Query psy10547
Match_columns 269
No_of_seqs 191 out of 2359
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 21:13:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4194|consensus 99.9 1.4E-24 3E-29 188.2 9.6 225 36-267 45-335 (873)
2 KOG4237|consensus 99.9 1E-25 2.2E-30 187.1 0.8 133 36-178 36-181 (498)
3 KOG4194|consensus 99.9 1.3E-23 2.9E-28 182.2 2.1 195 71-266 168-433 (873)
4 PLN00113 leucine-rich repeat r 99.8 6E-20 1.3E-24 178.2 13.6 193 68-263 85-298 (968)
5 KOG0444|consensus 99.8 1.2E-20 2.5E-25 165.6 0.3 185 68-268 95-287 (1255)
6 PLN00113 leucine-rich repeat r 99.8 2.1E-18 4.5E-23 167.5 12.5 189 74-263 138-346 (968)
7 KOG0617|consensus 99.7 2.6E-20 5.6E-25 139.2 -4.1 157 95-268 29-192 (264)
8 KOG0444|consensus 99.7 4.1E-19 8.8E-24 156.0 -0.5 177 74-266 76-262 (1255)
9 KOG0472|consensus 99.7 1.1E-19 2.3E-24 151.9 -4.6 187 77-269 92-295 (565)
10 PRK15370 E3 ubiquitin-protein 99.7 1.9E-16 4.1E-21 147.1 11.1 172 78-266 201-384 (754)
11 KOG4237|consensus 99.7 9.9E-18 2.1E-22 139.8 0.7 149 79-243 49-199 (498)
12 KOG0617|consensus 99.7 6.7E-19 1.5E-23 131.6 -6.3 170 74-260 31-201 (264)
13 PRK15387 E3 ubiquitin-protein 99.6 3.2E-15 6.9E-20 138.6 14.2 199 39-265 194-418 (788)
14 KOG0472|consensus 99.6 1.3E-18 2.8E-23 145.5 -8.5 188 72-264 110-312 (565)
15 KOG0618|consensus 99.6 3.2E-17 7E-22 149.3 -1.5 191 67-260 278-487 (1081)
16 PRK15387 E3 ubiquitin-protein 99.6 3.5E-15 7.7E-20 138.3 10.3 94 162-266 343-439 (788)
17 PRK15370 E3 ubiquitin-protein 99.6 1.9E-15 4E-20 140.6 8.4 174 77-267 221-406 (754)
18 KOG0618|consensus 99.5 6E-16 1.3E-20 141.1 -2.8 173 78-264 266-467 (1081)
19 PLN03210 Resistant to P. syrin 99.4 5E-12 1.1E-16 124.5 14.3 81 185-267 778-864 (1153)
20 KOG0532|consensus 99.4 7.3E-15 1.6E-19 128.0 -5.8 173 76-268 75-253 (722)
21 cd00116 LRR_RI Leucine-rich re 99.4 3.6E-13 7.8E-18 114.8 3.7 187 65-262 40-263 (319)
22 cd00116 LRR_RI Leucine-rich re 99.3 1.4E-12 3.1E-17 111.1 5.8 189 62-264 67-293 (319)
23 PLN03210 Resistant to P. syrin 99.3 3.3E-11 7.2E-16 118.8 15.5 100 162-266 779-887 (1153)
24 PF14580 LRR_9: Leucine-rich r 99.3 2.4E-12 5.1E-17 99.3 5.4 120 101-238 21-146 (175)
25 KOG1259|consensus 99.3 4.8E-13 1E-17 108.7 1.6 196 64-267 202-417 (490)
26 PF14580 LRR_9: Leucine-rich r 99.3 1.7E-12 3.7E-17 100.0 4.0 116 137-257 20-148 (175)
27 KOG0532|consensus 99.3 1.5E-13 3.2E-18 120.0 -3.2 171 79-269 53-231 (722)
28 COG4886 Leucine-rich repeat (L 99.3 4.8E-12 1E-16 111.3 6.2 174 76-267 116-295 (394)
29 KOG1259|consensus 99.2 4.8E-12 1E-16 103.0 0.0 128 101-248 286-415 (490)
30 PF13855 LRR_8: Leucine rich r 99.2 2.1E-11 4.5E-16 77.7 2.8 60 162-221 2-61 (61)
31 PF13855 LRR_8: Leucine rich r 99.0 1.7E-10 3.6E-15 73.5 3.1 60 137-197 2-61 (61)
32 COG4886 Leucine-rich repeat (L 99.0 7.2E-10 1.6E-14 97.5 5.2 168 81-266 98-272 (394)
33 KOG1909|consensus 99.0 1.2E-10 2.6E-15 96.5 0.0 202 58-262 74-311 (382)
34 PLN03150 hypothetical protein; 98.9 2.9E-09 6.3E-14 98.6 8.9 83 163-245 420-503 (623)
35 PLN03150 hypothetical protein; 98.9 3.7E-09 8.1E-14 97.9 8.6 84 138-222 420-503 (623)
36 KOG3207|consensus 98.9 4.3E-10 9.4E-15 95.7 0.7 188 74-262 119-339 (505)
37 KOG0531|consensus 98.8 7.9E-10 1.7E-14 97.8 -1.6 128 76-223 72-200 (414)
38 KOG0531|consensus 98.7 1.7E-09 3.6E-14 95.7 -0.0 132 70-222 89-221 (414)
39 KOG1859|consensus 98.7 1.3E-09 2.8E-14 98.3 -2.4 121 137-263 165-293 (1096)
40 KOG3207|consensus 98.7 8.8E-09 1.9E-13 87.9 2.4 156 77-246 173-340 (505)
41 KOG1909|consensus 98.7 8.8E-09 1.9E-13 85.6 2.3 191 64-263 46-284 (382)
42 KOG1644|consensus 98.5 2.4E-07 5.2E-12 71.7 5.3 122 102-240 22-148 (233)
43 KOG4579|consensus 98.4 2E-08 4.4E-13 73.0 -1.8 85 163-248 55-139 (177)
44 KOG1859|consensus 98.4 5.1E-09 1.1E-13 94.5 -6.3 104 137-246 188-293 (1096)
45 KOG4579|consensus 98.4 4.6E-08 9.9E-13 71.1 -0.9 104 162-265 28-139 (177)
46 PF13306 LRR_5: Leucine rich r 98.3 1.5E-06 3.3E-11 63.8 6.6 109 91-218 3-112 (129)
47 PF12799 LRR_4: Leucine Rich r 98.3 6.8E-07 1.5E-11 52.5 3.7 37 186-223 2-38 (44)
48 KOG1644|consensus 98.3 8.8E-07 1.9E-11 68.6 5.0 124 78-218 21-149 (233)
49 PF13306 LRR_5: Leucine rich r 98.3 4.5E-06 9.8E-11 61.2 7.5 120 73-212 9-129 (129)
50 PF12799 LRR_4: Leucine Rich r 98.2 1.1E-06 2.4E-11 51.6 3.0 38 162-200 2-39 (44)
51 KOG4658|consensus 98.2 1.9E-06 4.2E-11 82.3 5.8 126 79-220 526-653 (889)
52 COG5238 RNA1 Ran GTPase-activa 98.1 4.8E-07 1E-11 73.2 0.0 199 60-264 76-318 (388)
53 PRK15386 type III secretion pr 98.1 1.6E-05 3.4E-10 69.1 8.3 124 100-259 53-187 (426)
54 KOG3665|consensus 98.0 4.2E-06 9E-11 78.1 4.2 124 137-263 123-264 (699)
55 KOG4658|consensus 98.0 6.3E-06 1.4E-10 78.9 4.4 105 77-196 546-653 (889)
56 PRK15386 type III secretion pr 98.0 7.9E-05 1.7E-09 64.9 10.5 32 76-110 52-83 (426)
57 KOG2123|consensus 97.7 2.1E-06 4.6E-11 69.8 -3.2 81 137-222 20-101 (388)
58 COG5238 RNA1 Ran GTPase-activa 97.6 3.7E-05 7.9E-10 62.6 2.8 152 100-262 93-285 (388)
59 KOG2982|consensus 97.4 2.9E-05 6.3E-10 63.9 -1.1 170 79-263 48-263 (418)
60 KOG2120|consensus 97.3 4.7E-05 1E-09 62.7 -0.3 202 49-258 137-372 (419)
61 KOG2982|consensus 97.3 7.6E-05 1.7E-09 61.5 0.6 151 101-264 47-214 (418)
62 KOG3665|consensus 97.2 0.00025 5.4E-09 66.5 3.1 130 101-246 124-264 (699)
63 KOG2123|consensus 97.1 2.4E-05 5.3E-10 63.8 -3.5 79 101-197 21-100 (388)
64 PF00560 LRR_1: Leucine Rich R 96.8 0.0004 8.6E-09 34.1 0.5 19 250-268 1-19 (22)
65 KOG2120|consensus 96.6 8.7E-05 1.9E-09 61.2 -4.5 123 137-260 186-324 (419)
66 PF13504 LRR_7: Leucine rich r 96.4 0.0017 3.7E-08 29.6 1.2 16 250-265 2-17 (17)
67 PF00560 LRR_1: Leucine Rich R 96.4 0.0016 3.5E-08 31.8 1.1 19 211-229 2-20 (22)
68 KOG2739|consensus 96.3 0.0036 7.8E-08 50.8 3.0 83 137-223 44-130 (260)
69 KOG2739|consensus 96.1 0.0045 9.7E-08 50.2 2.6 94 162-258 44-152 (260)
70 smart00369 LRR_TYP Leucine-ric 95.2 0.016 3.4E-07 29.5 1.9 21 185-205 2-22 (26)
71 smart00370 LRR Leucine-rich re 95.2 0.016 3.4E-07 29.5 1.9 21 185-205 2-22 (26)
72 PF13504 LRR_7: Leucine rich r 95.2 0.013 2.9E-07 26.6 1.4 13 211-223 3-15 (17)
73 PF01462 LRRNT: Leucine rich r 95.2 0.014 3.1E-07 30.3 1.6 26 37-68 2-27 (28)
74 smart00369 LRR_TYP Leucine-ric 94.4 0.024 5.2E-07 28.7 1.3 18 250-267 3-20 (26)
75 smart00370 LRR Leucine-rich re 94.4 0.024 5.2E-07 28.7 1.3 18 250-267 3-20 (26)
76 KOG3864|consensus 94.0 0.018 3.9E-07 45.1 0.4 34 90-123 92-125 (221)
77 smart00013 LRRNT Leucine rich 93.7 0.054 1.2E-06 29.3 1.9 28 37-70 2-29 (33)
78 smart00364 LRR_BAC Leucine-ric 92.8 0.076 1.7E-06 26.9 1.4 17 250-266 3-19 (26)
79 KOG0473|consensus 92.7 0.002 4.4E-08 51.5 -6.6 90 154-246 36-125 (326)
80 KOG0473|consensus 92.4 0.002 4.3E-08 51.6 -7.1 82 137-222 43-124 (326)
81 KOG4308|consensus 91.1 0.0052 1.1E-07 55.3 -6.8 15 208-222 203-217 (478)
82 KOG3864|consensus 89.2 0.061 1.3E-06 42.2 -1.4 81 137-218 102-185 (221)
83 KOG4308|consensus 88.1 0.004 8.7E-08 56.0 -9.9 85 162-246 205-304 (478)
84 smart00365 LRR_SD22 Leucine-ri 87.3 0.51 1.1E-05 24.0 1.7 16 185-200 2-17 (26)
85 smart00368 LRR_RI Leucine rich 79.6 1.5 3.3E-05 22.5 1.6 13 250-262 3-15 (28)
86 PF13516 LRR_6: Leucine Rich r 77.6 1.6 3.4E-05 21.3 1.3 14 209-222 2-15 (24)
87 KOG1947|consensus 73.0 2.1 4.5E-05 38.4 1.7 34 209-242 269-305 (482)
88 KOG3763|consensus 69.9 2.7 5.9E-05 38.2 1.7 36 184-219 217-254 (585)
89 TIGR00864 PCC polycystin catio 57.4 6.8 0.00015 42.6 2.0 32 167-198 1-32 (2740)
90 KOG3763|consensus 53.4 8.5 0.00018 35.2 1.8 60 162-222 219-283 (585)
91 TIGR00864 PCC polycystin catio 50.7 12 0.00026 40.9 2.5 33 142-175 1-33 (2740)
92 KOG1947|consensus 50.7 16 0.00034 32.7 3.1 59 137-196 244-306 (482)
93 PF07473 Toxin_11: Spasmodic p 25.4 40 0.00087 17.1 0.8 11 35-45 10-20 (28)
94 PF00299 Squash: Squash family 24.3 49 0.0011 17.1 1.0 11 35-45 14-24 (29)
95 smart00286 PTI Plant trypsin i 24.2 45 0.00097 17.2 0.9 11 35-45 14-24 (29)
96 smart00367 LRR_CC Leucine-rich 23.6 63 0.0014 15.8 1.4 10 210-219 3-12 (26)
97 PF07127 Nodulin_late: Late no 23.5 1.7E+02 0.0037 17.5 3.6 6 35-40 34-39 (54)
98 PF11466 Doppel: Prion-like pr 23.3 1.3E+02 0.0027 15.7 2.5 21 1-21 1-21 (30)
99 PF08576 DUF1764: Eukaryotic p 23.0 44 0.00094 23.3 1.0 9 22-30 89-97 (102)
100 cd00150 PlantTI Plant trypsin 21.6 55 0.0012 16.6 0.9 11 35-45 12-22 (27)
No 1
>KOG4194|consensus
Probab=99.91 E-value=1.4e-24 Score=188.22 Aligned_cols=225 Identities=25% Similarity=0.431 Sum_probs=155.2
Q ss_pred ccCCcceeecCCCCceEEEecCCCCCchh-----hhhhhhcc------------------CCCCcccEEEecCCCccccC
Q psy10547 36 ELQSTCICSYNTANELSIQCNDLTNYPLF-----KATLNKHV------------------NTKVPLDLLYINNSAIRNIN 92 (269)
Q Consensus 36 ~~~~~C~C~~~~~~~~~v~C~~~~~~~~~-----~~~l~~~~------------------~~~~~l~~l~l~~~~i~~l~ 92 (269)
.||+.|.|.. .-+.|.+ .+++.+ .+.+|... ....+|+.+++.+|.+..||
T Consensus 45 ~cpa~c~c~~-----~lldcs~-~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP 118 (873)
T KOG4194|consen 45 ECPATCPCNT-----RLLDCSD-RELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIP 118 (873)
T ss_pred cCCCcCCCCc-----eeeecCc-cccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcc
Confidence 6778999975 5677773 333332 33333332 34455666666666666666
Q ss_pred cCCCCCCcccEEEecCCCCcccCcccccCCccccccc----------cccccc-ccccEEEcCCCCCCccChhHHhhccc
Q psy10547 93 ENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN----------ENTFNG-IFIKNLQLSHCRINSITPNAFRHLEF 161 (269)
Q Consensus 93 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~----------~~~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~ 161 (269)
...-..-.++.|++.+|.|+.+....++.++.|+.++ .+.|.. .++++|+|++|.|+.+..+.|..+.
T Consensus 119 ~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~ln- 197 (873)
T KOG4194|consen 119 RFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLN- 197 (873)
T ss_pred cccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccc-
Confidence 5443333477777777777777777777777777554 222322 3677778888877777777777777
Q ss_pred cccEEEccCCCCCccChhhhcCCCCCCEEeccCCCC------------------------CCCCCCcccCCCCCCEEEcC
Q psy10547 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI------------------------GKIPDDSFSTLNNLVTLKLS 217 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i------------------------~~i~~~~~~~l~~L~~L~L~ 217 (269)
+|..|.|++|+++.++...|+.+++|+.|+|..|+| ..+.+++|..+.++++|+|+
T Consensus 198 sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~ 277 (873)
T KOG4194|consen 198 SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLE 277 (873)
T ss_pred hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecc
Confidence 777777777777777766666666666555555554 44556677777888888888
Q ss_pred CCcccccc-ccccCcCCCceeeeccCcccccc-------cccceeecCCCCCCCCCCC
Q psy10547 218 DNNLTLYK-NSFRGLELNNNLTLYKNSFRGLE-------LSLKNLNLKNTKLKSVTPY 267 (269)
Q Consensus 218 ~n~l~~~p-~~~~~l~~L~~l~l~~n~~~~l~-------~~L~~L~l~~n~l~~~p~~ 267 (269)
.|++..+. .++.+++.|+.|++++|++.++. .+|++|||+.|+|++++++
T Consensus 278 ~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~ 335 (873)
T KOG4194|consen 278 TNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEG 335 (873)
T ss_pred cchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChh
Confidence 88888764 47888889999999999888753 5899999999999998875
No 2
>KOG4237|consensus
Probab=99.91 E-value=1e-25 Score=187.06 Aligned_cols=133 Identities=24% Similarity=0.430 Sum_probs=104.3
Q ss_pred ccCCcceeecCCCCceEEEecCCCCCchhhhhhhhccCCCCcccEEEecCCCccccCcCCCCCCc-ccEEEecCCCCccc
Q psy10547 36 ELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSI 114 (269)
Q Consensus 36 ~~~~~C~C~~~~~~~~~v~C~~~~~~~~~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~-L~~L~l~~n~l~~~ 114 (269)
.||.+|.|.... +..|.|+ ..++.++|..+|... ..+++..|.|..||+++|..+. |+.|||++|.|+.|
T Consensus 36 ~CP~pC~Cs~~~--g~~VdCr-~~GL~eVP~~LP~~t------veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I 106 (498)
T KOG4237|consen 36 ACPAPCTCSDVE--GGIVDCR-GKGLTEVPANLPPET------VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFI 106 (498)
T ss_pred cCCCCcccCCCC--CceEEcc-CCCcccCcccCCCcc------eEEEeccCCcccCChhhccchhhhceecccccchhhc
Confidence 455889997533 6789999 788999999999876 8899999999999999999987 99999999999999
Q ss_pred CcccccCCccccc-----------ccccccccc-cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccCh
Q psy10547 115 TPNAFRHLDAIRN-----------INENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178 (269)
Q Consensus 115 ~~~~~~~l~~L~~-----------l~~~~~~~~-~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 178 (269)
.|++|++++++.. |..+.|.++ +++.|.+.-|.+..+..++|..++ ++..|.+-+|.+..+..
T Consensus 107 ~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~-~l~lLslyDn~~q~i~~ 181 (498)
T KOG4237|consen 107 APDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLP-SLSLLSLYDNKIQSICK 181 (498)
T ss_pred ChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhh-hcchhcccchhhhhhcc
Confidence 9999999986542 234444444 566666666677666667777776 67777776666654443
No 3
>KOG4194|consensus
Probab=99.87 E-value=1.3e-23 Score=182.21 Aligned_cols=195 Identities=26% Similarity=0.459 Sum_probs=130.8
Q ss_pred ccCCCCcccEEEecCCCccccCcCCCCCCc-ccEEEecCCCCcccCcccccCCccccccc----------ccccccc---
Q psy10547 71 HVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN----------ENTFNGI--- 136 (269)
Q Consensus 71 ~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~l~----------~~~~~~~--- 136 (269)
.+++..+++.|++++|.|+.+..+.|...+ |..|.++.|+++.+++..|+++++|+.|+ .-.|+|.
T Consensus 168 sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl 247 (873)
T KOG4194|consen 168 SFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSL 247 (873)
T ss_pred CCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhh
Confidence 345556778888888888888888888777 88888888888888887888777777543 1112221
Q ss_pred ----------------------------------------------cccEEEcCCCCCCccChhHHhhccccccEEEccC
Q psy10547 137 ----------------------------------------------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQE 170 (269)
Q Consensus 137 ----------------------------------------------~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~ 170 (269)
.|+.|++++|+|+.+.++++.... +|++|+|++
T Consensus 248 ~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq-kL~~LdLs~ 326 (873)
T KOG4194|consen 248 QNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ-KLKELDLSS 326 (873)
T ss_pred hhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc-cceeEeccc
Confidence 355556666666666666655555 666666666
Q ss_pred CCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcccc----ccccccCcCCCceeeeccCcccc
Q psy10547 171 NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL----YKNSFRGLELNNNLTLYKNSFRG 246 (269)
Q Consensus 171 n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~----~p~~~~~l~~L~~l~l~~n~~~~ 246 (269)
|.++.++++.|..+..|+.|+|++|.++.+.+++|..+.+|+.|+|++|.++. -...+..+++|+.|.+.+|++..
