35306 ProteinModelPortal:Q02861
BioCyc:MetaCyc:MONOMER-16371 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 Uniprot:Q02861
Length = 529
Score = 462 (167.7 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 115/455 (25%), Positives = 215/455 (47%)
Query: 734 GISTIILEQRDKPGGR--AYVYKQDG-FIFDAGPTVITDPNSIKLLFDLSKNRMENYVNL 790
G ++E+ PGGR G + D GP+++ P ++ +F + R+E+YV L
Sbjct: 31 GFRVTVVEKDAVPGGRMKGLTLGASGEYAVDTGPSILQLPGVLEQIFRRAARRLEDYVKL 90
Query: 791 LPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKVFKEGYLSFA 850
LP+ R+++ L+ ++ +E ++AKF R ++ ++ + Y F
Sbjct: 91 LPLDVNTRVHFWDGTHLDTTRHLDRMEAELAKFGPRQASALRQWMEDGREKYGIAYQKFI 150
Query: 851 SKSFLTINDML-FILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNPFSTSS 909
S + + L ++ K W+++Y + F +D + A ++ S ++G +P + SS
Sbjct: 151 CTSADNLGYYAPWRLAPTLRFKPWQTLYRQLDGFFHDDRVTYALAYPSKYLGLHPTTCSS 210
Query: 910 IYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXXX 969
++++I LE +G+W +GG L + +++ ++LG + + V +
Sbjct: 211 VFSVIPFLELAFGVWHVEGGFRELSRGMMRCARDLGATFRMGTPVEKVRVDAGRAVGVKL 270
Query: 970 XXGQIFDADIIVSNADIINTYRNLLGQYAF-GXXXXXXXXXXXM-SNSLFVIYFGLSEQY 1027
G++ DAD +V NAD+ R+L+ A G S S F+ Y+GL Y
Sbjct: 271 VGGEVLDADAVVVNADLAYAARSLIPAEAREGSRLTDAALERAKYSCSTFMAYYGLDTVY 330
Query: 1028 THLAHHTIFFPSNYKKSIENIF-GKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPV 1086
L HH I+ + +++ + ++ ++ Y+ +P VTD S AP G ST Y L+P
Sbjct: 331 ADLPHHLIYLSESARRTDRDALEDRHVDLEDPPFYVCNPGVTDPSGAPAGHSTLYVLVPT 390
Query: 1087 PNLXXXXXXXXXXXXKLKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAF 1146
PN + I M LE+ + +R+ + +R FT ++D + G+ F
Sbjct: 391 PNTGRPVDWVKTEQALRERIPAM-LEKVGLKGVREHIREERYFTAETWRDDFNVFRGAVF 449
Query: 1147 SFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPGA 1181
+ + Q RP +++++ LYFVG GTHPG+
Sbjct: 450 NLSHTWLQLGPLRPKVKNRDIEGLYFVGGGTHPGS 484
>UNIPROTKB|Q67GI0 [details] [associations]
symbol:carB "Phytoene dehydrogenase" species:4850
"Blakeslea trispora" [GO:0016120 "carotene biosynthetic process"
evidence=IDA] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IDA] InterPro:IPR002937 InterPro:IPR014105 Pfam:PF01593
InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
TIGRFAMs:TIGR02734 PROSITE:PS00982 GO:GO:0016120 EMBL:AY176663
GO:GO:0016166 ProteinModelPortal:Q67GI0 Uniprot:Q67GI0
Length = 582
Score = 433 (157.5 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 113/486 (23%), Positives = 224/486 (46%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLF-DLSKNRMENY 787
RL G ++E+ D GGR DG FD GP++ P + F DL + R+ ++
Sbjct: 23 RLAREGFRVTVVEKNDFSGGRCSFIHHDGHRFDQGPSLYLMPKLFEDAFADLDE-RIGDH 81
Query: 788 VNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKV---FKE 844
++LL Y++++ + ++ ++ ++ + + G+ FL++ K+ +++
Sbjct: 82 LDLLRCDNNYKVHFDDGDAVQLSSDLTKMKGELDR--IEGPLGFGRFLDFMKETHVHYEQ 139
Query: 845 GYLSFASKSFLTINDMLFI--LPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGG 902
G ++F TI D++ + +P++ ++ + +Y S++ + ++ AF+F ++++G
Sbjct: 140 GTFIAIKRNFETIWDLIRLQYVPEIFRLHLFGKIYDRASKYFQTKKMRMAFTFQTMYMGM 199
Query: 903 NPFSTSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLF-QNLGGNLILNSQV--ISIYX 959
+P+ ++Y+L+ E+ GIW+P+GG +++ L + + G S V I+
Sbjct: 200 SPYDAPAVYSLLQYTEFAEGIWYPRGGFNMVVQKLESIASKKYGAEFRYQSPVAKINTVD 259
Query: 960 XXXXXXXXXXXXGQIFDADIIVSNADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVI 1019
G++ +AD +V NAD++ Y +LL + +++S
Sbjct: 260 KDKRVTGVTLESGEVIEADAVVCNADLVYAYHHLLPPCNW---TKKTLASKKLTSSSISF 316
Query: 1020 YFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCST 1079
Y+ +S + L H IF YK+S + IF S Y++ PS D S AP +
Sbjct: 317 YWSMSTKVPQLDVHNIFLAEAYKESFDEIFNDFGLPSEASFYVNVPSRIDESAAPPNKDS 376
Query: 1080 FYALIPVPNLXXXXXXXXXXXX-----KLKNIVFMYLEQYC-IPNLRKKLITQRIFTPND 1133
L+P+ ++ + + +V +E+ + N + + + P+
Sbjct: 377 IIVLVPIGHMKSKTGNSAEENYPELVNRARKMVLEVIERRLGVNNFANLIEHEEVNDPSV 436
Query: 1134 FKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKN--LTNLYFVGAGTHPGAANKIIKAGSK 1191
++ + GS + + Q WFRP +D NL+FVGA THPG I+ AGSK
Sbjct: 437 WQSKFNLWRGSILGLSHDVFQVLWFRPSTKDSTNRYDNLFFVGASTHPGTGVPIVLAGSK 496
Query: 1192 SFSSAI 1197
S +
Sbjct: 497 LTSDQV 502
>UNIPROTKB|Q8X0Z0 [details] [associations]
symbol:carB "Phytoene dehydrogenase" species:5127 "Fusarium
fujikuroi" [GO:0016120 "carotene biosynthetic process"
evidence=IMP] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IMP] InterPro:IPR014105 InterPro:IPR008150 GO:GO:0016117
GO:GO:0015979 GO:GO:0015995 TIGRFAMs:TIGR02734 PROSITE:PS00982
GO:GO:0016120 GO:GO:0016166 EMBL:AJ426418 ProteinModelPortal:Q8X0Z0
Uniprot:Q8X0Z0
Length = 570
Score = 387 (141.3 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 104/367 (28%), Positives = 176/367 (47%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLF-DLSKNRMENY 787
RL AG ILE+ D GGR + DG FD GP+++ P +F DL +
Sbjct: 23 RLAKAGFKVTILEKNDFTGGRCSLIHNDGHRFDQGPSLLLLPRFFHEIFQDLGTSLTAEG 82
Query: 788 VNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQI-AKFNLNDIKGYRLFLNYSKKVFKEGY 846
V LL +P Y +++G ++ ++K I A ++ + Y FL S + ++
Sbjct: 83 VELLKCEPNYNIWFGDGSSFEMSTDLTKMKKAIEAVEGIDGFERYLGFLQESHRHYEVSV 142
Query: 847 LSFASKSFLTINDMLF--ILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGGNP 904
S ++F +I + +L L I +S+++ S++ + L++ F+F S+++G +P
Sbjct: 143 ESVLRRNFPSILSLARPEVLFNLFNIHPLESIWTRASKYFWTERLRRVFTFGSMYMGMSP 202
Query: 905 FSTSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQV--ISIYXXXX 962
F Y+L+ E GI +P+GG +++AL+ + Q LG L++ V ISI
Sbjct: 203 FDAPGTYSLLQYTELAEGILYPRGGFHKVVEALVNVGQRLGVEYRLSTGVKSISIDQATG 262
Query: 963 XXXXXXXXXGQIFDADIIVSNADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFG 1022
G +DI++SNAD++ TY NLL + ++ S S Y+
Sbjct: 263 KANGVVLSDGTHLPSDIVISNADLVYTYNNLLPKTSYADSLSKRET----SCSSISFYWS 318
Query: 1023 LSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYA 1082
S+ L H IF Y++S ++IF ++ S Y++ PS D S AP G +
Sbjct: 319 ASKIVPELNAHNIFLADEYQESFDSIFKEHLIPSEPSFYVNVPSRIDPSAAPEGKDSIVV 378
Query: 1083 LIPVPNL 1089
L+PV +L
Sbjct: 379 LVPVGHL 385
Score = 94 (38.1 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 26/81 (32%), Positives = 35/81 (43%)
Query: 1117 PNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAG 1176
P + ++I F G+ LG + S +L FRP + NLYF GA
Sbjct: 436 PLIENEIINTPFTWQEKFNLDKGAILGLSHSIMNVLA----FRPGTQHSKYKNLYFAGAS 491
Query: 1177 THPGAANKIIKAGSKSFSSAI 1197
THPG + AGSK + I
Sbjct: 492 THPGTGVPVCIAGSKIVAEQI 512
>UNIPROTKB|Q6ED64 [details] [associations]
