Your job contains 1 sequence.
>psy10547
MTSHFSPFHLVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTN
YPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR
HLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET
LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY
KNSFRGLELSLKNLNLKNTKLKSVTPYWR
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10547
(269 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261509 - symbol:haf "hattifattener" species:7227 ... 273 2.5e-22 1
UNIPROTKB|Q86UN3 - symbol:RTN4RL2 "Reticulon-4 receptor-l... 191 2.1e-14 1
RGD|727797 - symbol:Rtn4rl2 "reticulon 4 receptor-like 2"... 186 7.2e-14 1
MGI|MGI:2669796 - symbol:Rtn4rl2 "reticulon 4 receptor-li... 186 7.2e-14 1
MGI|MGI:1341817 - symbol:Lgr5 "leucine rich repeat contai... 191 8.3e-14 1
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 189 1.3e-13 1
ZFIN|ZDB-GENE-041008-23 - symbol:fmoda "fibromodulin a" s... 183 3.3e-13 1
UNIPROTKB|F1NXL1 - symbol:RTN4RL2 "Uncharacterized protei... 182 4.1e-13 1
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 185 7.2e-13 1
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 183 7.9e-13 1
WB|WBGene00003915 - symbol:pan-1 species:6239 "Caenorhabd... 180 5.9e-12 1
UNIPROTKB|O75473 - symbol:LGR5 "Leucine-rich repeat-conta... 179 1.6e-11 1
MGI|MGI:2136886 - symbol:Rtn4r "reticulon 4 receptor" spe... 176 1.6e-11 1
RGD|620810 - symbol:Rtn4r "reticulon 4 receptor" species:... 174 3.2e-11 1
UNIPROTKB|I3LT51 - symbol:LGR5 "Uncharacterized protein" ... 155 3.5e-11 1
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 175 3.6e-11 1
UNIPROTKB|E1C2F8 - symbol:LGR5 "Uncharacterized protein" ... 176 4.1e-11 1
UNIPROTKB|F1NRZ3 - symbol:RTN4R "Uncharacterized protein"... 171 8.8e-11 1
UNIPROTKB|H3BQ49 - symbol:LINGO1 "Leucine-rich repeat and... 151 1.1e-10 1
FB|FBgn0004364 - symbol:18w "18 wheeler" species:7227 "Dr... 175 1.1e-10 1
UNIPROTKB|Q9BZR6 - symbol:RTN4R "Reticulon-4 receptor" sp... 170 1.1e-10 1
UNIPROTKB|Q7Z2Q7 - symbol:LRRC70 "Leucine-rich repeat-con... 171 1.4e-10 1
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 169 2.2e-10 1
WB|WBGene00008093 - symbol:lron-1 species:6239 "Caenorhab... 169 2.4e-10 1
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 169 2.4e-10 1
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 171 2.5e-10 1
UNIPROTKB|G3X6G8 - symbol:LGR6 "Uncharacterized protein" ... 170 3.4e-10 1
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 168 3.4e-10 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 168 3.4e-10 1
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 168 3.4e-10 1
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 168 3.4e-10 1
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 168 3.4e-10 1
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 170 3.8e-10 1
UNIPROTKB|F1RHM5 - symbol:RTN4R "Uncharacterized protein"... 166 3.8e-10 1
MGI|MGI:2389177 - symbol:Lrrtm3 "leucine rich repeat tran... 166 5.5e-10 1
RGD|1304866 - symbol:Lrrtm3 "leucine rich repeat transmem... 166 5.5e-10 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 166 5.8e-10 1
RGD|628615 - symbol:Lgr4 "leucine-rich repeat-containing ... 168 6.3e-10 1
UNIPROTKB|Q9Z2H4 - symbol:Lgr4 "Leucine-rich repeat-conta... 168 6.3e-10 1
UNIPROTKB|F1SGM5 - symbol:LGR4 "Uncharacterized protein" ... 167 7.6e-10 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 127 8.9e-10 2
UNIPROTKB|F1MUR6 - symbol:RTN4RL2 "Uncharacterized protei... 162 9.8e-10 1
UNIPROTKB|Q86VH5 - symbol:LRRTM3 "Leucine-rich repeat tra... 164 9.9e-10 1
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 164 1.9e-09 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 162 1.9e-09 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 162 1.9e-09 1
ZFIN|ZDB-GENE-080327-16 - symbol:lingo1a "leucine rich re... 161 2.6e-09 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 163 2.8e-09 1
UNIPROTKB|F1MG02 - symbol:ECM2 "Extracellular matrix prot... 161 3.0e-09 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 160 3.2e-09 1
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 160 3.4e-09 1
RGD|1560339 - symbol:Lgr6 "leucine-rich repeat-containing... 162 3.7e-09 1
UNIPROTKB|F1NEL3 - symbol:LGR4 "Uncharacterized protein" ... 162 4.1e-09 1
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 158 4.3e-09 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 162 4.3e-09 1
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 159 4.5e-09 1
UNIPROTKB|F1Q3G2 - symbol:SLIT3 "Uncharacterized protein"... 121 5.4e-09 2
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 126 5.5e-09 2
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 158 5.5e-09 1
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 161 5.7e-09 1
ZFIN|ZDB-GENE-040912-136 - symbol:lingo1b "leucine rich r... 158 6.2e-09 1
UNIPROTKB|E2RGS8 - symbol:LGR6 "Uncharacterized protein" ... 159 8.7e-09 1
UNIPROTKB|E7EW58 - symbol:LRRN3 "Leucine-rich repeat neur... 150 9.5e-09 1
UNIPROTKB|G5E9B3 - symbol:LGR4 "Leucine-rich repeat-conta... 158 1.1e-08 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 129 1.2e-08 2
UNIPROTKB|F1NJ43 - symbol:NYX "Uncharacterized protein" s... 154 1.2e-08 1
FB|FBgn0005775 - symbol:Con "Connectin" species:7227 "Dro... 146 1.4e-08 2
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 118 1.7e-08 2
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 118 1.7e-08 2
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 155 1.8e-08 1
WB|WBGene00002282 - symbol:let-4 species:6239 "Caenorhabd... 155 2.0e-08 1
MGI|MGI:3045213 - symbol:Tlr13 "toll-like receptor 13" sp... 156 2.1e-08 1
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 153 2.2e-08 1
UNIPROTKB|F1NL15 - symbol:SLIT3 "Uncharacterized protein"... 108 2.2e-08 2
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 156 2.2e-08 1
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 157 2.5e-08 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 124 2.8e-08 2
FB|FBgn0243486 - symbol:rdo "reduced ocelli" species:7227... 153 3.2e-08 1
UNIPROTKB|Q6UXK2 - symbol:ISLR2 "Immunoglobulin superfami... 153 3.3e-08 1
UNIPROTKB|F1NF14 - symbol:SLIT3 "Uncharacterized protein"... 126 3.4e-08 2
UNIPROTKB|Q9HBX8 - symbol:LGR6 "Leucine-rich repeat-conta... 154 3.5e-08 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 122 3.6e-08 2
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 122 3.6e-08 2
WB|WBGene00006366 - symbol:sym-1 species:6239 "Caenorhabd... 152 3.8e-08 1
UNIPROTKB|Q3MHH9 - symbol:ECM2 "Extracellular matrix prot... 152 3.8e-08 1
FB|FBgn0000313 - symbol:chp "chaoptic" species:7227 "Dros... 155 3.9e-08 1
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 151 4.1e-08 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 154 4.1e-08 1
RGD|1308668 - symbol:Lingo1 "leucine rich repeat and Ig d... 150 4.3e-08 1
MGI|MGI:2441805 - symbol:Lgr6 "leucine-rich repeat-contai... 153 4.6e-08 1
UNIPROTKB|G3MXX5 - symbol:RTN4R "Uncharacterized protein"... 149 5.0e-08 1
UNIPROTKB|F1NG27 - symbol:TLR3 "Uncharacterized protein" ... 152 5.5e-08 1
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 150 5.5e-08 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 150 5.5e-08 1
RGD|1308170 - symbol:Cd180 "CD180 molecule" species:10116... 150 6.3e-08 1
ZFIN|ZDB-GENE-061026-3 - symbol:nyx "nyctalopin" species:... 148 6.4e-08 1
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 149 6.8e-08 1
TAIR|locus:2825384 - symbol:RLP12 "AT1G71400" species:370... 151 6.8e-08 1
UNIPROTKB|Q9H3W5 - symbol:LRRN3 "Leucine-rich repeat neur... 150 7.0e-08 1
ZFIN|ZDB-GENE-080723-57 - symbol:lingo2 "leucine rich rep... 149 7.4e-08 1
WARNING: Descriptions of 457 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0261509 [details] [associations]
symbol:haf "hattifattener" species:7227 "Drosophila
melanogaster" [GO:0008045 "motor neuron axon guidance"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0008045
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 RefSeq:NP_608607.1
UniGene:Dm.18437 ProteinModelPortal:Q9VQ25 SMR:Q9VQ25
MINT:MINT-770476 PRIDE:Q9VQ25 EnsemblMetazoa:FBtr0077875
GeneID:33339 KEGG:dme:Dmel_CG14351 UCSC:CG14351-RA CTD:33339
FlyBase:FBgn0261509 InParanoid:Q9VQ25 OMA:QECIIVC OrthoDB:EOG4PC871
GenomeRNAi:33339 NextBio:783103 ArrayExpress:Q9VQ25 Bgee:Q9VQ25
Uniprot:Q9VQ25
Length = 1316
Score = 273 (101.2 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 82/257 (31%), Positives = 129/257 (50%)
Query: 7 PFHLVTLILLTALIQG----GSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYP 62
P L+LL LI G AQCPW+ + +LQ++CIC+YN ELS+QC D ++
Sbjct: 11 PAATTPLLLLLPLILGRLHVAHAQCPWQRDVP-DLQTSCICAYNLGRELSVQC-DQVDFS 68
Query: 63 LFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL 122
A +N H K P+DLLY+NNS I + + F+ + + NLQLS C I I AF+
Sbjct: 69 QLLAAMNTHARLK-PVDLLYVNNSTISELPDAVFSNLSLHNLQLSSCGIQRIATGAFKGQ 127
Query: 123 DAI-RNIN--ENTFNGIFIKNLQ-LSHCRINSITPNAFRHLE---FT----LKHLNLQEN 171
+++ RN+N +N + ++ L+ L + ++ N H+ F L L L +N
Sbjct: 128 ESVLRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDN 187
Query: 172 DLEQVPVETLRHLK-NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNS--- 227
++ + R L+ +L ++L K K+P+ S L +L L LS N + +
Sbjct: 188 NVT-LASNAFRGLEQSLKNLNLKGTKQRKVPE-SIRGLKSLAFLDLSQNGIKELPGAGGI 245
Query: 228 --FRGLELNNNLTLYKN 242
F GL+ L L +N
Sbjct: 246 RVFDGLDALTALNLERN 262
Score = 214 (80.4 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 53/106 (50%), Positives = 70/106 (66%)
Query: 125 IRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
I + + F+ + + NLQLS C I I AF+ E L++LNLQ+N L VPVE L+ L
Sbjct: 93 ISELPDAVFSNLSLHNLQLSSCGIQRIATGAFKGQESVLRNLNLQDNLLADVPVEALKVL 152
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSF 244
L L+DLSKN++ IPDD+F L L TLKL+DNN+TL N+FRG
Sbjct: 153 GKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVTLASNAFRG-------------- 198
Query: 245 RG 246
Sbjct: 198 -- 198
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 191 (72.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 63/216 (29%), Positives = 107/216 (49%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF 100
C C Y++ +S Q N+ ++ PL + L++ N+ IR + TF G
Sbjct: 35 CTC-YSSPPTVSCQANNFSSVPLSLPPSTQR---------LFLQNNLIRTLRPGTF-GSN 83
Query: 101 IKNLQLSHCRINSITPNAFRHLDAI-----------RNINENTFNGIF-IKNLQLSHCRI 148
+ L L +++I P FRHL A+ R++ +TF G+ +++L L C++
Sbjct: 84 LLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQL 143
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+S+ N FR L +L++L LQEN L + + L NL+ + L N++ + + F L
Sbjct: 144 SSLPGNIFRGL-VSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 209 NNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+L L L N L +++ +FRGL L L+ NS
Sbjct: 203 GSLDRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNS 238
Score = 157 (60.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 60/199 (30%), Positives = 91/199 (45%)
Query: 55 CNDLTNYPLFKATLNKHVNTKVPLDL------LYINNSAIRNINENTFNGIFIKNLQLSH 108
C ++ P N + VPL L L++ N+ IR + TF G + L L
Sbjct: 35 CTCYSSPPTVSCQANNF--SSVPLSLPPSTQRLFLQNNLIRTLRPGTF-GSNLLTLWLFS 91
Query: 109 CRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNL 168
+++I P FRHL A+ ++ N H R S+ P+ F+ LE L+ L+L
Sbjct: 92 NNLSTIYPGTFRHLQALEELDLGD-------N---RHLR--SLEPDTFQGLE-RLQSLHL 138
Query: 169 QENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNS 227
L +P R L +L + L +N + + DD F+ L NL L L N L L ++
Sbjct: 139 YRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHV 198
Query: 228 FRGLELNNNLTLYKNSFRG 246
FRGL + L L+ N +G
Sbjct: 199 FRGLGSLDRLLLHGNRLQG 217
Score = 141 (54.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 49/176 (27%), Positives = 90/176 (51%)
Query: 56 NDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSI 114
N+L+ ++ T +H+ LDL +N +R++ +TF G+ +++L L C+++S+
Sbjct: 92 NNLST--IYPGTF-RHLQALEELDLG--DNRHLRSLEPDTFQGLERLQSLHLYRCQLSSL 146
Query: 115 TPNAFRHLDAIRNI--NENTF----NGIFIKNLQLSHC-----RINSITPNAFRHLEFTL 163
N FR L +++ + EN+ + +F LSH R+ +T + FR L +L
Sbjct: 147 PGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG-SL 205
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L L N L+ V R L LT++ L N + +P ++ + L +L L+L+ N
Sbjct: 206 DRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 261
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 186 (70.5 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 62/216 (28%), Positives = 107/216 (49%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF 100
C C Y++ +S Q N+ ++ PL + L++ N+ IR++ TF G
Sbjct: 35 CTC-YSSPPTVSCQANNFSSVPLSLPPSTQR---------LFLQNNLIRSLRPGTF-GPN 83
Query: 101 IKNLQLSHCRINSITPNAFRHLDAI-----------RNINENTFNGIF-IKNLQLSHCRI 148
+ L L +++I P FRHL A+ R++ +TF G+ +++L L C++
Sbjct: 84 LLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQL 143
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+S+ N FR L +L++L LQEN L + + L NL+ + L N++ + + F L
Sbjct: 144 SSLPGNIFRGL-VSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 209 NNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+L L L N L +++ +F GL L L+ NS
Sbjct: 203 GSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNS 238
Score = 157 (60.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 60/199 (30%), Positives = 92/199 (46%)
Query: 55 CNDLTNYPLFKATLNKHVNTKVPLDL------LYINNSAIRNINENTFNGIFIKNLQLSH 108
C ++ P N + VPL L L++ N+ IR++ TF G + L L
Sbjct: 35 CTCYSSPPTVSCQANNF--SSVPLSLPPSTQRLFLQNNLIRSLRPGTF-GPNLLTLWLFS 91
Query: 109 CRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNL 168
+++I P FRHL A+ ++ N H R S+ P+ F+ LE L+ L+L
Sbjct: 92 NNLSTIYPGTFRHLQALEELDLGD-------N---RHLR--SLEPDTFQGLE-RLQSLHL 138
Query: 169 QENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNS 227
L +P R L +L + L +N + + DD F+ L NL L L N L L ++
Sbjct: 139 YRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHV 198
Query: 228 FRGLELNNNLTLYKNSFRG 246
FRGL + L L+ N +G
Sbjct: 199 FRGLGSLDRLLLHGNRLQG 217
Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 48/176 (27%), Positives = 88/176 (50%)
Query: 56 NDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSI 114
N+L+ ++ T +H+ LDL +N +R++ +TF G+ +++L L C+++S+
Sbjct: 92 NNLST--IYPGTF-RHLQALEELDLG--DNRHLRSLEPDTFQGLERLQSLHLYRCQLSSL 146
Query: 115 TPNAFRHLDAIRNI--NENTF----NGIFIKNLQLSHC-----RINSITPNAFRHLEFTL 163
N FR L +++ + EN+ + +F LSH R+ +T + FR L +L
Sbjct: 147 PGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG-SL 205
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L L N L+ V L LT++ L N + +P ++ + L L L+L+ N
Sbjct: 206 DRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 186 (70.5 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 62/216 (28%), Positives = 107/216 (49%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF 100
C C Y++ +S Q N+ ++ PL + L++ N+ IR++ TF G
Sbjct: 35 CTC-YSSPPTVSCQANNFSSVPLSLPPSTQR---------LFLQNNLIRSLRPGTF-GPN 83
Query: 101 IKNLQLSHCRINSITPNAFRHLDAI-----------RNINENTFNGIF-IKNLQLSHCRI 148
+ L L +++I P FRHL A+ R++ +TF G+ +++L L C++
Sbjct: 84 LLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQL 143
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+S+ N FR L +L++L LQEN L + + L NL+ + L N++ + + F L
Sbjct: 144 SSLPGNIFRGL-VSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 209 NNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+L L L N L +++ +F GL L L+ NS
Sbjct: 203 GSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNS 238
Score = 157 (60.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 60/199 (30%), Positives = 92/199 (46%)
Query: 55 CNDLTNYPLFKATLNKHVNTKVPLDL------LYINNSAIRNINENTFNGIFIKNLQLSH 108
C ++ P N + VPL L L++ N+ IR++ TF G + L L
Sbjct: 35 CTCYSSPPTVSCQANNF--SSVPLSLPPSTQRLFLQNNLIRSLRPGTF-GPNLLTLWLFS 91
Query: 109 CRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNL 168
+++I P FRHL A+ ++ N H R S+ P+ F+ LE L+ L+L
Sbjct: 92 NNLSTIHPGTFRHLQALEELDLGD-------N---RHLR--SLEPDTFQGLE-RLQSLHL 138
Query: 169 QENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNS 227
L +P R L +L + L +N + + DD F+ L NL L L N L L ++
Sbjct: 139 YRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHV 198
Query: 228 FRGLELNNNLTLYKNSFRG 246
FRGL + L L+ N +G
Sbjct: 199 FRGLGSLDRLLLHGNRLQG 217
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 45/162 (27%), Positives = 81/162 (50%)
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI 128
+H+ LDL +N +R++ +TF G+ +++L L C+++S+ N FR L +++ +
Sbjct: 103 RHLQALEELDLG--DNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYL 160
Query: 129 --NENTF----NGIFIKNLQLSHC-----RINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
EN+ + +F LSH R+ +T + FR L +L L L N L+ V
Sbjct: 161 YLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG-SLDRLLLHGNRLQGVH 219
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L LT++ L N + +P ++ + L L L+L+ N
Sbjct: 220 RAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 191 (72.3 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 71/253 (28%), Positives = 122/253 (48%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDL------TNYPL 63
L++L+ L L+ GS+ P D S C C + L + C+DL +N +
Sbjct: 9 LLSLLALLQLVAAGSS--PGPDAIPRGCPSHCHCELDGRMLLRVDCSDLGLSELPSNLSV 66
Query: 64 FKATLNKHVN--TKVPLDLLY---------INNSAIRNINENTFNGIF-IKNLQLSHCRI 111
F + L+ +N +++P LL+ + +A+ +I + F G+ +K L L + ++
Sbjct: 67 FTSYLDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQL 126
Query: 112 NSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ A ++L +++++ L +H I+ + P+ F L +L+HL L +N
Sbjct: 127 RQVPEEALQNLRSLQSLR-----------LDANH--ISYVPPSCFSGLH-SLRHLWLDDN 172
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRG 230
L VPV+ R L L + L+ NKI I D +F L++LV L L +N + +L K F G
Sbjct: 173 ALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDG 232
Query: 231 LELNNNLTL-YKN 242
L L L Y N
Sbjct: 233 LHSLETLDLNYNN 245
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 40/180 (22%), Positives = 85/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L+ L + +A+ +I + F G+ +K L L + ++ + A ++L +++++
Sbjct: 92 LEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHIS 151
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ F+G+ +++L L + + AFR L L+ + L N + + +L
Sbjct: 152 YVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLS-ALQAMTLALNKIHHIADYAFGNLS 210
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+L ++ L N+I + F L++L TL L+ NNL + + + L L + N+ R
Sbjct: 211 SLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIR 270
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 61/218 (27%), Positives = 101/218 (46%)
Query: 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF 96
L C ++ L + N+L +P TL+ N K +L + +N+ IR+I E F
Sbjct: 225 LGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLS---NLK---ELGFHSNN-IRSIPERAF 277
Query: 97 NGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI--F--------IKNLQLSH 145
G + + I + +AF+HL +R + N + I F +++L L+
Sbjct: 278 VGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLTLTG 337
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
+I+S+ P A L+ L+L N LE +P +L + L IDL N+I +I +F
Sbjct: 338 AKISSL-PQAVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDLRHNEIYEIKGSTF 394
Query: 206 STLNNLVTLKLSDNNLTL-YKNSFRGLELNNNLTLYKN 242
L NL +L L+ N + + + N+F L L L N
Sbjct: 395 QQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN 432
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 189 (71.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 71/253 (28%), Positives = 121/253 (47%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDL------TNYPL 63
L++L+ L L+ GS P D S C C + L + C+DL +N +
Sbjct: 9 LLSLLALLQLVAAGSPPRP--DTMPRGCPSYCHCELDGRMLLRVDCSDLGLSELPSNLSV 66
Query: 64 FKATLNKHVN--TKVPLDLLY---------INNSAIRNINENTFNGIF-IKNLQLSHCRI 111
F + L+ +N +++P LL+ + +A+ +I + F G+ +K L L + ++
Sbjct: 67 FTSYLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQL 126
Query: 112 NSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ A ++L +++++ L +H I+ + P+ F L +L+HL L +N
Sbjct: 127 RQVPEEALQNLRSLQSLR-----------LDANH--ISYVPPSCFSGLH-SLRHLWLDDN 172
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRG 230
L VPV+ R L L + L+ NKI I D +F L++LV L L +N + +L K F G
Sbjct: 173 ALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDG 232
Query: 231 LELNNNLTL-YKN 242
L L L Y N
Sbjct: 233 LHSLETLDLNYNN 245
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 40/180 (22%), Positives = 85/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L+ L + +A+ +I + F G+ +K L L + ++ + A ++L +++++
Sbjct: 92 LEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHIS 151
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ F+G+ +++L L + + AFR L L+ + L N + + +L
Sbjct: 152 YVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLS-ALQAMTLALNKIHHIADHAFGNLS 210
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+L ++ L N+I + F L++L TL L+ NNL + + + L L + N+ R
Sbjct: 211 SLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIR 270
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 60/218 (27%), Positives = 100/218 (45%)
Query: 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF 96
L C ++ L + N+L +P TL+ N K +L + +N+ IR+I E F
Sbjct: 225 LGKKCFDGLHSLETLDLNYNNLDEFPTAIKTLS---NLK---ELGFHSNN-IRSIPERAF 277
Query: 97 NGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI--F--------IKNLQLSH 145
G + + I + +AF+HL +R + N + I F +++L L+
Sbjct: 278 VGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEFPDLTGTATLESLTLTG 337
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
+I+S+ L L+ L+L N LE +P +L + L IDL N+I +I +F
Sbjct: 338 AKISSLPQTVCDQLP-NLQVLDLSYNLLEDLP--SLSGCQKLQKIDLRHNEIYEIKGGTF 394
Query: 206 STLNNLVTLKLSDNNLTL-YKNSFRGLELNNNLTLYKN 242
L NL +L L+ N + + + N+F L L L N
Sbjct: 395 QQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSN 432
>ZFIN|ZDB-GENE-041008-23 [details] [associations]
symbol:fmoda "fibromodulin a" species:7955 "Danio
rerio" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
ZFIN:ZDB-GENE-041008-23 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000234447
HOVERGEN:HBG108061 PANTHER:PTHR24371:SF11 EMBL:BC096939
IPI:IPI00487287 RefSeq:NP_001025243.1 UniGene:Dr.133900
ProteinModelPortal:Q4V9E0 STRING:Q4V9E0 GeneID:791822
KEGG:dre:791822 CTD:791822 InParanoid:Q4V9E0 NextBio:20930800
Uniprot:Q4V9E0
Length = 342
Score = 183 (69.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 59/217 (27%), Positives = 110/217 (50%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQS-TCICSYNTANELSIQCNDLTNYPLFKATL 68
L+ L+LL L++ AQ P++ S + + + NT E +C+ +P+
Sbjct: 3 LIALLLL-GLMEVSLAQDPFQWLSSLHSRGYASLQADNTGGECPEECDCPPTFPIAMYCD 61
Query: 69 NKHVNTKVP-----LDLLYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHL 122
N+++ K+P + +Y+ ++ I ++ +N F N + + L INS+ AF L
Sbjct: 62 NRNIQ-KMPYIPSRMKYVYLQHNQITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKL 120
Query: 123 DAIRNI--NENTFNGI------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLE 174
+ + N N + +++L+L+H +I + PNAF +E L L L N L+
Sbjct: 121 SNLNRLYLNNNNLTEVPSNLPRSLRDLRLNHNKIGKLAPNAFEGME-NLTILLLHHNSLQ 179
Query: 175 QVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNL 211
+ V L+ LK+LTL+D+S+N++ K+P+ L+ L
Sbjct: 180 DIGVG-LKGLKSLTLLDVSRNQLKKVPESLPEMLHQL 215
Score = 122 (48.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I ++ +N F N + + L INS+ AF L L L L N+L +VP R
Sbjct: 85 ITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKLS-NLNRLYLNNNNLTEVPSNLPRS 143
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
L++L L + NKIGK+ ++F + NL L L N+L +GL+ L + +N
Sbjct: 144 LRDLRL---NHNKIGKLAPNAFEGMENLTILLLHHNSLQDIGVGLKGLKSLTLLDVSRNQ 200
Query: 244 FR 245
+
Sbjct: 201 LK 202
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 163 LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
+K++ LQ N + VP + NL + L +N I + +F+ L+NL L L++NNLT
Sbjct: 75 MKYVYLQHNQITSVPDNAFGNATNLVWVMLHENHINSVGKQAFAKLSNLNRLYLNNNNLT 134
Query: 223 -LYKN---SFRGLELNNNLT--LYKNSFRG 246
+ N S R L LN+N L N+F G
Sbjct: 135 EVPSNLPRSLRDLRLNHNKIGKLAPNAFEG 164
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 182 (69.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 75/247 (30%), Positives = 117/247 (47%)
Query: 14 ILLTAL--IQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKH 71
+LL AL + GGS CP + C C Y + +S Q N+ ++ P
Sbjct: 11 LLLAALAWVPGGSPACP----------ALCTC-YVSPPTVSCQANNFSSVP--------- 50
Query: 72 VNTKVPLDL--LYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN 129
T +P L++ N+ IR + TF G L L I+SI P FRHL A+ ++
Sbjct: 51 --TGLPPGARRLFLQNNVIRALRAGTF-GPSTVTLWLYSNNISSIQPGTFRHLPALEELD 107
Query: 130 --EN---------TFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
+N TF+G+ ++ L L C++ S+ FR L +L++L LQEN L +
Sbjct: 108 LGDNPHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLH-SLQYLYLQENGLLYLQ 166
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNN 236
+ L NL+ + L N++ + + F L +L L L N L T+++ +FRGL
Sbjct: 167 DDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAFRGLARLTI 226
Query: 237 LTLYKNS 243
L L+ NS
Sbjct: 227 LYLFNNS 233
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 67/233 (28%), Positives = 100/233 (42%)
Query: 25 AQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDL--LY 82
A W + C C Y + +S Q N+ ++ P T +P L+
Sbjct: 14 AALAWVPGGSPACPALCTC-YVSPPTVSCQANNFSSVP-----------TGLPPGARRLF 61
Query: 83 INNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQ 142
+ N+ IR + TF G L L I+SI P FRHL A+ ++ N
Sbjct: 62 LQNNVIRALRAGTF-GPSTVTLWLYSNNISSIQPGTFRHLPALEELDLGD-------N-- 111
Query: 143 LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD 202
H R+ + P+ F L L+ L+L L +P R L +L + L +N + + D
Sbjct: 112 -PHLRV--LAPDTFHGLR-RLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQD 167
Query: 203 DSFSTLNNLVTLKLSDNNL-TLYKNSFRGL-ELN------NNL-TLYKNSFRG 246
D F+ L NL L L N L L + FRGL L+ N L T+++ +FRG
Sbjct: 168 DLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAFRG 220
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI 128
+H+ LDL +N +R + +TF+G+ ++ L L C++ S+ FR L +++ +
Sbjct: 98 RHLPALEELDLG--DNPHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYL 155
Query: 129 --NENTF----NGIFIKNLQLSHC-----RINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
EN + +F LSH R+ +++ FR L +L L L N L V
Sbjct: 156 YLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLP-SLDRLLLHANRLATVH 214
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
R L LT++ L N + +P D + L L L+L+ N
Sbjct: 215 RRAFRGLARLTILYLFNNSLAALPGDPLAALPALQFLRLNAN 256
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 185 (70.2 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 72/253 (28%), Positives = 124/253 (49%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDL------TNYPL 63
L++L +L L GG + P + C C + L + C+DL +N +
Sbjct: 9 LLSLPVLLQLAAGGGSPRP--GTLLRGCPAHCQCEPDGRMLLRVDCSDLGLSELPSNLSV 66
Query: 64 FKATLNKHVN--TKVP---------LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRI 111
F + L+ +N +++P L+ L + +A+ I + F G++ +K L L + +
Sbjct: 67 FTSYLDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHL 126
Query: 112 NSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ P +A++N+ +++L+L RI+S+ P+ F L +L+HL L +N
Sbjct: 127 RQV-PT-----EALQNLRS-------LQSLRLDANRISSVPPSCFSGLH-SLRHLWLDDN 172
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRG 230
L ++PV+ R L L + L+ NKI IPD +F L++LV L L +N + +L K F G
Sbjct: 173 ALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDG 232
Query: 231 LELNNNLTL-YKN 242
L L L Y N
Sbjct: 233 LHSLETLDLNYNN 245
Score = 134 (52.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 58/244 (23%), Positives = 110/244 (45%)
Query: 19 LIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNY-PLFKATLNKHVNTKVP 77
L++G A C E + L+ C S +EL + T+Y L +++ + +
Sbjct: 30 LLRGCPAHCQCEPDGRMLLRVDC--SDLGLSELPSNLSVFTSYLDLSMNNISQLPPSPLH 87
Query: 78 ----LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL--------DA 124
L+ L + +A+ I + F G++ +K L L + + + A ++L DA
Sbjct: 88 SLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDA 147
Query: 125 --IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I ++ + F+G+ +++L L + I AFR L L+ + L N + +P
Sbjct: 148 NRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLS-ALQAMTLALNKIHHIPDYAF 206
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYK 241
+L +L ++ L N+I + F L++L TL L+ NNL + + R L L +
Sbjct: 207 GNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAVRTLSNLKELGFHS 266
Query: 242 NSFR 245
N+ +
Sbjct: 267 NNIK 270
Score = 125 (49.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDA----------IR 126
L L ++ + I ++ + F+G+ +++L L + I AFR L A I
Sbjct: 140 LQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH 199
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+I + F + + L L + RI+S+ F L +L+ L+L N+L++ P +R L
Sbjct: 200 HIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH-SLETLDLNYNNLDEFPT-AVRTLS 257
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNSFRGLELNNNLTL 239
NL + N I IP+ +F +L+T+ DN + L +++F+ L LTL
Sbjct: 258 NLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTL 312
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 183 (69.5 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 61/181 (33%), Positives = 91/181 (50%)
Query: 78 LDL--LYINNSAIRNINENTFN--GIFIKNLQLSHCRINSITPNAFRHLD--AIRNINEN 131
LD+ L I+NS++ I EN + G + L +S ++ ++ A +HL I N+N N
Sbjct: 104 LDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHN 163
Query: 132 --------TFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLR 182
F G+ ++ L L +I I P AFR LE +K LNL NDL +P + L
Sbjct: 164 KITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALS 223
Query: 183 HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYK 241
L L +++ +NKI I + F L +L +L L+ N +T N F L L N+L L
Sbjct: 224 ILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEG 283
Query: 242 N 242
N
Sbjct: 284 N 284
Score = 172 (65.6 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 56/185 (30%), Positives = 93/185 (50%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHC 109
L++ NDLTN P K ++ L L I + IR I+E F G+ + +L L+H
Sbjct: 207 LNLGGNDLTNIP------QKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHN 260
Query: 110 RINSITPNAFRHLDAIRN----------INENTFNGIF--IKNLQLSHCRINSITPNAFR 157
I ++ N F HL + + I+++ F G+ ++ L+L +I++I A R
Sbjct: 261 MITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALR 320
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHL-KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216
L L+HL+L+ N++ + + +LT ++L KN I +P F LN+L TL L
Sbjct: 321 PLH-RLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNL 379
Query: 217 SDNNL 221
+N L
Sbjct: 380 QNNKL 384
Score = 165 (63.1 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L I + IR I+E F G+ + +L L+H I ++ N F HL
Sbjct: 228 LKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLT------------- 274
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
+ +L+L +I+ I +AF+ LE L++L L +N + +P E LR L L +DL N
Sbjct: 275 LLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNN 334
Query: 197 IGKIPDDSFSTLNNLVT-LKLSDNNLT-----LYKN--SFRGLELNNN 236
I + +D+F+ + +T L L N++ L++N S L L NN
Sbjct: 335 INVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNN 382
Score = 145 (56.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 80 LLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFI 138
+L +N++ I I+ N F G+ ++ L L +I I P AFR L+ I
Sbjct: 157 ILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLED------------HI 204
Query: 139 KNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIG 198
K L L + +I A L TLK L +QEN + + L++L + L+ N I
Sbjct: 205 KRLNLGGNDLTNIPQKALSILS-TLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMIT 263
Query: 199 KIPDDSFSTLNNLVTLKLSDNNLTLY-KNSFRGLELN 234
+P + FS L L +L+L N +++ K++F+GLE N
Sbjct: 264 TVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEEN 300
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/101 (32%), Positives = 58/101 (57%)
Query: 133 FNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDL 192
F + I++L + + + +I NA L L L++ N ++ VP + L+HL +L +++L
Sbjct: 101 FLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNL 160
Query: 193 SKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLE 232
+ NKI I +++F L L L L +N +T + +FRGLE
Sbjct: 161 NHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLE 201
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 42/158 (26%), Positives = 80/158 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKN-LQLSHCRINSITPNAFRHLDA---IRNINENTF 133
LD L + ++ I + N F+ + + N L+L +I+ I +AF+ L+ + +N
Sbjct: 252 LDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQI 311
Query: 134 NGI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
+ I +++L L + IN + +AF +L LNLQ+ND++ +P +L
Sbjct: 312 HTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENL 371
Query: 185 KNLTLIDLSKNKIGKIPDDSFS-TLNNLVTLKLSDNNL 221
+L ++L NK+ +IP D ++ L + ++DN L
Sbjct: 372 NSLETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDNPL 409
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 180 (68.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 57/211 (27%), Positives = 104/211 (49%)
Query: 29 WEDESESELQSTCICS----YNTANELSIQCNDLTNYPLFK--ATLNKHVNTKVPLDLLY 82
+++E + Q CIC+ ++T +I+C + + + A+LN T+ L L
Sbjct: 31 FKEEFNAHKQPVCICADNGIFSTVKGFTIECESASIASVSENLASLN---GTE--LGRLT 85
Query: 83 INNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL-----------DAIRNINEN 131
I +S + + ++ F +F K ++L C ++++ PN+F+ L + I+ + +
Sbjct: 86 IRDSTVNVLPQDLFENVFAKQVKLERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKG 145
Query: 132 TFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLI 190
F G+ +K L L+ +I I AF L+ ++ L L END+ + T +KNL +
Sbjct: 146 LFTGLKSLKTLDLAMNKIQEIDVGAFEELK-KVEELLLNENDIRVLKTGTFDGMKNLKKL 204
Query: 191 DLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
L + I +F LN+L L LS+NNL
Sbjct: 205 TLQNCNLEIIQKGAFRGLNSLEQLILSNNNL 235
Score = 168 (64.2 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 51/160 (31%), Positives = 79/160 (49%)
Query: 79 DLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NEN---- 131
+LL + + I+ + + F G+ +K L L+ +I I AF L + + NEN
Sbjct: 130 ELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRV 189
Query: 132 ----TFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
TF+G+ +K L L +C + I AFR L +L+ L L N+LE + LKN
Sbjct: 190 LKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLN-SLEQLILSNNNLENIDWTIFSALKN 248
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN 226
L ++DL NKI + SF L LV L++N + K+
Sbjct: 249 LRVLDLGSNKISNVEMKSFPKLEKLV---LNNNTIDSMKS 285
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 35/119 (29%), Positives = 70/119 (58%)
Query: 123 DAIRNI-NENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
D+ N+ ++ F +F K ++L C ++++ PN+F+ L + + L+L+EN ++++
Sbjct: 88 DSTVNVLPQDLFENVFAKQVKLERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLF 147
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTL 239
LK+L +DL+ NKI +I +F L + L L++N++ + K +F G++ LTL
Sbjct: 148 TGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTL 206
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 73/255 (28%), Positives = 122/255 (47%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDL------TNYPL 63
L++L +L L GGS+ P + C C + L + C+DL +N +
Sbjct: 9 LLSLPVLLQLATGGSS--PRSGVLLRGCPTHCHCEPDGRMLLRVDCSDLGLSELPSNLSV 66
Query: 64 FKATLNKHVNT-------KVP----LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRI 111
F + L+ +N +P L+ L + +A+ I + F G++ +K L L +
Sbjct: 67 FTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQN--- 123
Query: 112 NSITPNAFRHL--DAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQ 169
N RH+ +A++N+ +++L+L I+ + P+ F L +L+HL L
Sbjct: 124 -----NQLRHVPTEALQNLRS-------LQSLRLDANHISYVPPSCFSGLH-SLRHLWLD 170
Query: 170 ENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSF 228
+N L ++PV+ R L L + L+ NKI IPD +F L++LV L L +N + +L K F
Sbjct: 171 DNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCF 230
Query: 229 RGLELNNNLTL-YKN 242
GL L L Y N
Sbjct: 231 DGLHSLETLDLNYNN 245
Score = 143 (55.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 56/244 (22%), Positives = 111/244 (45%)
Query: 19 LIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNY-PLFKATLNKHVNTKVP 77
L++G C E + L+ C S +EL + T+Y L +++ + +P
Sbjct: 30 LLRGCPTHCHCEPDGRMLLRVDC--SDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLP 87
Query: 78 ----LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--- 129
L+ L + +A+ I + F G++ +K L L + ++ + A ++L +++++
Sbjct: 88 SLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDA 147
Query: 130 -------ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+ F+G+ +++L L + I AFR L L+ + L N + +P
Sbjct: 148 NHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLS-ALQAMTLALNKIHHIPDYAF 206
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYK 241
+L +L ++ L N+I + F L++L TL L+ NNL + + R L L +
Sbjct: 207 GNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHS 266
Query: 242 NSFR 245
N+ R
Sbjct: 267 NNIR 270
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 50/197 (25%), Positives = 96/197 (48%)
Query: 40 TCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI 99
T I + + EL N++ + P KA + N L ++ ++ I+ + + F +
Sbjct: 251 TAIRTLSNLKELGFHSNNIRSIPE-KAFVG---NPS--LITIHFYDNPIQFVGRSAFQHL 304
Query: 100 -FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL------QLSHCRINSIT 152
++ L L+ + IT F L N+ T G I +L QL + ++ ++
Sbjct: 305 PELRTLTLNGA--SQITE--FPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLS 360
Query: 153 PNAFRHL-EFT----LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
N L F+ L+ ++L+ N++ ++ V+T + L +L ++L+ NKI I ++FST
Sbjct: 361 YNLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFST 420
Query: 208 LNNLVTLKLSDNNLTLY 224
L +L+ L LS N L+ +
Sbjct: 421 LPSLIKLDLSSNLLSSF 437
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 176 (67.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 51/166 (30%), Positives = 91/166 (54%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L +L+++++A+ I+ F G+ ++ L LS NA H+ ++ TF+G+
Sbjct: 83 LTILWLHSNALARIDAAAFTGLTLLEQLDLSD--------NAQLHV-----VDPTTFHGL 129
Query: 137 -FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
+ L L C + + P FR L L++L LQ+N+L+ +P T R L NLT + L N
Sbjct: 130 GHLHTLHLDRCGLRELGPGLFRGLA-ALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGN 188
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLY 240
+I +P+ +F L++L L L N++ ++ ++FR +L +TLY
Sbjct: 189 RIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR--DLGRLMTLY 232
Score = 131 (51.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 45/154 (29%), Positives = 75/154 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR-------NIN 129
LDL +N+ + ++ TF+G+ + L L C + + P FR L A++ N+
Sbjct: 110 LDLS--DNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQ 167
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+NTF + + +L L RI S+ +AFR L +L L L +N + +V R L
Sbjct: 168 ALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLH-SLDRLLLHQNHVARVHPHAFRDLG 226
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L + L N + +P + L +L L+L+DN
Sbjct: 227 RLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDN 260
Score = 122 (48.0 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 36/125 (28%), Positives = 64/125 (51%)
Query: 121 HLDAIRNINENTFNGI-FIKNLQLS-HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
H +A+ I+ F G+ ++ L LS + +++ + P F L L L+L L ++
Sbjct: 89 HSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGH-LHTLHLDRCGLRELGP 147
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNL 237
R L L + L N + +PD++F L NL L L N + ++ +++FRGL + L
Sbjct: 148 GLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRL 207
Query: 238 TLYKN 242
L++N
Sbjct: 208 LLHQN 212
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 174 (66.3 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 51/166 (30%), Positives = 90/166 (54%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L +L+++++A+ I+ F G+ ++ L LS NA +R ++ TF G+
Sbjct: 83 LTILWLHSNALAGIDAAAFTGLTLLEQLDLSD--------NA-----QLRVVDPTTFRGL 129
Query: 137 -FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
+ L L C + + P FR L L++L LQ+N+L+ +P T R L NLT + L N
Sbjct: 130 GHLHTLHLDRCGLQELGPGLFRGLA-ALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGN 188
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLY 240
+I +P+ +F L++L L L N++ ++ ++FR +L +TLY
Sbjct: 189 RIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR--DLGRLMTLY 232
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR-------NIN 129
LDL +N+ +R ++ TF G+ + L L C + + P FR L A++ N+
Sbjct: 110 LDLS--DNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 167
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+NTF + + +L L RI S+ +AFR L +L L L +N + +V R L
Sbjct: 168 ALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLH-SLDRLLLHQNHVARVHPHAFRDLG 226
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L + L N + +P + L +L L+L+DN
Sbjct: 227 RLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/125 (29%), Positives = 65/125 (52%)
Query: 121 HLDAIRNINENTFNGI-FIKNLQLS-HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
H +A+ I+ F G+ ++ L LS + ++ + P FR L L L+L L+++
Sbjct: 89 HSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGH-LHTLHLDRCGLQELGP 147
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNL 237
R L L + L N + +PD++F L NL L L N + ++ +++FRGL + L
Sbjct: 148 GLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRL 207
Query: 238 TLYKN 242
L++N
Sbjct: 208 LLHQN 212
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 155 (59.6 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+++L+L I+ + P+ F L +L+HL L +N L ++PV+ R L L + L+ NKI
Sbjct: 21 LQSLRLDANHISYVPPSCFSGLH-SLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKI 79
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YKN 242
IPD +F L++LV L L +N + +L K F GL L L Y N
Sbjct: 80 HHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNN 126
Score = 122 (48.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/175 (27%), Positives = 84/175 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDA----------IR 126
L L ++ + I + + F+G+ +++L L + I AFR L A I
Sbjct: 21 LQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIH 80
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+I + F + + L L + RI+S+ F L +L+ L+L N+L++ P +R L
Sbjct: 81 HIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH-SLETLDLNYNNLDEFPT-AIRTLS 138
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNSFRGLELNNNLTL 239
NL + N I IP+ +F +L+T+ DN + L +++F+ L LTL
Sbjct: 139 NLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTL 193
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 168 LQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKN 226
LQ N L QVP E L++L++L + L N I +P FS L++L L L DN LT +
Sbjct: 2 LQNNHLRQVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQ 61
Query: 227 SFRGLELNNNLTLYKN 242
+FR L +TL N
Sbjct: 62 AFRSLSALQAMTLALN 77
Score = 115 (45.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 122 LDA--IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
LDA I + + F+G+ +++L L + I AFR L L+ + L N + +P
Sbjct: 26 LDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLS-ALQAMTLALNKIHHIPD 84
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLT 238
+L +L ++ L N+I + F L++L TL L+ NNL + + R L L
Sbjct: 85 YAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELG 144
Query: 239 LYKNSFR 245
+ N+ +
Sbjct: 145 FHSNNIK 151
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 175 (66.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 48/132 (36%), Positives = 74/132 (56%)
Query: 116 PNAFRHLDA----IRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQE 170
P R LD I+ +N++ F N ++ L+L+ I++I P AF +L F L+ L L+
Sbjct: 63 PTETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNL-FNLRTLGLRS 121
Query: 171 NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFR 229
N L+ +P+ L NLT +D+S+NKI + D F L NL +L++ DN+L + +F
Sbjct: 122 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 181
Query: 230 GLELNNNLTLYK 241
GL LTL K
Sbjct: 182 GLNSLEQLTLEK 193
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/244 (25%), Positives = 107/244 (43%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE-LSIQCNDLTNYPLFKA 66
+ L++L +++ G + CP E ++ + +C + E + + L
Sbjct: 19 ILLLMLGSILSGSATGCPPRCECSAQ-ERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIK 77
Query: 67 TLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDA 124
TLN+ P L+ L +N + I I FN +F ++ L L R+ I F L
Sbjct: 78 TLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSN 137
Query: 125 IR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++ +L
Sbjct: 138 LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKCNL 196
Query: 174 EQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFRGL 231
+P E L HL L ++ L I I D SF L L L++S T+ N GL
Sbjct: 197 TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGL 256
Query: 232 ELNN 235
L +
Sbjct: 257 NLTS 260
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 79 DLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAI-----RNINEN-- 131
DL+YI++ A +N ++ L L C + SI A HL + R++N N
Sbjct: 171 DLVYISHRAFSGLNS-------LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 223
Query: 132 ---TFNGIF-IKNLQLSHCR-INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+F ++ +K L++SH ++++T N L T L++ +L +P ++RHL
Sbjct: 224 RDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLT--SLSITHCNLTSIPYVSVRHLVY 281
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGL 231
L ++LS N I I L L ++L LT + +FRGL
Sbjct: 282 LRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGL 327
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 52/168 (30%), Positives = 87/168 (51%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L+ L + + + I + F G+F +K L L + ++ + A ++L +++++
Sbjct: 18 LEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLR------- 70
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
L +H IN + PN F L +L+HL L +N L ++P++ R L L + L+ NK
Sbjct: 71 ----LDANH--INYVPPNCFNGL-VSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNK 123
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
I IPD +F L++LV L L +N + +L K F GL L L NS
Sbjct: 124 IHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNS 171
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 122 LDAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
++ I + N + + F++ L+L+ + I AF L F+LK L LQ N L QVP E
Sbjct: 1 MNNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGL-FSLKVLMLQNNQLRQVPTEA 59
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
L++L++L + L N I +P + F+ L +L L L DN+LT + +FR L +TL
Sbjct: 60 LQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTL 119
Query: 240 YKN 242
N
Sbjct: 120 ALN 122
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 59/202 (29%), Positives = 92/202 (45%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHC 109
L +Q N L P +A N + LD +IN + N FNG+ +++L L
Sbjct: 45 LMLQNNQLRQVPT-EALQNLRSLQSLRLDANHINY-----VPPNCFNGLVSLRHLWLDDN 98
Query: 110 RINSITPNAFRHLDAIR------N----INENTFNGIF-IKNLQLSHCRINSITPNAFRH 158
+ I AFR L A++ N I + F + + L L + RI S+ F
Sbjct: 99 SLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDG 158
Query: 159 LEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSD 218
L +L+ L+L N L++ P +R L NL + N I IP+ +F +L+T+ D
Sbjct: 159 LH-SLETLDLNYNSLDEFPT-AIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYD 216
Query: 219 NNLTLY-KNSFRGLELNNNLTL 239
N + L K++F+ L LTL
Sbjct: 217 NPIQLVGKSAFQNLPELRTLTL 238
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 171 (65.3 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 64/226 (28%), Positives = 107/226 (47%)
Query: 34 ESELQS---TCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDL--LYINNSAI 88
+SE++S C+C +S Q LT P T++P+ ++++N+ I
Sbjct: 21 QSEVESCPGACVCYSEPKITISCQQQGLTAIP-----------TEIPIQSQRIFLHNNKI 69
Query: 89 RNINENTFNGIFIKNLQLSHCR-INSITPNAF------RHLDA-----IRNINENTFNG- 135
+ +F + H I+ I P AF LD +++IN TF G
Sbjct: 70 TLVRSTSFTSCRNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGL 129
Query: 136 IFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
+ + L L C + ++ FR L F+L++L LQ+N+L+ + +T L NLT + L N
Sbjct: 130 VHLHTLHLDRCGLMELSTGLFRGL-FSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGN 188
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLTL-YKNSFRGLELNNNLTLY 240
KI + ++ F L NL L L N ++L ++ SF +L +TLY
Sbjct: 189 KIKSLSENVFRGLINLDRLLLHQNRVSLVHRRSFH--DLGKVMTLY 232
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLS-HCRINSITPNAFR--------HLD--AI 125
+ +L+I+++ I I F G+ ++ L LS + + SI P FR HLD +
Sbjct: 83 MTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGLVHLHTLHLDRCGL 142
Query: 126 RNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
++ F G+F ++ L L + ++ + F L L +L L N ++ + R L
Sbjct: 143 MELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLA-NLTYLFLHGNKIKSLSENVFRGL 201
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
NL + L +N++ + SF L ++TL L +NNLT+
Sbjct: 202 INLDRLLLHQNRVSLVHRRSFHDLGKVMTLYLFNNNLTV 240
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 99 IFIKNLQLSHCRINSITP--NA---FRHLDAIRNINENTFNGIF-IKNLQLS-HCRINSI 151
IF+ N +++ R S T N + H + I I F G+ ++ L LS + + SI
Sbjct: 62 IFLHNNKITLVRSTSFTSCRNMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSI 121
Query: 152 TPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNL 211
P FR L L L+L L ++ R L +L + L N + + DD+F L NL
Sbjct: 122 NPVTFRGLVH-LHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANL 180
Query: 212 VTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
L L N + +L +N FRGL + L L++N
Sbjct: 181 TYLFLHGNKIKSLSENVFRGLINLDRLLLHQN 212
>UNIPROTKB|H3BQ49 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0005154 "epidermal growth factor receptor
binding" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] InterPro:IPR003591
SMART:SM00369 GO:GO:0043491 GO:GO:0031175 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715 HGNC:HGNC:21205
EMBL:AC046168 EMBL:AC105133 EMBL:AC110607 Ensembl:ENST00000561686
Bgee:H3BQ49 Uniprot:H3BQ49
Length = 179
Score = 151 (58.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 34/98 (34%), Positives = 60/98 (61%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F L+ L L+ N L+ +P+
Sbjct: 77 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTG 135
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
L NLT +D+S+NKI + D F L NL +L++ DN+L
Sbjct: 136 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 173
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 59/205 (28%), Positives = 102/205 (49%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHC 109
L + N LT++ + +T + L +L ++N+A+ I TF + F++ L + +
Sbjct: 312 LDLSGNQLTSHHVDNSTFAGLIR----LIVLNLSNNALTRIGSKTFKELYFLQILDMRNN 367
Query: 110 RINSITPNAFRHLDAIRNIN--ENT--------FNGIFI-KNLQLSHCRINSITPNAFRH 158
I I AF L + +N EN FNG+++ L L++ ++ + AFR+
Sbjct: 368 SIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRN 427
Query: 159 LEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSD 218
LK L+L N L +VP E ++ L L +DL +N+I + +++F LN L L+L D
Sbjct: 428 CS-DLKELDLSSNQLTEVP-EAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLID 485
Query: 219 NNL-TLYKNSFRGLELNNNLTLYKN 242
N + + F+ L + L L KN
Sbjct: 486 NRIGNITVGMFQDLPRLSVLNLAKN 510
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 60/219 (27%), Positives = 103/219 (47%)
Query: 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF 96
L S EL +Q NDL Y L K L++ + + LDL N +++ +TF
Sbjct: 274 LPSEAFAGNKELRELHLQGNDL--YELPKGLLHR-LEQLLVLDLSG-NQLTSHHVDNSTF 329
Query: 97 NGIF-IKNLQLSHCRINSITPNAFRHL----------DAIRNINENTFNGIF-IKNLQLS 144
G+ + L LS+ + I F+ L ++I +I E F ++ + L L+
Sbjct: 330 AGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLA 389
Query: 145 HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDS 204
R++++ F L + L L L N + V + R+ +L +DLS N++ ++P+ +
Sbjct: 390 ENRLHTLDNRIFNGL-YVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPE-A 447
Query: 205 FSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNLTLYKN 242
L+ L TL L +N ++ +KN+ FR L L L N
Sbjct: 448 VQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDN 486
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 49/179 (27%), Positives = 86/179 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFN 134
L +L + N++I +I E F ++ + L L+ R++++ F L + + N N +
Sbjct: 359 LQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVS 418
Query: 135 GI----F-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ F +K L LS ++ + P A + L LK L+L EN + + T R+L
Sbjct: 419 IVESQAFRNCSDLKELDLSSNQLTEV-PEAVQDLSM-LKTLDLGENQISEFKNNTFRNLN 476
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSF-RGLELNNNLTLYKN 242
LT + L N+IG I F L L L L+ N + ++ + +F + E+ + L KN
Sbjct: 477 QLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEA-IRLDKN 534
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 49/179 (27%), Positives = 82/179 (45%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTF- 133
L L + ++ I + N G+ ++ L +S+ + S+ AF +R ++ N
Sbjct: 237 LQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLY 296
Query: 134 ---NGIF--IKNLQLSHCRINSITPNAFRHLEFT----LKHLNLQENDLEQVPVETLRHL 184
G+ ++ L + N +T + + F L LNL N L ++ +T + L
Sbjct: 297 ELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKEL 356
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
L ++D+ N IG I + +F L NL TL L++N L TL F GL + LTL N
Sbjct: 357 YFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNN 415
Score = 120 (47.3 bits), Expect = 0.00047, P = 0.00047
Identities = 36/156 (23%), Positives = 74/156 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIFI-KNLQLSHCRINSITPNAFRHLDAIR--NINENTFN 134
L L + + + ++ FNG+++ L L++ ++ + AFR+ ++ +++ N
Sbjct: 383 LHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLT 442
Query: 135 GI--------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ +K L L +I+ N FR+L L L L +N + + V + L
Sbjct: 443 EVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLN-QLTGLRLIDNRIGNITVGMFQDLPR 501
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
L++++L+KN+I I +F + ++L N LT
Sbjct: 502 LSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLT 537
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 170 (64.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/166 (30%), Positives = 90/166 (54%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L +L+++++ + I+ F G+ ++ L LS NA +R+++ TF+G+
Sbjct: 83 LTILWLHSNVLARIDAAAFTGLALLEQLDLSD--------NA-----QLRSVDPATFHGL 129
Query: 137 F-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
+ L L C + + P FR L L++L LQ+N L+ +P +T R L NLT + L N
Sbjct: 130 GRLHTLHLDRCGLQELGPGLFRGLA-ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 188
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLY 240
+I +P+ +F L++L L L N + ++ ++FR +L +TLY
Sbjct: 189 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR--DLGRLMTLY 232
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 44/154 (28%), Positives = 77/154 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIR 126
LDL +N+ +R+++ TF+G+ + L L C + + P FR L +A++
Sbjct: 110 LDLS--DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 167
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ ++TF + + +L L RI+S+ AFR L +L L L +N + V R L
Sbjct: 168 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L + L N + +P ++ + L L L+L+DN
Sbjct: 227 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 260
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 121 HLDAIRNINENTFNGI-FIKNLQLS-HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
H + + I+ F G+ ++ L LS + ++ S+ P F L L L+L L+++
Sbjct: 89 HSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG-RLHTLHLDRCGLQELGP 147
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNL 237
R L L + L N + +PDD+F L NL L L N ++ + + +FRGL + L
Sbjct: 148 GLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 207
Query: 238 TLYKN 242
L++N
Sbjct: 208 LLHQN 212
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 171 (65.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF---RHL-------DAIRNIN 129
LY+ + I INE+ G+ + L L + I + P AF RHL + I+ ++
Sbjct: 65 LYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLD 124
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
F G+ ++NL L + +++ + F L ++++LNLQ N L + T + L
Sbjct: 125 PGIFKGLLNLRNLYLQYNQVSFVPRGVFNDL-VSVQYLNLQRNRLTVLGSGTFVGMVALR 183
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
++DLS N I +I + F L NL L L NNLT + N+F L+ L+L N
Sbjct: 184 ILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHN 238