T Consensus 327 N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~ 406 (873)
T KOG4194|consen 327 NRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKS 406 (873)
T ss_pred cccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeee
Confidence 66666666666666666666666666666666666667777777777776652 22356667777777777776555
Q ss_pred cc-------cccceeecCCCCCCCCCC
Q psy10547 247 LE-------LSLKNLNLKNTKLKSVTP 266 (269)
Q Consensus 247 l~-------~~L~~L~l~~n~l~~~p~ 266 (269)
++ .+|++|||.+|.|-.+-+
T Consensus 407 I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 407 IPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred cchhhhccCcccceecCCCCcceeecc
Confidence 44 367777777777766544
No 4
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.83 E-value=6e-20 Score=178.17 Aligned_cols=193 Identities=23% Similarity=0.330 Sum_probs=111.6
Q ss_pred hhhccCCCCcccEEEecCCCcc-ccCcCCCCCCc-ccEEEecCCCCcccCcccccCCccccccc--cccccc--------
Q psy10547 68 LNKHVNTKVPLDLLYINNSAIR-NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFNG-------- 135 (269)
Q Consensus 68 l~~~~~~~~~l~~l~l~~~~i~-~l~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~l~--~~~~~~-------- 135 (269)
++..+.....|+.|++++|.+. .+|.+.|.... |++|++++|++++..|. ..+++|++|+ .|.+.+
T Consensus 85 ~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~ 162 (968)
T PLN00113 85 ISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGS 162 (968)
T ss_pred CChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhc
Confidence 3455566777888899888875 67777774443 77777777777654443 2344455433 222221
Q ss_pred -ccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEE
Q psy10547 136 -IFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTL 214 (269)
Q Consensus 136 -~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L 214 (269)
.+|++|++++|.+.+..|..+.++. +|++|++++|.+.+..+..+..+++|+.|++++|.+....+..+..+++|++|
T Consensus 163 l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 241 (968)
T PLN00113 163 FSSLKVLDLGGNVLVGKIPNSLTNLT-SLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHL 241 (968)
T ss_pred CCCCCEEECccCcccccCChhhhhCc-CCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEE
Confidence 1566666666666655555666665 66666666666655545555566666666666665544333355555666666
Q ss_pred EcCCCccc-cccccccCcCCCceeeeccCcccc-cc------cccceeecCCCCCCC
Q psy10547 215 KLSDNNLT-LYKNSFRGLELNNNLTLYKNSFRG-LE------LSLKNLNLKNTKLKS 263 (269)
Q Consensus 215 ~L~~n~l~-~~p~~~~~l~~L~~l~l~~n~~~~-l~------~~L~~L~l~~n~l~~ 263 (269)
++++|.++ .+|..++++++|+.|++++|.+.+ +| ++|++|++++|.+.+
T Consensus 242 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 298 (968)
T PLN00113 242 DLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG 298 (968)
T ss_pred ECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeecc
Confidence 66666554 345555555555555555555543 11 245555555555543
No 5
>KOG0444|consensus
Probab=99.79 E-value=1.2e-20 Score=165.55 Aligned_cols=185 Identities=25% Similarity=0.357 Sum_probs=131.9
Q ss_pred hhhccCCCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCC
Q psy10547 68 LNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCR 147 (269)
Q Consensus 68 l~~~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~ 147 (269)
+|..+..+..|+++++++|++.++|.+.-.-.++-.|++|+|+|..|+...|.+++ .|-+|||++|.
T Consensus 95 iP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLt-------------DLLfLDLS~Nr 161 (1255)
T KOG0444|consen 95 IPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLT-------------DLLFLDLSNNR 161 (1255)
T ss_pred CCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhH-------------hHhhhccccch
Confidence 34455566667777777777777776665555566777777777777666666666 66677888888
Q ss_pred CCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCC--CCCCCCcccCCCCCCEEEcCCCcccccc
Q psy10547 148 INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI--GKIPDDSFSTLNNLVTLKLSDNNLTLYK 225 (269)
Q Consensus 148 i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i--~~i~~~~~~~l~~L~~L~L~~n~l~~~p 225 (269)
+..++| ..+.+. .|+.|++++|++....-..+..+++|+.|.+++++- ..+|. ++..+.+|..++++.|.+..+|
T Consensus 162 Le~LPP-Q~RRL~-~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pt-sld~l~NL~dvDlS~N~Lp~vP 238 (1255)
T KOG0444|consen 162 LEMLPP-QIRRLS-MLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPT-SLDDLHNLRDVDLSENNLPIVP 238 (1255)
T ss_pred hhhcCH-HHHHHh-hhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCC-chhhhhhhhhccccccCCCcch
Confidence 777766 456676 788888888877655444455556666777776653 35554 6777788888888888888888
Q ss_pred ccccCcCCCceeeeccCcccccc------cccceeecCCCCCCCCCCCC
Q psy10547 226 NSFRGLELNNNLTLYKNSFRGLE------LSLKNLNLKNTKLKSVTPYW 268 (269)
Q Consensus 226 ~~~~~l~~L~~l~l~~n~~~~l~------~~L~~L~l~~n~l~~~p~~~ 268 (269)
+.+-++.+|+.|++++|.++.+. .++++|++|.|+++.+|+.+
T Consensus 239 ecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~av 287 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAV 287 (1255)
T ss_pred HHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHH
Confidence 88888888888888888887754 46778888888888777653
No 6
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.77 E-value=2.1e-18 Score=167.48 Aligned_cols=189 Identities=26% Similarity=0.319 Sum_probs=119.0
Q ss_pred CCCcccEEEecCCCccccCcCCCCCC-cccEEEecCCCCcccCcccccCCccccccc--cccccc---------ccccEE
Q psy10547 74 TKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFNG---------IFIKNL 141 (269)
Q Consensus 74 ~~~~l~~l~l~~~~i~~l~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~--~~~~~~---------~~L~~L 141 (269)
....|+.|++++|.+....+..+... +|+.|++++|.+.+..|..+.++++|++|+ .|.+.+ .+|+.|
T Consensus 138 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 217 (968)
T PLN00113 138 SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI 217 (968)
T ss_pred ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEE
Confidence 35567888888887764333333333 478888888887777777777777777664 222221 166777
Q ss_pred EcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcc
Q psy10547 142 QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221 (269)
Q Consensus 142 ~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l 221 (269)
++++|.+++..|..+..+. +|++|++++|.+++..+..+..+++|+.|++++|.+....+..+..+++|+.|++++|.+
T Consensus 218 ~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 296 (968)
T PLN00113 218 YLGYNNLSGEIPYEIGGLT-SLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL 296 (968)
T ss_pred ECcCCccCCcCChhHhcCC-CCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCee
Confidence 7777777766666676776 777777777777665556666677777777777766544444566666666666666666
Q ss_pred c-cccccccCcCCCceeeeccCccccc-c------cccceeecCCCCCCC
Q psy10547 222 T-LYKNSFRGLELNNNLTLYKNSFRGL-E------LSLKNLNLKNTKLKS 263 (269)
Q Consensus 222 ~-~~p~~~~~l~~L~~l~l~~n~~~~l-~------~~L~~L~l~~n~l~~ 263 (269)
. .+|..+..+++|+.|++++|.+.+. | ++|+.|++++|++.+
T Consensus 297 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 346 (968)
T PLN00113 297 SGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSG 346 (968)
T ss_pred ccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcC
Confidence 5 3555566666666666666655431 1 255555665555553
No 7
>KOG0617|consensus
Probab=99.75 E-value=2.6e-20 Score=139.17 Aligned_cols=157 Identities=25% Similarity=0.383 Sum_probs=121.1
Q ss_pred CCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCC
Q psy10547 95 TFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLE 174 (269)
Q Consensus 95 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~ 174 (269)
.|....++.|.+++|+++.++| ..+.+. +|+.|++++|++++++ ..++.++ +|+.|+++-|++.
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vpp-nia~l~-------------nlevln~~nnqie~lp-~~issl~-klr~lnvgmnrl~ 92 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPP-NIAELK-------------NLEVLNLSNNQIEELP-TSISSLP-KLRILNVGMNRLN 92 (264)
T ss_pred ccchhhhhhhhcccCceeecCC-cHHHhh-------------hhhhhhcccchhhhcC-hhhhhch-hhhheecchhhhh
Confidence 3444447788888888887755 456666 6778888888888874 4677787 8888888888887
Q ss_pred ccChhhhcCCCCCCEEeccCCCCC-CCCCCcccCCCCCCEEEcCCCccccccccccCcCCCceeeeccCcccccc-----
Q psy10547 175 QVPVETLRHLKNLTLIDLSKNKIG-KIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFRGLE----- 248 (269)
Q Consensus 175 ~~~~~~~~~l~~L~~L~l~~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~~l~l~~n~~~~l~----- 248 (269)
.+|. .|+.++.|+.||++.|.+. ...++.|..+..|+.|+|++|.++.+|+.++++++|+.|.++.|.+-.+|
T Consensus 93 ~lpr-gfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~ 171 (264)
T KOG0617|consen 93 ILPR-GFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGD 171 (264)
T ss_pred cCcc-ccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHH
Confidence 7774 4888888888888888773 22334666788888888888888888888888888888888888887776
Q ss_pred -cccceeecCCCCCCCCCCCC
Q psy10547 249 -LSLKNLNLKNTKLKSVTPYW 268 (269)
Q Consensus 249 -~~L~~L~l~~n~l~~~p~~~ 268 (269)
++|++|.+.+|+++-+||++
T Consensus 172 lt~lrelhiqgnrl~vlppel 192 (264)
T KOG0617|consen 172 LTRLRELHIQGNRLTVLPPEL 192 (264)
T ss_pred HHHHHHHhcccceeeecChhh
Confidence 46778888888888888875
No 8
>KOG0444|consensus
Probab=99.72 E-value=4.1e-19 Score=155.97 Aligned_cols=177 Identities=23% Similarity=0.332 Sum_probs=148.2
Q ss_pred CCCcccEEEecCCCcc--ccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCcc
Q psy10547 74 TKVPLDLLYINNSAIR--NINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSI 151 (269)
Q Consensus 74 ~~~~l~~l~l~~~~i~--~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~ 151 (269)
.+..|+.+.+++|++. .||.++|....|+.||+|+|+++.+ |..+...+ ++.+|+|++|+|..+
T Consensus 76 ~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~Ev-P~~LE~AK-------------n~iVLNLS~N~IetI 141 (1255)
T KOG0444|consen 76 DLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREV-PTNLEYAK-------------NSIVLNLSYNNIETI 141 (1255)
T ss_pred cchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhc-chhhhhhc-------------CcEEEEcccCccccC
Confidence 3344566777777654 6788888887788888888888876 55566666 788999999999999
Q ss_pred ChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccc--ccccccc
Q psy10547 152 TPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT--LYKNSFR 229 (269)
Q Consensus 152 ~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~--~~p~~~~ 229 (269)
+-..|-++. .|-.||+++|++..+||. .+.+..|++|++++|.+...--.-+..+++|+.|++++.+-+ .+|.++.
T Consensus 142 Pn~lfinLt-DLLfLDLS~NrLe~LPPQ-~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld 219 (1255)
T KOG0444|consen 142 PNSLFINLT-DLLFLDLSNNRLEMLPPQ-IRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLD 219 (1255)
T ss_pred CchHHHhhH-hHhhhccccchhhhcCHH-HHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchh
Confidence 888899998 899999999999999975 888999999999999886554445667788999999988755 6899999
Q ss_pred CcCCCceeeeccCcccccc------cccceeecCCCCCCCCCC
Q psy10547 230 GLELNNNLTLYKNSFRGLE------LSLKNLNLKNTKLKSVTP 266 (269)
Q Consensus 230 ~l~~L~~l~l~~n~~~~l~------~~L~~L~l~~n~l~~~p~ 266 (269)
.+.+|..+|++.|.+..+| .+|+.|+||+|+|+++--
T Consensus 220 ~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~ 262 (1255)
T KOG0444|consen 220 DLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNM 262 (1255)
T ss_pred hhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeec
Confidence 9999999999999999887 689999999999998754
No 9
>KOG0472|consensus
Probab=99.72 E-value=1.1e-19 Score=151.85 Aligned_cols=187 Identities=24% Similarity=0.345 Sum_probs=145.5
Q ss_pred cccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCccccccc----------ccccccccccEEEcCCC
Q psy10547 77 PLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN----------ENTFNGIFIKNLQLSHC 146 (269)
Q Consensus 77 ~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~----------~~~~~~~~L~~L~l~~n 146 (269)
.+..++.++|.+..+|....+...+.+++.++|++..+.+. +..+..++.++ .+.+...++..+++.+|
T Consensus 92 ~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~-i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n 170 (565)
T KOG0472|consen 92 ALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDS-IGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGN 170 (565)
T ss_pred HHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCch-HHHHhhhhhhhccccccccCchHHHHHHHHHHhhcccc
Confidence 35667777777777777777777777777777777766443 33333343332 23333337888899999
Q ss_pred CCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccc
Q psy10547 147 RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN 226 (269)
Q Consensus 147 ~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~ 226 (269)
.+...+|+.+. ++ .|+++|..+|-+..+|++ ++.+.+|+.|++..|++..+|. |.++..|++++++.|+|+.+|.
T Consensus 171 ~l~~l~~~~i~-m~-~L~~ld~~~N~L~tlP~~-lg~l~~L~~LyL~~Nki~~lPe--f~gcs~L~Elh~g~N~i~~lpa 245 (565)
T KOG0472|consen 171 KLKALPENHIA-MK-RLKHLDCNSNLLETLPPE-LGGLESLELLYLRRNKIRFLPE--FPGCSLLKELHVGENQIEMLPA 245 (565)
T ss_pred chhhCCHHHHH-HH-HHHhcccchhhhhcCChh-hcchhhhHHHHhhhcccccCCC--CCccHHHHHHHhcccHHHhhHH
Confidence 99988887765 77 899999999999988865 8889999999999999999984 8888889999999999988887
Q ss_pred ccc-CcCCCceeeeccCcccccc------cccceeecCCCCCCCCCCCCC
Q psy10547 227 SFR-GLELNNNLTLYKNSFRGLE------LSLKNLNLKNTKLKSVTPYWR 269 (269)
Q Consensus 227 ~~~-~l~~L~~l~l~~n~~~~l~------~~L~~L~l~~n~l~~~p~~~~ 269 (269)
+.. +++++..||++.|+++++| ++|..||+|+|.|+.+|++++
T Consensus 246 e~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~sLg 295 (565)
T KOG0472|consen 246 EHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPYSLG 295 (565)
T ss_pred HHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCcccc
Confidence 655 8899999999999999887 678899999999999998764
No 10
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.68 E-value=1.9e-16 Score=147.12 Aligned_cols=172 Identities=22% Similarity=0.370 Sum_probs=92.7
Q ss_pred ccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccc--cccccccc------cccEEEcCCCCCC
Q psy10547 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI------FIKNLQLSHCRIN 149 (269)
Q Consensus 78 l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l--~~~~~~~~------~L~~L~l~~n~i~ 149 (269)
++.|++++|.+..+|...+. +|++|++++|.++.++.... .+|+.| +.|.+... +|+.|++++|.++
T Consensus 201 L~~L~Ls~N~LtsLP~~l~~--nL~~L~Ls~N~LtsLP~~l~---~~L~~L~Ls~N~L~~LP~~l~s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 201 ITTLILDNNELKSLPENLQG--NIKTLYANSNQLTSIPATLP---DTIQEMELSINRITELPERLPSALQSLDLFHNKIS 275 (754)
T ss_pred CcEEEecCCCCCcCChhhcc--CCCEEECCCCccccCChhhh---ccccEEECcCCccCcCChhHhCCCCEEECcCCccC
Confidence 58889999998888877653 57888888888887643222 223322 12222211 5666677776666
Q ss_pred ccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcccccccccc
Q psy10547 150 SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFR 229 (269)
Q Consensus 150 ~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~ 229 (269)
.++. .+. . +|+.|++++|+++.++.. +. ++|+.|++++|.++.+|.. + .++|+.|++++|.++.+|..+.
T Consensus 276 ~LP~-~l~--~-sL~~L~Ls~N~Lt~LP~~-lp--~sL~~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~Lt~LP~~l~ 345 (754)
T PRK15370 276 CLPE-NLP--E-ELRYLSVYDNSIRTLPAH-LP--SGITHLNVQSNSLTALPET-L--PPGLKTLEAGENALTSLPASLP 345 (754)
T ss_pred cccc-ccC--C-CCcEEECCCCccccCccc-ch--hhHHHHHhcCCccccCCcc-c--cccceeccccCCccccCChhhc
Confidence 5432 221 2 566667766666665432 11 2344444555544444431 1 1345555555555555544332
Q ss_pred CcCCCceeeeccCcccccc----cccceeecCCCCCCCCCC
Q psy10547 230 GLELNNNLTLYKNSFRGLE----LSLKNLNLKNTKLKSVTP 266 (269)
Q Consensus 230 ~l~~L~~l~l~~n~~~~l~----~~L~~L~l~~n~l~~~p~ 266 (269)
++|+.|++++|+|..+| ++|++|++++|+|+.+|+
T Consensus 346 --~sL~~L~Ls~N~L~~LP~~lp~~L~~LdLs~N~Lt~LP~ 384 (754)
T PRK15370 346 --PELQVLDVSKNQITVLPETLPPTITTLDVSRNALTNLPE 384 (754)
T ss_pred --CcccEEECCCCCCCcCChhhcCCcCEEECCCCcCCCCCH
Confidence 34555555555554332 345555555555555554
No 11
>KOG4237|consensus
Probab=99.67 E-value=9.9e-18 Score=139.83 Aligned_cols=149 Identities=28% Similarity=0.426 Sum_probs=132.1
Q ss_pred cEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHhh
Q psy10547 79 DLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRH 158 (269)
Q Consensus 79 ~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 158 (269)
.+++.++-.+.++|.+.-... +.++|..|+|+.|++++|+.++ +|+.|||++|+|+.+.|++|.+
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~t--veirLdqN~I~~iP~~aF~~l~-------------~LRrLdLS~N~Is~I~p~AF~G 113 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPET--VEIRLDQNQISSIPPGAFKTLH-------------RLRRLDLSKNNISFIAPDAFKG 113 (498)
T ss_pred ceEEccCCCcccCcccCCCcc--eEEEeccCCcccCChhhccchh-------------hhceecccccchhhcChHhhhh
Confidence 568888888999998875544 8899999999999999999999 8888999999999999999999
Q ss_pred ccccccEEEccC-CCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccc-cccCcCCCce
Q psy10547 159 LEFTLKHLNLQE-NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNN 236 (269)
Q Consensus 159 l~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~-~~~~l~~L~~ 236 (269)
+. ++..|-+-+ |+|+.++.+.|.++..++.|.+.-|++.-+..++|..++++..|.+.+|.+..+++ .+..+..++.
T Consensus 114 L~-~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~t 192 (498)
T KOG4237|consen 114 LA-SLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKT 192 (498)
T ss_pred hH-hhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccch
Confidence 99 666665555 99999999999999999999999999999998899999999999999999988876 7888888888
Q ss_pred eeeccCc
Q psy10547 237 LTLYKNS 243 (269)
Q Consensus 237 l~l~~n~ 243 (269)
+.+..|.
T Consensus 193 lhlA~np 199 (498)
T KOG4237|consen 193 LHLAQNP 199 (498)
T ss_pred HhhhcCc
Confidence 8777765
No 12
>KOG0617|consensus
Probab=99.66 E-value=6.7e-19 Score=131.62 Aligned_cols=170 Identities=23% Similarity=0.318 Sum_probs=152.0
Q ss_pred CCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccCh
Q psy10547 74 TKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITP 153 (269)
Q Consensus 74 ~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~ 153 (269)
.+...+-|.+++|.+..+|+++-...+|+.|++++|++... |.....++ .|+.|+++.|.+... |
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~l-p~~issl~-------------klr~lnvgmnrl~~l-p 95 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEEL-PTSISSLP-------------KLRILNVGMNRLNIL-P 95 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhc-Chhhhhch-------------hhhheecchhhhhcC-c
Confidence 55667889999999999999999989999999999999988 55677888 788899999988755 6
Q ss_pred hHHhhccccccEEEccCCCCCc-cChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcC
Q psy10547 154 NAFRHLEFTLKHLNLQENDLEQ-VPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232 (269)
Q Consensus 154 ~~~~~l~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~ 232 (269)
..|+.++ .|+.||+.+|++.. ..|+.|..+..|+.|.+++|.+.-+|+ .++.+++|+.|.+.+|.+-++|..++.++
T Consensus 96 rgfgs~p-~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~-dvg~lt~lqil~lrdndll~lpkeig~lt 173 (264)
T KOG0617|consen 96 RGFGSFP-ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPP-DVGKLTNLQILSLRDNDLLSLPKEIGDLT 173 (264)
T ss_pred cccCCCc-hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCCh-hhhhhcceeEEeeccCchhhCcHHHHHHH
Confidence 7899998 99999999999884 445778888999999999999999987 58999999999999999999999999999
Q ss_pred CCceeeeccCcccccccccceeecCCCC
Q psy10547 233 LNNNLTLYKNSFRGLELSLKNLNLKNTK 260 (269)
Q Consensus 233 ~L~~l~l~~n~~~~l~~~L~~L~l~~n~ 260 (269)
.|+.|.+.+|+++-+|+.+..||+-+++
T Consensus 174 ~lrelhiqgnrl~vlppel~~l~l~~~k 201 (264)
T KOG0617|consen 174 RLRELHIQGNRLTVLPPELANLDLVGNK 201 (264)
T ss_pred HHHHHhcccceeeecChhhhhhhhhhhH
Confidence 9999999999999999899988887764
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.64 E-value=3.2e-15 Score=138.63 Aligned_cols=199 Identities=19% Similarity=0.230 Sum_probs=99.5
Q ss_pred CcceeecCCCCceEEEecCCCCCchhhhhhhhccCCCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCccc
Q psy10547 39 STCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNA 118 (269)
Q Consensus 39 ~~C~C~~~~~~~~~v~C~~~~~~~~~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~ 118 (269)
..+.|.......+.+...+++.+| ..++. .++.|++.+|.+..+|.. ..+|++|++++|+++.+++ .