symbol:Q6ED64 "Phytoene synthase 1" species:39946 "Oryza
sativa Indica Group" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002060 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016117 GO:GO:0016767
EMBL:AY445521 ProteinModelPortal:Q6ED64 STRING:Q6ED64
Gramene:Q6ED64 Uniprot:Q6ED64
Length = 421
Score = 203 (76.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 68/251 (27%), Positives = 113/251 (45%)
Query: 1184 KIIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHK 1243
+I + +K+F L R + +Y WCR D+++D G + + + + +
Sbjct: 135 EICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVD----GPNASHITPSALDRWE 190
Query: 1244 LKILRIKTKRACIGFKMKEPAFLALQKIISIHSFPVHLLFEHLDGFEMDVMERTYITLDE 1303
++ + T R + M + A L IS + + ++G D+ + Y DE
Sbjct: 191 KRLDDLFTGRP---YDMLDAA---LSDTISKSPIDIQPFRDMIEGMRSDLRKTRYKNFDE 244
Query: 1304 TLGYCYHVAGTIGLIIAHLIGV--KEKDTL----NCARNLGIAFQLTNISRDVIDDFYVG 1357
YCY+VAGT+GL+ ++G+ + K T + A LGIA QLTNI RDV +D G
Sbjct: 245 LYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRG 304
Query: 1358 RCYLPLDWLRNEGLNKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRSTLA 1417
R YLP D L GL+ + K + R + A ++ + + L S
Sbjct: 305 RIYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFEEAERGVTELSQASRWP 364
Query: 1418 IVTSWSIYREI 1428
+ S +YR+I
Sbjct: 365 VWASLLLYRQI 375
>TAIR|locus:2167225 [details] [associations]
symbol:PSY "PHYTOENE SYNTHASE" species:3702 "Arabidopsis
thaliana" [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA;IMP] [GO:0016767 "geranylgeranyl-diphosphate
geranylgeranyltransferase activity" evidence=ISS;TAS] [GO:0046905
"phytoene synthase activity" evidence=TAS] [GO:0006636 "unsaturated
fatty acid biosynthetic process" evidence=RCA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0010287
"plastoglobule" evidence=IDA] InterPro:IPR002060 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 EMBL:CP002688
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0010287
GO:GO:0016117 GO:GO:0016767 GO:GO:0046905 IPI:IPI00938978
RefSeq:NP_001154715.1 UniGene:At.23726 ProteinModelPortal:F4KGX7
SMR:F4KGX7 PRIDE:F4KGX7 EnsemblPlants:AT5G17230.3 GeneID:831587
KEGG:ath:AT5G17230 KO:K02291 OMA:ELKLYCY Uniprot:F4KGX7
Length = 437
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 64/230 (27%), Positives = 104/230 (45%)
Query: 1206 YKV-LMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLKILRIKTKRACIGFKMKEPA 1264
YK ++ WCR D+++D G + + + + ++ + R F M + A
Sbjct: 173 YKQSIVALVWCRRTDELVD----GPNASHITPMALDRWEARLEDLFRGRP---FDMLDAA 225
Query: 1265 FLALQKIISIHSFPVHLLFEHLDGFEMDVMERTYITLDETLGYCYHVAGTIGLIIAHLIG 1324
L ++ + + + ++G MD+ + Y D+ YCY+VAGT+GL+ ++G
Sbjct: 226 ---LADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMG 282
Query: 1325 V--KEKDTL----NCARNLGIAFQLTNISRDVIDDFYVGRCYLPLDWLRNEGLNKSNFVL 1378
+ K K T N A LGIA QLTNI RDV +D GR YLP D L GL+ +
Sbjct: 283 IDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFA 342
Query: 1379 AENRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRSTLAIVTSWSIYREI 1428
+ K + L A ++ + + L S + S +YR I
Sbjct: 343 GKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRI 392
>UNIPROTKB|P37295 [details] [associations]
symbol:al-2 "Bifunctional lycopene cyclase/phytoene
synthase" species:367110 "Neurospora crassa OR74A" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872
GO:GO:0016117 EMBL:AABX02000002 GO:GO:0045436 TIGRFAMs:TIGR03462
eggNOG:COG1562 GO:GO:0016767 GO:GO:0046905 EMBL:L27652
EMBL:BX842641 PIR:A53583 RefSeq:XP_965725.2 UniGene:Ncr.25908
ProteinModelPortal:P37295 STRING:P37295
EnsemblFungi:EFNCRT00000000733 GeneID:3881954 KEGG:ncr:NCU00585
OrthoDB:EOG4HQHST BioCyc:MetaCyc:MONOMER-16129 Uniprot:P37295
Length = 602
Score = 143 (55.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 1302 DETL-GYCYHVAGTIG-----LIIAHLI----GVKEKDTLNCARNLGIAFQLTNISRDVI 1351
D+ L Y +VAGT+G LII H + ++++ A +GIA Q NI+RD++
Sbjct: 427 DKDLENYAIYVAGTVGELCIALIIYHCLPDMSDTQKRELETAACRMGIALQYVNIARDIV 486
Query: 1352 DDFYVGRCYLPLDWLRNEGL-NKSNFVLAENRKKLFKVVTRILDVAEFYYSSSLVKLNTL 1410
D +GR YLP WL+ EGL +K E + + ++ R+L+ A Y + ++ +
Sbjct: 487 VDARIGRVYLPTTWLKKEGLTHKMVLENPEGPEVIERMRRRLLENAFELYGGARPEMQRI 546
Query: 1411 P 1411
P
Sbjct: 547 P 547
Score = 103 (41.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 1186 IKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKLK 1245
++ S+SF A LF +R +++LY++CR DD++D+ +R + L + H L
Sbjct: 291 LRLKSRSFYLANSLFSGRLRIDLILLYSFCRLADDLVDD--AKSRREVLSWTAKLNHFLD 348
Query: 1246 IL----------RIKTKRACIGFKMKEP--AFLALQKIISIHSFPVHLLFEHLDGFEMDV 1293
+ + K +R K P A+ AL ++ H P L++ + GFEMD
Sbjct: 349 LHYKDADATEDPKKKAERIDAYIKTAFPPCAYQALH-LLPTHILPPKPLYDLIKGFEMDS 407
Query: 1294 MERTYITLDET 1304
+ T D T
Sbjct: 408 QFTFHGTSDST 418
Score = 43 (20.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 1123 LITQRIFTPNDFKDVL-GSYLGSAFSFAPLLTQSAWFRPHNRDKNLTNLYFVGAGT 1177
L+ I P D++ G + S F+F + P DK+L N AGT
Sbjct: 385 LLPTHILPPKPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGT 440
Score = 40 (19.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 789 NLLPIKPFYRLYWGKEK-----FLNYEDNIKDLEKQIAKFNLNDIKGYRLFL 835
++LP KP Y L G E F D+ DL+ IA + D++ Y +++
Sbjct: 389 HILPPKPLYDLIKGFEMDSQFTFHGTSDST-DLQYPIA--DDKDLENYAIYV 437
>UNIPROTKB|Q67GH9 [details] [associations]
symbol:carRA "Bifunctional lycopene cyclase/phytoene
synthase" species:4850 "Blakeslea trispora" [GO:0016120 "carotene
biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 EMBL:AY176662 EMBL:AY176663
EMBL:AY884174 ProteinModelPortal:Q67GH9 GO:GO:0016767 GO:GO:0046905
Uniprot:Q67GH9
Length = 608
Score = 192 (72.6 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 57/198 (28%), Positives = 100/198 (50%)
Query: 1185 IIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKL 1244
I++ SKSF +A +F +R + +LYA+CR DD+ D++ + + + +++ +
Sbjct: 295 ILRKASKSFYTASAVFPSYVRQDLGVLYAFCRATDDLCDDESKSVQERRDQLDLTRQFVR 354
Query: 1245 KILRIKTKRAC-IGFKMKE---PA--FLALQKIISI-HSFPVHLLFEHLDGFEMDVMERT 1297
+ KT I +++ + PA A + + H V + E LDG++ D+ R
Sbjct: 355 DLFSQKTSAPIVIDWELYQNQLPASCISAFRAFTRLRHVLEVDPVEELLDGYKWDLERRP 414
Query: 1298 YITLDETLGYCYHVAGTIGLIIAHLI---GVKEKDT--LNCARNLGIAFQLTNISRDVID 1352
+ + Y VA ++G + +I KE D ++ AR +G+ Q NI+RD++
Sbjct: 415 ILDEQDLEAYSACVASSVGEMCTRVILAQDQKENDAWIIDRAREMGLVLQYVNIARDIVT 474
Query: 1353 DFY-VGRCYLPLDWLRNE 1369
D +GRCYLP WLR E
Sbjct: 475 DSETLGRCYLPQQWLRKE 492
Score = 39 (18.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 135 EYHFIYTLPL 144