Score = 168 (64.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 56/162 (34%), Positives = 88/162 (54%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSIT--P-NAFRHLDAIR--NINE 130
V L +L ++N+ I I+E+ F ++NL + N++T P NAF L ++R +++
Sbjct: 180 VALRILDLSNNNILRISESGFQ--HLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSH 237
Query: 131 NTFNGI--F----IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
N I F + NL+ L + RI ++T + F + LKHL L NDLE + +T
Sbjct: 238 NPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGIN-NLKHLILSHNDLENLNSDTF 296
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLN-NLVTLKLSDNNLT 222
LKNL + L +N+I I +D+F + +L L LS NNLT
Sbjct: 297 SLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLT 338
Score = 160 (61.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 52/178 (29%), Positives = 90/178 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIR--NINEN--- 131
L L++NN+ I+ ++ F G+ ++NL L + +++ + F L +++ N+ N
Sbjct: 110 LYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLT 169
Query: 132 -----TFNG-IFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
TF G + ++ L LS+ I I+ + F+HLE L L L N+L +VP LK
Sbjct: 170 VLGSGTFVGMVALRILDLSNNNILRISESGFQHLE-NLACLYLGSNNLTKVPSNAFEVLK 228
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
+L + LS N I I +F L NL L L ++ + + ++ F G+ +L L N
Sbjct: 229 SLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHN 286
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 73 NTKVPLDLLYINNSAIRNINENTFNG-IFIKNLQLSHCRINSITPNAFRHLDAI------ 125
N V + L + + + + TF G + ++ L LS+ I I+ + F+HL+ +
Sbjct: 153 NDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLG 212
Query: 126 -RNINE---NTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
N+ + N F + ++ L LSH I +I P AF+ L L++L L+ + + V +
Sbjct: 213 SNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLA-NLEYLLLKNSRIRNVTRDG 271
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN 226
+ NL + LS N + + D+FS L NL+ LKL N + N
Sbjct: 272 FSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDN 317
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 169 (64.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 60/186 (32%), Positives = 90/186 (48%)
Query: 72 VNTKVPLDL--LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI 128
V T +P + L I N+ I +NE+ F I + L++ ++ ITP AFR+L ++R +
Sbjct: 47 VPTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYL 106
Query: 129 N--ENTFN----GIF-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
+ N G+F +++L LS ++ I P F LK L L N LE +P
Sbjct: 107 SLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCS-NLKELQLHGNHLEYIP 165
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNN 236
HL LT ++L KN + I F L NL L+L +N LT + +F GL
Sbjct: 166 DGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQE 225
Query: 237 LTLYKN 242
L L +N
Sbjct: 226 LALQQN 231
Score = 149 (57.5 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 54/170 (31%), Positives = 83/170 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L+ L ++++ + I F+ +K LQL + I AF HL + +N
Sbjct: 127 LESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLG----- 181
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
KN L+H I+P F+HL L+ L L EN L +P+ T L NL + L +N+
Sbjct: 182 --KN-SLTH-----ISPRVFQHLG-NLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQ 232
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
IG + F +NL L LS+N+++ L + F L N LTL+ NS +
Sbjct: 233 IGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLK 282
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 54/206 (26%), Positives = 98/206 (47%)
Query: 58 LTNYPLFKATLNKHVNTKV-----PLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRI 111
LT L K +L H++ +V L +L + + + +I TF+G+ ++ L L +I
Sbjct: 175 LTKLNLGKNSLT-HISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQI 233
Query: 112 NSITPNAFRHLDAIRNI--NENTFN----GIFIKNLQLSHCRI--NSI---TPNAFRHLE 160
++P F + ++ + + N + +F++ QL+ + NS+ +P F +
Sbjct: 234 GLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMP 293
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L+ L L +N + +P +L+ L ++ LS+N+I I +F+ L L L L N
Sbjct: 294 -NLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNA 352
Query: 221 LT-LYKNSFRGLELNNNLTLYKNSFR 245
L L N FR L N++L N R
Sbjct: 353 LQDLDGNVFRMLANLQNISLQNNRLR 378
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 63/236 (26%), Positives = 102/236 (43%)
Query: 22 GGSAQCPWEDESESELQSTCICSYNTA---NELSIQCNDLTNYPLFKATLNKHVNTKVPL 78
G ++C S+ E I + T N +S+Q + N + + + +N L
Sbjct: 24 GCPSECTCSRASQVECTGARIVAVPTPLPWNAMSLQ---ILNTHITELNESPFLNISA-L 79
Query: 79 DLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNG 135
L I + + I F + ++ L L++ ++ + F+ LD++ ++ + N
Sbjct: 80 IALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQ 139
Query: 136 I----F-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
I F +K LQL + I AF HL L LNL +N L + +HL N
Sbjct: 140 IQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHL-VGLTKLNLGKNSLTHISPRVFQHLGN 198
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNN-NLT-LY 240
L ++ L +N++ IP +F L NL L L N + L GL NN NL LY
Sbjct: 199 LQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSP---GLFHNNHNLQRLY 251
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 54 QCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRI 111
Q N LT + L+ + +P L L++ ++ I ++ +N F+ + ++ L LS +I
Sbjct: 270 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 329
Query: 112 NSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ I+P AF L +R ++ +T N + + N FR L L++++LQ N
Sbjct: 330 SFISPGAFNGLTELRELSLHT-NAL------------QDLDGNVFRMLA-NLQNISLQNN 375
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L Q+P ++ L I L N++ +P F L L L+L DN
Sbjct: 376 RLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYDN 423
>WB|WBGene00008093 [details] [associations]
symbol:lron-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00700000104056 eggNOG:KOG0619
EMBL:Z79598 RefSeq:NP_510424.4 ProteinModelPortal:Q93377 SMR:Q93377
EnsemblMetazoa:C44H4.1 GeneID:181553 KEGG:cel:CELE_C44H4.1
UCSC:C44H4.1 CTD:181553 WormBase:C44H4.1 HOGENOM:HOG000018355
InParanoid:Q93377 OMA:TDSKLPH NextBio:914416 Uniprot:Q93377
Length = 607
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 74/252 (29%), Positives = 113/252 (44%)
Query: 13 LILLTALIQGGS-AQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKH 71
L+L LI G +QCP +LQ C C+ +SI C+ ++ A L
Sbjct: 3 LLLFNLLIAGWVYSQCP-----TLQLQEPCTCTSTRYEAVSINCDGGSS---LDAVLESL 54
Query: 72 VNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR-HLD-AIRN-- 127
N+ +D L I+N+ I + F G IK L L + + S PN F +L+ ++
Sbjct: 55 SNSPQAIDSLTISNTPIEKMPGYAFQGFQIKKLFLRNNGLRSFHPNTFTGNLENSLEELE 114
Query: 128 INENTFNGI---------FIKNLQLSHCRINSITPNAFR--HLEFTLKHLNLQENDLEQV 176
I N +GI +K L L I + NAF H +L L+L N+L +
Sbjct: 115 IRGNYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANNLTAI 174
Query: 177 PVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNN 235
L L+NL+ + L KN + +IP + + +L L L N + T+ +NS L L N
Sbjct: 175 HPTGLLGLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNS---LPLPN 231
Query: 236 --NLTLYKNSFR 245
+L+L N R
Sbjct: 232 LKSLSLEVNQIR 243
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 42/148 (28%), Positives = 75/148 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCR-INSITPNAFRHLDAIRN-INENTF- 133
L LY+ N+ + +I+ + F I +K L +S+ + I SI N + + I F
Sbjct: 256 LSYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANGKLSVQQFKLCICILAFQ 315
Query: 134 NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLS 193
+ + L+L C I+ I P + + ++ ++ + L N + ++ +T +L L+ +DLS
Sbjct: 316 HAPSLIRLELFDCSISRIEPKSLQKVQH-IQVILLSRNQITRISHDTFSNLPELSELDLS 374
Query: 194 KNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
N I + D +FS L L +L LS N L
Sbjct: 375 GNSINAVDDFAFSQLPMLTSLDLSSNRL 402
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 41/119 (34%), Positives = 70/119 (58%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F+L+ L L+ N L+ +P+
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FSLRTLGLRSNRLKLIPLGVFTG 141
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L NL +L++ DN+L + +F GL LTL K
Sbjct: 142 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 71 HVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN 129
H+++ + L L ++N +AIR+ + F ++ +K L++SH + +LD +
Sbjct: 213 HLHSLIVLRLRHLNINAIRDYS---FKRLYRLKVLEISH----------WPYLDTM---T 256
Query: 130 ENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTL 189
N G+ + +L ++HC + ++ A RHL + L+ LNL N + + L L L
Sbjct: 257 PNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY-LRFLNLSYNPIGTIEGSMLHELLRLQE 315
Query: 190 IDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
I L ++ + +F LN L L +S N LT L +++F + L L N
Sbjct: 316 IQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/246 (24%), Positives = 110/246 (44%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE---LSIQCNDLTNYPLF 64
+ L++L +++ G + CP E ++ ++ +C + E + DL +
Sbjct: 26 ILLLVLGSVLSGSATGCPPRCECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRI- 83
Query: 65 KATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
TLN+ P L+ L +N + + + FN +F ++ L L R+ I F L
Sbjct: 84 -KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGL 142
Query: 123 DAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 201
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFR 229
+L +P E L HL +L ++ L I I D SF L L L++S T+ N
Sbjct: 202 NLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 261
Query: 230 GLELNN 235
GL L +
Sbjct: 262 GLNLTS 267
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNIN 129
L I+ + I + E+ F F++ LQL+ ++ I P A L + ++ +
Sbjct: 62 LDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVP 121
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
G+ +++L+L I S+ ++F L L+HL L +N L +VPV L +L L
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGL-VQLRHLWLDDNSLTEVPVHPLSNLPTLQ 180
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YKN 242
+ L+ NKI IPD +F+ L++LV L L +N + +L ++ F GL+ L L Y N
Sbjct: 181 ALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYNN 236
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 50/155 (32%), Positives = 83/155 (53%)
Query: 100 FIKNLQLSHCRINSITPNAFRHLDAIR--NINENTFNGI---------FIKNLQLSHCRI 148
F++ L+LS R+ I AF L +++ + N GI +++L+L I
Sbjct: 88 FLEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLI 147
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+ + +F L +L+HL L +N L ++PV L HL+ L + L+ N+IG++PD +F L
Sbjct: 148 SLVPDRSFEGLT-SLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNL 206
Query: 209 NNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
++LV L L +N + L +SF GL+ L L N
Sbjct: 207 SSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCN 241
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
L LS + + P F HL F L+ L L N L +P + L +L ++ L N++G I
Sbjct: 68 LDLSMNSLTELWPGVFHHLRF-LEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGI 126
Query: 201 PDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYKNS 243
P ++ L L +L+L N ++L + SF GL +L L N+
Sbjct: 127 PAEALWELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNA 170
Score = 117 (46.2 bits), Expect = 0.00065, P = 0.00065
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHC 109
L + CN L +P+ TL + L L +N+ IR I E F G ++ +
Sbjct: 236 LDLNCNQLHEFPVAIQTLGR-------LQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDN 288
Query: 110 RINSITPNAFRHLDAIRNINENTFNGI--F--------IKNLQLSHCRINSITPNAFRHL 159
I + +AF+HL + ++ N I F +++L L+ + + P + L
Sbjct: 289 PIQFVGRSAFQHLPGLHTLSLNGATDIQEFPDLRGTTSLESLTLTRAGLQRLPPGMCQQL 348
Query: 160 EFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L+ L L N +E +P +LR + L I L N+I ++ D+F L L +L LS N
Sbjct: 349 P-RLRVLELSHNLIEGLP--SLRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWN 405
Query: 220 NL-TLYKNSFRGLELNNNLTLYKN 242
+ +++ +F L L L N
Sbjct: 406 AIRSIHPEAFSTLRSLVKLDLTGN 429
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 168 (64.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/119 (34%), Positives = 69/119 (57%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F L+ L L+ N L+ +P+
Sbjct: 77 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTG 135
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L NL +L++ DN+L + +F GL LTL K
Sbjct: 136 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 194
Score = 133 (51.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
YN + L + NDL Y +A +N+ L L N ++I + +G+ + L
Sbjct: 161 YNLKS-LEVGDNDLV-YISHRAFSG--LNSLEQLTLEKCNLTSIPTEALSHLHGLIV--L 214
Query: 105 QLSHCRINSITPNAFRHLDAIR-----------NINENTFNGIFIKNLQLSHCRINSITP 153
+L H IN+I +F+ L ++ + N G+ + +L ++HC + ++
Sbjct: 215 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 274
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
A RHL + L+ LNL N + + L L L I L ++ + +F LN L
Sbjct: 275 LAVRHLVY-LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 333
Query: 214 LKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +S N LT L +++F + L L N
Sbjct: 334 LNVSGNQLTTLEESAFHSVGNLETLILDSN 363
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE---LSIQCNDLTNYPLF 64
+ L++L +++ G + CP E ++ ++ +C + E + DL +
Sbjct: 20 ILLLVLGSVLSGSATGCPPRCECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRI- 77
Query: 65 KATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
TLN+ P L+ L +N + + + FN +F ++ L L R+ I F L
Sbjct: 78 -KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 123 DAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++
Sbjct: 137 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 195
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFR 229
+L +P E L HL L ++ L I I D SF L L L++S T+ N
Sbjct: 196 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 255
Query: 230 GLELNN 235
GL L +
Sbjct: 256 GLNLTS 261
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 168 (64.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/119 (34%), Positives = 69/119 (57%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F L+ L L+ N L+ +P+
Sbjct: 77 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTG 135
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L NL +L++ DN+L + +F GL LTL K
Sbjct: 136 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 194
Score = 131 (51.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
YN + L + NDL Y +A +N+ L L N ++I + +G+ + L
Sbjct: 161 YNLKS-LEVGDNDLV-YISHRAFSG--LNSLEQLTLEKCNLTSIPTEALSHLHGLIV--L 214
Query: 105 QLSHCRINSITPNAFRHLDAIR-----------NINENTFNGIFIKNLQLSHCRINSITP 153
+L H IN+I +F+ L ++ + N G+ + +L ++HC + ++
Sbjct: 215 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 274
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
A RHL + L+ LNL N + + L L L I L ++ + +F LN L
Sbjct: 275 LAVRHLVY-LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 333
Query: 214 LKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +S N LT L +++F + L L N
Sbjct: 334 LNVSGNQLTTLEESAFHSVGNLETLILDSN 363
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE---LSIQCNDLTNYPLF 64
+ L++L +++ G + CP E ++ ++ +C + E + DL +
Sbjct: 20 ILLLVLGSVLSGSATGCPPRCECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRI- 77
Query: 65 KATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
TLN+ P L+ L +N + + + FN +F ++ L L R+ I F L
Sbjct: 78 -KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 136
Query: 123 DAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++
Sbjct: 137 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 195
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFR 229
+L +P E L HL L ++ L I I D SF L L L++S T+ N
Sbjct: 196 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 255
Query: 230 GLELNN 235
GL L +
Sbjct: 256 GLNLTS 261
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 168 (64.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/119 (34%), Positives = 69/119 (57%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F L+ L L+ N L+ +P+
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTG 141
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L NL +L++ DN+L + +F GL LTL K
Sbjct: 142 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Score = 133 (51.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
YN + L + NDL Y +A +N+ L L N ++I + +G+ + L
Sbjct: 167 YNLKS-LEVGDNDLV-YISHRAFSG--LNSLEQLTLEKCNLTSIPTEALSHLHGLIV--L 220
Query: 105 QLSHCRINSITPNAFRHLDAIR-----------NINENTFNGIFIKNLQLSHCRINSITP 153
+L H IN+I +F+ L ++ + N G+ + +L ++HC + ++
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 280
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
A RHL + L+ LNL N + + L L L I L ++ + +F LN L
Sbjct: 281 LAVRHLVY-LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 339
Query: 214 LKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +S N LT L +++F + L L N
Sbjct: 340 LNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE---LSIQCNDLTNYPLF 64
+ L++L +++ G + CP E ++ ++ +C + E + DL +
Sbjct: 26 ILLLVLGSVLSGSATGCPPRCECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRI- 83
Query: 65 KATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
TLN+ P L+ L +N + + + FN +F ++ L L R+ I F L
Sbjct: 84 -KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 123 DAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 201
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFR 229
+L +P E L HL L ++ L I I D SF L L L++S T+ N
Sbjct: 202 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 261
Query: 230 GLELNN 235
GL L +
Sbjct: 262 GLNLTS 267
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 168 (64.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/119 (34%), Positives = 69/119 (57%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F L+ L L+ N L+ +P+
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTG 141
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L NL +L++ DN+L + +F GL LTL K
Sbjct: 142 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 51/194 (26%), Positives = 87/194 (44%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
YN + L + NDL Y +A +N+ L L N ++I + +G+ + L
Sbjct: 167 YNLKS-LEVGDNDLV-YISHRAFSG--LNSLEQLTLEKCNLTSIPTEALSHLHGLIV--L 220
Query: 105 QLSHCRINSITPNAFRHLDAIR-----------NINENTFNGIFIKNLQLSHCRINSITP 153
+L H IN+I +F+ L ++ + N G+ + +L ++HC + ++
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 280
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
A RHL + L+ LNL N + + L L L I L ++ + +F LN L
Sbjct: 281 LAVRHLVY-LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 339
Query: 214 LKLSDNNLTLYKNS 227
L +S N LT + S
Sbjct: 340 LNVSGNQLTTLEES 353
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE---LSIQCNDLTNYPLF 64
+ L++L +++ G + CP E ++ ++ +C + E + DL +
Sbjct: 26 ILLLVLGSVLSGSATGCPPRCECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRI- 83
Query: 65 KATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
TLN+ P L+ L +N + + + FN +F ++ L L R+ I F L
Sbjct: 84 -KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 123 DAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 201
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFR 229
+L +P E L HL L ++ L I I D SF L L L++S T+ N
Sbjct: 202 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 261
Query: 230 GLELNN 235
GL L +
Sbjct: 262 GLNLTS 267
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 168 (64.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/119 (34%), Positives = 69/119 (57%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I+ +N++ F ++ L+L+ ++++ P AF +L F L+ L L+ N L+ +P+
Sbjct: 83 IKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTG 141
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L NL +L++ DN+L + +F GL LTL K
Sbjct: 142 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 200
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
YN + L + NDL Y +A +N+ L L N ++I + +G+ + L
Sbjct: 167 YNLKS-LEVGDNDLV-YISHRAFSG--LNSLEQLTLEKCNLTSIPTEALSHLHGLIV--L 220
Query: 105 QLSHCRINSITPNAFRHLDAIR-----------NINENTFNGIFIKNLQLSHCRINSITP 153
+L H IN+I +F+ L ++ + N G+ + +L ++HC + ++
Sbjct: 221 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 280
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
A RHL + L+ LNL N + + L L L I L ++ + +F LN L
Sbjct: 281 LAVRHLVY-LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 339
Query: 214 LKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +S N LT L +++F + L L N
Sbjct: 340 LNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICS---YNTANE---LSIQCNDLTNYPLF 64
+ L++L +++ G + CP E ++ ++ +C + E + DL +
Sbjct: 26 ILLLVLGSVLSGSATGCPPRCECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRI- 83
Query: 65 KATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
TLN+ P L+ L +N + + + FN +F ++ L L R+ I F L
Sbjct: 84 -KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGL 142
Query: 123 DAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ +I+EN F ++ +K+L++ + I+ AF L +L+ L L++
Sbjct: 143 SNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKC 201
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNSFR 229
+L +P E L HL L ++ L I I D SF L L L++S T+ N
Sbjct: 202 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 261
Query: 230 GLELNN 235
GL L +
Sbjct: 262 GLNLTS 267
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 170 (64.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 54/177 (30%), Positives = 92/177 (51%)
Query: 80 LLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNI 128
LL I+ + I + E+ F F++ L+L+ ++ I P A L + ++ +
Sbjct: 144 LLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTV 203
Query: 129 NENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
G+ +++L+L I S+ ++F L L+HL L +N L +VPV L +L L
Sbjct: 204 PSEAIRGLSSLQSLRLDANHITSVPEDSFEGLT-QLRHLWLDDNSLTEVPVHPLSNLPTL 262
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YKN 242
+ L+ NKI IPD +F+ L++LV L L +N + +L ++ F GL+ L L Y N
Sbjct: 263 QALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNN 319
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/202 (26%), Positives = 92/202 (45%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPL---DLLYINNSAIRNINENTFNGIFIKNLQLS 107
L I N++T P A N ++ L DL +I+ A+ + E + ++N QL
Sbjct: 145 LDISMNNITQLPE-DAFKNFPFLEELRLAGNDLSFIHPKALSGLKE--LKVLTLQNNQLK 201
Query: 108 HC---RINSITPNAFRHLDA--IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEF 161
I ++ LDA I ++ E++F G+ +++L L + + + +L
Sbjct: 202 TVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLP- 260
Query: 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
TL+ L L N + +P +L +L ++ L NKI + F L+NL TL L+ NNL
Sbjct: 261 TLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNL 320
Query: 222 TLYKNSFRGLELNNNLTLYKNS 243
+ + + L L + NS
Sbjct: 321 GEFPQAIKALPSLKELLFHSNS 342
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/189 (26%), Positives = 90/189 (47%)
Query: 62 PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSH--------CRINS 113
PL K T++ + N PL ++ NSA N++E + + I+ + R+ S
Sbjct: 355 PLLK-TIHLYDN---PLS--FVGNSAFHNLSE--LHSLVIRGASMVQRFPNLTGTVRLES 406
Query: 114 ITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
+T + N+ + ++ L LS+ I + P+ F L+ ++LQ N +
Sbjct: 407 LTLTGTKISSISNNLCQEQKR---LRTLDLSYNSIKDL-PS-FNGCH-ALEEISLQRNQI 460
Query: 174 EQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLEL 233
Q+ +T + L +L ++DLS+N I +I D +F+ L ++ L +S N LT + GL
Sbjct: 461 HQIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTSFPTE--GLNG 518
Query: 234 NNNLTLYKN 242
N L L N
Sbjct: 519 LNQLKLVGN 527
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 166 (63.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 48/166 (28%), Positives = 87/166 (52%)
Query: 78 LDLLYINNSAIRNINENTFNG-IFIKNLQLS-HCRINSITPNAFRHLDAIRNINENTFNG 135
L +L+++++A+ I+ F G + ++ L LS + ++ ++ P FR L +
Sbjct: 83 LTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHT-------- 134
Query: 136 IFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
L L C + + P FR L L++L LQ+N L+ +P + R L NLT + L N
Sbjct: 135 -----LHLDRCGLQELGPGLFRGLA-ALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGN 188
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLY 240
+I +P+ +F L++L L L N + ++ ++FR +L +TLY
Sbjct: 189 RIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR--DLGRLMTLY 232
Score = 132 (51.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 121 HLDAIRNINENTFNG-IFIKNLQLS-HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
H +A+ I+ F G + ++ L LS + ++ ++ P FR L L L+L L+++
Sbjct: 89 HSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLG-RLHTLHLDRCGLQELGP 147
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNL 237
R L L + L N + +PDD+F L NL L L N + ++ + +FRGL + L
Sbjct: 148 GLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRL 207
Query: 238 TLYKN 242
L++N
Sbjct: 208 LLHQN 212
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFN 134
LDL +N+ +R ++ TF G+ + L L C + + P FR L A++ + +N
Sbjct: 110 LDLS--DNAQLRAVDPATFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQ 167
Query: 135 GI---FIKNL-QLSHC-----RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ ++L L+H RI S+ AFR L +L L L +N + V R L
Sbjct: 168 ALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L + L N + + ++ + L L L+L+DN
Sbjct: 227 RLMTLYLFANNLSALSAEALAPLRALQYLRLNDN 260
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 166 (63.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 66/220 (30%), Positives = 101/220 (45%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANEL--SIQ--CNDLT-NY-PL 63
L +LLT ++ CP E ++ C E+ SI C L+ Y L
Sbjct: 18 LAPTVLLT-MLSSAERGCPKGCRCEGKM---VYCESQKLQEIPSSISAGCLGLSLRYNSL 73
Query: 64 FKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
K N+ L LY++++ I NI+EN FNGI +K L LS RI+ N FR
Sbjct: 74 QKLKYNQFKGLN-QLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFR-- 130
Query: 123 DAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLR 182
+ N+ +NL LS+ +++S+ FR L L L+L+ N L +PV +
Sbjct: 131 -PVTNL----------RNLDLSYNQLHSLGSEQFRGLRKLLS-LHLRSNSLRTIPVRIFQ 178
Query: 183 HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
+NL L+DL N+I + + F+ + L L L N +
Sbjct: 179 DCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFS 218
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 166 (63.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 66/220 (30%), Positives = 101/220 (45%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANEL--SIQ--CNDLT-NY-PL 63
L +LLT ++ CP E ++ C E+ SI C L+ Y L
Sbjct: 18 LAPTVLLT-MLSSAERGCPKGCRCEGKM---VYCESQKLQEIPSSISAGCLGLSLRYNSL 73
Query: 64 FKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
K N+ L LY++++ I NI+EN FNGI +K L LS RI+ N FR
Sbjct: 74 QKLKYNQFKGLN-QLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFR-- 130
Query: 123 DAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLR 182
+ N+ +NL LS+ +++S+ FR L L L+L+ N L +PV +
Sbjct: 131 -PVTNL----------RNLDLSYNQLHSLGSEQFRGLRKLLS-LHLRSNSLRTIPVRIFQ 178
Query: 183 HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
+NL L+DL N+I + + F+ + L L L N +
Sbjct: 179 DCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEHNQFS 218
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 166 (63.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 54/172 (31%), Positives = 89/172 (51%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF------RHLDAIRN----IN 129
L ++ +A+R++ N F + ++ L L H + ++ P AF R LD N +
Sbjct: 223 LDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLL 282
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+TF G+ + L+L+H + S+ P F+ L F L+ L L N L Q+P + L L
Sbjct: 283 EDTFPGLLGLHVLRLAHNALASLRPRTFKDLHF-LEELQLGHNRLRQLPEKAFEGLGQLE 341
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL 239
++ L+ N+I +I +F L N+ + LS N L L + FRGL ++L L
Sbjct: 342 VLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHL 393
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIR 126
L+ L + ++ +R + E F G+ ++ L L+ +I I AF L + +R
Sbjct: 316 LEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLR 375
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
N+ E F G+ + +L L H + + + F L L+ L L++N LE + ++L L
Sbjct: 376 NLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLS-GLRRLFLKDNGLEAIDEQSLWGLA 434
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
L +DL+ N++ +P F L L L LS N L+
Sbjct: 435 ELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRNRLS 471
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIRNIN 129
L ++++ + + E+TF G+ + L+L+H + S+ P F+ L + +R +
Sbjct: 271 LDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLP 330
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E F G+ ++ L L+ +I I AF L F + +NL N L +P + R L L
Sbjct: 331 EKAFEGLGQLEVLALNDNQIQEIKAGAFLGL-FNVAVMNLSGNCLRNLPEQVFRGLGKLH 389
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGL 231
+ L + +G++ +F+ L+ L L L DN L + + S GL
Sbjct: 390 SLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGL 433
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 41/164 (25%), Positives = 76/164 (46%)
Query: 80 LLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI 136
++ ++ + +RN+ E F G+ + +L L H + + + F L +R + +N I
Sbjct: 366 VMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAI 425
Query: 137 FIKNLQ-LSHCRINSITPNAFRHLE---FT----LKHLNLQENDLEQVPVETLRHLKNLT 188
++L L+ +T N HL F L++L L N L +P + L L+
Sbjct: 426 DEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTF 485
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
+D+S N++ +P+ + L L L L +N+L + GLE
Sbjct: 486 WLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLRTFVPQPLGLE 529
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 168 (64.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 53/175 (30%), Positives = 90/175 (51%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNIN 129
L I+ + I + E+ F F++ LQL+ ++ I P A L + +R +
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVP 121
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
+G+ +++L+L I S+ ++F L L+HL L +N L +VPV L +L L
Sbjct: 122 SEAIHGLSALQSLRLDANHITSVPEDSFEGL-VQLRHLWLDDNSLTEVPVRPLSNLPTLQ 180
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
+ L+ N I IPD +F+ L++LV L L +N + +L ++ F GL+ L L N
Sbjct: 181 ALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 168 (64.2 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 53/175 (30%), Positives = 90/175 (51%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNIN 129
L I+ + I + E+ F F++ LQL+ ++ I P A L + +R +
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVP 121
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
+G+ +++L+L I S+ ++F L L+HL L +N L +VPV L +L L
Sbjct: 122 SEAIHGLSALQSLRLDANHITSVPEDSFEGL-VQLRHLWLDDNSLTEVPVRPLSNLPTLQ 180
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
+ L+ N I IPD +F+ L++LV L L +N + +L ++ F GL+ L L N
Sbjct: 181 ALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 167 (63.8 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 53/174 (30%), Positives = 91/174 (52%)
Query: 83 INNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNINEN 131
+NN I + E+ F F++ L+L+ ++ I P A L + ++ +
Sbjct: 1 MNN--ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSE 58
Query: 132 TFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLI 190
G+ +++L+L I S+ ++F L L+HL L +N L +VPV+ L +L L +
Sbjct: 59 AIRGLSALQSLRLDANHITSVPEDSFEGLT-QLRHLWLDDNSLTEVPVQPLSNLPTLQAL 117
Query: 191 DLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YKN 242
L+ NKI IPD +F+ L++LV L L +N + +L ++ F GL+ L L Y N
Sbjct: 118 TLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNN 171
Score = 133 (51.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 47/171 (27%), Positives = 85/171 (49%)
Query: 80 LLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDA-------IRNINENT 132
L ++ NSA N+++ + + I+ + R ++T HL++ I +I+ N
Sbjct: 219 LSFVGNSAFHNLSD--LHSLVIRGASMVQ-RFPNLTGTV--HLESLTLTGTKISSISSNL 273
Query: 133 FNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLID 191
++ L LS+ I + P+ F + L+ ++LQ N + Q+ T + L +L ++D
Sbjct: 274 CQEQKMLRTLDLSYNNIKDL-PS-FNGC-YALEEISLQRNQIHQIKEGTFQGLTSLRILD 330
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242
LS+N I +I D +F+ L ++ L +S N LT + GL N L L N
Sbjct: 331 LSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTE--GLNGLNQLKLVGN 379
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/171 (26%), Positives = 81/171 (47%)
Query: 79 DLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITP-NAFR--HLDA--IRNINENTF 133
DL +I+ A+ + E + ++N QL +I +A + LDA I ++ E++F
Sbjct: 27 DLSFIHPKALSGLKE--LKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSF 84
Query: 134 NGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDL 192
G+ +++L L + + +L TL+ L L N + +P +L +L ++ L
Sbjct: 85 EGLTQLRHLWLDDNSLTEVPVQPLSNLP-TLQALTLALNKISSIPDFAFTNLSSLVVLHL 143
Query: 193 SKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
NKI + F L+NL TL L+ NNL + + + L L + NS
Sbjct: 144 HNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNS 194
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 45/184 (24%), Positives = 90/184 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFN 134
L +L + N+ ++ + G+ +++L+L I S+ ++F L +R++ ++N+
Sbjct: 42 LKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLT 101
Query: 135 GIFIKNLQ---------LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ ++ L L+ +I+SI AF +L +L L+L N ++ + L
Sbjct: 102 EVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLS-SLVVLHLHNNKIKSLGQHCFDGLD 160
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYKN-- 242
NL +DL+ N +G+ P + L +L L N++++ + +F G L + LY N
Sbjct: 161 NLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 219
Query: 243 SFRG 246
SF G
Sbjct: 220 SFVG 223
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 127 (49.8 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LY 224
L L+ N++EQ+ E +RHL++LT +DLS N+I + + +F+ L L TL +S N L L
Sbjct: 771 LYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQ 830
Query: 225 KNSFRGLELNNNLTLYKN 242
+++ GL L+L+ N
Sbjct: 831 RHALSGLNNLRVLSLHGN 848
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 38/144 (26%), Positives = 68/144 (47%)
Query: 109 CRINSITPNAFRHLDAIRNINENTFNGIFIK------NLQLSHCRINSITPNAFRHLEFT 162
C + P+ R D I + E + + + L+L I + P +F
Sbjct: 313 CGAENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFR-R 371
Query: 163 LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
L+ ++L N++ ++ + L LK LT + L NKI +P F L +L L L+ N ++
Sbjct: 372 LRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEIS 431
Query: 223 -LYKNSFRGLELNNNLTLYKNSFR 245
+ K++FR L + L+LY N+ +
Sbjct: 432 CIRKDAFRDLHSLSLLSLYDNNIQ 455
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 43/129 (33%), Positives = 70/129 (54%)
Query: 128 INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
I E F + ++ LQL+ +I++I N+F+ L +L+ L L N L+ +P + +
Sbjct: 115 IYETDFQRLTKLRMLQLTDNQIHTIERNSFQDL-VSLERLRLNNNRLKAIPENFVTSSAS 173
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGL-EL------NNNLT 238
L +D+S N I + F +L +L+L +N +T L +++F+GL EL NNNLT
Sbjct: 174 LLRLDISNNVITTVGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLT 233
Query: 239 -LYKNSFRG 246
L N F G
Sbjct: 234 SLPHNIFGG 242
Score = 92 (37.4 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 26 QCPWEDESESELQSTCICSYNTANELSIQCN-DLTNYPLFKATLNKHVNTKVPL---DLL 81
+C W DE +L C ++ C+ + T L K + +PL +LL
Sbjct: 523 KCSW-DELRMKLSGEC----RMDSDCPAMCHCEGTTVDCTGRGL-KEIPRDIPLHTTELL 576
Query: 82 YINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFR---HL-------DAIRNINE 130
+N R ++ F + + L+L ++ I PNAF H+ + I+ I+
Sbjct: 577 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISN 636
Query: 131 NTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
F G+ +K L L +I+ + P +F HL +L LNL N
Sbjct: 637 KMFLGLHQLKTLNLYDNQISCVMPGSFEHLN-SLTSLNLASN 677
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 162 (62.1 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 52/176 (29%), Positives = 90/176 (51%)
Query: 81 LYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAI-----------RNIN 129
L++ N+ I + +F G + L L +++I P FRHL A+ R++
Sbjct: 62 LFLQNNLIGALRPGSF-GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLE 120
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
+TF G+ +++L L C+++S+ FR L +L++L LQEN L + + L NL+
Sbjct: 121 PDTFQGLERLQSLHLYRCQLSSLPGTIFRGL-VSLQYLYLQENSLVHLQDDLFADLANLS 179
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+ L N++ + + F L +L L L N L +++ +FRGL L L+ NS
Sbjct: 180 HLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNS 235
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 45/162 (27%), Positives = 82/162 (50%)
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI 128
+H+ LDL +N +R++ +TF G+ +++L L C+++S+ FR L +++ +
Sbjct: 100 RHLQALEELDLG--DNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYL 157
Query: 129 --NENTF----NGIFIKNLQLSHC-----RINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
EN+ + +F LSH R+ +T + FR L +L L L N L+ V
Sbjct: 158 YLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG-SLDRLLLHGNRLQGVH 216
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
R L LT++ L N + +P ++ + L +L L+L+ N
Sbjct: 217 RAAFRGLGRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 258
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 164 (62.8 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 49/146 (33%), Positives = 76/146 (52%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L LY++++ I NI+EN FNGI +K L LS RI+ N FR + N+
Sbjct: 87 LTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFR---PVTNL-------- 135
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
+NL LS+ +++S+ FR L L L+L+ N L +PV + +NL L+DL N+
Sbjct: 136 --RNLDLSYNQLHSLGSEQFRGLRKLLS-LHLRSNSLRTIPVRIFQDCRNLELLDLGYNR 192
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT 222
I + + F+ + L L L N +
Sbjct: 193 IRSLARNVFAGMIRLKELHLEHNQFS 218
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/185 (29%), Positives = 94/185 (50%)
Query: 72 VNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL-------- 122
+N+ L + +NN I + E+ F F++ L+L+ ++ I P A L
Sbjct: 9 LNSLPALRDISMNN--ITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTL 66
Query: 123 --DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
+ ++ + G+ +++L+L I S+ ++F L L+HL L +N L +VPV
Sbjct: 67 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLA-QLRHLWLDDNSLMEVPVH 125
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLT 238
L +L L + L+ NKI IPD +F+ L++LV L L +N + L ++ F GL+ L
Sbjct: 126 PLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLD 185
Query: 239 L-YKN 242
L Y N
Sbjct: 186 LNYNN 190
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/171 (26%), Positives = 82/171 (47%)
Query: 79 DLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITP-NAFR--HLDA--IRNINENTF 133
DL +I+ A+ + E + ++N QL +I +A + LDA I ++ E++F
Sbjct: 46 DLSFIHPKALSGLKE--LKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSF 103
Query: 134 NGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDL 192
G+ +++L L + + + +L TL+ L L N + +P +L +L ++ L
Sbjct: 104 EGLAQLRHLWLDDNSLMEVPVHPLSNLP-TLQALTLALNKISSIPDYAFTNLSSLVVLHL 162
Query: 193 SKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
NKI + F L+NL TL L+ NNL + + + L L + NS
Sbjct: 163 HNNKIKNLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNS 213
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 80 LLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDA-------IRNINENT 132
L ++ NSA N+++ + + I+ + + ++T HL++ I +I+ N
Sbjct: 238 LSFVGNSAFHNLSD--LHSLVIRGASMVQ-QFPNLTGTV--HLESLTLTGTKISSISSNL 292
Query: 133 FNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLID 191
++ L LS+ I + H L+ ++LQ N + Q+ T + L +L ++D
Sbjct: 293 CQEQKMLRTLDLSYNSIKDLPSFDGCH---ALEEISLQRNQIHQIKEGTFQGLVSLRILD 349
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242
LS+N+I +I + +F+ L ++ L +S N LT + GL N L L N
Sbjct: 350 LSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTE--GLSGLNQLKLVGN 398
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 45/184 (24%), Positives = 90/184 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFN 134
L +L + N+ ++ + G+ +++L+L I S+ ++F L +R++ ++N+
Sbjct: 61 LKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLM 120
Query: 135 GI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ ++ L L+ +I+SI AF +L +L L+L N ++ + L
Sbjct: 121 EVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLS-SLVVLHLHNNKIKNLGQHCFDGLD 179
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYKN-- 242
NL +DL+ N +G+ P + L +L L N++++ + +F G L + LY N
Sbjct: 180 NLETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 238
Query: 243 SFRG 246
SF G
Sbjct: 239 SFVG 242
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 162 (62.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 64/220 (29%), Positives = 99/220 (45%)
Query: 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF 96
LQ CS EL DL+ L +N V + L LY+NN+ I I F
Sbjct: 204 LQHQLFCSLTELKEL-----DLSGNALKGIKINIFVKLQ-KLQKLYLNNNQINAIAPRAF 257
Query: 97 NGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNINENTFNGI-FIKNLQLS 144
G+ ++ L LSH R+ S+ + F L ++I ++ TF + F++ LQL
Sbjct: 258 MGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLG 317
Query: 145 HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDS 204
H RI S+ F L L+ L+L N L+ + L N+ ++ LS N I +P+
Sbjct: 318 HNRIWSLAERTFDGLG-QLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYV 376
Query: 205 FSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNS 243
F + L +L L + L+ + N+F L L L N+
Sbjct: 377 FEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNA 416
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 55/180 (30%), Positives = 85/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSIT--PN-AFR--------HLD--A 124
L++L +NN+ +++I F G++ N+ + H N I P F HL+
Sbjct: 335 LEVLSLNNNQLQDIKAGAFLGLY--NVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSC 392
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
+ I NTF+ + ++ L L H I++I +FR L L+ L+L+ N L + +
Sbjct: 393 LSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLE-LDLKHNRLSHLSPQLFVG 451
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNS-------FRGLELNNN 236
L NL + LS N+I I ++FS L L L LS N L N+ R L L NN
Sbjct: 452 LSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNN 511
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 80 LLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIRNI 128
+++++ + I+ + E F G+ + +L L H ++ I N F L +AI I
Sbjct: 361 VMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTI 420
Query: 129 NENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
+ +F + + L L H R++ ++P F L L++L L N + + T L+ L
Sbjct: 421 EDQSFRELHELLELDLKHNRLSHLSPQLFVGLS-NLEYLFLSFNQIMDISQNTFSPLRRL 479
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSF 228
+DLS N++ + + + L NL L L +N+L + F
Sbjct: 480 FWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLETFSVGF 520
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 49/177 (27%), Positives = 83/177 (46%)
Query: 81 LYINNSAIRNINENTFNGIFIKNLQLSHCRINSIT--PN-AFRHLDAIRNI----NENTF 133
L +NN+ + E F G+ NL + NS+ P+ F L +R + N+ +
Sbjct: 146 LSLNNNLFSKVEEGLFAGL--SNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPY 203
Query: 134 --NGIF-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ +F +K L LS + I N F L+ L+ L L N + + +K+
Sbjct: 204 LQHQLFCSLTELKELDLSGNALKGIKINIFVKLQ-KLQKLYLNNNQINAIAPRAFMGMKS 262
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +DLS N++ + +D+F L +L L+LS N++T L +F+ L+ L L N
Sbjct: 263 LRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHN 319
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAI--RNINENTFN 134
LD L + +S + + ++ F+G+ + +L L R+ + P+ F H + ++N N F+
Sbjct: 95 LDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFS 154
Query: 135 ----GIF--IKNLQLSHCRINSIT--PNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
G+F + NL + NS+ P+ H L+ L L N L + + L
Sbjct: 155 KVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTE 214
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +DLS N + I + F L L L L++N + + +F G++ L L N
Sbjct: 215 LKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHN 271
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 162 (62.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/172 (29%), Positives = 88/172 (51%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR----------NIN 129
L ++ + +R++ N F + ++ L L H + ++ P AF + A+R ++
Sbjct: 227 LDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLL 286
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E++F G+ + L+LSH + + P F+ L F L+ L L N L Q+P E L L
Sbjct: 287 EDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHF-LEELQLGHNRLRQLPEEAFAGLGQLE 345
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
++ L+ N++ ++ F L NL L LS N L L + +F+GL ++L L
Sbjct: 346 VLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHL 397
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 40/167 (23%), Positives = 81/167 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIR---------- 126
L +L ++++ +R++ E F G+ + +L L + + P AF L +R
Sbjct: 368 LAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIA 427
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+++E + G+ + L L+ ++ + F+ L L++L L N L +P + L L+
Sbjct: 428 DVDERSLGGLAELLELDLTANQLTHLPGRLFQDLG-RLEYLLLARNRLSALPADALGPLQ 486
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
+D+S N++ +P + + L+ L L L +N+L + GLE
Sbjct: 487 RTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTFAPQPPGLE 533
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 161 (61.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 46/132 (34%), Positives = 73/132 (55%)
Query: 116 PNAFRHLDAIRN----INENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQE 170
P+ R LD +N IN + F+ ++ L+L+ I++I P AF +L + L+ L L+
Sbjct: 67 PSETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNL-YGLQTLGLRS 125
Query: 171 NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFR 229
N L+ + + L NLT +D+S+NKI + D F L NL +L++ DN+L + +F
Sbjct: 126 NKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFH 185
Query: 230 GLELNNNLTLYK 241
GL LTL K
Sbjct: 186 GLSSLEQLTLEK 197
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 57/236 (24%), Positives = 113/236 (47%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNK 70
+ +++L ++ G + CP S C C+ E S+ C+ K ++
Sbjct: 23 ILILMLGTVLSGSATGCP----------SRCECN---VQERSVLCHR-------KKLMS- 61
Query: 71 HVNTKVPLD--LLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRN 127
V +P + LL ++ + I+ IN + F+ ++ L+L+ I++I P AF +L ++
Sbjct: 62 -VPEGIPSETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQT 120
Query: 128 IN--ENTFN----GIF--IKNL---QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQV 176
+ N G+F + NL +S +I + F+ L + L+ L + +NDL +
Sbjct: 121 LGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDL-YNLRSLEVGDNDLVFI 179
Query: 177 PVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGL 231
L +L + L K + +P ++F+ L++LVTL+L + N+ ++ SF+ L
Sbjct: 180 SHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRL 235
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 50/185 (27%), Positives = 81/185 (43%)
Query: 63 LFKATLNKHVNTKVPLDLLYINNSAI----RNINENTFNGIFIKNLQLSHCRINSITPNA 118
L + TL K T VP + +S + RN+N N+ K L R+ +
Sbjct: 190 LEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLY----RLKVLEIAN 245
Query: 119 FRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
+ +LD + N G+ + +L +++ + SI A RHL + L+ LN+ N ++ +
Sbjct: 246 WPYLDTMTT---NCLYGLNLTSLTITNANLTSIPYLALRHLVY-LRFLNMSYNPIQMIEG 301
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNL 237
L L L + L ++ I SF LN L L +S N LT + S F + L
Sbjct: 302 NRLHDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSVGNLETL 361
Query: 238 TLYKN 242
L+ N
Sbjct: 362 ALHDN 366
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 53/176 (30%), Positives = 90/176 (51%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNIN 129
L I+ + I + E+ F F++ LQL+ ++ I P A L + ++ +
Sbjct: 62 LDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVP 121
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
G+ +++L+L I S+ ++F L L+HL L +N L +VPV L +L L
Sbjct: 122 SEAIRGLSALQSLRLDANHITSVPEDSFEGL-VQLRHLWLDDNILTEVPVRPLSNLPTLQ 180
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YKN 242
+ L+ N I IPD +F+ L++LV L L +N + +L ++ F GL+ L L Y N
Sbjct: 181 ALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYNN 236
>UNIPROTKB|F1MG02 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9913
"Bos taurus" [GO:0070052 "collagen V binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214 GO:GO:0030198
GO:GO:0008201 GO:GO:0010811 GeneTree:ENSGT00700000104006
GO:GO:0005614 IPI:IPI00692442 OMA:AVWSPKP EMBL:DAAA02024048
EMBL:DAAA02024049 Ensembl:ENSBTAT00000015726 Uniprot:F1MG02
Length = 679
Score = 161 (61.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 48/128 (37%), Positives = 73/128 (57%)
Query: 123 DAIRNINENTFNGIFIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
++I +I + FNG+ ++ L LS I S I P AF+ L+ L LN+ N+L +P E
Sbjct: 334 NSITSIPDEAFNGLNLERLDLSKNNITSSGIGPKAFKFLK-NLMRLNMDGNNLVTIPSEL 392
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK-NS--FRGLELNNNL 237
L+ L + ++NK+ I ++S S LN LVTL+L NNL+ NS F+ L+ + L
Sbjct: 393 PSTLEELKI---NENKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLAFKPLKSLSYL 449
Query: 238 TLYKNSFR 245
L +N FR
Sbjct: 450 RLGRNKFR 457
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 63/208 (30%), Positives = 92/208 (44%)
Query: 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF 96
L S C SY T + +S DLT P A + + L+L I+NS I +I + F
Sbjct: 297 LPSMCSLSYKTISCISA---DLTQIPPLTAP---EITS---LEL--IDNS-ITSIPDEAF 344
Query: 97 NGIFIKNLQLSHCRINS--ITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPN 154
NG+ ++ L LS I S I P AF+ L + +N +G NL I S P+
Sbjct: 345 NGLNLERLDLSKNNITSSGIGPKAFKFLKNLMRLN---MDG---NNL----VTIPSELPS 394
Query: 155 AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDS--FSTLNNLV 212
TL+ L + EN L+ + E+L L L ++L N + + +S F L +L
Sbjct: 395 -------TLEELKINENKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLAFKPLKSLS 447
Query: 213 TLKLSDNNLTLYKN----SFRGLELNNN 236
L+L N + S L L NN
Sbjct: 448 YLRLGRNKFRIIPQGLPASIEELYLENN 475
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 160 (61.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF------RHL----DAIR 126
L LY++N+ I + F + + L L + ++P F R L + I
Sbjct: 247 LQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHIT 306
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++ +NTF+ + ++ L LSH ++ I+P AF L L+ L+L N L+ + R L
Sbjct: 307 SLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLT-NLRELSLHTNALQDLDSNVFRSLA 365
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
NL I L N++ ++P F+ +N L T++L +NNL L F L L LY N +
Sbjct: 366 NLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRLYDNPW 425
Query: 245 R 245
R
Sbjct: 426 R 426
Score = 152 (58.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 53/170 (31%), Positives = 81/170 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L+ L ++N+ + I F+ ++ LQL + SI AF HL + +N
Sbjct: 127 LESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLG----- 181
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
+N +H ++P F+HL L+ L L EN L +P+ T L NL + L +N+
Sbjct: 182 --RN-SFTH-----LSPRLFQHLG-NLQVLRLHENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
IG + F NL L LS+N+++ L F L N LTL+ NS R
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLR 282
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 51/175 (29%), Positives = 84/175 (48%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN--- 134
L + N+ I + EN F I + L++ +++I P AFR+L ++R ++ N
Sbjct: 58 LQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLP 117
Query: 135 -GIF--IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
+F + NL+ LS+ ++ I P F L+ L L N+LE +P E HL LT
Sbjct: 118 IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFS-NLRELQLHGNNLESIPEEAFDHLVGLT 176
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
++L +N + F L NL L+L +N L+ + +F L L L +N
Sbjct: 177 KLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQEN 231
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIR--NINENTFN--- 134
L ++ + + +I E F+ + + L L ++P F+HL ++ ++EN +
Sbjct: 154 LQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIP 213
Query: 135 -GIF--IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
G F + NLQ L +I +++P F H L+ L L N + Q+P L L
Sbjct: 214 MGTFDALGNLQELALQENQIGTLSPGLF-HNNRNLQRLYLSNNHISQLPPGIFMQLPQLN 272
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+ L N + ++ F + NL L L +N++T L N+F L L L N
Sbjct: 273 KLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHN 327
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 160 (61.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 43/119 (36%), Positives = 67/119 (56%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
+++IN F ++ + LS I ++ P AF +L F L+ L L+ N L+ VP+
Sbjct: 69 LKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNL-FNLRSLRLKGNRLKLVPLGVFTG 127
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L+NL +L++ DN+L + +F GL LTL K
Sbjct: 128 LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAI-----RNINEN 131
L L + ++ + I+ F+G+ ++ L L C + ++ A HL ++ +++N N
Sbjct: 155 LKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNIN 214
Query: 132 T-----FNGIF-IKNLQLSHCRINSITP-NAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
F +F +KNL++ + + + P N+ L T L++ +L VP +HL
Sbjct: 215 NMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLNLT--SLSITNTNLSTVPFLAFKHL 272
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
LT ++LS N I I FS L L L + L T+ +SF+GL L + +N
Sbjct: 273 VYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 60/251 (23%), Positives = 116/251 (46%)
Query: 5 FSPFHLVTLILLTALIQGGSAQCPWEDESESELQS-TC----ICSYNTANELSIQCNDLT 59
+ PF + ++LL + G + CP E ++ +S +C + + + + DL+
Sbjct: 9 WQPFLGLAVVLL---LMGSTIGCPARCECSAQNKSVSCHRRRLLAIPEGIPIETKILDLS 65
Query: 60 NYPLFKATLNKHVNTKVPL-DLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPN 117
L ++N PL + + ++++ I N+ FN +F +++L+L R+ +
Sbjct: 66 KNRL--KSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLG 123
Query: 118 AFRHLDAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHL 166
F L + +I+EN F + +K+L++ + I+ AF L +L+ L
Sbjct: 124 VFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGL-LSLEQL 182
Query: 167 NLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT--LY 224
L++ +L VP E L HL++L + L I +P +F L +L L++ L +
Sbjct: 183 TLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMP 242
Query: 225 KNSFRGLELNN 235
NS GL L +
Sbjct: 243 ANSLYGLNLTS 253
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 71/257 (27%), Positives = 117/257 (45%)
Query: 4 HFSPFHLVTL--ILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNY 61
H SP L ++L AL + GS P + C C + LS C++L
Sbjct: 2 HSSPLLLALCLCVVLCALARAGSD--PQPGPGRPACPAPCHCQEDGIM-LSADCSELG-- 56
Query: 62 PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFR 120
L + + T LDL +NN + + F+ + F++ L+LS ++ I AF
Sbjct: 57 -LSEVPADLDPLTAY-LDLS-MNN--LTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFS 111
Query: 121 HLDAIR--NINENTFNGI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQ 169
L +++ + N GI +++L+L I+ + +F L +L+HL L
Sbjct: 112 GLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLS-SLRHLWLD 170
Query: 170 ENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSF 228
+N L ++PV L +L L + L+ N+I IPD +F L +LV L L +N + + +SF
Sbjct: 171 DNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSF 230
Query: 229 RGLELNNNLTLYKNSFR 245
GL L L N +
Sbjct: 231 EGLHNLETLDLNYNELQ 247
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ L+LSH +I + P+ R + L+ + LQ N + ++ +T L +L +DLS N I
Sbjct: 354 LRILELSHNQIEEL-PSLHRCQK--LEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAI 410
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRG----LELNNNLTL 239
I ++FSTL +LV L L+DN LT + G L+L NL L
Sbjct: 411 RAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLMHLKLKGNLAL 456
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 42/180 (23%), Positives = 83/180 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L+ L ++ + + +I F+G+ +K L L ++ I A L +++++
Sbjct: 92 LEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
E +F G+ +++L L + I A +L L+ + L N + +P ++L
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP-ALQAMTLALNRIRHIPDYAFQNLT 210
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+L ++ L N+I + SF L+NL TL L+ N L + + R L L + N+ +
Sbjct: 211 SLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIK 270
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 83 INNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNINEN 131
+NN I + E+ F +++ L+L+ ++ I P A L + ++ +