T Consensus 194 r~~~Cl~~~~~~LdLs~~~LtsLP---~~l~~------~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsLP~-l 260 (788)
T PRK15387 194 KMRACLNNGNAVLNVGESGLTTLP---DCLPA------HITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSLPV-L 260 (788)
T ss_pred HHHHHhcCCCcEEEcCCCCCCcCC---cchhc------CCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcccC-c
Confidence 334554433334434444444444 33333 358888888888888753 2348888888888887742 2
Q ss_pred ccCCccccccc--cccccc-----ccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChh--hh--------
Q psy10547 119 FRHLDAIRNIN--ENTFNG-----IFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE--TL-------- 181 (269)
Q Consensus 119 ~~~l~~L~~l~--~~~~~~-----~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~--~~-------- 181 (269)
+ ++|+.|+ .|.+.. .+|+.|++++|.++.++. ..+ +|+.|++++|+++.++.. .+
T Consensus 261 p---~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~LP~----~p~-~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N 332 (788)
T PRK15387 261 P---PGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPV----LPP-GLQELSVSDNQLASLPALPSELCKLWAYNN 332 (788)
T ss_pred c---cccceeeccCCchhhhhhchhhcCEEECcCCccccccc----ccc-ccceeECCCCccccCCCCcccccccccccC
Confidence 2 3333332 222221 145556666666655432 122 566666666665554320 00
Q ss_pred --c----CCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCceeeeccCcccccc---cccc
Q psy10547 182 --R----HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFRGLE---LSLK 252 (269)
Q Consensus 182 --~----~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~~l~l~~n~~~~l~---~~L~ 252 (269)
. ...+|+.|++++|+++.+|.. ..+|+.|++++|+++.+|... .+|+.|++++|.|+++| ++|+
T Consensus 333 ~L~~LP~lp~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt~LP~l~s~L~ 405 (788)
T PRK15387 333 QLTSLPTLPSGLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTSLPVLPSELK 405 (788)
T ss_pred ccccccccccccceEecCCCccCCCCCC----CcccceehhhccccccCcccc---cccceEEecCCcccCCCCcccCCC
Confidence 0 013566777777777666531 123444444444444444221 23445555555554433 3444
Q ss_pred eeecCCCCCCCCC
Q psy10547 253 NLNLKNTKLKSVT 265 (269)
Q Consensus 253 ~L~l~~n~l~~~p 265 (269)
.|++++|+|+.+|
T Consensus 406 ~LdLS~N~LssIP 418 (788)
T PRK15387 406 ELMVSGNRLTSLP 418 (788)
T ss_pred EEEccCCcCCCCC
Confidence 4555555444444
No 14
>KOG0472|consensus
Probab=99.63 E-value=1.3e-18 Score=145.50 Aligned_cols=188 Identities=21% Similarity=0.340 Sum_probs=147.0
Q ss_pred cCCCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccc----------cccccccccccEE
Q psy10547 72 VNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNI----------NENTFNGIFIKNL 141 (269)
Q Consensus 72 ~~~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l----------~~~~~~~~~L~~L 141 (269)
......+..+++++|.+..++++.+....++.++..+|++...++ .+..+.++..+ .++...-..+++|
T Consensus 110 i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~-~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~l 188 (565)
T KOG0472|consen 110 IGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSLPE-DMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHL 188 (565)
T ss_pred HhhhhhhhhhhccccceeecCchHHHHhhhhhhhccccccccCch-HHHHHHHHHHhhccccchhhCCHHHHHHHHHHhc
Confidence 334444566777777777777777666666667777777666633 33333333322 1222222279999
Q ss_pred EcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcc
Q psy10547 142 QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221 (269)
Q Consensus 142 ~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l 221 (269)
|...|-++.++| .++.+. +|.-|++.+|++..+| .|.++..|..+.++.|+|.-+|....++++++.+||+.+|++
T Consensus 189 d~~~N~L~tlP~-~lg~l~-~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNkl 264 (565)
T KOG0472|consen 189 DCNSNLLETLPP-ELGGLE-SLELLYLRRNKIRFLP--EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKL 264 (565)
T ss_pred ccchhhhhcCCh-hhcchh-hhHHHHhhhcccccCC--CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeecccccc
Confidence 999999998865 678888 9999999999999998 599999999999999999999988788999999999999999
Q ss_pred ccccccccCcCCCceeeeccCccccccc-----ccceeecCCCCCCCC
Q psy10547 222 TLYKNSFRGLELNNNLTLYKNSFRGLEL-----SLKNLNLKNTKLKSV 264 (269)
Q Consensus 222 ~~~p~~~~~l~~L~~l~l~~n~~~~l~~-----~L~~L~l~~n~l~~~ 264 (269)
.++|..+..+.+|+.||+++|.++++|. .|+.|.+.+|++..+
T Consensus 265 ke~Pde~clLrsL~rLDlSNN~is~Lp~sLgnlhL~~L~leGNPlrTi 312 (565)
T KOG0472|consen 265 KEVPDEICLLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPLRTI 312 (565)
T ss_pred ccCchHHHHhhhhhhhcccCCccccCCcccccceeeehhhcCCchHHH
Confidence 9999999999999999999999999884 466677888888764
No 15
>KOG0618|consensus
Probab=99.62 E-value=3.2e-17 Score=149.27 Aligned_cols=191 Identities=24% Similarity=0.301 Sum_probs=156.2
Q ss_pred hhhhccCCCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcc-ccccc-----------ccccc
Q psy10547 67 TLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDA-IRNIN-----------ENTFN 134 (269)
Q Consensus 67 ~l~~~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~l~-----------~~~~~ 134 (269)
++|........|..+.+.+|.+..+|+..-....|++|++..|++...++..|.-+.. ++.++ .+.+.
T Consensus 278 ~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~ 357 (1081)
T KOG0618|consen 278 ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENN 357 (1081)
T ss_pred hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchh
Confidence 3444445666678888888888888876655555888888888888776655544433 33222 11111
Q ss_pred cccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEE
Q psy10547 135 GIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTL 214 (269)
Q Consensus 135 ~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L 214 (269)
...|+.|++.+|.+++-....+.+.+ .|+.|+|++|++..+|+..+.+++.|+.|++|||+++.++. .+..+..|++|
T Consensus 358 ~~~Lq~LylanN~Ltd~c~p~l~~~~-hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~-tva~~~~L~tL 435 (1081)
T KOG0618|consen 358 HAALQELYLANNHLTDSCFPVLVNFK-HLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPD-TVANLGRLHTL 435 (1081)
T ss_pred hHHHHHHHHhcCcccccchhhhcccc-ceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhH-HHHhhhhhHHH
Confidence 22789999999999998777888998 99999999999999999999999999999999999999995 78899999999
Q ss_pred EcCCCccccccccccCcCCCceeeeccCcccc------cc-cccceeecCCCC
Q psy10547 215 KLSDNNLTLYKNSFRGLELNNNLTLYKNSFRG------LE-LSLKNLNLKNTK 260 (269)
Q Consensus 215 ~L~~n~l~~~p~~~~~l~~L~~l~l~~n~~~~------l~-~~L~~L~l~~n~ 260 (269)
....|++..+| .+..++.|+.+|++.|+++. +| ++|++||+++|.
T Consensus 436 ~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 436 RAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 99999999999 89999999999999999986 35 799999999997
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.60 E-value=3.5e-15 Score=138.32 Aligned_cols=94 Identities=21% Similarity=0.236 Sum_probs=49.1
Q ss_pred cccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCceeeecc
Q psy10547 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYK 241 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~~l~l~~ 241 (269)
+|++|++++|+++.++.. ..+|+.|++++|.+..+|.. ..+|+.|++++|.|+.+|... +.|+.|++++
T Consensus 343 ~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~l----~~~L~~LdLs~N~Lt~LP~l~---s~L~~LdLS~ 411 (788)
T PRK15387 343 GLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPAL----PSGLKELIVSGNRLTSLPVLP---SELKELMVSG 411 (788)
T ss_pred ccceEecCCCccCCCCCC----CcccceehhhccccccCccc----ccccceEEecCCcccCCCCcc---cCCCEEEccC
Confidence 577777777777776531 23455555666665555431 134555555555555544322 3344555555
Q ss_pred Ccccccc---cccceeecCCCCCCCCCC
Q psy10547 242 NSFRGLE---LSLKNLNLKNTKLKSVTP 266 (269)
Q Consensus 242 n~~~~l~---~~L~~L~l~~n~l~~~p~ 266 (269)
|.++.+| .+|+.|++++|+|+.+|.
T Consensus 412 N~LssIP~l~~~L~~L~Ls~NqLt~LP~ 439 (788)
T PRK15387 412 NRLTSLPMLPSGLLSLSVYRNQLTRLPE 439 (788)
T ss_pred CcCCCCCcchhhhhhhhhccCcccccCh
Confidence 5554443 234444555555554443
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.60 E-value=1.9e-15 Score=140.58 Aligned_cols=174 Identities=20% Similarity=0.336 Sum_probs=122.6
Q ss_pred cccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCccccccc--cccccc------ccccEEEcCCCCC
Q psy10547 77 PLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFNG------IFIKNLQLSHCRI 148 (269)
Q Consensus 77 ~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~--~~~~~~------~~L~~L~l~~n~i 148 (269)
+|+.|++++|.+..+|..... .|+.|++++|.+..++.... .+|+.|+ .|.+.. .+|+.|++++|.+
T Consensus 221 nL~~L~Ls~N~LtsLP~~l~~--~L~~L~Ls~N~L~~LP~~l~---s~L~~L~Ls~N~L~~LP~~l~~sL~~L~Ls~N~L 295 (754)
T PRK15370 221 NIKTLYANSNQLTSIPATLPD--TIQEMELSINRITELPERLP---SALQSLDLFHNKISCLPENLPEELRYLSVYDNSI 295 (754)
T ss_pred CCCEEECCCCccccCChhhhc--cccEEECcCCccCcCChhHh---CCCCEEECcCCccCccccccCCCCcEEECCCCcc
Confidence 578888888888888765432 37888888888776643322 2344332 222221 2788999999999
Q ss_pred CccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccc
Q psy10547 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSF 228 (269)
Q Consensus 149 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~ 228 (269)
+.++. .+. . +|+.|++++|+++.++... .++|+.|++++|.++.+|. .+. ++|+.|++++|+++.+|..+
T Consensus 296 t~LP~-~lp--~-sL~~L~Ls~N~Lt~LP~~l---~~sL~~L~Ls~N~Lt~LP~-~l~--~sL~~L~Ls~N~L~~LP~~l 365 (754)
T PRK15370 296 RTLPA-HLP--S-GITHLNVQSNSLTALPETL---PPGLKTLEAGENALTSLPA-SLP--PELQVLDVSKNQITVLPETL 365 (754)
T ss_pred ccCcc-cch--h-hHHHHHhcCCccccCCccc---cccceeccccCCccccCCh-hhc--CcccEEECCCCCCCcCChhh
Confidence 87753 221 2 6888888888888776432 2578888888888888775 332 67888888888888777655
Q ss_pred cCcCCCceeeeccCcccccc----cccceeecCCCCCCCCCCC
Q psy10547 229 RGLELNNNLTLYKNSFRGLE----LSLKNLNLKNTKLKSVTPY 267 (269)
Q Consensus 229 ~~l~~L~~l~l~~n~~~~l~----~~L~~L~l~~n~l~~~p~~ 267 (269)
. ++|+.|++++|.+..+| ..|+.|++++|+|+.+|..
T Consensus 366 p--~~L~~LdLs~N~Lt~LP~~l~~sL~~LdLs~N~L~~LP~s 406 (754)
T PRK15370 366 P--PTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRLPES 406 (754)
T ss_pred c--CCcCEEECCCCcCCCCCHhHHHHHHHHhhccCCcccCchh
Confidence 3 57888888888888776 4577888888888887754
No 18
>KOG0618|consensus
Probab=99.51 E-value=6e-16 Score=141.12 Aligned_cols=173 Identities=24% Similarity=0.311 Sum_probs=126.1
Q ss_pred ccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHh
Q psy10547 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR 157 (269)
Q Consensus 78 l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~ 157 (269)
++.++..+|++..+|...+....|+.|.+..|.+..+.+ ...+++ ++++|+|..|.+...++..|.
T Consensus 266 le~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~-~le~~~-------------sL~tLdL~~N~L~~lp~~~l~ 331 (1081)
T KOG0618|consen 266 LEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPP-FLEGLK-------------SLRTLDLQSNNLPSLPDNFLA 331 (1081)
T ss_pred ceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCC-cccccc-------------eeeeeeehhccccccchHHHh
Confidence 344444444444444444444444444444444444422 233334 677788888877766543332
Q ss_pred hcc------------------------ccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCE
Q psy10547 158 HLE------------------------FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213 (269)
Q Consensus 158 ~l~------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~ 213 (269)
... +.|+.|.+.+|.++.-.-..+....+|+.|+|++|+++.+|+..+..+..|++
T Consensus 332 v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~Lee 411 (1081)
T KOG0618|consen 332 VLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEE 411 (1081)
T ss_pred hhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHH
Confidence 111 25777778888877655556888899999999999999999999999999999
Q ss_pred EEcCCCccccccccccCcCCCceeeeccCcccccc-----cccceeecCCCCCCCC
Q psy10547 214 LKLSDNNLTLYKNSFRGLELNNNLTLYKNSFRGLE-----LSLKNLNLKNTKLKSV 264 (269)
Q Consensus 214 L~L~~n~l~~~p~~~~~l~~L~~l~l~~n~~~~l~-----~~L~~L~l~~n~l~~~ 264 (269)
|+|++|.++.+|..+-.+..|++|....|++..+| +.|+++|++.|.|+++
T Consensus 412 L~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~ 467 (1081)
T KOG0618|consen 412 LNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEV 467 (1081)
T ss_pred HhcccchhhhhhHHHHhhhhhHHHhhcCCceeechhhhhcCcceEEecccchhhhh
Confidence 99999999999999999999999999999998876 6899999999999863
No 19
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.39 E-value=5e-12 Score=124.47 Aligned_cols=81 Identities=27% Similarity=0.356 Sum_probs=47.2
Q ss_pred CCCCEEeccCCCC-CCCCCCcccCCCCCCEEEcCCC-ccccccccccCcCCCceeeeccCc-cc---ccccccceeecCC
Q psy10547 185 KNLTLIDLSKNKI-GKIPDDSFSTLNNLVTLKLSDN-NLTLYKNSFRGLELNNNLTLYKNS-FR---GLELSLKNLNLKN 258 (269)
Q Consensus 185 ~~L~~L~l~~n~i-~~i~~~~~~~l~~L~~L~L~~n-~l~~~p~~~~~l~~L~~l~l~~n~-~~---~l~~~L~~L~l~~ 258 (269)
++|+.|++++|.. ..+|. .+.++++|+.|++++| .+..+|..+ .+++|+.|++++|. +. .++.+++.|++++
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~-si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~ 855 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPS-SIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNLSR 855 (1153)
T ss_pred ccchheeCCCCCCccccCh-hhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccccCEeECCC
Confidence 3566666666643 44443 5666777777777765 455566544 55666666666542 22 2234666666666
Q ss_pred CCCCCCCCC
Q psy10547 259 TKLKSVTPY 267 (269)
Q Consensus 259 n~l~~~p~~ 267 (269)
|.++.+|.+
T Consensus 856 n~i~~iP~s 864 (1153)
T PLN03210 856 TGIEEVPWW 864 (1153)
T ss_pred CCCccChHH
Confidence 666666644
No 20
>KOG0532|consensus
Probab=99.38 E-value=7.3e-15 Score=127.98 Aligned_cols=173 Identities=25% Similarity=0.322 Sum_probs=131.0
Q ss_pred CcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhH
Q psy10547 76 VPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNA 155 (269)
Q Consensus 76 ~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~ 155 (269)
..-...+++.|.+..+|.++-....|+.+.+..|.+..+ |.+...+. .+.+++++.|+++.++. .
T Consensus 75 tdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~i-p~~i~~L~-------------~lt~l~ls~NqlS~lp~-~ 139 (722)
T KOG0532|consen 75 TDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTI-PEAICNLE-------------ALTFLDLSSNQLSHLPD-G 139 (722)
T ss_pred cchhhhhccccccccCchHHHHHHHHHHHHHHhccceec-chhhhhhh-------------HHHHhhhccchhhcCCh-h
Confidence 334556677777777766654444566667777776666 44555555 67778888888887755 4
Q ss_pred HhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCc
Q psy10547 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNN 235 (269)
Q Consensus 156 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~ 235 (269)
+-.++ |+.|-+++|+++.++.+ ++.+..|..||.+.|.+..+++ -+.++.+|+.|.+.+|++..+|+.+..++ |.
T Consensus 140 lC~lp--Lkvli~sNNkl~~lp~~-ig~~~tl~~ld~s~nei~slps-ql~~l~slr~l~vrRn~l~~lp~El~~Lp-Li 214 (722)
T KOG0532|consen 140 LCDLP--LKVLIVSNNKLTSLPEE-IGLLPTLAHLDVSKNEIQSLPS-QLGYLTSLRDLNVRRNHLEDLPEELCSLP-LI 214 (722)
T ss_pred hhcCc--ceeEEEecCccccCCcc-cccchhHHHhhhhhhhhhhchH-HhhhHHHHHHHHHhhhhhhhCCHHHhCCc-ee
Confidence 44565 88888888888888754 6678888888888888888887 47788888888888888888888888654 78
Q ss_pred eeeeccCcccccc------cccceeecCCCCCCCCCCCC
Q psy10547 236 NLTLYKNSFRGLE------LSLKNLNLKNTKLKSVTPYW 268 (269)
Q Consensus 236 ~l~l~~n~~~~l~------~~L~~L~l~~n~l~~~p~~~ 268 (269)
.||++.|++..+| +.|++|-|.+|+++..|.+|
T Consensus 215 ~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSPPAqI 253 (722)
T KOG0532|consen 215 RLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSPPAQI 253 (722)
T ss_pred eeecccCceeecchhhhhhhhheeeeeccCCCCCChHHH
Confidence 8888888888877 67888888889888888764
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.36 E-value=3.6e-13 Score=114.77 Aligned_cols=187 Identities=21% Similarity=0.278 Sum_probs=129.3
Q ss_pred hhhhhhccCCCCcccEEEecCCCccccCc------CCCC-CCcccEEEecCCCCcccCcccccCCccccccccccccccc
Q psy10547 65 KATLNKHVNTKVPLDLLYINNSAIRNINE------NTFN-GIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137 (269)
Q Consensus 65 ~~~l~~~~~~~~~l~~l~l~~~~i~~l~~------~~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~ 137 (269)
...++..+.....++.++++++.+...+. ..+. ...|++|++++|.+....+..+..+.+- .+
T Consensus 40 ~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~----------~~ 109 (319)
T cd00116 40 AKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRS----------SS 109 (319)
T ss_pred HHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhcc----------Cc
Confidence 33455555555667888888776653111 1222 2238888888888876555555444410 04
Q ss_pred ccEEEcCCCCCCccC----hhHHhhc-cccccEEEccCCCCCcc----ChhhhcCCCCCCEEeccCCCCCCCC----CCc
Q psy10547 138 IKNLQLSHCRINSIT----PNAFRHL-EFTLKHLNLQENDLEQV----PVETLRHLKNLTLIDLSKNKIGKIP----DDS 204 (269)
Q Consensus 138 L~~L~l~~n~i~~~~----~~~~~~l-~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~i~~i~----~~~ 204 (269)
++.|++++|.+++.. ...+... + +|++|++++|.++.- ....+..+++|+.|++++|.++... ...
T Consensus 110 L~~L~ls~~~~~~~~~~~l~~~l~~~~~-~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 188 (319)
T cd00116 110 LQELKLNNNGLGDRGLRLLAKGLKDLPP-ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEG 188 (319)
T ss_pred ccEEEeeCCccchHHHHHHHHHHHhCCC-CceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHH
Confidence 899999999887422 2344555 5 899999999998832 2245667789999999999887421 113
Q ss_pred ccCCCCCCEEEcCCCcccc-----ccccccCcCCCceeeeccCccccc---------c---cccceeecCCCCCC
Q psy10547 205 FSTLNNLVTLKLSDNNLTL-----YKNSFRGLELNNNLTLYKNSFRGL---------E---LSLKNLNLKNTKLK 262 (269)
Q Consensus 205 ~~~l~~L~~L~L~~n~l~~-----~p~~~~~l~~L~~l~l~~n~~~~l---------~---~~L~~L~l~~n~l~ 262 (269)
+...++|+.|++++|.++. +...+..+++|++|++++|.+.+. + ..|+.|++++|.++
T Consensus 189 l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 4455799999999999862 445677889999999999988851 1 58999999999986
No 22
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.33 E-value=1.4e-12 Score=111.05 Aligned_cols=189 Identities=23% Similarity=0.289 Sum_probs=135.2
Q ss_pred chhhhhhhhccCCCCcccEEEecCCCccccCcCCCC----CCcccEEEecCCCCcccC----cccccCC-cccccccccc
Q psy10547 62 PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFN----GIFIKNLQLSHCRINSIT----PNAFRHL-DAIRNINENT 132 (269)
Q Consensus 62 ~~~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~~~----~~~L~~L~l~~n~l~~~~----~~~~~~l-~~L~~l~~~~ 132 (269)
+.....++..+.....++.|+++++.+.......+. ...|++|++++|.+.... ...+..+ +
T Consensus 67 ~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~--------- 137 (319)
T cd00116 67 PRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPP--------- 137 (319)
T ss_pred chHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCC---------
Confidence 455556666666788899999999998743333221 123999999999987422 2233444 4
Q ss_pred cccccccEEEcCCCCCCccC----hhHHhhccccccEEEccCCCCCcc----ChhhhcCCCCCCEEeccCCCCCCCCC--
Q psy10547 133 FNGIFIKNLQLSHCRINSIT----PNAFRHLEFTLKHLNLQENDLEQV----PVETLRHLKNLTLIDLSKNKIGKIPD-- 202 (269)
Q Consensus 133 ~~~~~L~~L~l~~n~i~~~~----~~~~~~l~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~i~~i~~-- 202 (269)
+++.|++++|.+++.. ...+.... +|++|++++|.+++. ....+..+++|+.|++++|.++....