E+H YTLP+
Sbjct: 8 EFHLYYTLPV 17
Score = 39 (18.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 535 EYHFIYTLPL 544
E+H YTLP+
Sbjct: 8 EFHLYYTLPV 17
>UNIPROTKB|Q9P854 [details] [associations]
symbol:carRA "Bifunctional lycopene cyclase/phytoene
synthase" species:763407 "Phycomyces blakesleeanus NRRL 1555(-)"
[GO:0016120 "carotene biosynthetic process" evidence=IMP]
[GO:0016767 "geranylgeranyl-diphosphate geranylgeranyltransferase
activity" evidence=IMP] [GO:0045436 "lycopene beta cyclase
activity" evidence=IMP] [GO:0046905 "phytoene synthase activity"
evidence=IMP] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767 GO:GO:0046905
EMBL:AJ278287 EMBL:AJ276965 ProteinModelPortal:Q9P854
Uniprot:Q9P854
Length = 602
Score = 179 (68.1 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 67/267 (25%), Positives = 123/267 (46%)
Query: 1184 KIIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICG--NRSK-------FL 1234
+I++ S SF +A +F R + +LY +CR DD+ DN +R K F+
Sbjct: 289 RILREASASFYTASSVFSFEARQDLGVLYGFCRATDDLADNNDVSVPDRKKQLELVRGFV 348
Query: 1235 KKNVSMKHKLKILRIKTKRACI--GFKMKEPAFLALQKIISIHSFPVHLLFEHLDGFEMD 1292
++ KH + I F +F L+ ++ I + E LDG+ D
Sbjct: 349 RQMFDSKHGHPDIDWTQYSGSIPDSFIAAFRSFTRLRDVLEIKAVE-----ELLDGYTFD 403
Query: 1293 VMERTYITLDETLGYCYHVAGTIGLIIAHLIGVKE--------KDTLNCARNLGIAFQLT 1344
+ +R D+ + Y VA ++G + ++ E K T+ AR++G+A QLT
Sbjct: 404 LEQREVKNEDDLVYYSACVASSVGEMCTRVLMASEPGGNRTMLKWTVERARDMGLALQLT 463
Query: 1345 NISRDVIDDF-YVGRCYLPLDWLRNE--GLNKSNFVLAENRKKLFKVVTRILDVAEFYYS 1401
NI+RD++ D +GR Y+P DWL ++ L K+ ++L ++ +++ A+
Sbjct: 464 NIARDIVTDSKQLGRSYVPRDWLTSQESALLKAGKARELGDERLRQIALKMVYTADDLNL 523
Query: 1402 SSLVKLNTLPLRSTLAIVTSWSIYREI 1428
+ ++ LP S + + ++Y I
Sbjct: 524 MASRAIDYLPPSSRCGVRAACNVYTAI 550
>ZFIN|ZDB-GENE-061110-141 [details] [associations]
symbol:zgc:154169 "zgc:154169" species:7955 "Danio
rerio" [GO:0055114 "oxidation-reduction process" evidence=IBA]
[GO:0051786 "all-trans-retinol 13,14-reductase activity"
evidence=IBA] [GO:0042572 "retinol metabolic process" evidence=IBA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IBA]
ZFIN:ZDB-GENE-061110-141 GO:GO:0005789 GO:GO:0042572 eggNOG:COG1233
GeneTree:ENSGT00390000017613 HOGENOM:HOG000233930
HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN GO:GO:0051786
EMBL:BX936386 EMBL:BC125971 IPI:IPI00817843 RefSeq:NP_001071261.1
UniGene:Dr.104319 Ensembl:ENSDART00000102690 GeneID:777751
KEGG:dre:777751 InParanoid:A0JMQ8 OMA:KDTREPL NextBio:20924309
Uniprot:A0JMQ8
Length = 607
Score = 172 (65.6 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 86/370 (23%), Positives = 147/370 (39%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVI---TDPNSIKLLFDLSKNR--- 783
L G ++LEQ D+ GG + + + GF FD G I D + L D N
Sbjct: 81 LAKVGKKVLVLEQHDRAGGCCHTFTEQGFEFDVGIHYIGELLDHTPFRCLIDQMTNGQLQ 140
Query: 784 ---MENYVNLLPIKP-----FYRLYWGKEKFLN-YEDNIKDLEKQIAKFNLNDIKGYRLF 834
+EN + + I P Y +Y G++++++ + EK I KF RL
Sbjct: 141 WDPLENPFDKVVIGPPKNRRIYPIYSGRKRYMDELKKCFPGEEKAIDKF-------VRLC 193
Query: 835 LNYSKKVFKEGYLSFASKSFLTINDMLFILPKLIKIKAW--KSVYSIVSQFIKNDYLKQA 892
+ ++ L A F + +L ++ +S+ +V++ +N L+
Sbjct: 194 EKVAPGIWFMVLLKLAPAPFAKFLVRTGLASRLTSFFSYASRSLKDVVNELTQNKDLRAV 253
Query: 893 FSFNSLFIGGNPFSTS-SIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILN 951
S+ L G P S S+++++ + G W+PKGG + +I + + GG +++
Sbjct: 254 LSYIFLTYGNIPKEASFSMHSIL-VCHFMNGAWYPKGGASEIAYHMIPIIEKAGGAVLVR 312
Query: 952 SQVISIYXXXXXXXXXXXXX-GQI---FDADIIVSNADIINTYRNLLG---QYAFGXXXX 1004
+ V I GQ A I++S+A I NTY +LL Q
Sbjct: 313 APVNRILLNDAKEAIGVSVLKGQEEVHVRAPIVISDAGIFNTYEHLLPKDVQTMPAIQKQ 372
Query: 1005 XXXXXXXMSN-SLFVIYFGLSEQYTHLAHHTIFFPSNYKKSIENIFGKNFSRDNLS---- 1059
S S+F+ G E+ A + FP N + + K D+
Sbjct: 373 LSMLKHGESGLSIFIGLNGTKEELELKADNFYVFPENNFDELFEAYRKGNREDSAKKLPV 432
Query: 1060 IYLHSPSVTD 1069
I++ SPS D
Sbjct: 433 IFVASPSAKD 442
>ZFIN|ZDB-GENE-050506-147 [details] [associations]
symbol:pyroxd2 "pyridine nucleotide-disulphide
oxidoreductase domain 2" species:7955 "Danio rerio" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] ZFIN:ZDB-GENE-050506-147
CTD:84795 HOGENOM:HOG000238954 EMBL:BC091832 IPI:IPI00497804
RefSeq:NP_001243145.1 UniGene:Dr.41107 ProteinModelPortal:Q58EN1
GeneID:553066 KEGG:dre:553066 HOVERGEN:HBG057345 InParanoid:Q58EN1
ArrayExpress:Q58EN1 Uniprot:Q58EN1
Length = 571
Score = 121 (47.7 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 1046 ENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGC---STFYALIPVPNLXXXXXXXXXXXXK 1102
E G+ SR + + + PSV D +LAP GC S F P L +
Sbjct: 412 EGQHGRPSSRPMIEMTI--PSVLDPTLAPPGCHVVSLFIQFTPYL-LEGRRAWTDEDKER 468
Query: 1103 LKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRP-- 1160
+ VF ++E+Y P + ++ + I TP D + V G G+ F + L Q RP
Sbjct: 469 FGDTVFDWVERYA-PGFKASIVGKDILTPADLERVFGLTGGNIFHGSMSLDQLYLARPLP 527
Query: 1161 --HNRDKNLTNLYFVGAGTHPGAANKIIKAGSKSFSSAIKL 1199
+ + LY G+G+HPG G+ +SSA+++
Sbjct: 528 SIADYRSPVKGLYLCGSGSHPGGG----VMGAAGWSSALRV 564
Score = 86 (35.3 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 30/128 (23%), Positives = 63/128 (49%)
Query: 879 IVSQFIKNDYLKQAFSFNSLFIGGN--PFSTSSIYTLIH----ALEYEWGIW-FPKGGVG 931
+++++ +++ L + +S+ IG N P + S Y L+H LE E G W + +GG+G
Sbjct: 220 VLNRWFESEPLIATLATDSV-IGANTSPNNPGSGYVLLHHVMGELEKEKGSWGYVEGGMG 278
Query: 932 ALIKALIKLFQNLGGNLILNSQVISIYXX-XXXXXXXXXXXGQIFDADIIVSNADIINTY 990
+ +++ + ++LG ++ N+ V + G + +++SNA T+
Sbjct: 279 GVPQSIARSARSLGADIFTNTDVEQVLIGPDGSAKGVVLTDGTEVHSKVVLSNATPHVTF 338
Query: 991 RNLLGQYA 998
+ L Q A
Sbjct: 339 KRLTPQDA 346
Score = 63 (27.2 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYKQ--DGFIFDAGPTVIT--DPNSIKLLFDLSKNRME 785
LQ G+ T +LE+R GG A V ++ GF F +++ P+ + L +L K+ ++
Sbjct: 43 LQKGGLRTAVLERRHVLGGAA-VSEEIIPGFHFSRASYLLSLLRPHIYQDL-ELKKHGLK 100
Query: 786 NYV-NLLPIKPFYRLYWGKE--KFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNY 837
Y+ + P G + L ++ + ++I KF+ D K Y FL Y
Sbjct: 101 VYMRDPYSFTPMLEDGVGGRPPRSLLLGSDLTNTRQEIGKFSEKDAKVYPDFLRY 155
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 330 LQTAGISTIILEQRDKL 346
LQ G+ T +LE+R L
Sbjct: 43 LQKGGLRTAVLERRHVL 59
Score = 37 (18.1 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 9 WDFILIGAGLWNSIIAW-YLKQ 29
+D ++IGAG N +IA YL++
Sbjct: 25 YDAVIIGAG-HNGLIASAYLQK 45
>UNIPROTKB|Q0IS25 [details] [associations]
symbol:Os11g0572700 "Os11g0572700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:AP008217
