Query psy1055
Match_columns 256
No_of_seqs 125 out of 1314
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 21:17:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1055.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1055hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 9.2E-37 2E-41 254.4 18.0 237 15-255 28-294 (294)
2 PRK10673 acyl-CoA esterase; Pr 100.0 6.8E-36 1.5E-40 243.8 22.0 234 14-254 14-254 (255)
3 TIGR02240 PHA_depoly_arom poly 100.0 2.4E-35 5.2E-40 243.7 17.1 226 15-254 24-265 (276)
4 PRK03592 haloalkane dehalogena 100.0 5E-35 1.1E-39 244.1 18.4 236 14-255 25-289 (295)
5 PLN02965 Probable pheophorbida 100.0 5.6E-35 1.2E-39 238.9 17.3 229 18-255 5-253 (255)
6 KOG2382|consensus 100.0 1E-33 2.2E-38 229.1 23.9 241 14-254 50-312 (315)
7 PRK00870 haloalkane dehalogena 100.0 7.2E-35 1.6E-39 243.9 17.2 230 14-255 44-301 (302)
8 PRK10349 carboxylesterase BioH 100.0 6.1E-35 1.3E-39 238.7 15.8 229 15-254 11-255 (256)
9 PLN02679 hydrolase, alpha/beta 100.0 2.6E-34 5.7E-39 245.7 18.3 239 15-255 87-357 (360)
10 PLN03087 BODYGUARD 1 domain co 100.0 1.1E-32 2.4E-37 240.2 21.6 241 14-254 199-478 (481)
11 KOG4178|consensus 100.0 4.1E-33 8.9E-38 225.5 17.0 233 12-255 40-320 (322)
12 PRK06489 hypothetical protein; 100.0 7.4E-33 1.6E-37 237.0 19.1 237 16-255 69-357 (360)
13 TIGR03611 RutD pyrimidine util 100.0 5.8E-33 1.3E-37 225.7 17.5 240 14-254 11-257 (257)
14 TIGR03343 biphenyl_bphD 2-hydr 100.0 3E-32 6.5E-37 225.6 21.8 231 14-254 28-282 (282)
15 PRK11126 2-succinyl-6-hydroxy- 100.0 2.2E-32 4.9E-37 221.5 19.9 230 16-255 2-242 (242)
16 PRK03204 haloalkane dehalogena 100.0 1.5E-32 3.2E-37 228.1 18.1 236 14-253 32-286 (286)
17 PLN02578 hydrolase 100.0 2.9E-32 6.4E-37 232.8 18.8 235 14-253 84-353 (354)
18 PLN03084 alpha/beta hydrolase 100.0 1.8E-32 3.8E-37 234.4 17.4 233 15-254 126-383 (383)
19 TIGR03056 bchO_mg_che_rel puta 100.0 4.6E-32 1E-36 223.5 17.9 237 15-253 27-278 (278)
20 TIGR01738 bioH putative pimelo 100.0 3.8E-32 8.1E-37 218.9 16.3 224 17-252 5-245 (245)
21 PRK08775 homoserine O-acetyltr 100.0 9.7E-32 2.1E-36 228.7 16.3 235 16-254 57-338 (343)
22 KOG1454|consensus 100.0 4.9E-32 1.1E-36 226.9 14.0 238 13-255 55-324 (326)
23 PLN02385 hydrolase; alpha/beta 100.0 4.7E-31 1E-35 225.1 18.4 237 14-255 85-345 (349)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.1E-30 2.5E-35 210.8 16.1 223 15-253 12-251 (251)
25 PRK07581 hypothetical protein; 100.0 1E-30 2.2E-35 222.3 14.3 239 17-255 42-336 (339)
26 PRK00175 metX homoserine O-ace 100.0 2.9E-30 6.3E-35 222.2 15.2 239 15-255 47-374 (379)
27 TIGR01392 homoserO_Ac_trn homo 100.0 3.5E-30 7.6E-35 219.8 15.0 238 14-253 29-351 (351)
28 PF12697 Abhydrolase_6: Alpha/ 100.0 1.4E-30 3E-35 206.9 10.8 218 19-247 1-228 (228)
29 PHA02857 monoglyceride lipase; 100.0 8.9E-29 1.9E-33 204.4 21.7 233 16-255 25-273 (276)
30 PLN02894 hydrolase, alpha/beta 100.0 3.5E-29 7.7E-34 216.5 18.9 241 13-254 102-384 (402)
31 PLN02211 methyl indole-3-aceta 100.0 2.9E-29 6.3E-34 206.8 17.6 230 13-254 15-269 (273)
32 KOG4409|consensus 100.0 2E-29 4.3E-34 204.8 15.9 240 14-255 88-364 (365)
33 PRK10749 lysophospholipase L2; 100.0 1.8E-28 3.9E-33 207.6 21.2 237 15-255 53-329 (330)
34 TIGR01250 pro_imino_pep_2 prol 100.0 1.3E-28 2.8E-33 203.0 19.7 235 15-253 24-288 (288)
35 PLN02980 2-oxoglutarate decarb 100.0 2.2E-29 4.8E-34 247.4 17.4 231 14-254 1369-1638(1655)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 5E-29 1.1E-33 200.8 15.3 224 16-253 1-251 (251)
37 PLN02298 hydrolase, alpha/beta 100.0 2.3E-28 5E-33 207.1 17.2 234 16-254 59-316 (330)
38 PRK14875 acetoin dehydrogenase 100.0 2.2E-27 4.7E-32 204.0 17.6 229 14-254 129-370 (371)
39 TIGR01249 pro_imino_pep_1 prol 99.9 7E-26 1.5E-30 189.9 18.2 235 14-254 25-304 (306)
40 PLN02652 hydrolase; alpha/beta 99.9 3.5E-26 7.6E-31 196.7 14.8 231 15-254 135-386 (395)
41 PRK05855 short chain dehydroge 99.9 8.8E-26 1.9E-30 204.7 17.5 236 14-254 23-291 (582)
42 PLN02511 hydrolase 99.9 1E-25 2.3E-30 194.2 15.7 231 14-254 98-364 (388)
43 PRK06765 homoserine O-acetyltr 99.9 3.2E-25 6.9E-30 190.2 14.1 196 59-254 140-387 (389)
44 COG1647 Esterase/lipase [Gener 99.9 7.1E-24 1.5E-28 161.9 16.1 220 12-254 11-243 (243)
45 KOG2564|consensus 99.9 2E-24 4.4E-29 170.0 12.8 231 13-254 71-326 (343)
46 KOG2984|consensus 99.9 5.4E-25 1.2E-29 165.4 7.6 236 3-254 26-275 (277)
47 TIGR03100 hydr1_PEP hydrolase, 99.9 3.3E-22 7.2E-27 165.0 20.8 228 11-254 21-274 (274)
48 COG2267 PldB Lysophospholipase 99.9 2.3E-22 5E-27 167.0 19.3 234 17-255 35-294 (298)
49 PRK05077 frsA fermentation/res 99.9 7E-22 1.5E-26 171.4 21.1 210 16-255 193-412 (414)
50 PRK10985 putative hydrolase; P 99.9 3.3E-22 7.1E-27 168.9 18.2 231 14-254 56-319 (324)
51 TIGR01607 PST-A Plasmodium sub 99.9 1.2E-21 2.6E-26 165.8 16.0 233 16-253 21-331 (332)
52 KOG1455|consensus 99.9 6.3E-21 1.4E-25 152.7 16.9 240 8-254 44-311 (313)
53 COG0596 MhpC Predicted hydrola 99.9 1E-20 2.2E-25 152.5 17.5 233 16-253 21-280 (282)
54 PRK11071 esterase YqiA; Provis 99.9 2E-20 4.2E-25 145.9 17.9 181 17-253 2-189 (190)
55 PF00561 Abhydrolase_1: alpha/ 99.9 5.7E-23 1.2E-27 164.4 3.5 196 48-249 8-229 (230)
56 PRK10566 esterase; Provisional 99.8 9.4E-20 2E-24 148.3 15.9 199 15-255 26-248 (249)
57 PLN02872 triacylglycerol lipas 99.8 1.3E-19 2.9E-24 155.5 16.2 234 15-254 73-388 (395)
58 PRK13604 luxD acyl transferase 99.8 4E-19 8.8E-24 145.8 16.2 207 15-255 36-259 (307)
59 TIGR01836 PHA_synth_III_C poly 99.8 1.5E-18 3.3E-23 148.1 19.0 234 15-254 61-349 (350)
60 PRK07868 acyl-CoA synthetase; 99.8 3.3E-19 7.1E-24 170.3 16.5 240 14-254 65-360 (994)
61 TIGR01838 PHA_synth_I poly(R)- 99.8 1.2E-18 2.6E-23 153.8 18.5 228 15-242 187-462 (532)
62 PRK11460 putative hydrolase; P 99.7 8E-17 1.7E-21 129.6 15.3 172 11-253 11-210 (232)
63 TIGR03101 hydr2_PEP hydrolase, 99.7 5.2E-17 1.1E-21 132.3 11.9 97 16-112 25-132 (266)
64 PF06342 DUF1057: Alpha/beta h 99.7 6.5E-16 1.4E-20 123.3 17.3 96 17-114 36-137 (297)
65 PF12695 Abhydrolase_5: Alpha/ 99.7 3.2E-17 6.9E-22 122.1 8.8 141 18-235 1-145 (145)
66 COG3208 GrsT Predicted thioest 99.7 4.3E-15 9.2E-20 116.4 17.4 215 16-253 7-234 (244)
67 TIGR02821 fghA_ester_D S-formy 99.7 2.7E-15 5.8E-20 123.9 15.8 97 15-111 41-170 (275)
68 PLN02442 S-formylglutathione h 99.7 3.5E-15 7.6E-20 123.6 15.7 97 15-111 46-175 (283)
69 COG2021 MET2 Homoserine acetyl 99.7 2.2E-15 4.8E-20 124.5 14.1 194 59-254 126-367 (368)
70 KOG2931|consensus 99.6 2.5E-14 5.5E-19 114.1 17.0 237 4-253 35-304 (326)
71 KOG4667|consensus 99.6 1.3E-14 2.8E-19 110.8 14.6 213 14-251 31-254 (269)
72 COG0429 Predicted hydrolase of 99.6 5.1E-14 1.1E-18 114.8 17.8 238 10-254 69-339 (345)
73 PF03096 Ndr: Ndr family; Int 99.6 1.2E-14 2.7E-19 117.2 13.7 227 15-254 22-278 (283)
74 PLN00021 chlorophyllase 99.6 3E-14 6.6E-19 119.1 16.3 97 14-112 50-164 (313)
75 TIGR03230 lipo_lipase lipoprot 99.6 5.2E-15 1.1E-19 127.6 11.2 102 12-113 37-153 (442)
76 KOG1552|consensus 99.6 6.6E-14 1.4E-18 110.4 14.5 185 15-254 59-251 (258)
77 KOG4391|consensus 99.5 5.1E-14 1.1E-18 107.7 8.5 198 12-254 74-281 (300)
78 PF00975 Thioesterase: Thioest 99.5 2.4E-13 5.3E-18 109.1 12.9 213 17-252 1-229 (229)
79 cd00707 Pancreat_lipase_like P 99.5 5.3E-14 1.2E-18 115.9 8.9 102 12-113 32-146 (275)
80 PRK10252 entF enterobactin syn 99.5 2E-12 4.4E-17 127.6 19.2 100 14-114 1066-1171(1296)
81 PF00326 Peptidase_S9: Prolyl 99.5 1.1E-12 2.4E-17 104.3 12.7 188 32-255 3-209 (213)
82 TIGR01840 esterase_phb esteras 99.5 2.9E-12 6.2E-17 101.8 14.5 100 14-113 11-129 (212)
83 COG1506 DAP2 Dipeptidyl aminop 99.4 1.9E-12 4.1E-17 118.2 13.9 200 17-255 395-616 (620)
84 KOG1838|consensus 99.4 2.2E-11 4.7E-16 102.9 19.1 232 13-253 122-386 (409)
85 PF02230 Abhydrolase_2: Phosph 99.4 2E-12 4.3E-17 103.0 11.1 175 11-255 9-215 (216)
86 PRK10162 acetyl esterase; Prov 99.4 3.1E-11 6.7E-16 101.8 18.5 211 14-255 79-315 (318)
87 COG0400 Predicted esterase [Ge 99.4 7.6E-12 1.6E-16 97.9 11.6 170 10-254 12-204 (207)
88 PF06821 Ser_hydrolase: Serine 99.3 1.1E-11 2.4E-16 94.7 10.4 157 19-242 1-160 (171)
89 KOG2565|consensus 99.3 5.9E-11 1.3E-15 97.8 13.5 95 16-110 152-260 (469)
90 PF01738 DLH: Dienelactone hyd 99.3 3.8E-11 8.2E-16 95.8 12.2 173 14-255 12-217 (218)
91 TIGR03502 lipase_Pla1_cef extr 99.3 1.5E-11 3.2E-16 112.7 10.4 85 16-100 449-576 (792)
92 PF05728 UPF0227: Uncharacteri 99.3 7.5E-10 1.6E-14 85.6 17.4 180 19-252 2-186 (187)
93 PF06028 DUF915: Alpha/beta hy 99.2 1.1E-10 2.4E-15 94.4 11.9 198 13-253 8-253 (255)
94 PF07819 PGAP1: PGAP1-like pro 99.2 8.1E-11 1.7E-15 94.0 10.3 99 14-112 2-121 (225)
95 COG3319 Thioesterase domains o 99.2 4.1E-09 9E-14 85.1 18.7 97 17-115 1-104 (257)
96 PF10230 DUF2305: Uncharacteri 99.2 5.9E-10 1.3E-14 91.4 12.6 95 17-111 3-119 (266)
97 PF06500 DUF1100: Alpha/beta h 99.2 7.2E-10 1.6E-14 94.4 12.9 210 15-254 188-408 (411)
98 PF08538 DUF1749: Protein of u 99.1 3E-10 6.4E-15 92.9 9.1 90 16-111 33-145 (303)
99 TIGR01839 PHA_synth_II poly(R) 99.1 3.7E-09 7.9E-14 93.5 15.9 97 14-112 213-326 (560)
100 TIGR01849 PHB_depoly_PhaZ poly 99.1 1.2E-08 2.7E-13 87.5 18.0 235 16-254 102-405 (406)
101 TIGR00976 /NonD putative hydro 99.1 2.1E-10 4.5E-15 103.7 6.5 98 14-112 20-130 (550)
102 COG0412 Dienelactone hydrolase 99.1 1.9E-08 4.2E-13 81.0 16.6 169 17-255 28-233 (236)
103 smart00824 PKS_TE Thioesterase 99.0 6.5E-08 1.4E-12 75.9 17.7 93 21-114 2-102 (212)
104 PF05448 AXE1: Acetyl xylan es 99.0 2.4E-08 5.3E-13 83.9 15.6 206 14-254 81-319 (320)
105 PF09752 DUF2048: Uncharacteri 99.0 2.2E-08 4.7E-13 83.3 14.7 223 15-254 91-348 (348)
106 PLN02733 phosphatidylcholine-s 99.0 2.1E-09 4.5E-14 93.6 8.8 86 27-112 105-199 (440)
107 PTZ00472 serine carboxypeptida 98.9 4.7E-08 1E-12 86.2 16.2 97 15-111 76-213 (462)
108 PRK05371 x-prolyl-dipeptidyl a 98.9 4E-08 8.6E-13 91.6 15.3 77 34-111 270-370 (767)
109 PF07859 Abhydrolase_3: alpha/ 98.9 9.3E-09 2E-13 81.4 9.7 93 19-111 1-107 (211)
110 PF12146 Hydrolase_4: Putative 98.9 3E-09 6.5E-14 70.4 5.6 67 8-74 8-79 (79)
111 PF01674 Lipase_2: Lipase (cla 98.9 1.6E-09 3.4E-14 85.7 4.9 83 17-100 2-96 (219)
112 COG3571 Predicted hydrolase of 98.9 7.9E-08 1.7E-12 70.6 12.7 175 17-255 15-211 (213)
113 PRK10115 protease 2; Provision 98.9 5.8E-08 1.3E-12 89.8 15.1 97 13-110 442-555 (686)
114 PF03959 FSH1: Serine hydrolas 98.9 5E-09 1.1E-13 83.2 7.0 159 16-241 4-207 (212)
115 PF10503 Esterase_phd: Esteras 98.9 3.9E-08 8.5E-13 77.9 11.5 114 1-114 1-132 (220)
116 COG3545 Predicted esterase of 98.9 3.4E-07 7.3E-12 68.6 15.3 171 16-254 2-178 (181)
117 PF12740 Chlorophyllase2: Chlo 98.8 2.3E-08 5E-13 80.4 9.6 99 14-112 15-129 (259)
118 COG2945 Predicted hydrolase of 98.8 2.7E-07 5.8E-12 70.0 14.3 168 14-253 26-205 (210)
119 PF05057 DUF676: Putative seri 98.8 2.4E-08 5.1E-13 79.6 7.4 79 18-96 6-95 (217)
120 PF07224 Chlorophyllase: Chlor 98.8 2.6E-08 5.7E-13 79.0 7.3 99 14-112 44-155 (307)
121 PF08840 BAAT_C: BAAT / Acyl-C 98.7 1.2E-08 2.5E-13 81.1 5.0 50 65-115 5-57 (213)
122 COG4757 Predicted alpha/beta h 98.7 2E-07 4.4E-12 72.7 11.5 224 11-252 24-280 (281)
123 PF02273 Acyl_transf_2: Acyl t 98.7 1.6E-06 3.5E-11 68.3 15.2 202 16-254 30-251 (294)
124 KOG1515|consensus 98.7 2.4E-06 5.2E-11 71.9 16.8 221 14-255 88-335 (336)
125 COG4814 Uncharacterized protei 98.7 2.2E-07 4.9E-12 73.3 9.9 98 15-112 44-174 (288)
126 PRK04940 hypothetical protein; 98.6 2.4E-06 5.3E-11 65.1 14.7 52 197-253 126-178 (180)
127 KOG4627|consensus 98.6 1.1E-07 2.3E-12 72.9 5.8 189 5-241 57-253 (270)
128 KOG2624|consensus 98.6 9.4E-07 2E-11 75.9 12.2 99 14-112 71-197 (403)
129 COG3243 PhaC Poly(3-hydroxyalk 98.5 6.6E-06 1.4E-10 69.9 15.4 95 15-111 106-214 (445)
130 COG0657 Aes Esterase/lipase [L 98.5 5.8E-06 1.3E-10 69.6 15.3 98 14-111 77-188 (312)
131 KOG1551|consensus 98.5 1.3E-06 2.9E-11 69.4 10.4 57 198-255 309-366 (371)
132 COG1075 LipA Predicted acetylt 98.5 4.3E-07 9.4E-12 77.0 8.3 97 16-112 59-162 (336)
133 PF00151 Lipase: Lipase; Inte 98.5 1.7E-07 3.6E-12 79.1 5.6 103 12-114 67-187 (331)
134 KOG3975|consensus 98.5 3.4E-06 7.3E-11 66.6 12.1 234 14-253 27-301 (301)
135 COG3458 Acetyl esterase (deace 98.5 6E-07 1.3E-11 71.7 7.7 203 15-254 82-316 (321)
136 COG4188 Predicted dienelactone 98.4 1.7E-06 3.7E-11 72.4 9.8 203 15-244 70-303 (365)
137 PLN02606 palmitoyl-protein thi 98.4 8.6E-05 1.9E-09 61.1 17.5 95 15-112 25-130 (306)
138 COG3509 LpqC Poly(3-hydroxybut 98.3 5.1E-06 1.1E-10 67.4 9.9 101 14-114 58-179 (312)
139 PF03403 PAF-AH_p_II: Platelet 98.3 8E-07 1.7E-11 76.5 5.7 100 14-114 98-262 (379)
140 PF02129 Peptidase_S15: X-Pro 98.3 1.2E-05 2.6E-10 66.3 11.6 97 15-111 19-133 (272)
141 PF00756 Esterase: Putative es 98.3 2.6E-06 5.7E-11 69.2 7.5 49 63-111 96-147 (251)
142 PF05990 DUF900: Alpha/beta hy 98.2 4.8E-06 1E-10 67.0 6.8 98 14-111 16-134 (233)
143 PRK10439 enterobactin/ferric e 98.1 2.8E-05 6E-10 67.8 11.2 98 15-112 208-321 (411)
144 PF05705 DUF829: Eukaryotic pr 98.1 0.00013 2.8E-09 59.0 14.3 220 18-252 1-240 (240)
145 KOG3724|consensus 98.1 1.8E-05 3.9E-10 71.8 8.8 100 12-111 85-217 (973)
146 PF10142 PhoPQ_related: PhoPQ- 98.1 9.1E-05 2E-09 63.1 12.3 158 66-254 156-319 (367)
147 PF08386 Abhydrolase_4: TAP-li 98.1 9.3E-06 2E-10 56.7 5.3 60 195-254 34-93 (103)
148 PF05677 DUF818: Chlamydia CHL 98.0 3.7E-05 8E-10 63.8 9.1 89 11-101 132-237 (365)
149 COG4099 Predicted peptidase [G 98.0 3E-05 6.6E-10 62.9 8.3 95 17-111 192-301 (387)
150 PF11339 DUF3141: Protein of u 98.0 0.00023 5.1E-09 62.2 14.0 99 11-112 63-173 (581)
151 PF02450 LCAT: Lecithin:choles 98.0 3E-05 6.5E-10 67.2 8.7 87 31-117 66-163 (389)
152 COG3150 Predicted esterase [Ge 98.0 4.9E-05 1.1E-09 56.5 8.1 84 19-109 2-87 (191)
153 KOG2100|consensus 97.9 0.00018 3.9E-09 67.4 12.3 193 14-253 523-745 (755)
154 KOG2112|consensus 97.8 5.6E-05 1.2E-09 58.4 6.6 169 16-253 3-202 (206)
155 COG4782 Uncharacterized protei 97.8 7.2E-05 1.6E-09 62.5 7.6 97 14-110 114-230 (377)
156 KOG3253|consensus 97.8 0.00019 4.2E-09 63.5 10.4 175 15-253 175-372 (784)
157 PLN02633 palmitoyl protein thi 97.8 0.00025 5.4E-09 58.5 9.9 96 14-112 23-129 (314)
158 cd00741 Lipase Lipase. Lipase 97.8 5.8E-05 1.3E-09 56.6 5.9 51 62-112 7-65 (153)
159 PF12715 Abhydrolase_7: Abhydr 97.8 6.4E-05 1.4E-09 63.6 6.4 96 15-111 114-257 (390)
160 KOG3847|consensus 97.7 2.9E-05 6.4E-10 63.4 3.7 102 13-115 115-276 (399)
161 KOG2281|consensus 97.7 0.00037 7.9E-09 62.3 10.6 198 16-254 642-866 (867)
162 PF06057 VirJ: Bacterial virul 97.7 0.00027 5.9E-09 54.2 8.4 90 18-112 4-105 (192)
163 KOG1553|consensus 97.7 0.00016 3.4E-09 60.0 7.3 93 14-109 240-340 (517)
164 PF04301 DUF452: Protein of un 97.7 0.00037 8.1E-09 54.8 8.7 83 16-117 11-93 (213)
165 COG0627 Predicted esterase [Ge 97.7 0.00017 3.7E-09 60.4 7.2 51 60-110 127-183 (316)
166 PF05577 Peptidase_S28: Serine 97.6 0.00037 8.1E-09 61.5 9.5 95 17-111 29-145 (434)
167 PF01764 Lipase_3: Lipase (cla 97.6 0.00015 3.2E-09 53.4 5.5 38 62-99 47-84 (140)
168 PF02089 Palm_thioest: Palmito 97.6 0.00021 4.6E-09 58.3 6.6 98 15-112 4-114 (279)
169 KOG4840|consensus 97.6 0.0017 3.7E-08 50.8 11.2 88 17-110 37-140 (299)
170 KOG2541|consensus 97.5 0.0011 2.5E-08 53.2 9.0 97 13-112 20-126 (296)
171 COG2819 Predicted hydrolase of 97.3 0.0028 6.2E-08 51.2 10.2 50 63-112 118-170 (264)
172 KOG2551|consensus 97.2 0.00059 1.3E-08 53.3 5.0 59 193-254 161-219 (230)
173 KOG3101|consensus 97.2 0.0004 8.7E-09 53.8 4.0 109 1-109 28-171 (283)
174 cd00519 Lipase_3 Lipase (class 97.1 0.0014 3E-08 52.6 5.9 33 67-99 116-148 (229)
175 PF12048 DUF3530: Protein of u 97.1 0.0077 1.7E-07 50.7 10.5 46 67-112 181-227 (310)
176 cd00312 Esterase_lipase Estera 97.0 0.0025 5.4E-08 57.2 7.8 97 14-112 93-211 (493)
177 PF11187 DUF2974: Protein of u 97.0 0.002 4.4E-08 51.4 6.2 44 68-112 74-121 (224)
178 PLN02162 triacylglycerol lipas 97.0 0.0025 5.5E-08 55.5 6.9 37 62-98 261-297 (475)
179 KOG4372|consensus 96.9 0.00075 1.6E-08 57.4 3.2 96 13-108 75-183 (405)
180 PLN00413 triacylglycerol lipas 96.9 0.0034 7.5E-08 54.8 6.9 37 62-98 267-303 (479)
181 PF10340 DUF2424: Protein of u 96.9 0.011 2.3E-07 50.6 9.6 98 15-112 121-233 (374)
182 PLN02517 phosphatidylcholine-s 96.8 0.0045 9.8E-08 55.5 7.0 83 30-112 156-261 (642)
183 PF03583 LIP: Secretory lipase 96.8 0.0041 8.8E-08 51.8 6.4 45 193-237 217-266 (290)
184 COG2272 PnbA Carboxylesterase 96.7 0.0044 9.6E-08 54.2 6.6 47 65-111 164-214 (491)
185 KOG2183|consensus 96.6 0.0092 2E-07 51.0 7.4 95 16-110 80-198 (492)
186 PLN02454 triacylglycerol lipas 96.6 0.0038 8.1E-08 53.9 5.2 36 64-99 211-248 (414)
187 KOG3967|consensus 96.6 0.019 4.1E-07 44.8 8.4 44 70-113 181-226 (297)
188 PLN02571 triacylglycerol lipas 96.6 0.0037 8E-08 54.0 4.9 37 63-99 208-246 (413)
189 KOG2369|consensus 96.5 0.014 2.9E-07 50.9 8.1 84 28-111 122-222 (473)
190 PF06259 Abhydrolase_8: Alpha/ 96.5 0.013 2.8E-07 44.9 7.1 51 62-112 87-142 (177)
191 KOG1202|consensus 96.4 0.02 4.4E-07 55.1 8.8 96 13-115 2120-2220(2376)
192 PLN02934 triacylglycerol lipas 96.4 0.0058 1.3E-07 53.8 5.0 37 62-98 304-340 (515)
193 PLN02408 phospholipase A1 96.4 0.0059 1.3E-07 52.0 5.0 37 63-99 182-220 (365)
194 PF00135 COesterase: Carboxyle 96.3 0.017 3.8E-07 52.1 7.9 99 16-114 125-245 (535)
195 PLN02324 triacylglycerol lipas 96.1 0.01 2.3E-07 51.2 5.0 36 63-98 197-234 (415)
196 KOG3043|consensus 96.0 0.0095 2.1E-07 46.8 4.1 63 193-255 162-240 (242)
197 PLN02310 triacylglycerol lipas 96.0 0.02 4.3E-07 49.4 6.5 36 63-98 189-228 (405)
198 COG4287 PqaA PhoPQ-activated p 95.9 0.075 1.6E-06 45.0 9.0 153 70-243 225-378 (507)
199 PLN02753 triacylglycerol lipas 95.9 0.013 2.9E-07 51.9 4.8 36 63-98 291-331 (531)
200 PLN02802 triacylglycerol lipas 95.8 0.014 3.1E-07 51.5 4.8 36 63-98 312-349 (509)
201 PLN03037 lipase class 3 family 95.6 0.019 4.2E-07 50.8 4.7 36 63-98 298-337 (525)
202 PLN02719 triacylglycerol lipas 95.6 0.021 4.5E-07 50.5 4.8 36 63-98 277-317 (518)