T Consensus 138 ----~L~~L~L~~n~l~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 212 (319)
T cd00116 138 ----ALEKLVLGRNRLEGASCEALAKALRANR-DLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASA 212 (319)
T ss_pred ----CceEEEcCCCcCCchHHHHHHHHHHhCC-CcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHH
Confidence 7899999999998432 23455566 899999999998842 12345566899999999999864432
Q ss_pred --CcccCCCCCCEEEcCCCccccc-ccccc-----CcCCCceeeeccCcccc---------cc--cccceeecCCCCCCC
Q psy10547 203 --DSFSTLNNLVTLKLSDNNLTLY-KNSFR-----GLELNNNLTLYKNSFRG---------LE--LSLKNLNLKNTKLKS 263 (269)
Q Consensus 203 --~~~~~l~~L~~L~L~~n~l~~~-p~~~~-----~l~~L~~l~l~~n~~~~---------l~--~~L~~L~l~~n~l~~ 263 (269)
..+..+++|++|++++|.++.. ...+. ....|++|++++|.+++ ++ ++|+++++++|.++.
T Consensus 213 l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 213 LAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 2456778999999999998741 11111 24789999999999963 22 579999999999985
Q ss_pred C
Q psy10547 264 V 264 (269)
Q Consensus 264 ~ 264 (269)
.
T Consensus 293 ~ 293 (319)
T cd00116 293 E 293 (319)
T ss_pred H
Confidence 4
No 23
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.32 E-value=3.3e-11 Score=118.75 Aligned_cols=100 Identities=18% Similarity=0.294 Sum_probs=54.8
Q ss_pred cccEEEccCCCCCccChhhhcCCCCCCEEeccCC-CCCCCCCCcccCCCCCCEEEcCCC-ccccccccccCcCCCceeee
Q psy10547 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN-KIGKIPDDSFSTLNNLVTLKLSDN-NLTLYKNSFRGLELNNNLTL 239 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~i~~i~~~~~~~l~~L~~L~L~~n-~l~~~p~~~~~l~~L~~l~l 239 (269)
+|+.|++++|......|..++.+++|+.|++++| .+..+|.. + .+++|+.|++++| .+..+|.. ..+++.|++
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~-~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTG-I-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCC-C-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 5677777776544434455777888888888776 35666543 2 4555666666554 23333321 234455555
Q ss_pred ccCcccccc------cccceeecCC-CCCCCCCC
Q psy10547 240 YKNSFRGLE------LSLKNLNLKN-TKLKSVTP 266 (269)
Q Consensus 240 ~~n~~~~l~------~~L~~L~l~~-n~l~~~p~ 266 (269)
++|.++.+| ++|++|++++ ++++.+|.
T Consensus 854 s~n~i~~iP~si~~l~~L~~L~L~~C~~L~~l~~ 887 (1153)
T PLN03210 854 SRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSL 887 (1153)
T ss_pred CCCCCccChHHHhcCCCCCEEECCCCCCcCccCc
Confidence 555555443 3455555554 34444443
No 24
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.31 E-value=2.4e-12 Score=99.26 Aligned_cols=120 Identities=28% Similarity=0.382 Sum_probs=41.9
Q ss_pred ccEEEecCCCCcccCccccc-CCcccccccccccccccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChh
Q psy10547 101 IKNLQLSHCRINSITPNAFR-HLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179 (269)
Q Consensus 101 L~~L~l~~n~l~~~~~~~~~-~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 179 (269)
+++|++++|.|+.|.. +. .+. +++.|++++|.|+.+. .+..+. .|++|++++|+++.+...
T Consensus 21 ~~~L~L~~n~I~~Ie~--L~~~l~-------------~L~~L~Ls~N~I~~l~--~l~~L~-~L~~L~L~~N~I~~i~~~ 82 (175)
T PF14580_consen 21 LRELNLRGNQISTIEN--LGATLD-------------KLEVLDLSNNQITKLE--GLPGLP-RLKTLDLSNNRISSISEG 82 (175)
T ss_dssp ---------------S----TT-T-------------T--EEE-TTS--S--T--T----T-T--EEE--SS---S-CHH
T ss_pred cccccccccccccccc--hhhhhc-------------CCCEEECCCCCCcccc--CccChh-hhhhcccCCCCCCccccc
Confidence 5677777777776642 22 344 5677777777777763 355666 777777777777777543
Q ss_pred hhcCCCCCCEEeccCCCCCCCCC-CcccCCCCCCEEEcCCCccccccc----cccCcCCCceee
Q psy10547 180 TLRHLKNLTLIDLSKNKIGKIPD-DSFSTLNNLVTLKLSDNNLTLYKN----SFRGLELNNNLT 238 (269)
Q Consensus 180 ~~~~l~~L~~L~l~~n~i~~i~~-~~~~~l~~L~~L~L~~n~l~~~p~----~~~~l~~L~~l~ 238 (269)
....+++|+.|++++|+|..+.. ..+..+++|+.|++.+|.++.-+. .+..+++|+.||
T Consensus 83 l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 83 LDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp HHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred hHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 23456777777777777765543 245566777777777777764433 244556666655
No 25
>KOG1259|consensus
Probab=99.31 E-value=4.8e-13 Score=108.74 Aligned_cols=196 Identities=24% Similarity=0.286 Sum_probs=141.0
Q ss_pred hhhhhhhccCCCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccc---cccccccc----
Q psy10547 64 FKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNI---NENTFNGI---- 136 (269)
Q Consensus 64 ~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l---~~~~~~~~---- 136 (269)
.++.+|-.++...+|+.+.++++.-..|-.-......|.++.+.+..+.... .+-.++.+... ..+...|.
T Consensus 202 ~~~~l~f~l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~--~l~pe~~~~D~~~~E~~t~~G~~~~~ 279 (490)
T KOG1259|consen 202 IPNRLSFNLNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVP--SLLPETILADPSGSEPSTSNGSALVS 279 (490)
T ss_pred cccccccchHHhhhhheeeeeccchhheeceeecCchhheeeeecccccccc--cccchhhhcCccCCCCCccCCceEEe
Confidence 3445555555666677788877765555444444445777777666544321 11111221111 01122222
Q ss_pred -----cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCC
Q psy10547 137 -----FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNL 211 (269)
Q Consensus 137 -----~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L 211 (269)
.|+.+|+++|.|+.+.. +..-++ +++.|++++|.+..+.. +..+++|..||+++|.++++.. +-..+-++
T Consensus 280 ~dTWq~LtelDLS~N~I~~iDE-SvKL~P-kir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~G-wh~KLGNI 354 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQIDE-SVKLAP-KLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVG-WHLKLGNI 354 (490)
T ss_pred cchHhhhhhccccccchhhhhh-hhhhcc-ceeEEeccccceeeehh--hhhcccceEeecccchhHhhhh-hHhhhcCE
Confidence 58899999999998864 555566 99999999999999864 8889999999999999998874 55677899
Q ss_pred CEEEcCCCccccccccccCcCCCceeeeccCcccccc--------cccceeecCCCCCCCCCCC
Q psy10547 212 VTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFRGLE--------LSLKNLNLKNTKLKSVTPY 267 (269)
Q Consensus 212 ~~L~L~~n~l~~~p~~~~~l~~L~~l~l~~n~~~~l~--------~~L~~L~l~~n~l~~~p~~ 267 (269)
+.|.|+.|.++.+. .++.+.+|..||+++|++..+. +-|+++.|.+|++..+|.+
T Consensus 355 KtL~La~N~iE~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 355 KTLKLAQNKIETLS-GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred eeeehhhhhHhhhh-hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 99999999998765 5788999999999999887532 3789999999999988763
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.30 E-value=1.7e-12 Score=100.01 Aligned_cols=116 Identities=28% Similarity=0.360 Sum_probs=49.7
Q ss_pred cccEEEcCCCCCCccChhHHh-hccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEE
Q psy10547 137 FIKNLQLSHCRINSITPNAFR-HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~-~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~ 215 (269)
.++.|+|++|.|+.+.. +. .+. +++.|++++|.++.+. .+..++.|+.|++++|.|+++.+.....+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~Ie~--L~~~l~-~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTIEN--LGATLD-KLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp ----------------S----TT-T-T--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccccc--hhhhhc-CCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 57889999999998743 44 456 8999999999999986 388899999999999999999753334688999999
Q ss_pred cCCCcccccc--ccccCcCCCceeeeccCcccccc----------cccceeecC
Q psy10547 216 LSDNNLTLYK--NSFRGLELNNNLTLYKNSFRGLE----------LSLKNLNLK 257 (269)
Q Consensus 216 L~~n~l~~~p--~~~~~l~~L~~l~l~~n~~~~l~----------~~L~~L~l~ 257 (269)
+++|+|..+. ..+..+++|+.|++.+|++...+ ++|+.||-.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 9999998654 36778899999999999988632 478887753
No 27
>KOG0532|consensus
Probab=99.28 E-value=1.5e-13 Score=119.99 Aligned_cols=171 Identities=23% Similarity=0.351 Sum_probs=145.8
Q ss_pred cEEEecCCCccccCcCCCCCCc---ccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhH
Q psy10547 79 DLLYINNSAIRNINENTFNGIF---IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNA 155 (269)
Q Consensus 79 ~~l~l~~~~i~~l~~~~~~~~~---L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~ 155 (269)
-.|.|++..+..+|...+. +. -...+++.|++..+ |..+..+. .|+.+.+..|.+..+ |.+
T Consensus 53 g~l~Ls~rrlk~fpr~a~~-~~ltdt~~aDlsrNR~~el-p~~~~~f~-------------~Le~liLy~n~~r~i-p~~ 116 (722)
T KOG0532|consen 53 GRLLLSGRRLKEFPRGAAS-YDLTDTVFADLSRNRFSEL-PEEACAFV-------------SLESLILYHNCIRTI-PEA 116 (722)
T ss_pred cccccccchhhcCCCcccc-ccccchhhhhccccccccC-chHHHHHH-------------HHHHHHHHhccceec-chh
Confidence 4688888888999888877 43 56789999999888 44555566 677889999998877 457
Q ss_pred HhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCc
Q psy10547 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNN 235 (269)
Q Consensus 156 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~ 235 (269)
+..+. .|.+++++.|.++.++.. +..++ |+.|.+++|+++.+|++ +.....|..|+.+.|.+..+|..++++.+|+
T Consensus 117 i~~L~-~lt~l~ls~NqlS~lp~~-lC~lp-Lkvli~sNNkl~~lp~~-ig~~~tl~~ld~s~nei~slpsql~~l~slr 192 (722)
T KOG0532|consen 117 ICNLE-ALTFLDLSSNQLSHLPDG-LCDLP-LKVLIVSNNKLTSLPEE-IGLLPTLAHLDVSKNEIQSLPSQLGYLTSLR 192 (722)
T ss_pred hhhhh-HHHHhhhccchhhcCChh-hhcCc-ceeEEEecCccccCCcc-cccchhHHHhhhhhhhhhhchHHhhhHHHHH
Confidence 78888 899999999999999876 55555 89999999999999984 6788899999999999999999999999999
Q ss_pred eeeeccCccccccc-----ccceeecCCCCCCCCCCCCC
Q psy10547 236 NLTLYKNSFRGLEL-----SLKNLNLKNTKLKSVTPYWR 269 (269)
Q Consensus 236 ~l~l~~n~~~~l~~-----~L~~L~l~~n~l~~~p~~~~ 269 (269)
.+.++.|++..+|. .|..||+|+|++..+|-+||
T Consensus 193 ~l~vrRn~l~~lp~El~~LpLi~lDfScNkis~iPv~fr 231 (722)
T KOG0532|consen 193 DLNVRRNHLEDLPEELCSLPLIRLDFSCNKISYLPVDFR 231 (722)
T ss_pred HHHHhhhhhhhCCHHHhCCceeeeecccCceeecchhhh
Confidence 99999999988773 48899999999999998874
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.28 E-value=4.8e-12 Score=111.25 Aligned_cols=174 Identities=30% Similarity=0.406 Sum_probs=142.6
Q ss_pred CcccEEEecCCCccccCcCCCCCC-cccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChh
Q psy10547 76 VPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPN 154 (269)
Q Consensus 76 ~~l~~l~l~~~~i~~l~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~ 154 (269)
..++.+.+.++.+.+++....... +|+.|++++|++..+. .....++ .|+.|++++|++..+++.
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~-------------~L~~L~l~~N~l~~l~~~ 181 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNLP-------------NLKNLDLSFNDLSDLPKL 181 (394)
T ss_pred cceeEEecCCcccccCccccccchhhcccccccccchhhhh-hhhhccc-------------cccccccCCchhhhhhhh
Confidence 447889999999999988887764 7899999999988873 3456677 788899999999998663
Q ss_pred HHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCC
Q psy10547 155 AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELN 234 (269)
Q Consensus 155 ~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L 234 (269)
..... +++.|++++|++..++.. ......|+.+.+++|.+..++. .+..+.++..+.+.+|++..++..+..++.+
T Consensus 182 -~~~~~-~L~~L~ls~N~i~~l~~~-~~~~~~L~~l~~~~N~~~~~~~-~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l 257 (394)
T COG4886 182 -LSNLS-NLNNLDLSGNKISDLPPE-IELLSALEELDLSNNSIIELLS-SLSNLKNLSGLELSNNKLEDLPESIGNLSNL 257 (394)
T ss_pred -hhhhh-hhhheeccCCccccCchh-hhhhhhhhhhhhcCCcceecch-hhhhcccccccccCCceeeeccchhcccccc
Confidence 22556 899999999999999864 3455669999999997655554 5778888999999999998888889999999
Q ss_pred ceeeeccCcccccc-----cccceeecCCCCCCCCCCC
Q psy10547 235 NNLTLYKNSFRGLE-----LSLKNLNLKNTKLKSVTPY 267 (269)
Q Consensus 235 ~~l~l~~n~~~~l~-----~~L~~L~l~~n~l~~~p~~ 267 (269)
+.+++++|.++.++ .+++.|++++|.+..+++.
T Consensus 258 ~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 258 ETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred ceeccccccccccccccccCccCEEeccCccccccchh
Confidence 99999999998875 5899999999998876654
No 29
>KOG1259|consensus
Probab=99.16 E-value=4.8e-12 Score=102.99 Aligned_cols=128 Identities=27% Similarity=0.350 Sum_probs=109.2
Q ss_pred ccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhh
Q psy10547 101 IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180 (269)
Q Consensus 101 L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 180 (269)
|+.+|+++|.|+.+.. ...-++ .++.|++++|.|..+.. +..++ +|++||+++|.++.+. ++
T Consensus 286 LtelDLS~N~I~~iDE-SvKL~P-------------kir~L~lS~N~i~~v~n--La~L~-~L~~LDLS~N~Ls~~~-Gw 347 (490)
T KOG1259|consen 286 LTELDLSGNLITQIDE-SVKLAP-------------KLRRLILSQNRIRTVQN--LAELP-QLQLLDLSGNLLAECV-GW 347 (490)
T ss_pred hhhccccccchhhhhh-hhhhcc-------------ceeEEeccccceeeehh--hhhcc-cceEeecccchhHhhh-hh
Confidence 8889999999998843 455566 78899999999998854 77888 9999999999999886 45
Q ss_pred hcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcccccc--ccccCcCCCceeeeccCcccccc
Q psy10547 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK--NSFRGLELNNNLTLYKNSFRGLE 248 (269)
Q Consensus 181 ~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p--~~~~~l~~L~~l~l~~n~~~~l~ 248 (269)
-..+.++++|.+++|.|..+.. +..+.+|..|++++|+|..+. ..+++++-|+++.+.+|.+..++
T Consensus 348 h~KLGNIKtL~La~N~iE~LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 348 HLKLGNIKTLKLAQNKIETLSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred HhhhcCEeeeehhhhhHhhhhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 5678899999999999987763 667788999999999998654 47999999999999999998865
No 30
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.15 E-value=2.1e-11 Score=77.75 Aligned_cols=60 Identities=45% Similarity=0.730 Sum_probs=36.2
Q ss_pred cccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcc
Q psy10547 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l 221 (269)
+|++|++++|+++.++++.|..+++|++|++++|.++.+++++|.++++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455666666666666655566666666666666666666655666666666666665543
No 31
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.03 E-value=1.7e-10 Score=73.51 Aligned_cols=60 Identities=33% Similarity=0.666 Sum_probs=44.4
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCC
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i 197 (269)
+|++|++++|.++.+++..|.+++ +|++|++++|+++.++++.|..+++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~-~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLP-NLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGT-TESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCC-CCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 566777777777777777777777 777777777777777777777777777777777754
No 32
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.96 E-value=7.2e-10 Score=97.49 Aligned_cols=168 Identities=32% Similarity=0.445 Sum_probs=127.0
Q ss_pred EEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCC-cccccccccccccccccEEEcCCCCCCccChhHHhhc
Q psy10547 81 LYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL-DAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL 159 (269)
Q Consensus 81 l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l 159 (269)
+....+.+..-.........++.|++.+|.++.+.+.. ..+ . +++.|++++|.+..+. ..+..+
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~-~~~~~-------------nL~~L~l~~N~i~~l~-~~~~~l 162 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLI-GLLKS-------------NLKELDLSDNKIESLP-SPLRNL 162 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCcccccCcccc-ccchh-------------hcccccccccchhhhh-hhhhcc
Confidence 55555554332333323334788888888888886532 222 2 5778999999998874 356677
Q ss_pred cccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCceeee
Q psy10547 160 EFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTL 239 (269)
Q Consensus 160 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~~l~l 239 (269)
+ +|+.|++++|++..+++. ....+.|+.|++++|+++.++. .......|+.+.+++|.+...+..+..+..+..+.+
T Consensus 163 ~-~L~~L~l~~N~l~~l~~~-~~~~~~L~~L~ls~N~i~~l~~-~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l 239 (394)
T COG4886 163 P-NLKNLDLSFNDLSDLPKL-LSNLSNLNNLDLSGNKISDLPP-EIELLSALEELDLSNNSIIELLSSLSNLKNLSGLEL 239 (394)
T ss_pred c-cccccccCCchhhhhhhh-hhhhhhhhheeccCCccccCch-hhhhhhhhhhhhhcCCcceecchhhhhccccccccc
Confidence 7 999999999999999864 3367899999999999999987 334556699999999977777778888999999988
Q ss_pred ccCccccc------ccccceeecCCCCCCCCCC
Q psy10547 240 YKNSFRGL------ELSLKNLNLKNTKLKSVTP 266 (269)
Q Consensus 240 ~~n~~~~l------~~~L~~L~l~~n~l~~~p~ 266 (269)
..|++..+ +.+++.|++++|+++.++.
T Consensus 240 ~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~ 272 (394)
T COG4886 240 SNNKLEDLPESIGNLSNLETLDLSNNQISSISS 272 (394)
T ss_pred CCceeeeccchhccccccceecccccccccccc
Confidence 88877552 2579999999999999875
No 33
>KOG1909|consensus
Probab=98.95 E-value=1.2e-10 Score=96.46 Aligned_cols=202 Identities=19% Similarity=0.232 Sum_probs=145.9
Q ss_pred CCCCchhhhhhhhccCCCCcccEEEecCCCccccCcCCC-----CCCcccEEEecCCCCcccCcccccCCccccccc--c
Q psy10547 58 LTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF-----NGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN--E 130 (269)
Q Consensus 58 ~~~~~~~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~~-----~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~--~ 130 (269)
...+|+....+...+-+...|++++|++|-++.-....| +...|++|.+.+|.+.......+++ .|..+. .
T Consensus 74 ~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~~~k 151 (382)
T KOG1909|consen 74 KDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELAVNK 151 (382)
T ss_pred HHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHHHHh
Confidence 446788888888888788889999999998774333222 2334999999999988665544332 011111 0
Q ss_pred cccccccccEEEcCCCCCCccCh----hHHhhccccccEEEccCCCCCc----cChhhhcCCCCCCEEeccCCCCCCCC-
Q psy10547 131 NTFNGIFIKNLQLSHCRINSITP----NAFRHLEFTLKHLNLQENDLEQ----VPVETLRHLKNLTLIDLSKNKIGKIP- 201 (269)
Q Consensus 131 ~~~~~~~L~~L~l~~n~i~~~~~----~~~~~l~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~i~~i~- 201 (269)
-.-+.+.|++++..+|.+..-+. ..|+..+ .|+.+.+..|.|.. .....|.++++|+.||+++|-++.-.