Sbjct: 149 MNN--ITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPNE 206
Query: 132 TFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLI 190
G+ +++L+L I ++ ++F L L+HL L +N L +VP+ L +L +L +
Sbjct: 207 AIRGLSGLQSLRLDANHITAVPKDSFEGL-VQLRHLWLDDNSLTEVPIHPLSNLPSLQAL 265
Query: 191 DLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YKN 242
L+ NKI IPD +F+ L++LV L L +N + T+ K+ F GL+ L L Y N
Sbjct: 266 TLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNN 319
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 80 LLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
L ++ NSA +N+++ + + I+ + F +L N+ T G I
Sbjct: 367 LSFVGNSAFQNLSD--LHSLVIRGASMVQ---------RFPNLTGTVNLESLTLTGTKIN 415
Query: 140 NLQLSHC------RINSITPNAFRHL-EFT----LKHLNLQENDLEQVPVETLRHLKNLT 188
++ ++ C R ++ N + L FT L+ ++LQ N + ++ +T + L +L
Sbjct: 416 SIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEISLQHNQIHEITDDTFQGLSSLR 475
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
++DLS+N+I KI ++F+T+ +V L LS N LT GL N L L NS
Sbjct: 476 ILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTE--GLSGLNQLKLAGNS 528
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 158 (60.7 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 54/179 (30%), Positives = 96/179 (53%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------E 130
L++L + + + ++ F + ++ L LS +I+S++ F++ +R ++
Sbjct: 148 LEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIP 207
Query: 131 NTFNGIF--IKNLQLSHCRINSI---TPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
N +GIF + +LQ + R N I TP +F +LK L L++N LE++ L
Sbjct: 208 NLPDGIFTHLDHLQELNLRSNLIRVLTPGSF---PASLKTLILKKNLLEKLTNAVFHTLH 264
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
+T +DLS+N + ++P D F L +L TL LS+N + TL + F+GL ++ L KNS
Sbjct: 265 YITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNS 323
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCR 110
LS+Q N + N P + H++ L L + ++ IR + +F +K L L
Sbjct: 199 LSLQANKIPNLP---DGIFTHLDH---LQELNLRSNLIRVLTPGSFPAS-LKTLILKKNL 251
Query: 111 INSITPNAFRHLDAIR--NINENTF---------NGIFIKNLQLSHCRINSITPNAFRHL 159
+ +T F L I ++++N+ N I ++ L LS RI+++ + F+ L
Sbjct: 252 LEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGL 311
Query: 160 EFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
F++K + LQ+N L V L+ +L L+DLS N + IP F L+ +L N
Sbjct: 312 -FSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRGN 370
Score = 123 (48.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 78 LDLLYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
LDL + + I +++ F N ++ L L +I ++ F HLD ++ +N N
Sbjct: 175 LDLSF---NQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIR 231
Query: 135 ----GIF---IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
G F +K L L + +T F L + + +L+L +N L +VP + ++L +L
Sbjct: 232 VLTPGSFPASLKTLILKKNLLEKLTNAVFHTLHY-ITYLDLSQNSLTEVPADLFQNLISL 290
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+DLS+N+I + F L ++ ++ L N+L
Sbjct: 291 ETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSL 324
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 59/178 (33%), Positives = 92/178 (51%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPN---AFRHLD----AIRNINE 130
L +Y+NN+ + + + +L L H +I S+ + A+ L+ ++ NI E
Sbjct: 94 LQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITE 153
Query: 131 --NT-F-NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
NT F +G IK L L+ RI ++ AF L +L L L +N + Q+PV + L
Sbjct: 154 VRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFK-LPR 212
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
LT +DL++N+I I +F LN+L LKL NN++ L +F GL + L L NS
Sbjct: 213 LTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNS 270
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF--------RHLD- 123
K+P L L +N + IR I TF G+ ++ L+L I+ +T AF HL+
Sbjct: 209 KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEY 268
Query: 124 -AIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
++ +N + G+ + L LS+ I I + + L L L N+L ++ E+L
Sbjct: 269 NSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQ-KLHELVLSFNNLTRLDEESL 327
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNS--FRGLELNNNL 237
L +L+++ LS N I I + +F L +L L L N + T+ S F GL+ + L
Sbjct: 328 AELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKL 387
Query: 238 TLYKNSFR 245
TL+ N +
Sbjct: 388 TLFGNKIK 395
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 159 (61.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 42/119 (35%), Positives = 67/119 (56%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
++++N F ++ + LS I ++ P AF +L F L+ L L+ N L+ VP+
Sbjct: 69 LKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNL-FNLRSLRLKGNRLKLVPLGVFTG 127
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NLT +D+S+NKI + D F L+NL +L++ DN+L + +F GL LTL K
Sbjct: 128 LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAI-----RNINEN 131
L L + ++ + I+ F+G+ ++ L L C + ++ A HL ++ +++N N
Sbjct: 155 LKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNIN 214
Query: 132 T-----FNGIF-IKNLQLSHCRINSITP-NAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
F +F +K+L++ + + + P N+ L T L++ +L VP +HL
Sbjct: 215 NMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLNLT--SLSVTNTNLSTVPFLAFKHL 272
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
LT ++LS N I I FS L L L + L T+ +SF+GL L + +N
Sbjct: 273 VYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQN 331
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 58/252 (23%), Positives = 116/252 (46%)
Query: 3 SHFSPFHLVTLILLTALIQGGSAQCPWEDESESELQS-TC----ICSYNTANELSIQCND 57
S + PF + ++L+ G + CP E ++ +S +C + + + + D
Sbjct: 7 SCWQPFLGLAVVLI---FMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILD 63
Query: 58 LTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITP 116
L+ L + ++ + L+ + ++++ I N+ FN +F +++L+L R+ +
Sbjct: 64 LSKNRLKSVNPEEFISYPL-LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPL 122
Query: 117 NAFRHLDAIR--NINENT--------FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKH 165
F L + +I+EN F + +K+L++ + I+ AF L +L+
Sbjct: 123 GVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGL-LSLEQ 181
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT--L 223
L L++ +L VP E L HL++L + L I +P +F L +L L++ L +
Sbjct: 182 LTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMM 241
Query: 224 YKNSFRGLELNN 235
NS GL L +
Sbjct: 242 PANSLYGLNLTS 253
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 121 (47.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L L++LTLIDLS N IG + + +FS +++L TL LS N L
Sbjct: 554 LYLEGNHLTAVPRE-LSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIP 612
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 613 IHAFDGLRSLRVLTLHGN 630
Score = 94 (38.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ LS+ I +T F ++ L L L N L +P+ L++L ++ L N I +
Sbjct: 577 IDLSNNSIGVLTNYTFSNMSH-LSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSV 635
Query: 201 PDDSFSTLNNLVTLKLSDNNL 221
P+ SFS L +L L L N L
Sbjct: 636 PEGSFSDLTSLSHLALGTNPL 656
Score = 90 (36.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 30/110 (27%), Positives = 57/110 (51%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I+ + E F+G ++ L L+ ++ ++ FR L +++
Sbjct: 352 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRS 411
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
++ +TF G+ ++ L L RI +ITP AF L +L +NL N
Sbjct: 412 NLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTL-VSLSTINLLSN 460
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I ++ +TF G+ ++ L L RI +ITP AF L ++ IN N FN
Sbjct: 404 LKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFN 463
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 126 (49.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
I ++L I SI AF + LK +++ +N + + + + LK+LT + L NKI
Sbjct: 123 IVEIRLEQNSIKSIPAGAFTQYK-KLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKI 181
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNSFR 245
+IP F L +L L L+ N + + N+F+ L+ N L+LY N +
Sbjct: 182 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ 230
Score = 122 (48.0 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L ++LTLIDLS N IG + + +FS +++L TL LS N L
Sbjct: 574 LYLEGNHLTAVPRE-LSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIP 632
Query: 226 -NSFRGLELNNNLTLYKN 242
+SF GL LTL+ N
Sbjct: 633 IHSFNGLRSLRVLTLHGN 650
Score = 95 (38.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ LS+ I +T F ++ L L L N L +P+ + L++L ++ L N I +
Sbjct: 597 IDLSNNSIGMLTNYTFSNMSH-LSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSV 655
Query: 201 PDDSFSTLNNLVTLKLSDNNL 221
P+ SF+ L +L L L N L
Sbjct: 656 PEGSFNDLTSLSHLALGTNPL 676
Score = 89 (36.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 30/110 (27%), Positives = 57/110 (51%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I+ + E F+G ++ L L+ ++ ++ FR L ++
Sbjct: 371 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRS 430
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
++ +TF G+ ++ L L RI++ITP AF L +L +NL N
Sbjct: 431 NLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTL-VSLSTINLLSN 479
Score = 86 (35.3 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
FRHL TL ++L N + + T ++ +L+ + LS N++ IP SF+ L +L L
Sbjct: 591 FRHL--TL--IDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLT 646
Query: 216 LSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L N+++ + + SF L ++L L N
Sbjct: 647 LHGNDISSVPEGSFNDLTSLSHLALGTN 674
Score = 75 (31.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I ++ +TF G+ ++ L L RI++ITP AF L ++ IN N FN
Sbjct: 423 LKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSNPFN 482
Score = 59 (25.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIFIKNL-QLSHCRINSITPNAFRHLDAIRNIN--ENT 132
V L LL +N + I + NTF + NL L ++ +I+ F L AI+ ++ +N
Sbjct: 193 VSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNP 252
Query: 133 F 133
F
Sbjct: 253 F 253
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 52/181 (28%), Positives = 90/181 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF------RHL----DAIR 126
L LY++N+ I ++ F + + L L + ++P F R L + I
Sbjct: 247 LQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHIT 306
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++ +N F+ + ++ L LSH +++ I+P AF L L+ L+L N L+ + R L
Sbjct: 307 SLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLT-NLRELSLHTNALQDLDGNVFRSLA 365
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
NL + L N++ ++P F+ +N L+T++L +NNL L F L L LY N +
Sbjct: 366 NLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLCELRLYDNPW 425
Query: 245 R 245
R
Sbjct: 426 R 426
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 50/178 (28%), Positives = 83/178 (46%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------ENTF 133
L + N+ ++N+ F + ++ L LS+ ++ I P F ++ + E
Sbjct: 106 LSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIP 165
Query: 134 NGIF-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
G+F + L L + ++P F+HL L+ L L EN L +P+ T L NL
Sbjct: 166 EGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLG-NLQVLRLYENRLSDIPMGTFDALGNLQ 224
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
+ L +N+IG + F NL L LS+N+++ L F L N LTL+ NS +
Sbjct: 225 ELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLK 282
Score = 131 (51.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I + E+ F I + L++ + +I P AFR+L +L+HL+L N L+ +PV +
Sbjct: 65 ITELPEDKFLNISALIALKMEKNELANIMPGAFRNLG-SLRHLSLANNKLKNLPVRLFQD 123
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+ NL + LS N++ +I FS +NL L+L NNL + + F L L L N
Sbjct: 124 VNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNN 183
Query: 243 SF 244
F
Sbjct: 184 GF 185
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 53/206 (25%), Positives = 91/206 (44%)
Query: 49 NELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLS 107
N +S+Q + N + + +K +N L L + + + NI F + +++L L+
Sbjct: 54 NAMSLQ---ILNTHITELPEDKFLNISA-LIALKMEKNELANIMPGAFRNLGSLRHLSLA 109
Query: 108 HCRINSITPNAFRHLDAIRNI--NENTFNGI----F-----IKNLQLSHCRINSITPNAF 156
+ ++ ++ F+ ++ + + + N I F +K LQL + I F
Sbjct: 110 NNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVF 169
Query: 157 RHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216
HL L LNL N + +HL NL ++ L +N++ IP +F L NL L L
Sbjct: 170 DHL-VGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELAL 228
Query: 217 SDNNL-TLYKNSFRGLELNNNLT-LY 240
+N + TL F N NL LY
Sbjct: 229 QENQIGTLSPGLFHN---NRNLQRLY 251
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 47/167 (28%), Positives = 85/167 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIR--NINENTFN 134
L L ++ + + N+ N F + ++ L +SH +I + L + N++ N +
Sbjct: 200 LKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALS 259
Query: 135 ----GIFIKN-----LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
G F +N L LSH +I + N+FR + F L+ L L +N L + T +
Sbjct: 260 ELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRF-LRRLFLSDNVLTDIGRGTFGSIA 318
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGL 231
+ IDL++N++ KI F+ +N + L L++NN+T + KNSF+ +
Sbjct: 319 RIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDI 365
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 51/223 (22%), Positives = 104/223 (46%)
Query: 33 SESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNIN 92
S +E+ C + + + N++++ +F T L + ++++++R I
Sbjct: 448 SITEIPKNCFPKLYELHTIDVSHNNISS--IFNGVFQ----TLFSLRSIDLSHNSMREIK 501
Query: 93 ENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGIF-----IKNLQLS 144
+TF + + + LSH + S+ + L ++R + N N +F + L S
Sbjct: 502 SSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFS 561
Query: 145 HCRINSITPNAFRHLEFTLKHLNLQENDL-EQVPVETLRHLKNLTLIDLSKNKIGKIPDD 203
H R+ +I P+ + +L +L+L N L + + E+ L + + L N I + P D
Sbjct: 562 HNRLTNI-PSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKD 620
Query: 204 SFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
+ + ++ L L L +NN+T L +++F L + L LY N +
Sbjct: 621 AVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVK 663
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/165 (28%), Positives = 81/165 (49%)
Query: 66 ATLNKHVNTKVPLDLLY--INNSAIRNINENTFNGIF---IKNL-QLSHCRINSITPNAF 119
A VN V LDL + + N + R+ +E TF F NL L+ I ++T
Sbjct: 383 AAFENCVNITV-LDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKV 441
Query: 120 RHL--DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQV 176
+ ++I I +N F ++ + + +SH I+SI F+ L F+L+ ++L N + ++
Sbjct: 442 LNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTL-FSLRSIDLSHNSMREI 500
Query: 177 PVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
T L L +DLS N++ + S + L +L L L++N L
Sbjct: 501 KSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQL 545
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 78 LDLLYINNSA--IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFN 134
L LL +N S+ I+ + + F G+ ++NL LS NS+T LD N +
Sbjct: 674 LQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLS---FNSLTK-----LD---NKTNGVLD 722
Query: 135 GIF-IKNLQLSHCRINSITPNAF---RHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLI 190
+ ++ L LSH RI+ +T F +++ + L++LNL N + + + K L +
Sbjct: 723 DLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRL 782
Query: 191 DLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLT 238
D+S N+I + S +L +L +S N L+ K+ +L NL+
Sbjct: 783 DVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLS 830
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRH------LDA----IRN 127
++LL + + I I +N+F I+ + +SH + I AF + LD + N
Sbjct: 344 VELLDLAENNITKIEKNSFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLAN 403
Query: 128 INENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ +F+ F QLS+ + ++ +++ LK LN N + ++P L
Sbjct: 404 FSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMT-GLKVLNASYNSITEIPKNCFPKLYE 462
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRG 230
L ID+S N I I + F TL +L ++ LS N++ K+S G
Sbjct: 463 LHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFG 506
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 57/229 (24%), Positives = 101/229 (44%)
Query: 44 SYNTANELS-IQCNDLTNYPLFKATLNKHVNTKVPLDL---LY-INNSAIRNIN-ENTFN 97
SYN L+ I ++T + A+ N T++P + LY ++ + + N + FN
Sbjct: 421 SYNNLTNLAQIPIQNMTGLKVLNASYNSI--TEIPKNCFPKLYELHTIDVSHNNISSIFN 478
Query: 98 GIF-----IKNLQLSHCRINSITPNAFRHLDAIRNI----NE--NTFNGIFIKNLQLSHC 146
G+F ++++ LSH + I + F L + + NE + G K L
Sbjct: 479 GVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQL 538
Query: 147 RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK-IPDDSF 205
+N+ L +L L N L +P T + +L +DLS N++G + +SF
Sbjct: 539 YLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESF 598
Query: 206 STLNNLVTLKLSDNNLT-------LYKNSFRGLEL-NNNLTLYKNSFRG 246
+ L + LKL +N ++ ++ + L L NNN+T + S G
Sbjct: 599 TGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFG 647
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 53/188 (28%), Positives = 86/188 (45%)
Query: 68 LNKHVNTKVPLDLLYINNSAIRNINENTF---NGIFIKNLQLSHCRI-NSITPNAFRHLD 123
L K + L+ LY +++ + NI T+ N + L LSH ++ +++ +F L
Sbjct: 545 LEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIY--LDLSHNQLGDTLNGESFTGLL 602
Query: 124 AIRNINENTFNGI---------FIKNLQLSHCRINSITP---NAFRHLEFTLKHLNLQEN 171
++ + NGI + LQ H N+IT +AF L L LNL N
Sbjct: 603 VVQRLKLQN-NGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLP-VLFELNLYGN 660
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGL 231
++ + L L ++LS N I + +D F L +L L LS N+LT N G+
Sbjct: 661 QVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGV 720
Query: 232 ELNNNLTL 239
L++ L+L
Sbjct: 721 -LDDLLSL 727
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 158 (60.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 65/236 (27%), Positives = 114/236 (48%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNK 70
+ +++L ++ G + CP S C CS A E S+ C+ L TL +
Sbjct: 28 ILILMLGTVLSGSATGCP----------SRCECS---AQERSVVCH---RRKLI--TLPE 69
Query: 71 HVNTKVPLD--LLYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRN 127
+ P+D LL ++ + ++ IN F N +++LQL+ I+ I P AF +L +R
Sbjct: 70 GI----PIDTRLLDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRT 125
Query: 128 I---NEN-------TFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQV 176
+ N N F G+ + L +S +I + F+ L + LK L + +NDL +
Sbjct: 126 LGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQEL-YNLKELEVGDNDLVFI 184
Query: 177 PVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGL 231
L +L + + + + +P ++FS L+NL+TLKL N+ + ++ SFR L
Sbjct: 185 SHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRRL 240
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 41/117 (35%), Positives = 65/117 (55%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
++ IN F N +++LQL+ I+ I P AF +L L+ L L+ N+L+ + +
Sbjct: 85 LKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNL-LGLRTLGLRNNNLKLIQLGVFTG 143
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTL 239
L NLT +D+S+NKI + D F L NL L++ DN+L + +F GL LT+
Sbjct: 144 LSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTM 200
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/178 (24%), Positives = 82/178 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIR---------- 126
L+ L + + ++ F+ + + L+L H +N I +FR L ++
Sbjct: 195 LEQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRRLYRLKILEIANWPLL 254
Query: 127 -NINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++ + +G+ I L +++C + ++ A +HL + L+ NL N +E V + +L
Sbjct: 255 ESLTAKSLHGLNITTLSITNCNLTAVPYVAIQHLVY-LRFFNLSFNPIEVVEGNKMHNLL 313
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
L L ++ I SF LN L L +S N+L TL +++F + L L+ N
Sbjct: 314 RLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFHSVGNLETLALHDN 371
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 159 (61.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 69/253 (27%), Positives = 113/253 (44%)
Query: 6 SPFHLVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFK 65
SP L L L AL A P + + + C C + LS C++L
Sbjct: 3 SPAGLGALWLCAALCASPPAGAP-QPRAAPACPAPCRCQEDGIM-LSADCSELG----LS 56
Query: 66 ATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDA 124
A LDL +NN + + F+ + F++ L+LS ++ I +AF L +
Sbjct: 57 AVPRDLDPLTAYLDLS-MNN--LTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYS 113
Query: 125 IR--NINENTFNGI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
++ + N G+ +++L+L I+ + +F L +L+HL L +N L
Sbjct: 114 LKILMLQNNQLGGVPADALWELPSLQSLRLDANLISLVPERSFEGLS-SLRHLWLDDNAL 172
Query: 174 EQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLE 232
++PV L +L L + L+ N+I IPD +F L +LV L L +N + L +SF GL
Sbjct: 173 TEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLH 232
Query: 233 LNNNLTLYKNSFR 245
L L N +
Sbjct: 233 NLETLDLNYNELQ 245
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 38/106 (35%), Positives = 57/106 (53%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ L+LSH +I + P+ R + L+ + LQ N + + +T L +L +DLS N I
Sbjct: 352 LRVLELSHNQIEEL-PSLHRCQK--LEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNAI 408
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGL---ELNNNLTL 239
I ++F TL +LV L L+DN L TL GL +L NL L
Sbjct: 409 RSIHPEAFVTLRSLVKLDLTDNQLSTLPLAGLGGLMHLKLRGNLAL 454
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 41/180 (22%), Positives = 87/180 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L+ L ++ + + +I + F+G++ +K L L + ++ + +A L +++++
Sbjct: 90 LEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLIS 149
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
E +F G+ +++L L + I A +L L+ + L N + +P ++L
Sbjct: 150 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP-ALQAMTLALNRISHIPDYAFQNLT 208
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+L ++ L N+I + SF L+NL TL L+ N L + + R L L + N+ +
Sbjct: 209 SLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIK 268
>UNIPROTKB|E7EW58 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
InterPro:IPR003591 SMART:SM00369 GO:GO:0001934 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 HGNC:HGNC:17200
EMBL:AC004142 IPI:IPI00924926 ProteinModelPortal:E7EW58 SMR:E7EW58
Ensembl:ENST00000421101 ArrayExpress:E7EW58 Bgee:E7EW58
Uniprot:E7EW58
Length = 273
Score = 150 (57.9 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 68/248 (27%), Positives = 116/248 (46%)
Query: 9 HLVTLILLTALIQG--GSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKA 66
H++ + +T L+Q CP E T Y A+ ++ CNDL F A
Sbjct: 9 HVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEAS--TVDCNDL-GLLTFPA 65
Query: 67 TLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIR 126
L NT++ L L NN I I +T + + L LS ++S+T + + +
Sbjct: 66 RLP--ANTQILL--LQTNN--IAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLL 119
Query: 127 NI--NENTFNGI------FIKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQ 175
++ EN + + NLQ ++H +++I+P AF L L+ L+L N L+
Sbjct: 120 SVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLR-LHLNSNRLQM 178
Query: 176 VPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELN 234
+ + L NL ++ + +N I +I D +F L NL +L ++ NLT + N+ GLE
Sbjct: 179 INSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENL 238
Query: 235 NNLTLYKN 242
+++ Y N
Sbjct: 239 ESISFYDN 246
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
++ + G+ +++L+L I S+ ++F L L+HL L +N L +VPV L +
Sbjct: 93 LKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGL-VQLRHLWLDDNSLTEVPVHPLSN 151
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL-YK 241
L L + L+ NKI IPD +F+ L++LV L L +N + +L ++ F GL+ L L Y
Sbjct: 152 LPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYN 211
Query: 242 N 242
N
Sbjct: 212 N 212
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/86 (41%), Positives = 47/86 (54%)
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
F + LQL+ ++ I P A L+ LK L LQ N L+ VP E +R L L + L N
Sbjct: 58 FTQALQLAGNDLSFIHPKALSGLK-ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 116
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT 222
I +P+DSF L L L L DN+LT
Sbjct: 117 ITSVPEDSFEGLVQLRHLWLDDNSLT 142
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 129 (50.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LY 224
L L N+ QVP+E L + K+LTLIDLS N+I + + SFS ++ L+TL LS N L +
Sbjct: 742 LYLDGNEFTQVPLE-LSNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIP 800
Query: 225 KNSFRGLELNNNLTLYKN 242
+F GL+ L+L+ N
Sbjct: 801 AKAFDGLKSLRLLSLHGN 818
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ + LS+ +I + ++F+ L +L L L N + ++P L +L L+ L+ NKI
Sbjct: 317 LRRIDLSNNQITELASDSFQGLR-SLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKI 375
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
+ DSF L NL L L DN L T+ K +F L L L +N F
Sbjct: 376 NCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPF 423
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 63/221 (28%), Positives = 98/221 (44%)
Query: 14 ILLTALIQGGSAQ-CPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHV 72
++L AL+ G AQ CP S C CS TA + Q L + P + ++V
Sbjct: 7 VVLCALLCGAGAQSCP----------SQCSCS-GTAVDCHGQ--SLRSVP---RNIPRNV 50
Query: 73 NTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--N 129
LDL N + + I + F G+ ++ LQL +I+SI AF+ L + + N
Sbjct: 51 ER---LDL---NANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLN 104
Query: 130 ENTFNGI----FIKN-----LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
N + F+ L LS +I I AFR +K+L L N + +
Sbjct: 105 RNNLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRG-STEIKNLQLDYNQISCIEDGA 163
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
R L +L ++ L+ N I ++ SF+ + L T +L NNL
Sbjct: 164 FRALGDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNL 204
Score = 79 (32.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLS 107
EL + N+ T + +AT + K+P L + ++N+ I +I E TF G + L L+
Sbjct: 520 ELRLNNNEFT---VLEAT---GIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILT 573
Query: 108 HCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSITPNAF 156
R+ + + + L +R +N +F G+ ++ L L I S++P AF
Sbjct: 574 SNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAF 633
Query: 157 RHLEFTLKHLNLQEN 171
L +L LNL N
Sbjct: 634 DTLH-SLSTLNLLAN 647
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/220 (25%), Positives = 107/220 (48%)
Query: 39 STCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYIN--NSAIRNINENTF 96
+ C+C+ + S+ C+ +A L + + ++ P + IN ++I+ ++E F
Sbjct: 27 ANCVCTQERS--CSVLCD--------RAGLGQ-IPSEFPCEASSINLDKNSIKFLSERAF 75
Query: 97 NGI-FIKNLQLSHCRINSITPNAFR-----------HLDAIRNINENTFNGIF-IKNLQL 143
+ +K+L L+H I+ ITP AF+ H + IR ++ TF + + L L
Sbjct: 76 GTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDL 135
Query: 144 SHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDD 203
+ C + +I F L +L+ L +N+ ++P +R ++NLT + L +N+I + +
Sbjct: 136 ADCNLFNIPDRIFIELP-SLQELFCFQNNFRRIP-GAIRGMENLTHVYLERNRIEAVAYN 193
Query: 204 SFSTLNNLVTLKLSDNNLTL-YKNSFRGLELNNNLTLYKN 242
S L L L L DN + + ++ +F+G L L N
Sbjct: 194 SLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDN 233
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 87 AIRNINENTFNGIFIKNLQLSHCRINSI---TPNAFRHL--DAIRNINENTFNGIF-IKN 140
AIR + EN + ++++ ++ NS+ T + +L + I ++E F G ++
Sbjct: 170 AIRGM-ENLTH-VYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEY 227
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
L L+ I+ + N+F L LK LNL N L V R L L ++ L +N+I I
Sbjct: 228 LYLNDNLISELPENSFDGLR-CLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYI 286
Query: 201 PDDSFSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNLTLYKN 242
+ +F L +LV+L L+ NNLT S F+ + L L++N
Sbjct: 287 EEGAFENLTSLVSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRN 329
>FB|FBgn0005775 [details] [associations]
symbol:Con "Connectin" species:7227 "Drosophila melanogaster"
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA;TAS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=NAS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007413 "axonal
fasciculation" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
GO:GO:0009986 EMBL:AE014296 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0031594 GO:GO:0007413 GO:GO:0007156 GO:GO:0044295 EMBL:M96647
EMBL:X68701 EMBL:AY119518 PIR:A43318 PIR:A49121
RefSeq:NP_001246635.1 RefSeq:NP_523930.3 UniGene:Dm.2557
ProteinModelPortal:Q01819 SMR:Q01819 STRING:Q01819 PaxDb:Q01819
GeneID:38590 KEGG:dme:Dmel_CG7503 UCSC:CG7503-RA CTD:38590
FlyBase:FBgn0005775 InParanoid:Q01819 OrthoDB:EOG49KD5V
GenomeRNAi:38590 NextBio:809410 Bgee:Q01819 GermOnline:CG7503
GO:GO:0016200 Uniprot:Q01819
Length = 682
Score = 146 (56.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 51/166 (30%), Positives = 83/166 (50%)
Query: 78 LDLLYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDA-----IRNINEN 131
L+ + +NN+ I ++++ F N I ++ L L H +I + AFR+L + N N +
Sbjct: 200 LERIILNNNHIMALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNIS 259
Query: 132 TFN-GIF-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
T + G+F + L L+H +IN +T FR L L L L N+L + L
Sbjct: 260 TLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLG-NLNVLKLTRNNLNFIGDTVFAELW 318
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSF-RG 230
+L+ ++L N+I +I + + LN L TL L +N L N RG
Sbjct: 319 SLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRG 364
Score = 132 (51.5 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 53/190 (27%), Positives = 99/190 (52%)
Query: 48 ANELSIQCNDLTNYPLFKATLNKHVNTKVPL-DLLYINNSAIRNINENTFNGIF-IKNLQ 105
AN + ++ +L + +F+ ++++ +PL + L++NN+ I ++E F + + L
Sbjct: 219 ANHIRLRELNLEHNQIFE--MDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLN 276
Query: 106 LSHCRINSITPNAFR---HLDAIR----NIN---ENTFNGIF-IKNLQLSHCRINSITPN 154
L+H +IN +T FR +L+ ++ N+N + F ++ + L+L RI I+
Sbjct: 277 LAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISER 336
Query: 155 AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL-NNLVT 213
A L TLK LNL+ N L+++ LR L I++ NK+ + +F + +NLV
Sbjct: 337 ALDGLN-TLKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVN 395
Query: 214 ----LKLSDN 219
L +SDN
Sbjct: 396 STSELLVSDN 405
Score = 111 (44.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 45/179 (25%), Positives = 81/179 (45%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L + I S + + F + F++ + L++ I ++ +AF + +R +N N I
Sbjct: 176 LSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFANHIRLRELNLE-HNQI 234
Query: 137 F------IKNLQL------SHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
F +NL L ++ I+++ F + L LNL N + + E R L
Sbjct: 235 FEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMA-RLTFLNLAHNQINVLTSEIFRGL 293
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
NL ++ L++N + I D F+ L +L L+L DN + + + + GL L L N
Sbjct: 294 GNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNN 352
Score = 50 (22.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 230 GLELNNNLTLYKNSFRG 246
GL+L++NL+L+K F G
Sbjct: 564 GLDLDDNLSLHKQGFYG 580
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 218 DNNLTLYKNSFRG 230
D+NL+L+K F G
Sbjct: 568 DDNLSLHKQGFYG 580
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 118 (46.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L L++LTLIDLS N I + + +FS +++L TL LS N L
Sbjct: 757 LYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIP 815
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 816 VHAFNGLRSLRVLTLHGN 833
Score = 96 (38.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ LS+ I+ +T F ++ L L L N L +PV L++L ++ L N I +
Sbjct: 780 IDLSNNSISMLTNYTFSNMSH-LSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 201 PDDSFSTLNNLVTLKLSDNNL 221
P+ SF+ L +L L L N L
Sbjct: 839 PEGSFNDLTSLSHLALGTNPL 859
Score = 90 (36.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I+ + E F+G ++ L L+ ++ ++ FR L ++
Sbjct: 555 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRS 614
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
++ +TF G+ ++ L L RI +ITP AF L +L +NL N
Sbjct: 615 NLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTL-VSLSTINLLSN 663
Score = 74 (31.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I ++ +TF G+ ++ L L RI +ITP AF L ++ IN N FN
Sbjct: 607 LKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFN 666
Score = 56 (24.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIFIKNL-QLSHCRINSITPNAFRHLDAIRNIN--ENT 132
V L LL +N + I + NTF + NL L ++ +I+ F L +I+ ++ +N
Sbjct: 379 VSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNP 438
Query: 133 F 133
F
Sbjct: 439 F 439
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 118 (46.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L L++LTLIDLS N I + + +FS +++L TL LS N L
Sbjct: 757 LYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIP 815
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 816 VHAFNGLRSLRVLTLHGN 833
Score = 96 (38.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ LS+ I+ +T F ++ L L L N L +PV L++L ++ L N I +
Sbjct: 780 IDLSNNSISMLTNYTFSNMSH-LSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 201 PDDSFSTLNNLVTLKLSDNNL 221
P+ SF+ L +L L L N L
Sbjct: 839 PEGSFNDLTSLSHLALGTNPL 859
Score = 90 (36.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I+ + E F+G ++ L L+ ++ ++ FR L ++
Sbjct: 555 KLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRS 614
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
++ +TF G+ ++ L L RI +ITP AF L +L +NL N
Sbjct: 615 NLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTL-VSLSTINLLSN 663
Score = 74 (31.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I ++ +TF G+ ++ L L RI +ITP AF L ++ IN N FN
Sbjct: 607 LKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFN 666
Score = 56 (24.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIFIKNL-QLSHCRINSITPNAFRHLDAIRNIN--ENT 132
V L LL +N + I + NTF + NL L ++ +I+ F L +I+ ++ +N
Sbjct: 379 VSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNP 438
Query: 133 F 133
F
Sbjct: 439 F 439
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 66/258 (25%), Positives = 117/258 (45%)
Query: 7 PFHLVTLILLTALIQGGSAQCPWEDES-ESELQSTCICSYNTANELSIQCNDLTNYPLFK 65
P L+ L+ L L +A CP + + E S +C ++ IQ N T Y
Sbjct: 22 PVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKY--IN 79
Query: 66 ATLNKHVNT---KVP----LDLLYINNSAIRNINENTFN-GIFIKNLQLSHCRINSITPN 117
T+N+ + T +P L++L ++ + I + F ++ L LS ++S+ +
Sbjct: 80 LTVNR-IRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKH 138
Query: 118 AFRHL----------DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHL 166
AF+ L + I ++ + + + L L++ I S+ N F+ + TL+ L
Sbjct: 139 AFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMN-TLEVL 197
Query: 167 NLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYK 225
+ N L VP L HL L +D+S N + + +DSF L L+ L + N ++ L
Sbjct: 198 VFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDL 257
Query: 226 NSFRGLELNNNLTLYKNS 243
++F GL +L L N+
Sbjct: 258 SAFEGLISLKHLDLSDNN 275
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/181 (28%), Positives = 91/181 (50%)
Query: 76 VPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFN 134
V LDL NN+ + ++ +N F G+ ++ L + R+ + + HL A++++ + + N
Sbjct: 171 VELDLT--NNNIV-SLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSL-DMSLN 226
Query: 135 GI-FIKNLQ---LSHCRINSITPNAFRHLEFT-------LKHLNLQENDLEQVPVETLRH 183
+ F++N L S+ N L+ + LKHL+L +N+L VP + L
Sbjct: 227 LVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSK 286
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNL-TLYKN 242
L NLT ++L N+ ++P +F L +L L LS + L + R N +L TL+ N
Sbjct: 287 LSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDF-LQRIDSRAFVDNTHLQTLHLN 345
Query: 243 S 243
+
Sbjct: 346 N 346
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 52/177 (29%), Positives = 88/177 (49%)
Query: 83 INNSAIRNINENTFNGIF--IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKN 140
+++ + + + ++ +GI I+ Q I S+T N ++ + N F+G+FI+
Sbjct: 34 VHSGIVLDCSNSSASGILQIIRTNQAQVGLIQSLTMNQAELVE----LPPNFFSGLFIRR 89
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
L LS +I I AF + L+ + L N +E+VP L L NL +DLS N I +I
Sbjct: 90 LDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEI 149
Query: 201 PDDS-FSTLNNLVTLKLSDNNL-TLY-------KNSFRGLEL-NNNLTLYKNS-FRG 246
+ F LN L + L N + +++ KNS + + L +NN+T +S RG
Sbjct: 150 QEQEIFPNLNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRG 206
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 57/236 (24%), Positives = 105/236 (44%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN 69
L+ L+L + L+ + CP + C CS + + + C++ + + +
Sbjct: 4 LLCLLLFSTLLINSTNACP------GVITQACFCS-EVHSGIVLDCSNSSASGILQIIRT 56
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN 129
+ + L +N + + + N F+G+FI+ L LS +I I AF ++ +
Sbjct: 57 NQAQVGL-IQSLTMNQAELVELPPNFFSGLFIRRLDLSQNKIKKIDDAAFAGINPV---- 111
Query: 130 ENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV-ETLRHLKNLT 188
++ + L+H I + A L L+ L+L N + ++ E +L L
Sbjct: 112 --------LEEVVLNHNLIEKVPAAALAGLPNLLR-LDLSNNSIVEIQEQEIFPNLNKLY 162
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLV-TLKLSDNNLTLYKNS-FRGLELNNNLTLYKN 242
I+L NKI I +F + N + T+ L NN+T +S RGL+ +L L+KN
Sbjct: 163 DINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKN 218
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 53/161 (32%), Positives = 85/161 (52%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI---NE-NT 132
L++L + N+ I I N+ +G+ ++ L L+H +I++I+ NAF + + + NE T
Sbjct: 282 LEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTNSSIVVLVLSSNELKT 341
Query: 133 FN-GIF--IKNLQLSHCR---INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
GI + NLQ R I +I NAF +L L+L +N L ++ T N
Sbjct: 342 LTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAA-SLVMLDLAKNQLTEIAPTTFLAQLN 400
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLV-TLKLSDNNLTLYKN 226
L L+DLS+NK+ K P +S N+ V T+ L +N L +N
Sbjct: 401 LLLVDLSENKLPKTP---YSAFNSRVGTVLLKENPLVCTEN 438
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 44/168 (26%), Positives = 86/168 (51%)
Query: 78 LDLLY-IN--NSAIRNINENTFNGI--FIKNLQLSHCRINSITPNAFR----------HL 122
L+ LY IN ++ I +I+ +TF + I+ + L H + ++ +A R H
Sbjct: 158 LNKLYDINLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHK 217
Query: 123 DAIRNINENTFNGIFIKNL-QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+ I ++ F + + NL L+ +I+ + AF ++ +L++L L N + ++
Sbjct: 218 NRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVP-SLRYLYLSGNKITKLTAYQF 276
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSF 228
+ + L ++DL+ N+IG IP +S S L L L L+ N ++ + N+F
Sbjct: 277 QTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAF 324
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 47/188 (25%), Positives = 86/188 (45%)
Query: 57 DLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSIT 115
+L + +F + N K + + + ++ + + + G+ +++L L RI +
Sbjct: 165 NLGSNKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLD 224
Query: 116 PNAFRHL----------DAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLK 164
F +L + I +N F + ++ L LS +I +T F+ E L+
Sbjct: 225 ALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFE-QLE 283
Query: 165 HLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TL 223
L+L N++ +P +L LK L + L+ NKI I ++F T +++V L LS N L TL
Sbjct: 284 MLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAF-TNSSIVVLVLSSNELKTL 342
Query: 224 YKNSFRGL 231
GL
Sbjct: 343 TAGIISGL 350
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 55/173 (31%), Positives = 89/173 (51%)
Query: 73 NTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF---RHLDAI--- 125
N L L +N + IN T++ + + +L LSH + S AF +HL+ +
Sbjct: 393 NALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLS 452
Query: 126 RN----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
RN +N F+G+F +K L L+ C I +I +F L+ L+L +N++ + T
Sbjct: 453 RNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFP-NLEVLDLGDNNIRTLNHGT 511
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNSFRGLE 232
R LK L + LS N + + +SFS L NL +L L N+L+ + ++ F GLE
Sbjct: 512 FRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLE 564
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/108 (34%), Positives = 64/108 (59%)
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
+ +L L+H I + P +F +L L L L+ N + ++ R L+NLTL++L +NK
Sbjct: 104 YTTHLNLTHNEIQVLPPWSFTNLS-ALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENK 162
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
I + ++SF L++L TL LS N +T ++K++F L L+L +N+
Sbjct: 163 IQSV-NNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNN 209
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 52/170 (30%), Positives = 87/170 (51%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF------RHLDAIRNINE 130
L LL + + I+++N N+F G+ +K L LSH +I I +AF ++L RN N
Sbjct: 153 LTLLNLVENKIQSVN-NSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRN-NI 210
Query: 131 NTFNGIFIKNLQLSHC--RINSITPNAFRHLEFT------LKHLNLQENDLEQVPVETLR 182
+ F+GI ++ +Q C R++ +T N+ +L+ + L HL+ + N L ++ L
Sbjct: 211 SDFSGI-LEAVQHLPCLERLD-LTNNSIMYLDHSPRSLVSLTHLSFEGNKLRELNFSALS 268
Query: 183 HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
L NLT + S+N I + TL L +L LS + L S + L+
Sbjct: 269 -LPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSAKHLQ 317
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 31/96 (32%), Positives = 46/96 (47%)
Query: 147 RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFS 206
+I ++T A + HLNL N+++ +P + +L L + L N I KI + +F
Sbjct: 90 KITNLT-EAISDIPRYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFR 148
Query: 207 TLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242
L NL L L +N + NSF GL L L N
Sbjct: 149 GLENLTLLNLVENKIQSVNNSFEGLSSLKTLLLSHN 184
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 153 (58.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/167 (26%), Positives = 90/167 (53%)
Query: 57 DLTNYPLFKATLNKHV-NTKVPLDL--LYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
+LT++ L+ L++ + T P+ L L++ ++ + ++ EN F+ + I+ L +S RI
Sbjct: 266 NLTHFSLYDNRLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQ 325
Query: 113 SITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEND 172
I+P AF L I +K + L R+ +I P FR L L +++++ N
Sbjct: 326 YISPGAFNGL-------------IELKEVSLHTNRLTNIEPGIFRGLP-NLANISIENNQ 371
Query: 173 LEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
++Q+P++ L + L+L+++ N + +P D +TL+ + + L +N
Sbjct: 372 IKQIPIQLLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHEN 418
Score = 150 (57.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 51/177 (28%), Positives = 89/177 (50%)
Query: 70 KHVNTKVP--LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN 127
K + +P ++ L I+N++I+++ + F F + L L + ++IT
Sbjct: 40 KEIPLPMPPTINALVISNTSIQSLKPSDFQ-TFAETLTLFVAKNSNIT-----------E 87
Query: 128 INENTFNGIFIKN-LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ +TF+ F N L S + S+ N F++L L L L N LE +P L L N
Sbjct: 88 VEPHTFDQAFNLNVLGFSGTMLTSLPDNLFQNLT-ALTTLTLSGNKLEVLPSSLLTPLVN 146
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+ +DLSKN + + +D+F L+ L L L N++ L+ ++F+GL +L L +N
Sbjct: 147 VNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQN 203
Score = 149 (57.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 101 IKNLQLSHCRINSITPNAFRHLD----------AIRNINENTFNGI-FIKNLQLSHCRIN 149
+ L LS ++S++ +AFR LD +I+ ++ +TF G+ +++L L +
Sbjct: 147 VNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELT 206
Query: 150 SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLN 209
I F L L+ L+LQ+N +EQ+P ++ L + LS N++ +P F L
Sbjct: 207 DIPAGLFDDL-VNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLP 265
Query: 210 NLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
NL L DN L+ L +F + L L LY N
Sbjct: 266 NLTHFSLYDNRLSRLMPETFGPMALQE-LWLYDN 298
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 105 QLSHCRINSITPNAFRHL----DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 159
+LS + P A + L + + ++ EN F+ + I+ L +S RI I+P AF L
Sbjct: 276 RLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGL 335
Query: 160 EFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
LK ++L N L + R L NL I + N+I +IP ++ L L++ +N
Sbjct: 336 -IELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNN 394
Query: 220 NL-TLYKNSFRGLELNNNLTLYKNSFR 245
+L L K+ L + N+ L++N +R
Sbjct: 395 SLQNLPKDFLNTLSIVENVILHENPWR 421
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 124 AIRNINENTFNGIFIKNLQL---SHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
+I+++ + F F + L L + I + P+ F F L L L +P
Sbjct: 59 SIQSLKPSDFQ-TFAETLTLFVAKNSNITEVEPHTFDQA-FNLNVLGFSGTMLTSLPDNL 116
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
++L LT + LS NK+ +P + L N+ L LS N L+ L +++FRGL+ L L
Sbjct: 117 FQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLML 176
Query: 240 YKNSFR 245
+NS +
Sbjct: 177 QRNSIK 182
>UNIPROTKB|F1NL15 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
Pfam:PF01463 GeneTree:ENSGT00700000104083 EMBL:AADN02035923
IPI:IPI00818500 Ensembl:ENSGALT00000041140 ArrayExpress:F1NL15
Uniprot:F1NL15
Length = 1094
Score = 108 (43.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP + L ++LTLIDLS N I + + +FS + L TL LS N L
Sbjct: 327 LYLEGNHLTAVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIP 385
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 386 VHAFNGLRSLRVLTLHGN 403
Score = 97 (39.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I+ I E TF+G ++ L L+ ++ S+ FR L ++
Sbjct: 125 KLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRS 184
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
IN +TF G+ ++ L L I++ITP AF L +L +NL N
Sbjct: 185 NSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTL-VSLSTINLLAN 233
Score = 86 (35.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + +++I IN +TF G+ ++ L L I++ITP AF L ++ IN N+FN
Sbjct: 177 LKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFN 236
Query: 135 -GIFIKNLQ--LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
+ L L RI S P + F LK + +Q+ D + E
Sbjct: 237 CNCHLAWLGKWLRKKRIVSGNPRCLK--PFFLKDIPIQDVDAQDFTCE 282
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 58/225 (25%), Positives = 104/225 (46%)
Query: 29 WEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN--KHVNTKV-----PLDLL 81
W + ES+ +YN E+ N L N +N + L+ L
Sbjct: 89 WNNTLESQTLQEVKMNYNELTEIPYFGEPTPNITLLSLVHNLIPEINAEAFELYSALESL 148
Query: 82 YINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL 141
++++ I I ++F + +K L LS+ RI+++ F +N + + + +
Sbjct: 149 DLSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCF----------DNLSDSLLV--V 196
Query: 142 QLSHCRINSITPNAFR--HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK 199
+L+ RI+ I P F+ HL+F L L+ N ++ V T + L +L + + +N I K
Sbjct: 197 KLNRNRISMIPPKVFKLPHLQF----LELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISK 252
Query: 200 IPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+ D +F LNN+ L+L NNLT + K GL + L + +N+
Sbjct: 253 LKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNA 297
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 50/221 (22%), Positives = 98/221 (44%)
Query: 36 ELQSTCICSYNTAN--ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINE 93
+L S I T++ +S++ +L+N + N L ++ +N + I I
Sbjct: 149 DLSSNIISEIKTSSFPRMSLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPP 208
Query: 94 NTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN----------ENTFNGIF-IKNLQ 142
F ++ L+L RI + F+ LD++R++ + F G+ ++ L+
Sbjct: 209 KVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELE 268
Query: 143 LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD 202
L H + + L L+ L + +N +E++ + + L+ +DLS N++ ++ +
Sbjct: 269 LEHNNLTGVNKGWLYGLRM-LQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDE 327
Query: 203 DSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+F L+ L L L DN +T + FR L L L N
Sbjct: 328 SAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 368
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNIN--E 130
K+P L L + + I+ + TF G+ +++L++ I+ + AF L+ + +
Sbjct: 212 KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEH 271
Query: 131 NTFNGI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
N G+ ++ L +S I I+P+A+ + L L+L N L ++
Sbjct: 272 NNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQ-RLSELDLSYNQLTRLDESAF 330
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY----KNSFRGLELNNNL 237
L L ++L N++ I D F L+NL TL L +N+++ +F GL+ L
Sbjct: 331 VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKL 390
Query: 238 TLYKNSFR 245
L N +
Sbjct: 391 ILQGNRIK 398
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/155 (29%), Positives = 81/155 (52%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR--NINENTFN 134
L++L + ++ + ++ +F G+ ++ L LSH +++ + F +L +R IN N
Sbjct: 922 LEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLR 981
Query: 135 GI---FIKNLQLSHCRI--N--SITP-NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ N +L I N S+ P AF + FTL+ + + N+LE + + +
Sbjct: 982 ALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQF 1041
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
L I L++N+I +PD++FS LNNL L LS N L
Sbjct: 1042 LYDISLARNRITILPDNTFSFLNNLTNLDLSQNPL 1076
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL-DAIR--NINENT 132
V L L + + + + E F I +L L+ I+ + P+AF L + + ++ N
Sbjct: 477 VHLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNR 536
Query: 133 FNGIFIKNLQLSHCRINSITPNAFRHLE----FT--LKHLNLQENDLEQVPVETLRHLKN 186
+ + L H + +T N L FT L+ L+L N+ +PV L++
Sbjct: 537 LTTVPVALSSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQ 596
Query: 187 LTLIDLSKNKIGKIPDDSF---STLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L+ +++ N I IP+ F S +NL T+ L +N +T L+ SF GLE ++L N
Sbjct: 597 LSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFN 656
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 44/137 (32%), Positives = 68/137 (49%)
Query: 89 RNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRI 148
+N EN + F +N H R ++ N F + + E F I +L L+ I
Sbjct: 459 QNCIENLESDYFQQNYSDVHLRALNLEQN-F-----VTQLPEAVFKATGIAHLVLAFNAI 512
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPV--ETLRHLKNLTLIDLSKNKIGKIPDDSFS 206
+ + P+AF L TL++L+L+ N L VPV +L HLK L L +++ +P SF+
Sbjct: 513 SRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLP--SFT 570
Query: 207 TLNNLVTLKLSDNNLTL 223
NL L LS NN ++
Sbjct: 571 --ENLRVLSLSGNNFSM 585
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 124 (48.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
I ++L I SI AF + LK +++ +N + + + + LK+LT + L NKI
Sbjct: 309 IVEIRLEQNSIKSIPAGAFTQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNSFR 245
+IP F L +L L L+ N + + N+F+ L+ N L+LY N +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ 416
Score = 116 (45.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L + LTLIDLS N I + + +FS +++L TL LS N L
Sbjct: 757 LYLEGNHLTAVPKE-LSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 816 VHAFNGLRSLRVLTLHGN 833
Score = 99 (39.9 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ LS+ I+ +T + F ++ L L L N L +PV L++L ++ L N I +
Sbjct: 780 IDLSNNSISMLTNHTFSNMSH-LSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Query: 201 PDDSFSTLNNLVTLKLSDNNL 221
P+ SF+ L +L L L N L
Sbjct: 839 PEGSFNDLTSLSHLALGTNPL 859
Score = 90 (36.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 37/140 (26%), Positives = 71/140 (50%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IK 102
Y T +L + ND++ + +AT + K+P L + ++N+ I+ + E F+G ++
Sbjct: 533 YTT--DLRLNDNDIS---VLEAT---GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQ 584
Query: 103 NLQLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSI 151
L L+ ++ ++ FR L +++ ++ +TF G+ ++ L L RI +I
Sbjct: 585 ELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTI 644
Query: 152 TPNAFRHLEFTLKHLNLQEN 171
TP AF L +L +NL N
Sbjct: 645 TPGAFTTL-VSLSTINLLSN 663
Score = 75 (31.5 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I ++ +TF G+ ++ L L RI +ITP AF L ++ IN N FN
Sbjct: 607 LKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFN 666
Score = 40 (19.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQL 106
L++L +NN+ I I +FN + I+ L+L
Sbjct: 183 LEILTLNNNNISRILVTSFNHMPKIRTLRL 212
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 46/173 (26%), Positives = 88/173 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFR------HLDAIRN--- 127
L L ++ + ++++ + F + +K L+ +C++ I P + LD RN
Sbjct: 180 LKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFK 239
Query: 128 -INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++++ F + + + L +++ + FR ++ +L HL+L N L +VP ++ L
Sbjct: 240 FLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFR-MQKSLNHLDLSYNRLAKVPNDSFLQLT 298
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLT 238
NLT +DLS NK+ ++ S +L+NL+TL +S N L + EL LT
Sbjct: 299 NLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLREMRETFELIPQLT 351
Score = 150 (57.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 65/247 (26%), Positives = 110/247 (44%)
Query: 10 LVTLILLTALIQGGSAQCPWEDE-SESEL---QSTC----ICSYNTANELSIQCNDLT-N 60
L +L ++ A+ +CP E + S +L Q+ C + S + NEL + +
Sbjct: 7 LFSLCIMPAMFSNTKRKCPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVIIIR 66
Query: 61 YPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF 119
P T+ + + L++L I +S + I +F G+ +++ L LS I +IT N F
Sbjct: 67 GPRNSITIGPALRQFMKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNF 126
Query: 120 RHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
R D N+ E L LS ++ + + FRHL L+ LNL +N + ++
Sbjct: 127 RGQD---NLLE----------LDLSKNKVLRMASSTFRHLT-DLRRLNLADNSIVELVQR 172
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLT 238
L L +DLS N + + D F + L LK + L + + L L + L
Sbjct: 173 NFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELD 232
Query: 239 LYKNSFR 245
L +N F+
Sbjct: 233 LGRNEFK 239
>UNIPROTKB|Q6UXK2 [details] [associations]
symbol:ISLR2 "Immunoglobulin superfamily containing
leucine-rich repeat protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0009986 "cell surface"
evidence=ISS] [GO:0045773 "positive regulation of axon extension"
evidence=ISS] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045773 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 EMBL:AB040898 EMBL:AY358316 EMBL:AK290467
IPI:IPI00479654 RefSeq:NP_001123608.1 RefSeq:NP_001123609.1
RefSeq:NP_001123610.1 RefSeq:NP_065902.1 UniGene:Hs.254775
ProteinModelPortal:Q6UXK2 SMR:Q6UXK2 IntAct:Q6UXK2 STRING:Q6UXK2
PhosphoSite:Q6UXK2 DMDM:74758577 PaxDb:Q6UXK2 PRIDE:Q6UXK2
Ensembl:ENST00000361742 Ensembl:ENST00000419208
Ensembl:ENST00000435464 Ensembl:ENST00000445793
Ensembl:ENST00000453268 Ensembl:ENST00000565159
Ensembl:ENST00000565540 GeneID:57611 KEGG:hsa:57611 UCSC:uc002axd.3
CTD:57611 GeneCards:GC15P074421 HGNC:HGNC:29286 MIM:614179
neXtProt:NX_Q6UXK2 PharmGKB:PA143485505 eggNOG:NOG240332
HOGENOM:HOG000113108 HOVERGEN:HBG100863 InParanoid:Q6UXK2
OMA:PRASYLE OrthoDB:EOG4QC14W GenomeRNAi:57611 NextBio:64263
ArrayExpress:Q6UXK2 Bgee:Q6UXK2 CleanEx:HS_ISLR2
Genevestigator:Q6UXK2 Uniprot:Q6UXK2
Length = 745
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/108 (32%), Positives = 61/108 (56%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ +L L+H + ++ P A L LK+L+L N + P LR+L L L+ ++ N++
Sbjct: 77 VTSLWLAHNEVRTVEPGALAVLS-QLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRL 135
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
G +P D+ L +L +L++++N L TL +F L ++L LY N F
Sbjct: 136 GSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHNPF 183
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 126 (49.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 37/108 (34%), Positives = 58/108 (53%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+K + +S +I+ I P+AF+ L+ +L L L N + ++P L +L L+ L+ NKI
Sbjct: 147 LKRIDISKNQISEIAPDAFKGLK-SLISLVLYGNKITEIPQGLFDDLVSLQLLLLNANKI 205
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
+ ++F L+NL L L DN L T+ K F L L L +N F
Sbjct: 206 NCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNPF 253
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
I ++L I I P AF + LK +++ +N + ++ + + LK+L + L NKI
Sbjct: 123 IWEIRLEQNLIKVIPPGAFTQYK-KLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKI 181
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNSFR 245
+IP F L +L L L+ N + + N+F+GL L+LY N +
Sbjct: 182 TEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQ 230
Score = 108 (43.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP + L ++LTLIDLS N I + + +FS + L TL LS N L
Sbjct: 571 LYLEGNHLTAVP-KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLRCIP 629