203 PLN02761 lipase class 3 family 95.5 0.022 4.8E-07 50.5 4.8 36 63-98 272-313 (527)
204 PLN02847 triacylglycerol lipas 95.3 0.052 1.1E-06 48.9 6.6 40 72-111 244-285 (633)
205 COG1073 Hydrolases of the alph 95.3 0.039 8.4E-07 45.3 5.7 63 193-255 229-297 (299)
206 COG2936 Predicted acyl esteras 95.3 0.023 5E-07 51.0 4.3 74 38-111 75-156 (563)
207 PF00450 Peptidase_S10: Serine 95.2 0.012 2.7E-07 51.3 2.5 98 15-112 39-179 (415)
208 PF11288 DUF3089: Protein of u 95.1 0.052 1.1E-06 42.6 5.3 41 60-100 75-116 (207)
209 PF07082 DUF1350: Protein of u 95.0 0.1 2.2E-06 42.0 6.7 81 30-111 34-122 (250)
210 PF04083 Abhydro_lipase: Parti 94.9 0.019 4.2E-07 35.9 2.0 22 11-32 38-59 (63)
211 KOG2182|consensus 94.8 0.23 4.9E-06 43.8 8.7 97 14-110 84-203 (514)
212 PF01083 Cutinase: Cutinase; 94.6 0.057 1.2E-06 41.6 4.3 49 63-111 65-119 (179)
213 COG3946 VirJ Type IV secretory 94.4 0.16 3.4E-06 43.6 6.7 71 19-94 263-341 (456)
214 PF05277 DUF726: Protein of un 94.4 0.1 2.2E-06 44.3 5.7 38 77-115 218-260 (345)
215 KOG4569|consensus 94.3 0.072 1.6E-06 45.4 4.7 36 63-98 155-190 (336)
216 PLN02213 sinapoylglucose-malat 94.3 0.11 2.3E-06 44.1 5.7 59 195-254 233-316 (319)
217 COG2382 Fes Enterochelin ester 94.3 0.075 1.6E-06 43.8 4.6 95 15-110 97-208 (299)
218 PF00450 Peptidase_S10: Serine 93.6 0.31 6.7E-06 42.5 7.6 59 195-253 330-414 (415)
219 KOG1516|consensus 93.4 0.26 5.5E-06 44.9 6.9 97 16-112 112-230 (545)
220 PLN02209 serine carboxypeptida 93.4 0.19 4.2E-06 44.3 5.9 59 195-254 351-434 (437)
221 COG4947 Uncharacterized protei 93.2 0.29 6.2E-06 37.1 5.5 98 14-111 24-133 (227)
222 PLN03016 sinapoylglucose-malat 92.9 0.26 5.5E-06 43.6 5.8 59 195-254 347-430 (433)
223 COG1505 Serine proteases of th 92.5 1.1 2.4E-05 40.6 9.1 94 15-109 420-530 (648)
224 PF11144 DUF2920: Protein of u 92.5 0.22 4.7E-06 43.0 4.6 30 80-109 185-214 (403)
225 KOG2551|consensus 92.4 0.6 1.3E-05 36.9 6.6 34 63-98 89-123 (230)
226 KOG2237|consensus 91.6 0.14 3.1E-06 46.3 2.7 98 12-109 466-579 (712)
227 PF06850 PHB_depo_C: PHB de-po 91.4 0.32 6.9E-06 37.6 4.0 60 195-254 134-201 (202)
228 COG5153 CVT17 Putative lipase 91.2 0.34 7.4E-06 39.7 4.2 33 69-101 266-298 (425)
229 KOG4540|consensus 91.2 0.34 7.4E-06 39.7 4.2 33 69-101 266-298 (425)
230 COG2939 Carboxypeptidase C (ca 90.3 0.47 1E-05 42.0 4.5 103 9-111 93-233 (498)
231 COG1770 PtrB Protease II [Amin 90.1 1.2 2.5E-05 40.9 6.9 99 11-109 443-557 (682)
232 KOG2029|consensus 89.8 0.57 1.2E-05 42.3 4.7 35 63-97 507-544 (697)
233 KOG1282|consensus 89.4 0.76 1.7E-05 40.7 5.2 59 196-254 364-447 (454)
234 PF05576 Peptidase_S37: PS-10 87.5 1.2 2.6E-05 38.6 5.0 96 15-110 62-165 (448)
235 KOG2521|consensus 87.3 18 0.00039 31.0 12.1 60 195-254 225-289 (350)
236 cd07225 Pat_PNPLA6_PNPLA7 Pata 86.5 1.1 2.3E-05 37.8 4.2 63 31-101 3-65 (306)
237 PF00698 Acyl_transf_1: Acyl t 85.8 0.65 1.4E-05 39.2 2.6 30 68-97 73-102 (318)
238 smart00827 PKS_AT Acyl transfe 85.8 1 2.2E-05 37.5 3.8 30 69-98 72-101 (298)
239 cd07198 Patatin Patatin-like p 85.1 1.5 3.2E-05 33.3 4.1 33 69-101 16-48 (172)
240 PRK10279 hypothetical protein; 84.6 1.3 2.9E-05 37.0 3.9 34 69-102 23-56 (300)
241 cd07207 Pat_ExoU_VipD_like Exo 84.2 1.6 3.6E-05 33.7 4.1 31 70-100 18-48 (194)
242 cd07227 Pat_Fungal_NTE1 Fungal 84.0 1.6 3.6E-05 35.9 4.1 32 69-100 28-59 (269)
243 PLN02209 serine carboxypeptida 83.5 4.8 0.0001 35.7 7.1 96 16-111 68-209 (437)
244 COG4553 DepA Poly-beta-hydroxy 83.4 25 0.00055 29.4 16.2 52 59-111 150-206 (415)
245 TIGR03131 malonate_mdcH malona 83.2 1.6 3.4E-05 36.4 3.8 31 68-98 65-95 (295)
246 PF09949 DUF2183: Uncharacteri 82.3 4.8 0.0001 27.7 5.2 78 32-109 13-97 (100)
247 cd07210 Pat_hypo_W_succinogene 82.1 2.3 5E-05 33.9 4.2 29 72-100 21-49 (221)
248 TIGR00128 fabD malonyl CoA-acy 82.1 1.7 3.8E-05 35.9 3.7 30 69-98 72-102 (290)
249 COG1752 RssA Predicted esteras 82.0 2 4.4E-05 36.1 4.0 33 69-101 29-61 (306)
250 PF07519 Tannase: Tannase and 80.8 3 6.5E-05 37.4 4.8 60 195-254 353-426 (474)
251 PLN03016 sinapoylglucose-malat 80.4 6.9 0.00015 34.7 6.9 97 15-111 65-207 (433)
252 PRK12467 peptide synthase; Pro 80.2 11 0.00023 43.1 9.6 97 17-113 3693-3794(3956)
253 cd07209 Pat_hypo_Ecoli_Z1214_l 77.8 3.7 8.1E-05 32.5 4.1 32 70-101 17-48 (215)
254 cd07228 Pat_NTE_like_bacteria 77.4 3.3 7.1E-05 31.6 3.6 30 72-101 21-50 (175)
255 PF08237 PE-PPE: PE-PPE domain 77.3 7.7 0.00017 31.0 5.8 39 60-98 27-67 (225)
256 COG2830 Uncharacterized protei 76.1 22 0.00047 26.9 7.3 34 201-237 170-203 (214)
257 cd07230 Pat_TGL4-5_like Triacy 74.9 2.2 4.7E-05 37.7 2.2 43 65-108 88-130 (421)
258 cd07205 Pat_PNPLA6_PNPLA7_NTE1 74.2 5.7 0.00012 30.2 4.2 31 70-100 19-49 (175)
259 cd07212 Pat_PNPLA9 Patatin-lik 73.6 6.2 0.00013 33.3 4.6 19 82-100 35-53 (312)
260 TIGR02816 pfaB_fam PfaB family 72.7 4.5 9.8E-05 36.8 3.7 31 69-99 254-285 (538)
261 PF07519 Tannase: Tannase and 72.1 10 0.00023 34.0 5.8 49 63-111 96-147 (474)
262 PF05576 Peptidase_S37: PS-10 70.6 11 0.00023 33.0 5.3 55 195-251 351-410 (448)
263 cd07229 Pat_TGL3_like Triacylg 70.5 2.8 6E-05 36.5 1.8 38 72-109 104-141 (391)
264 cd07232 Pat_PLPL Patain-like p 70.3 2.6 5.7E-05 36.9 1.6 43 65-108 82-124 (407)
265 cd07208 Pat_hypo_Ecoli_yjju_li 69.1 8.3 0.00018 31.5 4.3 33 71-103 18-51 (266)
266 cd07224 Pat_like Patatin-like 67.6 9.4 0.0002 30.7 4.2 33 68-101 17-51 (233)
267 PF11713 Peptidase_C80: Peptid 67.6 3.3 7.3E-05 31.1 1.5 44 48-91 61-116 (157)
268 cd07231 Pat_SDP1-like Sugar-De 67.2 4.1 8.8E-05 34.3 2.1 41 65-106 83-123 (323)
269 cd01714 ETF_beta The electron 66.4 11 0.00025 29.5 4.4 50 59-109 90-144 (202)
270 KOG1282|consensus 66.1 29 0.00063 31.0 7.2 95 16-111 73-210 (454)
271 KOG4388|consensus 64.7 28 0.0006 32.1 6.7 81 18-98 398-488 (880)
272 KOG2112|consensus 64.6 7.9 0.00017 30.4 3.1 13 241-253 159-171 (206)
273 cd07222 Pat_PNPLA4 Patatin-lik 64.2 6.1 0.00013 32.1 2.6 23 81-104 33-55 (246)
274 COG4822 CbiK Cobalamin biosynt 63.4 32 0.00068 27.3 6.1 62 11-84 133-199 (265)
275 KOG3043|consensus 63.4 11 0.00025 30.0 3.7 92 18-110 41-150 (242)
276 COG3887 Predicted signaling pr 62.5 51 0.0011 30.4 8.0 95 15-112 257-376 (655)
277 cd07204 Pat_PNPLA_like Patatin 62.1 13 0.00028 30.1 4.1 20 82-101 34-53 (243)
278 PF09994 DUF2235: Uncharacteri 61.5 51 0.0011 27.2 7.6 39 61-99 72-112 (277)
279 COG2939 Carboxypeptidase C (ca 61.0 14 0.0003 33.1 4.2 29 224-253 461-489 (498)
280 cd07218 Pat_iPLA2 Calcium-inde 59.4 15 0.00033 29.8 4.0 36 66-101 16-52 (245)
281 cd07206 Pat_TGL3-4-5_SDP1 Tria 59.3 12 0.00026 31.3 3.5 39 65-104 84-122 (298)
282 TIGR00521 coaBC_dfp phosphopan 59.2 89 0.0019 27.4 8.9 91 17-111 113-232 (390)
283 TIGR03712 acc_sec_asp2 accesso 58.8 11 0.00024 33.7 3.2 90 11-102 284-381 (511)
284 COG3621 Patatin [General funct 57.8 19 0.00041 30.5 4.3 38 64-101 22-64 (394)
285 PRK13398 3-deoxy-7-phosphohept 57.2 1.1E+02 0.0024 25.2 10.4 73 14-89 132-208 (266)
286 TIGR01361 DAHP_synth_Bsub phos 56.7 70 0.0015 26.2 7.5 71 14-89 130-206 (260)
287 cd07221 Pat_PNPLA3 Patatin-lik 55.9 19 0.00042 29.3 4.1 35 66-101 16-54 (252)
288 PRK07313 phosphopantothenoylcy 55.2 54 0.0012 25.2 6.3 60 15-74 112-179 (182)
289 PF00070 Pyr_redox: Pyridine n 55.1 23 0.00049 22.8 3.7 33 80-115 1-33 (80)
290 COG0331 FabD (acyl-carrier-pro 54.2 14 0.00031 31.1 3.2 29 70-98 74-104 (310)
291 PF06309 Torsin: Torsin; Inte 53.6 13 0.00028 26.8 2.4 20 13-32 49-68 (127)
292 cd07220 Pat_PNPLA2 Patatin-lik 53.4 22 0.00048 28.9 4.0 36 65-101 19-58 (249)
293 PRK12595 bifunctional 3-deoxy- 52.4 76 0.0016 27.5 7.3 73 14-89 223-299 (360)
294 cd01819 Patatin_and_cPLA2 Pata 51.3 26 0.00056 26.1 3.9 29 68-97 16-46 (155)
295 PF14253 AbiH: Bacteriophage a 50.9 15 0.00032 30.0 2.8 15 77-91 233-247 (270)
296 PRK05579 bifunctional phosphop 50.1 1.2E+02 0.0027 26.6 8.4 69 16-86 116-196 (399)
297 cd07211 Pat_PNPLA8 Patatin-lik 48.5 19 0.00042 30.1 3.1 16 83-98 45-60 (308)
298 TIGR03607 patatin-related prot 48.3 23 0.0005 33.6 3.8 31 68-98 52-85 (739)
299 PLN02213 sinapoylglucose-malat 48.1 41 0.00089 28.4 5.1 62 50-111 12-93 (319)
300 PF05577 Peptidase_S28: Serine 46.9 29 0.00063 30.6 4.2 40 196-238 377-416 (434)
301 PF06057 VirJ: Bacterial virul 46.7 40 0.00088 26.2 4.3 52 195-253 139-190 (192)
302 COG4850 Uncharacterized conser 46.5 1.5E+02 0.0032 25.3 7.7 96 17-114 214-315 (373)
303 COG3727 Vsr DNA G:T-mismatch r 45.1 18 0.0004 26.1 2.0 25 2-26 38-67 (150)
304 PLN02752 [acyl-carrier protein 44.8 24 0.00052 30.1 3.2 29 70-98 109-143 (343)
305 cd07217 Pat17_PNPLA8_PNPLA9_li 44.3 19 0.00041 30.9 2.4 18 82-99 44-61 (344)
306 KOG2385|consensus 43.8 32 0.0007 31.1 3.7 36 77-112 445-485 (633)
307 KOG1283|consensus 43.1 32 0.0007 29.2 3.5 64 49-112 81-164 (414)
308 PF06289 FlbD: Flagellar prote 43.0 52 0.0011 20.3 3.6 34 221-255 25-58 (60)
309 TIGR02813 omega_3_PfaA polyket 41.2 27 0.0006 38.2 3.5 30 68-97 663-692 (2582)
310 cd07213 Pat17_PNPLA8_PNPLA9_li 40.9 22 0.00049 29.5 2.4 19 82-100 37-55 (288)
311 PF03283 PAE: Pectinacetyleste 40.3 82 0.0018 27.3 5.7 37 79-115 156-196 (361)
312 PF01734 Patatin: Patatin-like 39.4 36 0.00078 25.4 3.2 22 79-100 27-48 (204)
313 PF00862 Sucrose_synth: Sucros 39.3 53 0.0012 29.7 4.4 38 62-99 383-422 (550)
314 PRK10802 peptidoglycan-associa 39.1 44 0.00095 25.5 3.5 22 66-87 88-109 (173)
315 PF03490 Varsurf_PPLC: Variant 38.4 33 0.00072 20.1 2.0 26 60-85 6-31 (51)
316 TIGR02802 Pal_lipo peptidoglyc 38.1 46 0.001 22.6 3.3 57 30-86 17-79 (104)
317 PF10605 3HBOH: 3HB-oligomer h 37.3 41 0.00089 31.1 3.5 44 193-236 552-604 (690)
318 PRK01581 speE spermidine synth 37.3 2.5E+02 0.0055 24.5 8.0 95 16-114 68-184 (374)
319 COG2885 OmpA Outer membrane pr 37.2 89 0.0019 24.0 5.1 52 34-85 104-161 (190)
320 COG1582 FlgEa Uncharacterized 37.2 75 0.0016 19.8 3.5 46 208-255 13-58 (67)
321 KOG2214|consensus 35.5 17 0.00037 32.6 0.8 43 66-109 190-232 (543)
322 KOG1283|consensus 34.9 23 0.00049 30.0 1.4 36 218-253 377-412 (414)
323 PRK07877 hypothetical protein; 34.4 58 0.0013 31.1 4.1 37 73-112 102-139 (722)
324 PRK04148 hypothetical protein; 33.8 1E+02 0.0022 22.5 4.5 32 79-114 18-49 (134)
325 cd00382 beta_CA Carbonic anhyd 33.5 50 0.0011 23.4 2.9 44 48-94 31-74 (119)
326 PF04084 ORC2: Origin recognit 33.5 95 0.0021 26.4 5.0 73 20-92 57-150 (326)
327 COG1448 TyrB Aspartate/tyrosin 33.0 3E+02 0.0064 24.1 7.7 79 18-111 173-262 (396)
328 PRK05309 30S ribosomal protein 32.7 1.3E+02 0.0028 21.7 4.9 64 50-115 50-115 (128)
329 COG2876 AroA 3-deoxy-D-arabino 32.6 2E+02 0.0043 23.8 6.3 71 14-90 150-227 (286)
330 PF11144 DUF2920: Protein of u 32.6 1.5E+02 0.0033 26.1 6.0 30 18-47 37-68 (403)
331 PF10503 Esterase_phd: Esteras 32.2 44 0.00096 26.6 2.6 25 195-219 169-193 (220)
332 cd07199 Pat17_PNPLA8_PNPLA9_li 31.8 71 0.0015 25.9 3.9 17 83-99 38-54 (258)
333 COG2355 Zn-dependent dipeptida 31.3 2.8E+02 0.0061 23.5 7.2 76 12-88 179-262 (313)
334 cd07219 Pat_PNPLA1 Patatin-lik 31.1 68 0.0015 27.9 3.7 19 81-99 46-64 (382)
335 PRK11613 folP dihydropteroate 30.8 3.2E+02 0.0068 22.8 7.7 16 78-93 210-225 (282)
336 COG4667 Predicted esterase of 30.7 53 0.0011 27.1 2.8 44 66-109 27-70 (292)
337 PF02633 Creatininase: Creatin 30.2 2E+02 0.0043 23.0 6.2 65 33-97 43-119 (237)
338 PF12740 Chlorophyllase2: Chlo 29.8 1.2E+02 0.0026 24.9 4.8 49 193-241 152-211 (259)
339 PF12641 Flavodoxin_3: Flavodo 29.7 91 0.002 23.4 3.8 58 196-253 40-97 (160)
340 PRK14729 miaA tRNA delta(2)-is 29.5 3.4E+02 0.0075 22.8 7.6 67 17-85 4-99 (300)
341 PRK06029 3-octaprenyl-4-hydrox 29.3 2.7E+02 0.0058 21.5 7.2 59 15-80 114-178 (185)
342 PLN02748 tRNA dimethylallyltra 29.2 4.1E+02 0.0089 24.0 8.4 70 14-85 19-118 (468)
343 COG0421 SpeE Spermidine syntha 28.8 85 0.0018 26.1 3.9 49 61-113 61-109 (282)
344 KOG2170|consensus 28.8 52 0.0011 27.7 2.5 31 10-42 103-133 (344)
345 cd07216 Pat17_PNPLA8_PNPLA9_li 28.0 37 0.00081 28.5 1.7 17 82-98 45-61 (309)
346 PF09754 PAC2: PAC2 family; I 27.9 65 0.0014 25.3 3.0 26 60-85 81-106 (219)
347 CHL00041 rps11 ribosomal prote 27.5 2.3E+02 0.0049 20.1 5.9 64 50-115 46-111 (116)
348 cd07214 Pat17_isozyme_like Pat 27.5 42 0.00091 28.8 1.9 19 83-101 47-65 (349)
349 PRK13512 coenzyme A disulfide 27.0 1.2E+02 0.0026 26.8 4.8 46 66-114 136-181 (438)
350 COG3618 Predicted metal-depend 25.7 3.6E+02 0.0079 22.4 6.8 64 18-83 163-233 (279)
351 PF00484 Pro_CA: Carbonic anhy 25.6 1.7E+02 0.0038 21.4 4.8 36 62-97 38-73 (153)
352 PRK13397 3-deoxy-7-phosphohept 25.1 3.5E+02 0.0076 22.1 6.6 38 14-51 120-160 (250)
353 KOG3079|consensus 24.6 1.3E+02 0.0029 23.3 3.9 31 12-44 3-33 (195)
354 PRK07451 translation initiatio 24.6 2.4E+02 0.0052 20.0 4.9 59 15-79 50-109 (115)
355 PRK14759 potassium-transportin 24.3 71 0.0015 16.5 1.6 10 95-104 20-29 (29)
356 cd07215 Pat17_PNPLA8_PNPLA9_li 24.3 53 0.0011 27.9 1.9 17 82-98 43-59 (329)
357 PF03403 PAF-AH_p_II: Platelet 24.2 62 0.0013 28.2 2.4 50 193-244 272-324 (379)
358 PRK11789 N-acetyl-anhydromuran 24.0 83 0.0018 24.4 2.8 27 62-88 132-158 (185)
359 cd03379 beta_CA_cladeD Carboni 23.7 98 0.0021 22.6 3.0 31 64-94 41-71 (142)
360 COG2230 Cfa Cyclopropane fatty 23.7 2E+02 0.0043 24.0 5.0 48 61-109 52-103 (283)
361 PRK06193 hypothetical protein; 23.4 3.7E+02 0.0081 21.2 6.4 52 60-114 135-188 (206)
362 PRK07281 methionine aminopepti 23.2 98 0.0021 25.8 3.3 30 60-89 172-202 (286)
363 cd02001 TPP_ComE_PpyrDC Thiami 23.1 1.7E+02 0.0037 21.7 4.3 18 236-253 126-143 (157)
364 PRK14194 bifunctional 5,10-met 23.1 1.5E+02 0.0033 24.9 4.3 43 65-111 142-190 (301)
365 cd00883 beta_CA_cladeA Carboni 23.1 1.1E+02 0.0024 23.5 3.3 33 65-97 67-99 (182)
366 PRK10236 hypothetical protein; 23.0 75 0.0016 25.6 2.4 31 23-53 53-87 (237)
367 COG0288 CynT Carbonic anhydras 22.4 94 0.002 24.5 2.9 35 63-97 76-110 (207)
368 KOG0372|consensus 22.2 1.9E+02 0.0041 23.7 4.4 60 18-79 155-228 (303)
369 TIGR02354 thiF_fam2 thiamine b 22.1 2E+02 0.0043 22.5 4.6 40 71-113 14-54 (200)
370 COG3673 Uncharacterized conser 21.9 1.8E+02 0.0038 25.0 4.4 38 62-99 103-142 (423)
371 TIGR03632 bact_S11 30S ribosom 21.5 2.9E+02 0.0063 19.2 6.0 64 50-115 33-98 (108)
372 cd01014 nicotinamidase_related 21.4 1.6E+02 0.0035 21.7 3.9 46 67-113 88-134 (155)
373 PRK12318 methionine aminopepti 21.4 95 0.0021 25.9 2.9 29 61-89 183-212 (291)
374 PF08484 Methyltransf_14: C-me 21.3 2.9E+02 0.0063 20.7 5.2 47 62-108 50-98 (160)
375 COG2515 Acd 1-aminocyclopropan 21.3 5.1E+02 0.011 22.0 9.8 93 18-112 118-215 (323)
376 TIGR00421 ubiX_pad polyprenyl 21.1 3.9E+02 0.0084 20.5 7.4 63 15-79 111-174 (181)
377 PRK08671 methionine aminopepti 21.0 1.1E+02 0.0024 25.5 3.1 31 60-90 125-156 (291)
378 PF15566 Imm18: Immunity prote 20.5 1.6E+02 0.0034 17.6 2.8 30 62-91 4-33 (52)
379 PRK14457 ribosomal RNA large s 20.5 5.2E+02 0.011 22.2 7.2 70 19-93 260-333 (345)
380 PRK06382 threonine dehydratase 20.3 5.9E+02 0.013 22.3 9.5 83 21-112 123-208 (406)
381 cd08663 DAP_dppA_1 Peptidase M 20.2 1.9E+02 0.0041 23.9 4.2 54 193-252 145-200 (266)
382 cd00884 beta_CA_cladeB Carboni 20.1 1.4E+02 0.0031 23.1 3.4 34 64-97 72-105 (190)
383 TIGR03789 pdsO proteobacterial 20.0 1.7E+02 0.0037 23.7 3.9 68 18-85 136-213 (239)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=9.2e-37 Score=254.40 Aligned_cols=237 Identities=15% Similarity=0.238 Sum_probs=156.6
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCC--------CCCHHHHHHHHHHHHHHcCCCceeEE
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTD--------VFSYAHLAEDVKYFLETESIAQADVL 84 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~--------~~s~~~~a~dl~~~l~~l~~~~~~lv 84 (256)
++++|||+||+++++..|+.+++.|+++++++. +||||.|+... .|+++++++|+.++++++++++++||
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lv 107 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVI 107 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEE
Confidence 368999999999999999999999998864333 99999997642 47899999999999999999999999
Q ss_pred eeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCc-----hhhH-HHHHHHHHhcCccc-cc-C-CChHHHHHHHHHHH
Q psy1055 85 GHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT-----LRHM-SGLFDAMKSVNLDE-LS-G-QPLHAVRKIVDKAL 155 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~ 155 (256)
||||||++++.+|+++|++|+++|++++.+.+.... ...+ ..+...+....... +. . ......+..+...+
T Consensus 108 GhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (294)
T PLN02824 108 CNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCY 187 (294)
T ss_pred EeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhc
Confidence 999999999999999999999999998644221100 0110 11111111000000 00 0 00000010000000
Q ss_pred ----------HhhccCCCCceeeeeChHHHHHhhhhhccC-CCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCC
Q psy1055 156 ----------ATAVDLKGKQIIWQCNLDSLQTQFFNHMIN-FPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA 224 (256)
Q Consensus 156 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 224 (256)
........ .............. .... .......++++|+|+|+|++|..++.+.++.+++.++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~ 263 (294)
T PLN02824 188 HDDSAVTDELVEAILRPG---LEPGAVDVFLDFIS-YSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVE 263 (294)
T ss_pred cChhhccHHHHHHHHhcc---CCchHHHHHHHHhc-cccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCcc
Confidence 00000000 00000011111100 0000 000112378999999999999999988888899988899
Q ss_pred eEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+++++++|||++++|+|++|++.|.+|+++.
T Consensus 264 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 264 DFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred ceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999863
No 2
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=6.8e-36 Score=243.84 Aligned_cols=234 Identities=29% Similarity=0.520 Sum_probs=162.7
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGR 91 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 91 (256)