T Consensus 152 k~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~-~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs 230 (382)
T KOG1909|consen 152 KAASKPKLRVFICGRNRLENGGATALAEAFQSHP-TLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS 230 (382)
T ss_pred ccCCCcceEEEEeeccccccccHHHHHHHHHhcc-ccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH
Confidence 01112279999999999987654 3456666 89999999998863 34467889999999999999986433
Q ss_pred ---CCcccCCCCCCEEEcCCCcccc-----cccccc-CcCCCceeeeccCccccc-----------ccccceeecCCCCC
Q psy10547 202 ---DDSFSTLNNLVTLKLSDNNLTL-----YKNSFR-GLELNNNLTLYKNSFRGL-----------ELSLKNLNLKNTKL 261 (269)
Q Consensus 202 ---~~~~~~l~~L~~L~L~~n~l~~-----~p~~~~-~l~~L~~l~l~~n~~~~l-----------~~~L~~L~l~~n~l 261 (269)
...++.|++|+.+++++|.++. +-.++. ..++|+.+.+.+|.++.- .+.|..|+|++|++
T Consensus 231 ~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 231 VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 2467788999999999999972 223333 368899999999988751 14899999999998
Q ss_pred C
Q psy10547 262 K 262 (269)
Q Consensus 262 ~ 262 (269)
.
T Consensus 311 ~ 311 (382)
T KOG1909|consen 311 G 311 (382)
T ss_pred c
Confidence 3
No 34
>PLN03150 hypothetical protein; Provisional
Probab=98.95 E-value=2.9e-09 Score=98.62 Aligned_cols=83 Identities=27% Similarity=0.297 Sum_probs=46.4
Q ss_pred ccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccc-cccccccCcCCCceeeecc
Q psy10547 163 LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYK 241 (269)
Q Consensus 163 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~p~~~~~l~~L~~l~l~~ 241 (269)
++.|+|++|.+.+..+..+..+++|+.|++++|.+.+..+..+..+++|+.|+|++|+++ .+|+.++.+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 455555555555554555555556666666665554333334555555666666666555 3555555555666666665
Q ss_pred Cccc
Q psy10547 242 NSFR 245 (269)
Q Consensus 242 n~~~ 245 (269)
|.+.
T Consensus 500 N~l~ 503 (623)
T PLN03150 500 NSLS 503 (623)
T ss_pred Cccc
Confidence 5555
No 35
>PLN03150 hypothetical protein; Provisional
Probab=98.92 E-value=3.7e-09 Score=97.89 Aligned_cols=84 Identities=27% Similarity=0.414 Sum_probs=36.1
Q ss_pred ccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcC
Q psy10547 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217 (269)
Q Consensus 138 L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~ 217 (269)
++.|+|++|.+.+..|..+..+. +|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~-~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLR-HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCC-CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 33444444444444444444444 44444444444443333334444444444444444433222334444444444444
Q ss_pred CCccc
Q psy10547 218 DNNLT 222 (269)
Q Consensus 218 ~n~l~ 222 (269)
+|.++
T Consensus 499 ~N~l~ 503 (623)
T PLN03150 499 GNSLS 503 (623)
T ss_pred CCccc
Confidence 44443
No 36
>KOG3207|consensus
Probab=98.88 E-value=4.3e-10 Score=95.74 Aligned_cols=188 Identities=20% Similarity=0.268 Sum_probs=108.1
Q ss_pred CCCcccEEEecCCCccccCcC--CCCCCcccEEEecCCCCcccCcc--cccCCccccccc--ccccccc----------c
Q psy10547 74 TKVPLDLLYINNSAIRNINEN--TFNGIFIKNLQLSHCRINSITPN--AFRHLDAIRNIN--ENTFNGI----------F 137 (269)
Q Consensus 74 ~~~~l~~l~l~~~~i~~l~~~--~~~~~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~l~--~~~~~~~----------~ 137 (269)
+...|+...+.+..+...+.+ .-....++.|+++.|-+..+.+- ....+++|+.|+ .|.+... .
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 334466777777777766643 11223378888888876654332 235566555443 2222211 5
Q ss_pred ccEEEcCCCCCCccChh-HHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCC-CcccCCCCCCEEE
Q psy10547 138 IKNLQLSHCRINSITPN-AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD-DSFSTLNNLVTLK 215 (269)
Q Consensus 138 L~~L~l~~n~i~~~~~~-~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~-~~~~~l~~L~~L~ 215 (269)
++.|.++.+.++.-.-. ....++ +++.|++..|....+.......++.|+.|||++|.+...+. .....++.|+.|.
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fP-sl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFP-SLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCC-cHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 66777777766632211 122344 77777777775333333334556677777777777655542 1345667777777
Q ss_pred cCCCccccc--ccc-----ccCcCCCceeeeccCcccccc--------cccceeecCCCCCC
Q psy10547 216 LSDNNLTLY--KNS-----FRGLELNNNLTLYKNSFRGLE--------LSLKNLNLKNTKLK 262 (269)
Q Consensus 216 L~~n~l~~~--p~~-----~~~l~~L~~l~l~~n~~~~l~--------~~L~~L~l~~n~l~ 262 (269)
++.+.++++ |+. ...+.+|+.|++..|++.+.+ .+++.|.+..|.+.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 777777743 332 234567777777777764422 35566666666654
No 37
>KOG0531|consensus
Probab=98.76 E-value=7.9e-10 Score=97.77 Aligned_cols=128 Identities=29% Similarity=0.355 Sum_probs=83.6
Q ss_pred CcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhH
Q psy10547 76 VPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNA 155 (269)
Q Consensus 76 ~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~ 155 (269)
..++.++++.|.+..+....-....++.|++.+|+|.++... +..++ +|++|++++|.|+.+.+
T Consensus 72 ~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~~-------------~L~~L~ls~N~I~~i~~-- 135 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL-LSSLV-------------NLQVLDLSFNKITKLEG-- 135 (414)
T ss_pred HhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccc-hhhhh-------------cchheeccccccccccc--
Confidence 334556666666666433333334477778888877776542 44555 67777777777777743
Q ss_pred HhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCC-CcccCCCCCCEEEcCCCcccc
Q psy10547 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD-DSFSTLNNLVTLKLSDNNLTL 223 (269)
Q Consensus 156 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~-~~~~~l~~L~~L~L~~n~l~~ 223 (269)
+..+. .|+.|++++|.++.+.. +..+..|+.+++++|.+..+.. . ...+.+++.+.+..|.+..
T Consensus 136 l~~l~-~L~~L~l~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 136 LSTLT-LLKELNLSGNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred hhhcc-chhhheeccCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 45566 67777777777777753 5557777777777777777765 1 3566677777777776653
No 38
>KOG0531|consensus
Probab=98.74 E-value=1.7e-09 Score=95.73 Aligned_cols=132 Identities=29% Similarity=0.412 Sum_probs=88.4
Q ss_pred hccCCCCcccEEEecCCCccccCcCCCCCCcccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCC
Q psy10547 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRIN 149 (269)
Q Consensus 70 ~~~~~~~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~ 149 (269)
..+.....++.+++.+|.|..+....-...+|++|++++|.|+.+.+ +..++ .|+.|++++|.|+
T Consensus 89 ~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~-------------~L~~L~l~~N~i~ 153 (414)
T KOG0531|consen 89 NHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLT-------------LLKELNLSGNLIS 153 (414)
T ss_pred cccccccceeeeeccccchhhcccchhhhhcchheeccccccccccc--hhhcc-------------chhhheeccCcch
Confidence 34667788899999999999887754445558999999999998764 44555 5667777888777
Q ss_pred ccChhHHhhccccccEEEccCCCCCccCh-hhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccc
Q psy10547 150 SITPNAFRHLEFTLKHLNLQENDLEQVPV-ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222 (269)
Q Consensus 150 ~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 222 (269)
.+. .+..+. +++.+++++|.+..+.. . ...+..++.+++.+|.+..+.. +..+..+..+++..|.++
T Consensus 154 ~~~--~~~~l~-~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 154 DIS--GLESLK-SLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--LDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred hcc--CCccch-hhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--hHHHHHHHHhhcccccce
Confidence 763 344466 77777788777777764 2 3556677777777777665542 223333333344444444
No 39
>KOG1859|consensus
Probab=98.69 E-value=1.3e-09 Score=98.33 Aligned_cols=121 Identities=28% Similarity=0.322 Sum_probs=100.1
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEc
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L 216 (269)
.|.+.+.++|.+.... .++.-++ .++.|+|++|+++.+. .++.++.|++||++.|.++.+|.-..... +|..|.+
T Consensus 165 ~L~~a~fsyN~L~~mD-~SLqll~-ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMD-ESLQLLP-ALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHHhHH-HHHHHHH-HhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeee
Confidence 6888899999988764 4676677 8999999999999986 58999999999999999999986333333 5999999
Q ss_pred CCCccccccccccCcCCCceeeeccCcccccc--------cccceeecCCCCCCC
Q psy10547 217 SDNNLTLYKNSFRGLELNNNLTLYKNSFRGLE--------LSLKNLNLKNTKLKS 263 (269)
Q Consensus 217 ~~n~l~~~p~~~~~l~~L~~l~l~~n~~~~l~--------~~L~~L~l~~n~l~~ 263 (269)
.+|.++.+- .+.++.+|+.||+++|-+.+-. ..|+.|+|.+|++--
T Consensus 240 rnN~l~tL~-gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 240 RNNALTTLR-GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred cccHHHhhh-hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 999998765 5778999999999999766521 478999999998754
No 40
>KOG3207|consensus
Probab=98.68 E-value=8.8e-09 Score=87.92 Aligned_cols=156 Identities=22% Similarity=0.303 Sum_probs=106.4
Q ss_pred cccEEEecCCCccccCcCCCCCC-c-ccEEEecCCCCcccC-cccccCCcccccccccccccccccEEEcCCCCCCccCh
Q psy10547 77 PLDLLYINNSAIRNINENTFNGI-F-IKNLQLSHCRINSIT-PNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITP 153 (269)
Q Consensus 77 ~l~~l~l~~~~i~~l~~~~~~~~-~-L~~L~l~~n~l~~~~-~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~ 153 (269)
+|+.|+++.|.+.....+..... . +++|.++.|.++.-. ......++ ++..|++.+|....+..
T Consensus 173 ~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fP-------------sl~~L~L~~N~~~~~~~ 239 (505)
T KOG3207|consen 173 SLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFP-------------SLEVLYLEANEIILIKA 239 (505)
T ss_pred cchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCC-------------cHHHhhhhcccccceec
Confidence 35667777776655444443332 2 677777777666321 11233445 78889999996444444
Q ss_pred hHHhhccccccEEEccCCCCCccCh-hhhcCCCCCCEEeccCCCCCCCCCCcc------cCCCCCCEEEcCCCccccccc
Q psy10547 154 NAFRHLEFTLKHLNLQENDLEQVPV-ETLRHLKNLTLIDLSKNKIGKIPDDSF------STLNNLVTLKLSDNNLTLYKN 226 (269)
Q Consensus 154 ~~~~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~i~~~~~------~~l~~L~~L~L~~n~l~~~p~ 226 (269)
....-+. .|++|+|++|++...+. .....++.|+.|+++.+.+.++..-.. ...++|+.|++..|++..++.
T Consensus 240 ~~~~i~~-~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~s 318 (505)
T KOG3207|consen 240 TSTKILQ-TLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRS 318 (505)
T ss_pred chhhhhh-HHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccc
Confidence 4445555 89999999999887763 235678999999999999976642222 356899999999999987653
Q ss_pred --cccCcCCCceeeeccCcccc
Q psy10547 227 --SFRGLELNNNLTLYKNSFRG 246 (269)
Q Consensus 227 --~~~~l~~L~~l~l~~n~~~~ 246 (269)
.+..+.+|+++.+..|.+..
T Consensus 319 l~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 319 LNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred cchhhccchhhhhhcccccccc
Confidence 56677788888877776653
No 41
>KOG1909|consensus
Probab=98.67 E-value=8.8e-09 Score=85.57 Aligned_cols=191 Identities=17% Similarity=0.199 Sum_probs=131.1
Q ss_pred hhhhhhhccCCCCcccEEEecCCCccccCcCC----------CCCC-cccEEEecCCCCcccCcccccCCcccccccccc
Q psy10547 64 FKATLNKHVNTKVPLDLLYINNSAIRNINENT----------FNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENT 132 (269)
Q Consensus 64 ~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~----------~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~ 132 (269)
....+.+.+....+|+..++++-..+.+-..+ +.+. .|++|+||.|-+..-.+..|..+-+=.+
T Consensus 46 Aa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~----- 120 (382)
T KOG1909|consen 46 AARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCT----- 120 (382)
T ss_pred HHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhcc-----
Confidence 34444445555556677777665433222111 1112 4888888888877655554443321111
Q ss_pred cccccccEEEcCCCCCCccChhHHhh------------ccccccEEEccCCCCCccC----hhhhcCCCCCCEEeccCCC
Q psy10547 133 FNGIFIKNLQLSHCRINSITPNAFRH------------LEFTLKHLNLQENDLEQVP----VETLRHLKNLTLIDLSKNK 196 (269)
Q Consensus 133 ~~~~~L~~L~l~~n~i~~~~~~~~~~------------l~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~ 196 (269)
.|++|.|.+|.+.......+++ -++.|+.+...+|++..-. ...|+..+.|+.+.++.|.
T Consensus 121 ----~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~ 196 (382)
T KOG1909|consen 121 ----DLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNG 196 (382)
T ss_pred ----CHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEeccc
Confidence 7889999999887655444322 1247999999999987544 3467778999999999998
Q ss_pred CCCCC----CCcccCCCCCCEEEcCCCccc-----cccccccCcCCCceeeeccCcccc------------cccccceee
Q psy10547 197 IGKIP----DDSFSTLNNLVTLKLSDNNLT-----LYKNSFRGLELNNNLTLYKNSFRG------------LELSLKNLN 255 (269)
Q Consensus 197 i~~i~----~~~~~~l~~L~~L~L~~n~l~-----~~p~~~~~l~~L~~l~l~~n~~~~------------l~~~L~~L~ 255 (269)
|..-. ...+.++++|+.|+|++|.++ .+...++.++.|+.++++++.+.. ..+.|++|.
T Consensus 197 I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~ 276 (382)
T KOG1909|consen 197 IRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLE 276 (382)
T ss_pred ccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceec
Confidence 85322 235778899999999999997 356788899999999999987764 114899999
Q ss_pred cCCCCCCC
Q psy10547 256 LKNTKLKS 263 (269)
Q Consensus 256 l~~n~l~~ 263 (269)
+.+|.|+.
T Consensus 277 l~gNeIt~ 284 (382)
T KOG1909|consen 277 LAGNEITR 284 (382)
T ss_pred cCcchhHH
Confidence 99998864
No 42
>KOG1644|consensus
Probab=98.48 E-value=2.4e-07 Score=71.69 Aligned_cols=122 Identities=24% Similarity=0.320 Sum_probs=75.7
Q ss_pred cEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhh
Q psy10547 102 KNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181 (269)
Q Consensus 102 ~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~ 181 (269)
+.+++.+.++..+.. +..... +...+||++|.+..+ +.|..+. .|++|.+++|+|+.+.+..-
T Consensus 22 ~e~~LR~lkip~ien-----lg~~~d---------~~d~iDLtdNdl~~l--~~lp~l~-rL~tLll~nNrIt~I~p~L~ 84 (233)
T KOG1644|consen 22 RELDLRGLKIPVIEN-----LGATLD---------QFDAIDLTDNDLRKL--DNLPHLP-RLHTLLLNNNRITRIDPDLD 84 (233)
T ss_pred cccccccccccchhh-----cccccc---------ccceecccccchhhc--ccCCCcc-ccceEEecCCcceeeccchh
Confidence 666777766665533 221111 566777777777665 3456666 77777777777777776655
Q ss_pred cCCCCCCEEeccCCCCCCCCC-CcccCCCCCCEEEcCCCccccccc----cccCcCCCceeeec
Q psy10547 182 RHLKNLTLIDLSKNKIGKIPD-DSFSTLNNLVTLKLSDNNLTLYKN----SFRGLELNNNLTLY 240 (269)
Q Consensus 182 ~~l~~L~~L~l~~n~i~~i~~-~~~~~l~~L~~L~L~~n~l~~~p~----~~~~l~~L~~l~l~ 240 (269)
.-+++|..|.+.+|.|..+.+ .-+..+++|+.|.+-+|.++.-.. -+..+++|+.||..
T Consensus 85 ~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~ 148 (233)
T KOG1644|consen 85 TFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQ 148 (233)
T ss_pred hhccccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehh
Confidence 556677777777777755432 124556677777777777764432 24455666666544
No 43
>KOG4579|consensus
Probab=98.42 E-value=2e-08 Score=72.96 Aligned_cols=85 Identities=20% Similarity=0.317 Sum_probs=42.5
Q ss_pred ccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCceeeeccC
Q psy10547 163 LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242 (269)
Q Consensus 163 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~~l~l~~n 242 (269)
|...++++|.+..+++.--...+.+++|++++|.|..+|.+ +..++.|+.|+++.|.+...|.-+..+.++..|+...|
T Consensus 55 l~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds~~n 133 (177)
T KOG4579|consen 55 LTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDSPEN 133 (177)
T ss_pred EEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhcccccCccccchHHHHHHHhHHHhcCCCC
Confidence 33445555555555543222333455555555555555543 55555555555555555554544444555555555555
Q ss_pred cccccc
Q psy10547 243 SFRGLE 248 (269)
Q Consensus 243 ~~~~l~ 248 (269)
+...++
T Consensus 134 a~~eid 139 (177)
T KOG4579|consen 134 ARAEID 139 (177)
T ss_pred ccccCc
Confidence 544443
No 44
>KOG1859|consensus
Probab=98.40 E-value=5.1e-09 Score=94.54 Aligned_cols=104 Identities=30% Similarity=0.368 Sum_probs=85.2
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEc
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L 216 (269)
.++.|+|++|+++.+. .+..++ .|++|||++|.+..++.-....+. |..|.+.+|.++.+.. +.++.+|+.||+
T Consensus 188 ale~LnLshNk~~~v~--~Lr~l~-~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~g--ie~LksL~~LDl 261 (1096)
T KOG1859|consen 188 ALESLNLSHNKFTKVD--NLRRLP-KLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLRG--IENLKSLYGLDL 261 (1096)
T ss_pred HhhhhccchhhhhhhH--HHHhcc-cccccccccchhccccccchhhhh-heeeeecccHHHhhhh--HHhhhhhhccch
Confidence 6888999999999874 788888 999999999999988753333434 8999999999988874 788999999999
Q ss_pred CCCccccccc--cccCcCCCceeeeccCcccc
Q psy10547 217 SDNNLTLYKN--SFRGLELNNNLTLYKNSFRG 246 (269)
Q Consensus 217 ~~n~l~~~p~--~~~~l~~L~~l~l~~n~~~~ 246 (269)
++|-+.+..+ -+..+..|+.|++.+|.+.-
T Consensus 262 syNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 262 SYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 9998876543 46677888999999997754
No 45
>KOG4579|consensus
Probab=98.37 E-value=4.6e-08 Score=71.15 Aligned_cols=104 Identities=21% Similarity=0.244 Sum_probs=85.5
Q ss_pred cccEEEccCCCCCccChh--hhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCCCceeee
Q psy10547 162 TLKHLNLQENDLEQVPVE--TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTL 239 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~L~~l~l 239 (269)
.+..++|+++.+-.+... .+.....|+..++++|.+.+.|+..-...+.++++++++|.|+.+|..+-.++.|+.+++
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNL 107 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhccc
Confidence 577888888887766542 234556788899999999999986545556899999999999999999999999999999
Q ss_pred ccCcccccc------cccceeecCCCCCCCCC
Q psy10547 240 YKNSFRGLE------LSLKNLNLKNTKLKSVT 265 (269)
Q Consensus 240 ~~n~~~~l~------~~L~~L~l~~n~l~~~p 265 (269)
+.|.|.-.| .++-.||..+|.+..+|
T Consensus 108 ~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 108 RFNPLNAEPRVIAPLIKLDMLDSPENARAEID 139 (177)
T ss_pred ccCccccchHHHHHHHhHHHhcCCCCccccCc
Confidence 999988755 35667888899888776
No 46
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.34 E-value=1.5e-06 Score=63.76 Aligned_cols=109 Identities=26% Similarity=0.451 Sum_probs=43.0
Q ss_pred cCcCCCCCC-cccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHhhccccccEEEcc
Q psy10547 91 INENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQ 169 (269)
Q Consensus 91 l~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~ 169 (269)
|+..+|... .|+.+.+.. .+..+...+|.++. +++.+.+..+ +..+...+|.... +++.+.+.
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~-------------~l~~i~~~~~-~~~i~~~~F~~~~-~l~~i~~~ 66 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIKKIGENAFSNCT-------------SLKSINFPNN-LTSIGDNAFSNCK-SLESITFP 66 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T--EE-TTTTTT-T-------------T-SEEEESST-TSCE-TTTTTT-T-T-EEEEET
T ss_pred ECHHHHhCCCCCCEEEECC-CeeEeChhhccccc-------------cccccccccc-ccccceeeeeccc-cccccccc
Confidence 344445444 255555542 34455555555554 4444555443 4444444555544 45555554
Q ss_pred CCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCC
Q psy10547 170 ENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSD 218 (269)
Q Consensus 170 ~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~ 218 (269)
+ .+..+....|..+++++.+++..+ +..++...|.+. +|+.+.+..