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 630 VHAFNGLRSLRVLTLHGN 647
Score = 107 (42.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ + LS+ +I I F ++ L L EN LE V R L L + L N I
Sbjct: 373 LRKINLSNNKIKEIREGTFDGAS-GVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSI 431
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
I +D+F+ L+++ L L DN++ T+ +F L + + L NSF
Sbjct: 432 SCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSF 479
Score = 100 (40.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 158 HL-EFTLKHLNLQENDLEQVP-VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
HL E+T L L +ND+ + + + L NL I+LS NKI +I + +F + + L
Sbjct: 343 HLPEYTTD-LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELI 401
Query: 216 LSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
L++N L +++ FRGL L L NS
Sbjct: 402 LTENQLESVHGRMFRGLTGLKTLMLRSNS 430
Score = 97 (39.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I+ I E TF+G ++ L L+ ++ S+ FR L ++
Sbjct: 369 KLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRS 428
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
IN +TF G+ ++ L L I++ITP AF L +L +NL N
Sbjct: 429 NSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTL-VSLSTINLLAN 477
Score = 86 (35.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 34/108 (31%), Positives = 53/108 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + +++I IN +TF G+ ++ L L I++ITP AF L ++ IN N+FN
Sbjct: 421 LKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANSFN 480
Query: 135 -GIFIKNLQ--LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
+ L L RI S P + F LK + +Q+ D + E
Sbjct: 481 CNCHLAWLGKWLRKKRIVSGNPRCLK--PFFLKDIPIQDVDAQDFTCE 526
Score = 66 (28.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENT 132
V L LL +N + I + NTF G+ +K L L ++ +I+ F L +I+ ++ +N
Sbjct: 193 VSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNP 252
Query: 133 F 133
F
Sbjct: 253 F 253
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 54/181 (29%), Positives = 90/181 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR--NINENTFN 134
LDL +NN + + F+ + F++ L+LS ++ I AF L +++ + N
Sbjct: 71 LDLS-MNN--LTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLG 127
Query: 135 GI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
GI +++L+L I+ + +F L +L+HL L +N L ++PV L +L
Sbjct: 128 GIPAEALWELPSLQSLRLDANLISLVPERSFEGLS-SLRHLWLDDNALTEIPVRALNNLP 186
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSF 244
L + L+ N+I IPD +F L +LV L L +N + L +SF GL L L N
Sbjct: 187 ALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKL 246
Query: 245 R 245
+
Sbjct: 247 Q 247
Score = 134 (52.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ L+LSH +I + P+ R + L+ + LQ N + ++ +T L +L +DLS N I
Sbjct: 354 LRVLELSHNQIEEL-PSLHRCQK--LEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAI 410
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRG----LELNNNLTL 239
I ++FSTL++LV L L+DN LT + G L+L NL L
Sbjct: 411 RSIHPEAFSTLHSLVKLDLTDNQLTTLPLAGLGGLMHLKLKGNLAL 456
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 42/180 (23%), Positives = 85/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L+ L ++ + + +I F+G++ +K L L + ++ I A L +++++
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS 151
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
E +F G+ +++L L + I A +L L+ + L N + +P ++L
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP-ALQAMTLALNRISHIPDYAFQNLT 210
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+L ++ L N+I + SF L+NL TL L+ N L + + R L L + N+ +
Sbjct: 211 SLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVAIRTLGRLQELGFHNNNIK 270
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 122 (48.0 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
I ++L I SI AF + LK +++ +N + + + + LK+LT + L NKI
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNSFR 245
+IP F L +L L L+ N + + N+F+ L+ N L+LY N +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ 416
Score = 116 (45.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L + LTLIDLS N I + + +FS +++L TL LS N L
Sbjct: 757 LYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 816 VHAFNGLRSLRVLTLHGN 833
Score = 102 (41.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 121 HLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
HL A+ +TF + + + LS+ I+ +T + F ++ L L L N L +PV
Sbjct: 763 HLTAVPK-ELSTFRQLTL--IDLSNNSISMLTNHTFSNMSH-LSTLILSYNRLRCIPVHA 818
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
L++L ++ L N I +P+ SF+ L +L L L N L
Sbjct: 819 FNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 89 (36.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IK 102
Y T +L + ND+ + +AT + K+P L + ++N+ I+ + E F+G ++
Sbjct: 533 YTT--DLRLNDNDIA---VLEAT---GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQ 584
Query: 103 NLQLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSI 151
L L+ ++ ++ FR L ++ +N +TF G+ ++ L L RI +I
Sbjct: 585 ELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTI 644
Query: 152 TPNAFRHLEFTLKHLNLQEN 171
+P AF L +L +NL N
Sbjct: 645 SPGAFTTL-VSLSTINLLSN 663
Score = 76 (31.8 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I +N +TF G+ ++ L L RI +I+P AF L ++ IN N FN
Sbjct: 607 LKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFN 666
Score = 40 (19.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQL 106
L++L +NN+ I I +FN + I+ L+L
Sbjct: 183 LEILTLNNNNISRILVTSFNHMPKIRTLRL 212
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 122 (48.0 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
I ++L I SI AF + LK +++ +N + + + + LK+LT + L NKI
Sbjct: 309 IVEIRLEQNSIKSIPAGAFIQYK-KLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKI 367
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNSFR 245
+IP F L +L L L+ N + + N+F+ L+ N L+LY N +
Sbjct: 368 TEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQ 416
Score = 116 (45.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L + LTLIDLS N I + + +FS +++L TL LS N L
Sbjct: 757 LYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIP 815
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 816 VHAFNGLRSLRVLTLHGN 833
Score = 102 (41.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 121 HLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
HL A+ +TF + + + LS+ I+ +T + F ++ L L L N L +PV
Sbjct: 763 HLTAVPK-ELSTFRQLTL--IDLSNNSISMLTNHTFSNMSH-LSTLILSYNRLRCIPVHA 818
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
L++L ++ L N I +P+ SF+ L +L L L N L
Sbjct: 819 FNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGINPL 859
Score = 89 (36.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIF-IK 102
Y T +L + ND+ + +AT + K+P L + ++N+ I+ + E F+G ++
Sbjct: 533 YTT--DLRLNDNDIA---VLEAT---GIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQ 584
Query: 103 NLQLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSI 151
L L+ ++ ++ FR L ++ +N +TF G+ ++ L L RI +I
Sbjct: 585 ELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTI 644
Query: 152 TPNAFRHLEFTLKHLNLQEN 171
+P AF L +L +NL N
Sbjct: 645 SPGAFTTL-VSLSTINLLSN 663
Score = 76 (31.8 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + ++ I +N +TF G+ ++ L L RI +I+P AF L ++ IN N FN
Sbjct: 607 LKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFN 666
Score = 40 (19.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQL 106
L++L +NN+ I I +FN + I+ L+L
Sbjct: 183 LEILTLNNNNISRILVTSFNHMPKIRTLRL 212
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 118 AFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
A + D I + F + IK L LS+ RI I +AF LE ++ L+L EN+L++VP
Sbjct: 66 ALENADIIE-VGPKAFKTLRIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVP 124
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELN-N 235
L L+ L ++ L NKI I +F + +L+ + L N + ++ ++F ++++
Sbjct: 125 TSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQ 184
Query: 236 NLTLYKN 242
NL L N
Sbjct: 185 NLILDNN 191
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/176 (26%), Positives = 85/176 (48%)
Query: 81 LYINNSAIRNINENTFNGI--FIKNLQLSHCRINSITPNAFRHL----------DAIRNI 128
L ++N+ I I+++ F G+ ++ L LS + + +A L + I NI
Sbjct: 88 LILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENI 147
Query: 129 NENTF-NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
F N + ++ L +I S+ + F +++ +L++L L N + + P + +R++ NL
Sbjct: 148 TTKAFVNMTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRNMNNL 207
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLT-LYKN 242
+ + NKI I + F L +L L L+ NN++ K L+ NL LY N
Sbjct: 208 IALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGG--ALQNTPNLHYLYLN 261
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 51/169 (30%), Positives = 82/169 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF--IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNG 135
L LY+N + ++ ++ NG+ K LQ+ N+ T +I + F G
Sbjct: 255 LHYLYLNENNLQTLD----NGVLEQFKQLQVLDLSFNNFT-----------DITKEMFEG 299
Query: 136 I-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSK 194
+ I++L L RI+++ P AF L L L N L +V +TL+ L ++ LS
Sbjct: 300 LESIQHLNLDSNRISAVAPGAFAGTPLLL--LWLPNNCLTEVSQQTLKGAPFLRMVSLSN 357
Query: 195 NKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
N I ++ + SF L NL TL L++N + +L S G E N + L +N
Sbjct: 358 NNIREVHELSFDHLPNLHTLDLANNKIMSLQNKSLSGPE-NLAVRLQEN 405
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 36 ELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENT 95
E+ ++ + N LS++CN + N T VN +D+ + + I ++ +T
Sbjct: 122 EVPTSALAGLRVLNILSLKCNKIENI-----TTKAFVNMTSLIDV-NLGCNQICSMAADT 175
Query: 96 FNGI--FIKNLQLSHCRINSITPNAFRHLDAI--RNINENTFNGI----FIKNLQLSHCR 147
F + ++NL L + + A R+++ + +I N N I F+ LS
Sbjct: 176 FANVKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLS 235
Query: 148 INSITPNAFRH--LEFT--LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDD 203
+N + + L+ T L +L L EN+L+ + L K L ++DLS N I +
Sbjct: 236 LNGNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKE 295
Query: 204 SFSTLNNLVTLKLSDNNLT-LYKNSFRGLEL 233
F L ++ L L N ++ + +F G L
Sbjct: 296 MFEGLESIQHLNLDSNRISAVAPGAFAGTPL 326
>UNIPROTKB|Q3MHH9 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9913
"Bos taurus" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001007
Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51450
SMART:SM00214 GO:GO:0005578 eggNOG:COG4886 HSSP:P21809
EMBL:BC105232 IPI:IPI00692442 RefSeq:NP_001029769.1
UniGene:Bt.42321 ProteinModelPortal:Q3MHH9 GeneID:533916
KEGG:bta:533916 CTD:1842 HOGENOM:HOG000112319 HOVERGEN:HBG031529
InParanoid:Q3MHH9 KO:K08119 OrthoDB:EOG4868CR NextBio:20876193
Uniprot:Q3MHH9
Length = 680
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 48/129 (37%), Positives = 73/129 (56%)
Query: 123 DAIRNINENTFNGI-FIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
++I +I + FNG+ ++ L LS I S I P AF+ L+ L LN+ N+L +P E
Sbjct: 334 NSITSIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKFLK-NLMRLNMDGNNLVTIPSE 392
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK-NS--FRGLELNNN 236
L+ L + ++NK+ I ++S S LN LVTL+L NNL+ NS F+ L+ +
Sbjct: 393 LPSTLEELKI---NENKLQVIDEESLSDLNQLVTLELEGNNLSETNVNSLAFKPLKSLSY 449
Query: 237 LTLYKNSFR 245
L L +N FR
Sbjct: 450 LRLGRNKFR 458
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 53/190 (27%), Positives = 94/190 (49%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
+LS ND TN + + + N + L + + +S++ + F G+ +++LQ++
Sbjct: 406 DLSGDRNDPTNLQTLR-NMTRMRNMR-SLSISRLGSSSVGPEDFKDF-GVELEDLQITRA 462
Query: 110 RINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQ 169
++ I +AF+H +R + K L S I+SI +AF + +L L +
Sbjct: 463 SLSGIQSHAFKH---VRGL----------KRLDFSENGISSIENDAFHEIGHSLISLKMS 509
Query: 170 EN-DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNS 227
+P E LRHL +L +D S N I + D SF L NL L+L DN + + K +
Sbjct: 510 HGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGT 569
Query: 228 FRGLELNNNL 237
F+G ++++ L
Sbjct: 570 FQG-DIHSKL 578
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/127 (34%), Positives = 68/127 (53%)
Query: 121 HLD--AIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
H++ +R I + L++S + I +AF LE +L L L +NDL ++P
Sbjct: 85 HMENTGLREIEPYFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPS 144
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTL-NNLVTLKLSDNNLT-LYKNSFRGLELNNN 236
++LRHL+ L +DL N I I DSF L ++L TL L +N ++ L +SF GL +
Sbjct: 145 KSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILET 204
Query: 237 LTLYKNS 243
L L N+
Sbjct: 205 LDLSGNN 211
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 47/182 (25%), Positives = 83/182 (45%)
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN 129
+H+ + LD +N+ I ++++ +F+ F+KNL+L H + I +
Sbjct: 523 RHLTSLQELDF---SNNHISSMSDTSFH--FLKNLRLLEL-----------HDNRIEQVL 566
Query: 130 ENTFNGIFIKNLQLSHCRIN---SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ TF G L+ R N SI+ + F LE L+ L+L +N ++++ +L
Sbjct: 567 KGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLE-ALRKLHLDDNKIDKIERRAFMNLDE 625
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFR---GLELNNNLTLYKNS 243
L + L NKI + D+SF L L L ++ N L + + G N N+ + N
Sbjct: 626 LEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQ 685
Query: 244 FR 245
R
Sbjct: 686 IR 687
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 41/155 (26%), Positives = 77/155 (49%)
Query: 101 IKNLQLSHCRINSITPNAFRHLDA----------IRNINENTFNGIFIKNLQLSHCRINS 150
+ NL L + I + PN+F++ D I + E+ F I+ + + +C + +
Sbjct: 280 LDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCGLTN 339
Query: 151 ITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI--PDDSFSTL 208
I+P AF L +L+ L+L N+L ++ + + L +I + NKI KI P ++F+ +
Sbjct: 340 ISPVAFDSLVNSLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKI-KIQKPTETFNAV 398
Query: 209 N-NLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242
+ L+ L LS + +N L+ N+T +N
Sbjct: 399 HYTLLKLDLSGD-----RNDPTNLQTLRNMTRMRN 428
Score = 118 (46.6 bits), Expect = 0.00074, P = 0.00074
Identities = 46/174 (26%), Positives = 82/174 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN-ENTFNGI 136
L++L + + + N N + F+ + LS+ +N ++ N R L + + N G+
Sbjct: 650 LEILDMAFNQLPNFNFDYFDQVGT----LSNLNVN-VSHNQIRQLMYNSSWSGRNEHGGM 704
Query: 137 F---IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLS 193
+ IK L LSH I+ I P FR E +L HL+L N L + ++ +L +DLS
Sbjct: 705 YHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLS 764
Query: 194 KNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFRG 246
N I ++ D+F L + N L+ + ++ F+ ++ + N RG
Sbjct: 765 YNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRG 818
Score = 118 (46.6 bits), Expect = 0.00074, P = 0.00074
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF 100
C CS ++ + + C ++ +P +N+ +KV +L++ N+ +R I
Sbjct: 50 CTCSKSSTDLGIVHCKNVP-FPALPRMVNQ---SKV--FMLHMENTGLREIEPYFLQSTG 103
Query: 101 IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLE 160
+ L++S + I +AF L+ R++ E L L + I + RHL+
Sbjct: 104 MYRLKISGNHLTEIPDDAFTGLE--RSLWE----------LILPQNDLVEIPSKSLRHLQ 151
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKN-LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L+HL+L N + + ++ R L++ L + L +N I ++ SFS L L TL LS N
Sbjct: 152 -KLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGN 210
Query: 220 NL 221
NL
Sbjct: 211 NL 212
Score = 118 (46.6 bits), Expect = 0.00074, P = 0.00074
Identities = 59/206 (28%), Positives = 100/206 (48%)
Query: 51 LSIQCNDLTNYPLFKAT-LNKHV-NTKVPL-DLLYINNSAIRNINENTFNGIFIKNLQLS 107
L I N LT P T L + + +P DL+ I + ++R++ + +++L L
Sbjct: 107 LKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQK-------LRHLDLG 159
Query: 108 HCRINSITPNAFRHL-DAIRNI--NEN--------TFNGIFI-KNLQLSHCRINSITPNA 155
+ I I ++FR L D+++ + EN +F+G+ I + L LS + I PN
Sbjct: 160 YNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNV 219
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIP-DDSF----STLNN 210
F L L L +N L ++P + L LK+L +D+S N I + ++++ ST N
Sbjct: 220 FVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLN 279
Query: 211 LVTLKLSDNNL-TLYKNSFRGLELNN 235
L L L N++ L NSF+ + N
Sbjct: 280 LDNLHLEYNHIEVLPPNSFKYFDTVN 305
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 42/117 (35%), Positives = 65/117 (55%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
IR +N + ++ L L+H I + P AF +L L+ L L+ N L+ +P H
Sbjct: 65 IRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLP-RLRVLRLRGNQLKLIPPGVFTH 123
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
L +LTL+DLS+NK+ + D SF L +L L++ DN+L + + +F GL LTL
Sbjct: 124 LDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTL 180
Score = 131 (51.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 53/190 (27%), Positives = 88/190 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL---DAIRNINENTF 133
L L + ++ + I+ F G+ + L L C + S++P + HL A+R +
Sbjct: 151 LQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLGALR-LRHLAI 209
Query: 134 NGIFIKNLQ----LSHCRINS------ITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
+ +N Q LSH I++ + P + R L T L++ ++ VP LR
Sbjct: 210 AALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGLNLT--SLSITHTNITAVPAAALRQ 267
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLE------LNNN 236
+LT ++LS N I +P SF L L L L+ L + + +F GL L++N
Sbjct: 268 QAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDN 327
Query: 237 L--TLYKNSF 244
L TL +N+F
Sbjct: 328 LLSTLEENTF 337
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 44 SYNTANEL-SIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIFI 101
SYN +E+ S DLTN L + LN + T +P L I ++ + N +
Sbjct: 78 SYNRLSEIDSAAFEDLTN--LQEVYLNSNELTAIPSLGAASIGVVSLF-LQHNKILSVDG 134
Query: 102 KNLQLSHCRINSITPNAFRHLDAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLE 160
L+ S+ + + ++ + I I + F NG+ I+ L L+ RI+ + AF L
Sbjct: 135 SQLK-SYLSLEVLDLSS----NNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLS 189
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
+L L L +N + Q+PV+ + L LT +DL++N+I I +F L++L L+L NN
Sbjct: 190 RSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNN 248
Query: 221 LT-LYKNSFRGLELNNNLTLYKNS 243
++ L +F GL + L L NS
Sbjct: 249 ISRLTDGAFWGLSKMHVLHLEYNS 272
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/188 (29%), Positives = 93/188 (49%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF--------RHLD- 123
K+P L L +N + IR I TF G+ ++ L+L I+ +T AF HL+
Sbjct: 211 KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEY 270
Query: 124 -AIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
++ +N + G+ + L LS+ I+ I + + + L L L N+L ++ E+L
Sbjct: 271 NSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQ-KLHELILSFNNLTRLDEESL 329
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TLYKNS--FRGLELNNNL 237
L +L+++ LS N I I + +F L +L L L N + T+ S F GL+ + L
Sbjct: 330 AELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKL 389
Query: 238 TLYKNSFR 245
TL+ N +
Sbjct: 390 TLFGNKIK 397
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 150 (57.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 148 INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
++++ P AF +L F L+ L L+ N L+ +P+ L NLT +D+S+NKI + D F
Sbjct: 4 VSAVEPGAFNNL-FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 62
Query: 208 LNNLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYK 241
L NL +L++ DN+L + +F GL LTL K
Sbjct: 63 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEK 97
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
YN + L + NDL Y +A +N+ L L N ++I + +G+ + L
Sbjct: 64 YNLKS-LEVGDNDLV-YISHRAFSG--LNSLEQLTLEKCNLTSIPTEALSHLHGLIV--L 117
Query: 105 QLSHCRINSITPNAFRHLDAIR-----------NINENTFNGIFIKNLQLSHCRINSITP 153
+L H IN+I +F+ L ++ + N G+ + +L ++HC + ++
Sbjct: 118 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 177
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
A RHL + L+ LNL N + + L L L I L ++ + +F LN L
Sbjct: 178 LAVRHLVY-LRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 236
Query: 214 LKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +S N LT L +++F + L L N
Sbjct: 237 LNVSGNQLTTLEESAFHSVGNLETLILDSN 266
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 69/254 (27%), Positives = 112/254 (44%)
Query: 6 SPFHLVTLILLTALIQGGSAQC-PWEDESESELQSTCICSYNTANELSIQCNDLTNYPLF 64
SP L+ L L L A P + C C + LS C++L +
Sbjct: 3 SPPGLLALWLCAVLCASARAGSDPQPGPGRPACPAPCHCQEDGIM-LSADCSEL-GLSVV 60
Query: 65 KATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLD 123
A L+ LDL +NN + + F+ + F++ L+LS ++ I AF L
Sbjct: 61 PADLDP---LTAYLDLS-MNN--LTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLH 114
Query: 124 AIR--NINENTFNGI---------FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEND 172
+++ + N GI +++L+L I+ + +F L +L+HL L +N
Sbjct: 115 SLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLS-SLRHLWLDDNA 173
Query: 173 LEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGL 231
L ++PV L +L L + L+ N I IPD +F L +LV L L +N + + +SF GL
Sbjct: 174 LTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGL 233
Query: 232 ELNNNLTLYKNSFR 245
L L N +
Sbjct: 234 HNLETLDLNYNELQ 247
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/106 (34%), Positives = 60/106 (56%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ L+LSH +I + P+ R + L+ + L+ N ++++ +T L +L +DLS N I
Sbjct: 354 LRILELSHNQIEEL-PSLHRCQK--LEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNAI 410
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRG----LELNNNLTL 239
I ++FSTL +LV L L+DN LT + G L+L NL L
Sbjct: 411 RAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLMHLKLKGNLAL 456
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 42/180 (23%), Positives = 83/180 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L+ L ++ + + +I F+G+ +K L L ++ I A L +++++
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 130 ---ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
E +F G+ +++L L + I A +L L+ + L N + +P ++L
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLP-ALQAMTLALNHIRHIPDYAFQNLT 210
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+L ++ L N+I + SF L+NL TL L+ N L + + R L L + N+ +
Sbjct: 211 SLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRTLGRLQELGFHNNNIK 270
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 55/204 (26%), Positives = 90/204 (44%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHC 109
L + N+L +PL TL + L L +N+ I+ I E F G ++ +
Sbjct: 239 LDLNYNELQEFPLAIRTLGR-------LQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDN 291
Query: 110 RINSITPNAFRHLDAIRNINENTFNGI--F--IKN------LQLSHCRINSITPNAFRHL 159
I + +AF++L + ++ N I F +K L L+ I + P + L
Sbjct: 292 PIQFVGRSAFQYLSKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQL 351
Query: 160 EFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L+ L L N +E++P +L + L I L N+I +I D+FS L +L L LS N
Sbjct: 352 P-RLRILELSHNQIEELP--SLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWN 408
Query: 220 NL-TLYKNSFRGLELNNNLTLYKN 242
+ ++ +F L L L N
Sbjct: 409 AIRAIHPEAFSTLRSLVKLDLTDN 432
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 149 (57.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 44/158 (27%), Positives = 82/158 (51%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLS-HCRINSITPNAFR--------HLD--AI 125
L +L+++++A+ +I+ F+G+ ++ L LS + ++ ++ P FR HLD +
Sbjct: 83 LTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGL 142
Query: 126 RNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
R + F G+ ++ L L + ++ +AF L L HL L N + VP R L
Sbjct: 143 RELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLG-NLTHLFLHGNHIPSVPERAFRGL 201
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
+L + L +N++ ++ +F L L+TL L NNL+
Sbjct: 202 HSLDRLLLHQNRVARVHPHAFRDLGRLMTLYLFANNLS 239
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/125 (31%), Positives = 68/125 (54%)
Query: 121 HLDAIRNINENTFNGI-FIKNLQLS-HCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
H +A+ +I+ F+G+ ++ L LS + ++ ++ P FR L L L+L L ++
Sbjct: 89 HSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLG-RLHTLHLDRCGLRELGP 147
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNL 237
R L L + L N + +PDD+FS L NL L L N++ ++ + +FRGL + L
Sbjct: 148 GLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRL 207
Query: 238 TLYKN 242
L++N
Sbjct: 208 LLHQN 212
Score = 112 (44.5 bits), Expect = 0.00097, P = 0.00097
Identities = 42/154 (27%), Positives = 71/154 (46%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFN 134
LDL +N+ +R ++ TF G+ + L L C + + P FR L A++ + +N
Sbjct: 110 LDLS--DNAQLRAVDPATFRGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGLQ 167
Query: 135 GI----FIKNLQLSHC-----RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ F L+H I S+ AFR L +L L L +N + +V R L
Sbjct: 168 ALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLH-SLDRLLLHQNRVARVHPHAFRDLG 226
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L + L N + + ++ + L +L L+L+DN
Sbjct: 227 RLMTLYLFANNLSALSAEALAPLRSLQYLRLNDN 260
>UNIPROTKB|F1NG27 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002756 "MyD88-independent toll-like receptor signaling
pathway" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0032722 "positive regulation of
chemokine production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:LNLGYNI EMBL:AADN02031435
IPI:IPI00590386 Ensembl:ENSGALT00000021952 Uniprot:F1NG27
Length = 900
Score = 152 (58.6 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 59/205 (28%), Positives = 95/205 (46%)
Query: 45 YNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
+ T L+I DL++ L A L K +L+ +N I +N+ F+ N
Sbjct: 147 FKTLENLNIL--DLSHNHLKSANLGLQQQLKNLRELVLYSNQ-ITELNKEDLK--FLSNT 201
Query: 105 QLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLK 164
L+ ++S F H + I N F G+ + N++L R + + ++
Sbjct: 202 SLNSLDLSSNPLKEF-HTGCLHAIG-NLF-GLILNNVELGENRTKKLCTELS---DTAIQ 255
Query: 165 HLNLQENDLEQVPVETLRHLK--NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL- 221
+L+L L + TL+ L+ NLT+++LSKN + I DDSF L+ L L L DNN+
Sbjct: 256 NLSLSHVKLSHINRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNII 315
Query: 222 TLYKNSFRGLELNNNLTLYKNSFRG 246
+ + F GL +L L NS G
Sbjct: 316 NVSSHLFYGLSSITHLNLI-NSLTG 339
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 94 NTFNGIFIKNLQLSHCRINSI----TPNAFRHLDA----IRNINENTFNGIFIKNLQLSH 145
N F G+ + N++L R + + A ++L + +IN T G+ NL + +
Sbjct: 226 NLF-GLILNNVELGENRTKKLCTELSDTAIQNLSLSHVKLSHINRLTLQGLQGTNLTVLN 284
Query: 146 CRINSIT---PNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD 202
NS++ ++F+ L L++LNL++N++ V L ++T ++L + GKI D
Sbjct: 285 LSKNSLSVIEDDSFQWLS-KLEYLNLEDNNIINVSSHLFYGLSSITHLNLINSLTGKIED 343
Query: 203 DSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLY 240
SF L++L L + +NN + N F GL+ L+LY
Sbjct: 344 FSFQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLY 382
Score = 122 (48.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 44 SYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKN 103
S+ + L D N+P + + L L Y N+ ++ I TF +
Sbjct: 345 SFQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSL-YNCNTNLQRITNKTFVSLANSR 403
Query: 104 LQ---LSHCRINSITPNAFRHLDAIR----NINE-------NTFNGIF-IKNLQLSHCRI 148
LQ L+ RI+++ AF L ++ +NE + F G+ I+ + LS+ +
Sbjct: 404 LQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKN 463
Query: 149 NSITPNAFRHLEFTLKHLNLQE---NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
++ +F + +L+ L L++ N+L P L+NLT++D+S N I I +D F
Sbjct: 464 VTLRSESFIFVP-SLRKLMLRKVGCNNLAISP-SPFHPLRNLTVLDISNNNIANIREDLF 521
Query: 206 STLNNLVTLKLSDNNLT-LYK 225
+ L+ L L L NNL L+K
Sbjct: 522 NGLHELDILNLQHNNLARLWK 542
Score = 36 (17.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 218 DNNLTLYKNSFRGLELNNNLTLYKNSFR 245
D+ + ++ ++ + +LN+ L L + FR
Sbjct: 841 DSIILIFLHNIQDYKLNHALCLRRGMFR 868
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 65/242 (26%), Positives = 112/242 (46%)
Query: 12 TLILLTAL-IQGGSAQCPWEDE-SESELQSTCICSYNTANELSIQCN----DLTNYPLFK 65
T++LL L + CP S L+ C + TA + N DL+ L K
Sbjct: 13 TVLLLWCLNLSAADLPCPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQL-K 71
Query: 66 ATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDA 124
+ ++ L+ L ++ + I I TF G+ ++ L++ + R+ + F L
Sbjct: 72 TLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSN 131
Query: 125 IR--NINEN--------TFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
+R +I+EN TF + ++ L + I+ AF L+ LK LN+ ++L
Sbjct: 132 LRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQ-ALKELNVDRSNL 190
Query: 174 EQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSD-NNLT-LYKNSFRGL 231
+P E L L++LT + L K I +P+++F L+ L TL++ ++L L NS GL
Sbjct: 191 TSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGL 250
Query: 232 EL 233
L
Sbjct: 251 NL 252
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 54 QCNDLTNYPLFKATLNKHVNTKV----PLDLLYINN-SAIRNINENTFNGIFIKNLQLSH 108
Q LT L K T++ N L L I + S++ +N N+ G+ + L L++
Sbjct: 200 QLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGLNLTTLVLTN 259
Query: 109 CRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNL 168
C +++I + RHL +++ L LS+ I SI N L L+ L+L
Sbjct: 260 CNLSAIPYSPLRHL-------------AYLQYLDLSYNPITSIQGNLLGDL-LRLQELHL 305
Query: 169 QENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+L Q+ R L L+++S N++ + + +F ++ NL TL+L N L
Sbjct: 306 VGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPL 358
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 68 LNKHVNTKVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL--- 122
+ +V ++P L LY++ + I + F G+ ++ L LSH R+ + + F L
Sbjct: 233 IKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGL 292
Query: 123 -------DAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLE 174
+AI ++ TF + F++ LQL H RI + +F L L+ L L N L+
Sbjct: 293 RVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLG-QLEVLTLDHNQLQ 351
Query: 175 QVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLEL 233
+V L N+ +++LS N + +P+ F L L +L L + L + ++F GL
Sbjct: 352 EVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSG 411
Query: 234 NNNLTLYKNSFRG 246
L L N G
Sbjct: 412 LRRLFLKDNGLVG 424
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 80 LLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI 136
++ ++ + +RN+ E F G+ + +L L + I P+ F L +R + +N GI
Sbjct: 366 VMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGI 425
Query: 137 FIKNLQ-LSHCRINSITPNAFRHLEFTL-------KHLNLQENDLEQVPVETLRHLKNLT 188
++L L+ +T N HL L ++L L N L ++P + L L+
Sbjct: 426 EEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAF 485
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
+D+S N++ +P+ + L L L L +N+L + GLE
Sbjct: 486 WLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGLE 529
Score = 124 (48.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 44/140 (31%), Positives = 69/140 (49%)
Query: 104 LQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTL 163
L L ++S+ P AF++L ++ G F+ NLQ ++ S+ P A LE L
Sbjct: 79 LWLDGNNLSSVPPAAFQNLSSL---------G-FL-NLQGG--QLGSLEPQALLGLE-NL 124
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
HL+L+ N L + + T H L + LS N++ ++ D F L +L L L N+L +
Sbjct: 125 CHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAV 184
Query: 224 YKNS-FRGLELNNNLTLYKN 242
++ FRGL L L N
Sbjct: 185 LPDAAFRGLGSLRELVLAGN 204
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 48/178 (26%), Positives = 81/178 (45%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI----NENT--- 132
L ++N+ + + + F G+ + +L L + + AFR L ++R + N
Sbjct: 151 LGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQ 210
Query: 133 ---FNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
F+G+ ++ L LS + +I N F L L+ L L N + V LK L
Sbjct: 211 PALFSGLAELRELDLSRNALRAIKANVFVQLP-RLQKLYLDRNLIAAVAPGAFLGLKALR 269
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSFR 245
+DLS N++ + +D+F L L L+LS N + +L +F+ L L L N R
Sbjct: 270 WLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIR 327
>RGD|1308170 [details] [associations]
symbol:Cd180 "CD180 molecule" species:10116 "Rattus norvegicus"
[GO:0002322 "B cell proliferation involved in immune response"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
RGD:1308170 InterPro:IPR000483 SMART:SM00082 CTD:4064 KO:K06555
OrthoDB:EOG4W3SMG GeneTree:ENSGT00700000104185 OMA:TEAFKEC
EMBL:CH473955 IPI:IPI00360317 RefSeq:NP_001099875.1
UniGene:Rn.148663 Ensembl:ENSRNOT00000013768 GeneID:294706
KEGG:rno:294706 UCSC:RGD:1308170 NextBio:638441 Uniprot:D3ZIP2
Length = 662
Score = 150 (57.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 60/207 (28%), Positives = 94/207 (45%)
Query: 31 DESESELQSTCICSYNTANELSIQCNDLT-NYPL-FKATLNKHVNTKVPLDLLYINNSAI 88
D S +++++ C+ N +Q +L+ N PL + K LDL + +
Sbjct: 377 DLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLGLRTEAFKECPQLELLDLAF-TRLHV 435
Query: 89 RNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTF-NGIFIKN--LQ- 142
++ N +K L LSHC + S + L A+R++N N F NG K LQ
Sbjct: 436 KDAQSPFQNLHLLKVLNLSHCLLGSSNQHLLDGLPALRHLNLQGNRFPNGNIQKTNPLQA 495
Query: 143 --------LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSK 194
LS C ++SI AF +L+ + H++L N L +E L HLK + L +L+
Sbjct: 496 LGSLEILILSFCDLSSIDHQAFINLKI-MNHVDLSHNRLTSSSIEALSHLKGIYL-NLAS 553
Query: 195 NKIGKIPDDSFSTLNNLVTLKLSDNNL 221
N+I IP L+ T+ L N L
Sbjct: 554 NRISIIPPSLLPVLSQQRTINLRQNPL 580
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 148 (57.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 48/174 (27%), Positives = 86/174 (49%)
Query: 83 INNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFR-----------HLDAIRNINE 130
++ ++++ ++E F + +K L L + I+ ITP AF+ H + IR ++
Sbjct: 65 LDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHT 124
Query: 131 NTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTL 189
TF + + L LS C + ++ F + TLK L +N+ +VP LR ++NLT
Sbjct: 125 RTFTALKRLVRLDLSDCNLFNMPDRIFLE-QITLKELLCFQNNFRRVP-GALRGMENLTH 182
Query: 190 IDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+ L +NKI + +S L +L L L +N + ++ +F+ L N L N
Sbjct: 183 VYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDN 236
Score = 141 (54.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 51/164 (31%), Positives = 77/164 (46%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
+Y+ + I + N+ G+ +K L L RIN I AF+ D IR ++
Sbjct: 183 VYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFK--DLIR-----------LE 229
Query: 140 NLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK 199
N L+ + + AF+ L LK LNL N L V L L ++ L +N++
Sbjct: 230 NFYLNDNLLVDLPQQAFKGLS-NLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSY 288
Query: 200 IPDDSFSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNLTLYKN 242
I D SF L +L+TL L+ NNLT S F+ + L L++N
Sbjct: 289 IEDGSFENLTSLITLHLNSNNLTSLPFSVFQPIYFIGRLYLFRN 332
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCR----INSITPNAFRHLDAIRNINENT 132
L L Y NN I I F G+ + L+++H +++ T A + L + + N
Sbjct: 87 LSLKY-NN--ISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNL 143
Query: 133 FN---GIFIKNLQLSH--CRINSI--TPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
FN IF++ + L C N+ P A R +E L H+ L+ N +E V +L L
Sbjct: 144 FNMPDRIFLEQITLKELLCFQNNFRRVPGALRGME-NLTHVYLERNKIEAVAYNSLLGLT 202
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+L ++L +N+I I D++F L L L+DN L L + +F+GL L L N
Sbjct: 203 SLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGN 260
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 149 (57.5 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 62/239 (25%), Positives = 106/239 (44%)
Query: 10 LVTLILLTA----LIQGGSAQCPWEDESESELQSTCICSYNTANE-LSIQCNDLT-NYPL 63
L L+LL A L G CP+ E ++ ++ E +S+ C L+ Y
Sbjct: 10 LAGLLLLQASSLLLFSSGERMCPYSCHCEGKIVHCESSAFQDVPENISVSCQGLSLRYND 69
Query: 64 FKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL 122
L L LY++++ I ++ F G+ +K L LS RI+ + H
Sbjct: 70 LHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQL------H- 122
Query: 123 DAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
N+ TF+G+ +++L LS+ ++ + P F L L++L+L+ N L +PV
Sbjct: 123 ----NV---TFHGVPNLRSLDLSYNKLQELQPGQFYGLR-KLQNLHLRSNGLTAIPVRAF 174
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY 240
++L +DL N++ + +F L+ L+ L L N + N F L N LY
Sbjct: 175 LECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRI-NFFLFPRLANLRALY 232
>TAIR|locus:2825384 [details] [associations]
symbol:RLP12 "AT1G71400" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0007165
"signal transduction" evidence=IC;RCA] [GO:0002237 "response to
molecule of bacterial origin" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
eggNOG:COG4886 EMBL:AC016163 InterPro:IPR013210 Pfam:PF08263
EMBL:BX817184 IPI:IPI00528712 RefSeq:NP_177296.2 UniGene:At.17912
ProteinModelPortal:Q9C9H7 SMR:Q9C9H7 PaxDb:Q9C9H7 PRIDE:Q9C9H7
EnsemblPlants:AT1G71400.1 GeneID:843481 KEGG:ath:AT1G71400
TAIR:At1g71400 HOGENOM:HOG000116562 InParanoid:Q9C9H7 OMA:RGPWNKS
ProtClustDB:CLSN2679241 Genevestigator:Q9C9H7 Uniprot:Q9C9H7
Length = 847
Score = 151 (58.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 56/212 (26%), Positives = 100/212 (47%)
Query: 36 ELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENT 95
EL+ + + + + I +LT +F + N +T P D+ +N +++ N+
Sbjct: 255 ELRVMSFENNSLSGNIPISFANLTKLSIFVLSSNNFTST-FPFDMSIFHNLEYFDVSYNS 313
Query: 96 FNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNA 155
F+G F K+L L + SI + I N T + +++L L R++ P +
Sbjct: 314 FSGPFPKSLLLIPS-LESIYLQENQFTGPIEFAN--TSSSTKLQDLILGRNRLHGPIPES 370
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI-GKIPDDSFSTLNNLVTL 214
L L+ L++ N+ T+ L NL +DLSKN + G++P + L L T+
Sbjct: 371 ISRL-LNLEELDISHNNFTGAIPPTISKLVNLLHLDLSKNNLEGEVP----ACLWRLNTM 425
Query: 215 KLSDNNLTLYKNSFRGLELNNNLTLYKNSFRG 246
LS N+ + ++N+ + L L L NSF+G
Sbjct: 426 VLSHNSFSSFENTSQEEALIEELDLNSNSFQG 457
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 68/248 (27%), Positives = 116/248 (46%)
Query: 9 HLVTLILLTALIQG--GSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKA 66
H++ + +T L+Q CP E T Y A+ ++ CNDL F A
Sbjct: 9 HVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEAS--TVDCNDL-GLLTFPA 65
Query: 67 TLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIR 126
L NT++ L L NN I I +T + + L LS ++S+T + + +
Sbjct: 66 RLP--ANTQILL--LQTNN--IAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLL 119
Query: 127 NI--NENTFNGI------FIKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQ 175
++ EN + + NLQ ++H +++I+P AF L L+ L+L N L+
Sbjct: 120 SVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLR-LHLNSNRLQM 178
Query: 176 VPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELN 234
+ + L NL ++ + +N I +I D +F L NL +L ++ NLT + N+ GLE
Sbjct: 179 INSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENL 238
Query: 235 NNLTLYKN 242
+++ Y N
Sbjct: 239 ESISFYDN 246
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 61/207 (29%), Positives = 95/207 (45%)
Query: 31 DESESELQS-TCICSYNTANELSIQC--NDLTNYPLFKATLNKHVNTKVPLDLLYINNSA 87
D S++ L S T I LS+ N LT P + L++ N L LYIN++
Sbjct: 98 DLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELP--EKCLSELSN----LQELYINHNL 151
Query: 88 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLD--AIRNINEN--------TFNGI 136
+ I+ F G+ + L L+ R+ I F L I I EN F +
Sbjct: 152 LSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPL 211
Query: 137 F-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
+++L ++ + I NA LE L+ ++ +N L +VP L+ + NL +DL+KN
Sbjct: 212 INLRSLVIAGINLTEIPDNALVGLE-NLESISFYDNRLIKVPHVALQKVVNLKFLDLNKN 270
Query: 196 KIGKIPDDSFSTLNNLVTLK-LSDNNL 221
I +I FS N++ LK L NN+
Sbjct: 271 PINRIRRGDFS---NMLHLKELGINNM 294
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 149 (57.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 43/132 (32%), Positives = 69/132 (52%)
Query: 116 PNAFRHLDAIRN----INENTFNGIFI-KNLQLSHCRINSITPNAFRHLEFTLKHLNLQE 170
P R LD +N + F+ + + + L LS+ ++S+ PN+FR + L+ L L+
Sbjct: 55 PIETRSLDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFR-AQPRLRSLRLRS 113
Query: 171 NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR 229
N L +P L L LTL+D+S+N++ + D F L L+LSDN L + +F
Sbjct: 114 NQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFS 173
Query: 230 GLELNNNLTLYK 241
GL +LTL +
Sbjct: 174 GLASLRSLTLQR 185
>RGD|1305567 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10116 "Rattus norvegicus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1305567 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH473979 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414
eggNOG:NOG323197 KO:K16356 OMA:WAVGEEE OrthoDB:EOG43TZV6
EMBL:BC158862 IPI:IPI00367086 RefSeq:NP_001100972.1
UniGene:Rn.50030 ProteinModelPortal:B0BNK7
Ensembl:ENSRNOT00000028275 GeneID:308495 KEGG:rno:308495
UCSC:RGD:1305567 NextBio:659014 Genevestigator:B0BNK7
Uniprot:B0BNK7
Length = 626
Score = 149 (57.5 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 58/224 (25%), Positives = 99/224 (44%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN 69
+ L LL L+ A P + + S C C + LS+ C +L+
Sbjct: 1 MAVLPLLLCLLPLAPASSPPQPATSSPCPRRCRCQTQSL-PLSVLCPG-AGLLFVPPSLD 58
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------H 121
+ ++ L +I +A+R + G+ +L LS I + AF H
Sbjct: 59 RRA-AELRLADNFI--AAVRRRDLANMTGLL--HLSLSRNTIRHVAAGAFADLRALRALH 113
Query: 122 LDAIR--NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
LD R ++ E G+ +++L LS+ ++ ++ A TL+ L+L N+LEQ+P
Sbjct: 114 LDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPW 173
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
E L L N+ + L N + +P +FS L+ L L ++ N LT
Sbjct: 174 EALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLT 217
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 153 (58.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 70 KHVNTKVP--LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF---RHLD 123
K++ +P + L +N + + IN N F G+ +++ LQL +I ++ AF R L+
Sbjct: 46 KNIPRNIPRNTERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELE 105
Query: 124 AIRNINENTFNGI----FIKN-----LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLE 174
+R +N N + + F KN L LS I +I AFR +K+L L +N +
Sbjct: 106 RLR-LNRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGAT-DIKNLQLDKNHIS 163
Query: 175 QVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ R ++ L ++ L+ N I IP SF+ + L T +L NNL
Sbjct: 164 CIEDGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNL 210
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/120 (31%), Positives = 63/120 (52%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
+ IN N F G+ +++ LQL +I ++ AF + L+ L L N L Q+P +
Sbjct: 66 LTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMR-ELERLRLNRNQLHQLPELLFQK 124
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN----SFRGLE---LNNN 236
L+ +DLS+N I IP +F ++ L+L N+++ ++ + RGLE LNNN
Sbjct: 125 NAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNN 184
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 39/124 (31%), Positives = 64/124 (51%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
++I++I F+ ++ + LS+ +I+ + P+AF+ L +L L L N + +P
Sbjct: 312 NSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITDLPRGVF 370
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLY 240
L L L+ L+ NKI + ++F L NL L L DN + TL K +F L L L
Sbjct: 371 DGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLA 430
Query: 241 KNSF 244
+N F
Sbjct: 431 QNPF 434
Score = 118 (46.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 34/108 (31%), Positives = 56/108 (51%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+K + LS+ +I+ I AF ++ L+L N L+ R L+ L ++ L N+I
Sbjct: 560 LKKINLSNNKISEIEDGAFEGAS-SVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRI 618
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSF 244
I ++SF+ L+N+ L L DN LT + +F L+ + L L N F
Sbjct: 619 SCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPF 666
Score = 112 (44.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 163 LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
+ L L N L VP E L K+L L+DLS N+I + + SF+ ++ L TL LS N L
Sbjct: 756 ITELYLDGNQLSTVPKE-LSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALR 814
Query: 223 LYKN-SFRGLELNNNLTLYKN 242
+F GL L+L+ N
Sbjct: 815 CIPTLAFSGLRSLRLLSLHGN 835
Score = 82 (33.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 35 SELQSTCICSYNTANELSIQCN--DLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNIN 92
SE++ ++ NEL + N DL + +F+ L +L + N+ I I+
Sbjct: 571 SEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEG--------LRMLMLRNNRISCIH 622
Query: 93 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFNGIFIKNLQLSHCRIN 149
N+F G+ ++ L L + +I P AF L ++ +N N FN + LS N
Sbjct: 623 NNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPFN-CNCRLAWLSSWLRN 681
Query: 150 S--ITPNAFRHLEFTLKHLNLQE 170
+T N H LK + LQ+
Sbjct: 682 RKIVTGNPRCHRPAFLKEIPLQD 704
Score = 57 (25.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 35 SELQSTCICSYNTANELSIQCNDLTNYPLFKATLNK-HVNTKVPLDLLYINNSAIRNINE 93
SEL + N L + N +T+ P + + H L LL +N + I +
Sbjct: 339 SELAPDAFQGLRSLNSLVLYGNKITDLP--RGVFDGLHA-----LQLLLLNANKIHCLRA 391
Query: 94 NTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTF 133
NTF + + L L +I ++ F L AI+ ++ +N F
Sbjct: 392 NTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQNPF 434
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 149 (57.5 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 54/192 (28%), Positives = 97/192 (50%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF 100
C+C N + L+I C T LF T+ ++ L +I +A++ + N
Sbjct: 24 CMCQ-NLSPSLAILCAK-TGL-LFVPTVIDRRTVELRLTENFI--TAVKR--RDFANMTS 76
Query: 101 IKNLQLSHCRINSITPNAFR--------HLDAIRN--INENTFNGIF-IKNLQLSHCRIN 149
+ +L LS I+ I P F HLD+ R I ++ F G+ +++L L++ +++
Sbjct: 77 LLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANNQLH 136
Query: 150 SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLN 209
+I+P+AF TL+ L+L N+L +P +T+ L N+ +++ N I +P FS L+
Sbjct: 137 NISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLH 196
Query: 210 NLVTLKLSDNNL 221
L L ++ N L
Sbjct: 197 KLARLDMTSNKL 208
>UNIPROTKB|E2RPH7 [details] [associations]
symbol:ECM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070052 "collagen V binding" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0010811 "positive regulation of cell-substrate adhesion"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005614 "interstitial matrix" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51450 SMART:SM00214 GO:GO:0030198 GO:GO:0008201
GO:GO:0010811 GeneTree:ENSGT00700000104006 GO:GO:0005614
InterPro:IPR026906 Pfam:PF13306 OMA:AVWSPKP EMBL:AAEX03000683
Ensembl:ENSCAFT00000003615 Uniprot:E2RPH7
Length = 700
Score = 148 (57.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 45/129 (34%), Positives = 72/129 (55%)
Query: 123 DAIRNINENTFNGI-FIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
++I I + FNG+ ++ L LS I S I P AF+ L+ L LNL N+L ++P E
Sbjct: 354 NSITAIPDEAFNGLPNLERLDLSKNNITSPGIGPKAFKRLK-KLMRLNLDGNNLAEIPSE 412
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRGLELNNN 236
L+ L + ++N + + ++S S LN LVTL+L NNL+ + +F+ L+ +
Sbjct: 413 LPSALEELKI---NENGLQAVSEESLSDLNQLVTLELEGNNLSETNVNPLAFKSLKSLSY 469
Query: 237 LTLYKNSFR 245
L L +N FR
Sbjct: 470 LRLGRNKFR 478
Score = 40 (19.1 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 39 STCICSYNTANELSIQCNDLTNYPL 63
+TC+CS + C+++T +PL
Sbjct: 126 TTCLCSNGR-----VLCDEMTCHPL 145
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 149 (57.5 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 69/250 (27%), Positives = 119/250 (47%)
Query: 9 HLVTLILLTALIQGGSAQ--CPWEDESESELQSTCICSYNTANELSIQCNDL--TNYPLF 64
H++ + +TAL+Q G + CP E T Y A+ ++ CNDL N+P
Sbjct: 9 HVLLGLAITALVQAGDKKVDCPQLCTCEIRPWFTPRSIYMEAS--TVDCNDLGLLNFP-- 64
Query: 65 KATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDA 124
A L +T++ L L NN I I +T + + L LS ++S+T + +
Sbjct: 65 -ARLP--ADTQILL--LQTNN--IARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQ 117
Query: 125 IRNI--NENTFNGI------FIKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
+ ++ EN + + NLQ ++H +++I+P AF L L+ L+L N L
Sbjct: 118 LLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLR-LHLNSNRL 176
Query: 174 EQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLE 232
+ + + L NL ++ L N I +I D +F L L +L ++ NLT + ++ GLE
Sbjct: 177 QMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLE 236
Query: 233 LNNNLTLYKN 242
+++ Y N
Sbjct: 237 NLESISFYDN 246
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 150 (57.9 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 53/187 (28%), Positives = 93/187 (49%)
Query: 72 VNTKVPLD--LLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR-- 126
+ T +P + +L ++++ I +I+++ G F++ L +S+ I I F +L ++
Sbjct: 46 IPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKIL 105
Query: 127 NINENTFNGIFIKNLQLSHC-----RINSITPNAFRHLEF--TLKHLNLQENDLEQVPVE 179
NI +N I + +L H R N I+ L + ++ ++L N + +P
Sbjct: 106 NIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKP 165
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLT 238
T N+ +DL+ N I I D FS+ N LVTLKL+ N++T L + SF L +L
Sbjct: 166 TTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLD 225
Query: 239 LYKNSFR 245
L +N R
Sbjct: 226 LTRNMIR 232
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/210 (24%), Positives = 103/210 (49%)
Query: 47 TANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQ 105
T+ +++I+ DL + + + H ++ L L + + I +N+ +F+ + +++L
Sbjct: 167 TSAKVNIEKLDLASNSITDIGTD-HFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLD 225
Query: 106 LSHCRINSITPNAFRHLDAIRNIN--ENTF----NGIF-----IKNLQLSHCRINSITPN 154
L+ I + AF L +++N++ N +G+F +K+L LS R+ ++T
Sbjct: 226 LTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEG 285
Query: 155 AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTL 214
L +L+ L+L N ++ + + H L + L N+I +P SF L L L
Sbjct: 286 WMFGLT-SLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEEL 344
Query: 215 KLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
LS N++ +L+K + G+ + L L N+
Sbjct: 345 ILSANSIDSLHKFALVGMSSLHKLDLSSNT 374
>UNIPROTKB|F1N7G4 [details] [associations]
symbol:ISLR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 CTD:57611 OMA:PRASYLE
GeneTree:ENSGT00700000104028 EMBL:DAAA02052518 IPI:IPI01001322
RefSeq:XP_002696730.1 UniGene:Bt.86635 Ensembl:ENSBTAT00000003445
GeneID:617436 KEGG:bta:617436 NextBio:20900664 Uniprot:F1N7G4
Length = 750
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 34/108 (31%), Positives = 61/108 (56%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ +L L+H + ++ P + L LK+L+L N + P LR+L L L+ ++ N++
Sbjct: 77 VTSLWLAHNEVRTVEPGSLAVLS-QLKNLDLSHNLISSFPWSDLRNLSALQLLKMNHNRL 135
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
G +P D+ L +L +L++++N L TL +F L ++L LY N F
Sbjct: 136 GSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHNPF 183
>UNIPROTKB|I3LFJ7 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:CU582950
Ensembl:ENSSSCT00000023085 Uniprot:I3LFJ7
Length = 477
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 66/248 (26%), Positives = 111/248 (44%)
Query: 12 TLILLTALIQG-GSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNK 70
+L+ A+I G SAQ ED S + C+CS + S++C+ +A L +
Sbjct: 2 SLLPAPAVILGLRSAQAA-EDACASACPAACVCS-SVERGCSVRCD--------RAGLLR 51
Query: 71 HVNTKVPLDLLYIN--NSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFR------- 120
V + P + I+ + +R + E F + ++ L L H ++ ITP AF+
Sbjct: 52 -VPAEFPCEAASIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAE 110
Query: 121 ----HLDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQ 175
H +R ++ TF + ++ L L+ CR+ S+ L L+ L +N +
Sbjct: 111 LRLAHNGDLRYLHARTFAALGRLRRLDLAACRLFSVPERLLAELP-ALRELAAFDNLFRR 169
Query: 176 VPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELN 234
VP LR L NLT L +++I + S L L +L L N + T++ +FR
Sbjct: 170 VP-GALRGLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQANRVRTVHGGAFRDCGSL 228
Query: 235 NNLTLYKN 242
+L L N
Sbjct: 229 EHLLLNDN 236
>UNIPROTKB|Q1RMS4 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9913 "Bos taurus" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 GO:GO:0030425 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352
GeneTree:ENSGT00660000095307 EMBL:BC114740 IPI:IPI00689182
RefSeq:NP_001070427.1 UniGene:Bt.55363 ProteinModelPortal:Q1RMS4
Ensembl:ENSBTAT00000000176 GeneID:767839 KEGG:bta:767839 CTD:79414
eggNOG:NOG323197 InParanoid:Q1RMS4 KO:K16356 OMA:WAVGEEE
OrthoDB:EOG4H465G NextBio:20918207 Uniprot:Q1RMS4
Length = 628
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/224 (25%), Positives = 98/224 (43%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN 69
+ L LL L+ A P + S S C C + LS+ C +L+
Sbjct: 1 MAVLPLLLCLLPLAPASSPPQPASPSPCPRRCRCQTQSL-PLSVLCPG-AGLLFVPPSLD 58
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------H 121
+ ++ L +I + +R + G+ +L LS I + AF H
Sbjct: 59 RRA-AELRLADNFI--ATVRRRDLANMTGLL--HLSLSRNTIRHVAAGAFSDLRALRALH 113
Query: 122 LDAIR--NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
LD R ++ E G+ +++L LS+ ++ ++ A TL+ L+L N+LEQ+P
Sbjct: 114 LDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPW 173
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
E L L N+ + L N + +P +FS L+ L L ++ N LT
Sbjct: 174 EALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLT 217
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIR--NINENTFN 134
LDL +NN + + F + F++ L+LS ++ I AF L +++ + N
Sbjct: 70 LDLS-MNN--LTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLG 126
Query: 135 GIFIKNL----QLSHCRIN----SITPN-AFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
GI + L L R++ S+ P+ +F L L+HL L +N L +VPV L L
Sbjct: 127 GIPAEALWELPSLQSLRLDANLISLVPDGSFEGLP-ALRHLWLDDNALTEVPVGALSSLP 185
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSF 244
L + L+ N+I +PD +F L++LV L L +N + L +SF GL L L N
Sbjct: 186 ALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNEL 245
Query: 245 R 245
+
Sbjct: 246 Q 246
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
L+LSH +I + P+ R + L+ + LQ N + ++ +T L +L +DLS N I I
Sbjct: 356 LELSHNQIQGL-PSLHRCQK--LEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIRSI 412
Query: 201 PDDSFSTLNNLVTLKLSDNNLTLYKNSFRG----LELNNNLTL 239
++F+TL LV L L+ N LT+ + G L+L NL L
Sbjct: 413 HPEAFATLRALVKLDLTHNQLTMLPLAGLGGLVHLKLKGNLGL 455
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/162 (29%), Positives = 83/162 (51%)
Query: 83 INNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL 141
++ + I +I F+G++ +K L L + +++ I A R L ++++ + NL
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDA-------NL 54
Query: 142 QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIP 201
I+ + +F L+ +L+HL L +N L ++PV L L L + L+ N+I +IP
Sbjct: 55 ------ISVVPEESFEGLQ-SLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIP 107
Query: 202 DDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
D +F L++LV L L +N + L N F GL L L N
Sbjct: 108 DYAFQNLSSLVVLHLHNNRIQRLGANGFDGLHNLETLDLNYN 149
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 142 QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIP 201
+LS +I+SI AF L ++LK L LQ N L ++P E LR L NL + L N I +P
Sbjct: 1 RLSGNQISSIPGEAFSGL-YSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVP 59
Query: 202 DDSFSTLNNLVTLKLSDNNLT 222
++SF L +L L L DN LT
Sbjct: 60 EESFEGLQSLRHLWLDDNALT 80
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 33/84 (39%), Positives = 47/84 (55%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ L+LSH +I + P+ F + L+ L LQ N + ++ +T L L IDLS N I
Sbjct: 259 LRVLELSHNKIEDL-PS-FHRCQ-RLEELGLQHNRIHEIRADTFVQLTALRSIDLSWNDI 315
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL 221
I D+F TL +L L LSDN L
Sbjct: 316 HFIHPDAFVTLRSLTKLDLSDNRL 339
>UNIPROTKB|O42235 [details] [associations]
symbol:KERA "Keratocan" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:11081 KO:K08123 OrthoDB:EOG4KSPK3
EMBL:AF022890 IPI:IPI00588620 RefSeq:NP_989507.1 UniGene:Gga.4837
ProteinModelPortal:O42235 Ensembl:ENSGALT00000018391 GeneID:373995
KEGG:gga:373995 InParanoid:O42235 OMA:RWINLNK NextBio:20813523
Uniprot:O42235
Length = 353
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 44/127 (34%), Positives = 66/127 (51%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRI--NSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I I+E F N ++ + L+ +I N I L+ L +L L++N+LE+VP
Sbjct: 84 IETISEKPFVNATHLRWINLNKNKITNNGIESGVLSKLK-RLLYLFLEDNELEEVPAPLP 142
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL---TLYKNSFRGLELNNNLT 238
L+ L L ++NKI +IP+ FS L NL L L NNL L ++F+GL L
Sbjct: 143 VGLEQLRL---ARNKISRIPEGVFSNLENLTMLDLHQNNLLDSALQSDTFQGLNSLMQLN 199
Query: 239 LYKNSFR 245
+ KNS +
Sbjct: 200 IAKNSLK 206