GO:GO:0016117 KO:K09835 ProtClustDB:CLSN2680687 GO:GO:0046608
PANTHER:PTHR10668:SF30 RefSeq:NP_001068127.1 UniGene:Os.69031
STRING:Q0IS25 PRIDE:Q0IS25 GeneID:4350758 KEGG:osa:4350758
Gramene:Q0IS25 Uniprot:Q0IS25
Length = 602
Score = 124 (48.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 75/359 (20%), Positives = 128/359 (35%)
Query: 873 WKSVYSIVSQFIKNDYLKQAFSFNSLFIGG-NPFSTSSIY-TLIHALEYEWGIWFPKGGV 930
WK+ I +FIK+ L + N T I +++ + GI +P GGV
Sbjct: 253 WKNAGDIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGV 312
Query: 931 GALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXXXXXGQIFDADIIVSNADIINTY 990
G + +L + G + + V ++ G+ F A ++SNA +T+
Sbjct: 313 GGIAMSLADGLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDTF 372
Query: 991 RNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFGLSEQYTHL---AHHTIFFPSNYKKSIEN 1047
LL + S I+ G+ HH F + ++E
Sbjct: 373 GKLLKVEELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPADTDCHH--FVLEDDWANLEK 430
Query: 1048 IFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLXXXXXXXXXXXXKLKNIV 1107
+G SI+L P+V D SLAP G + + + K K +V
Sbjct: 431 PYG--------SIFLSIPTVLDPSLAPEGHHILH-IFTTAGIEDWEGLSRKDYEKKKELV 481
Query: 1108 ----FMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNR 1163
LE+ P L+ ++ + + +P + L G+ + P N
Sbjct: 482 ATEIIKRLEKKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNT 541
Query: 1164 DKNLTNLYFVGAGTHPG------AANKIIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCR 1216
++ LY VG PG A + I+ A + ++ PV+ +L L W R
Sbjct: 542 T-SIDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQRSPVLDAGLLGLLRWLR 599
Score = 81 (33.6 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVI---TDPNSIKLL 776
+L G ++LE+ PGG + Y++DGF FD G +V+ +D ++ L+
Sbjct: 141 QLAAKGARVLVLEKYVIPGGSSGYYRRDGFTFDVGSSVMFGFSDKGNLNLI 191
>TAIR|locus:2033055 [details] [associations]
symbol:CRTISO "carotenoid isomerase" species:3702
"Arabidopsis thaliana" [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IBA;TAS]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IGI;TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0009662 "etioplast organization"
evidence=IMP] [GO:0046608 "carotenoid isomerase activity"
evidence=IGI;IMP] UniPathway:UPA00803 InterPro:IPR014101
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0031969
GO:GO:0016117 EMBL:AC011001 EMBL:BX813870 IPI:IPI00534972
PIR:A86203 RefSeq:NP_172167.2 UniGene:At.47600 UniGene:At.51507
UniGene:At.67219 ProteinModelPortal:Q9M9Y8 SMR:Q9M9Y8 STRING:Q9M9Y8
PaxDb:Q9M9Y8 PRIDE:Q9M9Y8 EnsemblPlants:AT1G06820.1 GeneID:837193
KEGG:ath:AT1G06820 TAIR:At1g06820 eggNOG:COG1233
HOGENOM:HOG000150223 InParanoid:Q9M9Y8 KO:K09835 OMA:AVGRKME
PhylomeDB:Q9M9Y8 ProtClustDB:CLSN2680687
BioCyc:ARA:AT1G06820-MONOMER BioCyc:MetaCyc:AT1G06820-MONOMER
Genevestigator:Q9M9Y8 GermOnline:AT1G06820 GO:GO:0046608
GO:GO:0009662 PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730
Uniprot:Q9M9Y8
Length = 595
Score = 149 (57.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 104/495 (21%), Positives = 185/495 (37%)
Query: 708 SFFDKIRIFSXXXXXXXXXXXRLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVI 767
S +D I I S ++ A + ++LE+ PGG + Y++DG+ FD G +V+
Sbjct: 76 SLYDAIVIGSGIGGLVAATQLAVKEARV--LVLEKYLIPGGSSGFYERDGYTFDVGSSVM 133
Query: 768 ---TDPNSIKLLFDLSKNRMENYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQI-AKF 823
+D ++ L+ K + + ++P + + D ++ +KF
Sbjct: 134 FGFSDKGNLNLITQALK-AVGRKMEVIPDPTTVHFHLPNNLSVRIHREYDDFIAELTSKF 192
Query: 824 NLNDIKGYRLFLNYSKKVFKEGYLSFASKSFLTINDMLFILPKLIK--IKAWKSVYSIVS 881
++ +G F K+F S S ++ + +++ + + ++ Y +
Sbjct: 193 P-HEKEGILGFYGDCWKIFN----SLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQ 247
Query: 882 QF--IKNDYLK--QAFSF--NSLFIGG--NPFSTSSIY-TLIHALEYEWGIWFPKGGVGA 932
I Y+K Q SF FI N T I +++ + GI +P GGVG
Sbjct: 248 NAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGVGG 307
Query: 933 LIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXXXXXGQIFDADIIVSNADIINTYRN 992
+ K+L + + G + + V SI G+ F A I+SNA +T+
Sbjct: 308 IAKSLAEGLVDQGSEIQYKANVKSIILDHGKAVGVRLADGREFFAKTIISNATRWDTFGK 367
Query: 993 LLGQYAFGXXXXXXXXXXXMSNSLFVIYFGLSEQYTHL---AHHTIFFPSNYKKSIENIF 1049
LL + S I+ G+ + HH F + K++E +
Sbjct: 368 LLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHH--FVLEDDWKNLEEPY 425
Query: 1050 GKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIPVPNLXXXXXXXXXXXXKLKNI--- 1106
G SI+L P++ D SLAP G + K +++
Sbjct: 426 G--------SIFLSIPTILDSSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKEDVAAR 477
Query: 1107 VFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWF-RPHNRDK 1165
+ LE+ P L + + + TP + L G+ + P T P N
Sbjct: 478 IIQRLEKKLFPGLSSSITFKEVGTPRTHRRFLARDKGT-YGPMPRGTPKGLLGMPFNTTA 536
Query: 1166 NLTNLYFVGAGTHPG 1180
+ LY VG PG
Sbjct: 537 -IDGLYCVGDSCFPG 550
>ZFIN|ZDB-GENE-050320-11 [details] [associations]
symbol:retsat "retinol saturase (all-trans-retinol
13,14-reductase)" species:7955 "Danio rerio" [GO:0042572 "retinol
metabolic process" evidence=IBA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IBA] [GO:0051786 "all-trans-retinol
13,14-reductase activity" evidence=IEA;IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] ZFIN:ZDB-GENE-050320-11 GO:GO:0005789 GO:GO:0042572
eggNOG:COG1233 EMBL:BC078372 EMBL:BC090469 IPI:IPI00495382
RefSeq:NP_001015061.1 UniGene:Dr.80063 ProteinModelPortal:Q5BLE8
STRING:Q5BLE8 Ensembl:ENSDART00000013167 GeneID:325922
KEGG:dre:325922 CTD:54884 GeneTree:ENSGT00390000017613
HOGENOM:HOG000233930 HOVERGEN:HBG079484 InParanoid:Q5BLE8 KO:K09516
OMA:IHYIGEM OrthoDB:EOG4R23TN NextBio:20809552 Bgee:Q5BLE8
GO:GO:0051786 Uniprot:Q5BLE8
Length = 607
Score = 158 (60.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 80/341 (23%), Positives = 148/341 (43%)
Query: 677 FLSNSRCHLDIMQYFYTLPDKIIRN-FYANKL-SFFDKIRIFSXXXXXXXXXXXRLQTAG 734
F ++R L M + L +K+++ F A+++ D + + S L G
Sbjct: 28 FAIDTREPLKPMVFDRKLKNKVLKQGFLASRVPEDLDAVVVGSGIGGLAIAVL--LAKVG 85
Query: 735 ISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNS---IKLLFDLSKNR------ME 785
++LEQ D+ GG + +K+ GF FD G I + ++ ++ + D N +E
Sbjct: 86 KKVLVLEQHDRAGGCCHTFKEQGFEFDVGIHYIGELSNHKPLRCIIDQMTNGQLQWDPLE 145
Query: 786 NYVNLLPIKP-----FYRLYWGKEKFLN-YEDNIKDLEKQIAKF-NLNDIKGYRLFLNYS 838
N + + I P Y++Y G++++++ + EK I ++ L G +++
Sbjct: 146 NPFDNVVIGPPENRRIYQIYSGRKRYMDELKKCFPGEEKAIDEYVRLCKEVGQGVWVMVL 205