T Consensus 67 ~-~~~~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 67 N-NLKSIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp S-TT-EE-TTTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT
T ss_pred c-cccccccccccccccccccccCcc-ccEEchhhhcCC-CceEEEECC
Confidence 3 444444444555555555555443 444444445444 455555443
No 47
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.34 E-value=6.8e-07 Score=52.48 Aligned_cols=37 Identities=46% Similarity=0.636 Sum_probs=16.5
Q ss_pred CCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCcccc
Q psy10547 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223 (269)
Q Consensus 186 ~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~ 223 (269)
+|++|++++|+|+.+++ .++++++|+.|++++|+++.
T Consensus 2 ~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp T-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSB
T ss_pred cceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCC
Confidence 34444555554444443 24444444555544444443
No 48
>KOG1644|consensus
Probab=98.32 E-value=8.8e-07 Score=68.62 Aligned_cols=124 Identities=21% Similarity=0.268 Sum_probs=85.1
Q ss_pred ccEEEecCCCccccCcCCCCCC-cccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHH
Q psy10547 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAF 156 (269)
Q Consensus 78 l~~l~l~~~~i~~l~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~ 156 (269)
-+.+++++..+..+.. ..... ....+|+++|.+..+. .|..++ .|.+|.+++|.|+.+.|..-
T Consensus 21 e~e~~LR~lkip~ien-lg~~~d~~d~iDLtdNdl~~l~--~lp~l~-------------rL~tLll~nNrIt~I~p~L~ 84 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIEN-LGATLDQFDAIDLTDNDLRKLD--NLPHLP-------------RLHTLLLNNNRITRIDPDLD 84 (233)
T ss_pred ccccccccccccchhh-ccccccccceecccccchhhcc--cCCCcc-------------ccceEEecCCcceeeccchh
Confidence 3567777776665554 11122 2677888888887653 355666 78888888888888888655
Q ss_pred hhccccccEEEccCCCCCccCh-hhhcCCCCCCEEeccCCCCCCCCC---CcccCCCCCCEEEcCC
Q psy10547 157 RHLEFTLKHLNLQENDLEQVPV-ETLRHLKNLTLIDLSKNKIGKIPD---DSFSTLNNLVTLKLSD 218 (269)
Q Consensus 157 ~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~i~~---~~~~~l~~L~~L~L~~ 218 (269)
.-++ +++.|.+.+|.+..+.. ..+..++.|++|.+-+|.+++-.. -.+..+++|+.||.+.
T Consensus 85 ~~~p-~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 85 TFLP-NLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred hhcc-ccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 5555 78888888888876432 235677888888888888765432 2345678888888765
No 49
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.25 E-value=4.5e-06 Score=61.22 Aligned_cols=120 Identities=24% Similarity=0.447 Sum_probs=75.7
Q ss_pred CCCCcccEEEecCCCccccCcCCCCCC-cccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCcc
Q psy10547 73 NTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSI 151 (269)
Q Consensus 73 ~~~~~l~~l~l~~~~i~~l~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~ 151 (269)
.+...++.+.+.. .+..++...|... .++.+.+.++ +..+...+|.+++ +++.+.+.. .+..+
T Consensus 9 ~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~-------------~l~~i~~~~-~~~~i 72 (129)
T PF13306_consen 9 YNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCK-------------SLESITFPN-NLKSI 72 (129)
T ss_dssp TT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-T-------------T-EEEEETS-TT-EE
T ss_pred hCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeeccc-------------ccccccccc-ccccc
Confidence 3445688899885 6889999999998 5999999885 8899889999998 688888876 77777
Q ss_pred ChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCC
Q psy10547 152 TPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLV 212 (269)
Q Consensus 152 ~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~ 212 (269)
....|.... +++.+++..+ +..+....|... .++.+.+.+ .+..++..+|.+.++|+
T Consensus 73 ~~~~F~~~~-~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 73 GDNAFSNCT-NLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp -TTTTTT-T-TECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred ccccccccc-cccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 778888888 9999999875 788888889887 999999876 67888888898887764
No 50
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.24 E-value=1.1e-06 Score=51.61 Aligned_cols=38 Identities=37% Similarity=0.633 Sum_probs=17.1
Q ss_pred cccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCC
Q psy10547 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i 200 (269)
+|++|++++|+++.+++ .+..+++|+.|++++|+++++
T Consensus 2 ~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCC
Confidence 34455555555554443 244455555555555544433
No 51
>KOG4658|consensus
Probab=98.21 E-value=1.9e-06 Score=82.31 Aligned_cols=126 Identities=23% Similarity=0.307 Sum_probs=77.0
Q ss_pred cEEEecCCCccccCcCCCCCCcccEEEecCCC--CcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHH
Q psy10547 79 DLLYINNSAIRNINENTFNGIFIKNLQLSHCR--INSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAF 156 (269)
Q Consensus 79 ~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~--l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~ 156 (269)
+...+-++.+..++...-.. .+++|-+..|. +..+....|..++ .|++||+++|.--.-.|..+
T Consensus 526 rr~s~~~~~~~~~~~~~~~~-~L~tLll~~n~~~l~~is~~ff~~m~-------------~LrVLDLs~~~~l~~LP~~I 591 (889)
T KOG4658|consen 526 RRMSLMNNKIEHIAGSSENP-KLRTLLLQRNSDWLLEISGEFFRSLP-------------LLRVLDLSGNSSLSKLPSSI 591 (889)
T ss_pred eEEEEeccchhhccCCCCCC-ccceEEEeecchhhhhcCHHHHhhCc-------------ceEEEECCCCCccCcCChHH
Confidence 44455555555444433222 46677777765 5555555666677 66677777664444446667
Q ss_pred hhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCc
Q psy10547 157 RHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220 (269)
Q Consensus 157 ~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~ 220 (269)
+.+. +|++|+++++.+..+|.+ ++.+..|.+|++..+......++....+++|++|.+..-.
T Consensus 592 ~~Li-~LryL~L~~t~I~~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 592 GELV-HLRYLDLSDTGISHLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhhh-hhhcccccCCCccccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 7777 777777777777766643 6777777777777665433334555557777777765443
No 52
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.14 E-value=4.8e-07 Score=73.24 Aligned_cols=199 Identities=18% Similarity=0.164 Sum_probs=131.7
Q ss_pred CCchhhhhhhhccCCCCcccEEEecCCCccccCcCC----CCC-CcccEEEecCCCCcccCccccc----CCcccccccc
Q psy10547 60 NYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENT----FNG-IFIKNLQLSHCRINSITPNAFR----HLDAIRNINE 130 (269)
Q Consensus 60 ~~~~~~~~l~~~~~~~~~l~~l~l~~~~i~~l~~~~----~~~-~~L~~L~l~~n~l~~~~~~~~~----~l~~L~~l~~ 130 (269)
.+++-...+.+.+-+...++++++++|.++.--+.. .+. ..|.+|.+++|.+..+....++ .+...+
T Consensus 76 e~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nK---- 151 (388)
T COG5238 76 ELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNK---- 151 (388)
T ss_pred HHHHHHHHHHHHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHh----
Confidence 456666666777778888999999999877433222 222 2399999999998876554332 222111
Q ss_pred cccccccccEEEcCCCCCCccChhH----HhhccccccEEEccCCCCCcc-----ChhhhcCCCCCCEEeccCCCCCCCC
Q psy10547 131 NTFNGIFIKNLQLSHCRINSITPNA----FRHLEFTLKHLNLQENDLEQV-----PVETLRHLKNLTLIDLSKNKIGKIP 201 (269)
Q Consensus 131 ~~~~~~~L~~L~l~~n~i~~~~~~~----~~~l~~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~i~~i~ 201 (269)
.+-..+.|++++...|++..-+... |..-. +|+++.+..|.|..- ....+..+.+|+.||+++|-++...
T Consensus 152 Kaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~-~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~g 230 (388)
T COG5238 152 KAADKPKLEVVICGRNRLENGSKELSAALLESHE-NLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEG 230 (388)
T ss_pred hhccCCCceEEEeccchhccCcHHHHHHHHHhhc-CceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhh
Confidence 1112226889999999987654432 22233 799999999987632 2223455789999999999887543
Q ss_pred C----CcccCCCCCCEEEcCCCccc--cccc---ccc--CcCCCceeeeccCcccc---------------cccccceee
Q psy10547 202 D----DSFSTLNNLVTLKLSDNNLT--LYKN---SFR--GLELNNNLTLYKNSFRG---------------LELSLKNLN 255 (269)
Q Consensus 202 ~----~~~~~l~~L~~L~L~~n~l~--~~p~---~~~--~l~~L~~l~l~~n~~~~---------------l~~~L~~L~ 255 (269)
. .++..|+.|+.|.+.+|.++ +... .+. ..++|..|-..+|.+.+ +| -|..|.
T Consensus 231 S~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p-~L~~le 309 (388)
T COG5238 231 SRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVP-LLVDLE 309 (388)
T ss_pred HHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccH-HHHHHH
Confidence 3 45678888999999999886 2222 222 23566667666665543 33 677888
Q ss_pred cCCCCCCCC
Q psy10547 256 LKNTKLKSV 264 (269)
Q Consensus 256 l~~n~l~~~ 264 (269)
+.+|+|++.
T Consensus 310 ~ngNr~~E~ 318 (388)
T COG5238 310 RNGNRIKEL 318 (388)
T ss_pred HccCcchhH
Confidence 888888764
No 53
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.09 E-value=1.6e-05 Score=69.13 Aligned_cols=124 Identities=19% Similarity=0.322 Sum_probs=70.8
Q ss_pred cccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCC-CCCccChhHHhhccccccEEEccCC-CCCccC
Q psy10547 100 FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHC-RINSITPNAFRHLEFTLKHLNLQEN-DLEQVP 177 (269)
Q Consensus 100 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n-~i~~~~~~~~~~l~~~L~~L~l~~n-~l~~~~ 177 (269)
.++.|++++|.++.++ .++. +|+.|.++++ .++.+ |+.+ +.+|++|++++| .+..+|
T Consensus 53 ~l~~L~Is~c~L~sLP-----~LP~------------sLtsL~Lsnc~nLtsL-P~~L---P~nLe~L~Ls~Cs~L~sLP 111 (426)
T PRK15386 53 ASGRLYIKDCDIESLP-----VLPN------------ELTEITIENCNNLTTL-PGSI---PEGLEKLTVCHCPEISGLP 111 (426)
T ss_pred CCCEEEeCCCCCcccC-----CCCC------------CCcEEEccCCCCcccC-Cchh---hhhhhheEccCcccccccc
Confidence 4888999988777663 3332 6888888764 44333 4333 237899999988 555554
Q ss_pred hhhhcCCCCCCEEeccCCCCCCCCCCcccCC-CCCCEEEcCCCc-cc--cccccccCc-CCCceeeeccCccc----ccc
Q psy10547 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTL-NNLVTLKLSDNN-LT--LYKNSFRGL-ELNNNLTLYKNSFR----GLE 248 (269)
Q Consensus 178 ~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l-~~L~~L~L~~n~-l~--~~p~~~~~l-~~L~~l~l~~n~~~----~l~ 248 (269)
++|+.|+++.+....+. .+ ++|+.|.+.+++ .. .+|. .+ ++|+.|++.+|... ++|
T Consensus 112 -------~sLe~L~L~~n~~~~L~-----~LPssLk~L~I~~~n~~~~~~lp~---~LPsSLk~L~Is~c~~i~LP~~LP 176 (426)
T PRK15386 112 -------ESVRSLEIKGSATDSIK-----NVPNGLTSLSINSYNPENQARIDN---LISPSLKTLSLTGCSNIILPEKLP 176 (426)
T ss_pred -------cccceEEeCCCCCcccc-----cCcchHhheecccccccccccccc---ccCCcccEEEecCCCcccCccccc
Confidence 35777777766543221 11 235555553322 11 1111 11 45667777666543 255
Q ss_pred cccceeecCCC
Q psy10547 249 LSLKNLNLKNT 259 (269)
Q Consensus 249 ~~L~~L~l~~n 259 (269)
.+|+.|+++.+
T Consensus 177 ~SLk~L~ls~n 187 (426)
T PRK15386 177 ESLQSITLHIE 187 (426)
T ss_pred ccCcEEEeccc
Confidence 66777777665
No 54
>KOG3665|consensus
Probab=98.04 E-value=4.2e-06 Score=78.11 Aligned_cols=124 Identities=18% Similarity=0.281 Sum_probs=92.1
Q ss_pred cccEEEcCCCCC-CccChhHHhhccccccEEEccCCCCCccC-hhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEE
Q psy10547 137 FIKNLQLSHCRI-NSITPNAFRHLEFTLKHLNLQENDLEQVP-VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTL 214 (269)
Q Consensus 137 ~L~~L~l~~n~i-~~~~~~~~~~l~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L 214 (269)
+|++|++++... ..-.+..++.+-|+|+.|.+++-.+..-. .....++++|..||+|++.++.+. .++.+++|+.|
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~--GIS~LknLq~L 200 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLS--GISRLKNLQVL 200 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcH--HHhccccHHHH
Confidence 799999988743 33344555554459999999986654321 233467899999999999998883 58899999999
Q ss_pred EcCCCcccccc--ccccCcCCCceeeeccCcccc--------------cccccceeecCCCCCCC
Q psy10547 215 KLSDNNLTLYK--NSFRGLELNNNLTLYKNSFRG--------------LELSLKNLNLKNTKLKS 263 (269)
Q Consensus 215 ~L~~n~l~~~p--~~~~~l~~L~~l~l~~n~~~~--------------l~~~L~~L~l~~n~l~~ 263 (269)
.+.+=.+.... ..+.++++|+.||++...... +| +|+.||.|++.+.+
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~Lp-eLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLP-ELRFLDCSGTDINE 264 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCc-cccEEecCCcchhH
Confidence 98876776433 367889999999999875443 44 99999999887653
No 55
>KOG4658|consensus
Probab=97.98 E-value=6.3e-06 Score=78.90 Aligned_cols=105 Identities=23% Similarity=0.328 Sum_probs=88.7
Q ss_pred cccEEEecCCC--ccccCcCCCCCCc-ccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccCh
Q psy10547 77 PLDLLYINNSA--IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITP 153 (269)
Q Consensus 77 ~l~~l~l~~~~--i~~l~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~ 153 (269)
.+++|-+..|. +..++.+.|..+. |+.||+++|.-.+..|...+.+- +|++|+++++.+..+ |
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li-------------~LryL~L~~t~I~~L-P 611 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELV-------------HLRYLDLSDTGISHL-P 611 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhh-------------hhhcccccCCCcccc-c
Confidence 57888888886 8899999999887 99999999876566687888888 888899999999976 5
Q ss_pred hHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCC
Q psy10547 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196 (269)
Q Consensus 154 ~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 196 (269)
..++++. +|.+|++..+......++....+++|++|.+....
T Consensus 612 ~~l~~Lk-~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 612 SGLGNLK-KLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hHHHHHH-hhheeccccccccccccchhhhcccccEEEeeccc
Confidence 6899999 99999999988666667777779999999987654
No 56
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.97 E-value=7.9e-05 Score=64.88 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=20.5
Q ss_pred CcccEEEecCCCccccCcCCCCCCcccEEEecCCC
Q psy10547 76 VPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCR 110 (269)
Q Consensus 76 ~~l~~l~l~~~~i~~l~~~~~~~~~L~~L~l~~n~ 110 (269)
..++.|++++|.+..+|. . ..+|+.|.++++.
T Consensus 52 ~~l~~L~Is~c~L~sLP~-L--P~sLtsL~Lsnc~ 83 (426)
T PRK15386 52 RASGRLYIKDCDIESLPV-L--PNELTEITIENCN 83 (426)
T ss_pred cCCCEEEeCCCCCcccCC-C--CCCCcEEEccCCC
Confidence 446778888887777771 1 1237788877653
No 57
>KOG2123|consensus
Probab=97.70 E-value=2.1e-06 Score=69.79 Aligned_cols=81 Identities=25% Similarity=0.351 Sum_probs=48.4
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCC-CcccCCCCCCEEE
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD-DSFSTLNNLVTLK 215 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~-~~~~~l~~L~~L~ 215 (269)
++++|+..++.+.++ .....++ .|+.|.|+-|+|+.+.+ +..+++|+.|.|..|.|.++.+ ..+.++++|+.|.
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp-~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMP-LLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcc-cceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 455666666666665 2344555 66666666666666643 5666666666666666655542 2344556666666
Q ss_pred cCCCccc
Q psy10547 216 LSDNNLT 222 (269)
Q Consensus 216 L~~n~l~ 222 (269)
|..|.-.
T Consensus 95 L~ENPCc 101 (388)
T KOG2123|consen 95 LDENPCC 101 (388)
T ss_pred hccCCcc
Confidence 6666543
No 58
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.63 E-value=3.7e-05 Score=62.58 Aligned_cols=152 Identities=18% Similarity=0.166 Sum_probs=94.2
Q ss_pred cccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHh-------------hccccccEE
Q psy10547 100 FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR-------------HLEFTLKHL 166 (269)
Q Consensus 100 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~-------------~l~~~L~~L 166 (269)
.+++.++|.|.+....|..+..+-+-.. .+.+|.+++|.+..+...-++ .- +.|+..
T Consensus 93 ~l~~v~LSDNAfg~~~~e~L~d~is~~t---------~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~k-p~Le~v 162 (388)
T COG5238 93 RLQKVDLSDNAFGSEFPEELGDLISSST---------DLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADK-PKLEVV 162 (388)
T ss_pred cceeeeccccccCcccchHHHHHHhcCC---------CceeEEeecCCCCccchhHHHHHHHHHHHHhhhccC-CCceEE
Confidence 3666677777666554443332221111 678888888877665443332 12 368888
Q ss_pred EccCCCCCccCh----hhhcCCCCCCEEeccCCCCCCCC--C---CcccCCCCCCEEEcCCCccc-----cccccccCcC
Q psy10547 167 NLQENDLEQVPV----ETLRHLKNLTLIDLSKNKIGKIP--D---DSFSTLNNLVTLKLSDNNLT-----LYKNSFRGLE 232 (269)
Q Consensus 167 ~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~i~~i~--~---~~~~~l~~L~~L~L~~n~l~-----~~p~~~~~l~ 232 (269)
...+|++..-+. ..+..-..|+.+.+..|.|..-. . --+..+.+|+.|++++|-++ .+..++..++
T Consensus 163 icgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~ 242 (388)
T COG5238 163 ICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWN 242 (388)
T ss_pred EeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccc
Confidence 888888765442 23334467888888888775321 1 01235678889999988887 2345677778
Q ss_pred CCceeeeccCcccc--------------cccccceeecCCCCCC
Q psy10547 233 LNNNLTLYKNSFRG--------------LELSLKNLNLKNTKLK 262 (269)
Q Consensus 233 ~L~~l~l~~n~~~~--------------l~~~L~~L~l~~n~l~ 262 (269)
.|+.|.+..|-++. . ++|..|-..+|.+.
T Consensus 243 ~lrEL~lnDClls~~G~~~v~~~f~e~~~-p~l~~L~~~Yne~~ 285 (388)
T COG5238 243 LLRELRLNDCLLSNEGVKSVLRRFNEKFV-PNLMPLPGDYNERR 285 (388)
T ss_pred hhhhccccchhhccccHHHHHHHhhhhcC-CCccccccchhhhc
Confidence 88888888775543 2 37777777777544
No 59
>KOG2982|consensus
Probab=97.35 E-value=2.9e-05 Score=63.90 Aligned_cols=170 Identities=21% Similarity=0.278 Sum_probs=90.5
Q ss_pred cEEEecCCCccccCcCC-CC-CCc-ccEEEecCCCCcccCc--ccccCCcccccccccccccccccEEEcCCCCCCccCh
Q psy10547 79 DLLYINNSAIRNINENT-FN-GIF-IKNLQLSHCRINSITP--NAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITP 153 (269)
Q Consensus 79 ~~l~l~~~~i~~l~~~~-~~-~~~-L~~L~l~~n~l~~~~~--~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~ 153 (269)
..+-+.++.|....... |. ... ++.+|+.+|.|+.... ..+.+++ .+++|+++.|++.....
T Consensus 48 ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP-------------~l~~LNls~N~L~s~I~ 114 (418)
T KOG2982|consen 48 ELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLP-------------ALTTLNLSCNSLSSDIK 114 (418)
T ss_pred hhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCc-------------cceEeeccCCcCCCccc
Confidence 34555555555443221 11 112 7778888887775432 2356677 67777777777654332
Q ss_pred hHHhhccccccEEEccCCCCC-ccChhhhcCCCCCCEEeccCCCCCC--CCCCcccCCC-CCCEEEcCC-----------
Q psy10547 154 NAFRHLEFTLKHLNLQENDLE-QVPVETLRHLKNLTLIDLSKNKIGK--IPDDSFSTLN-NLVTLKLSD----------- 218 (269)
Q Consensus 154 ~~~~~l~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~i~~--i~~~~~~~l~-~L~~L~L~~----------- 218 (269)
..-.... +|+.|-+.+..+. ......+..++.++.|.++.|.++. +.++....+. .+++|++..