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 37/144 (25%), Positives = 69/144 (47%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
LY+ N+ I I+E F N ++ + L+ N IT N + + + +F++
Sbjct: 77 LYLQNNLIETISEKPFVNATHLRWINLNK---NKITNNGIES-GVLSKLKRLLY--LFLE 130
Query: 140 NLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI-- 197
+ +L P L L+ L L N + ++P +L+NLT++DL +N +
Sbjct: 131 DNELEEVP----AP-----LPVGLEQLRLARNKISRIPEGVFSNLENLTMLDLHQNNLLD 181
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL 221
+ D+F LN+L+ L ++ N+L
Sbjct: 182 SALQSDTFQGLNSLMQLNIAKNSL 205
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 58/225 (25%), Positives = 104/225 (46%)
Query: 29 WEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN--KHVNTKV----P-LDLL 81
W ES+ +YN E+ +N L N +N + P L+ L
Sbjct: 90 WNISLESQTLQEVKMNYNELTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALESL 149
Query: 82 YINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL 141
++++ I I ++F + +K L LS+ RI ++ F +N + + + +
Sbjct: 150 DLSSNIISEIKTSSFPRMQLKYLNLSNNRITTLEAGCF----------DNLSSSLLV--V 197
Query: 142 QLSHCRINSITPNAFR--HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK 199
+L+ R++ I P F+ HL+F L L+ N ++ V T + L +L + + +N I K
Sbjct: 198 KLNRNRMSMIPPKIFKLPHLQF----LELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISK 253
Query: 200 IPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+ D +F LNN+ L+L NNLT + K GL + L + +N+
Sbjct: 254 LKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNA 298
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 48/180 (26%), Positives = 91/180 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
++ L + ++ + +N+ G+ ++ L +S I I+P+A+ + + ++E
Sbjct: 265 MEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAW---EFCQRLSE------ 315
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
L LS+ ++ + +AF L L+ LNL +N + + R L NL +DL N+
Sbjct: 316 ----LDLSYNQLTRLDESAFVGLSL-LERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNE 370
Query: 197 IG-KIPD--DSFSTLNNLVTLKLSDNNL-TLYKNSFRGLE------LNNN--LTLYKNSF 244
I I D ++F+ L +L L L N + ++ K +F GLE LNNN +++ +N+F
Sbjct: 371 ISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAF 430
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 47/188 (25%), Positives = 84/188 (44%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF------RHLDAIR 126
K+P L L + + I+ + TF G+ +++L++ I+ + AF L+
Sbjct: 213 KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEH 272
Query: 127 N----INENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
N +N+ G+ ++ L +S I I+P+A+ + L L+L N L ++
Sbjct: 273 NNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQ-RLSELDLSYNQLTRLDESAF 331
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY----KNSFRGLELNNNL 237
L L ++L N++ I D F L+NL TL L +N ++ +F GL L
Sbjct: 332 VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKL 391
Query: 238 TLYKNSFR 245
L N +
Sbjct: 392 ILQGNQIK 399
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 57/253 (22%), Positives = 112/253 (44%)
Query: 7 PFHLVTLI-LLTALIQGGSAQC-PWEDESES-ELQSTCICSYNTAN--ELSIQCNDLTNY 61
P +TL+ L+ +I +AQ + ES +L S I T++ + ++ +L+N
Sbjct: 118 PTSNITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQLKYLNLSNN 177
Query: 62 PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRH 121
+ N L ++ +N + + I F ++ L+L RI + F+
Sbjct: 178 RITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQG 237
Query: 122 LDAIRNIN----------ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQE 170
LD++R++ + F G+ ++ L+L H + + L L+ L + +
Sbjct: 238 LDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRM-LQQLYVSQ 296
Query: 171 NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR 229
N +E++ + + L+ +DLS N++ ++ + +F L+ L L L DN +T + FR
Sbjct: 297 NAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFR 356
Query: 230 GLELNNNLTLYKN 242
L L L N
Sbjct: 357 FLSNLQTLDLRNN 369
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 65/244 (26%), Positives = 115/244 (47%)
Query: 11 VTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDL--TNYP--LFKA 66
+ L+ + L S +CP E T +Y A ++ CNDL T P L
Sbjct: 17 ILLLAVLGLSSVHSTECPQLCVCEIRPWFTPQSTYREAT--TVDCNDLHLTRIPGNLSAD 74
Query: 67 T----LNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL 122
T L + + +L + N ++++N F+ I +++ L++ ++ +T HL
Sbjct: 75 TQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNI--RDIGLTN--MSQLTT---LHL 127
Query: 123 DAIRNINENTFNGIFIKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
+ + + F+ + NLQ ++H +I+SI PNAF L L+ L+L N L+ +
Sbjct: 128 EENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLR-LHLNSNRLKAIDSR 186
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLT 238
NL ++ + +N + I D +F L NL +L L+ LT + N+F GL+ +L+
Sbjct: 187 WFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLDNLESLS 246
Query: 239 LYKN 242
Y N
Sbjct: 247 FYDN 250
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 59/200 (29%), Positives = 93/200 (46%)
Query: 35 SELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINEN 94
S ++ + + + L ++ N + P F +L N L LYIN++ I +I N
Sbjct: 109 SNIRDIGLTNMSQLTTLHLEENQIVEMPDF--SLQDLTN----LQELYINHNQISSIAPN 162
Query: 95 TFNGIF-IKNLQLSHCRINSITPNAFRHLD--AIRNINENTFNGIF---------IKNLQ 142
F G+ + L L+ R+ +I F I I EN GI +++L
Sbjct: 163 AFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLV 222
Query: 143 LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD 202
L+ + I NAF L+ L+ L+ +N L +VP L+ L NL +DL+KN I KI +
Sbjct: 223 LAGMELTDIPGNAFVGLD-NLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQE 281
Query: 203 DSFSTLNNLVTLK-LSDNNL 221
F N++ LK L NN+
Sbjct: 282 GDFK---NMLRLKELGINNM 298
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/117 (35%), Positives = 63/117 (53%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
IR +N + ++ L LS I + P AF +L L+ L L+ N L+ +P
Sbjct: 66 IRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLP-RLRVLRLRGNQLKLIPPGVFTR 124
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNSFRGLELNNNLTL 239
L NLTL+DLS+NK+ + D +F L++L L++ DN+L + +F GL LTL
Sbjct: 125 LDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTL 181
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 45/186 (24%), Positives = 87/186 (46%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLD----------AIRNIN 129
L + ++ + ++ F G+ ++ L L C + +++ + HL AI ++
Sbjct: 155 LEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLE 214
Query: 130 ENTFNGI-FIKNLQLSHCRI-NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
+ F + + +L++ + + + + R L T L++ ++ VP LRH +L
Sbjct: 215 DQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLNLT--SLSVTHTNITAVPAAALRHQAHL 272
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLE------LNNNL--T 238
T ++LS N I +P SF L L L L+ L + + +F GL L+NNL T
Sbjct: 273 TCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLST 332
Query: 239 LYKNSF 244
L +++F
Sbjct: 333 LEESTF 338
>UNIPROTKB|Q8WXD0 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007189
"adenylate cyclase-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007193 "adenylate cyclase-inhibiting
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0017046 "peptide hormone binding" evidence=IEA] [GO:0030819
"positive regulation of cAMP biosynthetic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0043066 GO:GO:0008285
EMBL:CH471075 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0007193 GO:GO:0030819 GO:GO:0008584
GO:GO:0017046 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0001556
GO:GO:0016500 MIM:219050 HOVERGEN:HBG026354 HOGENOM:HOG000049056
CTD:122042 KO:K04307 OrthoDB:EOG47M1XF EMBL:AF403384 EMBL:AF453828
EMBL:AY899851 EMBL:AL138708 EMBL:AL159161 IPI:IPI00103510
IPI:IPI00654597 RefSeq:NP_001159530.1 RefSeq:NP_570718.1
UniGene:Hs.680763 ProteinModelPortal:Q8WXD0 SMR:Q8WXD0
STRING:Q8WXD0 PhosphoSite:Q8WXD0 DMDM:21362625 PaxDb:Q8WXD0
PRIDE:Q8WXD0 DNASU:122042 Ensembl:ENST00000298386
Ensembl:ENST00000380314 GeneID:122042 KEGG:hsa:122042
UCSC:uc001utt.3 GeneCards:GC13P032313 HGNC:HGNC:17318 MIM:606655
neXtProt:NX_Q8WXD0 PharmGKB:PA134918556 InParanoid:Q8WXD0
OMA:KILCCAD PhylomeDB:Q8WXD0 ChEMBL:CHEMBL1628482 GenomeRNAi:122042
NextBio:80847 ArrayExpress:Q8WXD0 Bgee:Q8WXD0 CleanEx:HS_RXFP2
Genevestigator:Q8WXD0 GermOnline:ENSG00000133105 Uniprot:Q8WXD0
Length = 754
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 58/220 (26%), Positives = 111/220 (50%)
Query: 36 ELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENT 95
+L+S + S N LS++ N + + P K + K+ TK L +++ ++ IR+I+
Sbjct: 128 DLKSVPMIS-NNVTLLSLKKNKIHSLP-DKVFI-KY--TK--LKKIFLQHNCIRHISRKA 180
Query: 96 FNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIRNINENTFNGI-FIKNLQL 143
F G+ ++ L L+H I ++ P F+ L + I I++ F G+ + L +
Sbjct: 181 FFGLCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPITRISQRLFTGLNSLFFLSM 240
Query: 144 SHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDD 203
+ + ++ + L ++L+ N ++ + T +LT++ L +N+IG +P+
Sbjct: 241 VNNYLEALPKQMCAQMP-QLNWVDLEGNRIKYLTNSTFLSCDSLTVLFLPRNQIGFVPEK 299
Query: 204 SFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+FS+L NL L LS N +T L + F+ L+L L L N
Sbjct: 300 TFSSLKNLGELDLSSNTITELSPHLFKDLKLLQKLNLSSN 339
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 51/175 (29%), Positives = 79/175 (45%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINE-NTFNG 135
L +LY+N++ I + F + + L L I I+ F L+++ ++ N +
Sbjct: 187 LQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPITRISQRLFTGLNSLFFLSMVNNYLE 246
Query: 136 IFIKNL-----QLSHC-----RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
K + QL+ RI +T + F + +L L L N + VP +T LK
Sbjct: 247 ALPKQMCAQMPQLNWVDLEGNRIKYLTNSTFLSCD-SLTVLFLPRNQIGFVPEKTFSSLK 305
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
NL +DLS N I ++ F L L L LS N L L+KN F L+ +L L
Sbjct: 306 NLGELDLSSNTITELSPHLFKDLKLLQKLNLSSNPLMYLHKNQFESLKQLQSLDL 360
>MGI|MGI:2442512 [details] [associations]
symbol:Lrfn3 "leucine rich repeat and fibronectin type III
domain containing 3" species:10090 "Mus musculus" [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:2442512 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211 GO:GO:0030424
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 EMBL:CH466593 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:79414 KO:K16356
OMA:WAVGEEE eggNOG:NOG239228 EMBL:DQ078787 EMBL:AK040916
EMBL:BC066999 EMBL:BC094593 IPI:IPI00222949 RefSeq:NP_780687.1
UniGene:Mm.23157 ProteinModelPortal:Q8BLY3 SMR:Q8BLY3 STRING:Q8BLY3
PhosphoSite:Q8BLY3 PaxDb:Q8BLY3 PRIDE:Q8BLY3
Ensembl:ENSMUST00000046351 GeneID:233067 KEGG:mmu:233067
UCSC:uc009gee.1 InParanoid:Q505E2 OrthoDB:EOG43TZV6 NextBio:381527
Bgee:Q8BLY3 Genevestigator:Q8BLY3 GermOnline:ENSMUSG00000036957
Uniprot:Q8BLY3
Length = 626
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 58/224 (25%), Positives = 98/224 (43%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN 69
+ L LL L+ A P + S C C + LS+ C +L+
Sbjct: 1 MAVLPLLLCLLPLAPASSPPQPAISSPCPRRCRCQTQSM-PLSVLCPG-AGLLFVPPSLD 58
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------H 121
+ ++ L +I +A+R + G+ +L LS I + AF H
Sbjct: 59 RRA-AELRLADNFI--AAVRRRDLANMTGLL--HLSLSRNTIRHVAAGAFADLRALRALH 113
Query: 122 LDAIR--NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
LD R ++ E G+ +++L LS+ ++ ++ A TL+ L+L N+LEQ+P
Sbjct: 114 LDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPW 173
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
E L L N+ + L N + +P +FS L+ L L ++ N LT
Sbjct: 174 EALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLT 217
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/87 (34%), Positives = 55/87 (63%)
Query: 133 FNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDL 192
FNG+ + + + + + S +P A+RH+E T++H+ + N+L+ VPV +L L ++L
Sbjct: 78 FNGL--RTIAILNSTLQSFSPTAWRHVEATIEHITINGNELKTVPV--FGNLSTLMSMNL 133
Query: 193 SKNKIGKIPDDSFSTLNNLVTLKLSDN 219
+ N+I IPD +F+ L+ L L+L +N
Sbjct: 134 NSNQISSIPDKAFNGLSALTQLRLENN 160
>ZFIN|ZDB-GENE-040808-36 [details] [associations]
symbol:lrrc33 "leucine rich repeat containing 33"
species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040808-36
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 HOGENOM:HOG000113368
CTD:375387 HOVERGEN:HBG081928 OrthoDB:EOG4DBTDK EMBL:BC079491
IPI:IPI00508822 RefSeq:NP_001003775.1 UniGene:Dr.151249
ProteinModelPortal:Q6AXL3 PRIDE:Q6AXL3 GeneID:445318
KEGG:dre:445318 eggNOG:NOG332005 InParanoid:Q6AXL3 OMA:GRSELEC
NextBio:20832061 ArrayExpress:Q6AXL3 Uniprot:Q6AXL3
Length = 685
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 60/214 (28%), Positives = 98/214 (45%)
Query: 33 SESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNIN 92
+E + T N L++ NDL N+P T ++NT LDL +
Sbjct: 388 TEIKASQTSKNKLNNLTHLNLSTNDLQNFPPMIFTSLPNLNT---LDL-----------S 433
Query: 93 ENTFNGIFIKN-LQLSHC-RINSITPNAFRHL-D-AIRNINENTFNGIFIKNLQLSHCRI 148
NT + + N + LS C +S+ +L D +I+N+ + F G + +L+LS+
Sbjct: 434 HNTVDVCYSSNYMGLSGCVEWSSMASLKQLYLADCSIQNVPSSAFKGTSLTHLELSNNPN 493
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+ + + L TL+HL + L+ +LK+L ++S+N + K+PD S L
Sbjct: 494 LHLKQQSLKGLANTLQHLGIGNTGLQDFDFSPYTNLKSL---NISRNSLSKLPD-SLMAL 549
Query: 209 NNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242
N L L L DN+LT K+ L T+Y N
Sbjct: 550 N-LKLLDLRDNSLTTIKSEHASLLAKKLQTVYMN 582
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 59/212 (27%), Positives = 97/212 (45%)
Query: 46 NTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNL 104
N NE+ + DL N L K N L+ L +++++I N++ N F G+ +K L
Sbjct: 176 NLPNEVVVL--DLGNNNLTKLEANSFFMAP-NLEELTLSDNSIINMDPNAFYGLAKLKRL 232
Query: 105 QLSHCRINSITPNAFRHLDAIRNINEN-----TFNGIFIKNLQ-LSHCRINS-----ITP 153
L +C + S+ P +F+ L + ++ N + +G + +LQ L R+ I
Sbjct: 233 SLQNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPT 292
Query: 154 NAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
NA L TL+ LNL N L + E + NL ++ L +N+I KI + L L
Sbjct: 293 NALAGLR-TLEALNLGSNLLTIINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTALKV 351
Query: 214 LKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
L+L DN ++ L L++ N R
Sbjct: 352 LELDDNLISSLPEGLSKLSQLQELSITSNRLR 383
>MGI|MGI:2444277 [details] [associations]
symbol:Islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2444277 GO:GO:0016021 GO:GO:0005886
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 HSSP:Q9BZR6 CTD:57611
eggNOG:NOG240332 HOGENOM:HOG000113108 HOVERGEN:HBG100863
OrthoDB:EOG4QC14W EMBL:EU497918 EMBL:AK129367 EMBL:BC059068
EMBL:BC096531 IPI:IPI00420535 RefSeq:NP_001155007.1
RefSeq:NP_001155008.1 RefSeq:NP_001155009.1 RefSeq:NP_001155010.1
RefSeq:NP_001155011.1 RefSeq:NP_001155012.1 RefSeq:NP_001155013.1
RefSeq:NP_796167.2 UniGene:Mm.186499 ProteinModelPortal:Q5RKR3
SMR:Q5RKR3 STRING:Q5RKR3 PhosphoSite:Q5RKR3 PaxDb:Q5RKR3
PRIDE:Q5RKR3 Ensembl:ENSMUST00000114144 Ensembl:ENSMUST00000163897
Ensembl:ENSMUST00000165276 Ensembl:ENSMUST00000170421 GeneID:320563
KEGG:mmu:320563 UCSC:uc009pwl.1 GeneTree:ENSGT00700000104028
InParanoid:Q5RKR3 NextBio:396975 Bgee:Q5RKR3 Genevestigator:Q5RKR3
Uniprot:Q5RKR3
Length = 745
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 34/108 (31%), Positives = 60/108 (55%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ +L L+H + ++ A L LK+L+L N + P LR+L L L+ ++ N++
Sbjct: 77 VTSLWLAHSEVRTVESGALAVLS-QLKNLDLSHNLISNFPWSDLRNLSALQLLKMNHNRL 135
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
G +P D+ L +L +L++++N L TL +F L ++L LY N F
Sbjct: 136 GSLPRDALGALPDLRSLRINNNRLRTLEPGTFDALSALSHLQLYHNPF 183
>UNIPROTKB|F1NY48 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0030154 GO:GO:0004930 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007188
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 OMA:YTLTTRP
GeneTree:ENSGT00650000093266 EMBL:AADN02016502 IPI:IPI00603372
ProteinModelPortal:F1NY48 Ensembl:ENSGALT00000015353 Uniprot:F1NY48
Length = 755
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 54/207 (26%), Positives = 101/207 (48%)
Query: 43 CSYNTANELSIQCNDLTNYPLFKATLNK---HVNTKVP-LDLLYINNSAIRNINENTFNG 98
C ++ + +++T L K L K V K L LY+ ++ IR ++++ F G
Sbjct: 110 CDAAKLRDVPLVPSNITTMSLQKNLLRKLYADVFRKYQDLKNLYLQDNKIRAVSKHAFKG 169
Query: 99 IF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR 157
++ + L LS+ +I ++ P F L + + I+N RIN I+P+ F
Sbjct: 170 LYNLTKLYLSNNKITNLKPRVFEDLHKLE--------WLIIENN-----RINRISPSTFY 216
Query: 158 HLEFTLKHLNLQENDLEQVPVETL-RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216
L+ +L L++ N L +P + L +++ L +DL N I + + +F + + L L +
Sbjct: 217 GLK-SLILLDMMNNSLAHLPDKPLCQYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVM 275
Query: 217 SDNNLT-LYKNSFRGLELNNNLTLYKN 242
N ++ L +NSF L++ + L L N
Sbjct: 276 RQNKISSLNENSFSSLQMLDELDLASN 302
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 59/219 (26%), Positives = 100/219 (45%)
Query: 45 YNTANELSIQCNDLTNY-PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF--- 100
YN +L + N +TN P L+K L+ L I N+ I I+ +TF G+
Sbjct: 171 YNLT-KLYLSNNKITNLKPRVFEDLHK-------LEWLIIENNRINRISPSTFYGLKSLI 222
Query: 101 ---IKNLQLSH------C----RINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCR 147
+ N L+H C R+N + H+ +RN+ + + + + L + +
Sbjct: 223 LLDMMNNSLAHLPDKPLCQYMPRLNWLDLEG-NHIHHLRNVTFISCSTLTV--LVMRQNK 279
Query: 148 INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
I+S+ N+F L+ L L+L N++E +P + LK L+ ++LS N I KI D F
Sbjct: 280 ISSLNENSFSSLQM-LDELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFDF 338
Query: 208 LNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
L L +L L + + + F + L N +Y F+
Sbjct: 339 LTKLKSLSLEGIEIANIQRRMF--IPLRNLSHIYFKKFQ 375
>UNIPROTKB|Q9BTN0 [details] [associations]
symbol:LRFN3 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 3" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0042734 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000237343 HOVERGEN:HBG052352 CTD:79414
KO:K16356 OMA:WAVGEEE OrthoDB:EOG4H465G EMBL:AK172754 EMBL:AY358127
EMBL:BC003578 IPI:IPI00001577 RefSeq:NP_078785.1 UniGene:Hs.143792
ProteinModelPortal:Q9BTN0 SMR:Q9BTN0 STRING:Q9BTN0
PhosphoSite:Q9BTN0 DMDM:62286945 PRIDE:Q9BTN0 DNASU:79414
Ensembl:ENST00000246529 GeneID:79414 KEGG:hsa:79414 UCSC:uc002oco.3
GeneCards:GC19P036427 HGNC:HGNC:28370 HPA:HPA048923 MIM:612809
neXtProt:NX_Q9BTN0 PharmGKB:PA134880779 eggNOG:NOG239228
InParanoid:Q9BTN0 PhylomeDB:Q9BTN0 ChiTaRS:LRFN3 GenomeRNAi:79414
NextBio:68379 Bgee:Q9BTN0 CleanEx:HS_LRFN3 Genevestigator:Q9BTN0
GermOnline:ENSG00000126243 Uniprot:Q9BTN0
Length = 628
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 10 LVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLN 69
+ L LL L+ A P + + S C C + LS+ C +L+
Sbjct: 1 MAILPLLLCLLPLAPASSPPQSATPSPCPRRCRCQTQSL-PLSVLCPG-AGLLFVPPSLD 58
Query: 70 KHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------H 121
+ ++ L +I +++R + G+ +L LS I + AF H
Sbjct: 59 RRA-AELRLADNFI--ASVRRRDLANMTGLL--HLSLSRNTIRHVAAGAFADLRALRALH 113
Query: 122 LDAIR--NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPV 178
LD R ++ E G+ +++L LS+ ++ ++ A TL+ L+L N+LEQ+P
Sbjct: 114 LDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNNLEQLPW 173
Query: 179 ETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
E L L N+ + L N + +P +FS L+ L L ++ N LT
Sbjct: 174 EALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLT 217
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 80 LLYINNSAIRNINENTFN-GIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFI 138
LL ++ S + ++E N +F L LS I+ + PN L ++R F+
Sbjct: 47 LLRVDCSDL-GLSELPSNLSVFTSYLDLSMNNISQLLPNP---LPSLR----------FL 92
Query: 139 KNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIG 198
+ L+L+ + I AF L ++LK L LQ N L VP E L++L++L + L N+I
Sbjct: 93 EELRLAGNALTYIPKGAFTGL-YSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIH 151
Query: 199 KIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+ F L++L TL L+ NNL + + R L L + N+ R
Sbjct: 152 SLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIR 198
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 50/197 (25%), Positives = 96/197 (48%)
Query: 40 TCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI 99
T I + + EL N++ + P KA + N L ++ ++ I+ + + F +
Sbjct: 179 TAIRTLSNLKELGFHSNNIRSIPE-KAFVG---NPS--LITIHFYDNPIQFVGRSAFQHL 232
Query: 100 -FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL------QLSHCRINSIT 152
++ L L+ + IT F L N+ T G I +L QL + ++ ++
Sbjct: 233 PELRTLTLNGA--SQITE--FPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLS 288
Query: 153 PNAFRHL-EFT----LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
N L F+ L+ ++L+ N++ ++ V+T + L +L ++L+ NKI I ++FST
Sbjct: 289 YNLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFST 348
Query: 208 LNNLVTLKLSDNNLTLY 224
L +L+ L LS N L+ +
Sbjct: 349 LPSLIKLDLSSNLLSSF 365
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 59/218 (27%), Positives = 101/218 (46%)
Query: 37 LQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTF 96
L C ++ L + N+L +P TL+ N K +L + +N+ IR+I E F
Sbjct: 153 LGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLS---NLK---ELGFHSNN-IRSIPEKAF 205
Query: 97 NGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI--F--------IKNLQLSH 145
G + + I + +AF+HL +R + N + I F +++L L+
Sbjct: 206 VGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTLTG 265
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
+I+S+ L L+ L+L N LE +P ++ + L IDL N+I +I D+F
Sbjct: 266 AQISSLPQTVCNQLP-NLQVLDLSYNLLEDLPSFSV--CQKLQKIDLRHNEIYEIKVDTF 322
Query: 206 STLNNLVTLKLSDNNLTL-YKNSFRGLELNNNLTLYKN 242
L +L +L L+ N + + + N+F L L L N
Sbjct: 323 QQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN 360
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 150 (57.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 125 IRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I +I+ + + ++ L LS ++++I N+F L HL L N++ V +
Sbjct: 349 ITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSN-NLVHLILSFNEITNVNEHSFAT 407
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
L NLT ++LS N++ +P F LN L L L+ N L + ++FRGLE NL L N
Sbjct: 408 LNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLKSNK 467
Query: 244 FR 245
R
Sbjct: 468 IR 469
Score = 146 (56.5 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 60/229 (26%), Positives = 112/229 (48%)
Query: 31 DESESELQSTCICSYNTANELS---IQCNDLTNYPLFK-ATLNKHVNTKVPLDLLYINNS 86
D S ++L + + S+ +N L + N++TN ATLN L L ++N+
Sbjct: 367 DLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNN-------LTDLELSNN 419
Query: 87 AIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTF----NGIF-- 137
+ + F + +K L L+ ++ I + FR L++++N+ N +G+F
Sbjct: 420 RLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYV 478
Query: 138 ---IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSK 194
I+ + L+ +I+S++ +L L+HLNL N + ++ V+T ++L ++DLS
Sbjct: 479 MHKIETIDLAMNQISSLSRQGLFNLT-KLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSN 537
Query: 195 NKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
N I + L+ L TL L+ N L L +N+F ++ L L +N
Sbjct: 538 NAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRN 586
Score = 137 (53.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 56/219 (25%), Positives = 110/219 (50%)
Query: 46 NTANELSI-QCNDLTNYPLFKATLNKHVNTKVP-------LDLLYINNSAIRNINENTFN 97
N N+ ++ + +L N L K +L +++ +P L L + N+ I +I+ +
Sbjct: 301 NKLNDTTVLEIRNLLN--LTKVSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLA 358
Query: 98 GI-FIKNLQLSHCRINSITPNAFR------HL----DAIRNINENTFNGIF-IKNLQLSH 145
+ ++ L LS ++++I N+F HL + I N+NE++F + + +L+LS+
Sbjct: 359 ALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSN 418
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
R++++ F++L LK L L N LE + T R L+++ + L NKI + D F
Sbjct: 419 NRLSTLPIRVFKNLN-QLKKLALNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVF 476
Query: 206 STLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
++ + T+ L+ N ++ L + L +L L N+
Sbjct: 477 YVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNA 515
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 31 DESESELQSTCICSYNTANELS 52
+ + SE +S C+Y+T N+ +
Sbjct: 62 NNAASESRSNDNCNYSTTNDFN 83
>UNIPROTKB|Q99645 [details] [associations]
symbol:EPYC "Epiphycan" species:9606 "Homo sapiens"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005539 "glycosaminoglycan binding" evidence=TAS] [GO:0007565
"female pregnancy" evidence=TAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 GO:GO:0007565 EMBL:CH471054 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005539 CTD:1833
HOGENOM:HOG000273909 HOVERGEN:HBG006850 KO:K08127 OMA:CDDHELD
OrthoDB:EOG4RV2S6 InterPro:IPR027217 PANTHER:PTHR24371:SF4
eggNOG:NOG314832 EMBL:U59111 EMBL:AK290642 EMBL:BC030958
IPI:IPI00007444 RefSeq:NP_004941.2 UniGene:Hs.435680
ProteinModelPortal:Q99645 SMR:Q99645 STRING:Q99645
PhosphoSite:Q99645 DMDM:143811386 PaxDb:Q99645 PRIDE:Q99645
DNASU:1833 Ensembl:ENST00000261172 GeneID:1833 KEGG:hsa:1833
UCSC:uc001tbk.3 GeneCards:GC12M091357 HGNC:HGNC:3053 HPA:HPA038212
MIM:601657 neXtProt:NX_Q99645 PharmGKB:PA162385144
InParanoid:Q99645 PhylomeDB:Q99645 BindingDB:Q99645
ChEMBL:CHEMBL2080 GenomeRNAi:1833 NextBio:7487 ArrayExpress:Q99645
Bgee:Q99645 CleanEx:HS_EPYC Genevestigator:Q99645
GermOnline:ENSG00000083782 Uniprot:Q99645
Length = 322
Score = 140 (54.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 59/196 (30%), Positives = 93/196 (47%)
Query: 62 PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI--FIKNLQLSHCRINSITPNAF 119
P F L H N P LL S +++ + I KN + R N I
Sbjct: 101 PEFTGVLGPHTNEDFPTCLLCTCISTTVYCDDHELDAIPPLPKNTAYFYSRFNRI----- 155
Query: 120 RHLDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP- 177
+ IN+N F + +K + L+ I+ I +AFR L L+ L L++N + Q+P
Sbjct: 156 ------KKINKNDFASLSDLKRIDLTSNLISEIDEDAFRKLP-QLRELVLRDNKIRQLPE 208
Query: 178 VETLRHLKNLTLIDLSKNKIGK--IPDDSFSTLNNLVTLKLSDNNLT-----LYKNSFRG 230
+ T LT ID+S N++G+ I ++F + +L L L+DNNL L +N R
Sbjct: 209 LPT-----TLTFIDISNNRLGRKGIKQEAFKDMYDLHHLYLTDNNLDHIPLPLPEN-LRA 262
Query: 231 LELNNN--LTLYKNSF 244
L L NN L +++++F
Sbjct: 263 LHLQNNNILEMHEDTF 278
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 39/155 (25%), Positives = 77/155 (49%)
Query: 82 YINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI-- 136
Y + I+ IN+N F + +K + L+ I+ I +AFR L +R + +N +
Sbjct: 149 YSRFNRIKKINKNDFASLSDLKRIDLTSNLISEIDEDAFRKLPQLRELVLRDNKIRQLPE 208
Query: 137 ---FIKNLQLSHCRIN--SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLID 191
+ + +S+ R+ I AF+ + + L HL L +N+L+ +P+ +NL +
Sbjct: 209 LPTTLTFIDISNNRLGRKGIKQEAFKDM-YDLHHLYLTDNNLDHIPLPLP---ENLRALH 264
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN 226
L N I ++ +D+F + NL ++ + ++ L N
Sbjct: 265 LQNNNILEMHEDTFCNVKNLTYIRKALEDIRLDGN 299
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 48/156 (30%), Positives = 78/156 (50%)
Query: 81 LYINNSAIRNINENTFNGIFIKNLQLSHCRINSITP---NAF---RHLDAIRNINENTFN 134
L ++ + I I + F+G+ KNL++ H N I+ AF + L+ IR +N N
Sbjct: 57 LDLDRNNITRITKVDFSGL--KNLRVLHLENNQISVIERGAFEGLKQLERIR-LNRNRLQ 113
Query: 135 GI----F-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ F + L LS +I ++ AFR + T+K+L L N + + R L+
Sbjct: 114 VLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGIT-TVKNLQLDSNHISCIEDGAFRALR 172
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+L ++ L+ N I IP SF+ + L TL+L NNL
Sbjct: 173 DLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNL 208
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 45/141 (31%), Positives = 74/141 (52%)
Query: 114 ITPNAFRHLDAIRN----INENTFNGIFIKNLQLSHCRINSITP---NAFRHLEFTLKHL 166
I NA R LD RN I + F+G+ KNL++ H N I+ AF L+ L+ +
Sbjct: 50 IPRNAER-LDLDRNNITRITKVDFSGL--KNLRVLHLENNQISVIERGAFEGLK-QLERI 105
Query: 167 NLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKN 226
L N L+ +P + L+ +DLS+N+I +P +F + + L+L N+++ ++
Sbjct: 106 RLNRNRLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIED 165
Query: 227 -SFRGL---EL----NNNLTL 239
+FR L E+ NNN+TL
Sbjct: 166 GAFRALRDLEILTLNNNNITL 186
Score = 112 (44.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L+ N L VP E L +LK LTL+DLS N I + +FS + L TL LS N +
Sbjct: 750 LYLEGNLLTSVPKE-LPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVP 808
Query: 226 -NSFRGLELNNNLTLYKN 242
++F GL LTL+ N
Sbjct: 809 VHAFDGLRSLRLLTLHGN 826
Score = 108 (43.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
+R+I E F+G + L L+ ++ S++ F+ L LK L L+ N + V T
Sbjct: 561 LRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGL-IGLKTLMLRSNQISCVDNATFTG 619
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L ++ L+ L N+I I +F+TL++L T+ L N
Sbjct: 620 LSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 85 (35.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 40/150 (26%), Positives = 73/150 (48%)
Query: 35 SELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINE 93
S L+ T I + + ++ ND + +AT K+P L + ++N+ +R+I E
Sbjct: 511 SNLKLTKIPPHLPEHTTDLRLND-NEISILEAT---GAFKKLPNLRKINLSNNKLRDIRE 566
Query: 94 NTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI----NE-----N-TFNGIF-IKNL 141
F+G + L L+ ++ S++ F+ L ++ + N+ N TF G+ ++ L
Sbjct: 567 GAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLL 626
Query: 142 QLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
L RI++I P AF L +L +NL N
Sbjct: 627 SLYDNRISTIAPGAFNTLH-SLSTINLLSN 655
Score = 58 (25.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 76 VPLDLLYINNSAIRNINENTFNGIFIKNL-QLSHCRINSITPNAFRHLDAIRNIN--ENT 132
V L LL +N + I + NTF + NL L ++ +I+ F L AI+ ++ +N
Sbjct: 371 VSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQNP 430
Query: 133 F 133
F
Sbjct: 431 F 431
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 54/159 (33%), Positives = 78/159 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN-----INENT 132
L LYIN++ I I+ N F+G+ KNL H N + R D+ N I EN
Sbjct: 145 LQELYINHNQISTISANAFSGL--KNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202
Query: 133 FNGIFIKNLQ-LSHCR--------INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
GI N + LS+ R + I NA L+ +L+ L+ +N L +VP L+
Sbjct: 203 VIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLD-SLESLSFYDNKLVKVPQLALQK 261
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK-LSDNNL 221
+ NL +DL+KN I KI + F N++ LK L NN+
Sbjct: 262 VPNLKFLDLNKNPIHKIQEGDFK---NMLRLKELGINNM 297
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 65/255 (25%), Positives = 121/255 (47%)
Query: 1 MTSHFSPFHLVTLILLTALIQGG--SAQCPWEDESESELQSTCICSYNTANELSIQCNDL 58
M+ + + +V +L+T+L S++CP E T +Y A ++ CNDL
Sbjct: 4 MSFVLAAYQMVLSLLMTSLTGSSLQSSECPQLCVCEIRPWFTPQSTYREAT--TVDCNDL 61
Query: 59 TNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINE--NTFNGI---FIKN--LQLSHCRI 111
L + N +T+V LL +N+ + ++E FN F +N + +
Sbjct: 62 R---LTRIPSNLSSDTQV---LLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGL 115
Query: 112 NSITPNAFRHLDA--IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNL 168
++T HL+ I +N+ + ++ L ++H +I++I+ NAF L+ L+ L+L
Sbjct: 116 ANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLR-LHL 174
Query: 169 QENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNS 227
N L+ + NL ++ + +N + I D +F L+NL +L L+ LT + N+
Sbjct: 175 NSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNA 234
Query: 228 FRGLELNNNLTLYKN 242
GL+ +L+ Y N
Sbjct: 235 LVGLDSLESLSFYDN 249
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 54/159 (33%), Positives = 79/159 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN-----INENT 132
L LYIN++ I +I+ N F+G+ KNL H N + R D+ N I EN
Sbjct: 145 LQELYINHNQISSISANAFSGL--KNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202
Query: 133 FNGIFIKNLQ-LSHCR--------INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
GI N + LS+ R + I NA L+ +L+ L+ +N L +VP L+
Sbjct: 203 VIGILDMNFRPLSNLRSLVLAGMYLTDIPGNALVGLD-SLESLSFYDNKLIKVPQLALQK 261
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK-LSDNNL 221
+ NL +DL+KN I KI + F N++ LK L NN+
Sbjct: 262 VPNLKFLDLNKNPIHKIQEGDFK---NMLRLKELGINNM 297
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 66/247 (26%), Positives = 118/247 (47%)
Query: 10 LVTLILLTALIQGG--SAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKAT 67
+V +L+ +L + +++CP E T +Y A ++ CNDL L +
Sbjct: 13 MVLGLLIPSLTESSILNSECPQLCVCEIRPWFTPQSTYREAT--TVDCNDLR---LTRIP 67
Query: 68 LNKHVNTKVPLDLLYINNSAIRNINE--NTFNGI---FIKN--LQLSHCRINSITPNAFR 120
N +T+V LL +N+ + ++E FN F +N + + ++T
Sbjct: 68 GNLSSDTQV---LLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTL 124
Query: 121 HLDAIRNINENTFNGIF-IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQV 176
HL+ I+E T + + NLQ ++H +I+SI+ NAF L+ L+ L+L N L+ +
Sbjct: 125 HLEE-NQISEMTDYCLQDLSNLQELYINHNQISSISANAFSGLKNLLR-LHLNSNKLKVI 182
Query: 177 PVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNN 235
NL ++ + +N + I D +F L+NL +L L+ LT + N+ GL+
Sbjct: 183 DSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDIPGNALVGLDSLE 242
Query: 236 NLTLYKN 242
+L+ Y N
Sbjct: 243 SLSFYDN 249
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIR 126
L+ L + ++ IR + E TF G+ ++ L L+ +I+ + AF L + +R
Sbjct: 316 LEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLR 375
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++ E+ F G+ + +L L H + I + F L L+ L L++N + + ++L L
Sbjct: 376 SLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLS-GLRRLFLRDNSISSIEEQSLAGLS 434
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRG 230
L +DL+ N++ +P F L L L LS+N LT+ G
Sbjct: 435 ELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLG 479
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ L LS + S+ N F HL L+ L L N + V +K L +DLS N++
Sbjct: 220 LRELDLSRNALRSVKANVFIHLP-RLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRV 278
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
+ +D+F L L L+L+ N +T L +F+ L L L N R
Sbjct: 279 AGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIR 327
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 80 LLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI 136
++ ++ + +R++ E+ F G+ + +L L H + I + F L +R + +N+ + I
Sbjct: 366 VMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSI 425
Query: 137 FIKNLQ-LSHCRINSITPNAFRHLE---FT----LKHLNLQENDLEQVPVETLRHLKNLT 188
++L LS +T N HL F L++L L N L + + L L+
Sbjct: 426 EEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAF 485
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY 224
+DLS N++ + FS+L L L L +N+L +
Sbjct: 486 WLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTF 521
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN+I +I +F+ L NL TL+L DN LTL
Sbjct: 72 RYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTL 131
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 132 VPSQAFEYLSKLRELWLRNN 151
>UNIPROTKB|F1S6B5 [details] [associations]
symbol:FMOD "Fibromodulin" species:9823 "Sus scrofa"
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0031012 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00600000084286 OMA:AQYDEDP
PANTHER:PTHR24371:SF11 EMBL:CU657939 Ensembl:ENSSSCT00000016639
ArrayExpress:F1S6B5 Uniprot:F1S6B5
Length = 379
Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 53/194 (27%), Positives = 93/194 (47%)
Query: 54 QCNDLTNYPLFKATLNKHVNTK--VP--LDLLYINNSAIRNINENTFNG------IFIKN 103
+C+ N+P N+++ VP + +Y N+ I +I E F+ I +
Sbjct: 82 ECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISSIQEGVFDNATGLLWIALHG 141
Query: 104 LQLSHCRINSITPNAFRHLDAIRNINENTFNGI------FIKNLQLSHCRINSITPNAFR 157
Q++ ++ + RHL+ + ++ N + ++ L L H +I+ + NA
Sbjct: 142 NQITSDKVGKKVFSKLRHLERLY-LDHNNLTRMPGPLPRSLRELHLDHNQISRVPNNALE 200
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
LE L L LQ N++++V ++R L++L L+DLS N + K+PD S L L L
Sbjct: 201 GLE-NLTALYLQHNEIQEVG-SSMRGLRSLILLDLSYNHLRKVPDGLPSALEQLY---LE 255
Query: 218 DNNLTLYKNS-FRG 230
NN+ +S FRG
Sbjct: 256 HNNVYSVPDSYFRG 269
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 120 (47.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ + LS+ +I+ P+AF+ L +L L L N + ++P L +L L+ L+ NKI
Sbjct: 219 LRRIDLSNNQISEAAPDAFQGLR-SLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKI 277
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYK 241
+ D+F L+NL L L DN L T+ K +F L TLY+
Sbjct: 278 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ--TLYE 320
Score = 118 (46.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LY 224
L L N VP E L + K+LTLIDLS N+I + + SFS + L+TL LS N L +
Sbjct: 655 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 713
Query: 225 KNSFRGLELNNNLTLYKN 242
+F GL+ L+L+ N
Sbjct: 714 ARTFDGLKSLRLLSLHGN 731
Score = 106 (42.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
CR +T +L T+ + L++N ++ +P K L IDLS N+I + D+F
Sbjct: 179 CRGKGLTEIP-TNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAF 237
Query: 206 STLNNLVTLKLSDNNLT-LYKNSFRGL 231
L +L +L L N +T L K F GL
Sbjct: 238 QGLRSLNSLVLYGNKITELPKGLFEGL 264
Score = 96 (38.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ LS+ RI++++ +F ++ L L L N L +P T LK+L L+ L N I +
Sbjct: 678 IDLSNNRISTLSNQSFSNMTQLLT-LILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVV 736
Query: 201 PDDSFSTLNNLVTLKLSDNNL 221
P+ +F+ L+ L L + N L
Sbjct: 737 PEGAFNDLSALSHLAIGANPL 757
Score = 77 (32.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/110 (24%), Positives = 55/110 (50%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I +I E F+G + L L+ R+ ++ F+ L++++
Sbjct: 452 KLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRS 511
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ ++F G+ ++ L L +I ++ P +F L +L LNL N
Sbjct: 512 NRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLH-SLSTLNLLAN 560
Score = 70 (29.7 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 83 INNSAIRNINENTFNG-IFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL 141
++ + I+ I F G + IKNLQL + +I+ I AFR A+R++ T N I L
Sbjct: 26 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR---ALRDLEVLTLNNNNITRL 82
Query: 142 QLS 144
++
Sbjct: 83 SVA 85
>MGI|MGI:3039578 [details] [associations]
symbol:Ecm2 "extracellular matrix protein 2, female organ
and adipocyte specific" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005614 "interstitial matrix" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IDA] [GO:0030198
"extracellular matrix organization" evidence=IDA] [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0070052 "collagen V
binding" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51450 SMART:SM00214 MGI:MGI:3039578 eggNOG:COG4886
GO:GO:0030198 GO:GO:0008201 GO:GO:0010811
GeneTree:ENSGT00700000104006 GO:GO:0005614 GO:GO:0070052
InterPro:IPR026906 Pfam:PF13306 HSSP:P24014 CTD:1842
HOGENOM:HOG000112319 HOVERGEN:HBG031529 KO:K08119 OrthoDB:EOG4868CR
OMA:AVWSPKP EMBL:AK038812 EMBL:AK040995 EMBL:AK134746 EMBL:BC065151
EMBL:BC089559 IPI:IPI00461535 RefSeq:NP_001012324.1
UniGene:Mm.386931 ProteinModelPortal:Q5FW85 SMR:Q5FW85
STRING:Q5FW85 PhosphoSite:Q5FW85 PRIDE:Q5FW85
Ensembl:ENSMUST00000051504 GeneID:407800 KEGG:mmu:407800
UCSC:uc007qjl.1 InParanoid:Q5FW85 NextBio:407225 Bgee:Q5FW85
Genevestigator:Q5FW85 Uniprot:Q5FW85
Length = 670
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 46/129 (35%), Positives = 70/129 (54%)
Query: 123 DAIRNINENTFNGI-FIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
++I +I + FNG+ ++ L LS I S I P AF+ L+ L LN+ N+L +P +
Sbjct: 324 NSIISIPDEAFNGLPNLERLDLSRNNITSSGIGPKAFKSLK-KLMRLNMDGNNLVHIPSD 382
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRGLELNNN 236
L+ L + D N + I + S S LN LVTL+L NNL+ + +F+ LE +
Sbjct: 383 LPSTLEELKIND---NNLQAIDEKSLSDLNQLVTLELEGNNLSEINVDPLAFQSLESLSY 439
Query: 237 LTLYKNSFR 245
L L +N FR
Sbjct: 440 LRLGRNKFR 448
>UNIPROTKB|O94769 [details] [associations]
symbol:ECM2 "Extracellular matrix protein 2" species:9606
"Homo sapiens" [GO:0005614 "interstitial matrix" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0070052
"collagen V binding" evidence=IEA] [GO:0005178 "integrin binding"
evidence=TAS] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0007160 "cell-matrix adhesion" evidence=TAS]
InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214 GO:GO:0005578
eggNOG:COG4886 GO:GO:0030198 GO:GO:0008201 GO:GO:0005178
GO:GO:0007160 GO:GO:0010811 EMBL:CH471089 EMBL:AL137848
GO:GO:0005614 EMBL:AL157827 CTD:1842 HOGENOM:HOG000112319
HOVERGEN:HBG031529 KO:K08119 OrthoDB:EOG4868CR EMBL:AB011792
EMBL:AK312820 EMBL:BX537976 EMBL:BC107493 IPI:IPI00015315
IPI:IPI00967874 RefSeq:NP_001184224.1 RefSeq:NP_001184225.1
RefSeq:NP_001384.1 UniGene:Hs.117060 ProteinModelPortal:O94769
SMR:O94769 STRING:O94769 PhosphoSite:O94769 PaxDb:O94769
PRIDE:O94769 DNASU:1842 Ensembl:ENST00000344604
Ensembl:ENST00000444490 GeneID:1842 KEGG:hsa:1842 UCSC:uc004asf.4
UCSC:uc011lty.2 GeneCards:GC09M095257 HGNC:HGNC:3154 HPA:HPA035347
MIM:603479 neXtProt:NX_O94769 PharmGKB:PA27599 InParanoid:O94769
OMA:AVWSPKP PhylomeDB:O94769 GenomeRNAi:1842 NextBio:7543
ArrayExpress:O94769 Bgee:O94769 CleanEx:HS_ECM2
Genevestigator:O94769 GermOnline:ENSG00000106823 Uniprot:O94769
Length = 699
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/129 (35%), Positives = 72/129 (55%)
Query: 123 DAIRNINENTFNGI-FIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
++I +I + FNG+ ++ L LS I S I P AF+ L+ L LN+ N+L Q+P +
Sbjct: 353 NSIASIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKLLK-KLMRLNMDGNNLIQIPSQ 411
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRGLELNNN 236
L+ L + ++N + I ++S S LN LVTL+L NNL+ + +F+ L+
Sbjct: 412 LPSTLEELKV---NENNLQAIDEESLSDLNQLVTLELEGNNLSEANVNPLAFKPLKSLAY 468
Query: 237 LTLYKNSFR 245
L L KN FR
Sbjct: 469 LRLGKNKFR 477
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIR--NINENTF---- 133
L + ++ + NI F N + +L LS I+ ITP+AF L +R ++N N
Sbjct: 56 LRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKIT 115
Query: 134 NGIF--IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
N +F + NL L++ ++ I+ AF + F L+ L+L N+LE +P + + + +L
Sbjct: 116 NDMFSGLSNLHHLILNNNQLTLISSTAFDDV-FALEELDLSYNNLETIPWDAVEKMVSLH 174
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N I IP +FS L+ + L ++ N L
Sbjct: 175 TLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKL 207
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
L L++N++ + I + F+G+ NL H +N+ + + I+ F+ +F
Sbjct: 101 LRALHLNSNRLTKITNDMFSGL--SNLH--HLILNN---------NQLTLISSTAFDDVF 147
Query: 138 -IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++ L LS+ + +I +A + +L L+L N ++ +P T HL +T +D++ NK
Sbjct: 148 ALEELDLSYNNLETIPWDAVEKM-VSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNK 206
Query: 197 IGKIPDDS-FSTLNNLVTLKL-SDNNLTLYKNSFRGLELNNNLTL 239
+ K+P D F L T + S + L SF G L+ N L
Sbjct: 207 LQKLPPDPLFQRAQVLATSGIISPSTFAL---SFGGNPLHCNCEL 248
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIR--NINENTF---- 133
L + ++ + NI F N + +L LS I+ ITP+AF L +R ++N N
Sbjct: 56 LRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKIT 115
Query: 134 NGIF--IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
N +F + NL L++ ++ I+ AF + F L+ L+L N+LE +P + + + +L
Sbjct: 116 NDMFSGLSNLHHLILNNNQLTLISSTAFDDV-FALEELDLSYNNLETIPWDAVEKMVSLH 174
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N I IP +FS L+ + L ++ N L
Sbjct: 175 TLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKL 207
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
L L++N++ + I + F+G+ NL H +N+ + + I+ F+ +F
Sbjct: 101 LRALHLNSNRLTKITNDMFSGL--SNLH--HLILNN---------NQLTLISSTAFDDVF 147
Query: 138 -IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++ L LS+ + +I +A + +L L+L N ++ +P T HL +T +D++ NK
Sbjct: 148 ALEELDLSYNNLETIPWDAVEKM-VSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNK 206
Query: 197 IGKIPDDS-FSTLNNLVTLKL-SDNNLTLYKNSFRGLELNNNLTL 239
+ K+P D F L T + S + L SF G L+ N L
Sbjct: 207 LQKLPPDPLFQRAQVLATSGIISPSTFAL---SFGGNPLHCNCEL 248
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIR--NINENTF---- 133
L + ++ + NI F N + +L LS I+ ITP+AF L +R ++N N
Sbjct: 56 LRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKIT 115
Query: 134 NGIF--IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
N +F + NL L++ ++ I+ AF + F L+ L+L N+LE +P + + + +L
Sbjct: 116 NDMFSGLSNLHHLILNNNQLTLISSTAFDDV-FALEELDLSYNNLETIPWDAVEKMVSLH 174
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N I IP +FS L+ + L ++ N L
Sbjct: 175 TLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKL 207
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
L L++N++ + I + F+G+ NL H +N+ + + I+ F+ +F
Sbjct: 101 LRALHLNSNRLTKITNDMFSGL--SNLH--HLILNN---------NQLTLISSTAFDDVF 147
Query: 138 -IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++ L LS+ + +I +A + +L L+L N ++ +P T HL +T +D++ NK
Sbjct: 148 ALEELDLSYNNLETIPWDAVEKM-VSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNK 206
Query: 197 IGKIPDDS-FSTLNNLVTLKL-SDNNLTLYKNSFRGLELNNNLTL 239
+ K+P D F L T + S + L SF G L+ N L
Sbjct: 207 LQKLPPDPLFQRAQVLATSGIISPSTFAL---SFGGNPLHCNCEL 248
>ZFIN|ZDB-GENE-040219-15 [details] [associations]
symbol:tlr5b "toll-like receptor 5b" species:7955
"Danio rerio" [GO:0034146 "toll-like receptor 5 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001819 "positive regulation of cytokine production"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027176
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040219-15 GO:GO:0016021 GO:GO:0007165
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 PANTHER:PTHR24365:SF7
EMBL:FP017156 IPI:IPI00883072 Ensembl:ENSDART00000148798
Uniprot:F8W4F1
Length = 885
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 45/133 (33%), Positives = 71/133 (53%)
Query: 92 NENTFNGIF---IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRI 148
+++TF+G+ IK+ LS+ I S+T + F +L + I L+ +I
Sbjct: 285 DKSTFSGLKSSGIKSFDLSNSSIFSLTYSVFSYLSDLEQIT-------------LAESQI 331
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
N I NAF + LK LNL +N L + T ++LK L ++DLS N I ++ SF L
Sbjct: 332 NKIENNAFLGMTNLLK-LNLSKNFLGYIDFRTFQNLKGLEVLDLSYNHIWRLGSQSFQGL 390
Query: 209 NNLVTLKLSDNNL 221
NL++L L+ N+L
Sbjct: 391 PNLLSLNLTGNSL 403
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/108 (34%), Positives = 58/108 (53%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
++ + LS+ +I+ P+AF+ L +L L L N + ++P L +L L+ L+ NKI
Sbjct: 322 LRRIDLSNNQISEAAPDAFQGLR-SLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKI 380
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
+ D+F L+NL L L DN L T+ K +F L L L +N F
Sbjct: 381 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQNPF 428
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/165 (27%), Positives = 77/165 (46%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
L +N + I I + F G+ ++ LQL +I++I AF+ L + + N
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNR------N 109
Query: 140 NLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK 199
NLQL + TP +R L+L EN ++ +P + R ++ + L N+I
Sbjct: 110 NLQLLSELLFLGTPKLYR--------LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISC 161
Query: 200 IPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
I D +F L +L L L++NN+T L SF + L+ N+
Sbjct: 162 IEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNN 206
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 57/193 (29%), Positives = 90/193 (46%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI- 99
C CS +T + C+ L L N NT+ LDL N + I I + F G+
Sbjct: 28 CSCSGST-----VDCHGLA---LRGVPRNIPRNTE-RLDL---NGNNITRITKTDFAGLR 75
Query: 100 FIKNLQLSHCRINSITPNAFRHLDAI------RN----INENTFNGI-FIKNLQLSHCRI 148
++ LQL +I++I AF+ L + RN ++E F G + L LS +I
Sbjct: 76 HLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQI 135
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+I AFR +K+L L N + + R L++L ++ L+ N I ++ SF+ +
Sbjct: 136 QAIPRKAFRGA-VDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHM 194
Query: 209 NNLVTLKLSDNNL 221
L T +L NNL
Sbjct: 195 PKLRTFRLHSNNL 207
Score = 118 (46.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LY 224
L L N VP E L + K+LTLIDLS N+I + + SFS + L+TL LS N L +
Sbjct: 755 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 813
Query: 225 KNSFRGLELNNNLTLYKN 242
+F GL+ L+L+ N
Sbjct: 814 ARTFDGLKSLRLLSLHGN 831
Score = 77 (32.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 27/110 (24%), Positives = 55/110 (50%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRN----- 127
K+P L + ++N+ I +I E F+G + L L+ R+ ++ F+ L++++
Sbjct: 552 KLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRS 611
Query: 128 -----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ ++F G+ ++ L L +I ++ P +F L +L LNL N
Sbjct: 612 NRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLH-SLSTLNLLAN 660
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/188 (27%), Positives = 92/188 (48%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF---RHLDAIR--- 126
K+P L L +N + I+N++ TF G+ +K+L++ + + AF +++ ++
Sbjct: 213 KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDH 272
Query: 127 -NINENT----FNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
N+ E T + + ++ L LS IN I+P+A+ + L L+L N L ++ +
Sbjct: 273 NNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQ-KLSELDLTFNHLSRLDDSSF 331
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TL--YKNSFRGLELNNNL 237
L L + + NK+ I D +F L +L TL L +N + T+ +F GL+ L
Sbjct: 332 LGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQL 391
Query: 238 TLYKNSFR 245
L N R
Sbjct: 392 ILQGNRIR 399
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 46/167 (27%), Positives = 86/167 (51%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
L+ L ++N+ I + F + +K L +++ R++S+ P F +N + +
Sbjct: 147 LETLDLSNNNISELR-TAFPPLQLKYLYINNNRVSSMEPGYF----------DNLASTLL 195
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ L+L+ RI++I P F+ + L+HL L N ++ V T + L L + + +N +
Sbjct: 196 V--LKLNRNRISAIPPKMFKLPQ--LQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGV 251
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
K+ D +F L+N+ L+L NNLT + K GL + L L +N+
Sbjct: 252 TKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNA 298
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK-NLTLIDLSKN 195
++ L LSH R++ I ++ HL+ +L+ + L N+LE +P L + N+ + L+ N
Sbjct: 75 WVTRLDLSHNRLSFIQTSSLSHLQ-SLQEVKLNNNELETIP--NLGSISANIRQLSLAGN 131
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
I KI + +L TL LS+NN++ + +F L+L LY N+ R
Sbjct: 132 AIDKILPEQLEAFQSLETLDLSNNNISELRTAFPPLQLKY---LYINNNR 178
>UNIPROTKB|Q06828 [details] [associations]
symbol:FMOD "Fibromodulin" species:9606 "Homo sapiens"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0007181 "transforming growth factor beta receptor complex
assembly" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0018146 "keratan
sulfate biosynthetic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0042339
"keratan sulfate metabolic process" evidence=TAS] [GO:0042340
"keratan sulfate catabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR001611 InterPro:IPR027215
PROSITE:PS51450 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0005975
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
EMBL:CH471067 GO:GO:0007181 GO:GO:0042060 GO:GO:0043202
GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0042476 GO:GO:0018146 GO:GO:0042340 CTD:2331
HOGENOM:HOG000234447 HOVERGEN:HBG108061 KO:K08121 OMA:AQYDEDP
OrthoDB:EOG4CJVHR PANTHER:PTHR24371:SF11 EMBL:X72913 EMBL:X75546
EMBL:AK291632 EMBL:AL359837 EMBL:BC035281 IPI:IPI00000860
PIR:S55275 RefSeq:NP_002014.2 UniGene:Hs.519168
ProteinModelPortal:Q06828 SMR:Q06828 IntAct:Q06828 STRING:Q06828
DMDM:223590208 PaxDb:Q06828 PRIDE:Q06828 DNASU:2331
Ensembl:ENST00000354955 GeneID:2331 KEGG:hsa:2331 UCSC:uc001gzr.3
GeneCards:GC01M203311 H-InvDB:HIX0028648 HGNC:HGNC:3774 MIM:600245
neXtProt:NX_Q06828 PharmGKB:PA28190 InParanoid:Q06828
PhylomeDB:Q06828 GenomeRNAi:2331 NextBio:9461 PMAP-CutDB:Q8IV47
ArrayExpress:Q06828 Bgee:Q06828 CleanEx:HS_FMOD
Genevestigator:Q06828 GermOnline:ENSG00000122176 Uniprot:Q06828
Length = 376
Score = 140 (54.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 52/194 (26%), Positives = 94/194 (48%)
Query: 54 QCNDLTNYPLFKATLNKHVNTK--VP--LDLLYINNSAIRNINENTFNG------IFIKN 103
+C+ N+P N+++ VP + +Y N+ I +I E F+ I +
Sbjct: 79 ECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQITSIQEGVFDNATGLLWIALHG 138
Query: 104 LQLSHCRINSITPNAFRHLDAIRNINENTFNGI------FIKNLQLSHCRINSITPNAFR 157
Q++ ++ + RHL+ + ++ N + ++ L L H +I+ + NA
Sbjct: 139 NQITSDKVGRKVFSKLRHLERLY-LDHNNLTRMPGPLPRSLRELHLDHNQISRVPNNALE 197
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
LE L L LQ N++++V ++R L++L L+DLS N + K+PD S L L +
Sbjct: 198 GLE-NLTALYLQHNEIQEVG-SSMRGLRSLILLDLSYNHLRKVPDGLPSALEQLY---ME 252
Query: 218 DNNL-TLYKNSFRG 230
NN+ T+ + FRG
Sbjct: 253 HNNVYTVPDSYFRG 266
>ZFIN|ZDB-GENE-110125-1 [details] [associations]
symbol:rxfp1 "relaxin/insulin-like family peptide
receptor 1" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-110125-1 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 CTD:59350 KO:K04306 EMBL:HM135955
IPI:IPI00969701 RefSeq:NP_001177863.1 UniGene:Dr.159212
ProteinModelPortal:D9IDV5 GeneID:100498669 KEGG:dre:100498669
Uniprot:D9IDV5
Length = 748
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/156 (28%), Positives = 82/156 (52%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIR 126
L LY+ ++ I++++ F G++ + L LS+ RI ++ P+ F+ L +++
Sbjct: 149 LQKLYLQHNRIKSVHPQAFRGLYNLTRLYLSYNRITTLLPDVFQDLHKLEWLILENNSLH 208
Query: 127 NINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFT-LKHLNLQENDLEQVPVETLRHLK 185
+I+ TF+G+ ++L L N++T LE L L+++ N +E V T R
Sbjct: 209 HISSLTFSGL--RSLVLLVLLNNALTKLDDICLEMPRLNWLDIEGNKMETVGNVTFRSCN 266
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
LT++ L +N+I +I +FS L L L LS N +
Sbjct: 267 MLTVLVLQRNRISRIHAQAFSLLRKLGELDLSSNRI 302
>ZFIN|ZDB-GENE-110408-27 [details] [associations]
symbol:rxfp2a "relaxin/insulin-like family peptide
receptor 2a" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
ZFIN:ZDB-GENE-110408-27 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
GeneTree:ENSGT00650000093266 EMBL:CR536612 IPI:IPI00485356
Ensembl:ENSDART00000149137 Bgee:F8W5N7 Uniprot:F8W5N7
Length = 750
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 35 SELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINEN 94
+ L+S S N + LS++ N + P K++ L L++ ++ I ++
Sbjct: 121 ASLRSIPQVSANVTS-LSLKSNKIRTLP--DEAFIKYIK----LQRLFLQDNCINTVSIQ 173
Query: 95 TFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIRNINENTFNGIF-IKNLQ 142
F+G++ ++ L LS I+ ++P FR L + I I NTF G+ + L
Sbjct: 174 AFSGLYKLQKLSLSQNSISLLSPGVFRDLRKLKWLILDDNPITTIAANTFAGLSSLFFLS 233
Query: 143 LSHCRINSITPNA--FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
+ + + ++ P+A H+ F L L+ + N + + + TL ++LT++ L N I +
Sbjct: 234 MVNTSLEAL-PSARLCAHMPF-LSWLDFEGNSITTLGLSTLLDCEHLTVLSLRANLIKSL 291
Query: 201 PDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
P+++F +L + L LS+N++ L F+ L +L L +N
Sbjct: 292 PENTFQSLRMMGDLDLSNNSIKELPVGIFKDLRSLQSLNLSQN 334
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 75/264 (28%), Positives = 116/264 (43%)
Query: 5 FSPFHLVTLILLTALIQGG--SAQ-CPWEDESESELQSTCICSYNTANEL--SIQCND-L 58
F P LV L+ L L+ G AQ CP ++ S IC E+ I N L
Sbjct: 23 FDPL-LVVLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICVRKNLREVPDGISTNTRL 80
Query: 59 TNY-----PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
N + K KH+ L++L ++ + IR I FNG+ + L+L R+
Sbjct: 81 LNLHENQIQIIKVNSFKHLRH---LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 113 SITPNAFRHLDAI-----RN-----INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLE 160
+I AF +L + RN I FN I ++ L L R++ I+ AF L
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L++LNL +L ++P L L L +DLS N + I SF L +L L + +
Sbjct: 198 -NLRYLNLAMCNLREIP--NLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 254
Query: 221 L-TLYKNSFRGLELNNNLTLYKNS 243
+ + +N+F L+ + L N+
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNN 278
>TAIR|locus:2005507 [details] [associations]
symbol:ER "ERECTA" species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0048281
"inflorescence morphogenesis" evidence=IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=IMP] [GO:0042742
"defense response to bacterium" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0050832 "defense response to
fungus" evidence=IMP] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA;IMP] [GO:0001558 "regulation of cell growth"
evidence=IGI;IMP] [GO:0009965 "leaf morphogenesis"
evidence=RCA;IMP] [GO:0010148 "transpiration" evidence=IMP]
[GO:0030155 "regulation of cell adhesion" evidence=IMP] [GO:0051302
"regulation of cell division" evidence=IGI;IMP] [GO:0009664
"plant-type cell wall organization" evidence=IMP] [GO:0008356
"asymmetric cell division" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0031540 "regulation of