++++||||+||++++...|..++..|++.+.++. +||||.|.....++++++++|+.++++++++++++|+||||||.
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ 93 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGK 93 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHH
Confidence 5678999999999999999999999998754333 89999998877789999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHH-----HHHhhccCCCCce
Q psy1055 92 AMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDK-----ALATAVDLKGKQI 166 (256)
Q Consensus 92 ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 166 (256)
+++.+|.++|++|+++|+++++|...... ......+.+....... ..........+.. .+...........
T Consensus 94 va~~~a~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (255)
T PRK10673 94 AVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAINAVSEAG--ATTRQQAAAIMRQHLNEEGVIQFLLKSFVDG 169 (255)
T ss_pred HHHHHHHhCHhhcceEEEEecCCCCccch--hhHHHHHHHHHhhhcc--cccHHHHHHHHHHhcCCHHHHHHHHhcCCcc
Confidence 99999999999999999998765432111 1111111111100000 0001111111110 0011110001111
Q ss_pred eeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHH
Q psy1055 167 IWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVD 246 (256)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~ 246 (256)
.+....+.....+. .+.... ....+++|+|+|+|++|..++++..+.+++.+|+++++++++|||++++|+|+++++
T Consensus 170 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 170 EWRFNVPVLWDQYP-HIVGWE--KIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred eeEeeHHHHHHhHH-HHhCCc--ccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHH
Confidence 12222222211111 111111 123678999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q psy1055 247 KVVDFYRS 254 (256)
Q Consensus 247 ~i~~fl~~ 254 (256)
.|.+||++
T Consensus 247 ~l~~fl~~ 254 (255)
T PRK10673 247 AIRRYLND 254 (255)
T ss_pred HHHHHHhc
Confidence 99999975
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.4e-35 Score=243.75 Aligned_cols=226 Identities=18% Similarity=0.229 Sum_probs=153.6
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCC-CCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHT-DVFSYAHLAEDVKYFLETESIAQADVLGHSMGGR 91 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~-~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 91 (256)
+++||||+||++++...|..+++.|++.+++++ +||||.|+.+ ..++++++++|+.++++++++++++||||||||+
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~ 103 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGA 103 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHH
Confidence 457999999999999999999999988754333 9999999764 3478999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhc--CcccccCCChHHHHHH----------HHHHHHhhc
Q psy1055 92 AMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSV--NLDELSGQPLHAVRKI----------VDKALATAV 159 (256)
Q Consensus 92 ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~~ 159 (256)
+++.+|.++|++|++||++++++....... .......+... .... .......... .........
T Consensus 104 va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (276)
T TIGR02240 104 LAQQFAHDYPERCKKLILAATAAGAVMVPG--KPKVLMMMASPRRYIQP--SHGIHIAPDIYGGAFRRDPELAMAHASKV 179 (276)
T ss_pred HHHHHHHHCHHHhhheEEeccCCccccCCC--chhHHHHhcCchhhhcc--ccccchhhhhccceeeccchhhhhhhhhc
Confidence 999999999999999999986543111000 00110000000 0000 0000000000 000000000
Q ss_pred cCCCCceeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccc
Q psy1055 160 DLKGKQIIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHS 238 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 238 (256)
.... .. ........ .. .... ....++++|+|+|+|++|.+++++..+.+++.+|+++++++++ ||++++
T Consensus 180 ~~~~---~~----~~~~~~~~-~~-~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~ 249 (276)
T TIGR02240 180 RSGG---KL----GYYWQLFA-GL-GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLI 249 (276)
T ss_pred ccCC---Cc----hHHHHHHH-Hc-CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhh
Confidence 0000 00 00000000 00 0110 1123789999999999999999998999999999999999975 999999
Q ss_pred cCchHHHHHHHHHHhh
Q psy1055 239 QKPDLFVDKVVDFYRS 254 (256)
Q Consensus 239 e~p~~~~~~i~~fl~~ 254 (256)
|+|++|++.|.+|+++
T Consensus 250 e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 250 TRAEAVAPIIMKFLAE 265 (276)
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9999999999999975
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5e-35 Score=244.07 Aligned_cols=236 Identities=15% Similarity=0.216 Sum_probs=152.7
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC-CCCHHHHHHHHHHHHHHcCCCceeEEeeChh
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD-VFSYAHLAEDVKYFLETESIAQADVLGHSMG 89 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~G 89 (256)
++++||||+||++++...|+.+++.|++.+ +++ +||||.|+.+. .++++++++|+.++++++++++++|||||||
T Consensus 25 G~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~G 103 (295)
T PRK03592 25 GEGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDWG 103 (295)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHH
Confidence 357899999999999999999999999887 554 99999998754 4899999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEeCCCCCCC-C-chhhHHHHHHHHHhcCcccccCCC-hHHHHHHH------------HHH
Q psy1055 90 GRAMMYLALANPHLVSSLIVVDISPVGVS-P-TLRHMSGLFDAMKSVNLDELSGQP-LHAVRKIV------------DKA 154 (256)
Q Consensus 90 g~ia~~~A~~~P~~v~~lil~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------~~~ 154 (256)
|.+|+.+|.++|++|+++|++++...... . ...........+............ ........ ...
T Consensus 104 g~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (295)
T PRK03592 104 SALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAV 183 (295)
T ss_pred HHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHH
Confidence 99999999999999999999985321110 0 001111112222111100000000 00000000 000
Q ss_pred HHhhccCCC-C--ceeee--e----ChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCCh-hHHhhcCCCC
Q psy1055 155 LATAVDLKG-K--QIIWQ--C----NLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPRA 224 (256)
Q Consensus 155 ~~~~~~~~~-~--~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~-~~~~~~~~~~ 224 (256)
+........ . ...+. . ......... ..+. ....++++|+|+|+|++|.++++... +.+++.++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 258 (295)
T PRK03592 184 YRRPFPTPESRRPTLSWPRELPIDGEPADVVALV----EEYA-QWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQL 258 (295)
T ss_pred HHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhh----hHhH-HHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhc
Confidence 000000000 0 00000 0 000000000 0000 01236899999999999999955444 4456667899
Q ss_pred eEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+++++++|||++++|+|++|++.|.+|+++.
T Consensus 259 ~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 259 EITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred ceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999863
No 5
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=5.6e-35 Score=238.88 Aligned_cols=229 Identities=16% Similarity=0.219 Sum_probs=152.4
Q ss_pred CEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCC--CCCCHHHHHHHHHHHHHHcCC-CceeEEeeChhHH
Q psy1055 18 PIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHT--DVFSYAHLAEDVKYFLETESI-AQADVLGHSMGGR 91 (256)
Q Consensus 18 ~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~--~~~s~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~ 91 (256)
+|||+||++.+...|+.+++.|++.+++++ +||||.|+.. ..++++++++|+.++++++++ ++++||||||||+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 599999999999999999999965545554 9999999754 247899999999999999988 4999999999999
Q ss_pred HHHHHHHhCCCCcccEEEEeCCCCCCCCc-hhhHHHHHHHHHhc-C--cccccCCCh--HHHHH-HHHHHHHhhccCCC-
Q psy1055 92 AMMYLALANPHLVSSLIVVDISPVGVSPT-LRHMSGLFDAMKSV-N--LDELSGQPL--HAVRK-IVDKALATAVDLKG- 163 (256)
Q Consensus 92 ia~~~A~~~P~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~- 163 (256)
|++.+|.++|++|+++|++++.+...... .............. . ......... ...+. ...... .....
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 161 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY---YNQSPL 161 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHH---hcCCCH
Confidence 99999999999999999998653211110 01111111100000 0 000000000 00000 000000 00000
Q ss_pred Cceee------eeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccc
Q psy1055 164 KQIIW------QCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH 237 (256)
Q Consensus 164 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 237 (256)
..... ........ ...... .....+++|+++|+|++|..++++..+.+++.+|+++++++++|||+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~ 235 (255)
T PLN02965 162 EDYTLSSKLLRPAPVRAFQ-----DLDKLP-PNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAF 235 (255)
T ss_pred HHHHHHHHhcCCCCCcchh-----hhhhcc-chhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchh
Confidence 00000 00000000 000000 0122689999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHhhc
Q psy1055 238 SQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 238 ~e~p~~~~~~i~~fl~~~ 255 (256)
+|+|++|++.|.+|++++
T Consensus 236 ~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 236 FSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred hcCHHHHHHHHHHHHHHh
Confidence 999999999999999864
No 6
>KOG2382|consensus
Probab=100.00 E-value=1e-33 Score=229.14 Aligned_cols=241 Identities=36% Similarity=0.662 Sum_probs=183.5
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee----cccccccCCCCCCCHHHHHHHHHHHHHHcC----CCceeEEe
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPHTDVFSYAHLAEDVKYFLETES----IAQADVLG 85 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~----~~~~~lvG 85 (256)
+..||++++||+.++..+|+.+...|++...+-+ .|.||.|+....+++..+|+|+..||+..+ ..+++++|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 4689999999999999999999999998754433 899999999888999999999999999984 67899999
Q ss_pred eChhH-HHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHH---------HHHHH
Q psy1055 86 HSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKI---------VDKAL 155 (256)
Q Consensus 86 hS~Gg-~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 155 (256)
||||| -+++.++..+|+.+.++|++|.+|...+.....+..++..+................... +.+.+
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi 209 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFI 209 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHH
Confidence 99999 888888999999999999999988644433333444555554443321000111111111 11112
Q ss_pred Hhhcc--CCCCceeeeeChHHHHHhhhhh-ccCCC-CCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecC
Q psy1055 156 ATAVD--LKGKQIIWQCNLDSLQTQFFNH-MINFP-QPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIED 231 (256)
Q Consensus 156 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (256)
...+. .....+.|.++...+.+.+.+. +..+. .......+.|||+|+|.++.+++.+....+.+.+|+++++.+++
T Consensus 210 ~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~ 289 (315)
T KOG2382|consen 210 LTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDE 289 (315)
T ss_pred HHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchheeeccc
Confidence 22332 2235578999999888776532 22222 22224678999999999999999999999999999999999999
Q ss_pred CCccccccCchHHHHHHHHHHhh
Q psy1055 232 AGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 232 ~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
||||+|.|+|++|.+.|.+|+.+
T Consensus 290 aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 290 AGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred CCceeecCCHHHHHHHHHHHhcc
Confidence 99999999999999999999975
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.2e-35 Score=243.90 Aligned_cols=230 Identities=15% Similarity=0.191 Sum_probs=151.9
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC---CCCHHHHHHHHHHHHHHcCCCceeEEeeC
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD---VFSYAHLAEDVKYFLETESIAQADVLGHS 87 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~---~~s~~~~a~dl~~~l~~l~~~~~~lvGhS 87 (256)
+++++|||+||++++...|..+++.|++.+++++ +||||.|+... .++++++++|+.++++++++++++|||||
T Consensus 44 ~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS 123 (302)
T PRK00870 44 ADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQD 123 (302)
T ss_pred CCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3578999999999999999999999987645554 99999997642 47899999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCcccEEEEeCCCC-CCCCchhhHHHHHHHHHhcC---cc-----cc-cCCChHHHHHHHHHHHHh
Q psy1055 88 MGGRAMMYLALANPHLVSSLIVVDISPV-GVSPTLRHMSGLFDAMKSVN---LD-----EL-SGQPLHAVRKIVDKALAT 157 (256)
Q Consensus 88 ~Gg~ia~~~A~~~P~~v~~lil~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~-----~~-~~~~~~~~~~~~~~~~~~ 157 (256)
|||.+++.+|.++|++|+++|++++... ........+........... .. .. ..... .. ...+..
T Consensus 124 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~ 198 (302)
T PRK00870 124 WGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSD-AV----RAAYDA 198 (302)
T ss_pred hHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCH-HH----HHHhhc
Confidence 9999999999999999999999975321 11000001111100000000 00 00 00000 00 000100
Q ss_pred hccCCC--Cceee-------eeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCe---
Q psy1055 158 AVDLKG--KQIIW-------QCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAE--- 225 (256)
Q Consensus 158 ~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--- 225 (256)
...... ..... ........... .... ...++++|+++|+|++|..++... +.+++.+|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~ 271 (302)
T PRK00870 199 PFPDESYKAGARAFPLLVPTSPDDPAVAANR-AAWA-----VLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQP 271 (302)
T ss_pred ccCChhhhcchhhhhhcCCCCCCCcchHHHH-HHHH-----hhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccc
Confidence 000000 00000 00000000000 0000 123789999999999999998765 88999999876
Q ss_pred EEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 226 ITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 226 ~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+.+++++||++++|+|++|++.|.+|+++.
T Consensus 272 ~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 272 HPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred eeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 899999999999999999999999999763
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=6.1e-35 Score=238.68 Aligned_cols=229 Identities=19% Similarity=0.238 Sum_probs=148.7
Q ss_pred CCC-CEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHH
Q psy1055 15 DTK-PIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGR 91 (256)
Q Consensus 15 ~~~-~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 91 (256)
+|+ |||||||++++...|+.+++.|.+++++++ +||||.|+....++++++++++.+ +++++++||||||||.
T Consensus 11 ~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ 86 (256)
T PRK10349 11 QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----QAPDKAIWLGWSLGGL 86 (256)
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh----cCCCCeEEEEECHHHH
Confidence 454 599999999999999999999998754443 999999977666788888887664 5678999999999999
Q ss_pred HHHHHHHhCCCCcccEEEEeCCCCCCCC----ch-hh-HHHHHHHHHhcC---ccccc---CCChHHHHHHHHHHHHhhc
Q psy1055 92 AMMYLALANPHLVSSLIVVDISPVGVSP----TL-RH-MSGLFDAMKSVN---LDELS---GQPLHAVRKIVDKALATAV 159 (256)
Q Consensus 92 ia~~~A~~~P~~v~~lil~~~~~~~~~~----~~-~~-~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~ 159 (256)
+++.+|.++|++|+++|+++++|..... .. .. .....+.+.... ...+. ............ .+....
T Consensus 87 ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 165 (256)
T PRK10349 87 VASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDAR-ALKKTV 165 (256)
T ss_pred HHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHH-HHHHHh
Confidence 9999999999999999999875532111 00 00 001101000000 00000 000000000000 011111
Q ss_pred cCCCCceeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccc
Q psy1055 160 DLKGKQIIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHS 238 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 238 (256)
..... ........... .+..... ....++++|||+|+|++|.+++.+..+.+++.+|+++++++|+|||++++
T Consensus 166 ~~~~~-----~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~ 239 (256)
T PRK10349 166 LALPM-----PEVDVLNGGLE-ILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI 239 (256)
T ss_pred hccCC-----CcHHHHHHHHH-HHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccc
Confidence 00000 00011111000 0011110 12237899999999999999998888899999999999999999999999
Q ss_pred cCchHHHHHHHHHHhh
Q psy1055 239 QKPDLFVDKVVDFYRS 254 (256)
Q Consensus 239 e~p~~~~~~i~~fl~~ 254 (256)
|+|++|++.|.+|-++
T Consensus 240 e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 240 SHPAEFCHLLVALKQR 255 (256)
T ss_pred cCHHHHHHHHHHHhcc
Confidence 9999999999999765
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.6e-34 Score=245.73 Aligned_cols=239 Identities=18% Similarity=0.219 Sum_probs=151.7
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCC--CCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTD--VFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
+++|||||||++++...|.++++.|++.++++. +||||.|+.+. .++++++++++.++++++++++++||||||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg 166 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGS 166 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHH
Confidence 458999999999999999999999998643333 99999997653 47899999999999999999999999999999
Q ss_pred HHHHHHHH-hCCCCcccEEEEeCCCCCCCCc-hhhHH--------HHHHHHHhcC-cccccCCChHHHHHHHHHHHHhhc
Q psy1055 91 RAMMYLAL-ANPHLVSSLIVVDISPVGVSPT-LRHMS--------GLFDAMKSVN-LDELSGQPLHAVRKIVDKALATAV 159 (256)
Q Consensus 91 ~ia~~~A~-~~P~~v~~lil~~~~~~~~~~~-~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
++++.+|+ .+|++|+++|++++.+...... ..... .++..+.... .... .+.....+..+...+....