Query: 839 KKVFKEGYLSFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSL 898
K +L +FL + L + A +S+ +V++ +N L+ S+
Sbjct: 206 LK-----FLPTPIANFLVRTGLANRLTSFSRY-ASRSLTDVVNELTQNKDLRAVLSYIFG 259
Query: 899 FIGGNPFSTS-SIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISI 957
G P S S+++LI Y G W+PKGG + +I + + GG +++ + V I
Sbjct: 260 TYGKIPKEASFSMHSLI-VNHYMNGAWYPKGGATEIAYHMIPIIEKAGGAVLVRAPVNRI 318
Query: 958 YXXXXXXXXXXXXX-GQI---FDADIIVSNADIINTYRNLL 994
GQ A I++S+A I NTY LL
Sbjct: 319 LLNDAKEAIGVSVLKGQEEVHVRAPIVISDAGIFNTYEYLL 359
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 1219 DDVIDNQICGNRSKFLKKN 1237
D+++++ GNR + KKN
Sbjct: 412 DELLEDYRSGNREESAKKN 430
>UNIPROTKB|A8J9E9 [details] [associations]
symbol:CHLREDRAFT_196597 "Carotenoid isomerase"
species:3055 "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 ProtClustDB:CLSN2680687 GO:GO:0046608 GO:GO:0009662
PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730 EMBL:DS496146
RefSeq:XP_001698231.1 ProteinModelPortal:A8J9E9 STRING:A8J9E9
PRIDE:A8J9E9 EnsemblPlants:EDO99516 GeneID:5723787
KEGG:cre:CHLREDRAFT_196597 Uniprot:A8J9E9
Length = 568
Score = 116 (45.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 66/284 (23%), Positives = 110/284 (38%)
Query: 922 GIWFPKGGVGALIKALIKLFQNLGGNLILNSQVISIYXX-----XXXXXXXXXXXGQIFD 976
GI +P GGVG + + L + GG ++ + V I G++F
Sbjct: 290 GINYPVGGVGRIGEELAAGIEEYGGKIVYKANVKEILLSPQPDGSQRATGVRLADGRVFK 349
Query: 977 ADIIVSNADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFGLSEQYTHL---AHH 1033
++SNA +T+ L+G+ S S F I+ G+ Q HH
Sbjct: 350 GKTVISNATRWDTFEGLIGKDKLPESEQLFRKRFKKSPSFFSIHMGVKAQVLEGEKDCHH 409
Query: 1034 TIFFPSNYKKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIP--VPNLXX 1091
+ ++ K +E G F +S+ P+V D SLAP G +A +P + +
Sbjct: 410 IVL--EDWAK-MEKARGVLF----VSL----PTVLDPSLAPPGNHIVHAFVPDWIEDWQG 458
Query: 1092 XXXXXXXXXXK-LKNIVFMYLEQYCIPNLRKKLITQRIFTPNDFKDVL----GSYLGSAF 1146
+ + + + L+ +P L + + + TP + L G+Y G
Sbjct: 459 LSVEEYEAKKEAVADDICRRLDAI-LPGLSSNITFREVGTPRTHRRFLNREDGTY-GPIP 516
Query: 1147 SFAPLLTQSAWFRPHNRDKNLTNLYFVGAGTHPG-AANKIIKAG 1189
S PL S P N ++ LY VG PG N ++ +G
Sbjct: 517 SRRPLGMLSM---PFNTT-DIPGLYCVGDSAFPGQGVNAVVFSG 556
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 729 RLQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVI 767
RL G ++LE+ PGG A +K++G+ FD G +++
Sbjct: 82 RLVAKGAKVVVLEKYLLPGGSAAHFKREGYTFDVGSSMM 120
>RGD|1303232 [details] [associations]
symbol:Pyroxd2 "pyridine nucleotide-disulphide oxidoreductase
domain 2" species:10116 "Rattus norvegicus" [GO:0016491
"oxidoreductase activity" evidence=IEA] RGD:1303232 GO:GO:0016491
eggNOG:COG1233 CTD:84795 HOGENOM:HOG000238954 OrthoDB:EOG4WM4TG
OMA:HRPMIEL EMBL:BC079368 IPI:IPI00470325 RefSeq:NP_001004261.1
UniGene:Rn.102445 ProteinModelPortal:Q68FT3 STRING:Q68FT3
PRIDE:Q68FT3 Ensembl:ENSRNOT00000021257 GeneID:309381
KEGG:rno:309381 UCSC:RGD:1303232 GeneTree:ENSGT00390000011684
InParanoid:Q68FT3 NextBio:660678 Genevestigator:Q68FT3
GermOnline:ENSRNOG00000015807 Uniprot:Q68FT3
Length = 581
Score = 113 (44.8 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 40/128 (31%), Positives = 55/128 (42%)
Query: 1060 IYLHSPSVTDLSLAPTGC---STFYALIPVPNLXXXXXXXXXXXXKLKNIVFMYLEQYCI 1116
I L PS D +LAPTGC S F P L + VF +E Y
Sbjct: 434 IELCIPSSLDPTLAPTGCHVVSLFTQYTPY-TLAGGKVWDEQKKNTYADKVFDCIEAYA- 491
Query: 1117 PNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRP--HNRDKN--LTNLYF 1172
P ++ ++ + I TP D + + G G+ F A L Q + RP + D + LY
Sbjct: 492 PGFKRSVLGRDILTPQDLERIFGLPGGNIFHGAMSLDQLYFARPVPQHSDYRCPVQGLYL 551
Query: 1173 VGAGTHPG 1180
G+G HPG
Sbjct: 552 CGSGAHPG 559
Score = 70 (29.7 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 864 LPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGG--NPFSTSSIYTLIH----AL 917
LP+ ++ + ++ Q+ +++ LK + +++ IG +P + S Y L+H +L
Sbjct: 216 LPQYYEVLT-APISKVLDQWFESEPLKATLATDAV-IGAMTSPHTPGSGYVLLHHVMGSL 273
Query: 918 EYEWGIW-FPKGGVGALIKALIKLFQNLGGNLILNSQVISI 957
E G W + +GG+GAL A+ G ++ V +
Sbjct: 274 EGMQGAWSYVQGGMGALSDAIASSATAHGASIFTEKTVAKV 314
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYKQ-DGFIFDAGPTVIT--DPNSIKLLFDLSKN---- 782
LQ G++T + E+R GG A + GF F +++ P I +L K+
Sbjct: 53 LQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQ-IYTDLELKKHGLKL 111
Query: 783 RMENYVNLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKV 841
+ N + P+ L L D + + +KQI++F+ D + + + + K++
Sbjct: 112 HLRNPYSFTPMLEEGTLSKPPRSLLLGTD-VAENQKQISQFSRKDAQAFPRYEEFMKRL 169
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 9 WDFILIGAGLWNSIIAWYLKQ 29
+D ++IGAG + A YL++
Sbjct: 35 YDAVVIGAGHNGLVAAAYLQR 55
>UNIPROTKB|Q3MHH6 [details] [associations]
symbol:PYROXD2 "Pyridine nucleotide-disulfide
oxidoreductase domain-containing protein 2" species:9913 "Bos
taurus" [GO:0016491 "oxidoreductase activity" evidence=IEA]
GO:GO:0016491 eggNOG:COG1233 EMBL:BC105235 IPI:IPI00716581
RefSeq:NP_001029704.1 UniGene:Bt.53596 ProteinModelPortal:Q3MHH6
STRING:Q3MHH6 PRIDE:Q3MHH6 GeneID:519120 KEGG:bta:519120 CTD:84795
HOGENOM:HOG000238954 InParanoid:Q3MHH6 OrthoDB:EOG4WM4TG
NextBio:20872812 Uniprot:Q3MHH6
Length = 581
Score = 107 (42.7 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 41/128 (32%), Positives = 54/128 (42%)
Query: 1060 IYLHSPSVTDLSLAPTGC---STFYALIPVPNLXXXXXXXXXXXXKLKNIVFMYLEQYCI 1116
I L PS D +LAP GC S F P L + VF +E Y
Sbjct: 434 IELCIPSSLDPTLAPPGCHVVSLFTQYTPY-TLAGGKAWDEQQRNTYADRVFDCIEAYA- 491
Query: 1117 PNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRP---HNRDKN-LTNLYF 1172
P + ++ + I TP D + V G G+ F A L Q + RP H+ + L LY
Sbjct: 492 PGFKGSVVGRDILTPPDLERVFGLPGGNIFHCAMSLDQLYFARPVPLHSSYCSPLRGLYL 551
Query: 1173 VGAGTHPG 1180
G+G HPG
Sbjct: 552 CGSGAHPG 559
Score = 73 (30.8 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 879 IVSQFIKNDYLKQAFSFNSLFIGG--NPFSTSSIYTLIH----ALEYEWGIW-FPKGGVG 931
++ Q+ +++ LK + +++ IG NP+ S Y L+H +LE G W + +GG+G
Sbjct: 230 VLDQWFESEPLKATLATDAV-IGAMTNPYIPGSGYVLLHHVMGSLEGVRGAWGYVQGGMG 288
Query: 932 ALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXXXXX-GQIFDADIIVSNADIINTY 990
AL A+ G ++ V + G + +++SNA T+
Sbjct: 289 ALSDAIASSATAHGVSIFTEKTVAKVQVSSGGRVQGVVLQDGSEVRSKVVLSNASPQITF 348
Query: 991 RNLLGQ 996
L Q
Sbjct: 349 LKLTPQ 354
Score = 53 (23.7 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYK-QDGFIFDAGPTVIT--DPNSIKLLFDLSKNRMEN 786
LQ G++T + E+R GG A + GF F +++ P L +L K+ +