anthocyanin biosynthetic process" evidence=RCA] [GO:0019199
"transmembrane receptor protein kinase activity" evidence=ISS]
[GO:2000027 "regulation of organ morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030155 GO:GO:0050832
GO:GO:0001558 eggNOG:COG0515 GO:GO:0042742 SUPFAM:SSF56112
GO:GO:0004674 GO:GO:0010148 GO:GO:0019199 GO:GO:0009965
GO:GO:0009944 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
GO:GO:0048281 GO:GO:0051302 GO:GO:0010103 EMBL:D83257 EMBL:U47029
EMBL:AC004484 EMBL:AY035110 EMBL:FJ708701 EMBL:AK221886
EMBL:EF598332 EMBL:EF598333 EMBL:EF598334 EMBL:EF598335
EMBL:EF598336 EMBL:EF598337 EMBL:EF598338 EMBL:EF598339
EMBL:EF598340 EMBL:EF598341 EMBL:EF598342 EMBL:EF598343
EMBL:EF598344 EMBL:EF598345 EMBL:EF598346 EMBL:EF598347
EMBL:EF598348 EMBL:EF598349 EMBL:EF598350 EMBL:EF598351
EMBL:EF598352 EMBL:EF598353 EMBL:EF598354 IPI:IPI00532140
PIR:B84659 RefSeq:NP_180201.1 UniGene:At.10804 HSSP:P58822
ProteinModelPortal:Q42371 SMR:Q42371 STRING:Q42371 PaxDb:Q42371
PRIDE:Q42371 EnsemblPlants:AT2G26330.1 GeneID:817173
KEGG:ath:AT2G26330 GeneFarm:2563 TAIR:At2g26330 InParanoid:Q42371
OMA:PSSDYCV PhylomeDB:Q42371 ProtClustDB:CLSN2687327 GO:GO:0009664
GO:GO:2000027 Uniprot:Q42371
Length = 976
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 48/156 (30%), Positives = 79/156 (50%)
Query: 79 DLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIR--NINENTFNGI 136
DL NN I ++ + + +L + + + P AF+ L+++ N++ N G
Sbjct: 359 DLNVANNDLEGPIPDHLSSCTNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGP 418
Query: 137 F------IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
I NL LS+ +IN I P++ LE LK +NL N + V +L+++
Sbjct: 419 IPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLLK-MNLSRNHITGVVPGDFGNLRSI 477
Query: 188 TLIDLSKNKI-GKIPDDSFSTLNNLVTLKLSDNNLT 222
IDLS N I G IP++ + L N++ L+L +NNLT
Sbjct: 478 MEIDLSNNDISGPIPEE-LNQLQNIILLRLENNNLT 512
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/111 (31%), Positives = 57/111 (51%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLE-QVPVETLRHLKNLTLIDLSKNK 196
+ +L + + + P AF+ LE ++ +LNL N+++ +PVE L + NL +DLS NK
Sbjct: 381 LNSLNVHGNKFSGTIPRAFQKLE-SMTYLNLSSNNIKGPIPVE-LSRIGNLDTLDLSNNK 438
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFRG 246
I I S L +L+ + LS N++T + F L + L N G
Sbjct: 439 INGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISG 489
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 142 (55.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 47/139 (33%), Positives = 73/139 (52%)
Query: 118 AFRHLDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQV 176
+ RH ++I ++ + F G + L L H +I ++ +AF+ L + LK LNL N + ++
Sbjct: 68 SLRH-NSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGL-YKLKDLNLSSNRITKL 125
Query: 177 PVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSF---RGLE 232
P T HL NL ++DLS N++ + + F L L L L N+L T +F R LE
Sbjct: 126 PNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLE 185
Query: 233 L----NNNL-TLYKNSFRG 246
NN L +L +N F G
Sbjct: 186 YLGLSNNRLRSLARNGFAG 204
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++++ I ++E+ F G++ +K+L LS RI + F HL IN
Sbjct: 88 LTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHL-----IN------- 135
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++ L LS ++ ++ P F L L+ L+L+ N L PV ++L + LS N+
Sbjct: 136 -LQILDLSFNQMTALEPELFHGLR-KLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNR 193
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT 222
+ + + F+ L L L L N+LT
Sbjct: 194 LRSLARNGFAGLIKLRELHLEHNHLT 219
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
+L++ N +T P T +N ++ LDL + +A+ F+G+ + LQ+ H
Sbjct: 114 DLNLSSNRITKLP--NTTFIHLINLQI-LDLSFNQMTALE---PELFHGL--RKLQILHL 165
Query: 110 RINSI--TP-NAF---RHLD-------AIRNINENTFNGIF-IKNLQLSHCRINSITPNA 155
R NS+ TP AF R L+ +R++ N F G+ ++ L L H + I
Sbjct: 166 RSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAH 225
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
F L L+ L LQ N + + L +DL+ N+I + + F TL +L L
Sbjct: 226 FPRL-VALQFLYLQWNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILL 284
Query: 216 LSDNNLT 222
L +N L+
Sbjct: 285 LDNNKLS 291
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 59/195 (30%), Positives = 87/195 (44%)
Query: 57 DLTNYPLF---KATL-NKHVNTKVPLDLLYINNSAIRNINENTFNG-IFIKNLQLSHCRI 111
+LT+ LF + TL N + L L +++S + I TFN I +K L+LS +I
Sbjct: 51 NLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKI 110
Query: 112 NSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEN 171
+ P+A LD N + ++ L L + S+ N F+ L L+ L L +N
Sbjct: 111 THL-PSAL--LD----------NLVLLEQLFLDGNELKSLDQNLFQKLVH-LQELFLNQN 156
Query: 172 DLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRG 230
L +P HL NL L+DLS N + +P+ F L L L N L +L
Sbjct: 157 QLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDS 216
Query: 231 LELNNNLTLYKNSFR 245
L L L+ N R
Sbjct: 217 LRALTELQLHTNHLR 231
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 52/167 (31%), Positives = 77/167 (46%)
Query: 66 ATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAI 125
A+L H+ L LL ++ + + ++ E F G+ +K LQ N + LD++
Sbjct: 163 ASLFTHLGN---LKLLDLSGNNLTHLPEGLF-GVQVK-LQKLLLHSNRLASLESGLLDSL 217
Query: 126 RNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
R + E LQL + SI P AF L +L L L EN LE +P H
Sbjct: 218 RALTE----------LQLHTNHLRSIVPGAFDRLR-SLSSLTLSENRLEFLPSALFLHSH 266
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGL 231
NLT + LS+N + ++P F + L L+L L TL +FR L
Sbjct: 267 NLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNL 313
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 51 LSIQCNDLTNYP--LFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLS 107
L + N+LT+ P LF +V L L ++++ + ++ + + + LQL
Sbjct: 175 LDLSGNNLTHLPEGLF--------GVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLH 226
Query: 108 HCRINSITPNAFRHLDAIRNI--NENTF----NGIFIKN-----LQLSHCRINSITPNAF 156
+ SI P AF L ++ ++ +EN + +F+ + L LS + + F
Sbjct: 227 TNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLF 286
Query: 157 RHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN-KIGKIPDDSFSTLNNLVTLK 215
+ L+ L L+ L +P R+L L ++++S + ++ +P+D+F L L L
Sbjct: 287 GEIG-GLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLA 345
Query: 216 LSDNNL-TLYKNSFRGLELNNNLTLYKNSFR 245
LS L +L RGL +++L N R
Sbjct: 346 LSSTGLASLPAGLLRGLCRLRHVSLRSNRLR 376
Score = 113 (44.8 bits), Expect = 0.0010, P = 0.0010
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------- 129
L L ++ + + + + F I ++ L+L ++ ++ AFR+L +R +
Sbjct: 268 LTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRL 327
Query: 130 ----ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
E+ F G+ ++ L LS + S+ R L L+H++L+ N L +P R+L
Sbjct: 328 SALPEDAFRGLGELQVLALSSTGLASLPAGLLRGL-CRLRHVSLRSNRLRALPSALFRNL 386
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
+L + L N++ +P D+F L L + L N
Sbjct: 387 SSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHN 421
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 46/143 (32%), Positives = 73/143 (51%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L LY+ N++I + F + + L L+ RI+ IT + FR LD +R
Sbjct: 77 LHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRI--------- 127
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
L L+ +IN + FR L+ L+ L+LQEN LE + + L L +L L+DLS+N
Sbjct: 128 ----LYLAGNQINRLEDYTFRGLQ-RLQELHLQENVLEVLGDQALVGLSSLALLDLSRNN 182
Query: 197 IGKIPDDSFSTLNNLVTLKLSDN 219
+ + S L +L L+++DN
Sbjct: 183 LRTLSPASLKPLVSLQVLRVTDN 205
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 53/159 (33%), Positives = 78/159 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN-----INENT 132
L LYIN++ I I+ N F+G+ KNL H N + R D+ N I EN
Sbjct: 145 LQELYINHNQISTISANAFSGL--KNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202
Query: 133 FNGIFIKNLQ-LSHCR--------INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
GI N + LS+ R + + NA L+ +L+ L+ +N L +VP L+
Sbjct: 203 VIGILDMNFRPLSNLRSLVLAGMYLTDVPGNALVGLD-SLESLSFYDNKLIKVPQLALQK 261
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK-LSDNNL 221
+ NL +DL+KN I KI + F N++ LK L NN+
Sbjct: 262 VPNLKFLDLNKNPIHKIQEGDFK---NMLRLKELGINNM 297
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/243 (26%), Positives = 117/243 (48%)
Query: 14 ILLTALIQGG--SAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKH 71
+L+T+L + +++CP E T +Y A ++ CNDL L + N
Sbjct: 17 LLITSLTESSILTSECPQLCVCEIRPWFTPQSTYREAT--TVDCNDLR---LTRIPGNLS 71
Query: 72 VNTKVPLDLLYINNSAIRNINE--NTFNGI---FIKN--LQLSHCRINSITPNAFRHLDA 124
+T+V LL +N+ + ++E FN F +N + + ++T HL+
Sbjct: 72 SDTQV---LLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEE 128
Query: 125 IRNINENTFNGIF-IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
I+E T + + NLQ ++H +I++I+ NAF L+ L+ L+L N L+ +
Sbjct: 129 -NQISEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLR-LHLNSNKLKVIDSRW 186
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
NL ++ + +N + I D +F L+NL +L L+ LT + N+ GL+ +L+
Sbjct: 187 FDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSF 246
Query: 240 YKN 242
Y N
Sbjct: 247 YDN 249
>UNIPROTKB|O15455 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS] [GO:0006972 "hyperosmotic response" evidence=NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IDA;NAS]
[GO:0045671 "negative regulation of osteoclast differentiation"
evidence=NAS] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IMP;IDA] [GO:0009597 "detection of virus"
evidence=NAS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEP] [GO:0042742 "defense response to bacterium"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0010008 "endosome membrane" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0036020 "endolysosome membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0032728
"positive regulation of interferon-beta production" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IDA] [GO:0032722
"positive regulation of chemokine production" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IC] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 Reactome:REACT_6900 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 GO:GO:0043123 GO:GO:0042742
GO:GO:0006954 GO:GO:0046330 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0051607 GO:GO:0006972 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 EMBL:CH471056 GO:GO:0003725 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0007250 GO:GO:0004888
GO:GO:0032760 GO:GO:0008063 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0052033 GO:GO:0045671 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0002282 GO:GO:0032728
GO:GO:0009597 GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200
GO:GO:0071360 GO:GO:0045359 Orphanet:1930 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 EMBL:U88879 EMBL:DQ445682 EMBL:AB445631
EMBL:BC096333 EMBL:BC096334 EMBL:BC096335 IPI:IPI00019007
RefSeq:NP_003256.1 UniGene:Hs.657724 PDB:1ZIW PDB:2A0Z PDB:3ULU
PDB:3ULV PDBsum:1ZIW PDBsum:2A0Z PDBsum:3ULU PDBsum:3ULV
ProteinModelPortal:O15455 SMR:O15455 DIP:DIP-29660N IntAct:O15455
MINT:MINT-2840066 STRING:O15455 PhosphoSite:O15455 PaxDb:O15455
PRIDE:O15455 Ensembl:ENST00000296795 GeneID:7098 KEGG:hsa:7098
UCSC:uc003iyq.3 GeneCards:GC04P186990 HGNC:HGNC:11849 HPA:CAB025658
MIM:603029 MIM:613002 neXtProt:NX_O15455 PharmGKB:PA36551
HOGENOM:HOG000251618 InParanoid:O15455 OMA:IANINDD PhylomeDB:O15455
ChEMBL:CHEMBL1075113 EvolutionaryTrace:O15455 GenomeRNAi:7098
NextBio:27769 ArrayExpress:O15455 Bgee:O15455 CleanEx:HS_TLR3
Genevestigator:O15455 GermOnline:ENSG00000164342 GO:GO:0036020
GO:GO:0045356 GO:GO:0034346 Uniprot:O15455
Length = 904
Score = 144 (55.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 61/194 (31%), Positives = 92/194 (47%)
Query: 57 DLTNYPLFKATLNKHVNTKVPLDLLYINNS--AIRNINENTFNGIFIKNLQLSHCRINSI 114
DL++ L L V + +LL NN A+++ + F +K L+LS +I
Sbjct: 153 DLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEF 212
Query: 115 TPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFT-LKHLNLQENDL 173
+P F H AI + F G+F+ N+QL S+T L T +++L+L + L
Sbjct: 213 SPGCF-H--AIGRL----F-GLFLNNVQLGP----SLTEKLCLELANTSIRNLSLSNSQL 260
Query: 174 EQVPVETLRHLK--NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRG 230
T LK NLT++DLS N + + +DSF+ L L L NN+ L+ +S G
Sbjct: 261 STTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHG 320
Query: 231 LELNNNLTLYKNSF 244
L L L K SF
Sbjct: 321 LFNVRYLNL-KRSF 333
Score = 124 (48.7 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 43/135 (31%), Positives = 65/135 (48%)
Query: 113 SITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQEND 172
++T N R L A N ++ + +L + I+ + P + L LK LNLQ N+
Sbjct: 57 NLTHNQLRRLPAA---NFTRYSQL--TSLDVGFNTISKLEPELCQKLPM-LKVLNLQHNE 110
Query: 173 LEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
L Q+ +T NLT + L N I KI ++ F NL+TL LS N L+ K + ++
Sbjct: 111 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ-VQ 169
Query: 233 LNN--NLTLYKNSFR 245
L N L L N +
Sbjct: 170 LENLQELLLSNNKIQ 184
>TAIR|locus:2042599 [details] [associations]
symbol:AT2G16250 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0009505 "plant-type cell wall" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0002237 "response to
molecule of bacterial origin" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0009505 EMBL:AC007047
EMBL:FJ708694 IPI:IPI00527463 PIR:C84538 RefSeq:NP_179220.2
UniGene:At.52766 ProteinModelPortal:C0LGK4 SMR:C0LGK4 PaxDb:C0LGK4
PRIDE:C0LGK4 EnsemblPlants:AT2G16250.1 GeneID:816121
KEGG:ath:AT2G16250 GeneFarm:2730 TAIR:At2g16250 eggNOG:NOG321813
HOGENOM:HOG000240381 InParanoid:Q9SIX4 OMA:AIFGSWR PhylomeDB:C0LGK4
ProtClustDB:CLSN2918663 Uniprot:C0LGK4
Length = 915
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
L LS C +N + P +L +L+ LNL +N L + +L L NL+ +DLS+N +
Sbjct: 133 LDLSSCSVNGVVPFTLGNLT-SLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGV 191
Query: 201 PDDSFSTLNNLVTLKLSDNNLT 222
SFS+L NL+TL +S N LT
Sbjct: 192 LPQSFSSLKNLLTLDVSSNYLT 213
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL +L ++ LSKN+I +I +F+ L NL+TL+L DN L L
Sbjct: 90 RYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPL 149
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 150 VPSQAFEYLSKLRELWLRNN 169
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 70/263 (26%), Positives = 118/263 (44%)
Query: 5 FSPFHLVTLILLTALIQG-GSAQ-CPWEDESESELQSTCICSYNTANELSIQCNDLTNY- 61
F P L+ L L ++ G AQ CP ++ S IC+ ++ + T Y
Sbjct: 24 FDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICTRRGLKDVPDGVSTNTRYL 82
Query: 62 -------PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKN-LQLSHCRINS 113
+ K KH+ L++L ++ + IRNI FNG+ N L+L R+ +
Sbjct: 83 NLQDNQIQVIKVDSFKHLRH---LEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTT 139
Query: 114 ITPNAFRHLDAIRNI--NENTFNGI----F-----IKNLQLSHC-RINSITPNAFRHLEF 161
I AF +L ++ + N I F ++ L L R++ I+ AF+ L
Sbjct: 140 IPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLS- 198
Query: 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
L++LNL +L++VP ++ L L +++S N++ I SF L +L L + +
Sbjct: 199 NLRYLNLGMCNLKEVP--NIQPLIRLDELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQV 256
Query: 222 -TLYKNSFRGLELNNNLTLYKNS 243
T+ +NSF L L L N+
Sbjct: 257 QTIERNSFDDLHSLRELNLAHNN 279
>UNIPROTKB|P51890 [details] [associations]
symbol:LUM "Lumican" species:9031 "Gallus gallus"
[GO:0007601 "visual perception" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 GO:GO:0005615 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:M80584 IPI:IPI00592361 PIR:A41748
RefSeq:XP_416135.1 UniGene:Gga.4078 ProteinModelPortal:P51890
PRIDE:P51890 Ensembl:ENSGALT00000018392 GeneID:417891
KEGG:gga:417891 InParanoid:P51890 NextBio:20821127 Uniprot:P51890
Length = 343
Score = 138 (53.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 60/206 (29%), Positives = 96/206 (46%)
Query: 54 QCNDLTNYPLFKATLNKHVNTK--VP--LDLLYINNSAIRNINENTFNGIF-IKNLQLSH 108
+CN +YP N + T VP + LY+ N+ I I ENTF+ + ++ L L H
Sbjct: 43 ECNCPLSYPTAMYCDNLKLKTIPIVPSGIKYLYLRNNMIEAIEENTFDNVTDLQWLILDH 102
Query: 109 CRI-NS-ITPNAFRHLDAIR--NINENTFN---GIFIK---NLQLSHCRINSITPNAFRH 158
+ NS I F L ++ +IN N G K +LQLSH +I + P A
Sbjct: 103 NHLENSKIKGRVFSKLKNLKKLHINYNNLTEAVGPLPKTLDDLQLSHNKITKVNPGALEG 162
Query: 159 LEFTLKHLNLQENDLEQVPVE-TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
L L ++LQ N L+ + + L +L +DLS N++ K+P ++L+ L
Sbjct: 163 L-VNLTVIHLQNNQLKTDSISGAFKGLNSLLYLDLSFNQLTKLPT---GLPHSLLMLYFD 218
Query: 218 DNNLTLYKNS-FRGLELNNNLTLYKN 242
+N ++ + F+G + L L N
Sbjct: 219 NNQISNIPDEYFQGFKTLQYLRLSHN 244
Score = 119 (46.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 101 IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLE 160
+ +LQLSH +I + P A L+ + N+ I ++N QL + +SI+ AF+ L
Sbjct: 142 LDDLQLSHNKITKVNPGA---LEGLVNLTV-----IHLQNNQL---KTDSIS-GAFKGLN 189
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
+L +L+L N L ++P L H +L ++ N+I IPD+ F L L+LS N
Sbjct: 190 -SLLYLDLSFNQLTKLPTG-LPH--SLLMLYFDNNQISNIPDEYFQGFKTLQYLRLSHNK 245
Query: 221 LT 222
LT
Sbjct: 246 LT 247
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 75/264 (28%), Positives = 116/264 (43%)
Query: 5 FSPFHLVTLILLTALIQGG--SAQ-CPWEDESESELQSTCICSYNTANEL--SIQCND-L 58
F P LV L+ L L+ G AQ CP ++ S IC E+ I N L
Sbjct: 23 FDPL-LVVLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICVRKNLREVPDGISTNTRL 80
Query: 59 TNY-----PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
N + K KH+ L++L ++ + IR I FNG+ + L+L R+
Sbjct: 81 LNLHENQIQIIKVNSFKHLRH---LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 113 SITPNAFRHLDAI-----RN-----INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLE 160
+I AF +L + RN I FN I ++ L L R++ I+ AF L
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L++LNL +L ++P L L L +DLS N + I SF L +L L + +
Sbjct: 198 -NLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 254
Query: 221 L-TLYKNSFRGLELNNNLTLYKNS 243
+ + +N+F L+ + L N+
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNN 278
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 75/264 (28%), Positives = 116/264 (43%)
Query: 5 FSPFHLVTLILLTALIQGG--SAQ-CPWEDESESELQSTCICSYNTANEL--SIQCND-L 58
F P LV L+ L L+ G AQ CP ++ S IC E+ I N L
Sbjct: 23 FDPL-LVVLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICVRKNLREVPDGISTNTRL 80
Query: 59 TNY-----PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
N + K KH+ L++L ++ + IR I FNG+ + L+L R+
Sbjct: 81 LNLHENQIQIIKVNSFKHLRH---LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 113 SITPNAFRHLDAI-----RN-----INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLE 160
+I AF +L + RN I FN I ++ L L R++ I+ AF L
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L++LNL +L ++P L L L +DLS N + I SF L +L L + +
Sbjct: 198 -NLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 254
Query: 221 L-TLYKNSFRGLELNNNLTLYKNS 243
+ + +N+F L+ + L N+
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNN 278
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 75/264 (28%), Positives = 116/264 (43%)
Query: 5 FSPFHLVTLILLTALIQGG--SAQ-CPWEDESESELQSTCICSYNTANEL--SIQCND-L 58
F P LV L+ L L+ G AQ CP ++ S IC E+ I N L
Sbjct: 23 FDPL-LVVLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICVRKNLREVPDGISTNTRL 80
Query: 59 TNY-----PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
N + K KH+ L++L ++ + IR I FNG+ + L+L R+
Sbjct: 81 LNLHENQIQIIKVNSFKHLRH---LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 113 SITPNAFRHLDAI-----RN-----INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLE 160
+I AF +L + RN I FN I ++ L L R++ I+ AF L
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L++LNL +L ++P L L L +DLS N + I SF L +L L + +
Sbjct: 198 -NLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 254
Query: 221 L-TLYKNSFRGLELNNNLTLYKNS 243
+ + +N+F L+ + L N+
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNN 278
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 75/264 (28%), Positives = 116/264 (43%)
Query: 5 FSPFHLVTLILLTALIQGG--SAQ-CPWEDESESELQSTCICSYNTANEL--SIQCND-L 58
F P LV L+ L L+ G AQ CP ++ S IC E+ I N L
Sbjct: 23 FDPL-LVVLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICVRKNLREVPDGISTNTRL 80
Query: 59 TNY-----PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
N + K KH+ L++L ++ + IR I FNG+ + L+L R+
Sbjct: 81 LNLHENQIQIIKVNSFKHLRH---LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 113 SITPNAFRHLDAI-----RN-----INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLE 160
+I AF +L + RN I FN I ++ L L R++ I+ AF L
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L++LNL +L ++P L L L +DLS N + I SF L +L L + +
Sbjct: 198 -NLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 254
Query: 221 L-TLYKNSFRGLELNNNLTLYKNS 243
+ + +N+F L+ + L N+
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNN 278
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 133 (51.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+++ + F G+ + L L H I S+ +AF+ L +K L L N + Q+P T
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLR-RVKELTLSSNQITQLPNTTF 133
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-----LYKN--SFRGLELN 234
R + NL +DLS NK+ + D F L L TL + N + ++++ S + L++
Sbjct: 134 RPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIG 193
Query: 235 -NNL-TLYKNSFRG 246
N L +L +NSF G
Sbjct: 194 YNQLKSLARNSFAG 207
Score = 118 (46.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 37/153 (24%), Positives = 77/153 (50%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI----NENTF-- 133
L + +++ + F G+ + L L H I S+ +AF+ L ++ + N+ T
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLP 129
Query: 134 NGIF-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
N F ++++ LS+ ++ ++ P+ F L L L+++ N ++ VPV + ++L
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLR-KLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+D+ N++ + +SF+ L L L L N+L
Sbjct: 189 FLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
>MGI|MGI:1920564 [details] [associations]
symbol:Lrrc69 "leucine rich repeat containing 69"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1920564 eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 HSSP:P21793 EMBL:AK006601
EMBL:AK161371 EMBL:AL772236 IPI:IPI00113010 RefSeq:NP_082775.1
UniGene:Mm.52613 ProteinModelPortal:Q9D9Q0 SMR:Q9D9Q0
PhosphoSite:Q9D9Q0 PRIDE:Q9D9Q0 Ensembl:ENSMUST00000023917
Ensembl:ENSMUST00000108276 GeneID:73314 KEGG:mmu:73314
UCSC:uc008sba.1 CTD:100130742 GeneTree:ENSGT00700000104535
HOGENOM:HOG000007755 HOVERGEN:HBG108103 InParanoid:Q9D9Q0
OMA:NTWLECV OrthoDB:EOG447FVC NextBio:337931 Bgee:Q9D9Q0
Genevestigator:Q9D9Q0 Uniprot:Q9D9Q0
Length = 347
Score = 138 (53.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 53/198 (26%), Positives = 93/198 (46%)
Query: 46 NTANEL-SIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNL 104
+T +L +++ DL N + K + T L LL + N+ ++ + E +KNL
Sbjct: 31 STLEKLPNLKTLDLQNNSISKVC--PELRTLTQLTLLNLGNNHLQEVPEEIKYLTSLKNL 88
Query: 105 QLSHCRINSITPNAFRHLDAI--RNINENTFNGI--FIKNLQ-LSHCRIN----SITPNA 155
L RI I P F L + N+N+N + I L+ L++ +N ++ P
Sbjct: 89 HLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKE 148
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
LE L L+L N + +P E ++ LKNL + L +N I ++P++ L L L
Sbjct: 149 LCSLEH-LSELHLNYNQIVYIP-EEIKFLKNLQQLFLVRNNIEELPEE-ICHLEKLRVLD 205
Query: 216 LSDNNLTLYKNSFRGLEL 233
++ N + ++ F+ L L
Sbjct: 206 IAGNVIQIFPAGFQNLRL 223
Score = 120 (47.3 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 34/106 (32%), Positives = 55/106 (51%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+K L L + I+ + P + TL LNL N L++VP E +++L +L + L N+I
Sbjct: 39 LKTLDLQNNSISKVCPELRTLTQLTL--LNLGNNHLQEVP-EEIKYLTSLKNLHLFGNRI 95
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
+I F+ L+ L+ L L+DN LT L L+L +N+
Sbjct: 96 CRIAPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNN 141
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 141 (54.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++ +AI ++ + F+ +F ++ L L H NA HL ++ + N
Sbjct: 219 LQELFLDGNAITELSPHLFSQLFSLEMLWLQH--------NAICHLPV--SLFSSLHNLT 268
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
F L L + ++ F H + L HL+L N LE +P +L L + LS N
Sbjct: 269 F---LSLKDNALRTLPEGLFAHNQGLL-HLSLSYNQLETIPEGAFTNLSRLVSLTLSHNA 324
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
I +P+ F L LV L L NNLT L+ F L L L +N
Sbjct: 325 ITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRN 371
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/150 (23%), Positives = 81/150 (54%)
Query: 85 NSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHL----------DAIRNINENTF 133
N+ +R++ + F G+ +++L+++ +++++ + F +L D + + E+ F
Sbjct: 82 NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLF 141
Query: 134 NGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDL 192
+ +++LQL ++ ++ F+ L L+ LNL +N L Q+P + L L ++ L
Sbjct: 142 CHMDILESLQLQGNQLRTLPGRLFQSLR-DLRTLNLAQNLLTQLPKGAFQSLTGLQMLKL 200
Query: 193 SKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
S N + ++P+ + +L++L L L N +T
Sbjct: 201 SNNMLARLPEGALGSLSSLQELFLDGNAIT 230
Score = 123 (48.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 47/198 (23%), Positives = 93/198 (46%)
Query: 35 SELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKV-PLDLLYINNSAIRNINE 93
+ L + S ++ EL + N +T L+ H+ +++ L++L++ ++AI ++
Sbjct: 206 ARLPEGALGSLSSLQELFLDGNAITE-------LSPHLFSQLFSLEMLWLQHNAICHLPV 258
Query: 94 NTFNGIF-IKNLQLSHCRINSITPNAFRH----------LDAIRNINENTFNGIF-IKNL 141
+ F+ + + L L + ++ F H + + I E F + + +L
Sbjct: 259 SLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSL 318
Query: 142 QLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIP 201
LSH I + + FR+LE +K L+L N+L + +L L L++LS+N++ +P
Sbjct: 319 TLSHNAITDLPEHVFRNLEQLVK-LSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLP 377
Query: 202 DDSFSTLNNLVTLKLSDN 219
F T +L L L N
Sbjct: 378 GGIFDTNYDLFNLALLGN 395
>UNIPROTKB|O60938 [details] [associations]
symbol:KERA "Keratocan" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0018146 "keratan sulfate biosynthetic process" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0042339 "keratan sulfate metabolic process" evidence=TAS]
[GO:0042340 "keratan sulfate catabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001611 PROSITE:PS51450 Reactome:REACT_116125
GO:GO:0005975 GO:GO:0007601 GO:GO:0005578 eggNOG:COG4886
GO:GO:0050896 GO:GO:0043202 GO:GO:0005796 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0061303 GO:GO:0018146
GO:GO:0042340 HOGENOM:HOG000234447 HOVERGEN:HBG108061 CTD:11081
KO:K08123 OrthoDB:EOG4KSPK3 OMA:RWINLNK EMBL:AF065988 EMBL:AF063301
EMBL:AF205403 EMBL:BC032667 IPI:IPI00013049 RefSeq:NP_008966.1
UniGene:Hs.125750 ProteinModelPortal:O60938 SMR:O60938
STRING:O60938 PhosphoSite:O60938 PRIDE:O60938 DNASU:11081
Ensembl:ENST00000266719 GeneID:11081 KEGG:hsa:11081 UCSC:uc001tbl.3
GeneCards:GC12M091377 HGNC:HGNC:6309 HPA:HPA039321 MIM:217300
MIM:603288 neXtProt:NX_O60938 Orphanet:53691 PharmGKB:PA30088
InParanoid:O60938 PhylomeDB:O60938 GenomeRNAi:11081 NextBio:42130
Bgee:O60938 CleanEx:HS_KERA Genevestigator:O60938
GermOnline:ENSG00000139330 Uniprot:O60938
Length = 352
Score = 138 (53.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 42/127 (33%), Positives = 67/127 (52%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I I E F N ++ + L+ +I + I A L+ L L L++N+LE+VP
Sbjct: 83 IETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLK-KLLFLFLEDNELEEVPSPLP 141
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRGLELNNNLT 238
R L+ L L++NK+ +IP +FS L NL L L +N L +++F+GL+ L
Sbjct: 142 RSLEQL---QLARNKVSRIPQGTFSNLENLTLLDLQNNKLVDNAFQRDTFKGLKNLMQLN 198
Query: 239 LYKNSFR 245
+ KN+ R
Sbjct: 199 MAKNALR 205
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00060
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 62 PLFKATLNKHVN-TKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR 120
P AT + +N K + I A+ + + F +F+++ +L + S P +
Sbjct: 90 PFENATQLRWINLNKNKITNYGIEKGALSQLKKLLF--LFLEDNELEE--VPSPLPRSLE 145
Query: 121 HLDAIRN----INENTFNGIFIKNLQLSHCRINSITPNAFRHLEF----TLKHLNLQEND 172
L RN I + TF+ + +NL L + N + NAF+ F L LN+ +N
Sbjct: 146 QLQLARNKVSRIPQGTFSNL--ENLTLLDLQNNKLVDNAFQRDTFKGLKNLMQLNMAKNA 203
Query: 173 LEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
L +P R N + L N I IP++ F+ + + L+L+ N L+ RG +
Sbjct: 204 LRNMPP---RLPANTMQLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDEGLPSRGFD 260
Query: 233 LNNNLTL 239
+++ L L
Sbjct: 261 VSSILDL 267
>FB|FBgn0028370 [details] [associations]
symbol:kek3 "kekkon-3" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005887 "integral
to plasma membrane" evidence=ISM] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
GeneTree:ENSGT00700000104028 KO:K07523 HSSP:P13596 EMBL:BT044530
RefSeq:NP_001162986.1 RefSeq:NP_523575.1 UniGene:Dm.21548
SMR:Q9V430 IntAct:Q9V430 MINT:MINT-324955
EnsemblMetazoa:FBtr0080752 EnsemblMetazoa:FBtr0300848 GeneID:34912
KEGG:dme:Dmel_CG4192 UCSC:CG4192-RA CTD:34912 FlyBase:FBgn0028370
InParanoid:Q9V430 OMA:KMKETCD OrthoDB:EOG4P2NH5 GenomeRNAi:34912
NextBio:790842 Uniprot:Q9V430
Length = 1021
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 41/112 (36%), Positives = 62/112 (55%)
Query: 125 IRNINENTFNGIFIKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I+ I +++F + NLQ L+ C + I +AFR L L L+L +N L +P L
Sbjct: 122 IQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKL-INLVELDLSQNLLSAIPSLAL 180
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLE 232
H+ L + LS N I ++PDD+F + LV L+LSD L+ + +F GLE
Sbjct: 181 YHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLE 232
>TAIR|locus:2154709 [details] [associations]
symbol:PSKR2 "phytosylfokine-alpha receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;ISS] [GO:0004713 "protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0001653 "peptide
receptor activity" evidence=IMP] [GO:0009611 "response to wounding"
evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0009611 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 Gene3D:2.60.120.200 InterPro:IPR013320
InterPro:IPR025875 Pfam:PF12799 EMBL:AB007644 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 GO:GO:0001653 EMBL:AY064019
EMBL:AY091180 IPI:IPI00522574 RefSeq:NP_200200.1 UniGene:At.27101
ProteinModelPortal:Q9FN37 SMR:Q9FN37 PRIDE:Q9FN37
EnsemblPlants:AT5G53890.1 GeneID:835470 KEGG:ath:AT5G53890
GeneFarm:609 TAIR:At5g53890 InParanoid:Q9FN37 OMA:HKVCEPN
PhylomeDB:Q9FN37 ProtClustDB:CLSN2686570 Genevestigator:Q9FN37
Uniprot:Q9FN37
Length = 1036
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 55/208 (26%), Positives = 103/208 (49%)
Query: 43 CSYNTANELSIQCNDLTNY-PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFI 101
CS + +L I N LT P + ++ + ++ L Y++ +N++ +G+
Sbjct: 206 CS-KSIQQLHIDSNRLTGQLPDYLYSIREL--EQLSLSGNYLSGELSKNLSN--LSGL-- 258
Query: 102 KNLQLSHCRINSITPNAFRHLDAIRN--INENTFNGIFIKNL-QLSHCRINSITPNAFR- 157
K+L +S R + + P+ F +L + + ++ N F+G F +L Q S R+ + N+
Sbjct: 259 KSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSG 318
Query: 158 --HLEFT----LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI-GKIPDDSFSTLNN 210
+L FT L L+L N ++L H + ++ L+KN+ GKIPD +F L +
Sbjct: 319 SINLNFTGFTDLCVLDLASNHFSGPLPDSLGHCPKMKILSLAKNEFRGKIPD-TFKNLQS 377
Query: 211 LVTLKLSDNNLTLYKNSFRGLELNNNLT 238
L+ L LS+N+ + + L+ NL+
Sbjct: 378 LLFLSLSNNSFVDFSETMNVLQHCRNLS 405
>UNIPROTKB|G3N218 [details] [associations]
symbol:G3N218 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:DAAA02073610
Ensembl:ENSBTAT00000066321 Uniprot:G3N218
Length = 478
Score = 140 (54.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 59/242 (24%), Positives = 106/242 (43%)
Query: 17 TALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKV 76
+A++ G + ED + + C+CS + S++C+ +A L + V +
Sbjct: 7 SAMVLGLPSTWAAEDTCVNACPAACVCS-SVERRCSVRCD--------RAGLLR-VPAEF 56
Query: 77 PLDLLYIN--NSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFR-----------HL 122
P + I+ + +R + E F + ++ L L H ++ ITP AF+ H
Sbjct: 57 PCEAASIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELSLAHN 116
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+R ++ TF + ++ L L+ CR+ S+ L L+ L +N +VP L
Sbjct: 117 GDLRYLHARTFTALGRLRRLDLTVCRLFSVPERLLAELP-ALRELAAFDNLFRRVP-GAL 174
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLY 240
R L NLT L +++I + S L L +L L N + ++ +FR +L L
Sbjct: 175 RGLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQGNRVRAVHGGAFRDCSALEHLLLN 234
Query: 241 KN 242
N
Sbjct: 235 DN 236
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 43/167 (25%), Positives = 75/167 (44%)
Query: 79 DLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
+L +N +R ++ TF + ++ L L+ CR+ S+ L A+R + F+ +F
Sbjct: 110 ELSLAHNGDLRYLHARTFTALGRLRRLDLTVCRLFSVPERLLAELPALRELA--AFDNLF 167
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ P A R L L H +L+ + +E V +L L+ L + L N++
Sbjct: 168 RR------------VPGALRGLA-NLTHAHLERSRIEAVASSSLLGLRRLRSLSLQGNRV 214
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+ +F + L L L+DN L L ++F GL L L N+
Sbjct: 215 RAVHGGAFRDCSALEHLLLNDNLLAALPADAFLGLRRLRTLNLGGNA 261
>TAIR|locus:2138268 [details] [associations]
symbol:AT4G08850 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006857 "oligopeptide transport" evidence=RCA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0031347 "regulation of defense response"
evidence=RCA] InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 GO:GO:0004713 EMBL:AL161513 InterPro:IPR025875
Pfam:PF12799 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
HSSP:P58822 EMBL:AL161813 EMBL:AY064972 EMBL:AK317056 EMBL:FJ708744
EMBL:AF083700 IPI:IPI00543136 IPI:IPI00545064 PIR:B85089
RefSeq:NP_192625.4 RefSeq:NP_849538.2 UniGene:At.19749
UniGene:At.47927 UniGene:At.67694 ProteinModelPortal:Q8VZG8
SMR:Q8VZG8 IntAct:Q8VZG8 STRING:Q8VZG8 PaxDb:Q8VZG8 PRIDE:Q8VZG8
EnsemblPlants:AT4G08850.1 GeneID:826456 KEGG:ath:AT4G08850
GeneFarm:667 TAIR:At4g08850 InParanoid:Q8VZG8 OMA:PELAYAM
PhylomeDB:Q8VZG8 ProtClustDB:CLSN2708515 Uniprot:Q8VZG8
Length = 1045
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 84 NNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGIF---- 137
NNS I +N + L LS RI P + +++ I + N N +G
Sbjct: 487 NNSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGI 546
Query: 138 --IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDL 192
+ NL+ LS R +S P +L L ++NL NDL+Q E L L L ++DL
Sbjct: 547 RLLTNLEYLDLSSNRFSSEIPPTLNNLP-RLYYMNLSRNDLDQTIPEGLTKLSQLQMLDL 605
Query: 193 SKNKI-GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSFRG 246
S N++ G+I F +L NL L LS NNL+ SF+ + ++ + N+ +G
Sbjct: 606 SYNQLDGEI-SSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQG 660
>WB|WBGene00011345 [details] [associations]
symbol:dma-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016358
"dendrite development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 EMBL:Z75713 PIR:T24315
RefSeq:NP_492253.1 ProteinModelPortal:Q22075 SMR:Q22075
STRING:Q22075 PaxDb:Q22075 EnsemblMetazoa:T01G9.3 GeneID:187968
KEGG:cel:CELE_T01G9.3 UCSC:T01G9.3 CTD:187968 WormBase:T01G9.3
HOGENOM:HOG000017308 InParanoid:Q22075 OMA:LTMANTH NextBio:937126
Uniprot:Q22075
Length = 603
Score = 141 (54.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 51/189 (26%), Positives = 97/189 (51%)
Query: 52 SIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCR 110
S++ DL + + AT++ + L +L ++++ + + F + +++L LS+
Sbjct: 112 SLEVLDLHSNNIEHATMS-NFGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNT 170
Query: 111 INSITPNAFRHLDAIR--NINENTF-----NGIF-----IKNLQLSHCRINSITPNAFRH 158
I+ ++ N R L+++R ++ N N +F + L L+HC ++SI A
Sbjct: 171 ISDLSTNLLRGLNSLRVLRLDRNPIPIEHINELFTDVSQLDELYLNHCNLSSIYSLALDR 230
Query: 159 LEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSD 218
+ L+ L + N+L+ VP + LR L L+++DLS N I +I +F N+ L LS
Sbjct: 231 IP-QLRQLGIGGNNLKMVPTKELRSLPQLSVLDLSHNSIQEITACAFCN-TNISKLDLSH 288
Query: 219 NNLTLYKNS 227
N L + K+S
Sbjct: 289 NLLGISKDS 297
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 144 (55.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 49/177 (27%), Positives = 89/177 (50%)
Query: 68 LNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN 127
L +H+ L+ L ++++ I + + F + +K L L+ R+ S+ P F
Sbjct: 137 LPEHLKEFQSLETLDLSSNNISEL-QTAFPALQLKYLYLNSNRVTSMEPGYF-------- 187
Query: 128 INENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
+N N + + L+L+ RI++I P F+ + L+HL L N ++ V T + L L
Sbjct: 188 --DNLANTLLV--LKLNRNRISAIPPKMFKLPQ--LQHLELNRNKIKNVDGLTFQGLGAL 241
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+ + +N + K+ D +F L+N+ L+L NNLT + K GL + L L +N+
Sbjct: 242 KSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNA 298
Score = 143 (55.4 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 50/188 (26%), Positives = 93/188 (49%)
Query: 75 KVP-LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAF---RHLDAIR--- 126
K+P L L +N + I+N++ TF G+ +K+L++ + + AF +++ ++
Sbjct: 213 KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDH 272
Query: 127 -NINENT----FNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
N+ E T + + ++ L LS IN I+P+A+ + L L+L N L ++ +
Sbjct: 273 NNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQ-KLSELDLTFNHLSRLDDSSF 331
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL--TL--YKNSFRGLELNNNL 237
L L + + N++ I D +F L++L TL L +N + T+ +F GL+ L
Sbjct: 332 LGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRL 391
Query: 238 TLYKNSFR 245
L N R
Sbjct: 392 ILQGNRIR 399
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/110 (33%), Positives = 62/110 (56%)
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK-NLTLIDLSKN 195
++ L LSH R++ I ++ HL+ +L+ + L N+LE +P L + N+TL+ L+ N
Sbjct: 75 WVARLDLSHNRLSFIKASSMSHLQ-SLREVKLNNNELETIP--NLGPVSANITLLSLAGN 131
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
+I +I + +L TL LS NN++ + +F L+L LY NS R
Sbjct: 132 RIVEILPEHLKEFQSLETLDLSSNNISELQTAFPALQLKY---LYLNSNR 178
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 140 (54.3 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+++ +++ F G+ + L L H I S+ NAF+ L +K L L N + Q+P T
Sbjct: 75 NSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLR-RVKELTLSSNKITQLPNNTF 133
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-----LYKN--SFRGLELN 234
R + NL +DLS N + + D F L L TL + N + ++++ S + L++
Sbjct: 134 RPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIG 193
Query: 235 -NNL-TLYKNSFRG 246
N L +L +NSF G
Sbjct: 194 YNQLKSLARNSFAG 207
Score = 131 (51.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 38/153 (24%), Positives = 77/153 (50%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN---------- 129
L + +++ +++ F G+ + L L H I S+ NAF+ L ++ +
Sbjct: 70 LSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLP 129
Query: 130 ENTFNGI-FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
NTF + ++++ LS+ + S+ P+ F L L L+++ N ++ VPV + ++L
Sbjct: 130 NNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLR-KLTTLHMRSNAIKFVPVRIFQDCRSLK 188
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+D+ N++ + +SF+ L L L L N+L
Sbjct: 189 FLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 59/203 (29%), Positives = 98/203 (48%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
EL++ N +T P T N + +DL Y NN ++++ + F+G+ + L H
Sbjct: 117 ELTLSSNKITQLP--NNTFRPMPNLR-SVDLSY-NN--LQSLEPDLFHGL--RKLTTLHM 168
Query: 110 RINSI--TP-------NAFRHLDA----IRNINENTFNGIF-IKNLQLSHCRINSITPNA 155
R N+I P + + LD ++++ N+F G+F + L L H + +
Sbjct: 169 RSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAH 228
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
F L +L L L+ N + V V TL + L +DLS N+I I F ++ +L +L+
Sbjct: 229 FPRL-ISLHSLCLRRNKVTIV-VNTLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQ 286
Query: 216 LSDNNLTLYKNSFRGLELNNNLT 238
L N LT Y +S R L+ +LT
Sbjct: 287 LDSNRLT-YIDS-RILDSWKSLT 307
>MGI|MGI:1202398 [details] [associations]
symbol:Kera "keratocan" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0061303
"cornea development in camera-type eye" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1202398 GO:GO:0005578
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 HOVERGEN:HBG108061 CTD:11081 KO:K08123
OrthoDB:EOG4KSPK3 OMA:RWINLNK EMBL:AF022256 EMBL:AF057301
IPI:IPI00985653 RefSeq:NP_032464.1 UniGene:Mm.6228
ProteinModelPortal:O35367 SMR:O35367 STRING:O35367
PhosphoSite:O35367 PRIDE:O35367 Ensembl:ENSMUST00000105286
GeneID:16545 KEGG:mmu:16545 eggNOG:NOG278287 InParanoid:O35367
NextBio:290011 Bgee:O35367 CleanEx:MM_KERA Genevestigator:O35367
GermOnline:ENSMUSG00000019932 Uniprot:O35367
Length = 351
Score = 137 (53.3 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 42/127 (33%), Positives = 67/127 (52%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I +I E F N ++ + L+ +I + I A L+ L L L++N+LE+VP
Sbjct: 84 IESIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLK-KLLFLFLEDNELEEVPSPLP 142
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL---TLYKNSFRGLELNNNLT 238
R L+ L L++NK+ +IP +FS L NL L L N L +++F+GL+ L
Sbjct: 143 RSLEQL---QLARNKVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLN 199
Query: 239 LYKNSFR 245
+ KN+ R
Sbjct: 200 MAKNALR 206
Score = 111 (44.1 bits), Expect = 0.00078, P = 0.00078
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 62 PLFKATLNKHVN-TKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR 120
P AT + +N K + I A+ + + F +F+++ +L + S P +
Sbjct: 91 PFENATQLRWINLNKNKITNYGIEKGALSQLKKLLF--LFLEDNELEE--VPSPLPRSLE 146
Query: 121 HLDAIRN----INENTFNGIFIKNLQLSHCRINSITPNAFRHLEF----TLKHLNLQEND 172
L RN I + TF+ + +NL L + N + NAF+ F L LN+ +N
Sbjct: 147 QLQLARNKVSRIPQGTFSNL--ENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLNMAKNA 204
Query: 173 LEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
L +P R N + L N I IP++ F+ + + L+L+ N L+ RG +
Sbjct: 205 LRNMPP---RLPANTMQLFLDNNSIEGIPENYFNVIPKVAFLRLNHNKLSDAGLPSRGFD 261
Query: 233 LNNNLTL 239
+++ L L
Sbjct: 262 VSSILDL 268
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 162 TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
T +HLNL EN +E V V++ R+L +L ++ L +N I +I +FS L NL TL+L DN L
Sbjct: 74 TTRHLNLMENAIESVQVDSFRNLHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRL 133
Query: 222 TL-------YKNSFRGLELNNN 236
T+ Y + R L L NN
Sbjct: 134 TVVPSGAFEYLSKLRELWLRNN 155
>MGI|MGI:107942 [details] [associations]
symbol:Epyc "epiphycan" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:107942 GO:GO:0005578
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 CTD:1833 HOGENOM:HOG000273909
HOVERGEN:HBG006850 KO:K08127 OMA:CDDHELD OrthoDB:EOG4RV2S6
InterPro:IPR027217 PANTHER:PTHR24371:SF4 eggNOG:NOG314832
EMBL:D78274 EMBL:D87187 EMBL:BC012695 EMBL:AK015223 IPI:IPI00136419
PIR:S72271 RefSeq:NP_031910.1 UniGene:Mm.148886
ProteinModelPortal:P70186 SMR:P70186 PhosphoSite:P70186
PRIDE:P70186 Ensembl:ENSMUST00000020094 Ensembl:ENSMUST00000105285
GeneID:13516 KEGG:mmu:13516 UCSC:uc007gxb.1 InParanoid:P70186
NextBio:284078 Bgee:P70186 CleanEx:MM_EPYC Genevestigator:P70186
GermOnline:ENSMUSG00000019936 Uniprot:P70186
Length = 322
Score = 136 (52.9 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 43/136 (31%), Positives = 75/136 (55%)
Query: 119 FRHLDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
+ + I+ IN+N F + +K + L+ I+ I +AFR L L+ L L++N ++Q+P
Sbjct: 149 YSRFNRIKKINKNDFASLNDLKRIDLTSNLISEIDEDAFRKLPH-LQELVLRDNKIKQLP 207
Query: 178 VETLRHLKN-LTLIDLSKNKIGK--IPDDSFSTLNNLVTLKLSDNNLTLYK----NSFRG 230
L N LT ID+S N++G+ I ++F + +L L ++DN+L S R
Sbjct: 208 -----ELPNTLTFIDISNNRLGRKGIKQEAFKDMYDLHHLYITDNSLDHIPLPLPESLRA 262
Query: 231 LELNNN--LTLYKNSF 244
L L NN L +++++F
Sbjct: 263 LHLQNNDILEMHEDTF 278
>ZFIN|ZDB-GENE-080327-24 [details] [associations]
symbol:prelp "proline/arginine-rich end leucine-rich
repeat protein" species:7955 "Danio rerio" [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-24 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 CTD:5549 KO:K08125
PANTHER:PTHR24371:SF15 EMBL:CU459075 IPI:IPI00864506
RefSeq:XP_001923590.1 UniGene:Dr.134237 ProteinModelPortal:F1QY29
Ensembl:ENSDART00000103846 GeneID:100144408 KEGG:dre:100144408
NextBio:20791438 Bgee:F1QY29 Uniprot:F1QY29
Length = 378
Score = 137 (53.3 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 50/189 (26%), Positives = 98/189 (51%)
Query: 67 TLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLD-- 123
++ K V K+P L LY+ + ++ + ++ G+ + L+LS +I+ I P AF ++
Sbjct: 142 SVEKQVFEKLPNLLYLYMQRNELKEVPDDLPAGL--EQLRLSRNQISKIPPGAFSKMEHL 199
Query: 124 AIRNINENTFN------GIF--IKNL---QLSHCRINSITPNAFRHLEFTLKHLNLQEND 172
A+ +++ N + IF +KNL L+H + + N + TL L L N+
Sbjct: 200 ALLDLHHNRISDSSMGKNIFKDLKNLIQLNLAHNILRKMPAN----IPNTLFQLFLDRNN 255
Query: 173 LEQVPVETLRHLKNLTLIDLSKNKIGK--IPDDSFSTLNNLVTLKLSDN---NLTLYKNS 227
+E++P + ++ +L + L+ N+I +P F+ +++L+ L L+ N N+ L+ +
Sbjct: 256 IEEIPQDYFKNFASLAFVRLNYNQISDKGLPKSVFN-VSSLLDLHLAHNKLSNVPLFNSE 314
Query: 228 FRGLELNNN 236
L LNNN
Sbjct: 315 LEQLHLNNN 323
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/154 (29%), Positives = 73/154 (47%)
Query: 97 NGIFIKNLQLSHCRINSI-TPNAFRHLDAIRNINENTF-NGIFIKNLQLSHCRINSITPN 154
N ++ +N L I T + + I + +F N +K + L + RI S+
Sbjct: 87 NALYCENRNLRKVPIIPFRTHYLYLQNNYIDQVTAESFKNCTELKWINLGNNRIRSVEKQ 146
Query: 155 AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTL 214
F L L +L +Q N+L++VP + L+ L L S+N+I KIP +FS + +L L
Sbjct: 147 VFEKLP-NLLYLYMQRNELKEVPDDLPAGLEQLRL---SRNQISKIPPGAFSKMEHLALL 202
Query: 215 KLSDNNLT---LYKNSFRGLELNNNLTLYKNSFR 245
L N ++ + KN F+ L+ L L N R
Sbjct: 203 DLHHNRISDSSMGKNIFKDLKNLIQLNLAHNILR 236
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 138 (53.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 62/241 (25%), Positives = 104/241 (43%)
Query: 6 SPFHLVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANE-LSIQCNDLT-NYPL 63
S F L +LL L+ G CP E ++ + E +S+ C L+ Y
Sbjct: 11 SCFLLHASVLL--LLSKGERMCPVSCRCEGKIVYCESGGFQDVPENISLGCQGLSLRYNS 68
Query: 64 FKATLN---KHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF 119
L H+N V LY+++++I ++ F G+ +K L LS +I + F
Sbjct: 69 LLLLLPYQFAHLNQLV---WLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTF 125
Query: 120 RHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
+ + N+ +NL LS+ ++ + P F L L++L+L+ N++ +PV
Sbjct: 126 ---ETVPNL----------RNLDLSYNQMQDLVPGHFHGLR-KLQNLHLRSNNIRSIPVR 171
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTL 239
T ++L +DL N++ I +F L L L L N + N F L N L
Sbjct: 172 TFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRI-NFFLFPRLLNLQAL 230
Query: 240 Y 240
Y
Sbjct: 231 Y 231
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 126 RNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+++ EN G + L L + + + P F HL L L L N + V + L+
Sbjct: 49 QDVPENISLGC--QGLSLRYNSLLLLLPYQFAHLN-QLVWLYLDHNSISTVDRLAFQGLR 105
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSF 244
L + LS NKI ++ + +F T+ NL L LS N + L F GL NL L N+
Sbjct: 106 RLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNI 165
Query: 245 R 245
R
Sbjct: 166 R 166
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 81 LYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFNGIF 137
L ++++ I + TF + ++NL LS+ ++ + P F L ++N++ N I
Sbjct: 110 LILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIP 169
Query: 138 IKN---------LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
++ L L + R+ +IT F L L L+L+ N ++ L NL
Sbjct: 170 VRTFMECRSLEFLDLGYNRLRTITRTTFLGL-LRLTELHLEHNQFSRINFFLFPRLLNLQ 228
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNLTLYKN 242
+ L N+I + S T + L L LS N + + + FR L + L L N
Sbjct: 229 ALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESN 283
>FB|FBgn0263289 [details] [associations]
symbol:scrib "scribbled" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0006963 "positive regulation of antibacterial peptide
biosynthetic process" evidence=IMP] [GO:0005918 "septate junction"
evidence=NAS;IDA;TAS] [GO:0016335 "morphogenesis of larval imaginal
disc epithelium" evidence=IMP] [GO:0016336 "establishment or
maintenance of polarity of larval imaginal disc epithelium"
evidence=IMP] [GO:0016333 "morphogenesis of follicular epithelium"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016327 "apicolateral plasma membrane" evidence=IDA]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0016332
"establishment or maintenance of polarity of embryonic epithelium"
evidence=TAS] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=TAS] [GO:0016334 "establishment or maintenance of polarity
of follicular epithelium" evidence=IMP] [GO:0045197 "establishment
or maintenance of epithelial cell apical/basal polarity"
evidence=NAS;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007391 "dorsal closure" evidence=IMP;TAS] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0007280 "pole cell migration" evidence=NAS] [GO:0008406 "gonad
development" evidence=NAS] [GO:0008105 "asymmetric protein
localization" evidence=IMP;TAS] [GO:0008285 "negative regulation of
cell proliferation" evidence=TAS] [GO:0051726 "regulation of cell
cycle" evidence=NAS] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=TAS] [GO:0016323 "basolateral plasma membrane"
evidence=IDA;TAS] [GO:0035088 "establishment or maintenance of
apical/basal cell polarity" evidence=IMP] [GO:0019991 "septate
junction assembly" evidence=IMP] [GO:0045186 "zonula adherens
assembly" evidence=IMP] [GO:0045571 "negative regulation of
imaginal disc growth" evidence=IMP] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0007472 "wing disc morphogenesis"
evidence=IMP] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IMP] [GO:0022402 "cell cycle
process" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0030100 "regulation of endocytosis" evidence=IMP]
[GO:0072002 "Malpighian tubule development" evidence=IMP]
[GO:0001737 "establishment of imaginal disc-derived wing hair
orientation" evidence=IMP] [GO:0042067 "establishment of ommatidial
planar polarity" evidence=IMP] [GO:0007464 "R3/R4 cell fate
commitment" evidence=IMP] [GO:0072089 "stem cell proliferation"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0045169 "fusome" evidence=IDA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
EMBL:AE014297 GO:GO:0001708 GO:GO:0005576 GO:GO:0005918
GO:GO:0007391 GO:GO:0019991 GO:GO:0007464 eggNOG:COG4886
GO:GO:0048863 GO:GO:0005179 GO:GO:0031594 GO:GO:0050803
GO:GO:0016323 GO:GO:0000122 GO:GO:0051726 GO:GO:0030100
GO:GO:0005923 GO:GO:0007608 GO:GO:0000902 GO:GO:0042048
SUPFAM:SSF50156 GO:GO:0016328 InterPro:IPR025875 Pfam:PF12799
GO:GO:0050680 GO:GO:0007318 GO:GO:0060581 GO:GO:0016327
GO:GO:0045186 GO:GO:0045823 GO:GO:0045169 GO:GO:0042058
GO:GO:0001737 GO:GO:0045198 GO:GO:0072089 GO:GO:0016332
GO:GO:0022402 GO:GO:0008593 GO:GO:0030714 GO:GO:0016336
GO:GO:0046425 GO:GO:0045571 ChiTaRS:scrib
GeneTree:ENSGT00650000093182 EMBL:AF190774 EMBL:AJ252084
EMBL:AJ271647 EMBL:AY167903 EMBL:AY167904 EMBL:AY167905
EMBL:AY167906 EMBL:AY069661 EMBL:BT015240 EMBL:AY060469
RefSeq:NP_001014669.1 RefSeq:NP_001014670.2 RefSeq:NP_001036761.3
RefSeq:NP_001247318.1 RefSeq:NP_524754.2 RefSeq:NP_733154.1
RefSeq:NP_733155.2 RefSeq:NP_733156.1 ProteinModelPortal:Q7KRY7
SMR:Q7KRY7 MINT:MINT-1327318 STRING:Q7KRY7 PaxDb:Q7KRY7
PRIDE:Q7KRY7 EnsemblMetazoa:FBtr0308625 GeneID:44448
KEGG:dme:Dmel_CG43398 CTD:23513 FlyBase:FBgn0263289
InParanoid:Q7KRY7 KO:K16175 OrthoDB:EOG4K0P38 GenomeRNAi:44448
NextBio:837278 Bgee:Q7KRY7 GermOnline:CG5462 GO:GO:0072002
Uniprot:Q7KRY7
Length = 1851
Score = 145 (56.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 42/123 (34%), Positives = 66/123 (53%)
Query: 122 LDA--IRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
LDA IR++ +N F ++ L LS I + P+ ++ E L L++ ND+ +P +
Sbjct: 44 LDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPD-IQNFE-NLVELDVSRNDIPDIP-D 100
Query: 180 TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTL 239
++HL++L + D S N I K+P FS L NL L L+D +LT F L +L L
Sbjct: 101 DIKHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLEL 159
Query: 240 YKN 242
+N
Sbjct: 160 REN 162
>DICTYBASE|DDB_G0276371 [details] [associations]
symbol:gefL "Ras guanine nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0046956 "positive phototaxis"
evidence=IMP] [GO:0043052 "thermotaxis" evidence=IMP] [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0030036 "actin cytoskeleton organization"
evidence=IEA] [GO:0017048 "Rho GTPase binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000651 InterPro:IPR001895
InterPro:IPR010473 InterPro:IPR016024 Pfam:PF00617 Pfam:PF00618
Pfam:PF06371 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50212
PROSITE:PS51450 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0276371
GO:GO:0007264 SUPFAM:SSF48371 GO:GO:0030036 InterPro:IPR003591
SMART:SM00369 GO:GO:0051056 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0030587 GO:GO:0005622 GO:GO:0005085
GO:GO:0046956 Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
InterPro:IPR014768 PROSITE:PS51232 eggNOG:KOG3417 GO:GO:0043052
EMBL:AY160101 RefSeq:XP_643190.2 ProteinModelPortal:B0M0P8
STRING:B0M0P8 EnsemblProtists:DDB0185197 GeneID:8620463
KEGG:ddi:DDB_G0276371 Uniprot:B0M0P8
Length = 2356
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 54/197 (27%), Positives = 95/197 (48%)
Query: 46 NTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQ 105
N + + + LT L + N+ + T +P+ L + + ++EN F+ F +L
Sbjct: 103 NDIAKFQVSISKLTTLRLLDLSGNQ-LGT-IPVRLFSLVSMRELYLDENQFSN-FPSHL- 158
Query: 106 LSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKH 165
C + +T F + + +++I I +K L LS ++ SI P +L+ +L H
Sbjct: 159 ---CELQKLTTLGFSN-NLLKSIPTQIGQMIGLKKLILSGNQMESI-PMEISNLK-SLTH 212
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L+ N L +P E L L+ + L NK+ IPD+ +LV+L+L++N++TL
Sbjct: 213 LDCSSNILSSIPNELGNKLSQLSFLFLQHNKLRSIPDE-IGQCQSLVSLRLNNNSITLLP 271
Query: 226 NSFRGLELNNNLTLYKN 242
S LE L L +N
Sbjct: 272 QSIGELENLQELYLQEN 288
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 136 (52.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 61/229 (26%), Positives = 101/229 (44%)
Query: 39 STCICSYNTANELSIQCNDLTNYPLFKA--TL---NKHVN-TKVPLDLLYINNSAIRNIN 92
+ C+ ++++N SI C +P + T+ + N T++P D+L I N+
Sbjct: 41 NACLV-FHSSNGSSISCQPPAKFPHYLPADTIYLATEFFNLTQMPADIL----QGIPNLQ 95
Query: 93 ENTFNGIFIKNLQLSHCRINSITP-NAFRHLDAIRNINENTFNGIF-----IKNLQLSHC 146
E + + N QL + P + LD RN + G+F + L L
Sbjct: 96 E-----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKEN 150
Query: 147 RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFS 206
R++ + + R L+ L+HL+L N L +P + L + +L ++DL N++ +P D
Sbjct: 151 RLDILDASWLRGLK-ALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 209
Query: 207 TLNNLVTLKLSDNNLTLYKNSF-------RGLELNNN--LTLYKNSFRG 246
L L L N L + + F R L LNNN TL +FRG
Sbjct: 210 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 258
>UNIPROTKB|E2R423 [details] [associations]
symbol:KERA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061303 "cornea development in camera-type
eye" evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 CTD:11081 KO:K08123 OMA:RWINLNK
EMBL:AAEX03009927 RefSeq:XP_852485.1 Ensembl:ENSCAFT00000009924
GeneID:482598 KEGG:cfa:482598 NextBio:20857165 Uniprot:E2R423
Length = 350
Score = 136 (52.9 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I I E F N ++ + L+ +I + I A L+ L L L++N+LE+VP
Sbjct: 83 IETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLK-KLLFLFLEDNELEEVPSPLP 141
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL---TLYKNSFRGLELNNNLT 238
R L+ L L++NK+ +IP +FS L NL L L N L +++F+GL+ L
Sbjct: 142 RSLEQL---QLARNKVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLN 198
Query: 239 LYKNSFR 245
+ KN+ R
Sbjct: 199 MAKNALR 205
>UNIPROTKB|C9JPM9 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00917222
ProteinModelPortal:C9JPM9 SMR:C9JPM9 STRING:C9JPM9
Ensembl:ENST00000452811 HOGENOM:HOG000185833 ArrayExpress:C9JPM9
Bgee:C9JPM9 Uniprot:C9JPM9
Length = 183
Score = 126 (49.4 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+++ + F G+ + L L H I S+ +AF+ L +K L L N + Q+P T
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLR-RVKELTLSSNQITQLPNTTF 133
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
R + NL +DLS NK+ + D F L L TL + N
Sbjct: 134 RPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRAN 171
>UNIPROTKB|O62702 [details] [associations]
symbol:KERA "Keratocan" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 EMBL:U48360 EMBL:AF036962 EMBL:BC120375
IPI:IPI00691502 RefSeq:NP_776335.1 UniGene:Bt.5391