T Consensus 167 ~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 245 (360)
T PLN02679 167 LACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASA-LFNRVKQRDNLKNILLSVY 245 (360)
T ss_pred HHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHH-HHHHhcCHHHHHHHHHHhc
Confidence 99999887 4799999999998643211110 00000 0000000000 0000 0000000000111111100
Q ss_pred cCCC--C-c--------eeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCccCCC-----hhHHhhcCC
Q psy1055 160 DLKG--K-Q--------IIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQED-----HPGIKSLFP 222 (256)
Q Consensus 160 ~~~~--~-~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~-----~~~~~~~~~ 222 (256)
.... . . ............... ....... ....++++|||+|+|++|.+++++. .+.+.+.+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip 324 (360)
T PLN02679 246 GNKEAVDDELVEIIRGPADDEGALDAFVSIVT-GPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP 324 (360)
T ss_pred cCcccCCHHHHHHHHhhccCCChHHHHHHHHh-cCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC
Confidence 0000 0 0 000000111111110 0000000 1123789999999999999988763 235667789
Q ss_pred CCeEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 223 RAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 223 ~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+++++++++|||++++|+|++|++.|.+||+++
T Consensus 325 ~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 325 NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999864
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.1e-32 Score=240.20 Aligned_cols=241 Identities=16% Similarity=0.252 Sum_probs=152.0
Q ss_pred CCCCCEEEEcCCccchhcHHH-HHHHHHh---hcCcee---cccccccCCC--CCCCHHHHHHHHH-HHHHHcCCCceeE
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNS-LAKAIHR---KTKKKI---ARNHGDSPHT--DVFSYAHLAEDVK-YFLETESIAQADV 83 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~-~~~~l~~---~~~~~v---~~ghG~S~~~--~~~s~~~~a~dl~-~~l~~l~~~~~~l 83 (256)
+.++||||+||++++..+|.. +++.|++ ..++++ +||||+|+.+ ..|+++++++++. ++++++++++++|
T Consensus 199 ~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~L 278 (481)
T PLN03087 199 KAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHI 278 (481)
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEE
Confidence 346899999999999999985 5677763 334554 9999999765 3489999999995 8999999999999
Q ss_pred EeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHH-hcCccccc-CCChHHHHHHH----------
Q psy1055 84 LGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMK-SVNLDELS-GQPLHAVRKIV---------- 151 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~---------- 151 (256)
+||||||++++.+|.+||++|+++|++++.....+.........++... ........ ...........
T Consensus 279 VGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 358 (481)
T PLN03087 279 VAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICK 358 (481)
T ss_pred EEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhccccc
Confidence 9999999999999999999999999998533222211111111111110 00000000 00000000000
Q ss_pred ----HHHHHhhccCCC-Cceee--------eeChHHHHHhhhhhccCCCC-C-CC-CCCCCCeeEEecCCCCCccCCChh
Q psy1055 152 ----DKALATAVDLKG-KQIIW--------QCNLDSLQTQFFNHMINFPQ-P-GE-KTYGGPTLFIGGGRSDFIRQEDHP 215 (256)
Q Consensus 152 ----~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~-~-~~-~~i~~P~lii~G~~D~~~~~~~~~ 215 (256)
.+.+........ ..... ......+.+........... + .. .++++|+|+|+|++|.++|++..+
T Consensus 359 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~ 438 (481)
T PLN03087 359 NHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSY 438 (481)
T ss_pred chHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHH
Confidence 000000010000 00000 00000000000000000000 0 01 158999999999999999999999
Q ss_pred HHhhcCCCCeEEEecCCCccccc-cCchHHHHHHHHHHhh
Q psy1055 216 GIKSLFPRAEITYIEDAGHWVHS-QKPDLFVDKVVDFYRS 254 (256)
Q Consensus 216 ~~~~~~~~~~~~~i~~~GH~~~~-e~p~~~~~~i~~fl~~ 254 (256)
.+++.+|++++++|++|||++++ |+|++|++.|.+|.+.
T Consensus 439 ~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 439 AVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 99999999999999999999996 9999999999999865
No 11
>KOG4178|consensus
Probab=100.00 E-value=4.1e-33 Score=225.54 Aligned_cols=233 Identities=19% Similarity=0.275 Sum_probs=158.3
Q ss_pred CCCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC---CCCHHHHHHHHHHHHHHcCCCceeEEe
Q psy1055 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD---VFSYAHLAEDVKYFLETESIAQADVLG 85 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~---~~s~~~~a~dl~~~l~~l~~~~~~lvG 85 (256)
..+++|.|+|+||++.+..+|+.+++.|+.++++++ +||+|.|+.+. .||+..++.|+..++++++.++++++|
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvg 119 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVG 119 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEe
Confidence 445788999999999999999999999999866665 99999998754 489999999999999999999999999
Q ss_pred eChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCccc-cc--CCCh-----HHHHHH-------
Q psy1055 86 HSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDE-LS--GQPL-----HAVRKI------- 150 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-----~~~~~~------- 150 (256)
|+||++||+.+|+.+|++|+++|+++.... .+ ..+........+....... +. .... ...+..
T Consensus 120 HDwGaivaw~la~~~Perv~~lv~~nv~~~-~p-~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~ 197 (322)
T KOG4178|consen 120 HDWGAIVAWRLALFYPERVDGLVTLNVPFP-NP-KLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTR 197 (322)
T ss_pred ccchhHHHHHHHHhChhhcceEEEecCCCC-Cc-ccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhcc
Confidence 999999999999999999999999985332 11 1111111111110000000 00 0000 000000
Q ss_pred -------------------HH---HHHHhhccCCCCceeeeeChHHHHHhhhhhcc-CCC--CCCCCCCCCCeeEEecCC
Q psy1055 151 -------------------VD---KALATAVDLKGKQIIWQCNLDSLQTQFFNHMI-NFP--QPGEKTYGGPTLFIGGGR 205 (256)
Q Consensus 151 -------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~~P~lii~G~~ 205 (256)
.. +.+.......+ +.-..| .+ +.+. .++ ......+++|+++|+|+.
T Consensus 198 ~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g--~~gplN------yy-rn~~r~w~a~~~~~~~i~iPv~fi~G~~ 268 (322)
T KOG4178|consen 198 KTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDG--FTGPLN------YY-RNFRRNWEAAPWALAKITIPVLFIWGDL 268 (322)
T ss_pred ccCCccccCCCCCCccchhhHHHHHHHHhcccccc--ccccch------hh-HHHhhCchhccccccccccceEEEEecC
Confidence 00 11111111110 000000 00 1111 111 234458899999999999
Q ss_pred CCCccCC-ChhHHhhcCCCC-eEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 206 SDFIRQE-DHPGIKSLFPRA-EITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 206 D~~~~~~-~~~~~~~~~~~~-~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
|...+.. ..+.+++.+|+. +.++++++||+++.|+|+++++++.+|+++.
T Consensus 269 D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 269 DPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 9887765 466778888887 7899999999999999999999999999874
No 12
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=7.4e-33 Score=237.01 Aligned_cols=237 Identities=15% Similarity=0.237 Sum_probs=147.7
Q ss_pred CCCEEEEcCCccchhcHH--HHHHHH--------HhhcCcee---cccccccCCCC--------CCCHHHHHHHHHHHH-
Q psy1055 16 TKPIIIMHGLLGSKNNWN--SLAKAI--------HRKTKKKI---ARNHGDSPHTD--------VFSYAHLAEDVKYFL- 73 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~--~~~~~l--------~~~~~~~v---~~ghG~S~~~~--------~~s~~~~a~dl~~~l- 73 (256)
++|||||||++++...|. .+.+.| ++.+ +++ +||||.|+.+. .|+++++++++.+++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~-~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKY-FIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCC-EEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 789999999999998886 566655 5544 454 99999997542 378999999998854
Q ss_pred HHcCCCcee-EEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHH-HHHHHHhcC-cccccCC-ChHHHHH
Q psy1055 74 ETESIAQAD-VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG-LFDAMKSVN-LDELSGQ-PLHAVRK 149 (256)
Q Consensus 74 ~~l~~~~~~-lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~ 149 (256)
+++++++++ ||||||||++|+.+|+++|++|+++|++++.+............ ....+.... ....... .....+.
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKR 227 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 889999986 89999999999999999999999999998654321111000111 111111110 0000000 0000010
Q ss_pred HHHHH-H-------HhhccCCCCc----e-------eeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCc
Q psy1055 150 IVDKA-L-------ATAVDLKGKQ----I-------IWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFI 209 (256)
Q Consensus 150 ~~~~~-~-------~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~ 209 (256)
..... . .......... + ............+. ....... ....+|++|||+|+|++|..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~L~~I~~PvLvI~G~~D~~~ 306 (360)
T PRK06489 228 ANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWD-SSRDYNPSPDLEKIKAPVLAINSADDERN 306 (360)
T ss_pred HHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHH-HhhccChHHHHHhCCCCEEEEecCCCccc
Confidence 00000 0 0000000000 0 00000111111110 1011110 112378999999999999999
Q ss_pred cCCCh--hHHhhcCCCCeEEEecCC----CccccccCchHHHHHHHHHHhhc
Q psy1055 210 RQEDH--PGIKSLFPRAEITYIEDA----GHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 210 ~~~~~--~~~~~~~~~~~~~~i~~~----GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+++.. +.+++.+|++++++||+| ||+++ |+|++|++.|.+||+++
T Consensus 307 p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 307 PPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred ChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 88765 789999999999999996 99997 89999999999999864
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=5.8e-33 Score=225.68 Aligned_cols=240 Identities=19% Similarity=0.297 Sum_probs=155.4
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCC--CCCCHHHHHHHHHHHHHHcCCCceeEEeeChh
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHT--DVFSYAHLAEDVKYFLETESIAQADVLGHSMG 89 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~--~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~G 89 (256)
+++++|||+||++++...|..+++.|.+.++++. +||||.|+.. ..++++++++++.+++++++.++++++|||||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~G 90 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHALG 90 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEechh
Confidence 4578999999999999999999999997753333 8999999753 34799999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCccccc-CCChHHH-HHHHHHHHHhhccCCCCcee
Q psy1055 90 GRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELS-GQPLHAV-RKIVDKALATAVDLKGKQII 167 (256)
Q Consensus 90 g~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 167 (256)
|++++.+|.++|++|+++|++++.....+.....+......+......... ....... ...+................
T Consensus 91 g~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (257)
T TIGR03611 91 GLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALA 170 (257)
T ss_pred HHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhccc
Confidence 999999999999999999998753321111111111111111111000000 0000000 00000000000000000000
Q ss_pred eeeChHHHHHhhhhhccCCC-CCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHH
Q psy1055 168 WQCNLDSLQTQFFNHMINFP-QPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVD 246 (256)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~ 246 (256)
...........+. .+.... .....++++|+++++|++|.+++++..+.+.+.+++++++.++++||++++|+|+++++
T Consensus 171 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 249 (257)
T TIGR03611 171 HFPGKANVLRRIN-ALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNR 249 (257)
T ss_pred ccCccHHHHHHHH-HHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHH
Confidence 0000011111110 111111 01223789999999999999999988888999999999999999999999999999999
Q ss_pred HHHHHHhh
Q psy1055 247 KVVDFYRS 254 (256)
Q Consensus 247 ~i~~fl~~ 254 (256)
.|.+||++
T Consensus 250 ~i~~fl~~ 257 (257)
T TIGR03611 250 ALLDFLKT 257 (257)
T ss_pred HHHHHhcC
Confidence 99999964
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=3e-32 Score=225.60 Aligned_cols=231 Identities=18% Similarity=0.257 Sum_probs=146.9
Q ss_pred CCCCCEEEEcCCccchhcHHHH---HHHHHhhcCcee---cccccccCCCC-CC-CHHHHHHHHHHHHHHcCCCceeEEe
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSL---AKAIHRKTKKKI---ARNHGDSPHTD-VF-SYAHLAEDVKYFLETESIAQADVLG 85 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~---~~~l~~~~~~~v---~~ghG~S~~~~-~~-s~~~~a~dl~~~l~~l~~~~~~lvG 85 (256)
+++++||||||++++...|..+ +..|.+.+++++ +||||.|+... .+ +...+++|+.++++++++++++++|
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG 107 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVG 107 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEE
Confidence 4578999999999988888754 445554444554 89999997642 22 2235789999999999999999999
Q ss_pred eChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCC----chhhHHHHHHHHHhcCccc---c---cCCChHHHHHHHHH-H
Q psy1055 86 HSMGGRAMMYLALANPHLVSSLIVVDISPVGVSP----TLRHMSGLFDAMKSVNLDE---L---SGQPLHAVRKIVDK-A 154 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~-~ 154 (256)
|||||++++.+|.++|++|+++|++++....... .........+.+....... . .............+ .
T Consensus 108 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (282)
T TIGR03343 108 NSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGR 187 (282)
T ss_pred ECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhH
Confidence 9999999999999999999999999854321110 0001111111100000000 0 00000000000000 0
Q ss_pred HHhhccCCCCceeeeeChHHHHHhhhh----hccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEe
Q psy1055 155 LATAVDLKGKQIIWQCNLDSLQTQFFN----HMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYI 229 (256)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i 229 (256)
+..... ........... .....+. ....++++|+|+|+|++|.+++++.++.+++.+|+++++++
T Consensus 188 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i 257 (282)
T TIGR03343 188 WENIQR----------QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVF 257 (282)
T ss_pred HHHhhc----------CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEe
Confidence 000000 00000000000 0000000 11237899999999999999999999999999999999999
Q ss_pred cCCCccccccCchHHHHHHHHHHhh
Q psy1055 230 EDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 230 ~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
++|||++++|+|++|++.|.+|+..
T Consensus 258 ~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 258 SRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999963
No 15
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=2.2e-32 Score=221.47 Aligned_cols=230 Identities=18% Similarity=0.278 Sum_probs=142.1
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAM 93 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia 93 (256)
+|+|||+||++++...|+.+++.|+ .++++. +||||.|+.....+++.+++|+.+++++++++++++|||||||.+|
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va 80 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIA 80 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHH
Confidence 6789999999999999999999995 443333 9999999876667899999999999999999999999999999999
Q ss_pred HHHHHhCCCC-cccEEEEeCCCCCCCCchhhHHHHHHHHHhc-CcccccCCChHHHHHHHHHHHHhhccCCCC-ce---e
Q psy1055 94 MYLALANPHL-VSSLIVVDISPVGVSPTLRHMSGLFDAMKSV-NLDELSGQPLHAVRKIVDKALATAVDLKGK-QI---I 167 (256)
Q Consensus 94 ~~~A~~~P~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~ 167 (256)
+.+|.++|+. |++++++++.+.... ............... .+.. ..........+.......+..... .+ .
T Consensus 81 ~~~a~~~~~~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (242)
T PRK11126 81 MYYACQGLAGGLCGLIVEGGNPGLQN-AEERQARWQNDRQWAQRFRQ--EPLEQVLADWYQQPVFASLNAEQRQQLVAKR 157 (242)
T ss_pred HHHHHhCCcccccEEEEeCCCCCCCC-HHHHHHHHhhhHHHHHHhcc--CcHHHHHHHHHhcchhhccCccHHHHHHHhc
Confidence 9999999764 999999875432111 111000000000000 0000 000000000000000000000000 00 0
Q ss_pred eeeChHHHHHhhhhh-ccCCCC--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHH
Q psy1055 168 WQCNLDSLQTQFFNH-MINFPQ--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLF 244 (256)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~~~~~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~ 244 (256)
...........+... ....+. ....++++|+++|+|++|..+. .+++. ++++++++++|||++++|+|++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~ 231 (242)
T PRK11126 158 SNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAF 231 (242)
T ss_pred ccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhChHHH
Confidence 000001111111000 000011 1123789999999999997542 33333 48999999999999999999999
Q ss_pred HHHHHHHHhhc
Q psy1055 245 VDKVVDFYRSL 255 (256)
Q Consensus 245 ~~~i~~fl~~~ 255 (256)
++.|.+|++++
T Consensus 232 ~~~i~~fl~~~ 242 (242)
T PRK11126 232 AASLAQILRLI 242 (242)
T ss_pred HHHHHHHHhhC
Confidence 99999999763
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.5e-32 Score=228.13 Aligned_cols=236 Identities=14% Similarity=0.198 Sum_probs=148.4
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCC--CCCHHHHHHHHHHHHHHcCCCceeEEeeChh
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTD--VFSYAHLAEDVKYFLETESIAQADVLGHSMG 89 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~G 89 (256)
+++++||||||++.+...|+.+++.|.+.++++. +||||.|+.+. .++.+++++++.++++++++++++++|||||
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~G 111 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWG 111 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECcc
Confidence 3578999999999999999999999998753333 99999997653 4788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHH-hcCcccccCCChHHHHHHHH---------HHHHhhc
Q psy1055 90 GRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMK-SVNLDELSGQPLHAVRKIVD---------KALATAV 159 (256)
Q Consensus 90 g~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 159 (256)
|.+++.+|+.+|++|+++|++++.... .... . ........ ..................+. +......
T Consensus 112 g~va~~~a~~~p~~v~~lvl~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (286)
T PRK03204 112 GPISMAVAVERADRVRGVVLGNTWFWP-ADTL-A-MKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYR 188 (286)
T ss_pred HHHHHHHHHhChhheeEEEEECccccC-CCch-h-HHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhc
Confidence 999999999999999999998643211 1110 0 00011000 00000000000000000000 0000000
Q ss_pred cCCCCceeeeeChHHHHHhhh---hhccCCC-CCCCCCCCCCeeEEecCCCCCccCC-ChhHHhhcCCCCeEEEecCCCc
Q psy1055 160 DLKGKQIIWQCNLDSLQTQFF---NHMINFP-QPGEKTYGGPTLFIGGGRSDFIRQE-DHPGIKSLFPRAEITYIEDAGH 234 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~GH 234 (256)
...... ............+. ..+.... ......+++|||+|+|++|..+++. ..+.+++.+|+++++++++|||
T Consensus 189 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH 267 (286)
T PRK03204 189 AVQPNA-AARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKH 267 (286)
T ss_pred CCCCCH-HHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcc
Confidence 000000 00000000000000 0000000 0000123899999999999887665 4678999999999999999999
Q ss_pred cccccCchHHHHHHHHHHh
Q psy1055 235 WVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 235 ~~~~e~p~~~~~~i~~fl~ 253 (256)
++++|+|++|++.|.+||.
T Consensus 268 ~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 268 FIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred cccccCHHHHHHHHHHhcC
Confidence 9999999999999999973
No 17
>PLN02578 hydrolase
Probab=100.00 E-value=2.9e-32 Score=232.76 Aligned_cols=235 Identities=16% Similarity=0.262 Sum_probs=153.8
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCC-CCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTD-VFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
++++||||+||++++...|..+++.|++++.++. +||||.|++.. .|+.+.+++++.+++++++.++++++||||||
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg 163 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGG 163 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHH
Confidence 3578999999999999999999999998754333 89999998753 48999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCCCCCCCch----------hhHHH-HHHHH----HhcCcccc--cCCChHHHHHHHHH
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISPVGVSPTL----------RHMSG-LFDAM----KSVNLDEL--SGQPLHAVRKIVDK 153 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~----------~~~~~-~~~~~----~~~~~~~~--~~~~~~~~~~~~~~ 153 (256)
++++.+|.++|++|+++|++++++....... ..... ....+ ........ ....... +..
T Consensus 164 ~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 239 (354)
T PLN02578 164 FTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSR----IES 239 (354)
T ss_pred HHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHH----HHH
Confidence 9999999999999999999986442111000 00000 00000 00000000 0000000 000
Q ss_pred HHHhhccCCC--Ccee------eeeC---hHHHHHhhhhhcc---CCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHh
Q psy1055 154 ALATAVDLKG--KQII------WQCN---LDSLQTQFFNHMI---NFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIK 218 (256)
Q Consensus 154 ~~~~~~~~~~--~~~~------~~~~---~~~~~~~~~~~~~---~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 218 (256)
.+........ ..+. ...+ .....+.....+. .... ....++++|+++|+|++|.+++.+..+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~ 319 (354)
T PLN02578 240 VLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIK 319 (354)
T ss_pred HHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 0000000000 0000 0000 0111111100010 1100 112378999999999999999998888999
Q ss_pred hcCCCCeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 219 SLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 219 ~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
+.+|+++++++ ++||++++|+|++|++.|.+|++
T Consensus 320 ~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 320 AFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999 59999999999999999999986
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=234.39 Aligned_cols=233 Identities=10% Similarity=0.163 Sum_probs=151.4
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCC-----CCCHHHHHHHHHHHHHHcCCCceeEEeeC
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTD-----VFSYAHLAEDVKYFLETESIAQADVLGHS 87 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~-----~~s~~~~a~dl~~~l~~l~~~~~~lvGhS 87 (256)
++++||||||++++...|+.+++.|++.++++. +||||.|+.+. .++++++++++.++++++++++++|||||
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s 205 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQG 205 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEEC
Confidence 468999999999999999999999998644333 99999997643 47999999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCc-hhhHHHHHHHHHhcCcccccCCChHHHH------------HHHHHH
Q psy1055 88 MGGRAMMYLALANPHLVSSLIVVDISPVGVSPT-LRHMSGLFDAMKSVNLDELSGQPLHAVR------------KIVDKA 154 (256)
Q Consensus 88 ~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 154 (256)
+||++++.+|.++|++|+++|++++........ ......+...+....+.. ....... ......
T Consensus 206 ~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~ 282 (383)
T PLN03084 206 YFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQ---DPLRASDKALTSCGPYAMKEDDAMV 282 (383)
T ss_pred HHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhc---chHHHHhhhhcccCccCCCHHHHHH
Confidence 999999999999999999999998542111000 001111100000000000 0000000 000000
Q ss_pred HHhhccCCCCceeeeeChHHHHHhhhhhccC----CCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEe
Q psy1055 155 LATAVDLKGKQIIWQCNLDSLQTQFFNHMIN----FPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYI 229 (256)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i 229 (256)
+...+..... .......+.+.+...... ... .....+++|+|+|||++|.+++.+..+.+++. ++++++++
T Consensus 283 ~~~~~~~~~~---~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vI 358 (383)
T PLN03084 283 YRRPYLTSGS---SGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIEL 358 (383)
T ss_pred HhccccCCcc---hHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEE
Confidence 0000000000 000000000111000000 000 11125799999999999999988877788776 58999999
Q ss_pred cCCCccccccCchHHHHHHHHHHhh
Q psy1055 230 EDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 230 ~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
++|||++++|+|+++++.|.+|+.+
T Consensus 359 p~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 359 PMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CCCCCCcchhCHHHHHHHHHHHhhC
Confidence 9999999999999999999999864
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=4.6e-32 Score=223.53 Aligned_cols=237 Identities=16% Similarity=0.253 Sum_probs=153.3
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCC--CCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTD--VFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
++++|||+||++++...|..+++.|++.++++. +||||.|+.+. .++++.+++|+.++++++++++++|+||||||
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg 106 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGA 106 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccH
Confidence 468999999999999999999999998753333 99999997643 47999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCCCCCCCchh-hHHHHHHHHHhcCcc-ccc---CCChHHHHHHHHHHHHhhccCCCCc
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISPVGVSPTLR-HMSGLFDAMKSVNLD-ELS---GQPLHAVRKIVDKALATAVDLKGKQ 165 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (256)
++++.+|.++|++++++|+++++......... ........+...... ... ............. ...........