Sbjct: 53 LQRFGVNTAVFERRHVIGGAAVTEEIVPGFKFSRASYLLSLLRPQIYSEL-ELKKHGLRL 111
Query: 787 YV-NLLPIKPFYRLYWGKE--KFLNYEDNIKDLEKQIAKFNLNDIKGY 831
++ N P G + + L ++ + +KQIA+F+ D + +
Sbjct: 112 HLRNPYSFTPMLEEGTGGKVPRSLLLGTDMVENQKQIAQFSKKDAQAF 159
Score = 39 (18.8 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 9 WDFILIGAGLWNSIIAWYLKQY 30
+D +++GAG + A YL+++
Sbjct: 35 YDAVVVGAGHNGLVAAAYLQRF 56
>UNIPROTKB|Q8N2H3 [details] [associations]
symbol:PYROXD2 "Pyridine nucleotide-disulfide
oxidoreductase domain-containing protein 2" species:9606 "Homo
sapiens" [GO:0016491 "oxidoreductase activity" evidence=IEA]
EMBL:CH471066 GO:GO:0016491 eggNOG:COG1233 EMBL:AL139243 CTD:84795
HOGENOM:HOG000238954 OrthoDB:EOG4WM4TG EMBL:AK075265 EMBL:BC006131
IPI:IPI00296156 RefSeq:NP_116098.2 UniGene:Hs.238303
ProteinModelPortal:Q8N2H3 SMR:Q8N2H3 IntAct:Q8N2H3 STRING:Q8N2H3
PhosphoSite:Q8N2H3 DMDM:109820933 PRIDE:Q8N2H3 DNASU:84795
Ensembl:ENST00000370575 GeneID:84795 KEGG:hsa:84795 UCSC:uc001kpc.3
GeneCards:GC10M100134 HGNC:HGNC:23517 HPA:HPA037566
neXtProt:NX_Q8N2H3 PharmGKB:PA165549043 InParanoid:Q8N2H3
OMA:HRPMIEL PhylomeDB:Q8N2H3 GenomeRNAi:84795 NextBio:74960
ArrayExpress:Q8N2H3 Bgee:Q8N2H3 CleanEx:HS_C10orf33
Genevestigator:Q8N2H3 GermOnline:ENSG00000119943 Uniprot:Q8N2H3
Length = 581
Score = 109 (43.4 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 40/128 (31%), Positives = 55/128 (42%)
Query: 1060 IYLHSPSVTDLSLAPTGC---STFYALIPVPNLXXXXXXXXXXXXKLKNIVFMYLEQYCI 1116
I L PS D +LAP GC S F +P L + VF +E Y
Sbjct: 434 IELCIPSSLDPTLAPPGCHVVSLFTQYMPY-TLAGGKAWDEQERDAYADRVFDCIEVYA- 491
Query: 1117 PNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRP---HNRDK-NLTNLYF 1172
P + ++ + I TP D + + G G+ F A L Q + RP H+ + L LY
Sbjct: 492 PGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQGLYL 551
Query: 1173 VGAGTHPG 1180
G+G HPG
Sbjct: 552 CGSGAHPG 559
Score = 72 (30.4 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 864 LPKLIKIKAWKSVYSIVSQFIKNDYLKQAFSFNSLFIGG--NPFSTSSIYTLIH----AL 917
LP+ ++ + ++ Q+ +++ LK + +++ IG +P + S Y L+H L
Sbjct: 216 LPRYYEVLT-APITKVLDQWFESEPLKATLATDAV-IGAMTSPHTPGSGYVLLHHVMGGL 273
Query: 918 EYEWGIW-FPKGGVGALIKALIKLFQNLGGNLILNSQVISI 957
E G W + +GG+GAL A+ G ++ V +
Sbjct: 274 EGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTVAKV 314
Score = 51 (23.0 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYKQ-DGFIFDAGPTVIT--DPNSIKLLFDLSKNRMEN 786
LQ G++T + E+R GG A + GF F +++ P I +L K+ +
Sbjct: 53 LQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQ-IYTDLELKKHGLRL 111
Query: 787 YV-NLLPIKPFYRLYWGKE--KFLNYEDNIKDLEKQIAKFNLND 827
++ N P G + + L ++ + +KQIA+F+ D
Sbjct: 112 HLRNPYSFTPMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKD 155
Score = 37 (18.1 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 9 WDFILIGAGLWNSIIAWYLKQ 29
+D ++IGAG + A YL++
Sbjct: 35 YDAVVIGAGHNGLVAAAYLQR 55
>UNIPROTKB|Q9UUQ6 [details] [associations]
symbol:CARRP "Bifunctional lycopene cyclase/phytoene
synthase" species:29924 "Mucor circinelloides f. lusitanicus"
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0045436 "lycopene
beta cyclase activity" evidence=IDA] [GO:0046905 "phytoene synthase
activity" evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872
GO:GO:0016117 GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767
GO:GO:0046905 EMBL:AJ250827 ProteinModelPortal:Q9UUQ6
Uniprot:Q9UUQ6
Length = 614
Score = 137 (53.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 1185 IIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHKL 1244
I++ SKSF +A +F +R ++ +LYA+CR DD+ DN+ +++ K+ + + H+
Sbjct: 295 ILRKASKSFYTASAVFPGDVRQELGVLYAFCRATDDLCDNEQVPVQTR--KEQLILTHQF 352
Query: 1245 --KILRIKTKR-ACIGFKMKE---PA--FLALQKIISI-HSFPVHLLFEHLDGFEMDVME 1295
+ KT I + PA A + + H + E LDG++ D +E
Sbjct: 353 VSDLFGQKTSAPTAIDWDFYNDQLPASCISAFKSFTRLRHVLEAGAIKELLDGYKWD-LE 411
Query: 1296 RTYITLDETLGYCYH--VAGTIG-----LIIAHLIG-VKEKDT---LNCARNLGIAFQLT 1344
R I E L Y Y VA ++G +I+AH + T + AR +G+ Q T
Sbjct: 412 RRSIRDQEDLRY-YSACVASSVGEMCTRIILAHADKPASRQQTQWIIQRAREMGLVLQYT 470
Query: 1345 NISRDVIDD 1353
NI+RD++ D
Sbjct: 471 NIARDIVTD 479
Score = 132 (51.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 1275 HSFPVHLLFEHLDGFEMDVMERTYITLDETLGYCYH--VAGTIG-----LIIAHLIG-VK 1326
H + E LDG++ D +ER I E L Y Y VA ++G +I+AH
Sbjct: 392 HVLEAGAIKELLDGYKWD-LERRSIRDQEDLRY-YSACVASSVGEMCTRIILAHADKPAS 449
Query: 1327 EKDT---LNCARNLGIAFQLTNISRDVIDDFY-VGRCYLPLDWLRNE--GLNKSNFVLAE 1380
+ T + AR +G+ Q TNI+RD++ D +GRCYLP DWL + L +
Sbjct: 450 RQQTQWIIQRAREMGLVLQYTNIARDIVTDSEELGRCYLPQDWLTEKEVALIQGGLAREI 509
Query: 1381 NRKKLFKVVTRILDVAEFYYSSSLVKLNTLPLRSTLAIVTSWSIYREI 1428
++L + R++ A+ + ++ LP + + ++Y I
Sbjct: 510 GEERLLSLSHRLIYQADELMVVANKGIDKLPSHCQGGVRAACNVYASI 557
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 9 W-DFILIGAGLWNSIIA 24
W D + IGAG W+ +A
Sbjct: 188 WVDVVAIGAGTWDISLA 204
Score = 40 (19.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 135 EYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDML 167
E H YTLP+ + YT LK L
Sbjct: 7 EVHLYYTLPVLGVLSWLSRPYYTATDALKFKFL 39
Score = 40 (19.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 535 EYHFIYTLPLTPNSLMIEDTRYTKKPFLKIDML 567
E H YTLP+ + YT LK L
Sbjct: 7 EVHLYYTLPVLGVLSWLSRPYYTATDALKFKFL 39
>WB|WBGene00018146 [details] [associations]
symbol:F37C4.6 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] eggNOG:COG1233
EMBL:FO081250 HOGENOM:HOG000238954 OMA:HRPMIEL
GeneTree:ENSGT00390000011684 PIR:T32568 RefSeq:NP_500428.1
ProteinModelPortal:O61196 SMR:O61196 STRING:O61196 PaxDb:O61196
EnsemblMetazoa:F37C4.6.1 EnsemblMetazoa:F37C4.6.2 GeneID:177147
KEGG:cel:CELE_F37C4.6 UCSC:F37C4.6.1 CTD:177147 WormBase:F37C4.6
InParanoid:O61196 NextBio:895552 Uniprot:O61196
Length = 544
Score = 89 (36.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 1107 VFMYLEQYCIPNLRKKLITQRIFTPNDFKDVLGSYLGSAFSFAPLLTQSAWFRPHNRDKN 1166
VF ++ Y PN +I I TP D ++ G G+ F + L Q RP ++ N
Sbjct: 449 VFSEIDAYA-PNFSSSVIGYDILTPPDIQNTFGITGGNIFHGSMSLDQLYVSRPISKWSN 507
Query: 1167 ----LTNLYFVGAGTHPG 1180
+ +LY G+G HPG
Sbjct: 508 YSTPIESLYLCGSGAHPG 525
Score = 85 (35.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/125 (20%), Positives = 55/125 (44%)
Query: 876 VYSIVSQFIKNDYLKQAFSFNSLF-IGGNPFSTSSIYTLIH----ALEYEWGIW-FPKGG 929
+ I++++ ++D LK + + + +P + Y L+H L+ G W + GG
Sbjct: 195 ISKIMNKWFESDVLKATLGTDGVIGLAASPMDPGTGYVLLHHVIGGLDEHKGAWGYVYGG 254