T Consensus 115 ~lp~p~~-nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~ 193 (418)
T KOG2982|consen 115 SLPLPLK-NLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNK 193 (418)
T ss_pred cCccccc-ceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHh
Confidence 1112334 6777777776654 2223345666777777777775432 2222222222 334444333
Q ss_pred ---------------Cccccc--cccccCcCCCceeeeccCcccc---------cccccceeecCCCCCCC
Q psy10547 219 ---------------NNLTLY--KNSFRGLELNNNLTLYKNSFRG---------LELSLKNLNLKNTKLKS 263 (269)
Q Consensus 219 ---------------n~l~~~--p~~~~~l~~L~~l~l~~n~~~~---------l~~~L~~L~l~~n~l~~ 263 (269)
|.+... .+....++++..|+++.|++.+ . +.|+.|.+++|++.+
T Consensus 194 l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f-~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 194 LSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGF-PQLVDLRVSENPLSD 263 (418)
T ss_pred HHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCC-chhheeeccCCcccc
Confidence 333211 1223334555566777766654 3 478888888888765
No 60
>KOG2120|consensus
Probab=97.31 E-value=4.7e-05 Score=62.72 Aligned_cols=202 Identities=19% Similarity=0.167 Sum_probs=100.8
Q ss_pred CceEEEecCCCCCchhhhhhhhccCCCCcccEEEecCCCcccc-CcCCCCCCc--ccEEEecCCCCcccC-cccccCCcc
Q psy10547 49 NELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNI-NENTFNGIF--IKNLQLSHCRINSIT-PNAFRHLDA 124 (269)
Q Consensus 49 ~~~~v~C~~~~~~~~~~~~l~~~~~~~~~l~~l~l~~~~i~~l-~~~~~~~~~--L~~L~l~~n~l~~~~-~~~~~~l~~ 124 (269)
.|..++-.+..-.|...+.+...- ..++.+....+.+- -.+.|.... ++++|++...|+.-. -.-+..+.+
T Consensus 137 lW~~lDl~~r~i~p~~l~~l~~rg-----V~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~k 211 (419)
T KOG2120|consen 137 LWQTLDLTGRNIHPDVLGRLLSRG-----VIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSK 211 (419)
T ss_pred ceeeeccCCCccChhHHHHHHhCC-----eEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHh
Confidence 344444443333344444443321 24455554333322 123334333 888888888777421 222444554
Q ss_pred cccccccccc-----------cccccEEEcCCC-CCCccCh-hHHhhccccccEEEccCCCCCccChhh-h-cCCCCCCE
Q psy10547 125 IRNINENTFN-----------GIFIKNLQLSHC-RINSITP-NAFRHLEFTLKHLNLQENDLEQVPVET-L-RHLKNLTL 189 (269)
Q Consensus 125 L~~l~~~~~~-----------~~~L~~L~l~~n-~i~~~~~-~~~~~l~~~L~~L~l~~n~l~~~~~~~-~-~~l~~L~~ 189 (269)
|+.|+..... ...|..++++.+ .++.... -.+..+. .|.+|+++.+.+..-...+ . .--++|+.
T Consensus 212 Lk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs-~L~~LNlsWc~l~~~~Vtv~V~hise~l~~ 290 (419)
T KOG2120|consen 212 LKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCS-RLDELNLSWCFLFTEKVTVAVAHISETLTQ 290 (419)
T ss_pred hhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhh-hHhhcCchHhhccchhhhHHHhhhchhhhh
Confidence 4443321111 115667777665 4443322 2244555 6777777777655311111 1 11245666
Q ss_pred EeccCCCC----CCCCCCcccCCCCCCEEEcCCCc-cc-cccccccCcCCCceeeeccC---------ccccccccccee
Q psy10547 190 IDLSKNKI----GKIPDDSFSTLNNLVTLKLSDNN-LT-LYKNSFRGLELNNNLTLYKN---------SFRGLELSLKNL 254 (269)
Q Consensus 190 L~l~~n~i----~~i~~~~~~~l~~L~~L~L~~n~-l~-~~p~~~~~l~~L~~l~l~~n---------~~~~l~~~L~~L 254 (269)
|+++|+.- .++. .-....++|.+|||++|. ++ ..-..+..++.|+++.++.+ .+.+.| .+.+|
T Consensus 291 LNlsG~rrnl~~sh~~-tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~i~p~~~~~l~s~p-sl~yL 368 (419)
T KOG2120|consen 291 LNLSGYRRNLQKSHLS-TLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYDIIPETLLELNSKP-SLVYL 368 (419)
T ss_pred hhhhhhHhhhhhhHHH-HHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcCCChHHeeeeccCc-ceEEE
Confidence 66666531 1111 112345777888887763 44 34456777777888877765 223344 66777
Q ss_pred ecCC
Q psy10547 255 NLKN 258 (269)
Q Consensus 255 ~l~~ 258 (269)
|.-+
T Consensus 369 dv~g 372 (419)
T KOG2120|consen 369 DVFG 372 (419)
T ss_pred Eecc
Confidence 6654
No 61
>KOG2982|consensus
Probab=97.28 E-value=7.6e-05 Score=61.51 Aligned_cols=151 Identities=22% Similarity=0.218 Sum_probs=88.9
Q ss_pred ccEEEecCCCCcccCcc-cccCCcccccccccccccccccEEEcCCCCCCccCh--hHHhhccccccEEEccCCCCCccC
Q psy10547 101 IKNLQLSHCRINSITPN-AFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITP--NAFRHLEFTLKHLNLQENDLEQVP 177 (269)
Q Consensus 101 L~~L~l~~n~l~~~~~~-~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~--~~~~~l~~~L~~L~l~~n~l~~~~ 177 (269)
++-|.+.++.|..+... .|+...+ .++.+||.+|.|++... ..+.+++ .++.|+++.|.+....
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~------------~v~elDL~~N~iSdWseI~~ile~lP-~l~~LNls~N~L~s~I 113 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVT------------DVKELDLTGNLISDWSEIGAILEQLP-ALTTLNLSCNSLSSDI 113 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhh------------hhhhhhcccchhccHHHHHHHHhcCc-cceEeeccCCcCCCcc
Confidence 45666667766655432 1222111 67788999998876432 2345566 8999999999887655
Q ss_pred hhhhcCCCCCCEEeccCCCCC-CCCCCcccCCCCCCEEEcCCCccccc---cccccCcC-CCceeeec---------cCc
Q psy10547 178 VETLRHLKNLTLIDLSKNKIG-KIPDDSFSTLNNLVTLKLSDNNLTLY---KNSFRGLE-LNNNLTLY---------KNS 243 (269)
Q Consensus 178 ~~~~~~l~~L~~L~l~~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~---p~~~~~l~-~L~~l~l~---------~n~ 243 (269)
.+.-....+|+.|-+.+..+. .-....+..+++++.|+++.|.+..+ .+.+...+ .+.++... -|+
T Consensus 114 ~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~ 193 (418)
T KOG2982|consen 114 KSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNK 193 (418)
T ss_pred ccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHh
Confidence 332235678888888887762 22223566778888888888855422 11222222 23333333 334
Q ss_pred ccccccccceeecCCCCCCCC
Q psy10547 244 FRGLELSLKNLNLKNTKLKSV 264 (269)
Q Consensus 244 ~~~l~~~L~~L~l~~n~l~~~ 264 (269)
+..+-+++..+-+-.|+++..
T Consensus 194 l~r~Fpnv~sv~v~e~PlK~~ 214 (418)
T KOG2982|consen 194 LSRIFPNVNSVFVCEGPLKTE 214 (418)
T ss_pred HHhhcccchheeeecCcccch
Confidence 444334777777777776654
No 62
>KOG3665|consensus
Probab=97.20 E-value=0.00025 Score=66.46 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=81.3
Q ss_pred ccEEEecCCCCcccC-c-ccccCCcccccccccccccccccEEEcCCCCCCccC-hhHHhhccccccEEEccCCCCCccC
Q psy10547 101 IKNLQLSHCRINSIT-P-NAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSIT-PNAFRHLEFTLKHLNLQENDLEQVP 177 (269)
Q Consensus 101 L~~L~l~~n~l~~~~-~-~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~-~~~~~~l~~~L~~L~l~~n~l~~~~ 177 (269)
|++|+++|...-... + ..-..+| +|+.|.+.+-.+..-. ...+.+++ +|..||+++++++.+
T Consensus 124 L~~LdI~G~~~~s~~W~~kig~~LP-------------sL~sL~i~~~~~~~~dF~~lc~sFp-NL~sLDIS~TnI~nl- 188 (699)
T KOG3665|consen 124 LQHLDISGSELFSNGWPKKIGTMLP-------------SLRSLVISGRQFDNDDFSQLCASFP-NLRSLDISGTNISNL- 188 (699)
T ss_pred hhhcCccccchhhccHHHHHhhhCc-------------ccceEEecCceecchhHHHHhhccC-ccceeecCCCCccCc-
Confidence 888888886533211 2 2234466 6777888776664432 23445566 888888888888877
Q ss_pred hhhhcCCCCCCEEeccCCCCCC-CCCCcccCCCCCCEEEcCCCcccccc-------ccccCcCCCceeeeccCcccc
Q psy10547 178 VETLRHLKNLTLIDLSKNKIGK-IPDDSFSTLNNLVTLKLSDNNLTLYK-------NSFRGLELNNNLTLYKNSFRG 246 (269)
Q Consensus 178 ~~~~~~l~~L~~L~l~~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~p-------~~~~~l~~L~~l~l~~n~~~~ 246 (269)
..++.+++|+.|.+.+=.+.. -.-..+.++++|+.||++.......+ +.-..++.|+.||.++..+..
T Consensus 189 -~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 189 -SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred -HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 447778888888776644432 11113457788888888865443221 233447788888888776654
No 63
>KOG2123|consensus
Probab=97.15 E-value=2.4e-05 Score=63.77 Aligned_cols=79 Identities=28% Similarity=0.453 Sum_probs=44.6
Q ss_pred ccEEEecCCCCcccCcccccCCcccccccccccccccccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccCh-h
Q psy10547 101 IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV-E 179 (269)
Q Consensus 101 L~~L~l~~n~l~~~~~~~~~~l~~L~~l~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~ 179 (269)
+++|++.|+.+..|. ....|+ .|++|.|+-|.|+.+.| |.... +|++|.|..|.|..+.. .
T Consensus 21 vkKLNcwg~~L~DIs--ic~kMp-------------~lEVLsLSvNkIssL~p--l~rCt-rLkElYLRkN~I~sldEL~ 82 (388)
T KOG2123|consen 21 VKKLNCWGCGLDDIS--ICEKMP-------------LLEVLSLSVNKISSLAP--LQRCT-RLKELYLRKNCIESLDELE 82 (388)
T ss_pred hhhhcccCCCccHHH--HHHhcc-------------cceeEEeeccccccchh--HHHHH-HHHHHHHHhcccccHHHHH
Confidence 455666666666553 234555 55666666666666543 44555 56666666666665532 2
Q ss_pred hhcCCCCCCEEeccCCCC
Q psy10547 180 TLRHLKNLTLIDLSKNKI 197 (269)
Q Consensus 180 ~~~~l~~L~~L~l~~n~i 197 (269)
-+.++++|+.|.|..|.-
T Consensus 83 YLknlpsLr~LWL~ENPC 100 (388)
T KOG2123|consen 83 YLKNLPSLRTLWLDENPC 100 (388)
T ss_pred HHhcCchhhhHhhccCCc
Confidence 235566666666666544
No 64
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.82 E-value=0.0004 Score=34.06 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=12.3
Q ss_pred ccceeecCCCCCCCCCCCC
Q psy10547 250 SLKNLNLKNTKLKSVTPYW 268 (269)
Q Consensus 250 ~L~~L~l~~n~l~~~p~~~ 268 (269)
+|++||+++|+|+.+|++|
T Consensus 1 ~L~~Ldls~n~l~~ip~~~ 19 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSF 19 (22)
T ss_dssp TESEEEETSSEESEEGTTT
T ss_pred CccEEECCCCcCEeCChhh
Confidence 3566677777666666654
No 65
>KOG2120|consensus
Probab=96.59 E-value=8.7e-05 Score=61.21 Aligned_cols=123 Identities=24% Similarity=0.189 Sum_probs=75.7
Q ss_pred cccEEEcCCCCCCccChh-HHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCC-CCCCCC-CcccCCCCCCE
Q psy10547 137 FIKNLQLSHCRINSITPN-AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK-IGKIPD-DSFSTLNNLVT 213 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~-~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-i~~i~~-~~~~~l~~L~~ 213 (269)
.++++||++..|+.-.-. .++... +|+.|.+.++.+..-....+....+|+.|+++++. +++-.. -.+.++..|.+
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~-kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCS-KLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHH-hhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 477888888877754322 233344 78888888888887666677777888888888753 333221 13456677888
Q ss_pred EEcCCCcccc--ccccccC-cCCCceeeeccCc--c--cccc------cccceeecCCCC
Q psy10547 214 LKLSDNNLTL--YKNSFRG-LELNNNLTLYKNS--F--RGLE------LSLKNLNLKNTK 260 (269)
Q Consensus 214 L~L~~n~l~~--~p~~~~~-l~~L~~l~l~~n~--~--~~l~------~~L~~L~l~~n~ 260 (269)
|++++|.+.. +-..+.+ -..|..|++++.. | .++. +++.+||||+|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v 324 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSV 324 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeecccccc
Confidence 8888886641 1111222 1346666666531 1 1111 489999999864
No 66
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=96.44 E-value=0.0017 Score=29.56 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=7.8
Q ss_pred ccceeecCCCCCCCCC
Q psy10547 250 SLKNLNLKNTKLKSVT 265 (269)
Q Consensus 250 ~L~~L~l~~n~l~~~p 265 (269)
+|++|++++|+|+.+|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 5666666666666655
No 67
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.41 E-value=0.0016 Score=31.81 Aligned_cols=19 Identities=53% Similarity=0.555 Sum_probs=10.1
Q ss_pred CCEEEcCCCcccccccccc
Q psy10547 211 LVTLKLSDNNLTLYKNSFR 229 (269)
Q Consensus 211 L~~L~L~~n~l~~~p~~~~ 229 (269)
|++|++++|+++.+|++++
T Consensus 2 L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp ESEEEETSSEESEEGTTTT
T ss_pred ccEEECCCCcCEeCChhhc
Confidence 4555555555555554433
No 68
>KOG2739|consensus
Probab=96.28 E-value=0.0036 Score=50.76 Aligned_cols=83 Identities=27% Similarity=0.408 Sum_probs=47.7
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCC--CCCc-cChhhhcCCCCCCEEeccCCCCCCCCC-CcccCCCCCC
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN--DLEQ-VPVETLRHLKNLTLIDLSKNKIGKIPD-DSFSTLNNLV 212 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n--~l~~-~~~~~~~~l~~L~~L~l~~n~i~~i~~-~~~~~l~~L~ 212 (269)
.++.+.+.+..++.. ..|..++ +|++|.++.| .+.. +.. ....+++|+++++++|+|..+.. .....+.+|.
T Consensus 44 ~le~ls~~n~gltt~--~~~P~Lp-~LkkL~lsdn~~~~~~~l~v-l~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~ 119 (260)
T KOG2739|consen 44 ELELLSVINVGLTTL--TNFPKLP-KLKKLELSDNYRRVSGGLEV-LAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLK 119 (260)
T ss_pred chhhhhhhccceeec--ccCCCcc-hhhhhcccCCccccccccee-hhhhCCceeEEeecCCccccccccchhhhhcchh
Confidence 455566666555544 3355566 7778888777 4332 221 12344777788887777653210 1234556677
Q ss_pred EEEcCCCcccc
Q psy10547 213 TLKLSDNNLTL 223 (269)
Q Consensus 213 ~L~L~~n~l~~ 223 (269)
.|++.+|..+.
T Consensus 120 ~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 120 SLDLFNCSVTN 130 (260)
T ss_pred hhhcccCCccc
Confidence 77777766553
No 69
>KOG2739|consensus
Probab=96.07 E-value=0.0045 Score=50.20 Aligned_cols=94 Identities=26% Similarity=0.328 Sum_probs=63.7
Q ss_pred cccEEEccCCCCCccChhhhcCCCCCCEEeccCC--CCC-CCCCCcccCCCCCCEEEcCCCcccccc--ccccCcCCCce
Q psy10547 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN--KIG-KIPDDSFSTLNNLVTLKLSDNNLTLYK--NSFRGLELNNN 236 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n--~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~p--~~~~~l~~L~~ 236 (269)
.++.+++.+..++.+. .|..+++|+.|.++.| ++. +++. .....++|+++.++.|++..+. ..+..+.+|..
T Consensus 44 ~le~ls~~n~gltt~~--~~P~Lp~LkkL~lsdn~~~~~~~l~v-l~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~ 120 (260)
T KOG2739|consen 44 ELELLSVINVGLTTLT--NFPKLPKLKKLELSDNYRRVSGGLEV-LAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKS 120 (260)
T ss_pred chhhhhhhccceeecc--cCCCcchhhhhcccCCccccccccee-hhhhCCceeEEeecCCccccccccchhhhhcchhh
Confidence 5777777777777664 3667889999999999 442 3332 2334589999999999987532 24556677778
Q ss_pred eeeccCcccccc----------cccceeecCC
Q psy10547 237 LTLYKNSFRGLE----------LSLKNLNLKN 258 (269)
Q Consensus 237 l~l~~n~~~~l~----------~~L~~L~l~~ 258 (269)
|++..|..+.+. ++|+.||-..
T Consensus 121 Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 121 LDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred hhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 888887665532 3666665443
No 70
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.25 E-value=0.016 Score=29.46 Aligned_cols=21 Identities=38% Similarity=0.718 Sum_probs=10.9
Q ss_pred CCCCEEeccCCCCCCCCCCcc
Q psy10547 185 KNLTLIDLSKNKIGKIPDDSF 205 (269)
Q Consensus 185 ~~L~~L~l~~n~i~~i~~~~~ 205 (269)
++|++|++++|+++.+|++.|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345555555555555554443
No 71
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.25 E-value=0.016 Score=29.46 Aligned_cols=21 Identities=38% Similarity=0.718 Sum_probs=10.9
Q ss_pred CCCCEEeccCCCCCCCCCCcc
Q psy10547 185 KNLTLIDLSKNKIGKIPDDSF 205 (269)
Q Consensus 185 ~~L~~L~l~~n~i~~i~~~~~ 205 (269)
++|++|++++|+++.+|++.|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 345555555555555554443
No 72
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.23 E-value=0.013 Score=26.55 Aligned_cols=13 Identities=62% Similarity=0.664 Sum_probs=4.3
Q ss_pred CCEEEcCCCcccc
Q psy10547 211 LVTLKLSDNNLTL 223 (269)
Q Consensus 211 L~~L~L~~n~l~~ 223 (269)
|+.|++++|+++.
T Consensus 3 L~~L~l~~n~L~~ 15 (17)
T PF13504_consen 3 LRTLDLSNNRLTS 15 (17)
T ss_dssp -SEEEETSS--SS
T ss_pred cCEEECCCCCCCC
Confidence 4444444444433
No 73
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=95.15 E-value=0.014 Score=30.34 Aligned_cols=26 Identities=23% Similarity=0.513 Sum_probs=16.8
Q ss_pred cCCcceeecCCCCceEEEecCCCCCchhhhhh
Q psy10547 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATL 68 (269)
Q Consensus 37 ~~~~C~C~~~~~~~~~v~C~~~~~~~~~~~~l 68 (269)
||..|.|.. ..|.|. ..++..+|..+
T Consensus 2 CP~~C~C~~-----~~V~C~-~~~L~~vP~~l 27 (28)
T PF01462_consen 2 CPRPCTCSG-----LTVDCS-GRGLTAVPSDL 27 (28)
T ss_dssp SETTSEEET-----TEEEET-TSS-SSS-STS
T ss_pred cCCCCEecC-----CEeECC-CCCCCccCCCC
Confidence 567899985 789999 44555554443
No 74
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.43 E-value=0.024 Score=28.75 Aligned_cols=18 Identities=39% Similarity=0.674 Sum_probs=12.2
Q ss_pred ccceeecCCCCCCCCCCC
Q psy10547 250 SLKNLNLKNTKLKSVTPY 267 (269)
Q Consensus 250 ~L~~L~l~~n~l~~~p~~ 267 (269)
+|+.|+|++|+|+.+|++
T Consensus 3 ~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00369 3 NLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCEEECCCCcCCcCCHH
Confidence 566677777777776654
No 75
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.43 E-value=0.024 Score=28.75 Aligned_cols=18 Identities=39% Similarity=0.674 Sum_probs=12.2
Q ss_pred ccceeecCCCCCCCCCCC
Q psy10547 250 SLKNLNLKNTKLKSVTPY 267 (269)
Q Consensus 250 ~L~~L~l~~n~l~~~p~~ 267 (269)
+|+.|+|++|+|+.+|++
T Consensus 3 ~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00370 3 NLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCEEECCCCcCCcCCHH
Confidence 566677777777776654
No 76
>KOG3864|consensus
Probab=93.99 E-value=0.018 Score=45.14 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=18.2
Q ss_pred ccCcCCCCCCcccEEEecCCCCcccCcccccCCc
Q psy10547 90 NINENTFNGIFIKNLQLSHCRINSITPNAFRHLD 123 (269)
Q Consensus 90 ~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 123 (269)
..|...+..+.++.++-++..|..++-..+.+++
T Consensus 92 ~lp~~~~~~~~IeaVDAsds~I~~eGle~L~~l~ 125 (221)
T KOG3864|consen 92 SLPGPNADNVKIEAVDASDSSIMYEGLEHLRDLR 125 (221)
T ss_pred cCCCCCCCcceEEEEecCCchHHHHHHHHHhccc
Confidence 3444434444466666666666665544455555
No 77
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=93.70 E-value=0.054 Score=29.31 Aligned_cols=28 Identities=18% Similarity=0.335 Sum_probs=20.0
Q ss_pred cCCcceeecCCCCceEEEecCCCCCchhhhhhhh
Q psy10547 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNK 70 (269)
Q Consensus 37 ~~~~C~C~~~~~~~~~v~C~~~~~~~~~~~~l~~ 70 (269)
||..|.|.. ..|.|. ..++..+|..+|.