T Consensus 107 ~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 185 (278)
T TIGR03056 107 AIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRD-TGSLLDKAGMT 185 (278)
T ss_pred HHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhc-cccccccchhh
Confidence 99999999999999999998764321111000 000000110000000 000 0000000000000 00000000000
Q ss_pred ee-----eeeChHHHHHhhhhhccCCC-CCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccccc
Q psy1055 166 II-----WQCNLDSLQTQFFNHMINFP-QPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQ 239 (256)
Q Consensus 166 ~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e 239 (256)
.. ............. .....+ .....++++|+++|+|++|.+++++..+.+.+.+++++++++++|||++++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 264 (278)
T TIGR03056 186 YYGRLIRSPAHVDGALSMMA-QWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEE 264 (278)
T ss_pred HHHHhhcCchhhhHHHHHhh-cccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCccccc
Confidence 00 0000000000000 000000 0112378999999999999999988889999999999999999999999999
Q ss_pred CchHHHHHHHHHHh
Q psy1055 240 KPDLFVDKVVDFYR 253 (256)
Q Consensus 240 ~p~~~~~~i~~fl~ 253 (256)
+|+++++.|.+|++
T Consensus 265 ~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 265 QADGVVGLILQAAE 278 (278)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999984
No 20
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=3.8e-32 Score=218.87 Aligned_cols=224 Identities=19% Similarity=0.212 Sum_probs=146.0
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHH
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAM 93 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia 93 (256)
++|||+||++++...|..+++.|++.+ +++ +||||.|+....++++++++++.+++. +++++|||||||.++
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~~~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a 79 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSAHF-TLHLVDLPGHGRSRGFGPLSLADAAEAIAAQAP----DPAIWLGWSLGGLVA 79 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhccCe-EEEEecCCcCccCCCCCCcCHHHHHHHHHHhCC----CCeEEEEEcHHHHHH
Confidence 789999999999999999999998764 444 899999977666789999888876543 689999999999999
Q ss_pred HHHHHhCCCCcccEEEEeCCCCCCCCc-h------hhHHHHHHHHHhcCc---ccc---cCCChHHHHHHHHHHHHhhcc
Q psy1055 94 MYLALANPHLVSSLIVVDISPVGVSPT-L------RHMSGLFDAMKSVNL---DEL---SGQPLHAVRKIVDKALATAVD 160 (256)
Q Consensus 94 ~~~A~~~P~~v~~lil~~~~~~~~~~~-~------~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (256)
+.+|.++|++|+++|++++.+...... . ..+..+...+..... ... ............ ..+.....
T Consensus 80 ~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 158 (245)
T TIGR01738 80 LHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDA-RALKQTLL 158 (245)
T ss_pred HHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHH-HHHHHHhh
Confidence 999999999999999998665321100 0 001111110100000 000 000000000000 00000000
Q ss_pred CCCCceeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccccc
Q psy1055 161 LKGKQIIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQ 239 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e 239 (256)
... ......+...+. .+..... ....++++|+++|+|++|..++.+..+.+++.+|++++++++++||++++|
T Consensus 159 ~~~-----~~~~~~~~~~~~-~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 232 (245)
T TIGR01738 159 ARP-----TPNVQVLQAGLE-ILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLS 232 (245)
T ss_pred ccC-----CCCHHHHHHHHH-HhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCcccc
Confidence 000 000011111111 1111000 012378999999999999999988888899999999999999999999999
Q ss_pred CchHHHHHHHHHH
Q psy1055 240 KPDLFVDKVVDFY 252 (256)
Q Consensus 240 ~p~~~~~~i~~fl 252 (256)
+|++|++.|.+|+
T Consensus 233 ~p~~~~~~i~~fi 245 (245)
T TIGR01738 233 HAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999999996
No 21
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=9.7e-32 Score=228.72 Aligned_cols=235 Identities=14% Similarity=0.181 Sum_probs=146.9
Q ss_pred CCCEEEEcCCccchh------------cHHHHHH---HH-HhhcCcee--cccccccCCCCCCCHHHHHHHHHHHHHHcC
Q psy1055 16 TKPIIIMHGLLGSKN------------NWNSLAK---AI-HRKTKKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETES 77 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~------------~w~~~~~---~l-~~~~~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~ 77 (256)
++|+|||||+.++.. .|.++++ .| +++|+++. +||||.|.. ..++++++++|+.+++++++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~-~~~~~~~~a~dl~~ll~~l~ 135 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD-VPIDTADQADAIALLLDALG 135 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-CCCCHHHHHHHHHHHHHHcC
Confidence 568999988887766 6898886 57 45544333 999998853 35789999999999999999
Q ss_pred CCce-eEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCC-hHHHHHH-H---
Q psy1055 78 IAQA-DVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQP-LHAVRKI-V--- 151 (256)
Q Consensus 78 ~~~~-~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~--- 151 (256)
++++ +||||||||+||+.+|.+||++|+++|++++++...+ ...................-.... ....+.. .
T Consensus 136 l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (343)
T PRK08775 136 IARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHP-YAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSY 214 (343)
T ss_pred CCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCH-HHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHc
Confidence 9875 7999999999999999999999999999986543211 111111111111000000000000 0000000 0
Q ss_pred --HHHHHhhccCCCC---c-ee---------------eeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCcc
Q psy1055 152 --DKALATAVDLKGK---Q-II---------------WQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIR 210 (256)
Q Consensus 152 --~~~~~~~~~~~~~---~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 210 (256)
.+.+......... . .. .......... +..... .......++++|+|+|+|++|.+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~I~~PtLvi~G~~D~~~p 292 (343)
T PRK08775 215 RTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLR-LSESID-LHRVDPEAIRVPTVVVAVEGDRLVP 292 (343)
T ss_pred CCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHH-HHHHHh-hcCCChhcCCCCeEEEEeCCCEeeC
Confidence 0000010100000 0 00 0000000000 000100 0001123789999999999999999
Q ss_pred CCChhHHhhcC-CCCeEEEecC-CCccccccCchHHHHHHHHHHhh
Q psy1055 211 QEDHPGIKSLF-PRAEITYIED-AGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 211 ~~~~~~~~~~~-~~~~~~~i~~-~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
++..+.+.+.+ |+++++++++ |||++++|+|++|++.|.+||++
T Consensus 293 ~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 293 LADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred HHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 88788888877 7999999985 99999999999999999999975
No 22
>KOG1454|consensus
Probab=99.98 E-value=4.9e-32 Score=226.91 Aligned_cols=238 Identities=22% Similarity=0.392 Sum_probs=153.6
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHHhhc-Cce--e-ccccccc-CC--CCCCCHHHHHHHHHHHHHHcCCCceeEEe
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKT-KKK--I-ARNHGDS-PH--TDVFSYAHLAEDVKYFLETESIAQADVLG 85 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~-~~~--v-~~ghG~S-~~--~~~~s~~~~a~dl~~~l~~l~~~~~~lvG 85 (256)
+.+++||||+|||+++..+|+.+++.|+++. .++ + ++|||.| .. ...|+..++++-+..++.+.+.++++|||
T Consensus 55 ~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 55 DKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEE
Confidence 3678999999999999999999999999874 223 2 8999944 33 23489999999999999999999999999
Q ss_pred eChhHHHHHHHHHhCCCCcccEEEEeC-CCCC--CCCchhhHHHHHH----HHHhcCcccccCCChHHHHHHHHHHHHhh
Q psy1055 86 HSMGGRAMMYLALANPHLVSSLIVVDI-SPVG--VSPTLRHMSGLFD----AMKSVNLDELSGQPLHAVRKIVDKALATA 158 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~~v~~lil~~~-~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
||+||++|+.+|+.+|+.|+++|++|. .+.. .+...+.....+. ...... +.. ...........+...
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~---~~~~~~~~~~~~~~~ 209 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLI--PLS---LTEPVRLVSEGLLRC 209 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcC--ccc---cccchhheeHhhhcc
Confidence 999999999999999999999996652 2211 1111111111111 111100 000 000000000111100
Q ss_pred ccC---C-C------Cceeee-eChHHHHHhhhhhccCCC---C---CCCCCCC-CCeeEEecCCCCCccCCChhHHhhc
Q psy1055 159 VDL---K-G------KQIIWQ-CNLDSLQTQFFNHMINFP---Q---PGEKTYG-GPTLFIGGGRSDFIRQEDHPGIKSL 220 (256)
Q Consensus 159 ~~~---~-~------~~~~~~-~~~~~~~~~~~~~~~~~~---~---~~~~~i~-~P~lii~G~~D~~~~~~~~~~~~~~ 220 (256)
+.. . . .....+ .......+.+...+.... . ....++. +|+|||||++|.+++.+.+..+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~ 289 (326)
T KOG1454|consen 210 LKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKK 289 (326)
T ss_pred eeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhh
Confidence 000 0 0 000000 000000000000000000 0 1123555 9999999999999999988899998
Q ss_pred CCCCeEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 221 FPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 221 ~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+|++++++|++|||.+|+|.|++|++.|..|+.+.
T Consensus 290 ~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 290 LPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999864
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=4.7e-31 Score=225.07 Aligned_cols=237 Identities=15% Similarity=0.111 Sum_probs=149.6
Q ss_pred CCCCCEEEEcCCccchhc-HHHHHHHHHhhcCcee---cccccccCCCCC--CCHHHHHHHHHHHHHHcCCC------ce
Q psy1055 14 PDTKPIIIMHGLLGSKNN-WNSLAKAIHRKTKKKI---ARNHGDSPHTDV--FSYAHLAEDVKYFLETESIA------QA 81 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~-w~~~~~~l~~~~~~~v---~~ghG~S~~~~~--~s~~~~a~dl~~~l~~l~~~------~~ 81 (256)
+..++|||+||++++... |..+++.|++.+++++ +||||.|+.... .+++++++|+.++++.+... ++
T Consensus 85 ~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~ 164 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPS 164 (349)
T ss_pred CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCE
Confidence 345689999999988765 6899999987656665 999999976433 48999999999999887543 79
Q ss_pred eEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCc--hhhHHHHHHHHHhcCccc-cc---CCChHHHHHHHHHHH
Q psy1055 82 DVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT--LRHMSGLFDAMKSVNLDE-LS---GQPLHAVRKIVDKAL 155 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~ 155 (256)
+|+||||||+|++.+|.++|++|+++|++++........ ..........+....... +. .......+....+..
T Consensus 165 ~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKM 244 (349)
T ss_pred EEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHH
Confidence 999999999999999999999999999997532211100 001111111111110000 00 000000000000011
Q ss_pred HhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC--CCCeEEEecCCC
Q psy1055 156 ATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF--PRAEITYIEDAG 233 (256)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~G 233 (256)
... . ...+............+. ...... ....++++|+|+|+|++|.+++++..+.+.+.+ ++++++++++||
T Consensus 245 ~~~-~--~~~~~~~~~~~~~~~~l~-~~~~~~-~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~g 319 (349)
T PLN02385 245 AEY-N--VIAYKDKPRLRTAVELLR-TTQEIE-MQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAY 319 (349)
T ss_pred hhc-C--cceeCCCcchHHHHHHHH-HHHHHH-HhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCe
Confidence 110 0 000000001111111111 000000 112278999999999999999998888888776 578999999999
Q ss_pred ccccccCchH----HHHHHHHHHhhc
Q psy1055 234 HWVHSQKPDL----FVDKVVDFYRSL 255 (256)
Q Consensus 234 H~~~~e~p~~----~~~~i~~fl~~~ 255 (256)
|++++|+|++ +.+.|.+||++.
T Consensus 320 H~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 320 HSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred eecccCCChhhHHHHHHHHHHHHHHh
Confidence 9999999987 888899999864
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.1e-30 Score=210.78 Aligned_cols=223 Identities=21% Similarity=0.234 Sum_probs=151.1
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC-CCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD-VFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
+.|+|||+||++.+...|..+++.|++.+ +++ +||||.|+... .++++++++|+.++++.++.++++++||||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~~~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg 90 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTPDF-RVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGG 90 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhccc-EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchH
Confidence 46789999999999999999999998764 444 89999997643 47899999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcC------------cccccCCChHHHHHHHHHHHHhh
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVN------------LDELSGQPLHAVRKIVDKALATA 158 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
++++.+|.++|++|++++++++.+.... ...+...+..+.... +............ ..+...
T Consensus 91 ~~a~~~a~~~p~~v~~li~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 164 (251)
T TIGR02427 91 LIAQGLAARRPDRVRALVLSNTAAKIGT--PESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL----DLYRNM 164 (251)
T ss_pred HHHHHHHHHCHHHhHHHhhccCccccCc--hhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH----HHHHHH
Confidence 9999999999999999999875432111 001111100000000 0000000000000 000000
Q ss_pred ccCCCCceeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccc
Q psy1055 159 VDLKGKQIIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH 237 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 237 (256)
... .........+ ..+..... ....++++|+++++|++|..++.+..+.+.+.+++.++++++++||+++
T Consensus 165 ~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 235 (251)
T TIGR02427 165 LVR--------QPPDGYAGCC-AAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPC 235 (251)
T ss_pred HHh--------cCHHHHHHHH-HHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCccc
Confidence 000 0000000000 00111000 0123678999999999999999988888999899999999999999999
Q ss_pred ccCchHHHHHHHHHHh
Q psy1055 238 SQKPDLFVDKVVDFYR 253 (256)
Q Consensus 238 ~e~p~~~~~~i~~fl~ 253 (256)
+|+|+++.+.|.+|++
T Consensus 236 ~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 236 VEQPEAFNAALRDFLR 251 (251)
T ss_pred ccChHHHHHHHHHHhC
Confidence 9999999999999984
No 25
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=1e-30 Score=222.28 Aligned_cols=239 Identities=18% Similarity=0.139 Sum_probs=140.2
Q ss_pred CCEEEEcCCccchhcHHHHH---HHHHhhcCcee---cccccccCCCC----CCCHHH-----HHHHHHH----HHHHcC
Q psy1055 17 KPIIIMHGLLGSKNNWNSLA---KAIHRKTKKKI---ARNHGDSPHTD----VFSYAH-----LAEDVKY----FLETES 77 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~---~~l~~~~~~~v---~~ghG~S~~~~----~~s~~~-----~a~dl~~----~l~~l~ 77 (256)
++||++||++++...|..++ +.|....+++| +||||.|+.+. .|++++ +++|+.+ ++++++
T Consensus 42 ~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lg 121 (339)
T PRK07581 42 NAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFG 121 (339)
T ss_pred CEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhC
Confidence 34666666776777787654 46753334554 99999997542 344433 5666665 778999
Q ss_pred CCc-eeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHh-cCccc-cc-CCChHHHHH---H
Q psy1055 78 IAQ-ADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKS-VNLDE-LS-GQPLHAVRK---I 150 (256)
Q Consensus 78 ~~~-~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~---~ 150 (256)
+++ ++||||||||+||+.+|.+||++|++||++++++...+..........+.+.. ..+.. .. ......... .
T Consensus 122 i~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (339)
T PRK07581 122 IERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARV 201 (339)
T ss_pred CCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHH
Confidence 999 58999999999999999999999999999986553211000000111111110 00000 00 000000000 0
Q ss_pred H-----HHH-HH-----------------hhccCCCCceeeeeChHHHHHhhhhhccCC---C-C--CCCCCCCCCeeEE
Q psy1055 151 V-----DKA-LA-----------------TAVDLKGKQIIWQCNLDSLQTQFFNHMINF---P-Q--PGEKTYGGPTLFI 201 (256)
Q Consensus 151 ~-----~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~~~~~i~~P~lii 201 (256)
. ... +. ..................+.......+... + . ....++++|||+|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI 281 (339)
T PRK07581 202 YAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVM 281 (339)
T ss_pred HHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEE
Confidence 0 000 00 000000000000000000000000000000 0 0 1123789999999
Q ss_pred ecCCCCCccCCChhHHhhcCCCCeEEEecC-CCccccccCchHHHHHHHHHHhhc
Q psy1055 202 GGGRSDFIRQEDHPGIKSLFPRAEITYIED-AGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 202 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~-~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+|++|.+++++..+.+++.+|+++++++++ |||++++|+|+++++.|.+||+++
T Consensus 282 ~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 282 PISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred EeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 999999999888889999999999999999 999999999999999999999875
No 26
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=2.9e-30 Score=222.20 Aligned_cols=239 Identities=15% Similarity=0.117 Sum_probs=145.9
Q ss_pred CCCCEEEEcCCccchhc-------------HHHHH----HHHHhhcCcee--ccc-ccccCCC---------------CC
Q psy1055 15 DTKPIIIMHGLLGSKNN-------------WNSLA----KAIHRKTKKKI--ARN-HGDSPHT---------------DV 59 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~-------------w~~~~----~~l~~~~~~~v--~~g-hG~S~~~---------------~~ 59 (256)
++|+|||+||+++++.. |+.++ ..++++++++. ++| ||.|+.+ ..
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 36889999999999884 77776 34466543333 777 3444221 15
Q ss_pred CCHHHHHHHHHHHHHHcCCCc-eeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHH-HHHHHHhc-Cc
Q psy1055 60 FSYAHLAEDVKYFLETESIAQ-ADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG-LFDAMKSV-NL 136 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 136 (256)
|+++++++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++.+.... ....+.. ..+..... .+
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSA-QNIAFNEVARQAILADPDW 205 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCH-HHHHHHHHHHHHHHhCCCC
Confidence 799999999999999999999 48999999999999999999999999999986553211 1001111 11111110 00
Q ss_pred c--ccc---CCChHH---HHHHH------HHHHHhhccCCC---Cc---eee-----------------eeChHHHH---
Q psy1055 137 D--ELS---GQPLHA---VRKIV------DKALATAVDLKG---KQ---IIW-----------------QCNLDSLQ--- 176 (256)
Q Consensus 137 ~--~~~---~~~~~~---~~~~~------~~~~~~~~~~~~---~~---~~~-----------------~~~~~~~~--- 176 (256)
. ... ...... .+... ...+...+.... .. +.+ ..+.....
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0 000 000000 00000 000001010000 00 000 00000000
Q ss_pred HhhhhhccCC----CC--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCC----eEEEec-CCCccccccCchHHH
Q psy1055 177 TQFFNHMINF----PQ--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA----EITYIE-DAGHWVHSQKPDLFV 245 (256)
Q Consensus 177 ~~~~~~~~~~----~~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~~~~i~-~~GH~~~~e~p~~~~ 245 (256)
..+. ..... ++ ....+|++|||+|+|++|.+++++..+.+++.++++ ++.+++ +|||++++|+|++|+
T Consensus 286 ~~~~-~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~ 364 (379)
T PRK00175 286 RALD-YFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYG 364 (379)
T ss_pred HHHH-hccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHH
Confidence 0000 00000 00 012378999999999999999999999999999987 677774 999999999999999
Q ss_pred HHHHHHHhhc
Q psy1055 246 DKVVDFYRSL 255 (256)
Q Consensus 246 ~~i~~fl~~~ 255 (256)
+.|.+||++.
T Consensus 365 ~~L~~FL~~~ 374 (379)
T PRK00175 365 RLVRAFLERA 374 (379)
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=3.5e-30 Score=219.81 Aligned_cols=238 Identities=16% Similarity=0.208 Sum_probs=146.1
Q ss_pred CCCCCEEEEcCCccchh-----------cHHHHH----HHHHhhcCcee---ccc--ccccCC-------------CCCC
Q psy1055 14 PDTKPIIIMHGLLGSKN-----------NWNSLA----KAIHRKTKKKI---ARN--HGDSPH-------------TDVF 60 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~-----------~w~~~~----~~l~~~~~~~v---~~g--hG~S~~-------------~~~~ 60 (256)
+++++|||+||+++++. .|+.++ ..+.+.| ++| +|| ||.|.. ...+
T Consensus 29 ~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~-~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~ 107 (351)
T TIGR01392 29 ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRY-FVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI 107 (351)
T ss_pred CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCce-EEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Confidence 34578999999999763 488886 3335554 454 899 565532 1147
Q ss_pred CHHHHHHHHHHHHHHcCCCc-eeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHH-HHHHHHhc-Ccc
Q psy1055 61 SYAHLAEDVKYFLETESIAQ-ADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG-LFDAMKSV-NLD 137 (256)
Q Consensus 61 s~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~ 137 (256)
+++++++|+.++++++++++ ++|+||||||++++.+|.++|++|+++|++++.+.... ....+.. ..+.+... ...
T Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 186 (351)
T TIGR01392 108 TIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSA-WCIAFNEVQRQAILADPNWN 186 (351)
T ss_pred cHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCH-HHHHHHHHHHHHHHhCCCCC
Confidence 89999999999999999999 99999999999999999999999999999987553211 1101111 11111110 000
Q ss_pred --cccCC--C---hHHHHHHH------HHHHHhhccCCCCc----------------e--------eeeeChH---HHHH
Q psy1055 138 --ELSGQ--P---LHAVRKIV------DKALATAVDLKGKQ----------------I--------IWQCNLD---SLQT 177 (256)
Q Consensus 138 --~~~~~--~---~~~~~~~~------~~~~~~~~~~~~~~----------------~--------~~~~~~~---~~~~ 177 (256)
..... + ....+... .+.+...+...... + ....+.. ....
T Consensus 187 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 266 (351)
T TIGR01392 187 DGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTR 266 (351)
T ss_pred CCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHH
Confidence 00000 0 00000000 00011111100000 0 0000000 0000
Q ss_pred hhhh-hccC-CCC--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEE-----EecCCCccccccCchHHHHHH
Q psy1055 178 QFFN-HMIN-FPQ--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEIT-----YIEDAGHWVHSQKPDLFVDKV 248 (256)
Q Consensus 178 ~~~~-~~~~-~~~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-----~i~~~GH~~~~e~p~~~~~~i 248 (256)
.+.. .+.. ... ....+|++|+|+|+|++|.+++++..+.+++.+|+++++ ++++|||++++|+|++|++.|
T Consensus 267 ~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 267 ALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred HHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 1100 0000 000 112378999999999999999999999999999998876 668999999999999999999
Q ss_pred HHHHh
Q psy1055 249 VDFYR 253 (256)
Q Consensus 249 ~~fl~ 253 (256)
.+||+
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=1.4e-30 Score=206.94 Aligned_cols=218 Identities=22% Similarity=0.324 Sum_probs=141.3
Q ss_pred EEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC---CCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHH
Q psy1055 19 IIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD---VFSYAHLAEDVKYFLETESIAQADVLGHSMGGRA 92 (256)
Q Consensus 19 iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~---~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~i 92 (256)
|||+||++++...|..+++.|++. ++++ +||||.|+... .++++++++|+.+++++++.++++|+|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARG-YRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTT-SEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCC-CEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999999999999999754 4554 89999998743 4789999999999999999999999999999999
Q ss_pred HHHHHHhCCCCcccEEEEeCCCCCCCCc-hhhHHHHHHHHHhcCcccccCCChHHHHHH-HHHHHHhhccCCCCceeeee
Q psy1055 93 MMYLALANPHLVSSLIVVDISPVGVSPT-LRHMSGLFDAMKSVNLDELSGQPLHAVRKI-VDKALATAVDLKGKQIIWQC 170 (256)
Q Consensus 93 a~~~A~~~P~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (256)
++.+|.++|++|+++|++++.+...... .......+..+................... ........+.... ..