Query: 930 VGALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXXXXXGQIFDADIIVSNADIINT 989
+GA+ A+ + ++ G + V + G+ + I++SNA T
Sbjct: 255 MGAVSNAIAECAKSHGAEIYTEQDVQEVLLDGNVAKGVRLSNGKELHSKIVMSNATPHVT 314
Query: 990 YRNLL 994
+ +L+
Sbjct: 315 FNHLV 319
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 26/115 (22%), Positives = 49/115 (42%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYK-QDGFIFDAGPTVITDPNSIKLL-FDLSKNRMENY 787
L AG +LE+R GG A + GF F +++ + + +L K + +
Sbjct: 33 LTKAGKKVCVLERRHVVGGAAVTEEIVPGFRFSRASYLLSLLRPVVMQELNLKKFGLRYH 92
Query: 788 V-NLLPIKPFYRLYWGKEKFLNYEDNIKDLEKQIAKFNLNDIKGYRLFLNYSKKV 841
+ N P + E L D ++ +K+IAKF+ D Y + ++ ++
Sbjct: 93 IRNPNSFTPIRNTH---ESLLLGMDMAEN-QKEIAKFSQRDAGNYPKYEHFISEI 143
>TAIR|locus:2164590 [details] [associations]
symbol:LUT2 "LUTEIN DEFICIENT 2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;TAS]
[GO:0009765 "photosynthesis, light harvesting" evidence=TAS]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IMP;RCA]
[GO:0016705 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen" evidence=IEA]
[GO:0016123 "xanthophyll biosynthetic process" evidence=IGI]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0016120 "carotene biosynthetic process" evidence=IGI]
[GO:0045435 "lycopene epsilon cyclase activity" evidence=IGI;TAS]
UniPathway:UPA00804 UniPathway:UPA00801 InterPro:IPR008671
InterPro:IPR010108 Pfam:PF05834 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0031969 GO:GO:0016123 EMBL:AB024035
GO:GO:0016705 eggNOG:NOG12892 HOGENOM:HOG000224851
TIGRFAMs:TIGR01790 EMBL:U50738 EMBL:AF117257 EMBL:AY040024
EMBL:AY079371 IPI:IPI00529994 RefSeq:NP_200513.1 UniGene:At.7099
ProteinModelPortal:Q38932 SMR:Q38932 STRING:Q38932 PaxDb:Q38932
PRIDE:Q38932 EnsemblPlants:AT5G57030.1 GeneID:835806
KEGG:ath:AT5G57030 TAIR:At5g57030 InParanoid:Q38932 KO:K06444
OMA:NTYGIWA PhylomeDB:Q38932 ProtClustDB:PLN02697
BioCyc:ARA:AT5G57030-MONOMER BioCyc:MetaCyc:AT5G57030-MONOMER
Genevestigator:Q38932 GermOnline:AT5G57030 GO:GO:0045435
Uniprot:Q38932
Length = 524
Score = 127 (49.8 bits), Expect = 0.00031, P = 0.00031
Identities = 55/216 (25%), Positives = 94/216 (43%)
Query: 114 SSPHGLDIPIIMDAT--VNQK----NDEYH-FIYTLPLTPNSLMIEDTRYTKKPFLKIDM 166
+SP+ D + MD N+K EY F+Y +P+T + L E+T K + D+
Sbjct: 275 NSPYDPDQMVFMDYRDYTNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDL 334
Query: 167 LKKSIKDYAIKNRWKLKNIEREEIGSIPI--ALKNEKIIKFKKTICVGLRANLLHATTGY 224
LK + ++ EE IP+ +L N + +K + G A+++H TGY
Sbjct: 335 LKTKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTE----QKNLAFGAAASMVHPATGY 390
Query: 225 S----LPIAIQLAENIAKY--SITTNQINSTVLFKLVKKFIINHQKKQRFFCMLNRLFFL 278
S L A + A IA+ TT QINS + + +K+QR F + +
Sbjct: 391 SVVRSLSEAPKYASVIAEILREETTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIV 450
Query: 279 S-NSRCHLDIMQYFYTLPDKIIRNFYANKLSFFDKI 313
++ + F+ LP + + F + L+ D +
Sbjct: 451 QFDTEGIRSFFRTFFRLPKWMWQGFLGSTLTSGDLV 486
Score = 127 (49.8 bits), Expect = 0.00031, P = 0.00031
Identities = 55/216 (25%), Positives = 94/216 (43%)
Query: 514 SSPHGLDIPIIMDAT--VNQK----NDEYH-FIYTLPLTPNSLMIEDTRYTKKPFLKIDM 566
+SP+ D + MD N+K EY F+Y +P+T + L E+T K + D+
Sbjct: 275 NSPYDPDQMVFMDYRDYTNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDL 334
Query: 567 LKKSIKDYAIKNRWKLKNIEREEIGSIPI--ALKNEKIIKFKKTICVGLRANLLHATTGY 624
LK + ++ EE IP+ +L N + +K + G A+++H TGY
Sbjct: 335 LKTKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTE----QKNLAFGAAASMVHPATGY 390
Query: 625 S----LPIAIQLAENIAKY--SITTNQINSTVLFKLVKKFIINHQKKQRFFCMLNRLFFL 678
S L A + A IA+ TT QINS + + +K+QR F + +
Sbjct: 391 SVVRSLSEAPKYASVIAEILREETTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIV 450
Query: 679 S-NSRCHLDIMQYFYTLPDKIIRNFYANKLSFFDKI 713
++ + F+ LP + + F + L+ D +
Sbjct: 451 QFDTEGIRSFFRTFFRLPKWMWQGFLGSTLTSGDLV 486
>UNIPROTKB|F1SVB2 [details] [associations]
symbol:RETSAT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051786 "all-trans-retinol 13,14-reductase activity"
evidence=IEA] [GO:0042572 "retinol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005640 "nuclear outer membrane" evidence=IEA] GO:GO:0005789
GO:GO:0042572 GO:GO:0005640 CTD:54884 GeneTree:ENSGT00390000017613
KO:K09516 GO:GO:0051786 OMA:PSHTTFS EMBL:CU951451 EMBL:GACC01000106
RefSeq:XP_003124992.1 UniGene:Ssc.1051 Ensembl:ENSSSCT00000009020
GeneID:100519138 KEGG:ssc:100519138 Uniprot:F1SVB2
Length = 611
Score = 125 (49.1 bits), Expect = 0.00064, P = 0.00064
Identities = 63/290 (21%), Positives = 124/290 (42%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVI--TDPNSI-KLLFD-LSKNRME 785
L AG ++LEQ K GG + + +DG FD G I + S + + D +++ +++
Sbjct: 85 LAKAGKRVLVLEQHTKAGGCCHTFGKDGLEFDTGIHYIGRMEEGSFGRFILDQITEGQLD 144
Query: 786 -----NYVNLLPI-----KPFYRLYWGKEKFLN-YEDNIKDLEKQIAKFNLNDIKGYRLF 834
+ +++ + + + +Y GK+ ++ ++ E I K+ IK ++
Sbjct: 145 WATLSSPFDIMVLDGPNGRKEFPMYTGKKAYVQGLKEKFPQEEAAIDKY----IKLVKMV 200
Query: 835 LNYSKKVFKEGYLSFASKSFLTINDMLFILPKLIKIKAWKSVYSIVSQFIKNDYLKQAFS 894
+ + L FL+ +L ++ +S+ ++ Q + L+ S
Sbjct: 201 SSRASHAILLKILPLPLAQFLSKYGLLTRFSPFLRAST-QSLAKVLQQLPASPELRAVLS 259
Query: 895 FNSLFIGGNP-FSTSSIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQ 953
+ G P ST +++ L+ Y G ++PKGG + I + Q GG ++ +
Sbjct: 260 YIFPTYGVTPSHSTFAMHALL-VDHYLKGAFYPKGGTSEIAFHTIPVIQRAGGAVLTRAP 318
Query: 954 VISIYXXXXXXX-XXXXXXGQ----IFDADIIVSNADIINTYRNLLGQYA 998
V SI GQ IF +++S+A + NTY +LL + A
Sbjct: 319 VQSILLDSAGKACGVAVKNGQELVNIF-CPVVISDAGLFNTYEHLLPEKA 367
>MGI|MGI:1914692 [details] [associations]
symbol:Retsat "retinol saturase (all trans retinol 13,14
reductase)" species:10090 "Mus musculus" [GO:0005640 "nuclear outer
membrane" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] [GO:0042572 "retinol metabolic process"
evidence=IDA] [GO:0051786 "all-trans-retinol 13,14-reductase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] MGI:MGI:1914692 GO:GO:0005789 GO:GO:0042572
EMBL:CH466523 GO:GO:0005640 eggNOG:COG1233 CTD:54884
GeneTree:ENSGT00390000017613 HOGENOM:HOG000233930
HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN GO:GO:0051786
EMBL:AF466400 EMBL:AY704159 EMBL:EF620363 EMBL:EF620364
EMBL:EF620365 EMBL:EF620366 EMBL:AK002851 EMBL:AK144115
EMBL:AC125039 EMBL:BC011203 EMBL:BC117751 IPI:IPI00471380
RefSeq:NP_080435.3 UniGene:Mm.305108 ProteinModelPortal:Q64FW2
SMR:Q64FW2 STRING:Q64FW2 PhosphoSite:Q64FW2 PaxDb:Q64FW2
PRIDE:Q64FW2 Ensembl:ENSMUST00000070597 GeneID:67442 KEGG:mmu:67442