T Consensus 2 CP~~C~C~~-----~~V~C~-~~~L~~vP~~iP~ 29 (33)
T smart00013 2 CPAPCNCSG-----TAVDCS-GRGLTEVPLDLPP 29 (33)
T ss_pred cCCCCEECC-----CEeEeC-CCCcCccCCCCCc
Confidence 567899973 679999 5566666666654
No 78
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=92.77 E-value=0.076 Score=26.91 Aligned_cols=17 Identities=47% Similarity=0.657 Sum_probs=11.0
Q ss_pred ccceeecCCCCCCCCCC
Q psy10547 250 SLKNLNLKNTKLKSVTP 266 (269)
Q Consensus 250 ~L~~L~l~~n~l~~~p~ 266 (269)
+|+.|+.++|+++.+|.
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 56666666666666664
No 79
>KOG0473|consensus
Probab=92.75 E-value=0.002 Score=51.52 Aligned_cols=90 Identities=21% Similarity=0.208 Sum_probs=67.3
Q ss_pred hHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEcCCCccccccccccCcCC
Q psy10547 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLEL 233 (269)
Q Consensus 154 ~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~l~~ 233 (269)
-.+.... ..+.||++.|++..+-. .|+.++.+..++++.|++..+|. .+..+..+..+++..|..+..|.+++..+.
T Consensus 36 ~ei~~~k-r~tvld~~s~r~vn~~~-n~s~~t~~~rl~~sknq~~~~~~-d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~ 112 (326)
T KOG0473|consen 36 REIASFK-RVTVLDLSSNRLVNLGK-NFSILTRLVRLDLSKNQIKFLPK-DAKQQRETVNAASHKNNHSQQPKSQKKEPH 112 (326)
T ss_pred hhhhccc-eeeeehhhhhHHHhhcc-chHHHHHHHHHhccHhhHhhChh-hHHHHHHHHHHHhhccchhhCCccccccCC
Confidence 3344445 67888888888776653 36667778888888888888876 466777778888888888888888888888
Q ss_pred CceeeeccCcccc
Q psy10547 234 NNNLTLYKNSFRG 246 (269)
Q Consensus 234 L~~l~l~~n~~~~ 246 (269)
++.++...+.|..
T Consensus 113 ~k~~e~k~~~~~~ 125 (326)
T KOG0473|consen 113 PKKNEQKKTEFFR 125 (326)
T ss_pred cchhhhccCcchH
Confidence 8888887777653
No 80
>KOG0473|consensus
Probab=92.40 E-value=0.002 Score=51.56 Aligned_cols=82 Identities=18% Similarity=0.228 Sum_probs=62.5
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCccChhhhcCCCCCCEEeccCCCCCCCCCCcccCCCCCCEEEc
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~i~~~~~~~l~~L~~L~L 216 (269)
..+.||++.|++..+.. .|+.+. .+..|+++.|.+.-.+.+ ++....+..++...|.....|. ++...+.++.+++
T Consensus 43 r~tvld~~s~r~vn~~~-n~s~~t-~~~rl~~sknq~~~~~~d-~~q~~e~~~~~~~~n~~~~~p~-s~~k~~~~k~~e~ 118 (326)
T KOG0473|consen 43 RVTVLDLSSNRLVNLGK-NFSILT-RLVRLDLSKNQIKFLPKD-AKQQRETVNAASHKNNHSQQPK-SQKKEPHPKKNEQ 118 (326)
T ss_pred eeeeehhhhhHHHhhcc-chHHHH-HHHHHhccHhhHhhChhh-HHHHHHHHHHHhhccchhhCCc-cccccCCcchhhh
Confidence 67788888888776643 466666 788888888887777644 6667777778888888888875 6788888888888
Q ss_pred CCCccc
Q psy10547 217 SDNNLT 222 (269)
Q Consensus 217 ~~n~l~ 222 (269)
..|.+.
T Consensus 119 k~~~~~ 124 (326)
T KOG0473|consen 119 KKTEFF 124 (326)
T ss_pred ccCcch
Confidence 888765
No 81
>KOG4308|consensus
Probab=91.13 E-value=0.0052 Score=55.28 Aligned_cols=15 Identities=53% Similarity=0.587 Sum_probs=7.0
Q ss_pred CCCCCEEEcCCCccc
Q psy10547 208 LNNLVTLKLSDNNLT 222 (269)
Q Consensus 208 l~~L~~L~L~~n~l~ 222 (269)
..++++|.+.+|.++
T Consensus 203 ~~~le~L~L~~~~~t 217 (478)
T KOG4308|consen 203 LSSLETLKLSRCGVT 217 (478)
T ss_pred cccHHHHhhhhcCcC
Confidence 334455555544443
No 82
>KOG3864|consensus
Probab=89.23 E-value=0.061 Score=42.23 Aligned_cols=81 Identities=26% Similarity=0.215 Sum_probs=53.3
Q ss_pred cccEEEcCCCCCCccChhHHhhccccccEEEccCCCCCc-cChhhh-cCCCCCCEEeccCC-CCCCCCCCcccCCCCCCE
Q psy10547 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQ-VPVETL-RHLKNLTLIDLSKN-KIGKIPDDSFSTLNNLVT 213 (269)
Q Consensus 137 ~L~~L~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~-~~~~~~-~~l~~L~~L~l~~n-~i~~i~~~~~~~l~~L~~ 213 (269)
.++.+|-++..|....-+.+.++. +++.|.+.+++--. -.-+-+ +..++|+.|++++| +|++-.-..+..+++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~-~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLR-SIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccc-hhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 577888888888887777777777 78888887775321 100111 23567888888877 456555445666777777
Q ss_pred EEcCC
Q psy10547 214 LKLSD 218 (269)
Q Consensus 214 L~L~~ 218 (269)
|.+.+
T Consensus 181 L~l~~ 185 (221)
T KOG3864|consen 181 LHLYD 185 (221)
T ss_pred HHhcC
Confidence 77654
No 83
>KOG4308|consensus
Probab=88.09 E-value=0.004 Score=56.00 Aligned_cols=85 Identities=26% Similarity=0.327 Sum_probs=38.9
Q ss_pred cccEEEccCCCCCccC----hhhhcCCCC-CCEEeccCCCCCCCC----CCcccCC-CCCCEEEcCCCccc-----cccc
Q psy10547 162 TLKHLNLQENDLEQVP----VETLRHLKN-LTLIDLSKNKIGKIP----DDSFSTL-NNLVTLKLSDNNLT-----LYKN 226 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~----~~~~~~l~~-L~~L~l~~n~i~~i~----~~~~~~l-~~L~~L~L~~n~l~-----~~p~ 226 (269)
++++|++.++.++... ...+...+. +..+++..|++.... ...+..+ ..++.++++.|.|+ .+.+
T Consensus 205 ~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~ 284 (478)
T KOG4308|consen 205 SLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAE 284 (478)
T ss_pred cHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHH
Confidence 5555555555554211 122333333 444555555554321 0122233 34555666666554 2334
Q ss_pred cccCcCCCceeeeccCcccc
Q psy10547 227 SFRGLELNNNLTLYKNSFRG 246 (269)
Q Consensus 227 ~~~~l~~L~~l~l~~n~~~~ 246 (269)
.+.....++.+.++.|.+.+
T Consensus 285 ~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 285 VLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHhhhHHHHHhhcccCcccc
Confidence 44445555555555555443
No 84
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=87.30 E-value=0.51 Score=23.97 Aligned_cols=16 Identities=63% Similarity=0.777 Sum_probs=8.4
Q ss_pred CCCCEEeccCCCCCCC
Q psy10547 185 KNLTLIDLSKNKIGKI 200 (269)
Q Consensus 185 ~~L~~L~l~~n~i~~i 200 (269)
.+|+.|++++|+|+.+
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 3455555555555444
No 85
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=79.56 E-value=1.5 Score=22.53 Aligned_cols=13 Identities=54% Similarity=0.782 Sum_probs=8.7
Q ss_pred ccceeecCCCCCC
Q psy10547 250 SLKNLNLKNTKLK 262 (269)
Q Consensus 250 ~L~~L~l~~n~l~ 262 (269)
.|++|||++|.|.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 5667777777664
No 86
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=77.57 E-value=1.6 Score=21.32 Aligned_cols=14 Identities=57% Similarity=0.719 Sum_probs=6.1
Q ss_pred CCCCEEEcCCCccc
Q psy10547 209 NNLVTLKLSDNNLT 222 (269)
Q Consensus 209 ~~L~~L~L~~n~l~ 222 (269)
++|+.|++++|+|+
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34555555555544
No 87
>KOG1947|consensus
Probab=73.03 E-value=2.1 Score=38.37 Aligned_cols=34 Identities=29% Similarity=0.129 Sum_probs=14.3
Q ss_pred CCCCEEEcCCCc-cc--cccccccCcCCCceeeeccC
Q psy10547 209 NNLVTLKLSDNN-LT--LYKNSFRGLELNNNLTLYKN 242 (269)
Q Consensus 209 ~~L~~L~L~~n~-l~--~~p~~~~~l~~L~~l~l~~n 242 (269)
++|+.|.+.++. ++ ++-.....++.|++|+++++
T Consensus 269 ~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c 305 (482)
T KOG1947|consen 269 PNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGC 305 (482)
T ss_pred CCcceEccCCCCccchhHHHHHHHhcCcccEEeeecC
Confidence 445555544443 33 12223333444555555443
No 88
>KOG3763|consensus
Probab=69.94 E-value=2.7 Score=38.22 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=17.8
Q ss_pred CCCCCEEeccCCCCCCCCC--CcccCCCCCCEEEcCCC
Q psy10547 184 LKNLTLIDLSKNKIGKIPD--DSFSTLNNLVTLKLSDN 219 (269)
Q Consensus 184 l~~L~~L~l~~n~i~~i~~--~~~~~l~~L~~L~L~~n 219 (269)
.+.+..+.+++|++..+.. ..-...++|+.|+|++|
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 3445555566666554432 01112355666666666
No 89
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=57.43 E-value=6.8 Score=42.61 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=27.7
Q ss_pred EccCCCCCccChhhhcCCCCCCEEeccCCCCC
Q psy10547 167 NLQENDLEQVPVETLRHLKNLTLIDLSKNKIG 198 (269)
Q Consensus 167 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~ 198 (269)
||++|+|+.++.+.|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 57889999999998998999999999998764
No 90
>KOG3763|consensus
Probab=53.43 E-value=8.5 Score=35.17 Aligned_cols=60 Identities=28% Similarity=0.327 Sum_probs=36.5
Q ss_pred cccEEEccCCCCCccCh--hhhcCCCCCCEEeccCC--CCCCCCC-CcccCCCCCCEEEcCCCccc
Q psy10547 162 TLKHLNLQENDLEQVPV--ETLRHLKNLTLIDLSKN--KIGKIPD-DSFSTLNNLVTLKLSDNNLT 222 (269)
Q Consensus 162 ~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n--~i~~i~~-~~~~~l~~L~~L~L~~n~l~ 222 (269)
.+..+.+++|++..+.. ..-...++|..|+|++| .+....+ +.+++ ..|++|-+.+|.+.
T Consensus 219 ~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~-l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 219 EILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKG-LPLEELVLEGNPLC 283 (585)
T ss_pred ceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcC-CCHHHeeecCCccc
Confidence 67777888887776542 11234577888888888 3332221 11222 24788888888775
No 91
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=50.75 E-value=12 Score=40.90 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.5
Q ss_pred EcCCCCCCccChhHHhhccccccEEEccCCCCCc
Q psy10547 142 QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQ 175 (269)
Q Consensus 142 ~l~~n~i~~~~~~~~~~l~~~L~~L~l~~n~l~~ 175 (269)
||++|+|+.+.+..|..+. +|++|+|++|.+..
T Consensus 1 DLSnN~LstLp~g~F~~L~-sL~~LdLsgNPw~C 33 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLC-NLSEIDLSGNPFEC 33 (2740)
T ss_pred CCCCCcCCccChHHhccCC-CceEEEeeCCcccc
Confidence 6899999999999999998 99999999999874
No 92
>KOG1947|consensus
Probab=50.72 E-value=16 Score=32.70 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=26.7
Q ss_pred cccEEEcCCCC-CCccChhHHhh-ccccccEEEccCCC-CCccCh-hhhcCCCCCCEEeccCCC
Q psy10547 137 FIKNLQLSHCR-INSITPNAFRH-LEFTLKHLNLQEND-LEQVPV-ETLRHLKNLTLIDLSKNK 196 (269)
Q Consensus 137 ~L~~L~l~~n~-i~~~~~~~~~~-l~~~L~~L~l~~n~-l~~~~~-~~~~~l~~L~~L~l~~n~ 196 (269)
+++.+++++.. +++..-..+.. .+ +|++|.+.++. ++...- .....++.|+.|+++++.
T Consensus 244 ~L~~l~l~~~~~isd~~l~~l~~~c~-~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~ 306 (482)
T KOG1947|consen 244 KLKSLDLSGCGLVTDIGLSALASRCP-NLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCH 306 (482)
T ss_pred CcCccchhhhhccCchhHHHHHhhCC-CcceEccCCCCccchhHHHHHHHhcCcccEEeeecCc
Confidence 45555555554 44443333333 23 56666555444 332111 122334556666665543
No 93
>PF07473 Toxin_11: Spasmodic peptide gm9a; InterPro: IPR010012 This family consists of several spasmodic peptide gm9a sequences. Conotoxin gm9a is a putative 27-residue polypeptide encoded by Conus gloriamaris and is known to be a homologue of the 'spasmodic peptide', tx9a, isolated from the venom of the mollusk-hunting cone shell Conus textile []. Upon injection of this venom component, normal mice are converted into behavioural phenocopies of a well-known mutant, the spasmodic mouse [].; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 1IXT_A.
Probab=25.39 E-value=40 Score=17.14 Aligned_cols=11 Identities=36% Similarity=0.736 Sum_probs=8.1
Q ss_pred cccCCcceeec
Q psy10547 35 SELQSTCICSY 45 (269)
Q Consensus 35 ~~~~~~C~C~~ 45 (269)
+.||+.|.|-.
T Consensus 10 s~CashC~C~~ 20 (28)
T PF07473_consen 10 SKCASHCFCHP 20 (28)
T ss_dssp S-SSSSEEEET
T ss_pred ccCccceEEcc
Confidence 56778999975
No 94
>PF00299 Squash: Squash family serine protease inhibitor; InterPro: IPR000737 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The squash inhibitors form one of a number of serine proteinase inhibitor families. They belong to MEROPS inhibitor family I7, clan IE. They are generally annotated as either trypsin or elastase inhibitors (MEROPS peptidase family S1, IPR001254 from INTERPRO). The proteins, found exclusively in the seeds of the cucurbitaceae, e.g. Citrullus lanatus (watermelon), Cucumis sativus (cucumber), Momordica charantia (balsam pear), are approximately 30 residues in length and contain 6 Cys residues, which form 3 disulphide bonds []. The inhibitors function by being taken up by a serine protease (such as trypsin), which cleaves the peptide bond between Arg/Lys and Ile residues in the N-terminal portion of the protein [, ]. Structural studies have shown that the inhibitor has an ellipsoidal shape, and is largely composed of beta-turns []. The fold and Cys connectivity of the proteins resembles that of potato carboxypeptidase A inhibitor [].; GO: 0004867 serine-type endopeptidase inhibitor activity; PDB: 1MCT_I 2IT8_A 1HA9_A 1IB9_A 2C4B_B 2PO8_A 1F2S_I 1W7Z_H 2LET_A 2ETI_A ....
Probab=24.26 E-value=49 Score=17.06 Aligned_cols=11 Identities=36% Similarity=0.727 Sum_probs=9.3
Q ss_pred cccCCcceeec
Q psy10547 35 SELQSTCICSY 45 (269)
Q Consensus 35 ~~~~~~C~C~~ 45 (269)
++|...|.|..
T Consensus 14 sDCl~~C~C~~ 24 (29)
T PF00299_consen 14 SDCLAGCICLE 24 (29)
T ss_dssp GGSSTTEEEET
T ss_pred cCcccCCEEcc
Confidence 78899999974
No 95
>smart00286 PTI Plant trypsin inhibitors.
Probab=24.16 E-value=45 Score=17.19 Aligned_cols=11 Identities=36% Similarity=0.791 Sum_probs=9.0
Q ss_pred cccCCcceeec
Q psy10547 35 SELQSTCICSY 45 (269)
Q Consensus 35 ~~~~~~C~C~~ 45 (269)
++|...|.|..
T Consensus 14 sDCl~~CiC~~ 24 (29)
T smart00286 14 SDCMAECICLA 24 (29)
T ss_pred cCcccCCEEcc
Confidence 67889999964
No 96
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=23.61 E-value=63 Score=15.78 Aligned_cols=10 Identities=50% Similarity=0.491 Sum_probs=4.9
Q ss_pred CCCEEEcCCC
Q psy10547 210 NLVTLKLSDN 219 (269)
Q Consensus 210 ~L~~L~L~~n 219 (269)
+|+.|++++|
T Consensus 3 ~L~~L~l~~C 12 (26)
T smart00367 3 NLRELDLSGC 12 (26)
T ss_pred CCCEeCCCCC
Confidence 4455555444
No 97
>PF07127 Nodulin_late: Late nodulin protein; InterPro: IPR009810 This family consists of several plant specific late nodulin sequences which are homologous to the Pisum sativum (Garden pea) ENOD3 protein. ENOD3 is expressed in the late stages of root nodule formation and contains two pairs of cysteine residues toward the proteins C terminus which may be involved in metal-binding [].; GO: 0046872 metal ion binding, 0009878 nodule morphogenesis
Probab=23.52 E-value=1.7e+02 Score=17.48 Aligned_cols=6 Identities=17% Similarity=0.185 Sum_probs=3.7
Q ss_pred cccCCc
Q psy10547 35 SELQST 40 (269)
Q Consensus 35 ~~~~~~ 40 (269)
.+||..
T Consensus 34 ~DCp~~ 39 (54)
T PF07127_consen 34 SDCPKD 39 (54)
T ss_pred ccCCCC
Confidence 566666
No 98
>PF11466 Doppel: Prion-like protein Doppel; InterPro: IPR021566 Dpl is a homologue related to the prion protein (PrP). Dpl is toxic to neurons and is expressed in the brains of mice that do not express PrP. In DHPC and SDS micelles, Dpl shoes about 40% alpha-helical structure however in aqueous solution it consists of a random coil. The alpha helical segment can adopt a transmembrane localisation also in a membrane. The unprocessed Dpl protein is thought to posses a possible channel formation mechanism which may be related to toxicity through direct interaction with cell membranes and damage to the cell membrane. ; PDB: 1Z65_A.
Probab=23.29 E-value=1.3e+02 Score=15.71 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=13.2
Q ss_pred CCCCCCchHHHHHHHHHHHHh
Q psy10547 1 MTSHFSPFHLVTLILLTALIQ 21 (269)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~ 21 (269)
|.-|...+-+.++++++++=.
T Consensus 1 Mrk~Lg~~~lAi~c~LL~s~L 21 (30)
T PF11466_consen 1 MRKHLGGWWLAIVCVLLFSHL 21 (30)
T ss_dssp --SS-SSHHHHHHHHHHHHHT
T ss_pred CccchhhHHHHHHHHHHHHHh
Confidence 677778888888887776433
No 99
>PF08576 DUF1764: Eukaryotic protein of unknown function (DUF1764); InterPro: IPR013885 This entry consists of eukaryotic proteins of unknown function, including many hypothetical proteins.
Probab=23.03 E-value=44 Score=23.25 Aligned_cols=9 Identities=44% Similarity=1.435 Sum_probs=5.0
Q ss_pred cCCCCCCCC
Q psy10547 22 GGSAQCPWE 30 (269)
Q Consensus 22 ~~~~~cp~~ 30 (269)
+.+..||++
T Consensus 89 G~T~~CPFD 97 (102)
T PF08576_consen 89 GGTPLCPFD 97 (102)
T ss_pred CCCCCCCCc
Confidence 345566655
No 100
>cd00150 PlantTI Plant trypsin inhibitors such as squash trypsin inhibitor. Plant proteinase inhibitors play important roles in natural plant defense. Proteinase inhibitors from squash seeds form an uniform family of small proteins cross-linked with three disulfide bridges.
Probab=21.58 E-value=55 Score=16.58 Aligned_cols=11 Identities=36% Similarity=0.757 Sum_probs=8.9
Q ss_pred cccCCcceeec
Q psy10547 35 SELQSTCICSY 45 (269)
Q Consensus 35 ~~~~~~C~C~~ 45 (269)
++|...|.|..
T Consensus 12 sDCl~~CiC~~ 22 (27)
T cd00150 12 SDCLAECICLE 22 (27)
T ss_pred ccccCCCEEcc
Confidence 67888999964
Done!