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 154 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSR-----RA 154 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH-----HH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccc-----cc
Confidence 9999999999999999998544211000 000111111111000000000000000000 0000000000000 00
Q ss_pred ChHHHHH--hhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHH
Q psy1055 171 NLDSLQT--QFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDK 247 (256)
Q Consensus 171 ~~~~~~~--~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~ 247 (256)
..+.... ...+....+ .++++|+++++|++|..++.+..+.+.+.++++++++++++||++++|+|++|++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~-----~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 155 LAEYLRSNLWQADLSEAL-----PRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHH-----HGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccccc-----cccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 0000000 000000011 16689999999999999998888889988999999999999999999999999863
No 29
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=8.9e-29 Score=204.40 Aligned_cols=233 Identities=15% Similarity=0.120 Sum_probs=144.0
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC--CCCHHHHHHHHHHHHHHc----CCCceeEEee
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD--VFSYAHLAEDVKYFLETE----SIAQADVLGH 86 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l----~~~~~~lvGh 86 (256)
.+.|+++||++++...|..+++.|.+++++++ +||||.|+... ..++.++.+|+...++.+ ...+++|+||
T Consensus 25 ~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~ 104 (276)
T PHA02857 25 KALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGH 104 (276)
T ss_pred CEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEc
Confidence 34455669999999999999999998765565 89999997532 236677778888777654 3467999999
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHH-HHHHhcCccc-cc-CCChHHHHHHHHHHHHhhccCCC
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF-DAMKSVNLDE-LS-GQPLHAVRKIVDKALATAVDLKG 163 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
||||++|+.+|.++|++++++|++++... .... .....+ ........+. .. ............+. ..... .+
T Consensus 105 S~GG~ia~~~a~~~p~~i~~lil~~p~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~ 179 (276)
T PHA02857 105 SMGATISILAAYKNPNLFTAMILMSPLVN--AEAV-PRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEV-YKYQY-DP 179 (276)
T ss_pred CchHHHHHHHHHhCccccceEEEeccccc--cccc-cHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHH-HHHhc-CC
Confidence 99999999999999999999999864221 1111 111111 1111101110 00 00000000000010 01110 01
Q ss_pred CceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC-CCCeEEEecCCCccccccCc-
Q psy1055 164 KQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF-PRAEITYIEDAGHWVHSQKP- 241 (256)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~GH~~~~e~p- 241 (256)
................. ..... .....++++|+|+|+|++|.+++++..+.+.+.+ +++++.++++|||.++.|+|
T Consensus 180 ~~~~~~~~~~~~~~~~~-~~~~~-~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~ 257 (276)
T PHA02857 180 LVNHEKIKAGFASQVLK-ATNKV-RKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDE 257 (276)
T ss_pred CccCCCccHHHHHHHHH-HHHHH-HHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchh
Confidence 00000001110111100 00000 0112278999999999999999999988888766 57899999999999999987
Q ss_pred --hHHHHHHHHHHhhc
Q psy1055 242 --DLFVDKVVDFYRSL 255 (256)
Q Consensus 242 --~~~~~~i~~fl~~~ 255 (256)
+++.+.+.+||++.
T Consensus 258 ~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 258 VKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 57889999999864
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=3.5e-29 Score=216.54 Aligned_cols=241 Identities=19% Similarity=0.255 Sum_probs=143.2
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCCC-C-C----HHHHHHHHHHHHHHcCCCceeEE
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDV-F-S----YAHLAEDVKYFLETESIAQADVL 84 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~-~-s----~~~~a~dl~~~l~~l~~~~~~lv 84 (256)
++++++|||+||++++...|..+++.|++++.++. +||||.|++... + + .+.+++++.++++.+++++++|+
T Consensus 102 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lv 181 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILL 181 (402)
T ss_pred CCCCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 35678999999999999999999999988743333 899999976431 1 1 13467888999999999999999
Q ss_pred eeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCch--hhHHH----HHHHH-Hhc---Cccccc-----CC-ChHHHH
Q psy1055 85 GHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL--RHMSG----LFDAM-KSV---NLDELS-----GQ-PLHAVR 148 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~--~~~~~----~~~~~-~~~---~~~~~~-----~~-~~~~~~ 148 (256)
||||||++++.+|.++|++|+++|++++......... ..... ....+ ... .+.+.. .. ......
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~ 261 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVR 261 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHH
Confidence 9999999999999999999999999875432211110 00000 00000 000 000000 00 000000
Q ss_pred HHHHHHHHhhccC-----CC-C---ceeeee-----ChHHHHHhhh--hhccCCCC-CCCCCCCCCeeEEecCCCCCccC
Q psy1055 149 KIVDKALATAVDL-----KG-K---QIIWQC-----NLDSLQTQFF--NHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQ 211 (256)
Q Consensus 149 ~~~~~~~~~~~~~-----~~-~---~~~~~~-----~~~~~~~~~~--~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~ 211 (256)
......+...... .. . ++.+.+ .......... ......+. ....++++|+++|+|++|.+.+
T Consensus 262 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~- 340 (402)
T PLN02894 262 RYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY- 340 (402)
T ss_pred HHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-
Confidence 0000000000000 00 0 000000 0000000000 00001111 1123789999999999996554
Q ss_pred CChhHHhhcC-CCCeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 212 EDHPGIKSLF-PRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 212 ~~~~~~~~~~-~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
.....+.+.+ +.+++++|++|||++++|+|++|++.|.+|++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 341 EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 4455555544 468999999999999999999999999999875
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=2.9e-29 Score=206.83 Aligned_cols=230 Identities=13% Similarity=0.195 Sum_probs=149.9
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC--CCCHHHHHHHHHHHHHHcC-CCceeEEee
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD--VFSYAHLAEDVKYFLETES-IAQADVLGH 86 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l~-~~~~~lvGh 86 (256)
.+++|+|||+||++.+...|..+++.|.+.+++++ +||||.|.... .++++++++++.+++++++ .++++||||
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 35578899999999999999999999987655554 99999875432 3799999999999999985 589999999
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHH---h-c-------CcccccCCChHHHHHHHHHHH
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMK---S-V-------NLDELSGQPLHAVRKIVDKAL 155 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~---~-~-------~~~~~~~~~~~~~~~~~~~~~ 155 (256)
||||++++.++.++|++|+++|++++.+...... ........+. . . ................+...+
T Consensus 95 S~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ--TDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKI 172 (273)
T ss_pred CchHHHHHHHHHhChhheeEEEEeccccCCCCCC--HHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHH
Confidence 9999999999999999999999997543211110 1111100000 0 0 000000000000000000000
Q ss_pred HhhccCCCCceeeeeChHHHHHhhh-----hhccCCCCC--CCCCC-CCCeeEEecCCCCCccCCChhHHhhcCCCCeEE
Q psy1055 156 ATAVDLKGKQIIWQCNLDSLQTQFF-----NHMINFPQP--GEKTY-GGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEIT 227 (256)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 227 (256)
. ....+. ........+. ..+.. +.. ...++ ++|+++|+|++|..+|++..+.+.+.+++++++
T Consensus 173 ~--~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~ 243 (273)
T PLN02211 173 L--YQMSPQ------EDSTLAAMLLRPGPILALRS-ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVY 243 (273)
T ss_pred H--hcCCCH------HHHHHHHHhcCCcCcccccc-ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEE
Confidence 0 000000 0000000000 00000 000 11144 789999999999999999899999999999999
Q ss_pred EecCCCccccccCchHHHHHHHHHHhh
Q psy1055 228 YIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 228 ~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
.++ |||.+++|+|+++.++|.++...
T Consensus 244 ~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 244 ELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred EEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 996 89999999999999999998764
No 32
>KOG4409|consensus
Probab=99.97 E-value=2e-29 Score=204.84 Aligned_cols=240 Identities=19% Similarity=0.294 Sum_probs=149.4
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCce--e-cccccccCCCCC---C--CHHHHHHHHHHHHHHcCCCceeEEe
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKK--I-ARNHGDSPHTDV---F--SYAHLAEDVKYFLETESIAQADVLG 85 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~--v-~~ghG~S~~~~~---~--s~~~~a~dl~~~l~~l~~~~~~lvG 85 (256)
.+++|+|||||++++...|-.-.+.|++. +++ + ++|+|+|+++.- . -...+.+-|.++..+.+++|.+|||
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~~-~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvG 166 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAKI-RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVG 166 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhhc-CceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEee
Confidence 56789999999999999999999999984 334 2 999999988642 1 2357999999999999999999999
Q ss_pred eChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCC-ch----hhHHHHHHHHHhc--Cccccc-----C-CC---hHHHHH
Q psy1055 86 HSMGGRAMMYLALANPHLVSSLIVVDISPVGVSP-TL----RHMSGLFDAMKSV--NLDELS-----G-QP---LHAVRK 149 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~-~~----~~~~~~~~~~~~~--~~~~~~-----~-~~---~~~~~~ 149 (256)
||+||++|..||++||++|+.|||+++..+.... .. +........+... .+.++. + .. ....+.
T Consensus 167 HSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~ 246 (365)
T KOG4409|consen 167 HSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRP 246 (365)
T ss_pred ccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhH
Confidence 9999999999999999999999999854432211 10 1112222111111 111100 0 00 001111
Q ss_pred HHHHHHHhhccCCC-CceeeeeC------hHHHHHhhhh-hccCCCC---CCCCCCCCCeeEEecCCCCCccCCChhHHh
Q psy1055 150 IVDKALATAVDLKG-KQIIWQCN------LDSLQTQFFN-HMINFPQ---PGEKTYGGPTLFIGGGRSDFIRQEDHPGIK 218 (256)
Q Consensus 150 ~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~-~~~~~~~---~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 218 (256)
.....+.....++. .++.+.++ ...+...+.. .....|. +...+-+||+++|+|++| +++......+.
T Consensus 247 d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~ 325 (365)
T KOG4409|consen 247 DRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVT 325 (365)
T ss_pred HHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-cccchhHHHHH
Confidence 00000000000000 00001110 0111111100 0001111 111234699999999876 78777666665
Q ss_pred h--cCCCCeEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 219 S--LFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 219 ~--~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+ ....++.++||+|||++++|+|+.|+++|..+++..
T Consensus 326 ~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 326 KSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 5 334689999999999999999999999999999764
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=99.96 E-value=1.8e-28 Score=207.57 Aligned_cols=237 Identities=15% Similarity=0.169 Sum_probs=148.3
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC-------CCCHHHHHHHHHHHHHHc----CCCc
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD-------VFSYAHLAEDVKYFLETE----SIAQ 80 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~-------~~s~~~~a~dl~~~l~~l----~~~~ 80 (256)
.+++||++||++++...|..++..|.+.+++++ +||||.|++.. .++++++++|+.++++++ +..+
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 132 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRK 132 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCC
Confidence 356899999999999899999988877766665 89999997531 147899999999999887 6679
Q ss_pred eeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCch-hhHHHHHHHHHhc---C------cccccCCC--h---H
Q psy1055 81 ADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL-RHMSGLFDAMKSV---N------LDELSGQP--L---H 145 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~-~~~~~~~~~~~~~---~------~~~~~~~~--~---~ 145 (256)
++++||||||.+++.+|+++|++|+++|++++......... .........+... . ........ . .
T Consensus 133 ~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (330)
T PRK10749 133 RYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLT 212 (330)
T ss_pred eEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCC
Confidence 99999999999999999999999999999864321111111 1111111111110 0 00000000 0 0
Q ss_pred HHHHHHHHHHHhhccCCCCceee-eeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC---
Q psy1055 146 AVRKIVDKALATAVDLKGKQIIW-QCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF--- 221 (256)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--- 221 (256)
............ ....+. ... ............ ...... ....++++|+|+|+|++|.+++++..+.+.+.+
T Consensus 213 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~ 288 (330)
T PRK10749 213 HSRERYRRNLRF-YADDPE-LRVGGPTYHWVRESIL-AGEQVL-AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAA 288 (330)
T ss_pred CCHHHHHHHHHH-HHhCCC-cccCCCcHHHHHHHHH-HHHHHH-hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhc
Confidence 001111111111 111110 000 000111111110 000000 012278899999999999999998877776654
Q ss_pred ----CCCeEEEecCCCccccccCc---hHHHHHHHHHHhhc
Q psy1055 222 ----PRAEITYIEDAGHWVHSQKP---DLFVDKVVDFYRSL 255 (256)
Q Consensus 222 ----~~~~~~~i~~~GH~~~~e~p---~~~~~~i~~fl~~~ 255 (256)
++++++++|+|||.++.|.+ +++.+.|.+||++.
T Consensus 289 ~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 289 GHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 45689999999999999987 67888999999864
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=1.3e-28 Score=203.01 Aligned_cols=235 Identities=16% Similarity=0.236 Sum_probs=144.3
Q ss_pred CCCCEEEEcCCccchhc-HHHHHHHHHhhcCcee---cccccccCCCC----CCCHHHHHHHHHHHHHHcCCCceeEEee
Q psy1055 15 DTKPIIIMHGLLGSKNN-WNSLAKAIHRKTKKKI---ARNHGDSPHTD----VFSYAHLAEDVKYFLETESIAQADVLGH 86 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~-w~~~~~~l~~~~~~~v---~~ghG~S~~~~----~~s~~~~a~dl~~~l~~l~~~~~~lvGh 86 (256)
.++||||+||++++... |..+...+.+.+++++ +||||.|.... .++++.+++|+.++++++++++++++||
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~ 103 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGH 103 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 36899999998766554 5666667776344554 89999997542 2789999999999999999999999999
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHH--------HHHHhcCcccccCCChHHHHHHHHHHHHhh
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF--------DAMKSVNLDELSGQPLHAVRKIVDKALATA 158 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
||||.+++.+|.++|++|+++|++++.+.. +.......... +.+....... ..................
T Consensus 104 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 180 (288)
T TIGR01250 104 SWGGMLAQEYALKYGQHLKGLIISSMLDSA-PEYVKELNRLRKELPPEVRAAIKRCEASG--DYDNPEYQEAVEVFYHHL 180 (288)
T ss_pred ehHHHHHHHHHHhCccccceeeEecccccc-hHHHHHHHHHHhhcChhHHHHHHHHHhcc--CcchHHHHHHHHHHHHHh
Confidence 999999999999999999999998743321 11111000110 0000000000 000011111111111000
Q ss_pred ccCCCC--c----eeeeeChHHHHHhh-----h--hhccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCC
Q psy1055 159 VDLKGK--Q----IIWQCNLDSLQTQF-----F--NHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA 224 (256)
Q Consensus 159 ~~~~~~--~----~~~~~~~~~~~~~~-----~--~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 224 (256)
...... . .............. . ........ ....++++|+++++|++|.. +++..+.+++.++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~ 259 (288)
T TIGR01250 181 LCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS 259 (288)
T ss_pred hcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC
Confidence 000000 0 00000000000000 0 00000000 01237899999999999974 566788888989999
Q ss_pred eEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
++++++++||++++|+|++|++.|.+|++
T Consensus 260 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 260 RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999984
No 35
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=2.2e-29 Score=247.44 Aligned_cols=231 Identities=19% Similarity=0.271 Sum_probs=149.1
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCC---------CCCCHHHHHHHHHHHHHHcCCCcee
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHT---------DVFSYAHLAEDVKYFLETESIAQAD 82 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~---------~~~s~~~~a~dl~~~l~~l~~~~~~ 82 (256)
+++++|||+||++++...|.++++.|++.+++++ +||||.|+.. ..++++.+++++.++++++++++++
T Consensus 1369 ~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3468999999999999999999999987654333 9999998642 2468999999999999999999999
Q ss_pred EEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHH-----HHHHhcCccccc--CCChHHHH-----HH
Q psy1055 83 VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF-----DAMKSVNLDELS--GQPLHAVR-----KI 150 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~-----~~ 150 (256)
|+||||||.+++.+|.++|++|+++|++++.+.........+.... +.+.......+. ........ ..
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 1528 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPH 1528 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHH
Confidence 9999999999999999999999999999765532111111110000 000000000000 00000000 00
Q ss_pred HHHHHHhhccCCCCceeeeeChHHHHHhhhhhcc--CCCC--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCC---
Q psy1055 151 VDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMI--NFPQ--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPR--- 223 (256)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--- 223 (256)
+.+.+..... ..+.......+. .+. .... ....++++|+|+|+|++|..++ +.++.+.+.+++
T Consensus 1529 ~~~~~~~~~~--------~~~~~~~~~~l~-~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~ 1598 (1655)
T PLN02980 1529 FNKIVASRLL--------HKDVPSLAKLLS-DLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKE 1598 (1655)
T ss_pred HHHHHHHHHh--------cCCHHHHHHHHH-HhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccc
Confidence 0000000000 001111111111 100 0000 1123789999999999998764 455667776665
Q ss_pred ---------CeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 224 ---------AEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 224 ---------~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
++++++|+|||++++|+|++|++.|.+||.+
T Consensus 1599 ~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1599 SGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred ccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 4899999999999999999999999999986
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=5e-29 Score=200.79 Aligned_cols=224 Identities=24% Similarity=0.395 Sum_probs=145.7
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC---CCCHHHHHHH-HHHHHHHcCCCceeEEeeCh
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD---VFSYAHLAED-VKYFLETESIAQADVLGHSM 88 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~---~~s~~~~a~d-l~~~l~~l~~~~~~lvGhS~ 88 (256)
+++|||+||++++...|..+++.|++. +.++ +||||.|+... .+++++++++ +..+++.++.++++++||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPH-FRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhccc-CeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999999999999999854 4444 89999997643 3678999999 88889999989999999999
Q ss_pred hHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHH-----HHHHHHHhcCccc---------ccCC---ChHHHHHHH
Q psy1055 89 GGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMS-----GLFDAMKSVNLDE---------LSGQ---PLHAVRKIV 151 (256)
Q Consensus 89 Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---------~~~~---~~~~~~~~~ 151 (256)
||.+++.+|.++|+.|++++++++.+........... .....+....... .... .....+.
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQ-- 157 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhH--
Confidence 9999999999999999999998765432111100000 0000010000000 0000 0000000
Q ss_pred HHHHHhhccCCCCceeeeeChHHHHHhhhhh-ccCCCC--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEE
Q psy1055 152 DKALATAVDLKGKQIIWQCNLDSLQTQFFNH-MINFPQ--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITY 228 (256)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
......... +.......+... ....+. .....+++|+++|+|++|..++ +..+.+++..+++++++
T Consensus 158 -~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~ 226 (251)
T TIGR03695 158 -ALRAKRLAN---------NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVI 226 (251)
T ss_pred -HHHHhcccc---------cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEE
Confidence 000000000 001111111000 000000 0123689999999999997664 45667888889999999
Q ss_pred ecCCCccccccCchHHHHHHHHHHh
Q psy1055 229 IEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 229 i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
+|++||++++|+|+++++.|.+|++
T Consensus 227 ~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 227 IANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EcCCCCCcCccChHHHHHHHHHHhC
Confidence 9999999999999999999999984
No 37
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.3e-28 Score=207.06 Aligned_cols=234 Identities=14% Similarity=0.106 Sum_probs=143.5
Q ss_pred CCCEEEEcCCccchh-cHHHHHHHHHhhcCcee---cccccccCCCC--CCCHHHHHHHHHHHHHHcCC------CceeE
Q psy1055 16 TKPIIIMHGLLGSKN-NWNSLAKAIHRKTKKKI---ARNHGDSPHTD--VFSYAHLAEDVKYFLETESI------AQADV 83 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~-~w~~~~~~l~~~~~~~v---~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l~~------~~~~l 83 (256)
.+.|||+||++.+.. .|..++..|.+++++++ +||||.|+... ..+++.+++|+.++++.+.. .+++|
T Consensus 59 ~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l 138 (330)
T PLN02298 59 RALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFL 138 (330)
T ss_pred ceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEE
Confidence 345999999987643 46777888988766665 89999997533 25789999999999998753 36899
Q ss_pred EeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCch--hhHHHHHHHHHhc----CcccccCCChHHHHHHHHHHHHh
Q psy1055 84 LGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL--RHMSGLFDAMKSV----NLDELSGQPLHAVRKIVDKALAT 157 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
+||||||++++.+|.++|++|+++|++++......... .........+... ...+.........+......+..
T Consensus 139 ~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (330)
T PLN02298 139 YGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAK 218 (330)
T ss_pred EEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHH
Confidence 99999999999999999999999999874321111000 0111111111111 00000000000000000000100
Q ss_pred hccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC--CCCeEEEecCCCcc
Q psy1055 158 AVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF--PRAEITYIEDAGHW 235 (256)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~GH~ 235 (256)
..+..+..........+.+. ...... ....++++|+|||+|++|.+++++..+.+.+.+ ++++++++++|||+
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~ 293 (330)
T PLN02298 219 ---RNPMRYNGKPRLGTVVELLR-VTDYLG-KKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHS 293 (330)
T ss_pred ---hCccccCCCccHHHHHHHHH-HHHHHH-HhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEee
Confidence 00100110111111111111 000000 112378999999999999999999888887766 47899999999999
Q ss_pred ccccCchH----HHHHHHHHHhh
Q psy1055 236 VHSQKPDL----FVDKVVDFYRS 254 (256)
Q Consensus 236 ~~~e~p~~----~~~~i~~fl~~ 254 (256)
++.|+|+. +.+.|.+||.+
T Consensus 294 ~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 294 LLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred eecCCCHHHHHHHHHHHHHHHHH
Confidence 99999964 66778888865
No 38
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=2.2e-27 Score=203.98 Aligned_cols=229 Identities=24% Similarity=0.329 Sum_probs=145.6
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCC-CCCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHT-DVFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~-~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
+++++|||+||++++...|..++..|.+.+.++. +||||.|+.. ...+++++++++.+++++++.++++|+||||||
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg 208 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGG 208 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHH
Confidence 3468999999999999999999999988743333 8999999653 457899999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCccc--------ccCCChHHHHHHHHHHHHhhccCC
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDE--------LSGQPLHAVRKIVDKALATAVDLK 162 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 162 (256)
++++.+|.++|+++.++|++++...... ... .+...+....... ................+ ......
T Consensus 209 ~~a~~~a~~~~~~v~~lv~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 283 (371)
T PRK14875 209 AVALRLAARAPQRVASLTLIAPAGLGPE-ING---DYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLL-KYKRLD 283 (371)
T ss_pred HHHHHHHHhCchheeEEEEECcCCcCcc-cch---hHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHH-HHhccc
Confidence 9999999999999999999874322111 100 1111110000000 00000000000000000 000000
Q ss_pred CCceeeeeChHHHHHhhhhhc-cCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccC
Q psy1055 163 GKQIIWQCNLDSLQTQFFNHM-INFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQK 240 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~ 240 (256)
. ...........+.... ..... ....++++|+|+++|++|..++.+..+. ..+++++++++++||++++|+
T Consensus 284 ~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~---l~~~~~~~~~~~~gH~~~~e~ 356 (371)
T PRK14875 284 G----VDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG---LPDGVAVHVLPGAGHMPQMEA 356 (371)
T ss_pred c----HHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh---ccCCCeEEEeCCCCCChhhhC
Confidence 0 0000000000000000 00000 0122678999999999999988664433 345789999999999999999
Q ss_pred chHHHHHHHHHHhh
Q psy1055 241 PDLFVDKVVDFYRS 254 (256)
Q Consensus 241 p~~~~~~i~~fl~~ 254 (256)
|+++.+.|.+||++
T Consensus 357 p~~~~~~i~~fl~~ 370 (371)
T PRK14875 357 AADVNRLLAEFLGK 370 (371)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999975
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=7e-26 Score=189.91 Aligned_cols=235 Identities=18% Similarity=0.219 Sum_probs=138.1
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC---CCCHHHHHHHHHHHHHHcCCCceeEEeeC
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD---VFSYAHLAEDVKYFLETESIAQADVLGHS 87 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~---~~s~~~~a~dl~~~l~~l~~~~~~lvGhS 87 (256)
++++||||+||++++...| .+...+....++++ +||||.|+... .++.+++++|+..+++++++++++++|||
T Consensus 25 ~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S 103 (306)
T TIGR01249 25 PDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGS 103 (306)
T ss_pred CCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3478999999998876654 34444543334554 89999997543 35788999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchh---------hHHHHHHHHH-hcCc----cccc-------CCChHH
Q psy1055 88 MGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLR---------HMSGLFDAMK-SVNL----DELS-------GQPLHA 146 (256)
Q Consensus 88 ~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~----~~~~-------~~~~~~ 146 (256)
|||++++.+|.++|++|+++|++++...... ... ........+. .... ..+. ......