ProteinModelPortal:O62702 STRING:O62702 PRIDE:O62702
Ensembl:ENSBTAT00000019066 GeneID:280785 KEGG:bta:280785 CTD:11081
InParanoid:O62702 KO:K08123 OrthoDB:EOG4KSPK3 NextBio:20804946
Uniprot:O62702
Length = 352
Score = 136 (52.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I I E F N ++ + L+ +I + I A L+ L L L++N+LE+VP
Sbjct: 83 IETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLK-KLLFLFLEDNELEEVPSPLP 141
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL---TLYKNSFRGLELNNNLT 238
R L+ L L++NK+ +IP +FS L NL L L N L +++F+GL+ L
Sbjct: 142 RSLEQL---QLARNKVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLN 198
Query: 239 LYKNSFR 245
+ KN+ R
Sbjct: 199 MAKNALR 205
>UNIPROTKB|F1SQ08 [details] [associations]
symbol:KERA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0061303
GeneTree:ENSGT00600000084286 KO:K08123 OMA:RWINLNK EMBL:CU468030
RefSeq:XP_001927163.2 UniGene:Ssc.12936 ProteinModelPortal:F1SQ08
Ensembl:ENSSSCT00000001001 GeneID:100157843 KEGG:ssc:100157843
ArrayExpress:F1SQ08 Uniprot:F1SQ08
Length = 353
Score = 136 (52.9 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
I I E F N ++ + L+ +I + I A L+ L L L++N+LE+VP
Sbjct: 83 IETIPEKPFENATQLRWINLNKNKITNYGIEKGALSQLK-KLLFLFLEDNELEEVPSPLP 141
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL---TLYKNSFRGLELNNNLT 238
R L+ L L++NK+ +IP +FS L NL L L N L +++F+GL+ L
Sbjct: 142 RSLEQL---QLARNKVSRIPQGTFSNLENLTLLDLQHNKLLDNAFQRDTFKGLKNLMQLN 198
Query: 239 LYKNSFR 245
+ KN+ R
Sbjct: 199 MAKNALR 205
>UNIPROTKB|Q90944 [details] [associations]
symbol:EPYC "Epiphycan" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 CTD:1833 HOGENOM:HOG000273909
HOVERGEN:HBG006850 KO:K08127 OMA:CDDHELD OrthoDB:EOG4RV2S6
InterPro:IPR027217 PANTHER:PTHR24371:SF4 EMBL:D10485
IPI:IPI00586684 PIR:A41781 RefSeq:NP_001004382.1 UniGene:Gga.3583
ProteinModelPortal:Q90944 Ensembl:ENSGALT00000018390 GeneID:417890
KEGG:gga:417890 eggNOG:NOG314832 InParanoid:Q90944 NextBio:20821126
Uniprot:Q90944
Length = 316
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 44/135 (32%), Positives = 75/135 (55%)
Query: 119 FRHLDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
+ + IR IN+N F + +K + L+ I+ I +AFR L L+ L L++N + Q+P
Sbjct: 143 YSRYNRIRKINKNDFANLNNLKRIDLTANLISEIHEDAFRRLPQLLE-LVLRDNRIRQLP 201
Query: 178 VETLRHLKNLTLIDLSKNKIGK--IPDDSFSTLNNLVTLKLSDNNLTLYK----NSFRGL 231
LTLID+S N++G+ I +++F L+ L L ++DNNL S + L
Sbjct: 202 ELP----STLTLIDISNNRLGRKGIRNEAFKDLHELQHLYITDNNLDHVPLPLPESLQAL 257
Query: 232 EL-NNNLT-LYKNSF 244
L NNN+ +++++F
Sbjct: 258 HLQNNNIQEMHEDTF 272
>MGI|MGI:2176882 [details] [associations]
symbol:Tlr7 "toll-like receptor 7" species:10090 "Mus
musculus" [GO:0002224 "toll-like receptor signaling pathway"
evidence=ISO] [GO:0002282 "microglial cell activation involved in
immune response" evidence=ISO] [GO:0002755 "MyD88-dependent
toll-like receptor signaling pathway" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=IMP] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005764 "lysosome" evidence=IDA] [GO:0005768
"endosome" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0006955
"immune response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=ISO]
[GO:0008144 "drug binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0032009 "early
phagosome" evidence=IDA] [GO:0032722 "positive regulation of
chemokine production" evidence=ISO] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0032757
"positive regulation of interleukin-8 production" evidence=ISO]
[GO:0034154 "toll-like receptor 7 signaling pathway" evidence=IMP]
[GO:0035197 "siRNA binding" evidence=IMP] [GO:0042221 "response to
chemical stimulus" evidence=ISO] [GO:0042346 "positive regulation
of NF-kappaB import into nucleus" evidence=ISO] [GO:0045078
"positive regulation of interferon-gamma biosynthetic process"
evidence=ISO] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO;IMP] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO] [GO:0045416
"positive regulation of interleukin-8 biosynthetic process"
evidence=ISO] [GO:0051607 "defense response to virus"
evidence=ISO;IMP] [GO:0052033 "pathogen-associated molecular
pattern dependent induction by symbiont of host innate immune
response" evidence=ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR026880 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 MGI:MGI:2176882 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 GO:GO:0005789 GO:GO:0008144 GO:GO:0005768
GO:GO:0006954 GO:GO:0003727 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0032722 GO:GO:0032755 GO:GO:0042221 GO:GO:0005764
GO:GO:0051607 GO:GO:0032009 GO:GO:0003725 GO:GO:0032757
GO:GO:0071260 GO:GO:0035197 InterPro:IPR000372 SMART:SM00013
GO:GO:0045416 GO:GO:0052033 GO:GO:0042346 GO:GO:0045078
GO:GO:0002282 GO:GO:0007252 SUPFAM:SSF52200 GO:GO:0034154
GO:GO:0045359 GO:GO:0045356 CTD:51284 HOGENOM:HOG000230468
HOVERGEN:HBG018601 KO:K05404 OrthoDB:EOG4BCDM5
PANTHER:PTHR24365:SF1 EMBL:AY035889 IPI:IPI00122181
RefSeq:NP_573474.1 UniGene:Mm.23979 ProteinModelPortal:P58681
SMR:P58681 STRING:P58681 PhosphoSite:P58681 PRIDE:P58681
Ensembl:ENSMUST00000060719 Ensembl:ENSMUST00000112161
Ensembl:ENSMUST00000112164 GeneID:170743 KEGG:mmu:170743
InParanoid:P58681 ChEMBL:CHEMBL6085 NextBio:370306 Bgee:P58681
CleanEx:MM_TLR7 Genevestigator:P58681 GermOnline:ENSMUSG00000044583
Uniprot:P58681
Length = 1050
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 63/218 (28%), Positives = 109/218 (50%)
Query: 45 YNTA-NEL-SIQCNDLT-NYPLFKATLNKHV-NTKVPLDLLYINNSAIRNINENTFNGIF 100
Y+TA EL S++ DL+ N F+A H+ N L LL + + +N+N +
Sbjct: 559 YSTAFEELQSLEVLDLSSNSHYFQAEGITHMLNFTKKLRLL---DKLM--MNDNDISTSA 613
Query: 101 IKNLQLSHCRINSITPNAFRHLDAIRNINENT----FNGIF-IKNLQLSHCRINSITPNA 155
+ ++ RI N HLD + +N F +F ++ L +S +NS+ P
Sbjct: 614 SRTMESDSLRILEFRGN---HLDVLWRAGDNRYLDFFKNLFNLEVLDISRNSLNSLPPEV 670
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
F + LK+L+L +N L+ + L+ LK+L ++DLS N++ K+P+ + +L TL
Sbjct: 671 FEGMPPNLKNLSLAKNGLKSFFWDRLQLLKHLEILDLSHNQLTKVPERLANCSKSLTTLI 730
Query: 216 LSDNN---LTLY--KNSF--RGLELNNNL--TLYKNSF 244
L N LT Y +++ R L++++N + K SF
Sbjct: 731 LKHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKTSF 768
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/215 (27%), Positives = 99/215 (46%)
Query: 42 ICSYNTANELSIQCNDLTNYP--------LFKATLNKHVNTKVPLDLLYINNSAIRNINE 93
I S L +Q N+LT P L L+ + VP D +++ N++
Sbjct: 147 ITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSS 206
Query: 94 NTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI-FIKNLQLSHCRINS-- 150
N +KNL R+ + +HLD N+ E + +++L+L + R N
Sbjct: 207 NQ-----LKNLPAEISRMKRL-----KHLDCDANLLETVPPDVGSMESLELLYLRRNKLR 256
Query: 151 ITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNN 210
+ P F LK L+L EN +E++ E L+HL+ + ++DL NK+ +P++ + L +
Sbjct: 257 VLPE-FPSCR-QLKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEE-MALLQS 313
Query: 211 LVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNSFR 245
L L LS+N+++ S L L L L N R
Sbjct: 314 LERLDLSNNDISSLPCSLGNLHLKF-LALEGNPLR 347
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/195 (29%), Positives = 92/195 (47%)
Query: 57 DLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI---FIKNLQLSHCRINS 113
DL++ L L + + +LL NN I ++ F+ + +K L+LS +I
Sbjct: 154 DLSHNGLSSTKLGTQLQLENLQELLLSNNK-ISSLTPEEFDFLGNSSLKRLELSSNQIKE 212
Query: 114 ITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFT-LKHLNLQEND 172
+P F L + +G+ + N +LS S+T L T +++L+L N
Sbjct: 213 FSPGCFHTLGEL--------SGLSLNNAKLSP----SLTEKLCLELSNTSIENLSLSSNQ 260
Query: 173 LEQVPVETLRHLK--NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR 229
L+ + T LK NLT +DLS+N + + +DSF+ L +L L L NN+ L SF
Sbjct: 261 LDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFY 320
Query: 230 GLELNNNLTLYKNSF 244
GL L L + SF
Sbjct: 321 GLSNLRRLDL-RRSF 334
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 148 INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
I+ + P + L + L+ LNLQ N++ Q+ +T NLT + L N I KI +D F
Sbjct: 88 ISKLEPELCQSLPW-LEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKN 146
Query: 208 LNNLVTLKLSDNNLTLYKNSFRGLELNN 235
L NL+ L LS N L+ K + L+L N
Sbjct: 147 LKNLIKLDLSHNGLSSTKLGTQ-LQLEN 173
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/195 (29%), Positives = 92/195 (47%)
Query: 57 DLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI---FIKNLQLSHCRINS 113
DL++ L L + + +LL NN I ++ F+ + +K L+LS +I
Sbjct: 154 DLSHNGLSSTKLGTQLQLENLQELLLSNNK-ISSLTPGEFDFLGNSSLKRLELSSNQIKE 212
Query: 114 ITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFT-LKHLNLQEND 172
+P F L + +G+ + N +LS S+T L T +++L+L N
Sbjct: 213 FSPGCFHTLGEL--------SGLSLNNAKLSP----SLTEKLCLELSNTSIENLSLSSNQ 260
Query: 173 LEQVPVETLRHLK--NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR 229
L+ + T LK NLT +DLS+N + + +DSF+ L +L L L NN+ L SF
Sbjct: 261 LDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFY 320
Query: 230 GLELNNNLTLYKNSF 244
GL L L + SF
Sbjct: 321 GLSNLRRLDL-RRSF 334
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 148 INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
I+ + P + L + L+ LNLQ N++ Q+ +T NLT + L N I KI +D F
Sbjct: 88 ISKLEPELCQSLPW-LEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKN 146
Query: 208 LNNLVTLKLSDNNLTLYKNSFRGLELNN 235
L NL+ L LS N L+ K + L+L N
Sbjct: 147 LKNLIKLDLSHNGLSSTKLGTQ-LQLEN 173
>UNIPROTKB|E1BI02 [details] [associations]
symbol:FMOD "Fibromodulin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF11
EMBL:DAAA02041894 IPI:IPI00907454 Ensembl:ENSBTAT00000056352
ArrayExpress:E1BI02 Uniprot:E1BI02
Length = 375
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/194 (26%), Positives = 92/194 (47%)
Query: 54 QCNDLTNYPLFKATLNKHVNTK--VP--LDLLYINNSAIRNINENTFNG------IFIKN 103
+C+ N+P N+++ VP + +Y N+ I +I E F+ I +
Sbjct: 78 ECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISSIQEGVFDNATGLLWIALHG 137
Query: 104 LQLSHCRINSITPNAFRHLDAIRNINENTFNGI------FIKNLQLSHCRINSITPNAFR 157
Q++ ++ + RHL+ + ++ N I ++ L L H +I+ + NA
Sbjct: 138 NQITSDKVGKKVFSKLRHLERLY-LDHNNLTRIPSPLPRSLRELHLDHNQISRVPNNALE 196
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
LE L L L N++++V +++ L++L L+DLS N + K+PD S L L L
Sbjct: 197 GLE-NLTALYLHHNEIQEVG-SSMKGLRSLILLDLSYNHLRKVPDGLPSALEQLY---LE 251
Query: 218 DNNLTLYKNS-FRG 230
NN+ +S FRG
Sbjct: 252 HNNVFSVPDSYFRG 265
>UNIPROTKB|P13605 [details] [associations]
symbol:FMOD "Fibromodulin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450 GO:GO:0005615
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:X16485
EMBL:BT030742 EMBL:BC104615 IPI:IPI00712366 PIR:S05390
RefSeq:NP_776483.1 UniGene:Bt.36593 ProteinModelPortal:P13605
IntAct:P13605 STRING:P13605 PRIDE:P13605 Ensembl:ENSBTAT00000019854
GeneID:281168 KEGG:bta:281168 CTD:2331 GeneTree:ENSGT00600000084286
HOGENOM:HOG000234447 HOVERGEN:HBG108061 InParanoid:P13605 KO:K08121
OMA:AQYDEDP OrthoDB:EOG4CJVHR NextBio:20805228 ArrayExpress:P13605
PANTHER:PTHR24371:SF11 Uniprot:P13605
Length = 376
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/194 (26%), Positives = 92/194 (47%)
Query: 54 QCNDLTNYPLFKATLNKHVNTK--VP--LDLLYINNSAIRNINENTFNG------IFIKN 103
+C+ N+P N+++ VP + +Y N+ I +I E F+ I +
Sbjct: 79 ECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISSIQEGVFDNATGLLWIALHG 138
Query: 104 LQLSHCRINSITPNAFRHLDAIRNINENTFNGI------FIKNLQLSHCRINSITPNAFR 157
Q++ ++ + RHL+ + ++ N I ++ L L H +I+ + NA
Sbjct: 139 NQITSDKVGKKVFSKLRHLERLY-LDHNNLTRIPSPLPRSLRELHLDHNQISRVPNNALE 197
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
LE L L L N++++V +++ L++L L+DLS N + K+PD S L L L
Sbjct: 198 GLE-NLTALYLHHNEIQEVG-SSMKGLRSLILLDLSYNHLRKVPDGLPSALEQLY---LE 252
Query: 218 DNNLTLYKNS-FRG 230
NN+ +S FRG
Sbjct: 253 HNNVFSVPDSYFRG 266
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/164 (29%), Positives = 81/164 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++++ I + E+ F G++ +K L LS +I + F L IN
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL-----IN------- 134
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++NL LS +++S+ P F L L+ L+L+ N L +PV ++L +DLS N+
Sbjct: 135 -LQNLDLSFNQLSSLHPELFYGLR-KLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNR 192
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY 240
+ + + F+ L L L L N LT N L L++ TL+
Sbjct: 193 LRSLARNGFAGLIKLRELHLEHNQLTKI-NFAHFLRLSSLHTLF 235
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/164 (29%), Positives = 81/164 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++++ I + E+ F G++ +K L LS +I + F L IN
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL-----IN------- 134
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++NL LS +++S+ P F L L+ L+L+ N L +PV ++L +DLS N+
Sbjct: 135 -LQNLDLSFNQLSSLHPELFYGLR-KLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNR 192
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY 240
+ + + F+ L L L L N LT N L L++ TL+
Sbjct: 193 LRSLARNGFAGLIKLRELHLEHNQLTKI-NFAHFLRLSSLHTLF 235
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/164 (29%), Positives = 81/164 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++++ I + E+ F G++ +K L LS +I + F L IN
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL-----IN------- 134
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++NL LS +++S+ P F L L+ L+L+ N L +PV ++L +DLS N+
Sbjct: 135 -LQNLDLSFNQLSSLHPELFYGLR-KLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNR 192
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY 240
+ + + F+ L L L L N LT N L L++ TL+
Sbjct: 193 LRSLARNGFAGLIKLRELHLEHNQLTKI-NFAHFLRLSSLHTLF 235
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/164 (29%), Positives = 81/164 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++++ I + E+ F G++ +K L LS +I + F L IN
Sbjct: 87 LTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQL-----IN------- 134
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++NL LS +++S+ P F L L+ L+L+ N L +PV ++L +DLS N+
Sbjct: 135 -LQNLDLSFNQLSSLHPELFYGLR-KLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNR 192
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY 240
+ + + F+ L L L L N LT N L L++ TL+
Sbjct: 193 LRSLARNGFAGLIKLRELHLEHNQLTKI-NFAHFLRLSSLHTLF 235
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/183 (28%), Positives = 88/183 (48%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN------ENTF 133
L + + I + E F G+ + L L H I + +AF L I+ ++ E+
Sbjct: 72 LSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLP 131
Query: 134 NGIF--IKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
NG F + NL+ LS+ R+ S+ P+ F L L +L+L+ N L+ +PV + +++
Sbjct: 132 NGTFRPLPNLRILDLSYNRLQSLEPDLFHGLR-KLTNLHLRYNALKFIPVRIFQDCRSMQ 190
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN-----NLTLYKN--SFRGLELNNN-LTLY 240
+DL N++ + +SF+ L L L L N NL + S R L + NN T+
Sbjct: 191 FLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIV 250
Query: 241 KNS 243
N+
Sbjct: 251 VNT 253
Score = 134 (52.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 44/132 (33%), Positives = 66/132 (50%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I + E F G+ + L L H I + +AF L +K L+L N +E +P T R
Sbjct: 79 ISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLR-RIKELDLSTNRIESLPNGTFRP 137
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-----LYKN--SFRGLELN-N 235
L NL ++DLS N++ + D F L L L L N L ++++ S + L+L N
Sbjct: 138 LPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYN 197
Query: 236 NL-TLYKNSFRG 246
L +L +NSF G
Sbjct: 198 QLQSLARNSFAG 209
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 122 LDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
L+ I++I F+ ++ + LS+ +I I P+AF+ L +L L L N + +P
Sbjct: 204 LNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPRGV 262
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL 239
L L L+ L+ NKI I D+F L NL L L DN + +L K +F L L L
Sbjct: 263 FGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 322
Query: 240 YKNSF 244
+N F
Sbjct: 323 AQNPF 327
Score = 120 (47.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+K + LS+ +++ I F ++ L+L N LE V R L L + L N+I
Sbjct: 453 LKKINLSNNKVSEIEDGTFEGAT-SVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRI 511
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNSF 244
I +DSF+ L N+ L L DN++T + +F L+ + L L N F
Sbjct: 512 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPF 559
Score = 100 (40.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L N VP + L K L L+DLS NKI + + SF+ ++ L TL LS N L
Sbjct: 652 LYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 710
Query: 226 N-SFRGLELNNNLTLYKN 242
+F+GL L+L+ N
Sbjct: 711 PLAFQGLRSLRLLSLHGN 728
Score = 100 (40.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
CR +T +L T+ + L+ N ++ +P + L IDLS N+I +I D+F
Sbjct: 181 CRGKGLTAIP-ANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAF 239
Query: 206 STLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
L +L +L L N +T L + F GL L L N
Sbjct: 240 QGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNAN 277
Score = 89 (36.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 47 TANELSIQCNDLTNYPLFKAT-LNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNL 104
+ EL + N+++ + +AT L K ++ L + ++N+ + I + TF G + L
Sbjct: 427 STTELRLNNNEIS---ILEATGLFKKLSH---LKKINLSNNKVSEIEDGTFEGATSVSEL 480
Query: 105 QLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSITP 153
L+ ++ S+ FR LD +R I+ ++F G+ ++ L L I +I+P
Sbjct: 481 HLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 540
Query: 154 NAFRHLEFTLKHLNLQEN 171
AF L+ L LNL N
Sbjct: 541 GAFDTLQ-ALSTLNLLAN 557
Score = 70 (29.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + N+ I I+ ++F G+ ++ L L I +I+P AF L A+ +N N FN
Sbjct: 501 LRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 560
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 68 LNKHVNTKVPLDLLYINNSAIR--NINENTFNGI----F-----IKNLQLSHCRINSITP 116
LN++ +P +LL+ NN A+ +++EN+ + F +KNLQL +I+ I
Sbjct: 2 LNRNQLQVLP-ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE 60
Query: 117 NAFRHLDAIRNINENTFNGIFIKNLQLS 144
AFR A+R + T N I + +S
Sbjct: 61 GAFR---ALRGLEVLTLNNNNITTIPVS 85
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 49 NELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLS 107
N ++ DL+ L +A K L L ++ + I I E F + ++ L L+
Sbjct: 17 NNQALSRLDLSENSL-QAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLN 75
Query: 108 HCRINSITPNAFRHLDAIRNINENTFNGIF 137
+ I +I ++F H+ +R ++ N +F
Sbjct: 76 NNNITTIPVSSFNHMPKLRTFRLHS-NHLF 104
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 74/264 (28%), Positives = 116/264 (43%)
Query: 5 FSPFHLVTLILLTALIQGG--SAQ-CPWEDESESELQSTCICSYNTANEL--SIQCND-L 58
F P LV L+ L L+ G AQ CP ++ S IC ++ I N L
Sbjct: 23 FDPL-LVVLLALQLLVVAGLVRAQTCPSVCSCSNQF-SKVICVRKNLRDVPDGISTNTRL 80
Query: 59 TNY-----PLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
N + K KH+ L++L ++ + IR I FNG+ + L+L R+
Sbjct: 81 LNLHENQIQIIKVNSFKHLRH---LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT 137
Query: 113 SITPNAFRHLDAI-----RN-----INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLE 160
+I AF +L + RN I FN I ++ L L R++ I+ AF L
Sbjct: 138 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 197
Query: 161 FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNN 220
L++LNL +L ++P L L L +DLS N + I SF L +L L + +
Sbjct: 198 -NLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 254
Query: 221 L-TLYKNSFRGLELNNNLTLYKNS 243
+ + +N+F L+ + L N+
Sbjct: 255 IQVIERNAFDNLQSLVEINLAHNN 278
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + V++ +HL++L ++ LSKN I I +F+ L NL TL+L DN LT
Sbjct: 80 RYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTT 139
Query: 224 YKN-SFRGLELNNNLTLYKN 242
N +F L L L N
Sbjct: 140 IPNGAFEYLSKLKELWLRNN 159
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/180 (28%), Positives = 89/180 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAI-----RN---- 127
L++L ++ + IRNI FNG+ + L+L R+ +I AF +L + RN
Sbjct: 103 LEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIE 162
Query: 128 -INENTFNGI-FIKNLQLSHC-RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
I FN + ++ L L R++ I+ AF L L++LNL +L+++P L L
Sbjct: 163 SIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLS-NLRYLNLGMCNLKEIP--NLIPL 219
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
L +++S N++ I SF L +L L + + T+ +N+F L+ L L N+
Sbjct: 220 VRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNN 279
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/176 (26%), Positives = 87/176 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNL-QLSHCRINSITPNAFRHLDAIR--NINENTFN 134
L L ++++ ++ ++ NG+++ +L L + + + P+AFR+ A++ N+N N
Sbjct: 450 LHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLK 509
Query: 135 GIFIKNLQLSHCRI-----NSIT---PNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
+ + + H R N IT +AF+ L L L L N LE + + T R L N
Sbjct: 510 TVPLALRNMRHLRTVDLGENMITVMEDSAFKGLG-NLYGLRLIGNYLENITMHTFRDLPN 568
Query: 187 LTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKN 242
L +++L++N+I + +F +++ ++L N L N GL N L+ N
Sbjct: 569 LQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNEL----NDINGLFSNMPSLLWLN 620
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 66/235 (28%), Positives = 108/235 (45%)
Query: 32 ESESELQSTC-ICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRN 90
ES S +S S +T+ L ++ D+++ N T L +L +NN+ I
Sbjct: 257 ESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGF-GTLRRLRVLSVNNNGISM 315
Query: 91 INENTFNGIFIKNLQLSHCRINSIT--PN------------AFRHLDAIRNINENTFNGI 136
I + +G+ KNLQ+ + N I P + ++I +N F+ +
Sbjct: 316 IADKALSGL--KNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNL 373
Query: 137 F-IKNLQLSHCRINS--ITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLS 193
++ L LS +I S I N F L L LNL N L ++ E L L +++L
Sbjct: 374 DQLQALDLSMNQITSTWIDKNTFVGL-IRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLR 432
Query: 194 KNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSF--RGLELNNNLTLYKNSFRG 246
N++ I D+F+ +NNL TL LS N L Y +++ GL + + L+L N+ G
Sbjct: 433 HNQLENIAADTFAPMNNLHTLLLSHNKLK-YLDAYALNGLYVLSLLSLDNNALIG 486
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 19 LIQGGSAQCPWED-ESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVP 77
L+ G+ C W + ++ ++ + +Q DL++ +F N + T +
Sbjct: 39 LLDCGNCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHLQ 98
Query: 78 -LDLLYINNSAIRNINENTFNGIFIK-NLQLSHCRINSITPNAFRHLDAIRNINENTFNG 135
L L I N ++ +N+ +F + I L LS+ + + PN F L +R I NG
Sbjct: 99 NLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAI---FLNG 155
Query: 136 IFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
NL + ++ FR+L++ L + L+ N L + + + L+ I L N
Sbjct: 156 ----NL------LQALRHGVFRNLKY-LHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNN 204
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDN--NLTLYKNSFRGLELNNNL 237
++ K+ +SF L L L L +N N T FR + NL
Sbjct: 205 ELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMNL 248
>UNIPROTKB|A6NM62 [details] [associations]
symbol:LRRC53 "Leucine-rich repeat-containing protein 53"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021
GO:GO:0008565 InterPro:IPR003591 SMART:SM00369 GO:GO:0006610
EMBL:AC105271 IPI:IPI00252944 ProteinModelPortal:A6NM62 SMR:A6NM62
PhosphoSite:A6NM62 PaxDb:A6NM62 PRIDE:A6NM62
Ensembl:ENST00000416014 GeneCards:GC01M074935 HGNC:HGNC:25255
neXtProt:NX_A6NM62 eggNOG:NOG146774 HOGENOM:HOG000113373
InParanoid:A6NM62 OrthoDB:EOG44XJFZ ArrayExpress:A6NM62 Bgee:A6NM62
Genevestigator:A6NM62 Uniprot:A6NM62
Length = 1247
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/157 (27%), Positives = 83/157 (52%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINS--ITPNAFRHLDAIRNI--NEN- 131
L LL ++ + I ++ E+ +G+ ++ L L H +I+S +T + F L +++ + + N
Sbjct: 59 LALLSLSRNGIEDVQEDALHGLTMLRTLLLEHNQISSSSLTDHTFSKLHSLQVLVLSNNA 118
Query: 132 --TFNGIFIKN------LQLSHCRINSITPNAFRHLEF-TLKHLNLQENDLEQVPVETLR 182
T G + +N LQL +I ++T ++F +L++L+L N + + + R
Sbjct: 119 LRTLRGSWFRNTSGLTRLQLDGNQITNLTDSSFGGTNLHSLRYLDLSNNFISYIGKDAFR 178
Query: 183 HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L L +DLS+N++ +PD F+ L L+ L L N
Sbjct: 179 PLPQLQEVDLSRNRLAHMPD-VFTPLKQLILLSLDKN 214
>DICTYBASE|DDB_G0278509 [details] [associations]
symbol:DDB_G0278509 "MLK family protein kinase
DDB_G0278509" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 dictyBase:DDB_G0278509
GO:GO:0005524 EMBL:AAFI02000023 SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
ProtClustDB:CLSZ2846780 RefSeq:XP_642407.1
ProteinModelPortal:Q54XZ5 EnsemblProtists:DDB0220138 GeneID:8621612
KEGG:ddi:DDB_G0278509 OMA:LEIPENC Uniprot:Q54XZ5
Length = 1248
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 60/223 (26%), Positives = 101/223 (45%)
Query: 31 DESESELQSTC--ICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAI 88
D S + L C + + + EL + N L +P T N + N K L ++N+ I
Sbjct: 463 DLSHNNLHEICRELGNLSFLRELYLSNNSLKKFP---TTGNLY-NLKK----LILDNNQI 514
Query: 89 RNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNG---IF-----IK 139
I + ++ L LS +I +IT + N N G I+ +K
Sbjct: 515 TTIPIECVEPLIQLQTLDLSFNKIGTITSSTTTTTTTTTTNNNNNNGGGGSIYQKMKNLK 574
Query: 140 NLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK 199
L LSH + I P++ RHL L L++ N + +P + + L L + +S NKI +
Sbjct: 575 QLNLSHNELQEI-PSSLRHLS-KLHSLSIDYNQISVLPDKVVASLSRLAKLTISNNKIKQ 632
Query: 200 IPDDSFSTLNNLVTLKLSDNNLTL------YKNSFRGLELNNN 236
+P + + L++L+ L S+N + L Y ++ + L LNNN
Sbjct: 633 LPF-AINNLSSLIELNASNNVIELLPDSICYLSNLKKLNLNNN 674
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 46/172 (26%), Positives = 83/172 (48%)
Query: 81 LYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKN 140
LY++N++++ T N +K L L + +I +I L ++ + + +FN I
Sbjct: 485 LYLSNNSLKKF-PTTGNLYNLKKLILDNNQITTIPIECVEPLIQLQTL-DLSFNKIGTIT 542
Query: 141 LQLSHCRINSITPN---------AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLID 191
+ + T N ++ ++ LK LNL N+L+++P +LRHL L +
Sbjct: 543 SSTTTTTTTTTTNNNNNNGGGGSIYQKMK-NLKQLNLSHNELQEIP-SSLRHLSKLHSLS 600
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDNN---LTLYKNSFRGL-ELN--NNL 237
+ N+I +PD ++L+ L L +S+N L N+ L ELN NN+
Sbjct: 601 IDYNQISVLPDKVVASLSRLAKLTISNNKIKQLPFAINNLSSLIELNASNNV 652
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/250 (26%), Positives = 116/250 (46%)
Query: 9 HLVTLILLTALIQG--GSAQCPWEDESESELQSTCICSYNTANELSIQCNDL--TNYPLF 64
H++ + +T L+Q CP E T Y A+ ++ CNDL N+P
Sbjct: 9 HVLLGLAITTLVQAIDKKVDCPQLCTCEIRPWFTPRSIYMEAS--TVDCNDLGLLNFP-- 64
Query: 65 KATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDA 124
A L +T++ L L NN I I +T + + L LS ++S+T + +
Sbjct: 65 -ARLP--ADTQILL--LQTNN--IARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQ 117
Query: 125 IRNI--NENTFNGI------FIKNLQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
+ ++ EN + + NLQ ++H +++I+P AF L L+ L+L N L
Sbjct: 118 LLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLR-LHLNSNRL 176
Query: 174 EQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLE 232
+ + + L NL ++ L N I +I D +F L L +L ++ NLT + ++ GLE
Sbjct: 177 QMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDALAGLE 236
Query: 233 LNNNLTLYKN 242
+++ Y N
Sbjct: 237 NLESISFYDN 246
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 73 NTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINEN 131
N + LDL ++ I I N F+ + +K LQL +I +I +F L
Sbjct: 44 NDTIRLDL---QDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSL--------- 91
Query: 132 TFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLID 191
+F++ L+LS RI + N F++ L HL+L END+ V L+ + L +++
Sbjct: 92 ----VFLQKLRLSRNRIRHLPDNVFQN-NLKLTHLDLSENDITVVSDAQLQGPEFLEVLN 146
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK---NS-FRGLELNNN 236
L KN I + ++ S+ +L L L+ N LT ++ N+ FR L+L NN
Sbjct: 147 LDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEPSNARFRQLDLFNN 195
Score = 135 (52.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
CR + +T +L + + L++N + +P + ++LKNLT +DLSKN I +I +F
Sbjct: 273 CRDSGLT-YVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAF 331
Query: 206 STLNNLVTLKLSDNNLT-LYKNSFRGL 231
L+NL TL L NN+T L ++F GL
Sbjct: 332 LGLHNLHTLVLYGNNITDLKSDTFEGL 358
Score = 115 (45.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
C ++T R + F L L N + ++P L L +LT +DLS N++ + +++F
Sbjct: 690 CSNKNLTSFPSR-IPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTF 748
Query: 206 STLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
S L L TL +S N L L +F GL L+L+ N
Sbjct: 749 SNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGN 786
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 69 NKHVNTKVPLDLLYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRN 127
N+ ++ V L L ++ + IR++ +N F N + + +L LS I ++ + + +
Sbjct: 85 NQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEV 144
Query: 128 INENTFNGIFI--KNLQLSHCRINSITPNAFRHLEF 161
+N + N IF N+ S + +T N R F
Sbjct: 145 LNLDK-NHIFCLENNVISSWVSLEVLTLNGNRLTTF 179
Score = 48 (22.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/46 (23%), Positives = 29/46 (63%)
Query: 68 LNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRIN 112
LN +++ L++L ++N+ I IN+ +F + ++ L+L+ +++
Sbjct: 529 LNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLH 574
>UNIPROTKB|F1NDB4 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
GO:GO:0010628 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 OMA:CCGNGWL EMBL:AADN02059354
IPI:IPI00584082 Ensembl:ENSGALT00000001192 Uniprot:F1NDB4
Length = 640
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 64/216 (29%), Positives = 108/216 (50%)
Query: 36 ELQSTCICSYNTA---NELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNIN 92
+L I S++T +E S++C DL+ L + + VN V L+L + + I+
Sbjct: 190 DLSRNSIESFHTTESDDEYSLKCLDLSENKLLRFPVFPQVNKLVTLNL---SKNLIQLTA 246
Query: 93 ENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSI 151
E++ N + +++N L P F LD ++ N+++ N + L LS+ I SI
Sbjct: 247 ESSRNKMNYMENEWLD-------AP--FHLLDQKQSRNKSSLNLSHLAYLDLSYNEIKSI 297
Query: 152 TPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNL 211
P+ F F+L LNL +N L+ V + L +LT++DLS N + + + TL NL
Sbjct: 298 -PDEFFESMFSLHTLNLSKNCLQTFEVTSDSTLVSLTVLDLSYNALQSLLLHA-DTLLNL 355
Query: 212 VTLKLSDNNLTLYK-------NSFRGLEL-NNNLTL 239
L + +N+L + + S R L L +NN+TL
Sbjct: 356 KELYIQNNHLQVLQFDIFSRLTSLRWLNLQSNNITL 391
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 49/155 (31%), Positives = 74/155 (47%)
Query: 104 LQLSHCRINSITPNAFRHLDAIRNIN---ENTFN-------GI-FIKN---LQLSHCRIN 149
L LS +I+ ITP F H+ ++ IN N + GI F+ L LSH +
Sbjct: 44 LDLSSNQISFITPGVFAHMTSLLEINLANNNLYELAQTGTEGIGFLPKVEILDLSHNSLY 103
Query: 150 SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLN 209
+ F L++L+L N + + + + NL IDL N I +I + +F TL
Sbjct: 104 NGMAEYFIKRAPALRYLSLAGNSIIMISHKMFQGSPNLVEIDLQSNIIMEIEEGAFETLL 163
Query: 210 NLVTLKLSDNNLTLYKN-SFRGLELNNNLTLYKNS 243
NL L LS N++T + + R LE+ L L +NS
Sbjct: 164 NLSRLNLSMNSITCISDFNLRQLEI---LDLSRNS 195
>UNIPROTKB|E2R416 [details] [associations]
symbol:LUM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005583 "fibrillar
collagen" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
GO:GO:0005615 GO:GO:0045944 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 CTD:4060 KO:K08122 OMA:LHINYNN
PANTHER:PTHR24371:SF1 EMBL:AAEX03009927 RefSeq:XP_539716.1
ProteinModelPortal:E2R416 Ensembl:ENSCAFT00000009934 GeneID:482599
KEGG:cfa:482599 NextBio:20857166 Uniprot:E2R416
Length = 338
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 74/244 (30%), Positives = 114/244 (46%)
Query: 9 HLVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYP--LFKA 66
+L LL ALI G S Q + D S L + S N A E CN +YP ++
Sbjct: 2 NLGVFTLLLALIGGASGQ--YYDYDFS-LPIYGLSSPNCAPE----CNCPESYPSAMYCD 54
Query: 67 TLNKHVNTKVP--LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRI-NS-ITPNAFRH 121
L VP + LY+ N+ I +I+E F + ++ L L H + NS I F
Sbjct: 55 ELKLKSVPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGRIFSK 114
Query: 122 LDAIR--NINENTFN---GIFIKNL---QLSHCRINSITPNAFRHLEFTLKHLNLQENDL 173
L ++ +IN N G K+L QL+H +I + +F L L ++LQ N L
Sbjct: 115 LKQLKKLHINHNNLTESVGPLPKSLVDLQLTHNKIQKL--GSFDGL-VNLTFVHLQHNQL 171
Query: 174 EQVPVET-LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL----YKNSF 228
++ V + LK+L +DLS N++ K+P ++L +TL L +N ++ Y F
Sbjct: 172 KEDTVSAAFKGLKSLEYLDLSYNQMAKLPSGLPASL---LTLYLDNNKISNIPDEYFKRF 228
Query: 229 RGLE 232
GL+
Sbjct: 229 NGLQ 232
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 55/173 (31%), Positives = 85/173 (49%)
Query: 90 NINENT-FNG-IF--IKNLQLSHCRINSIT------PNAFRHLDAIRN-INE-NTFNGIF 137
N+ EN+ G IF +K L+ H N++T P + L N I + +F+G+
Sbjct: 100 NLLENSKIKGRIFSKLKQLKKLHINHNNLTESVGPLPKSLVDLQLTHNKIQKLGSFDGLV 159
Query: 138 -IKNLQLSHCRINSITPNA-FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
+ + L H ++ T +A F+ L+ +L++L+L N + ++P L LTL L N
Sbjct: 160 NLTFVHLQHNQLKEDTVSAAFKGLK-SLEYLDLSYNQMAKLPSGLPASL--LTLY-LDNN 215
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRG---LELNNNLTLYKN 242
KI IPD+ F N L L+LS N L + NSF LEL+ + KN
Sbjct: 216 KISNIPDEYFKRFNGLQYLRLSHNELADSGVPGNSFNVSSLLELDLSYNKLKN 268
>FB|FBgn0032479 [details] [associations]
symbol:CG16974 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
HSSP:P07359 GeneTree:ENSGT00700000105954 FlyBase:FBgn0032479
ChiTaRS:CG16974 EMBL:BT022757 RefSeq:NP_001246018.1
RefSeq:NP_609610.2 UniGene:Dm.10738 SMR:Q9VK28 STRING:Q9VK28
EnsemblMetazoa:FBtr0080489 EnsemblMetazoa:FBtr0305555 GeneID:34713
KEGG:dme:Dmel_CG16974 UCSC:CG16974-RA InParanoid:Q9VK28 OMA:HRIRENC
GenomeRNAi:34713 NextBio:789834 Uniprot:Q9VK28
Length = 1257
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 141 LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKI 200
L LS R+ S N F L+ L+LQ N L+ + +L L+ L +DLS+N + I
Sbjct: 328 LDLSDNRLLSFPDNFFAR-NGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVI 386
Query: 201 PDDSFSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNLTLYKNSFR 245
+F +L++L+ L +S NNLTL + F+ L L L +N F+
Sbjct: 387 DRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFK 432
>TAIR|locus:2098267 [details] [associations]
symbol:IMK2 "inflorescence meristem receptor-like kinase
2" species:3702 "Arabidopsis thaliana" [GO:0004672 "protein kinase
activity" evidence=IEA;NAS] [GO:0004674 "protein serine/threonine
kinase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016020 "membrane" evidence=NAS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0009505 "plant-type cell
wall" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 GO:GO:0009505 InterPro:IPR013210
Pfam:PF08263 HSSP:P58822 HOGENOM:HOG000116554 EMBL:AL132968
EMBL:AF372978 EMBL:AY054515 EMBL:BT006350 EMBL:FJ708739
IPI:IPI00530691 PIR:T46070 RefSeq:NP_190742.1 UniGene:At.669
ProteinModelPortal:Q9SCT4 SMR:Q9SCT4 STRING:Q9SCT4 PaxDb:Q9SCT4
PRIDE:Q9SCT4 EnsemblPlants:AT3G51740.1 GeneID:824337
KEGG:ath:AT3G51740 GeneFarm:540 TAIR:At3g51740 InParanoid:Q9SCT4
OMA:HARAPDS PhylomeDB:Q9SCT4 ProtClustDB:CLSN2915461 Uniprot:Q9SCT4
Length = 836
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/186 (29%), Positives = 93/186 (50%)
Query: 51 LSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHC 109
L++ N L+ PL + + T LDL + N S +I + NG +K L L H
Sbjct: 195 LNLSFNSLSG-PLPVSVARSYTLTF--LDLQHNNLSG--SIPDFFVNGSHPLKTLNLDHN 249
Query: 110 RINSITPNAF-RH--LDAIRNINENTFNGIF---------IKNLQLSHCRINSITPNAFR 157
R + P + +H L+ + +I+ N +G +++L S+ IN P++F
Sbjct: 250 RFSGAVPVSLCKHSLLEEV-SISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFS 308
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI-GKIPDDSFSTLNNLVTLKL 216
+L +L LNL+ N L+ + + L NLT ++L +NKI G IP+ + ++ + L L
Sbjct: 309 NLS-SLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPE-TIGNISGIKKLDL 366
Query: 217 SDNNLT 222
S+NN T
Sbjct: 367 SENNFT 372
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/157 (27%), Positives = 77/157 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIR 126
L+ L + ++ IR + E TF G+ ++ L L+ +I + AF L + +R
Sbjct: 315 LEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLR 374
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++ E F G+ + +L L H + + + F L L+ L L++N + + ++L L
Sbjct: 375 SLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLS-GLRRLFLRDNSISSIEEQSLAGLS 433
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
L +DL+ N++ +P F L +L L LS N LT
Sbjct: 434 ELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 470
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 80 LLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI 136
++ ++ + +R++ E F G+ + +L L H + + + F L +R + +N+ + I
Sbjct: 365 VMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSI 424
Query: 137 FIKNLQ-LSHCRINSITPNAFRHLE---FT----LKHLNLQENDLEQVPVETLRHLKNLT 188
++L LS +T N HL F L++L L N L + E L L+
Sbjct: 425 EEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAF 484
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
+D+S N + + + FS+L L L L +N+L + GLE
Sbjct: 485 WLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQ-PGLE 527
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 121 HLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
+L +I + + + NLQ S R S+ P A L+ L HL+L+ N L + V
Sbjct: 84 NLSSIPSAAFQNLSSLDFLNLQGSWLR--SLEPQALLGLQ-NLYHLHLERNRLRNLAVGL 140
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNS-FRGLELNNNLTL 239
H +L + LS N +G++ + F L++L L L N+L + ++ F+GL + L L
Sbjct: 141 FTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVL 200
Query: 240 YKN 242
N
Sbjct: 201 AGN 203
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/157 (27%), Positives = 77/157 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHL----------DAIR 126
L+ L + ++ IR + E TF G+ ++ L L+ +I + AF L + +R
Sbjct: 316 LEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLR 375
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
++ E F G+ + +L L H + + + F L L+ L L++N + + ++L L
Sbjct: 376 SLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLS-GLRRLFLRDNSISSIEEQSLAGLS 434
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
L +DL+ N++ +P F L +L L LS N LT
Sbjct: 435 ELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLT 471
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 41/164 (25%), Positives = 77/164 (46%)
Query: 80 LLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFNGI 136
++ ++ + +R++ E F G+ + +L L H + + + F L +R + +N+ + I
Sbjct: 366 VMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSI 425
Query: 137 FIKNLQ-LSHCRINSITPNAFRHLE---FT----LKHLNLQENDLEQVPVETLRHLKNLT 188
++L LS +T N HL F L++L L N L + E L L+
Sbjct: 426 EEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAF 485
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
+D+S N + + + FS+L + L L +N+L + GLE
Sbjct: 486 WLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQ-PGLE 528
>UNIPROTKB|E1C7T4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0007569 "cell aging" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0031012 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 CTD:5549 KO:K08125
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:AADN02066901
IPI:IPI00587003 RefSeq:XP_418054.2 PRIDE:E1C7T4
Ensembl:ENSGALT00000005617 GeneID:419933 KEGG:gga:419933
NextBio:20822920 Uniprot:E1C7T4
Length = 374
Score = 134 (52.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 125 IRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I ++ E +F N +K + L + RI + LE L L +++N L++VP +
Sbjct: 105 IDDLPEESFRNATALKWVNLDNNRIRKVDRRVLEKLE-NLIFLYMEKNQLKEVPAFLPPN 163
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRGLELNNNLTLY 240
L+ L L S+N+I KIP F+ L NLV L L N L+ KN+F+GL+ L L
Sbjct: 164 LEQLRL---SRNQISKIPAGVFNKLENLVLLDLHHNKLSDGVFNKNTFKGLKNLMQLNLA 220
Query: 241 KNSFR 245
N R
Sbjct: 221 HNILR 225
Score = 131 (51.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 50/175 (28%), Positives = 79/175 (45%)
Query: 70 KHVNTKVP--LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN 127
K V +P L+ L ++ + I I FN + +NL L N ++ F
Sbjct: 154 KEVPAFLPPNLEQLRLSRNQISKIPAGVFNKL--ENLVLLDLHHNKLSDGVF-------- 203
Query: 128 INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKN 186
N+NTF G+ + L L+H + + P + + L L N++E +P + + N
Sbjct: 204 -NKNTFKGLKNLMQLNLAHNILRKMPPG----VPSAIHQLFLDRNNIEDIPSDYFKEFPN 258
Query: 187 LTLIDLSKNKIGK--IPDDSFSTLNNLVTLKLSDNNLT---LYKNSFRGLELNNN 236
L I L+ N+I +P +SF+ L NL+ L L+ N LT L LNNN
Sbjct: 259 LAFIRLNYNQISDKGLPKNSFN-LTNLLVLHLAHNKLTNVPFISAKLEHLYLNNN 312
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
LY+ N+ I ++ E +F N +K + L + RI R +D R + E N IF
Sbjct: 98 LYLQNNFIDDLPEESFRNATALKWVNLDNNRI--------RKVD--RRVLEKLENLIF-- 145
Query: 140 NLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI-- 197
L + ++ + P AF L L+ L L N + ++P L+NL L+DL NK+
Sbjct: 146 -LYMEKNQLKEV-P-AF--LPPNLEQLRLSRNQISKIPAGVFNKLENLVLLDLHHNKLSD 200
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL 221
G ++F L NL+ L L+ N L
Sbjct: 201 GVFNKNTFKGLKNLMQLNLAHNIL 224
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 135 (52.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 122 LDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
L+ I++I F+ ++ + LS+ +I I P+AF+ L +L L L N + +P
Sbjct: 318 LNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPRGV 376
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL 239
L L L+ L+ NKI I D+F L NL L L DN + +L K +F L L L
Sbjct: 377 FGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Query: 240 YKNSF 244
+N F
Sbjct: 437 AQNPF 441
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF---RHLDAIRNINENTF--- 133
L +N + I I++N F G+ ++ LQL +I ++ AF + L+ +R +N N
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLR-LNRNQLQVL 124
Query: 134 ------NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
N + L LS + ++ AFR LK+L L +N + + R L+ L
Sbjct: 125 PELLFQNNQALSRLDLSENFLQAVPRKAFRGAT-DLKNLQLDKNRISCIEEGAFRALRGL 183
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
++ L+ N I IP SF+ + L T +L N+L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 37/123 (30%), Positives = 68/123 (55%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I I++N F G+ ++ LQL +I ++ AF ++ L+ L L N L+ +P ++
Sbjct: 73 ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMK-ELERLRLNRNQLQVLPELLFQN 131
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR---GLEL----NN 235
+ L+ +DLS+N + +P +F +L L+L N ++ + + +FR GLE+ NN
Sbjct: 132 NQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNN 191
Query: 236 NLT 238
N+T
Sbjct: 192 NIT 194
Score = 100 (40.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L N VP + L K L L+DLS NKI + + SF+ ++ L TL LS N L
Sbjct: 766 LYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 824
Query: 226 N-SFRGLELNNNLTLYKN 242
+F+GL L+L+ N
Sbjct: 825 PLAFQGLRSLRLLSLHGN 842
Score = 90 (36.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 47 TANELSIQCNDLTNYPLFKAT-LNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNL 104
+ EL + N+++ + +AT L K ++ L + ++N+ + I + TF G + L
Sbjct: 541 STTELRLNNNEIS---ILEATGLFKKLSH---LKKINLSNNKVSEIEDGTFEGAASVSEL 594
Query: 105 QLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSITP 153
L+ ++ SI FR LD +R I+ ++F G+ ++ L L I +I+P
Sbjct: 595 HLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Query: 154 NAFRHLEFTLKHLNLQEN 171
AF L+ L LNL N
Sbjct: 655 GAFDTLQ-ALSTLNLLAN 671
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + N+ I I+ ++F G+ ++ L L I +I+P AF L A+ +N N FN
Sbjct: 615 LRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 674
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 78 LDLLYINNSAIRNINENTFN 97
L++L +NN+ I I ++FN
Sbjct: 183 LEVLTLNNNNITTIPVSSFN 202
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 120 (47.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LY 224
L L N VP E L + K+LTLIDLS N+I + + SFS + L+TL LS N L L
Sbjct: 272 LYLDGNQFTLVPKE-LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLP 330
Query: 225 KNSFRGLELNNNLTLYKN 242
+F GL+ L+L+ N
Sbjct: 331 PRTFDGLKSLRLLSLHGN 348
Score = 64 (27.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 49 NELSIQCNDLTN--YPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQ 105
NE+ + N L N Y +FK + + T LD + ++ I + ++F G+ ++ L
Sbjct: 98 NEILLTSNRLENVQYKMFKGL--ESLKT---LD---VRSNRISCVGNDSFIGLSSVRLLS 149
Query: 106 LSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L +I +I P AF L ++ +N N FN
Sbjct: 150 LYDNQITTIAPGAFDTLHSLSTLNLLANPFN 180
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/164 (26%), Positives = 84/164 (51%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
L +N + I I++N F+G+ ++ LQL +I+ + AF D ++ + +
Sbjct: 73 LELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAF---DDMKEL----------E 119
Query: 140 NLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK 199
L+L+ +++++ F+H + L L+L EN ++ +P + R +L + L KN+I
Sbjct: 120 RLRLNRNQLHTLPELLFQHNQ-ALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISC 178
Query: 200 IPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
I D +F L L L L++NN+T + +SF + L+ N
Sbjct: 179 IEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSN 222
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 62/224 (27%), Positives = 100/224 (44%)
Query: 13 LILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHV 72
L+ AL +G +A CP C CS T + C+ T + V
Sbjct: 27 LLAFVALCRGRAAACP----------PLCACSGTT-----VDCH---------GTALRAV 62
Query: 73 NTKVP--LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF---RHLDAIR 126
+P + L +N + I I++N F+G+ ++ LQL +I+ + AF + L+ +R
Sbjct: 63 PKSIPRGTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLR 122
Query: 127 NINENTFNGI----FIKN-----LQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP 177
+N N + + F N L LS I +I AFR LK+L L +N + +
Sbjct: 123 -LNRNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGAT-DLKNLQLDKNQISCIE 180
Query: 178 VETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
R L+ L ++ L+ N I IP SF+ + L T +L N+L
Sbjct: 181 DGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHL 224
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/135 (34%), Positives = 63/135 (46%)
Query: 111 INSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQE 170
I SI P AF +R I F LS+ +I+ I P+AF+ L +L L L
Sbjct: 328 IKSIPPGAFSPYKKLRRILPLGFR-------DLSNNQISEIAPDAFQGLR-SLNSLVLYG 379
Query: 171 NDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFR 229
N + +P L L L+ L+ NKI + D+F L NL L L DN + +L K +F
Sbjct: 380 NKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFT 439
Query: 230 GLELNNNLTLYKNSF 244
L L L +N F
Sbjct: 440 SLRAIQTLHLAQNPF 454
Score = 90 (36.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 34/150 (22%), Positives = 72/150 (48%)
Query: 47 TANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQL 106
T E+ ++ N + + P + K + +PL ++N+ I I + F G+ ++L
Sbjct: 317 TMTEIRLELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGL--RSL-- 372
Query: 107 SHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHC-RINSITPNAFRHLEFTLKH 165
NS+ + + I ++ + F G+F L L + +IN + +AF+ L+ L
Sbjct: 373 -----NSLV----LYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQ-NLSL 422
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
L+L +N ++ + T L+ + + L++N
Sbjct: 423 LSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 452
Score = 74 (31.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
L N+I I +DSF+ L N+ L L DN + T+ +F L+ + L L N F
Sbjct: 634 LRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPF 687
>FB|FBgn0000709 [details] [associations]
symbol:fliI "flightless I" species:7227 "Drosophila
melanogaster" [GO:0007629 "flight behavior" evidence=IMP]
[GO:0010004 "gastrulation involving germ band extension"
evidence=IMP] [GO:0003779 "actin binding" evidence=ISS;NAS]
[GO:0005509 "calcium ion binding" evidence=ISS;NAS] [GO:0030239
"myofibril assembly" evidence=IMP] [GO:0007527 "adult somatic
muscle development" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007122 PRINTS:PR00597 PROSITE:PS51450 SMART:SM00262
GO:GO:0003779 GO:GO:0007527 EMBL:AE014298 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030239 GO:GO:0007629
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010004 EMBL:AF017777
GeneTree:ENSGT00660000095502 OMA:MEEWNED EMBL:U01182 EMBL:AF132184
PIR:S60461 RefSeq:NP_525097.1 UniGene:Dm.1666
ProteinModelPortal:Q24020 SMR:Q24020 IntAct:Q24020 STRING:Q24020
PaxDb:Q24020 PRIDE:Q24020 EnsemblMetazoa:FBtr0077192 GeneID:33110
KEGG:dme:Dmel_CG1484 CTD:2314 FlyBase:FBgn0000709
HOGENOM:HOG000263916 InParanoid:Q24020 OrthoDB:EOG4DR7T5
GenomeRNAi:33110 NextBio:781957 Bgee:Q24020 GermOnline:CG1484
Uniprot:Q24020
Length = 1256
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 52/179 (29%), Positives = 86/179 (48%)
Query: 67 TLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIR 126
TL++ ++P +L ++ ++N N IF + +LS C + S+ RH + ++
Sbjct: 35 TLDRTQLAEIPEELGHLQKLEHLSLNHNRLEKIFGELTELS-C-LRSLD---LRH-NQLK 88
Query: 127 N--INENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
N I F+ + L LSH ++ + P + L LNL N +E +P HL
Sbjct: 89 NSGIPPELFHLEELTTLDLSHNKLKEV-PEGLERAK-NLIVLNLSNNQIESIPTPLFIHL 146
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLYKNS 243
+L +DLS N++ +P + L NL TL LS N L L++ R L +L + K S
Sbjct: 147 TDLLFLDLSHNRLETLPPQT-RRLINLKTLDLSHNPLELFQ--LRQLPSLQSLEVLKMS 202
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 54/180 (30%), Positives = 86/180 (47%)
Query: 64 FKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLD 123
F AT + + L ++ + + I E + +++L L+H R+ I L
Sbjct: 17 FSATFPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHNRLEKIF-GELTELS 75
Query: 124 AIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
+R+++ +++ QL + + I P F HLE L L+L N L++VP E L
Sbjct: 76 CLRSLD--------LRHNQLKN---SGIPPELF-HLE-ELTTLDLSHNKLKEVP-EGLER 121
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKN 242
KNL +++LS N+I IP F L +L+ L LS N L TL + R + L L L N
Sbjct: 122 AKNLIVLNLSNNQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKT-LDLSHN 180
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/111 (27%), Positives = 64/111 (57%)
Query: 124 AIRNINENTFN-GIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLR 182
++ +++++ F G+ I++LQ SH + ++ N+ R++ +L+ L++ L Q+P L
Sbjct: 109 SVTSLSQDVFQPGVHIRHLQFSHSHLEALKDNSLRNVRSSLESLSIVNGKLTQMPSRALS 168
Query: 183 HLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLE 232
++ LT +D N+I ++ D SF L + L + N L + +++F GLE
Sbjct: 169 SMQKLTALDFDYNEIVRVDDYSFYGLR-ISKLNMKGNRLQGMPEHAFAGLE 218
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/168 (28%), Positives = 82/168 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L ++++ + + + F+ F + +L L +C + + +AF+ L N+NE +
Sbjct: 667 LKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLT---NLNE-----L 718
Query: 137 FIKNLQLSHCRINSIT-PNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKN 195
++ QL+ I ++ PN R L L H N + L L++L + +S
Sbjct: 719 NLERNQLNPADIQTLDIPNLRRLL---LSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNC 775
Query: 196 KIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
+G+IPD F+ NLV L L DN LT + +N F GL + L L +N
Sbjct: 776 SLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVFKELRLCRN 823
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 55/221 (24%), Positives = 104/221 (47%)
Query: 30 EDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIR 89
+ S +++ + +++Q N LT N + V L+ Y++ R
Sbjct: 505 QKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSL-LSVQLEANYLHKVHPR 563
Query: 90 NIN-ENTFNGIFIKNLQLSHCRINSI--TPNAFR-HL--DAIRNINENTF-NGIFIKNLQ 142
+ + +++K+ QL+ + TP R +L + IR+I ++TF N + ++ L
Sbjct: 564 TFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTFVNLLLLQFLD 623
Query: 143 LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPD 202
LS ++ + + F L+ L+ L+L N +E + LKNL +DLS N + ++
Sbjct: 624 LSGNQLRQLRRDYFAPLQ-DLEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTR 682
Query: 203 DSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
D FS L +L L + +L L +++F+ L N L L +N
Sbjct: 683 DIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERN 723
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 42/151 (27%), Positives = 74/151 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
+D++Y+ ++AI +I+ N F+ + NL + R N I P L + +++T
Sbjct: 403 VDVIYLESNAIAHIDPNVFSTLV--NLDHLYLRSNFI-P-----LLPVTLFDKSTK---- 450
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ +L L + I + FR LE L+ + L N + +V L +L + + KN I
Sbjct: 451 LTSLSLDNNEIQDLEIGMFRKLEH-LREVRLHNNRIRRVRRGVFEPLPSLQELHIQKNSI 509
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSF 228
I +F TL N+ + L DN LT+ ++ F
Sbjct: 510 EDIEPQAFHTLENMQHINLQDNQLTVLEDIF 540
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 52/178 (29%), Positives = 84/178 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L ++++ I + F +K L +I + P AF+ L + +++ N
Sbjct: 284 LIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRII 343
Query: 135 G----IFIKN--LQ---LSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
G +F KN LQ LSH I++I F +L L+ + L EN++ ++P + +
Sbjct: 344 GLDPKVFEKNKRLQTVDLSHNHIHTIG-GVFSNLP-QLREVFLSENNILELPADAFTNST 401
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-----TLYKNSFR--GLELNNN 236
N+ +I L N I I + FSTL NL L L N + TL+ S + L L+NN
Sbjct: 402 NVDVIYLESNAIAHIDPNVFSTLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNN 459
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 40/182 (21%), Positives = 79/182 (43%)
Query: 40 TCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI 99
T + +N N + DL+ L N + + L ++++N+ I + + +
Sbjct: 874 TALSGFNAVNLTQLDSVDLSGNLLLSLPAN-FLRHSINLQKVHLSNNRFLQIPSSALSDV 932
Query: 100 FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHL 159
I L +N +T N ++ I + E + ++K L + ++ +T F
Sbjct: 933 SIPRLSW----LN-LTGNP---INRIYTVKEERYP--YLKELYICQTNLSILTSKDFEAF 982
Query: 160 EFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
+ L+HL+L N + ++ + L NL +DLS N++ +P + L L L +S N
Sbjct: 983 Q-ALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHN 1041
Query: 220 NL 221
L
Sbjct: 1042 TL 1043
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN + KI +F+ L +L TL+L DN LT
Sbjct: 91 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 150
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 151 VPTQAFEYLSKLRELWLRNN 170
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN + KI +F+ L +L TL+L DN LT
Sbjct: 91 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 150
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 151 VPTQAFEYLSKLRELWLRNN 170
>POMBASE|SPBC887.09c [details] [associations]
symbol:SPBC887.09c "leucine-rich repeat protein Sog2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000920
"cytokinetic cell separation" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007165
"signal transduction" evidence=ISO] [GO:0032153 "cell division
site" evidence=IDA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 PomBase:SPBC887.09c
GO:GO:0005829 GO:GO:0005634 GO:GO:0007165 GO:GO:0043234
GO:GO:0032153 GO:GO:0044732 GO:GO:0051286 EMBL:CU329671
eggNOG:COG4886 GenomeReviews:CU329671_GR GO:GO:0000920 PIR:T40734
RefSeq:NP_596483.1 ProteinModelPortal:O94294 PRIDE:O94294
EnsemblFungi:SPBC887.09c.1 GeneID:2541171 KEGG:spo:SPBC887.09c
OMA:ETHENGS OrthoDB:EOG4JDMG6 NextBio:20802283 InterPro:IPR019487
Pfam:PF10428 Uniprot:O94294
Length = 886
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFT-LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
I L L H I SI P L+FT L++LN++ N L + P E+L L++L ++D+S+NK
Sbjct: 54 IARLALGHNFIKSIGPEI---LKFTRLRYLNIRSNVLREFP-ESLCRLESLEILDISRNK 109
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNL 221
I ++P+ SF L NL L +S N L
Sbjct: 110 IKQLPE-SFGALMNLKVLSISKNRL 133
>FB|FBgn0262473 [details] [associations]
symbol:Tl "Toll" species:7227 "Drosophila melanogaster"
[GO:0019730 "antimicrobial humoral response" evidence=IGI]
[GO:0019732 "antifungal humoral response" evidence=IMP] [GO:0006963
"positive regulation of antibacterial peptide biosynthetic process"
evidence=IMP] [GO:0006967 "positive regulation of antifungal
peptide biosynthetic process" evidence=IMP] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;NAS]
[GO:0008063 "Toll signaling pathway" evidence=IEA;NAS] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS;TAS] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP;NAS;TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0006955 "immune response" evidence=TAS] [GO:0009620 "response
to fungus" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0070976 "TIR domain binding" evidence=IPI]
[GO:0009617 "response to bacterium" evidence=NAS] [GO:0050832
"defense response to fungus" evidence=TAS] [GO:0045087 "innate
immune response" evidence=IDA;NAS;TAS] [GO:0019955 "cytokine