InParanoid:Q149J8 OMA:PSHTTFS BioCyc:MetaCyc:MONOMER-16797
BRENDA:1.3.99.23 NextBio:324578 Bgee:Q64FW2 Genevestigator:Q64FW2
GermOnline:ENSMUSG00000056666 Uniprot:Q64FW2
Length = 609
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00081
Identities = 65/284 (22%), Positives = 118/284 (41%)
Query: 730 LQTAGISTIILEQRDKPGGRAYVYKQDGFIFDAGPTVI---TDPNSIKLLFDLSKNRMEN 786
L AG ++LEQ K GG + + ++G FD G I + N + + D E
Sbjct: 85 LAKAGKRVLVLEQHTKAGGCCHTFGENGLEFDTGIHYIGRMREGNIGRFILD---QITEG 141
Query: 787 YVNLLPI-KPFYRLYW----GKEKFLNY---EDNIKDLEKQIAKFNLNDIKGYRLFLNYS 838
++ P+ PF + G+++F Y ++ I+ L+K+ K K L +
Sbjct: 142 QLDWAPMASPFDLMILEGPNGRKEFPMYSGRKEYIQGLKKKFPKEEAVIDKYMELVKVVA 201
Query: 839 KKVFKEGYLSFASKSFLTINDMLFILPKLIKI--KAWKSVYSIVSQFIKNDYLKQAFSFN 896
+ V L F + +L + + +S+ ++ Q + L+ S+
Sbjct: 202 RGVSHAVLLKFLPLPLTQLLSKFGLLTRFSPFCRASTQSLAEVLQQLGASRELQAVLSYI 261
Query: 897 SLFIGGNPFSTS-SIYTLIHALEYEWGIWFPKGGVGALIKALIKLFQNLGGNLILNSQVI 955
G P T+ S++ L+ Y G ++P+GG + I L Q GG ++ + V
Sbjct: 262 FPTYGVTPSHTAFSLHALL-VDHYIQGAYYPRGGSSEIAFHTIPLIQRAGGAVLTRATVQ 320
Query: 956 SIYXXXXXXX-XXXXXXGQ----IFDADIIVSNADIINTYRNLL 994
S+ GQ I+ +++SNA + NTY++LL
Sbjct: 321 SVLLDSAGRACGVSVKKGQELVNIY-CPVVISNAGMFNTYQHLL 363
>TAIR|locus:2009395 [details] [associations]
symbol:AT1G57770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016117 "carotenoid
biosynthetic process" evidence=IBA] [GO:0016491 "oxidoreductase
activity" evidence=IEA;ISS] [GO:0046608 "carotenoid isomerase
activity" evidence=IBA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR014101 EMBL:CP002684 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:AC079732
OMA:PQCESFM ProtClustDB:CLSN2690470 EMBL:AY065278 EMBL:AY133831
IPI:IPI00524521 PIR:A96612 RefSeq:NP_176088.2 UniGene:At.28533
ProteinModelPortal:Q9FVR9 SMR:Q9FVR9 STRING:Q9FVR9 PaxDb:Q9FVR9
PRIDE:Q9FVR9 EnsemblPlants:AT1G57770.1 GeneID:842152
KEGG:ath:AT1G57770 TAIR:At1g57770 InParanoid:Q9FVR9
PhylomeDB:Q9FVR9 ArrayExpress:Q9FVR9 Genevestigator:Q9FVR9
Uniprot:Q9FVR9
Length = 574
Score = 92 (37.4 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 40/164 (24%), Positives = 62/164 (37%)
Query: 925 FPKGGVGALIKALIKLFQNLGGNLILNSQVISIYXXXXXXXXXXXXXGQIFDA-DIIVSN 983
+P G GA+++AL++ + GG L L S V +I GQ A +VSN
Sbjct: 290 YPIDGTGAVVEALVRGLEKFGGRLSLKSHVENIVIENGKAVGVKLRNGQFVRARKAVVSN 349
Query: 984 ADIINTYRNLLGQYAFGXXXXXXXXXXXMSNSLFVIYFGLSEQ--YTHLAHHTIFFPSNY 1041
A + +T + LL A S ++ G + L H I
Sbjct: 350 ASMWDTLK-LLPPGALPESYVKGVNTTPQCESFMHLHLGFDAEGIADDLEIHHI------ 402
Query: 1042 KKSIENIFGKNFSRDNLSIYLHSPSVTDLSLAPTGCSTFYALIP 1085
+ N + + D + + PSV +LAP G +A P
Sbjct: 403 ---VVNDWDRGVDADQNVVLISVPSVLSPNLAPPGKHVLHAYCP 443
Score = 82 (33.9 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 738 IILEQRDKPGGRAYVYKQDGFIFDAGPTVITDPNSIKLLFDLSKNRMENYVNLLPIKPF- 796
I+LE D PGG A+ ++ G+ FD+GP++ + S + ++ P K +
Sbjct: 79 IVLESHDHPGGAAHSFEIKGYKFDSGPSLFSGLQSRGPQANPLAQVLDALGESFPCKKYD 138
Query: 797 -YRLYWGKEKFLNY---EDNIKDLEK 818
+ +Y + FL+ D KDLEK
Sbjct: 139 SWMVYLPEGDFLSRIGPTDFFKDLEK 164
>RGD|61834 [details] [associations]
symbol:Fdft1 "farnesyl diphosphate farnesyl transferase 1"
species:10116 "Rattus norvegicus" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IMP;TAS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IMP] [GO:0051996 "squalene synthase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 RGD:61834 GO:GO:0043231
GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695 GO:GO:0045338
GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310 GO:GO:0051996
TIGRFAMs:TIGR01559 HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC
CTD:2222 GeneTree:ENSGT00390000016034 EMBL:M95591 EMBL:BC081810
IPI:IPI00210233 PIR:A45105 RefSeq:NP_062111.1 UniGene:Rn.154404
ProteinModelPortal:Q02769 SMR:Q02769 STRING:Q02769 PRIDE:Q02769
Ensembl:ENSRNOT00000032089 GeneID:29580 KEGG:rno:29580
UCSC:RGD:61834 InParanoid:Q02769 BindingDB:Q02769 ChEMBL:CHEMBL3815
NextBio:609686 Genevestigator:Q02769 GermOnline:ENSRNOG00000021314
Uniprot:Q02769
Length = 416
Score = 121 (47.7 bits), Expect = 0.00097, P = 0.00097
Identities = 49/222 (22%), Positives = 95/222 (42%)
Query: 1184 KIIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKF-LKKNVSM-- 1240
K + S+SF++ I+ D IR+ V + Y R D V D+ K L +N
Sbjct: 45 KYLDQTSRSFAAVIQALDGDIRHAVCVFYLILRAMDTVEDDMAISVEKKIPLLRNFHTFL 104
Query: 1241 -KHKLKILRIKTKRACIGFKMKEPAFLALQKIISIHSFPVHLLFEHLDGFEMDVMERTYI 1299
+ + + K K + + L + + + + + + + + +
Sbjct: 105 YEPEWRFTESKEKHRVV-LEDFPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVT 163
Query: 1300 TLDETLGYCYHVAGTIGLIIAHLIGVKE-KDTL-----NCARNLGIAFQLTNISRDVIDD 1353
+ + YC++VAG +G+ ++ L E +D + CA ++G+ Q TNI RD ++D
Sbjct: 164 SKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDTECANSMGLFLQKTNIIRDYLED 223
Query: 1354 FYVGRCYLPLD-WLRNEGLNK-SNFVLAENRKKLFKVVTRIL 1393
GR + P + W + + K +FV EN K + ++
Sbjct: 224 QQEGRQFWPQEVW--GKYVKKLEDFVKPENVDVAVKCLNELI 263
>UNIPROTKB|E2R6N6 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
OMA:ELRHAVC CTD:2222 GeneTree:ENSGT00390000016034 EMBL:AAEX03014318
RefSeq:XP_534557.2 Ensembl:ENSCAFT00000012705 GeneID:477362
KEGG:cfa:477362 NextBio:20852865 Uniprot:E2R6N6
Length = 417
Score = 121 (47.7 bits), Expect = 0.00097, P = 0.00097
Identities = 49/197 (24%), Positives = 88/197 (44%)
Query: 1184 KIIKAGSKSFSSAIKLFDPVIRYKVLMLYAWCRYCDDVIDNQICGNRSKFLKKNVSMKHK 1243
K + S+SF++ I+ D +R+ V + Y R D + D+ ++K V + H
Sbjct: 45 KYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTIS-----VEKKVPLLHN 99
Query: 1244 LKILRIKTKRACIGFKMKEPAFLALQKIISIHSFPVHLLFEHL--D-----GFEMDVMER 1296
+ + K K+ L IS+ + ++ + D GF M
Sbjct: 100 FHSYLYEPDWRYMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLD 159
Query: 1297 TYITLDETLG-YCYHVAGTIGLIIAHLIGVKE-KDTL-----NCARNLGIAFQLTNISRD 1349
++T ++ YC++VAG +G+ ++ L E +D L CA ++G+ Q TNI RD
Sbjct: 160 KHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGEDIECANSMGLFLQKTNIIRD 219
Query: 1350 VIDDFYVGRCYLPLD-W 1365
++D GR + P + W
Sbjct: 220 YLEDQREGREFWPQEVW 236
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1428 1325 0.00085 124 3 11 22 0.47 33
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 634 (67 KB)
Total size of DFA: 591 KB (2260 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 112.18u 0.13s 112.31t Elapsed: 00:01:07
Total cpu time: 112.19u 0.13s 112.32t Elapsed: 00:01:10
Start: Thu Aug 15 12:53:19 2013 End: Thu Aug 15 12:54:29 2013