T Consensus 104 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (306)
T TIGR01249 104 WGSTLALAYAQTHPEVVTGLVLRGIFLLREK-EWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEE 182 (306)
T ss_pred HHHHHHHHHHHHChHhhhhheeeccccCCHH-HHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHH
Confidence 9999999999999999999999875432110 000 0000011110 0000 0000 000000
Q ss_pred HHHHHHHHHHh----hccCCCC-ceeeeeCh------HHHHHhhhhhccC-CC---C--CCCCCC-CCCeeEEecCCCCC
Q psy1055 147 VRKIVDKALAT----AVDLKGK-QIIWQCNL------DSLQTQFFNHMIN-FP---Q--PGEKTY-GGPTLFIGGGRSDF 208 (256)
Q Consensus 147 ~~~~~~~~~~~----~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~-~~---~--~~~~~i-~~P~lii~G~~D~~ 208 (256)
.+....+.+.. .+..... .+....+. ..+...+. .... .+ . ....++ ++|+|+|+|++|.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~ 261 (306)
T TIGR01249 183 TKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYF-VNKGFLDVENFILDNISKIRNIPTYIVHGRYDLC 261 (306)
T ss_pred HHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHH-HHhchhcCchHHHHhhhhccCCCeEEEecCCCCC
Confidence 11111111111 1111000 00000000 01110000 0000 00 0 011255 68999999999999
Q ss_pred ccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 209 IRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
+|.+..+.+++.++++++++++++||+++. | +..+.|.+|+.+
T Consensus 262 ~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~-~~~~~i~~~~~~ 304 (306)
T TIGR01249 262 CPLQSAWALHKAFPEAELKVTNNAGHSAFD--P-NNLAALVHALET 304 (306)
T ss_pred CCHHHHHHHHHhCCCCEEEEECCCCCCCCC--h-HHHHHHHHHHHH
Confidence 999889999999999999999999999863 2 345666666654
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=3.5e-26 Score=196.71 Aligned_cols=231 Identities=15% Similarity=0.138 Sum_probs=143.9
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCC--CCHHHHHHHHHHHHHHcCC----CceeEEe
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDV--FSYAHLAEDVKYFLETESI----AQADVLG 85 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~--~s~~~~a~dl~~~l~~l~~----~~~~lvG 85 (256)
..++|||+||++++...|..+++.|.+.++.++ +||||.|+.... .+++.+++|+.++++.+.. .+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 345899999999999999999999988766664 899999976532 4788999999999998753 3699999
Q ss_pred eChhHHHHHHHHHhCCC---CcccEEEEeCCCCCCCCchh---hHHHHHHHH-HhcCcccccC--CChHHHHHHHHHHHH
Q psy1055 86 HSMGGRAMMYLALANPH---LVSSLIVVDISPVGVSPTLR---HMSGLFDAM-KSVNLDELSG--QPLHAVRKIVDKALA 156 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~---~v~~lil~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~ 156 (256)
|||||.+++.+|. +|+ +|+++|+.++.. ....... ........+ ....+..... ........... .
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l-~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~---~ 289 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL-RVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALL---A 289 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECccc-ccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHH---H
Confidence 9999999997764 664 899999975322 1111110 011111111 1001110000 00000000000 1
Q ss_pred hhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC--CCeEEEecCCCc
Q psy1055 157 TAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP--RAEITYIEDAGH 234 (256)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~GH 234 (256)
. .. ++..+.............. ..... .....++++|+|+++|++|.+++++.++.+.+..+ +.+++++|+++|
T Consensus 290 ~-~~-dp~~~~g~i~~~~~~~~~~-~~~~l-~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H 365 (395)
T PLN02652 290 K-YS-DPLVYTGPIRVRTGHEILR-ISSYL-TRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLH 365 (395)
T ss_pred H-hc-CCCcccCCchHHHHHHHHH-HHHHH-HhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeE
Confidence 1 11 0100000000111111100 10000 01223789999999999999999988888876654 478999999999
Q ss_pred ccccc-CchHHHHHHHHHHhh
Q psy1055 235 WVHSQ-KPDLFVDKVVDFYRS 254 (256)
Q Consensus 235 ~~~~e-~p~~~~~~i~~fl~~ 254 (256)
.++.| +|+++.+.|.+||++
T Consensus 366 ~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 366 DLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred EeccCCCHHHHHHHHHHHHHH
Confidence 99888 799999999999985
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=8.8e-26 Score=204.73 Aligned_cols=236 Identities=19% Similarity=0.276 Sum_probs=143.1
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC---CCCHHHHHHHHHHHHHHcCCCc-eeEEee
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD---VFSYAHLAEDVKYFLETESIAQ-ADVLGH 86 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~---~~s~~~~a~dl~~~l~~l~~~~-~~lvGh 86 (256)
+++++|||+||++++...|.++++.|++.+ +++ +||||.|+... .++++++++|+.+++++++..+ ++|+||
T Consensus 23 ~~~~~ivllHG~~~~~~~w~~~~~~L~~~~-~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGh 101 (582)
T PRK05855 23 PDRPTVVLVHGYPDNHEVWDGVAPLLADRF-RVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAH 101 (582)
T ss_pred CCCCeEEEEcCCCchHHHHHHHHHHhhcce-EEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 347899999999999999999999997654 444 89999997532 4789999999999999999876 999999
Q ss_pred ChhHHHHHHHHHh--CCCCcccEEEEeCCCCCCC-C---------chhhHHHHHHHHHh-c-----CcccccCCChHHHH
Q psy1055 87 SMGGRAMMYLALA--NPHLVSSLIVVDISPVGVS-P---------TLRHMSGLFDAMKS-V-----NLDELSGQPLHAVR 148 (256)
Q Consensus 87 S~Gg~ia~~~A~~--~P~~v~~lil~~~~~~~~~-~---------~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~ 148 (256)
||||.+++.++.+ .|+++..++.+........ . ..+........+.. . ..+. .......
T Consensus 102 S~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 178 (582)
T PRK05855 102 DWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPV---LPELLWR 178 (582)
T ss_pred ChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCC---CcHHHhc
Confidence 9999999888776 3556666655432110000 0 00000000000000 0 0000 0000000
Q ss_pred HHHHHHHHh---hccCCCCc-eeeee----ChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhc
Q psy1055 149 KIVDKALAT---AVDLKGKQ-IIWQC----NLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSL 220 (256)
Q Consensus 149 ~~~~~~~~~---~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 220 (256)
......+.. ........ ..... .......................+++|+|+|+|++|.++++...+.+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~ 258 (582)
T PRK05855 179 LGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRW 258 (582)
T ss_pred cchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhcccccc
Confidence 000000111 00000000 00000 00000000000000001111235899999999999999998888888888
Q ss_pred CCCCeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 221 FPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 221 ~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
+++.++++++ +||++++|+|+++.+.|.+|+.+
T Consensus 259 ~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 259 VPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred CCcceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 8999988886 79999999999999999999975
No 42
>PLN02511 hydrolase
Probab=99.94 E-value=1e-25 Score=194.20 Aligned_cols=231 Identities=15% Similarity=0.209 Sum_probs=137.4
Q ss_pred CCCCCEEEEcCCccchhc-H-HHHHHHHHhhcCcee---cccccccCCCC-CCCHHHHHHHHHHHHHHcCC----CceeE
Q psy1055 14 PDTKPIIIMHGLLGSKNN-W-NSLAKAIHRKTKKKI---ARNHGDSPHTD-VFSYAHLAEDVKYFLETESI----AQADV 83 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~-w-~~~~~~l~~~~~~~v---~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l~~----~~~~l 83 (256)
.++|+||++||++++... | ..++..+.+.+++++ +||||+|+... .+....+++|+.+++++++. .++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~l 177 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYA 177 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEE
Confidence 456789999999877543 4 556666555555555 89999997532 23345677888888888765 58999
Q ss_pred EeeChhHHHHHHHHHhCCCC--cccEEEEeCCCCCCCCchhhHHH---------HHHHHHhcC------ccccc-CCChH
Q psy1055 84 LGHSMGGRAMMYLALANPHL--VSSLIVVDISPVGVSPTLRHMSG---------LFDAMKSVN------LDELS-GQPLH 145 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~~--v~~lil~~~~~~~~~~~~~~~~~---------~~~~~~~~~------~~~~~-~~~~~ 145 (256)
|||||||.+++.|+.++|++ |.+++++. +|.........+.. +.+.+.... +..+. .....
T Consensus 178 vG~SlGg~i~~~yl~~~~~~~~v~~~v~is-~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 256 (388)
T PLN02511 178 AGWSLGANILVNYLGEEGENCPLSGAVSLC-NPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIP 256 (388)
T ss_pred EEechhHHHHHHHHHhcCCCCCceEEEEEC-CCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHH
Confidence 99999999999999999987 88888874 33321100000000 000000000 00000 00000
Q ss_pred HHHH-HHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCCh-hHHhhcCCC
Q psy1055 146 AVRK-IVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPR 223 (256)
Q Consensus 146 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~-~~~~~~~~~ 223 (256)
.... .....+...+.... . ........+. ... ......+|++|+|+|+|++|++++.+.. ..+.+.+|+
T Consensus 257 ~~~~~~~~~~fd~~~t~~~----~--gf~~~~~yy~-~~s--~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~ 327 (388)
T PLN02511 257 LVANAKTVRDFDDGLTRVS----F--GFKSVDAYYS-NSS--SSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN 327 (388)
T ss_pred HHHhCCCHHHHHHhhhhhc----C--CCCCHHHHHH-HcC--chhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC
Confidence 0000 00000000000000 0 0000000110 000 1112337999999999999999988765 456777899
Q ss_pred CeEEEecCCCccccccCchH------HHHHHHHHHhh
Q psy1055 224 AEITYIEDAGHWVHSQKPDL------FVDKVVDFYRS 254 (256)
Q Consensus 224 ~~~~~i~~~GH~~~~e~p~~------~~~~i~~fl~~ 254 (256)
++++++++|||+.++|+|+. +.+.|.+||+.
T Consensus 328 ~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 328 CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 99999999999999999987 48999999975
No 43
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=3.2e-25 Score=190.15 Aligned_cols=196 Identities=18% Similarity=0.172 Sum_probs=118.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcee-EEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHH-HHHHHHhc--
Q psy1055 59 VFSYAHLAEDVKYFLETESIAQAD-VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG-LFDAMKSV-- 134 (256)
Q Consensus 59 ~~s~~~~a~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~-- 134 (256)
.+|+.++++++.++++++++++++ +|||||||++++.+|.+||++|+++|++.+++...+.....+.. ..+.+...
T Consensus 140 ~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~ 219 (389)
T PRK06765 140 VVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPN 219 (389)
T ss_pred cCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999997 99999999999999999999999999998655322111011111 11112111
Q ss_pred -Cccccc--CCCh---HHHHHHHH------HHHHhhccCC---CCc-e---eeeeChHHHHHh----h------------
Q psy1055 135 -NLDELS--GQPL---HAVRKIVD------KALATAVDLK---GKQ-I---IWQCNLDSLQTQ----F------------ 179 (256)
Q Consensus 135 -~~~~~~--~~~~---~~~~~~~~------~~~~~~~~~~---~~~-~---~~~~~~~~~~~~----~------------ 179 (256)
.-.... .... ...+.... +.+....... ... . ..++..+..... +
T Consensus 220 ~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l 299 (389)
T PRK06765 220 WKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYL 299 (389)
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHH
Confidence 000000 0000 01111000 0001000000 000 0 000000000000 0
Q ss_pred hhhccCCC------C--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC----CCeEEEecC-CCccccccCchHHHH
Q psy1055 180 FNHMINFP------Q--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP----RAEITYIED-AGHWVHSQKPDLFVD 246 (256)
Q Consensus 180 ~~~~~~~~------~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~-~GH~~~~e~p~~~~~ 246 (256)
.+.+..+. . ....++++|+|+|+|++|.++|++..+.+++.+| ++++++|++ +||++++|+|++|++
T Consensus 300 ~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~ 379 (389)
T PRK06765 300 AKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEK 379 (389)
T ss_pred HHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHH
Confidence 00111110 0 0123789999999999999999988888888886 689999985 999999999999999
Q ss_pred HHHHHHhh
Q psy1055 247 KVVDFYRS 254 (256)
Q Consensus 247 ~i~~fl~~ 254 (256)
.|.+||++
T Consensus 380 ~I~~FL~~ 387 (389)
T PRK06765 380 KIYEFLNR 387 (389)
T ss_pred HHHHHHcc
Confidence 99999975
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=7.1e-24 Score=161.89 Aligned_cols=220 Identities=20% Similarity=0.300 Sum_probs=149.2
Q ss_pred CCCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCC-CCCCHHHHHHHHHH---HHHHcCCCceeEE
Q psy1055 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHT-DVFSYAHLAEDVKY---FLETESIAQADVL 84 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~-~~~s~~~~a~dl~~---~l~~l~~~~~~lv 84 (256)
.++++..|+|||||+|+.+..+.+.+.|.++++.|- +||||..+.. -..++++|-+|+.+ .+...+.+++.++
T Consensus 11 f~~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~ 90 (243)
T COG1647 11 FEGGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVV 90 (243)
T ss_pred eccCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 345568999999999999999999999999977553 8999987632 22456666555554 5555578999999
Q ss_pred eeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCch---hhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccC
Q psy1055 85 GHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL---RHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDL 161 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (256)
|.||||..++.+|..+| ++++|.+. +|+...... +++..+.+.+.... ....+. +.+.+.+..+.
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~-a~~~~k~~~~iie~~l~y~~~~kk~e-----~k~~e~----~~~e~~~~~~~ 158 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMC-APVNVKSWRIIIEGLLEYFRNAKKYE-----GKDQEQ----IDKEMKSYKDT 158 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeec-CCcccccchhhhHHHHHHHHHhhhcc-----CCCHHH----HHHHHHHhhcc
Confidence 99999999999999999 99999875 454433222 22223333332211 111122 22233322211
Q ss_pred CCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC--CCeEEEecCCCcccccc
Q psy1055 162 KGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP--RAEITYIEDAGHWVHSQ 239 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~GH~~~~e 239 (256)
.. .....+.....+....+. .|..|++++.|++|+.++.+.+..+.+.+. ..++.+++++||.+-.+
T Consensus 159 ~~------~~~~~~~~~i~~~~~~~~-----~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D 227 (243)
T COG1647 159 PM------TTTAQLKKLIKDARRSLD-----KIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLD 227 (243)
T ss_pred hH------HHHHHHHHHHHHHHhhhh-----hcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecc
Confidence 00 011112221211222222 788999999999999999998888877653 46899999999999666
Q ss_pred -CchHHHHHHHHHHhh
Q psy1055 240 -KPDLFVDKVVDFYRS 254 (256)
Q Consensus 240 -~p~~~~~~i~~fl~~ 254 (256)
.-|++.+.|..||+.
T Consensus 228 ~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 228 KERDQVEEDVITFLEK 243 (243)
T ss_pred hhHHHHHHHHHHHhhC
Confidence 589999999999974
No 45
>KOG2564|consensus
Probab=99.92 E-value=2e-24 Score=169.97 Aligned_cols=231 Identities=17% Similarity=0.289 Sum_probs=151.5
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHHhhcCc-ee---cccccccCCC--CCCCHHHHHHHHHHHHHHc---CCCceeE
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKK-KI---ARNHGDSPHT--DVFSYAHLAEDVKYFLETE---SIAQADV 83 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~-~v---~~ghG~S~~~--~~~s~~~~a~dl~~~l~~l---~~~~~~l 83 (256)
...||.++++||++.+.-.|..++.+|..+-.+ ++ +||||+|.-. .+.|.+.+++|+.++++.+ ...+++|
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 457888999999999999999999999876543 33 8999998543 4579999999999999998 3467999
Q ss_pred EeeChhHHHHHHHHHh--CCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHH-HHH-------
Q psy1055 84 LGHSMGGRAMMYLALA--NPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKI-VDK------- 153 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~--~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------- 153 (256)
|||||||+||...|.. -|. +.+|++||............+..+++.... . ..+.+.+..+ ++.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~----~--F~Si~~Ai~W~v~sg~~Rn~~ 223 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPK----S--FKSIEDAIEWHVRSGQLRNRD 223 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCc----c--ccchhhHHHHHhccccccccc
Confidence 9999999999877764 476 999999996331111111111111111100 0 0011111000 000
Q ss_pred ----HHHhhcc--CCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEE
Q psy1055 154 ----ALATAVD--LKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEIT 227 (256)
Q Consensus 154 ----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 227 (256)
.+-.++. .++..+-|+.++....+.|..++..+++ ......+|.++|-.+.|.+-..-...+|+ -..++.
T Consensus 224 SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~-~Fl~~p~~klLilAg~d~LDkdLtiGQMQ---Gk~Q~~ 299 (343)
T KOG2564|consen 224 SARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSD-KFLGLPVPKLLILAGVDRLDKDLTIGQMQ---GKFQLQ 299 (343)
T ss_pred cceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhh-HhhCCCccceeEEecccccCcceeeeeec---cceeee
Confidence 0011111 1123578888888777777655555543 23356778777777766543322233333 346899
Q ss_pred EecCCCccccccCchHHHHHHHHHHhh
Q psy1055 228 YIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 228 ~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
+++.|||+++.+.|.+++..+..|..+
T Consensus 300 vL~~~GH~v~ED~P~kva~~~~~f~~R 326 (343)
T KOG2564|consen 300 VLPLCGHFVHEDSPHKVAECLCVFWIR 326 (343)
T ss_pred eecccCceeccCCcchHHHHHHHHHhh
Confidence 999999999999999999999999875
No 46
>KOG2984|consensus
Probab=99.91 E-value=5.4e-25 Score=165.44 Aligned_cols=236 Identities=20% Similarity=0.184 Sum_probs=153.2
Q ss_pred ceeccCCCC--CCCCCC-CEEEEcCCccch-hcHHHHHHHHHhhcCc-ee---cccccccCCCC-CCC---HHHHHHHHH
Q psy1055 3 FKVADTETP--VDPDTK-PIIIMHGLLGSK-NNWNSLAKAIHRKTKK-KI---ARNHGDSPHTD-VFS---YAHLAEDVK 70 (256)
Q Consensus 3 ~~~~~~~~~--~~~~~~-~iv~lHG~~~~~-~~w~~~~~~l~~~~~~-~v---~~ghG~S~~~~-~~s---~~~~a~dl~ 70 (256)
.+|-+.+.. ..++|+ .|+++.|..++. ..|.+++..|-+.-.. +| .||+|.|.++. .+. ...-|++..
T Consensus 26 v~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~av 105 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAV 105 (277)
T ss_pred eeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHH
Confidence 456666665 334554 688999987764 4588777766544322 33 79999996643 233 355677788
Q ss_pred HHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChH--HHH
Q psy1055 71 YFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLH--AVR 148 (256)
Q Consensus 71 ~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 148 (256)
.++++|..++++++|+|-||..|+..|+++|+.|.++|+.+++..-.......+..+.+.-.+..-. ..+.+ ...
T Consensus 106 dLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~---R~P~e~~Yg~ 182 (277)
T KOG2984|consen 106 DLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARG---RQPYEDHYGP 182 (277)
T ss_pred HHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhh---cchHHHhcCH
Confidence 9999999999999999999999999999999999999997653321111111111111111110000 00000 000
Q ss_pred HHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEE
Q psy1055 149 KIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITY 228 (256)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
..+.+.+.++++ .+.+....--..+-.....+++||+||++|++|++++......+....+.+++++
T Consensus 183 e~f~~~wa~wvD-------------~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~ 249 (277)
T KOG2984|consen 183 ETFRTQWAAWVD-------------VVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEI 249 (277)
T ss_pred HHHHHHHHHHHH-------------HHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEE
Confidence 111222222221 1111000000001111223899999999999999999999999999999999999
Q ss_pred ecCCCccccccCchHHHHHHHHHHhh
Q psy1055 229 IEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 229 i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
.|.++|..|+..|++|+..+.+||++
T Consensus 250 ~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 250 HPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred ccCCCcceeeechHHHHHHHHHHHhc
Confidence 99999999999999999999999986
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.90 E-value=3.3e-22 Score=164.97 Aligned_cols=228 Identities=18% Similarity=0.239 Sum_probs=134.6
Q ss_pred CCCCCCCCEEEEcCCcc----chhcHHHHHHHHHhhcCcee---cccccccCCCCCCCHHHHHHHHHHHHHHc-----CC
Q psy1055 11 PVDPDTKPIIIMHGLLG----SKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETE-----SI 78 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~----~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l-----~~ 78 (256)
|.+++++++|++||+++ +...|..+++.|+++++.++ +||||+|+... .+++++.+|+.++++.+ +.
T Consensus 21 p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-~~~~~~~~d~~~~~~~l~~~~~g~ 99 (274)
T TIGR03100 21 PGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-LGFEGIDADIAAAIDAFREAAPHL 99 (274)
T ss_pred CCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhhCCCC
Confidence 44455678999998764 44557778899998766554 89999986532 56778888888888776 56
Q ss_pred CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchh-hHHHHH-HHHHhcCc-ccc-cC-CChHHHHHHHHH
Q psy1055 79 AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLR-HMSGLF-DAMKSVNL-DEL-SG-QPLHAVRKIVDK 153 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-~~~-~~-~~~~~~~~~~~~ 153 (256)
++++++||||||.+++.+|.. +++|+++|++++.......... ....+. .......+ ..+ .+ .........+..
T Consensus 100 ~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 178 (274)
T TIGR03100 100 RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGD 178 (274)
T ss_pred CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHH
Confidence 789999999999999999865 5689999999743211111000 011111 00000000 000 00 000000111111
Q ss_pred HHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCCh------hHHhhcC--CCCe
Q psy1055 154 ALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDH------PGIKSLF--PRAE 225 (256)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~------~~~~~~~--~~~~ 225 (256)
.+..... ........ ...+... ..+. ++++|+|+++|++|...+. .. +..++.+ ++++
T Consensus 179 ~~~~~~~--~~~~~~~~---~~~~~~~---~~l~-----~~~~P~ll~~g~~D~~~~~-~~~~~~~~~~~~~~l~~~~v~ 244 (274)
T TIGR03100 179 ALLKARQ--KGDEVAHG---GLAERMK---AGLE-----RFQGPVLFILSGNDLTAQE-FADSVLGEPAWRGALEDPGIE 244 (274)
T ss_pred HHHhhhh--cCCCcccc---hHHHHHH---HHHH-----hcCCcEEEEEcCcchhHHH-HHHHhccChhhHHHhhcCCeE
Confidence 1110100 00000000 0111111 1111 5689999999999987542 22 3444434 8899
Q ss_pred EEEecCCCccccccC-chHHHHHHHHHHhh
Q psy1055 226 ITYIEDAGHWVHSQK-PDLFVDKVVDFYRS 254 (256)
Q Consensus 226 ~~~i~~~GH~~~~e~-p~~~~~~i~~fl~~ 254 (256)
++.++++||++..|. ++++.+.|.+||++
T Consensus 245 ~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 245 RVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999999996665 59999999999964
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=2.3e-22 Score=167.00 Aligned_cols=234 Identities=19% Similarity=0.229 Sum_probs=146.5
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccC-C-CC-CCCHHHHHHHHHHHHHHcCC----CceeEEee
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSP-H-TD-VFSYAHLAEDVKYFLETESI----AQADVLGH 86 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~-~-~~-~~s~~~~a~dl~~~l~~l~~----~~~~lvGh 86 (256)
..||++||.+.+..-|..+++.|...++.++ +||||.|. . .. .-+++++.+|+.++++.... .+++|+||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 6899999999999999999999999887665 89999996 2 22 23589999999999999853 58999999
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCC--chhhHHHHH-HHHHhcCcccccCCC------hHHHHHHHHHHHHh
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVDISPVGVSP--TLRHMSGLF-DAMKSVNLDELSGQP------LHAVRKIVDKALAT 157 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 157 (256)
||||.|++.++.++|..|+++||.++. ..... ....+.... .....+ .+.+.... ......... ...+
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~-~~l~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~sr~~-~~~~ 191 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPA-LGLGGAILRLILARLALKLLGRI-RPKLPVDSNLLEGVLTDDLSRDP-AEVA 191 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECcc-ccCChhHHHHHHHHHhccccccc-ccccccCcccccCcCcchhhcCH-HHHH
Confidence 999999999999999999999997532 12221 000011110 011100 00000000 000000011 1112
Q ss_pred hccCCCCceeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCcc-CCChhHHhhc--CCCCeEEEecCCC
Q psy1055 158 AVDLKGKQIIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIR-QEDHPGIKSL--FPRAEITYIEDAG 233 (256)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~-~~~~~~~~~~--~~~~~~~~i~~~G 233 (256)
.+..++. ................... .+. .....+++|+|+++|++|.+++ .+......+. .++.++++++++.