binding" evidence=TAS] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IEA;TAS] [GO:0035007 "regulation
of melanization defense response" evidence=TAS] [GO:0035172
"hemocyte proliferation" evidence=IMP;TAS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0007352 "zygotic specification of
dorsal/ventral axis" evidence=IEA;NAS] [GO:0045610 "regulation of
hemocyte differentiation" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0033565 "ESCRT-0
complex" evidence=IDA] [GO:0016201 "synaptic target inhibition"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027202 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 EMBL:AE014297 GO:GO:0016021 GO:GO:0007507
GO:GO:0009897 GO:GO:0050830 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0045087 GO:GO:0000910 GO:GO:0007416 GO:GO:0019732
GO:GO:0030097 GO:GO:0019955 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0004888 GO:GO:0008063 GO:GO:0006963
GO:GO:0035172 GO:GO:0006967 GeneTree:ENSGT00700000104286
GO:GO:0007352 GO:GO:0045610 GO:GO:0033565 SUPFAM:SSF52200
GO:GO:0016201 EMBL:M19969 EMBL:BT031153 EMBL:AY349649 EMBL:AY349650
EMBL:AY349651 EMBL:AY349652 EMBL:AY349653 EMBL:AY349654
EMBL:AY349655 EMBL:AY121616 PIR:A29943 RefSeq:NP_524518.1
RefSeq:NP_733166.1 UniGene:Dm.2347 ProteinModelPortal:P08953
SMR:P08953 DIP:DIP-34358N IntAct:P08953 STRING:P08953 PaxDb:P08953
PRIDE:P08953 EnsemblMetazoa:FBtr0085059 EnsemblMetazoa:FBtr0330155
GeneID:43222 KEGG:dme:Dmel_CG5490 CTD:109651 FlyBase:FBgn0262473
InParanoid:P08953 OMA:STNDICP OrthoDB:EOG4SF7MS PhylomeDB:P08953
ChiTaRS:Tl GenomeRNAi:43222 NextBio:832799 Bgee:P08953
GermOnline:CG5490 PANTHER:PTHR24371:SF0 Uniprot:P08953
Length = 1097
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 49 NELSIQCNDLTNYPLFKAT----LNKHVN--TKVPLDLL-YINNSAIRNINENTFN---- 97
N S Q ++LT + AT ++ H N ++P D+ ++ N N++ N F
Sbjct: 227 NLWSNQLHNLTKHDFEGATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLFRSLPQ 286
Query: 98 GIFIKNLQLSHCRI-NSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINSITPNAF 156
G+F N L+ R+ N+ P A N E ++ L+L + S+ + F
Sbjct: 287 GLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPE-------LQILRL-RAELQSLPGDLF 338
Query: 157 RHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKL 216
H + +++L +N L+ +P L H NL +DLS N++ +PD F+ NL L+L
Sbjct: 339 EH-STQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTNLTDLRL 397
Query: 217 SDNNLT-LYKNSFRGLELNNNLTLYKNSFR 245
DN LT + + F L L + +N R
Sbjct: 398 EDNLLTGISGDIFSNLGNLVTLVMSRNRLR 427
>TAIR|locus:2171963 [details] [associations]
symbol:RLP55 "receptor like protein 55" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB012245 IPI:IPI00546089
RefSeq:NP_199389.1 UniGene:At.28004 ProteinModelPortal:Q9FK66
SMR:Q9FK66 PaxDb:Q9FK66 PRIDE:Q9FK66 EnsemblPlants:AT5G45770.1
GeneID:834616 KEGG:ath:AT5G45770 TAIR:At5g45770 eggNOG:NOG280143
HOGENOM:HOG000082852 InParanoid:Q9FK66 OMA:IRISITR PhylomeDB:Q9FK66
ProtClustDB:CLSN2916889 Genevestigator:Q9FK66 Uniprot:Q9FK66
Length = 425
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/156 (30%), Positives = 78/156 (50%)
Query: 78 LDLLYINNSAI---RNINENTFNGIFIKNLQLSHCRINSITPNAF----RHLDAIRNINE 130
L LYI+++ I R + N + +L +S+ + + P +F R++D N +
Sbjct: 147 LKTLYISSTPIQTSRRLYVILGNMHKLTSLTISNSNLTGLIPKSFHSNLRYIDLSNNSLK 206
Query: 131 NTFN-GIF----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
+ I +K+L LSH ++ PN + L F LK+L+L N L +L +
Sbjct: 207 GSIRISITRLKNLKSLNLSHNSLSGQIPNKIKSLTF-LKNLSLASNKLSGTIPNSLSSIS 265
Query: 186 NLTLIDLSKNKI-GKIPDDSFSTLNNLVTLKLSDNN 220
LT +DLS N++ G +P FS + NL L L+DN+
Sbjct: 266 ELTHLDLSMNQLNGTVPS-FFSEMKNLKHLNLADNS 300
Score = 114 (45.2 bits), Expect = 0.00049, P = 0.00049
Identities = 57/185 (30%), Positives = 88/185 (47%)
Query: 85 NSAIRNINENTFNGIFIKNLQ-LSHCRINSITPNAFRHLDAIRN---------INENTFN 134
+S ++N N +G+F+ L+ L I+S R L I I+ +
Sbjct: 126 SSFLQN-NRTKLSGLFLARLKNLKTLYISSTPIQTSRRLYVILGNMHKLTSLTISNSNLT 184
Query: 135 GIFIKNLQLSHCRINSITPNAFR---HLEFT----LKHLNLQENDLE-QVP--VETLRHL 184
G+ K+ S+ R ++ N+ + + T LK LNL N L Q+P +++L L
Sbjct: 185 GLIPKSFH-SNLRYIDLSNNSLKGSIRISITRLKNLKSLNLSHNSLSGQIPNKIKSLTFL 243
Query: 185 KNLTLIDLSKNKI-GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNN--NLTLYK 241
KNL+L + NK+ G IP+ S S+++ L L LS N L SF E+ N +L L
Sbjct: 244 KNLSL---ASNKLSGTIPN-SLSSISELTHLDLSMNQLNGTVPSFFS-EMKNLKHLNLAD 298
Query: 242 NSFRG 246
NSF G
Sbjct: 299 NSFHG 303
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 63/227 (27%), Positives = 110/227 (48%)
Query: 5 FSP--FHLVTLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYP 62
FSP FH + L L+ ++ EL +T I + + AN + ++ T
Sbjct: 213 FSPGCFHAIGK-LFVLLLNNAQLNLNLTEKLCWELSNTSIQNLSLANNQLLATSNST--- 268
Query: 63 LFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRH 121
F K N LDL Y NS +R + + F+ + +K L L + I S+TP++FR
Sbjct: 269 -FSGL--KQTNL-TSLDLSY--NS-LRYVGNDAFSWLPHLKYLSLEYNNIQSLTPHSFRG 321
Query: 122 LDAIRNINENTFNGIFIK-NLQL-SHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVE 179
L +R ++ F K ++ L SH I+ + F+ L+ L+HLN+ +N + +
Sbjct: 322 LSNLRYLS---LKRAFTKQSVALASHPNIDDFS---FQWLK-CLEHLNMDDNTIPGIKSN 374
Query: 180 TLRHLKNLTLIDLSKNKIG--KIPDDSFSTLNN--LVTLKLSDNNLT 222
T L +L + LSK G + +++F +L + L+TL L+ N+++
Sbjct: 375 TFTGLVSLKYLSLSKTFTGLQTLTNETFVSLTHSPLLTLNLTKNHIS 421
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 48/147 (32%), Positives = 68/147 (46%)
Query: 107 SHCRINSITPNAFRHLDAIRNINENTFNGI----FIKNLQLS--HCRINSIT---PNAFR 157
SH ++ I P+ + N+ N G+ F + QL+ NSI+ P +
Sbjct: 39 SHLKLTHI-PDDLPSNITVLNLTHNQLRGLPPANFTRYSQLALLDAGFNSISKLEPELCQ 97
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
L LK LNLQ N+L Q+ +T NLT + L N I KI + F +L+ L LS
Sbjct: 98 ILPL-LKVLNLQHNELSQISDQTFAFCTNLTELHLMSNSIRKIKSNPFKNQKSLIKLDLS 156
Query: 218 DNNLTLYKNSFRGLELNN--NLTLYKN 242
N L+ K G++L N L L KN
Sbjct: 157 RNGLSSTKLG-TGVQLENLQELLLAKN 182
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 60/203 (29%), Positives = 95/203 (46%)
Query: 49 NELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNS--AIRNINENTFNGIFIKNLQL 106
N+ S+ DL+ L L V + +LL N A+R+ + ++ L L
Sbjct: 146 NQKSLIKLDLSRNGLSSTKLGTGVQLENLQELLLAKNKIFALRSEELDFLGNSSLQKLDL 205
Query: 107 SHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRIN-SITPNAFRHLEFT-LK 164
S + +P F H AI + F+ L L++ ++N ++T L T ++
Sbjct: 206 SSNPLKEFSPGCF-H--AIGKL--------FV--LLLNNAQLNLNLTEKLCWELSNTSIQ 252
Query: 165 HLNLQENDLEQVPVETLRHLK--NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL- 221
+L+L N L T LK NLT +DLS N + + +D+FS L +L L L NN+
Sbjct: 253 NLSLANNQLLATSNSTFSGLKQTNLTSLDLSYNSLRYVGNDAFSWLPHLKYLSLEYNNIQ 312
Query: 222 TLYKNSFRGLELNNNLTLYKNSF 244
+L +SFRGL L+L K +F
Sbjct: 313 SLTPHSFRGLSNLRYLSL-KRAF 334
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 135 (52.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 122 LDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
L+ I++I F+ ++ + LS+ +I I P+AF+ L +L L L N + +P
Sbjct: 318 LNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPRGV 376
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL 239
L L L+ L+ NKI I D+F L NL L L DN + +L K +F L L L
Sbjct: 377 FGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Query: 240 YKNSF 244
+N F
Sbjct: 437 AQNPF 441
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF---RHLDAIRNINENTF--- 133
L +N + I I++N F G+ ++ LQL +I ++ AF + L+ +R +N N
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLR-LNRNQLQVL 124
Query: 134 ------NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
N + L LS + ++ AFR LK+L L +N + + R L+ L
Sbjct: 125 PELLFQNNQALSRLDLSENSLQAVPRKAFRGAT-DLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
++ L+ N I IP SF+ + L T +L N+L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 37/123 (30%), Positives = 68/123 (55%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I I++N F G+ ++ LQL +I ++ AF ++ L+ L L N L+ +P ++
Sbjct: 73 ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMK-ELERLRLNRNQLQVLPELLFQN 131
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR---GLEL----NN 235
+ L+ +DLS+N + +P +F +L L+L N ++ + + +FR GLE+ NN
Sbjct: 132 NQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNN 191
Query: 236 NLT 238
N+T
Sbjct: 192 NIT 194
Score = 100 (40.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L N VP + L K L L+DLS NKI + + SF+ ++ L TL LS N L
Sbjct: 766 LYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 824
Query: 226 N-SFRGLELNNNLTLYKN 242
+F+GL L+L+ N
Sbjct: 825 PLAFQGLRSLRLLSLHGN 842
Score = 89 (36.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 47 TANELSIQCNDLTNYPLFKAT-LNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNL 104
+ EL + N+++ + +AT L K ++ L + ++N+ + I + TF G + L
Sbjct: 541 STTELRLNNNEIS---ILEATGLFKKLSH---LKKINLSNNKVSEIEDGTFEGATSVSEL 594
Query: 105 QLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSITP 153
L+ ++ S+ FR LD +R I+ ++F G+ ++ L L I +I+P
Sbjct: 595 HLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Query: 154 NAFRHLEFTLKHLNLQEN 171
AF L+ L LNL N
Sbjct: 655 GAFDTLQ-ALSTLNLLAN 671
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + N+ I I+ ++F G+ ++ L L I +I+P AF L A+ +N N FN
Sbjct: 615 LRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 674
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 78 LDLLYINNSAIRNINENTFN 97
L++L +NN+ I I ++FN
Sbjct: 183 LEVLTLNNNNITTIPVSSFN 202
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 135 (52.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 122 LDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
L+ I++I F+ ++ + LS+ +I I P+AF+ L +L L L N + +P
Sbjct: 318 LNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLR-SLNSLVLYGNKITDLPRGV 376
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL 239
L L L+ L+ NKI I D+F L NL L L DN + +L K +F L L L
Sbjct: 377 FGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Query: 240 YKNSF 244
+N F
Sbjct: 437 AQNPF 441
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF---RHLDAIRNINENTF--- 133
L +N + I I++N F G+ ++ LQL +I ++ AF + L+ +R +N N
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLR-LNRNQLQVL 124
Query: 134 ------NGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNL 187
N + L LS + ++ AFR LK+L L +N + + R L+ L
Sbjct: 125 PELLFQNNQALSRLDLSENSLQAVPRKAFRGAT-DLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
++ L+ N I IP SF+ + L T +L N+L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 37/123 (30%), Positives = 68/123 (55%)
Query: 125 IRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
I I++N F G+ ++ LQL +I ++ AF ++ L+ L L N L+ +P ++
Sbjct: 73 ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMK-ELERLRLNRNQLQVLPELLFQN 131
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFR---GLEL----NN 235
+ L+ +DLS+N + +P +F +L L+L N ++ + + +FR GLE+ NN
Sbjct: 132 NQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNN 191
Query: 236 NLT 238
N+T
Sbjct: 192 NIT 194
Score = 100 (40.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L N VP + L K L L+DLS NKI + + SF+ ++ L TL LS N L
Sbjct: 766 LYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 824
Query: 226 N-SFRGLELNNNLTLYKN 242
+F+GL L+L+ N
Sbjct: 825 PLAFQGLRSLRLLSLHGN 842
Score = 89 (36.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 37/138 (26%), Positives = 67/138 (48%)
Query: 47 TANELSIQCNDLTNYPLFKAT-LNKHVNTKVPLDLLYINNSAIRNINENTFNGIF-IKNL 104
+ EL + N+++ + +AT L K ++ L + ++N+ + I + TF G + L
Sbjct: 541 STTELRLNNNEIS---ILEATGLFKKLSH---LKKINLSNNKVSEIEDGTFEGATSVSEL 594
Query: 105 QLSHCRINSITPNAFRHLDAIRN----------INENTFNGIF-IKNLQLSHCRINSITP 153
L+ ++ S+ FR LD +R I+ ++F G+ ++ L L I +I+P
Sbjct: 595 HLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISP 654
Query: 154 NAFRHLEFTLKHLNLQEN 171
AF L+ L LNL N
Sbjct: 655 GAFDTLQ-ALSTLNLLAN 671
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + N+ I I+ ++F G+ ++ L L I +I+P AF L A+ +N N FN
Sbjct: 615 LRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFN 674
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 78 LDLLYINNSAIRNINENTFN 97
L++L +NN+ I I ++FN
Sbjct: 183 LEVLTLNNNNITTIPVSSFN 202
>MGI|MGI:2385129 [details] [associations]
symbol:Lrrc26 "leucine rich repeat containing 26"
species:10090 "Mus musculus" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0008076 "voltage-gated potassium
channel complex" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015459 "potassium channel regulator activity"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2385129 GO:GO:0005737 GO:GO:0005856
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0008076 GO:GO:0015459 GO:GO:0005216
InterPro:IPR000372 SMART:SM00013 EMBL:AL732309 HSSP:P07359
CTD:389816 HOGENOM:HOG000113367 HOVERGEN:HBG096585 OMA:DAAFSHC
OrthoDB:EOG4V438G EMBL:AK137758 EMBL:AK142669 EMBL:BC024531
EMBL:BC024539 EMBL:BC004853 IPI:IPI00127194 RefSeq:NP_666229.1
UniGene:Mm.275228 ProteinModelPortal:Q91W20 SMR:Q91W20
PhosphoSite:Q91W20 PRIDE:Q91W20 Ensembl:ENSMUST00000028337
GeneID:227618 KEGG:mmu:227618 UCSC:uc008irg.2
GeneTree:ENSGT00700000104083 InParanoid:Q91W20 NextBio:378666
Bgee:Q91W20 CleanEx:MM_LRRC26 Genevestigator:Q91W20 Uniprot:Q91W20
Length = 331
Score = 132 (51.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+++L L H R++++ P AF + L +L+L+EN L V L L +DLS N++
Sbjct: 73 VRSLLLDHNRVSALPPGAFANAG-ALLYLDLRENRLRSVHARAFWGLGVLQWLDLSSNQL 131
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRG-LELNNNLTLYKNS 243
+P +F+ L L L L+ N L L + S G L L L+L NS
Sbjct: 132 ETLPPGTFAPLRALSFLSLAGNRLALLEPSILGPLPLLRVLSLQDNS 178
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/124 (33%), Positives = 66/124 (53%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
++IR I F+ ++ L LS+ +I+ + P+AF+ L +L L L N + ++P
Sbjct: 314 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITELPKSLF 372
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLY 240
L +L L+ L+ NKI + D+F L+NL L L DN L T+ K +F L + L
Sbjct: 373 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLA 432
Query: 241 KNSF 244
+N F
Sbjct: 433 QNPF 436
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 51/167 (30%), Positives = 74/167 (44%)
Query: 89 RNINENTFNGIFIKNLQLSHCRINSITPNAF---RHLDAIRNINENTFN----GIFIKNL 141
RNI NT + L L+ I IT F RHL I + EN + G F
Sbjct: 51 RNIPRNT------ERLDLNGNNITRITKTDFAGLRHL-RILQLMENKISTIERGAFHDLK 103
Query: 142 QLSHCRINSITPNAFRHLEF--TLK--HLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+L R+N F L F T K L+L EN ++ +P + R ++ + L N+I
Sbjct: 104 ELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQI 163
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
I D +F L +L L L++NN+T L SF + L+ N+
Sbjct: 164 SCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNN 210
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 55/193 (28%), Positives = 87/193 (45%)
Query: 41 CICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGI- 99
C CS +T + C+ L L N NT+ LDL N + I I + F G+
Sbjct: 32 CSCSGST-----VDCHGLA---LRIVPRNIPRNTE-RLDL---NGNNITRITKTDFAGLR 79
Query: 100 FIKNLQLSHCRINSITPNAFRHLDAIRNINENTFN-GIF----------IKNLQLSHCRI 148
++ LQL +I++I AF L + + N N +F + L LS +I
Sbjct: 80 HLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQI 139
Query: 149 NSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTL 208
+I AFR +K+L L N + + R L++L ++ L+ N I ++ SF+ +
Sbjct: 140 QAIPRKAFRGA-VDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHM 198
Query: 209 NNLVTLKLSDNNL 221
L T +L NNL
Sbjct: 199 PKLRTFRLHSNNL 211
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 135 (52.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/125 (33%), Positives = 64/125 (51%)
Query: 122 LDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
L+ I++I F+ ++ + LS+ +I+ I P+AF+ L +L L L N + +P
Sbjct: 180 LNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLR-SLNSLVLYGNKITDLPQGV 238
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTL 239
L L L+ L+ NKI I D+F L NL L L DN + +L K +F L L L
Sbjct: 239 FGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 298
Query: 240 YKNSF 244
+N F
Sbjct: 299 AQNPF 303
Score = 124 (48.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+K + LS+ +++ I AF ++ L+L N LE + R L+ L + L N+I
Sbjct: 429 LKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRI 487
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
I +DSF+ L N+ L L DN + T+ +F L+ + L L N F
Sbjct: 488 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF 535
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 55/202 (27%), Positives = 96/202 (47%)
Query: 21 QGGSAQCPWEDESESELQSTCICSYNTANELSIQCND--LTNYPLFKATLNKHVNTKVPL 78
QG + + P S + C CS N + + C LT P A L + + T++ L
Sbjct: 128 QGEAGRTPSCTLSSGSCPAMCACS----NGI-VDCRGKGLTAIP---ANLPEAM-TEIRL 178
Query: 79 DLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
+L + I++I F+ ++ + LS+ +I+ I P+AF+ L R++N G
Sbjct: 179 EL-----NGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGL---RSLNSLVLYG-- 228
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
N +I + F L FTL+ L L N + + ++ + L+NL+L+ L NKI
Sbjct: 229 --N------KITDLPQGVFGGL-FTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKI 279
Query: 198 GKIPDDSFSTLNNLVTLKLSDN 219
+ +F++L + TL L+ N
Sbjct: 280 QSLAKGTFTSLRAIQTLHLAQN 301
Score = 106 (42.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L N VP + L K L L+DLS NKI + + SF+ ++ L TL LS N+L
Sbjct: 628 LYLDGNQFTLVPAQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIP 686
Query: 226 N-SFRGLELNNNLTLYKN 242
+F+GL L+L+ N
Sbjct: 687 PLAFQGLRSLRLLSLHGN 704
Score = 69 (29.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + N+ I I+ ++F G+ ++ L L +I +I+P AF L A+ +N N FN
Sbjct: 477 LRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFN 536
Score = 61 (26.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 83 INNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL 141
++ + I+ I F G +KNLQL +I I AFR A+R + T N I +
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFR---ALRGLEVLTLNNNNITTI 58
Query: 142 QLS 144
+S
Sbjct: 59 PVS 61
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
L ++ + I I E F + ++ L L++ I +I ++F H+ +R ++ N +F
Sbjct: 24 LQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHS-NHLF 80
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 78 LDLLYINNSAIRNINENTFN 97
L++L +NN+ I I ++FN
Sbjct: 45 LEVLTLNNNNITTIPVSSFN 64
>UNIPROTKB|E1BEI7 [details] [associations]
symbol:RTN4RL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:DAAA02048667 IPI:IPI00690499 Ensembl:ENSBTAT00000016317
Uniprot:E1BEI7
Length = 446
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/176 (26%), Positives = 83/176 (47%)
Query: 81 LYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR---HLDAI--------RNIN 129
+++ N+ I + + F+ + L + I I PN F+ HL+ + R +
Sbjct: 59 IFLQNNHITLLRQGHFSPAMV-TLWIYSNNITFIDPNTFQGFVHLEELDLGDNRQLRTLA 117
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
TF G+ + L L C ++++ F L +L++L LQ+N +E + + L NL+
Sbjct: 118 PETFQGLVKLHALYLYKCGLSALPAGIFGGLH-SLQYLYLQDNHIEYLQDDIFVDLVNLS 176
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKNS 243
+ L NK+ + D+F L NL L L +N L ++ +F L L L+ NS
Sbjct: 177 HLFLHGNKLWSLGQDTFRGLVNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNS 232
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 84 NNSAI-RNINENTFNGIFIKNLQLSHCRINSITP---NAFRHLDAIRNINENTFNG-IFI 138
N +AI I E++ IF++N ++ R +P + + + I I+ NTF G + +
Sbjct: 44 NFAAIPEGIPEDS-ERIFLQNNHITLLRQGHFSPAMVTLWIYSNNITFIDPNTFQGFVHL 102
Query: 139 KNLQLSHCR-INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+ L L R + ++ P F+ L L L L + L +P L +L + L N I
Sbjct: 103 EELDLGDNRQLRTLAPETFQGL-VKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHI 161
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSFR 245
+ DD F L NL L L N L +L +++FRGL + L L++N +
Sbjct: 162 EYLQDDIFVDLVNLSHLFLHGNKLWSLGQDTFRGLVNLDRLLLHENQLQ 210
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 84 NNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI--NENTF----NGI 136
+N +R + TF G+ + L L C ++++ F L +++ + +N + I
Sbjct: 109 DNRQLRTLAPETFQGLVKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDI 168
Query: 137 FIKNLQLSHCRIN-----SITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLID 191
F+ + LSH ++ S+ + FR L L L L EN L+ V + L+ LT +
Sbjct: 169 FVDLVNLSHLFLHGNKLWSLGQDTFRGL-VNLDRLLLHENQLQWVHHKAFHDLRRLTTLF 227
Query: 192 LSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L N + ++P D + L L L+L+ N
Sbjct: 228 LFNNSLSELPGDCLAPLGALEFLRLNGN 255
>TAIR|locus:2009288 [details] [associations]
symbol:AT1G34420 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA;ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0009627 "systemic
acquired resistance" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009863 "salicylic acid
mediated signaling pathway" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0045087 "innate
immune response" evidence=RCA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000719 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 SUPFAM:SSF56112
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0004672
InterPro:IPR025875 Pfam:PF12799 EMBL:AC023279 EMBL:AC023913
HOGENOM:HOG000116551 EMBL:FJ708646 IPI:IPI00522960
RefSeq:NP_174702.1 UniGene:At.51931 ProteinModelPortal:Q9LNK3
SMR:Q9LNK3 STRING:Q9LNK3 PRIDE:Q9LNK3 EnsemblPlants:AT1G34420.1
GeneID:840345 KEGG:ath:AT1G34420 TAIR:At1g34420 InParanoid:Q9LNK3
OMA:VMVPLAY ProtClustDB:CLSN2720516 Genevestigator:Q9LNK3
Uniprot:Q9LNK3
Length = 966
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 12 TLILLTALIQGGSAQCPWEDESESELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKH 71
T+I L++ + P + + +CS + S+ L+N+ L ++
Sbjct: 46 TMIELSSFLNISDWNLPGSERNPCSWNGV-LCSL--PDNSSVISLSLSNFDLSNSSFLPL 102
Query: 72 VNTKVPLDLLYINNSAIRNINE----NTFNGIFIKNLQLSHCRINSITPNA--------- 118
V L+ L ++N+ + +I E N I +K+L S + S +P
Sbjct: 103 VCNLQTLESLDVSNNRLSSIPEGFVTNCERLIALKHLNFSTNKF-STSPGFRGFSKLAVL 161
Query: 119 -FRHLDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQV 176
F H N+ + F+G+ +++L LS R+ P HL +L+ L + +N L
Sbjct: 162 DFSHNVLSGNVGDYGFDGLVQLRSLNLSFNRLTGSVPV---HLTKSLEKLEVSDNSLSGT 218
Query: 177 PVETLRHLKNLTLIDLSKNKI-GKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELN 234
E ++ + LTLIDLS N++ G IP S L+ L +L LS+N L+ L S ++
Sbjct: 219 IPEGIKDYQELTLIDLSDNQLNGSIPS-SLGNLSKLESLLLSNNYLSGLIPESLSSIQTL 277
Query: 235 NNLTLYKNSFRG 246
+N F G
Sbjct: 278 RRFAANRNRFTG 289
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 134 (52.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 122 LDAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
L+ I++I F+ ++ + LS+ +I+ I P+AF+ L +L L L N + +P
Sbjct: 182 LNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLR-SLNSLVLYGNKITDLPRGV 240
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTL 239
L L L+ L+ NKI + D+F L NL L L DN + L K +F L L L
Sbjct: 241 FGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHL 300
Query: 240 YKNSF 244
+N F
Sbjct: 301 AQNPF 305
Score = 122 (48.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 138 IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI 197
+K + LS+ +++ I AF ++ L+L N LE + R L L + L N+I
Sbjct: 430 LKKINLSNNKVSEIEDGAFEGAA-SVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRI 488
Query: 198 GKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
I +DSF+ L N+ L L DN + T+ +F L+ + L L N F
Sbjct: 489 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF 536
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 148 INSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFST 207
I SI P AF L+ ++L N + ++ + + L++L + L NKI +P F
Sbjct: 185 IKSIPPGAFSPYR-KLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGG 243
Query: 208 LNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNSFRG 246
L L L L+ N + + ++F+ L+ + L+LY N +G
Sbjct: 244 LFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQG 283
Score = 99 (39.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 166 LNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK 225
L L N VP + L K L L+DLS NKI + + SF+ ++ L TL LS N L
Sbjct: 629 LYLDGNQFMLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIP 687
Query: 226 N-SFRGLELNNNLTLYKN 242
+F+GL L+L+ N
Sbjct: 688 PLAFQGLRSLRLLSLHGN 705
Score = 69 (29.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN--ENTFN 134
L L + N+ I I+ ++F G+ ++ L L +I +I+P AF L A+ +N N FN
Sbjct: 478 LRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFN 537
Score = 63 (27.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 83 INNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL 141
++ + I+ I F G +KNLQL +I+ I AFR A+R + T N I +
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFR---ALRGLEVLTLNNNNISTI 60
Query: 142 QLS 144
+S
Sbjct: 61 PVS 63
Score = 49 (22.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIF 137
L ++ + I I E F + ++ L L++ I++I ++F H+ +R ++ N +F
Sbjct: 26 LQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHS-NHLF 82
Score = 39 (18.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 78 LDLLYINNSAIRNINENTFN 97
L++L +NN+ I I ++FN
Sbjct: 47 LEVLTLNNNNISTIPVSSFN 66
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN + KI +F+ L +L TL+L DN LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 149 VPTQAFEYLSKLRELWLRNN 168
Score = 132 (51.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NEN--- 131
L++L ++ + +R I FNG+ + L+L R+ ++ AF +L +R + N
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 132 -----TFNGI-FIKNLQLSHC-RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
FN + ++ L L R+ I+ AF L L++LNL +L+ +P L L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL-VNLRYLNLGMCNLKDIP--NLTAL 228
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
L ++LS N++ I SF L +L L L + T+ +N+F L+ L L N+
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN + KI +F+ L +L TL+L DN LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 149 VPTQAFEYLSKLRELWLRNN 168
Score = 132 (51.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NEN--- 131
L++L ++ + +R I FNG+ + L+L R+ ++ AF +L +R + N
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 132 -----TFNGI-FIKNLQLSHC-RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
FN + ++ L L R+ I+ AF L L++LNL +L+ +P L L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL-VNLRYLNLGMCNLKDIP--NLTAL 228
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
L ++LS N++ I SF L +L L L + T+ +N+F L+ L L N+
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN + KI +F+ L +L TL+L DN LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 149 VPTQAFEYLSKLRELWLRNN 168
Score = 132 (51.5 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NEN--- 131
L++L ++ + +R I FNG+ + L+L R+ ++ AF +L +R + N
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 132 -----TFNGI-FIKNLQLSHC-RINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
FN + ++ L L R+ I+ AF L L++LNL +L+ +P L L
Sbjct: 172 SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL-VNLRYLNLGMCNLKDIP--NLTAL 228
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNS 243
L ++LS N++ I SF L +L L L + T+ +N+F L+ L L N+
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 KHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTL 223
++LNLQEN ++ + +T +HL++L ++ LSKN + KI +F+ L +L TL+L DN LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 224 -------YKNSFRGLELNNN 236
Y + R L L NN
Sbjct: 149 VPTQAFEYLSKLRELWLRNN 168
>RGD|619769 [details] [associations]
symbol:Fmod "fibromodulin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042060
"wound healing" evidence=IEP] [GO:0042476 "odontogenesis"
evidence=IEP] InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
RGD:619769 GO:GO:0005576 GO:GO:0005615 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 GO:GO:0042060
GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0042476 CTD:2331 HOGENOM:HOG000234447 HOVERGEN:HBG108061
KO:K08121 OrthoDB:EOG4CJVHR PANTHER:PTHR24371:SF11 EMBL:X82152
IPI:IPI00200225 RefSeq:NP_542429.1 UniGene:Rn.8778
ProteinModelPortal:P50609 STRING:P50609 PRIDE:P50609 GeneID:64507
KEGG:rno:64507 UCSC:RGD:619769 InParanoid:P50609 NextBio:613278
Genevestigator:P50609 GermOnline:ENSRNOG00000003183 Uniprot:P50609
Length = 376
Score = 132 (51.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 52/194 (26%), Positives = 92/194 (47%)
Query: 54 QCNDLTNYPLFKATLNKHVNTK--VP--LDLLYINNSAIRNINENTFNG------IFIKN 103
+C+ N+P N+++ VP + +Y N+ I I E F+ I +
Sbjct: 79 ECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQIAAIQEGVFDNATGLLWIALHG 138
Query: 104 LQLSHCRINSITPNAFRHLDAIRNINENTFNGI------FIKNLQLSHCRINSITPNAFR 157
Q++ +I + RHL+ + ++ N + ++ L L H +I+ + NA
Sbjct: 139 NQITSDKIGRKVFSKLRHLERLY-LDHNNLTRMPGPLPRSLRELHLDHNQISRVPNNALE 197
Query: 158 HLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLS 217
LE L L L N++++V ++R L++L L+DLS N + ++PD S L L L
Sbjct: 198 GLE-NLTALYLHHNEIQEVG-SSMRGLRSLILLDLSYNHLRRVPDGLPSALEQLY---LE 252
Query: 218 DNNL-TLYKNSFRG 230
NN+ T+ + FRG
Sbjct: 253 HNNVYTVPDSYFRG 266
>UNIPROTKB|Q9GKN8 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447 HOVERGEN:HBG108061
EMBL:AF163568 IPI:IPI00710385 RefSeq:NP_776859.1 UniGene:Bt.3202
ProteinModelPortal:Q9GKN8 STRING:Q9GKN8 PRIDE:Q9GKN8 GeneID:282000
KEGG:bta:282000 CTD:5549 InParanoid:Q9GKN8 KO:K08125
OrthoDB:EOG44F69H NextBio:20805868 PANTHER:PTHR24371:SF15
Uniprot:Q9GKN8
Length = 381
Score = 132 (51.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 40/119 (33%), Positives = 64/119 (53%)
Query: 130 ENTFNGIFIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTL 189
E+ N ++ + L + RI + L +L L L++N LE+VP R+L+ L L
Sbjct: 119 ESFKNATGLRWINLDNNRIRKVDQRVLEKLP-SLVFLYLEKNQLEEVPAALPRNLEQLRL 177
Query: 190 IDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT--LYK-NSFRGLELNNNLTLYKNSFR 245
S+N+I +IP FS L NL+ L L N L+ ++K ++F+GL+ L L N+ R
Sbjct: 178 ---SQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQGLKNLMQLNLAHNTLR 233
Score = 114 (45.2 bits), Expect = 0.00041, P = 0.00041
Identities = 51/207 (24%), Positives = 95/207 (45%)
Query: 49 NELSIQCNDLTNYPLFKATLNKHVNTKVP-LDLLYINNSAIRNINENTFNGIFIKNLQLS 107
N ++ +L N + K +++ V K+P L LY+ + + + + + L+LS
Sbjct: 123 NATGLRWINLDNNRIRK--VDQRVLEKLPSLVFLYLEKNQLEEVPAALPRNL--EQLRLS 178
Query: 108 HCRINSITPNAFRHLD--AIRNINENTFN-GIF-------IKNLQ---LSHCRINSITPN 154
+I+ I P F L+ + ++ N + G+F +KNL L+H + + P
Sbjct: 179 QNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQGLKNLMQLNLAHNTLRKMPPK 238
Query: 155 AFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGK--IPDDSFSTLNNLV 212
+ + L L N +E +P + NL I L+ N++ +P +SF+ ++NL+
Sbjct: 239 ----VPSAIHQLYLDSNRIEAIPSGYFKGFPNLAFIRLNYNQLSDRGLPKNSFN-ISNLL 293
Query: 213 TLKLSDNNLT---LYKNSFRGLELNNN 236
L LS N ++ + L LNNN
Sbjct: 294 VLHLSHNRISSVPAISSRLEHLYLNNN 320
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 54/178 (30%), Positives = 76/178 (42%)
Query: 78 LDLLYINNSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLDAIRNI--NENTFN 134
L L ++N+A+ + + F + ++ L L I+ + P F L + + N
Sbjct: 195 LQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAIT 254
Query: 135 ----GIF--IKNLQLSHCRINS--ITP-NAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
IF + NL + N + P F H L L+L N LE V T HL
Sbjct: 255 HLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTP-CLVGLSLTHNQLETVAEGTFAHLS 313
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
NL + LS N I +P F L LV L L NNLT L+ F+ L L+L KN
Sbjct: 314 NLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKN 371
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 30/97 (30%), Positives = 58/97 (59%)
Query: 127 NINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLK 185
N++ N F+ + + L L+ + ++ F+HL L+ L+LQ N L+ +P + L
Sbjct: 111 NLSTNIFSNLTSLGKLTLNFNMLEALPEGLFQHLA-ALESLHLQGNQLQALPRRLFQPLT 169
Query: 186 NLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT 222
+L ++L++N + ++P++ F L +L TLKLS+N L+
Sbjct: 170 HLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALS 206
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 49/189 (25%), Positives = 82/189 (43%)
Query: 50 ELSIQCNDLTNYP------LF---KATLNKHVNTKVPLDLLY-INNSAIRNINENTFN-- 97
EL + N+++ P LF + L ++ T +PL + + N ++ N
Sbjct: 221 ELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVL 280
Query: 98 --GIF-----IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNLQLSHCRINS 150
G+F + L L+H ++ ++ F HL +R+ L LS+ I
Sbjct: 281 PAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRS-------------LMLSYNAITH 327
Query: 151 ITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNN 210
+ FR LE +K L L N+L + ++L L L+ LSKN++ +P+ F T N
Sbjct: 328 LPAGIFRDLEELVK-LYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYN 386
Query: 211 LVTLKLSDN 219
L L L N
Sbjct: 387 LFNLALHGN 395
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 137 (53.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 41/124 (33%), Positives = 66/124 (53%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
++IR I F+ ++ L LS+ +I+ + P+AF+ L +L L L N + ++P
Sbjct: 228 NSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLR-SLNSLVLYGNKITELPKSLF 286
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLY 240
L +L L+ L+ NKI + D+F L+NL L L DN L T+ K +F L + L
Sbjct: 287 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLA 346
Query: 241 KNSF 244
+N F
Sbjct: 347 QNPF 350
Score = 107 (42.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 146 CRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSF 205
CR +T +L T+ + L++N + +P K L +DLS N+I ++ D+F
Sbjct: 204 CRGKGLTEIP-TNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAF 262
Query: 206 STLNNLVTLKLSDNNLT-LYKNSFRGL 231
L +L +L L N +T L K+ F GL
Sbjct: 263 QGLRSLNSLVLYGNKITELPKSLFEGL 289
Score = 71 (30.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 81 LYINNSAIRNINENTFNG-IFIKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIK 139
L ++ + I+ I F G + IKNLQL + +I+ I AFR A+R++ T N I
Sbjct: 46 LDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFR---ALRDLEVLTLNNNNIT 102
Query: 140 NLQLS 144
L ++
Sbjct: 103 RLSVA 107
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 78 LDLLYINNSAIRNINENTFN 97
L++L +NN+ I ++ +FN
Sbjct: 91 LEVLTLNNNNITRLSVASFN 110
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 52/177 (29%), Positives = 80/177 (45%)
Query: 80 LLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------HLDA--IRNIN 129
++Y + A +I EN G + L L I + N F +LD I +++
Sbjct: 44 IVYCESHAFADIPENISGGS--QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVD 101
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+ F GI +K L LS +I + F H L++L+L N L+ + E + L+ L
Sbjct: 102 EDAFQGIRRLKELILSSNKITYLHNKTF-HPVPNLRNLDLSYNKLQTLQSEQFKGLRKLI 160
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
++ L N + +P F NL L L N L +L +N+F GL L L N F
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQF 217
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/187 (30%), Positives = 84/187 (44%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
EL + N +T Y L T + N + LDL Y + ++ + F G+ + L + H
Sbjct: 113 ELILSSNKIT-Y-LHNKTFHPVPNLR-NLDLSY---NKLQTLQSEQFKGL--RKLIILHL 164
Query: 110 RINSI--TP-NAF---RHLD-------AIRNINENTFNGIF-IKNLQLSHCRINSITPNA 155
R NS+ P F R+LD +R+++ N F G+ +K L L H + + I
Sbjct: 165 RSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAH 224
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
F L F L+ + LQ N + V +L +DLS N I I +F L NL L
Sbjct: 225 FPRL-FNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLN 283
Query: 216 LSDNNLT 222
L N LT
Sbjct: 284 LDSNKLT 290
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI-FI 138
LY++++ I +++E+ F GI +K L LS N IT + H TF+ + +
Sbjct: 90 LYLDHNYISSVDEDAFQGIRRLKELILSS---NKIT---YLH--------NKTFHPVPNL 135
Query: 139 KNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIG 198
+NL LS+ ++ ++ F+ L L L+L+ N L+ VP+ + +NL +DL N++
Sbjct: 136 RNLDLSYNKLQTLQSEQFKGLR-KLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLR 194
Query: 199 KIPDDSFSTLNNLVTLKLSDNNLT 222
+ ++F+ L L L L N +
Sbjct: 195 SLSRNAFAGLLKLKELHLEHNQFS 218
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
LD L + + +R+++ N F G+ +K L L H + + I F H + FN
Sbjct: 183 LDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKIN---FAHFPRL-------FN-- 230
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++++ L RI S++ +L L+L ND++ + T + L NL ++L NK
Sbjct: 231 -LRSIYLQWNRIRSVS-QGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNK 288
Query: 197 IGKIPDDSFSTLNNLVTLKLSDN 219
+ + ++ + +L+++ LS N
Sbjct: 289 LTNVSQETVNAWISLISITLSGN 311
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 52/177 (29%), Positives = 80/177 (45%)
Query: 80 LLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------HLDA--IRNIN 129
++Y + A +I EN G + L L I + N F +LD I +++
Sbjct: 44 IVYCESHAFADIPENISGGS--QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVD 101
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+ F GI +K L LS +I + F H L++L+L N L+ + E + L+ L
Sbjct: 102 EDAFQGIRRLKELILSSNKITYLHNKTF-HPVPNLRNLDLSYNKLQTLQSEQFKGLRKLI 160
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
++ L N + +P F NL L L N L +L +N+F GL L L N F
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQF 217
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/187 (30%), Positives = 84/187 (44%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
EL + N +T Y L T + N + LDL Y + ++ + F G+ + L + H
Sbjct: 113 ELILSSNKIT-Y-LHNKTFHPVPNLR-NLDLSY---NKLQTLQSEQFKGL--RKLIILHL 164
Query: 110 RINSI--TP-NAF---RHLD-------AIRNINENTFNGIF-IKNLQLSHCRINSITPNA 155
R NS+ P F R+LD +R+++ N F G+ +K L L H + + I
Sbjct: 165 RSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAH 224
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
F L F L+ + LQ N + V +L +DLS N I I +F L NL L
Sbjct: 225 FPRL-FNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLN 283
Query: 216 LSDNNLT 222
L N LT
Sbjct: 284 LDSNKLT 290
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI-FI 138
LY++++ I +++E+ F GI +K L LS N IT + H TF+ + +
Sbjct: 90 LYLDHNYISSVDEDAFQGIRRLKELILSS---NKIT---YLH--------NKTFHPVPNL 135
Query: 139 KNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIG 198
+NL LS+ ++ ++ F+ L L L+L+ N L+ VP+ + +NL +DL N++
Sbjct: 136 RNLDLSYNKLQTLQSEQFKGLR-KLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLR 194
Query: 199 KIPDDSFSTLNNLVTLKLSDNNLT 222
+ ++F+ L L L L N +
Sbjct: 195 SLSRNAFAGLLKLKELHLEHNQFS 218
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
LD L + + +R+++ N F G+ +K L L H + + I F H + FN
Sbjct: 183 LDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKIN---FAHFPRL-------FN-- 230
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++++ L RI S++ +L L+L ND++ + T + L NL ++L NK
Sbjct: 231 -LRSIYLQWNRIRSVS-QGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNK 288
Query: 197 IGKIPDDSFSTLNNLVTLKLSDN 219
+ + ++ + +L+++ LS N
Sbjct: 289 LTNVSQETVNAWISLISITLSGN 311
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 52/177 (29%), Positives = 80/177 (45%)
Query: 80 LLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFR--------HLDA--IRNIN 129
++Y + A +I EN G + L L I + N F +LD I +++
Sbjct: 44 IVYCESHAFADIPENISGGS--QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVD 101
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+ F GI +K L LS +I + F H L++L+L N L+ + E + L+ L
Sbjct: 102 EDAFQGIRRLKELILSSNKITYLHNKTF-HPVPNLRNLDLSYNKLQTLQSEQFKGLRKLI 160
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL-TLYKNSFRGLELNNNLTLYKNSF 244
++ L N + +P F NL L L N L +L +N+F GL L L N F
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQF 217
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI-FI 138
LY++++ I +++E+ F GI +K L LS N IT + H TF+ + +
Sbjct: 90 LYLDHNYISSVDEDAFQGIRRLKELILSS---NKIT---YLH--------NKTFHPVPNL 135
Query: 139 KNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIG 198
+NL LS+ ++ ++ F+ L L L+L+ N L+ VP+ + +NL +DL N++
Sbjct: 136 RNLDLSYNKLQTLQSEQFKGLR-KLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLR 194
Query: 199 KIPDDSFSTLNNLVTLKLSDNNLT 222
+ ++F+ L L L L N +
Sbjct: 195 SLSRNAFAGLLKLKELHLEHNQFS 218
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 56/187 (29%), Positives = 84/187 (44%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
EL + N +T Y L T + N + LDL Y + ++ + F G+ + L + H
Sbjct: 113 ELILSSNKIT-Y-LHNKTFHPVPNLR-NLDLSY---NKLQTLQSEQFKGL--RKLIILHL 164
Query: 110 RINSI--TP-NAF---RHLD-------AIRNINENTFNGIF-IKNLQLSHCRINSITPNA 155
R NS+ P F R+LD +R+++ N F G+ +K L L H + + I
Sbjct: 165 RSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAH 224
Query: 156 FRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK 215
F L F L+ + LQ N + + +L +DLS N I I +F L NL L
Sbjct: 225 FPRL-FNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLN 283
Query: 216 LSDNNLT 222
L N LT
Sbjct: 284 LDSNKLT 290
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 38/143 (26%), Positives = 71/143 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
LD L + + +R+++ N F G+ +K L L H + + I F H + FN
Sbjct: 183 LDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKIN---FAHFPRL-------FN-- 230
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++++ L RI SI+ +L +L+L ND++ + T + L NL ++L NK
Sbjct: 231 -LRSIYLQWNRIRSIS-QGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNK 288
Query: 197 IGKIPDDSFSTLNNLVTLKLSDN 219
+ I ++ + +L+++ LS N
Sbjct: 289 LTNISQETVNAWISLISITLSGN 311
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 51/159 (32%), Positives = 77/159 (48%)
Query: 78 LDLLYINNSAIRNINENTFNGIFIKNLQLSHCRINSITPNAFRHLDAIRN-----INENT 132
L LYIN++ I I+ + F G+ KNL H N + R D+ N I EN
Sbjct: 145 LQELYINHNQISTISAHAFAGL--KNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENP 202
Query: 133 FNGIF---------IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
GI +++L L+ + I NA L+ +L+ L+ +N L +VP L+
Sbjct: 203 VIGILDMNFKPLANLRSLVLAGMYLTDIPGNALVGLD-SLESLSFYDNKLVKVPQLALQK 261
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLK-LSDNNL 221
+ NL +DL+KN I KI + F N++ LK L NN+
Sbjct: 262 VPNLKFLDLNKNPIHKIQEGDFK---NMLRLKELGINNM 297
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIR------N----IN 129
L + ++ I + F N + +L LS I+ I P+AF L ++R N IN
Sbjct: 56 LRLTDNFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVIN 115
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
N G+ +++L L + +I+ I ++F T++ L+L N+L +P E + + N+
Sbjct: 116 SNQLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNIN 175
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N I I +F+ L LV L ++ N L
Sbjct: 176 TLTLDHNLIDHIGVGTFTLLTKLVRLDMTSNRL 208
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 46/164 (28%), Positives = 81/164 (49%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGI 136
L L+++++ I + E++F G++ +K L LS +I + F L +N
Sbjct: 92 LTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQL-----LN------- 139
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
++NL LS +++S+ P L L+ L+L+ N L +PV ++L +DLS N+
Sbjct: 140 -LQNLDLSFNQLSSLHPELLYGLR-KLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNR 197
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNNNLTLY 240
+ + + F+ L L L L N LT N L L++ TL+
Sbjct: 198 LRSLARNGFAGLIKLRELHLEHNQLTKI-NFAHFLRLSSLHTLF 240
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 123 DAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETL 181
+++ + F G+ + L L H I S+ +AF+ L +K L L N + Q+P T
Sbjct: 75 NSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLR-RVKELTLSSNQITQLPNTTF 133
Query: 182 RHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLT-----LYKN--SFRGLELN 234
R + NL +DLS NK+ + D F L L TL + N + ++++ S + L++
Sbjct: 134 RPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIG 193
Query: 235 -NNL-TLYKNSFRG 246
N L +L +NSF G
Sbjct: 194 YNQLKSLARNSFAG 207
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 37/153 (24%), Positives = 77/153 (50%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNI----NENTF-- 133
L + +++ + F G+ + L L H I S+ +AF+ L ++ + N+ T
Sbjct: 70 LSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLP 129
Query: 134 NGIF-----IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
N F ++++ LS+ ++ ++ P+ F L L L+++ N ++ VPV + ++L
Sbjct: 130 NTTFRPMPNLRSVDLSYNKLQALAPDLFHGLR-KLTTLHMRANAIQFVPVRIFQDCRSLK 188
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+D+ N++ + +SF+ L L L L N+L
Sbjct: 189 FLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL 221
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 58/213 (27%), Positives = 99/213 (46%)
Query: 50 ELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINENTFNGIFIKNLQLSHC 109
EL++ N +T P T N + +DL Y + ++ + + F+G+ + L H
Sbjct: 117 ELTLSSNQITQLP--NTTFRPMPNLR-SVDLSY---NKLQALAPDLFHGL--RKLTTLHM 168
Query: 110 RINSI--TP-------NAFRHLDA----IRNINENTFNGIF-IKNLQLSHCRINSITPNA 155
R N+I P + + LD ++++ N+F G+F + L L H N +
Sbjct: 169 RANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEH---NDLVKVN 225
Query: 156 FRHLE--FTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVT 213
F H +L L L+ N + V V +L + NL +DLS N+I + F T+ +L +
Sbjct: 226 FAHFPRLISLHSLCLRRNKVAIV-VSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPHLQS 284
Query: 214 LKLSDNNLTLYK----NSFRGLELNNNLTLYKN 242
L+L N LT + NS++ L ++TL N
Sbjct: 285 LQLDSNRLTYIEPRILNSWKSL---TSITLAGN 314
>RGD|620984 [details] [associations]
symbol:Lum "lumican" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005518 "collagen
binding" evidence=IEA;ISO] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISO;IDA] [GO:0005583 "fibrillar collagen"
evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEP] [GO:0070848 "response to growth factor
stimulus" evidence=IEP] [GO:0031012 "extracellular matrix"
evidence=ISO] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
RGD:620984 GO:GO:0005615 GO:GO:0005578 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0014070 GO:GO:0051216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0070848
GO:GO:0005583 GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:X84039 EMBL:BC061878 IPI:IPI00206403
PIR:S52284 RefSeq:NP_112312.1 UniGene:Rn.3087
ProteinModelPortal:P51886 STRING:P51886 PRIDE:P51886
Ensembl:ENSRNOT00000006109 GeneID:81682 KEGG:rno:81682
UCSC:RGD:620984 InParanoid:P51886 NextBio:615304
Genevestigator:P51886 GermOnline:ENSRNOG00000004610 Uniprot:P51886
Length = 338
Score = 130 (50.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 61/197 (30%), Positives = 95/197 (48%)
Query: 54 QCNDLTNYP--LFKATLNKHVNTKVP--LDLLYINNSAIRNINENTFNGIF-IKNLQLSH 108
+CN +YP ++ L VP + LY+ N+ I +I+E F + ++ L L H
Sbjct: 40 ECNCPHSYPTAMYCDDLKLKSVPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDH 99
Query: 109 CRI-NS-ITPNAFRHLDAIR--NINENTFN---GIFIKNLQLSHCRINSITP-NAFRHLE 160
+ NS I F L ++ +IN N G K+LQ N I+ +F L
Sbjct: 100 NLLENSKIKGKVFSKLKQLKKLHINYNNLTESVGPLPKSLQDLQLANNKISKLGSFDGL- 158
Query: 161 FTLKHLNLQENDLEQVPVE-TLRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDN 219
L + LQ N L++ V +L+ LK+L +DLS N++ K+P T +L+TL L +N
Sbjct: 159 VNLTFIYLQHNQLKEEAVSASLKGLKSLEYLDLSFNQMSKLPA-GLPT--SLLTLYLDNN 215
Query: 220 NLTL----YKNSFRGLE 232
+T Y N F GL+
Sbjct: 216 KITNIPDEYFNRFTGLQ 232
>MGI|MGI:1917780 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:1917780
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 EMBL:CH466559 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:57497
eggNOG:NOG311542 KO:K16355 OMA:HWVAPDD OrthoDB:EOG469QT6
EMBL:AK017594 EMBL:AK044375 EMBL:AK122476 EMBL:BC139418
IPI:IPI00330152 RefSeq:NP_081728.2 UniGene:Mm.133607
ProteinModelPortal:Q80TG9 SMR:Q80TG9 IntAct:Q80TG9 STRING:Q80TG9
PhosphoSite:Q80TG9 PRIDE:Q80TG9 Ensembl:ENSMUST00000046254
GeneID:70530 KEGG:mmu:70530 UCSC:uc008cyd.2 InParanoid:Q80TG9
NextBio:331801 Bgee:Q80TG9 Genevestigator:Q80TG9
GermOnline:ENSMUSG00000040490 Uniprot:Q80TG9
Length = 788
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 41/153 (26%), Positives = 79/153 (51%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN---------- 129
L + + I +I F N + +L LS I+ I P +F L+++R+++
Sbjct: 57 LRLGGNFIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLG 116
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+T G+ +++L +++ ++ I +AF TL+ L+L N+L +P +++R + NL
Sbjct: 117 EDTLRGLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLH 176
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N + I + +F+ L L L L+ N L
Sbjct: 177 QLSLDHNLLDHIAEGTFADLQKLARLDLTSNRL 209
>RGD|1311831 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1311831 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 HOGENOM:HOG000237343 HOVERGEN:HBG052352
eggNOG:NOG311542 OrthoDB:EOG469QT6 EMBL:DQ070869 IPI:IPI00371727
UniGene:Rn.47365 ProteinModelPortal:Q460M5 IntAct:Q460M5
STRING:Q460M5 UCSC:RGD:1311831 InParanoid:Q460M5
Genevestigator:Q460M5 Uniprot:Q460M5
Length = 788
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 41/153 (26%), Positives = 79/153 (51%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN---------- 129
L + + I +I F N + +L LS I+ I P +F L+++R+++
Sbjct: 57 LRLGGNFIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLG 116
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+T G+ +++L +++ ++ I +AF TL+ L+L N+L +P +++R + NL
Sbjct: 117 EDTLRGLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLH 176
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N + I + +F+ L L L L+ N L
Sbjct: 177 QLSLDHNLLDHIAEGTFADLQKLARLDLTSNRL 209
>UNIPROTKB|Q9ULH4 [details] [associations]
symbol:LRFN2 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HOGENOM:HOG000237343 HOVERGEN:HBG052352 EMBL:AB033072 EMBL:AK291474
EMBL:AL591063 EMBL:BC142616 IPI:IPI00008107 RefSeq:NP_065788.1
UniGene:Hs.250015 ProteinModelPortal:Q9ULH4 SMR:Q9ULH4
STRING:Q9ULH4 PhosphoSite:Q9ULH4 DMDM:62286951 PaxDb:Q9ULH4
PRIDE:Q9ULH4 Ensembl:ENST00000338305 GeneID:57497 KEGG:hsa:57497
UCSC:uc003oph.1 CTD:57497 GeneCards:GC06M040406 HGNC:HGNC:21226
HPA:HPA013653 MIM:612808 neXtProt:NX_Q9ULH4 PharmGKB:PA134913285
eggNOG:NOG311542 InParanoid:Q9ULH4 KO:K16355 OMA:HWVAPDD
OrthoDB:EOG469QT6 ChiTaRS:LRFN2 GenomeRNAi:57497 NextBio:63812
Bgee:Q9ULH4 CleanEx:HS_LRFN2 Genevestigator:Q9ULH4
GermOnline:ENSG00000156564 Uniprot:Q9ULH4
Length = 789
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 41/153 (26%), Positives = 79/153 (51%)
Query: 81 LYINNSAIRNINENTF-NGIFIKNLQLSHCRINSITPNAFRHLDAIRNIN---------- 129
L + + I +I+ F N + +L LS I+ I P +F L+++R+++
Sbjct: 57 LRLGGNFIIHISRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLG 116
Query: 130 ENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLT 188
E+T G+ +++L +++ ++ I AF TL+ L+L N+L +P +++R + NL
Sbjct: 117 EDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLH 176
Query: 189 LIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNL 221
+ L N + I + +F+ L L L L+ N L
Sbjct: 177 QLSLDHNLLDHIAEGTFADLQKLARLDLTSNRL 209
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 54/180 (30%), Positives = 87/180 (48%)
Query: 80 LLYIN---NSAIRNINENTFNGI-FIKNLQLSHCRINSITPNAFRHLD--AIRNINENTF 133
LL+++ NS + ++N++ FN + ++ L L+ C+++ I+ + L I +++ N F
Sbjct: 369 LLFLDLGQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKF 428
Query: 134 NGI--F----IKNLQLSHCRINSITP-N--AFRHLEFTLKHLNLQENDLEQVPVETLRHL 184
F +K L+ N IT N AF L F+LK LNL + + +
Sbjct: 429 KSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGL-FSLKELNLAACWIVTIDRYSFTQF 487
Query: 185 KNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYK-NSFRGLELNNNLTLYKNS 243
NL ++DL N I + +F L L TL LS N L + + N+F GL L L NS
Sbjct: 488 PNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNS 547
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/173 (29%), Positives = 84/173 (48%)
Query: 73 NTKVPLDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAI------ 125
N L L +N + I+ T++ + + L LSH + S AF L +
Sbjct: 389 NALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLS 448
Query: 126 RN----INENTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVET 180
RN +N F+G+F +K L L+ C I +I +F L+ L+L +N++ + T
Sbjct: 449 RNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFP-NLEVLDLGDNNIRTLNHGT 507
Query: 181 LRHLKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLY-KNSFRGLE 232
+ LK L + LS N++ + ++FS L L L L N+L+ + K+ F GLE
Sbjct: 508 FQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLE 560
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/107 (34%), Positives = 63/107 (58%)
Query: 137 FIKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNK 196
+ +L L++ I + P +F +L L L L+ N + ++ R L+NLTL++L +NK
Sbjct: 100 YTTHLNLTNNYIQVLPPWSFTNLS-ALVDLRLEWNLIWKIDEGAFRGLENLTLLNLVENK 158
Query: 197 IGKIPDDSFSTLNNLVTLKLSDNNLT-LYKNSFRGLELNNNLTLYKN 242
I + ++SF L+NL TL LS N +T ++K++F L L+L +N
Sbjct: 159 IQSV-NNSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRN 204
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 56/169 (33%), Positives = 88/169 (52%)
Query: 78 LDLLYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAF------RHLDAIRNINE 130
L LL + + I+++N N+F G+ ++ L LSH +I I +AF ++L RN
Sbjct: 149 LTLLNLVENKIQSVN-NSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRIS 207
Query: 131 NTFNGIF--IKNLQ-LSHCRI--NSIT--PNAFRHLEFTLKHLNLQENDLEQVPVETLRH 183
N F+GI +++L L H + NSI ++ R L +L HL+ + N+L ++ TL
Sbjct: 208 N-FSGILEAVQHLPCLEHLDLINNSIMYLDHSPRSL-VSLTHLSFEGNNLTELNFSTLS- 264
Query: 184 LKNLTLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLE 232
L NLT + S+N G I D TL L +L LS + L S + L+
Sbjct: 265 LPNLTNLSASQNGHGVIQDVYLKTLPQLQSLNLSGTVVKLEMLSAKHLQ 313
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 50/146 (34%), Positives = 73/146 (50%)
Query: 101 IKNLQLSHCRIN-SITPNAFRHLDAIRNI--NENTFNGIFIKNLQLSHC-RIN--SITPN 154
+ N +L H +N I R+L + + ++N N IK QL+ C R+ + N
Sbjct: 320 LSNRELKHGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIK--QLAKCTRLLFLDLGQN 377
Query: 155 A-FRHL---EF----TLKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKIGKIPDDSFS 206
+ HL EF +L+ LNL + L + +T L+NLT++DLS NK PD +FS
Sbjct: 378 SDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFS 437
Query: 207 TLNNLVTLKLSDNNLTLYKN-SFRGL 231
L L L LS N +T N +F GL
Sbjct: 438 PLKRLEFLSLSRNPITELNNLAFSGL 463
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 54/177 (30%), Positives = 86/177 (48%)
Query: 81 LYINNSAIRNINENTFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNIN---------E 130
L + N+ I+ + +F + + +L+L I I AFR L+ + +N
Sbjct: 104 LNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAFRGLENLTLLNLVENKIQSVN 163
Query: 131 NTFNGIF-IKNLQLSHCRINSITPNAFRHLEFTLKHLNLQENDLEQVP--VETLRHLKNL 187
N+F G+ ++ L LSH +I I +AF L LK+L+L N + +E ++HL L
Sbjct: 164 NSFEGLSNLETLLLSHNQITHIHKDAFTPL-VKLKYLSLSRNRISNFSGILEAVQHLPCL 222
Query: 188 TLIDLSKNKIGKIPDDSFSTLNNLVTLKLSDNNLTLYKNSFRGLELNN--NLTLYKN 242
+DL N I + D S +L +L L NNLT + +F L L N NL+ +N
Sbjct: 223 EHLDLINNSIMYL-DHSPRSLVSLTHLSFEGNNLT--ELNFSTLSLPNLTNLSASQN 276
>TAIR|locus:2825762 [details] [associations]
symbol:RLP6 "AT1G45616" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0007165
"signal transduction" evidence=IC;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0002237 "response to molecule of bacterial
origin" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG4886 EMBL:AC083835 InterPro:IPR013210 Pfam:PF08263
HOGENOM:HOG000116562 IPI:IPI00539296 PIR:H96510 RefSeq:NP_175139.1
UniGene:At.65982 ProteinModelPortal:Q9C637 SMR:Q9C637 PaxDb:Q9C637
PRIDE:Q9C637 EnsemblPlants:AT1G45616.1 GeneID:841101
KEGG:ath:AT1G45616 TAIR:At1g45616 InParanoid:Q9C637 OMA:SHNTLEG
PhylomeDB:Q9C637 ProtClustDB:CLSN2681899 Genevestigator:Q9C637
Uniprot:Q9C637
Length = 994
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 61/219 (27%), Positives = 105/219 (47%)
Query: 35 SELQSTCICSYNTANELSIQCNDLTNYPLFKATLNKHVNTKVPLDLLYINNSAIRNINEN 94
++L+ ICS + L + L+N F A N + +P L I++ ++ N
Sbjct: 374 NQLRYIDICSNHFTGFLPPTISQLSNLEFFSACDNSFTGS-IPSSLFNISSLTTLGLSYN 432
Query: 95 TFNGIF-IKNLQLSHCRINSITPNAFRHLDAIRNINENTFNGIFIKNL-QLSHCRINSIT 152
N IKN+ L H + N + A + ++ + F + +K L L+ I T
Sbjct: 433 QLNDTTNIKNISLLHNLQRLLLDN--NNFKASQ-VDLDVF--LSLKRLVSLALSGIPLST 487
Query: 153 PNAFRHLEFT--LKHLNLQENDLEQVPVETLRHLKNLTLIDLSKNKI-GKIPDDSFSTLN 209
N EF+ L++L L ++ + P E +R+ +NL+ IDLS N I G++P+ + L
Sbjct: 488 TNITSDSEFSSHLEYLELSGCNIIEFP-EFIRNQRNLSSIDLSNNNIKGQVPNWLWR-LP 545
Query: 210 NLVTLKLSDNNLTLYKNSFRGLELNN--NLTLYKNSFRG 246
L T+ LS+N+L + S + L + L L N+F+G
Sbjct: 546 ELSTVDLSNNSLIGFNGSLKALSGSKIVMLDLSSNAFQG 584
WARNING: HSPs involving 307 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 269 253 0.00083 114 3 11 22 0.44 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 557
No. of states in DFA: 586 (62 KB)
Total size of DFA: 179 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.33u 0.07s 27.40t Elapsed: 00:00:19
Total cpu time: 27.42u 0.07s 27.49t Elapsed: 00:00:19
Start: Thu Aug 15 12:59:02 2013 End: Thu Aug 15 12:59:21 2013
WARNINGS ISSUED: 2