T Consensus 192 ~~~~dP~-~~~~~~~~~w~~~~~~a~~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~ 269 (298)
T COG2267 192 AYEADPL-IGVGGPVSRWVDLALLAGR-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAY 269 (298)
T ss_pred HHhcCCc-cccCCccHHHHHHHHHhhc-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcc
Confidence 2222221 0111111111111100111 111 1233789999999999999888 5555544333 4678999999999
Q ss_pred ccccccC-c--hHHHHHHHHHHhhc
Q psy1055 234 HWVHSQK-P--DLFVDKVVDFYRSL 255 (256)
Q Consensus 234 H~~~~e~-p--~~~~~~i~~fl~~~ 255 (256)
|-++.|. . +++.+.+.+|+.+.
T Consensus 270 He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 270 HELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred hhhhcCcchHHHHHHHHHHHHHHhh
Confidence 9999996 4 78999999999763
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=7e-22 Score=171.35 Aligned_cols=210 Identities=13% Similarity=0.105 Sum_probs=135.4
Q ss_pred CCCEEEEcCCccc--hhcHHHHHHHHHhhcCcee---cccccccCCCC-CCCHHHHHHHHHHHHHHc---CCCceeEEee
Q psy1055 16 TKPIIIMHGLLGS--KNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD-VFSYAHLAEDVKYFLETE---SIAQADVLGH 86 (256)
Q Consensus 16 ~~~iv~lHG~~~~--~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l---~~~~~~lvGh 86 (256)
..|+|++||+.++ ...|..+++.|++.++.++ +||||.|.... ..+.....+++.+++... +.+++.++||
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 3466666655554 3579999999998876665 89999986532 234555566777777766 5578999999
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCce
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQI 166 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
||||++++.+|..+|++++++|++++............ +.+ + .... ..+...+....
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~----~~~-----p-------~~~~----~~la~~lg~~~--- 329 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQ----QQV-----P-------EMYL----DVLASRLGMHD--- 329 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhh----hhc-----h-------HHHH----HHHHHHhCCCC---
Confidence 99999999999999999999999864221110000000 000 0 0000 00111110000
Q ss_pred eeeeChHHHHHhhhhhcc-CCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHH
Q psy1055 167 IWQCNLDSLQTQFFNHMI-NFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFV 245 (256)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~ 245 (256)
.....+...+. .+. ........++++|+|+|+|++|.++|++..+.+++..|++++.++|++ ++.|.|+++.
T Consensus 330 ---~~~~~l~~~l~-~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~ 402 (414)
T PRK05077 330 ---ASDEALRVELN-RYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKAL 402 (414)
T ss_pred ---CChHHHHHHhh-hccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHH
Confidence 00011111110 000 000000136899999999999999999999988998999999999987 6778999999
Q ss_pred HHHHHHHhhc
Q psy1055 246 DKVVDFYRSL 255 (256)
Q Consensus 246 ~~i~~fl~~~ 255 (256)
+.|.+||++.
T Consensus 403 ~~i~~wL~~~ 412 (414)
T PRK05077 403 QEISDWLEDR 412 (414)
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=3.3e-22 Score=168.92 Aligned_cols=231 Identities=16% Similarity=0.236 Sum_probs=131.8
Q ss_pred CCCCCEEEEcCCccchhc--HHHHHHHHHhhcCcee---cccccccCCC--CCC---CHHHHHHHHHHHHHHcCCCceeE
Q psy1055 14 PDTKPIIIMHGLLGSKNN--WNSLAKAIHRKTKKKI---ARNHGDSPHT--DVF---SYAHLAEDVKYFLETESIAQADV 83 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~--w~~~~~~l~~~~~~~v---~~ghG~S~~~--~~~---s~~~~a~dl~~~l~~l~~~~~~l 83 (256)
++.++||++||++++... +..++..|.+.+++++ +||||.|+.. ..+ ..++....+..+.++++.+++++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~ 135 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAA 135 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEE
Confidence 346789999999887543 4678889998877665 8999987532 112 23444444444555567789999
Q ss_pred EeeChhHHHHHHHHHhCCCC--cccEEEEeCCCCCCCCchhhHHH----HHH-----HHHhcC------cccccCCChHH
Q psy1055 84 LGHSMGGRAMMYLALANPHL--VSSLIVVDISPVGVSPTLRHMSG----LFD-----AMKSVN------LDELSGQPLHA 146 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~~--v~~lil~~~~~~~~~~~~~~~~~----~~~-----~~~~~~------~~~~~~~~~~~ 146 (256)
+||||||.+++.++.++++. ++++|++++ |.........+.. ..+ .+.... ...........
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~-p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 214 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSA-PLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQ 214 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcC-CCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHH
Confidence 99999999988888887654 889998864 3221111000000 000 000000 00000000000
Q ss_pred HHHH-HHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCe
Q psy1055 147 VRKI-VDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAE 225 (256)
Q Consensus 147 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 225 (256)
.... ....+.+....... ........+. ..... ....++++|+++|+|++|++++++..+.+.+..++++
T Consensus 215 ~~~~~~~~~fd~~~~~~~~------g~~~~~~~y~-~~~~~--~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~ 285 (324)
T PRK10985 215 LKSVRRLREFDDLITARIH------GFADAIDYYR-QCSAL--PLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVE 285 (324)
T ss_pred HhcCCcHHHHhhhheeccC------CCCCHHHHHH-HCChH--HHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeE
Confidence 0000 00000000000000 0000111110 00000 1123789999999999999999888877878889999
Q ss_pred EEEecCCCccccccCc-----hHHHHHHHHHHhh
Q psy1055 226 ITYIEDAGHWVHSQKP-----DLFVDKVVDFYRS 254 (256)
Q Consensus 226 ~~~i~~~GH~~~~e~p-----~~~~~~i~~fl~~ 254 (256)
++++++|||+.++|.. --..+.+.+|+..
T Consensus 286 ~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 286 YQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred EEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 9999999999999853 2455777777754
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.88 E-value=1.2e-21 Score=165.78 Aligned_cols=233 Identities=13% Similarity=0.142 Sum_probs=137.0
Q ss_pred CCCEEEEcCCccchhc-H-------------------------HHHHHHHHhhcCcee---cccccccCCC---CC--CC
Q psy1055 16 TKPIIIMHGLLGSKNN-W-------------------------NSLAKAIHRKTKKKI---ARNHGDSPHT---DV--FS 61 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~-w-------------------------~~~~~~l~~~~~~~v---~~ghG~S~~~---~~--~s 61 (256)
...||++||++.+... + ..+++.|.+.++.++ +||||+|+.. .. .+
T Consensus 21 kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~ 100 (332)
T TIGR01607 21 IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINC 100 (332)
T ss_pred eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchhh
Confidence 3489999999988751 1 357899988777665 8999998742 11 37
Q ss_pred HHHHHHHHHHHHHHcC------------------------CCceeEEeeChhHHHHHHHHHhCCC--------CcccEEE
Q psy1055 62 YAHLAEDVKYFLETES------------------------IAQADVLGHSMGGRAMMYLALANPH--------LVSSLIV 109 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~------------------------~~~~~lvGhS~Gg~ia~~~A~~~P~--------~v~~lil 109 (256)
++++++|+..+++... -.+++|+||||||+|++.++.++++ .++++|+
T Consensus 101 ~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~ 180 (332)
T TIGR01607 101 FDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCIS 180 (332)
T ss_pred HHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEE
Confidence 8999999999998642 2368999999999999999887653 5888887
Q ss_pred EeCCCC----CCCC--chh-hHHHHHHHHHhcCcccccCCC-hHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhh
Q psy1055 110 VDISPV----GVSP--TLR-HMSGLFDAMKSVNLDELSGQP-LHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFN 181 (256)
Q Consensus 110 ~~~~~~----~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (256)
+.+... +.+. ... .....+..+.... +.+.... ....+ .....+....++-.+............+.
T Consensus 181 ~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~---~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~- 255 (332)
T TIGR01607 181 LSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVF-PTFRISKKIRYEK---SPYVNDIIKFDKFRYDGGITFNLASELIK- 255 (332)
T ss_pred eccceEEecccCCCcchhhhhHHHHHHHHHHHC-CcccccCcccccc---ChhhhhHHhcCccccCCcccHHHHHHHHH-
Confidence 643210 0000 000 1111222221111 1100000 00000 00011111111100000111111111111
Q ss_pred hccCC-CCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC--CCCeEEEecCCCccccccC-chHHHHHHHHHHh
Q psy1055 182 HMINF-PQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF--PRAEITYIEDAGHWVHSQK-PDLFVDKVVDFYR 253 (256)
Q Consensus 182 ~~~~~-~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~GH~~~~e~-p~~~~~~i~~fl~ 253 (256)
..... ........++|+|+|+|++|.+++++..+.+.+.. ++.+++++++++|.++.|. ++++.+.|.+||+
T Consensus 256 ~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 256 ATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 10000 00111123799999999999999988777776543 5789999999999999996 7999999999986
No 52
>KOG1455|consensus
Probab=99.87 E-value=6.3e-21 Score=152.73 Aligned_cols=240 Identities=13% Similarity=0.144 Sum_probs=147.1
Q ss_pred CCCCCCCC--CCCEEEEcCCccch-hcHHHHHHHHHhhcCcee---cccccccCCCCC--CCHHHHHHHHHHHHHHc---
Q psy1055 8 TETPVDPD--TKPIIIMHGLLGSK-NNWNSLAKAIHRKTKKKI---ARNHGDSPHTDV--FSYAHLAEDVKYFLETE--- 76 (256)
Q Consensus 8 ~~~~~~~~--~~~iv~lHG~~~~~-~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~--~s~~~~a~dl~~~l~~l--- 76 (256)
-|.|..+. ..-|+|+||++... ..+...+..|+..++-+. .+|||.|+.... .+.+..++|+..+.+..
T Consensus 44 ~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~ 123 (313)
T KOG1455|consen 44 SWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKER 123 (313)
T ss_pred ecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhc
Confidence 35664432 23588899999865 677889999998876554 899999986443 47899999999998863
Q ss_pred ---CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCch------hhHHHHHHH-HHhcCcccccCCChHH
Q psy1055 77 ---SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL------RHMSGLFDA-MKSVNLDELSGQPLHA 146 (256)
Q Consensus 77 ---~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~ 146 (256)
...+..|.||||||+|++.++.++|+...++|++.+.- ...... ..+...+.. +.++...+ +...
T Consensus 124 ~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc-~i~~~~kp~p~v~~~l~~l~~liP~wk~vp----~~d~ 198 (313)
T KOG1455|consen 124 EENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMC-KISEDTKPHPPVISILTLLSKLIPTWKIVP----TKDI 198 (313)
T ss_pred cccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeeccc-ccCCccCCCcHHHHHHHHHHHhCCceeecC----Cccc
Confidence 22357799999999999999999999999999986321 111111 111111211 11111111 0000
Q ss_pred HHHHHHHH-HHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC--C
Q psy1055 147 VRKIVDKA-LATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP--R 223 (256)
Q Consensus 147 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~ 223 (256)
.....++. ....+..++--+.-........+.++ .-.++. ....++++|.+|++|++|.+.+++.++.+.+..+ +
T Consensus 199 ~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr-~~~~le-~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~D 276 (313)
T KOG1455|consen 199 IDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLR-VTADLE-KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSD 276 (313)
T ss_pred cccccCCHHHHHHhhcCCceecCCccHHHHHHHHH-HHHHHH-HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCC
Confidence 11111111 11122222210111111122222221 111111 1223889999999999999999999998877753 6
Q ss_pred CeEEEecCCCccccc-cCc---hHHHHHHHHHHhh
Q psy1055 224 AEITYIEDAGHWVHS-QKP---DLFVDKVVDFYRS 254 (256)
Q Consensus 224 ~~~~~i~~~GH~~~~-e~p---~~~~~~i~~fl~~ 254 (256)
.++.++|+.-|.++. |-+ +.|..-|.+||++
T Consensus 277 KTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 277 KTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred CceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 789999999999986 443 4555667777765
No 53
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=1e-20 Score=152.53 Aligned_cols=233 Identities=22% Similarity=0.354 Sum_probs=136.0
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhc--Ccee---cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKT--KKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~--~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
+++++|+||++++...|......+.... +.++ +||||.|... .++...+++++..++++++..+++++||||||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 99 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPA-GYSLSAYADDLAALLDALGLEKVVLVGHSMGG 99 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcc-cccHHHHHHHHHHHHHHhCCCceEEEEecccH
Confidence 5599999999999999988444444321 2333 8899999611 24555569999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCCCCCCCc-------h-hhHHHHHHHHHhcCcccccCCChHHHHHH-HHHHHHhh---
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISPVGVSPT-------L-RHMSGLFDAMKSVNLDELSGQPLHAVRKI-VDKALATA--- 158 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 158 (256)
.+++.++.++|++++++|+++......... . ................. ........ ........
T Consensus 100 ~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 175 (282)
T COG0596 100 AVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAA----FAALLAALGLLAALAAAARA 175 (282)
T ss_pred HHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhh----hhhhhhcccccccccccchh
Confidence 999999999999999999998543200000 0 00000000000000000 00000000 00000000
Q ss_pred -ccCCCCceeeeeChHHHHHh--------hhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCC-CeEEE
Q psy1055 159 -VDLKGKQIIWQCNLDSLQTQ--------FFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPR-AEITY 228 (256)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~ 228 (256)
.................... ...............+++|+++++|++|...+......+.+..++ +++.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T COG0596 176 GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVV 255 (282)
T ss_pred ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEE
Confidence 00000000000000000000 000000000012236789999999999955554445667777785 99999
Q ss_pred ecCCCccccccCchHHHHHHHHHHh
Q psy1055 229 IEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 229 i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
++++||++++|+|+++++.+.+|++
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHHh
Confidence 9999999999999999999999554
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=2e-20 Score=145.95 Aligned_cols=181 Identities=13% Similarity=0.151 Sum_probs=120.7
Q ss_pred CCEEEEcCCccchhcHHH--HHHHHHhh--cCcee---cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChh
Q psy1055 17 KPIIIMHGLLGSKNNWNS--LAKAIHRK--TKKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMG 89 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~--~~~~l~~~--~~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~G 89 (256)
|+||||||++++...|.. +.+.+++. .++++ +|||| +++++++.+++++++.++++++|||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~~~~~lvG~S~G 71 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLEHGGDPLGLVGSSLG 71 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 689999999999999984 45667653 23343 78875 468899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCceeee
Q psy1055 90 GRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQ 169 (256)
Q Consensus 90 g~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (256)
|++++.+|.++|. ++|+++++.. + .+....+ +.. .... . ....+.
T Consensus 72 g~~a~~~a~~~~~---~~vl~~~~~~--~--~~~~~~~---~~~-~~~~--------------------~--~~~~~~-- 116 (190)
T PRK11071 72 GYYATWLSQCFML---PAVVVNPAVR--P--FELLTDY---LGE-NENP--------------------Y--TGQQYV-- 116 (190)
T ss_pred HHHHHHHHHHcCC---CEEEECCCCC--H--HHHHHHh---cCC-cccc--------------------c--CCCcEE--
Confidence 9999999999993 4677764221 0 0111111 000 0000 0 000011
Q ss_pred eChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHH
Q psy1055 170 CNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVV 249 (256)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 249 (256)
.....+... ..+. .......+|+++|+|++|..+|.+.+..+.+ +++.+++++++|.. +..+++.+.+.
T Consensus 117 ~~~~~~~d~-----~~~~-~~~i~~~~~v~iihg~~De~V~~~~a~~~~~---~~~~~~~~ggdH~f--~~~~~~~~~i~ 185 (190)
T PRK11071 117 LESRHIYDL-----KVMQ-IDPLESPDLIWLLQQTGDEVLDYRQAVAYYA---ACRQTVEEGGNHAF--VGFERYFNQIV 185 (190)
T ss_pred EcHHHHHHH-----HhcC-CccCCChhhEEEEEeCCCCcCCHHHHHHHHH---hcceEEECCCCcch--hhHHHhHHHHH
Confidence 111111111 1011 0111357789999999999999888877776 56788999999998 55599999999
Q ss_pred HHHh
Q psy1055 250 DFYR 253 (256)
Q Consensus 250 ~fl~ 253 (256)
+|+.
T Consensus 186 ~fl~ 189 (190)
T PRK11071 186 DFLG 189 (190)
T ss_pred HHhc
Confidence 9985
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.87 E-value=5.7e-23 Score=164.37 Aligned_cols=196 Identities=20% Similarity=0.213 Sum_probs=120.0
Q ss_pred cccccccCC-----CCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCC-CCCCch
Q psy1055 48 ARNHGDSPH-----TDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPV-GVSPTL 121 (256)
Q Consensus 48 ~~ghG~S~~-----~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~-~~~~~~ 121 (256)
.||+|.|++ ...++.+++++++..+++++++++++++||||||.+++.+|+++|++|+++|++++.+. ......
T Consensus 8 ~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 87 (230)
T PF00561_consen 8 LRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDLPDGLWN 87 (230)
T ss_dssp CTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHHHHHHHH
T ss_pred CCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccchhhhhH
Confidence 899999985 23478999999999999999999999999999999999999999999999999875310 000000
Q ss_pred hhHHH-HH-HHHHhcCccccc-CCCh--HHHH---HHHH---------HHHHhhccCCCCceeeeeC-hHHHHHhhh--h
Q psy1055 122 RHMSG-LF-DAMKSVNLDELS-GQPL--HAVR---KIVD---------KALATAVDLKGKQIIWQCN-LDSLQTQFF--N 181 (256)
Q Consensus 122 ~~~~~-~~-~~~~~~~~~~~~-~~~~--~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~ 181 (256)
..+.. .+ ..+......... .... .... .... +.......... .....+. .......+. +
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 166 (230)
T PF00561_consen 88 RIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA-ETDAFDNMFWNALGYFSVWD 166 (230)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH-HHHHHhhhcccccccccccc
Confidence 00111 00 000000000000 0000 0000 0000 00000000000 0000000 000000000 0
Q ss_pred hccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHH
Q psy1055 182 HMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVV 249 (256)
Q Consensus 182 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~ 249 (256)
... ....+++|+++++|++|.++|++....+.+.+|+.++++++++||+.++|.|+++.+.|.
T Consensus 167 ~~~-----~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 167 PSP-----ALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHH-----HHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccc-----cccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 001 112689999999999999999998889999999999999999999999999999999886
No 56
>PRK10566 esterase; Provisional
Probab=99.84 E-value=9.4e-20 Score=148.28 Aligned_cols=199 Identities=16% Similarity=0.178 Sum_probs=118.9
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCC-CCCCH-------HHHHHHHHHHHHH---c---C
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHT-DVFSY-------AHLAEDVKYFLET---E---S 77 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~-~~~s~-------~~~a~dl~~~l~~---l---~ 77 (256)
..|.|||+||++++...|..+++.|++.++.++ +||||.+... ...++ ....+|+.++++. . +
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLL 105 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 457899999999999999999999998766665 8999975321 11111 1123333333332 2 3
Q ss_pred CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHh
Q psy1055 78 IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALAT 157 (256)
Q Consensus 78 ~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
.+++.++||||||.+++.++.++|+....++++++.. +....+.+ +++. ..............
T Consensus 106 ~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~----~~~~-~~~~~~~~~~~~~~--- 168 (249)
T PRK10566 106 DDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY---------FTSLARTL----FPPL-IPETAAQQAEFNNI--- 168 (249)
T ss_pred ccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH---------HHHHHHHh----cccc-cccccccHHHHHHH---
Confidence 4689999999999999999999997544444443211 01111110 1110 00000000000000
Q ss_pred hccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCC-CCCeeEEecCCCCCccCCChhHHhhcCCC------CeEEEec
Q psy1055 158 AVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTY-GGPTLFIGGGRSDFIRQEDHPGIKSLFPR------AEITYIE 230 (256)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~------~~~~~i~ 230 (256)
. ..+. ... +.....++ ++|+|+|+|++|..++.+.++.+.+.++. +++.+++
T Consensus 169 -~-----------------~~~~-~~~--~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~ 227 (249)
T PRK10566 169 -V-----------------APLA-EWE--VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEP 227 (249)
T ss_pred -H-----------------HHHh-hcC--hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecC
Confidence 0 0000 000 00001144 68999999999999999888887776532 4677889
Q ss_pred CCCccccccCchHHHHHHHHHHhhc
Q psy1055 231 DAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 231 ~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
++||... | +..+.+.+||++.
T Consensus 228 ~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 228 GVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred CCCCccC---H-HHHHHHHHHHHhh
Confidence 9999864 3 4578999999875
No 57
>PLN02872 triacylglycerol lipase
Probab=99.83 E-value=1.3e-19 Score=155.55 Aligned_cols=234 Identities=17% Similarity=0.261 Sum_probs=136.0
Q ss_pred CCCCEEEEcCCccchhcHH------HHHHHHHhhcCcee---cccccccC-------CCC---CCCHHHHH-HHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWN------SLAKAIHRKTKKKI---ARNHGDSP-------HTD---VFSYAHLA-EDVKYFLE 74 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~------~~~~~l~~~~~~~v---~~ghG~S~-------~~~---~~s~~~~a-~dl~~~l~ 74 (256)
+++||||+||++++...|. .++..|++.++.++ .||++.|. ... .+++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4689999999999999884 35557888766664 89976542 111 36888888 89999999
Q ss_pred Hc---CCCceeEEeeChhHHHHHHHHHhCCC---CcccEEEEeCCCCCCCCchhhHH-H----HHHHH-HhcCcccccCC
Q psy1055 75 TE---SIAQADVLGHSMGGRAMMYLALANPH---LVSSLIVVDISPVGVSPTLRHMS-G----LFDAM-KSVNLDELSGQ 142 (256)
Q Consensus 75 ~l---~~~~~~lvGhS~Gg~ia~~~A~~~P~---~v~~lil~~~~~~~~~~~~~~~~-~----~~~~~-~~~~~~~~~~~ 142 (256)
++ ..+++++|||||||.+++.++ .+|+ +|++++++.+... .......+. . .+..+ ......++...
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY-LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh-hccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 86 347899999999999998544 6887 6777777653221 100000110 0 01111 11111111000
Q ss_pred ChHHHHHHHHH----------HHHhhc------c---------CCC-----------------Ccee-eeeChHHHHHhh
Q psy1055 143 PLHAVRKIVDK----------ALATAV------D---------LKG-----------------KQII-WQCNLDSLQTQF 179 (256)
Q Consensus 143 ~~~~~~~~~~~----------~~~~~~------~---------~~~-----------------~~~~-~~~~~~~~~~~~ 179 (256)
.......... .+.... + ..+ +.+. +.+.... +...
T Consensus 231 -~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~-n~~~ 308 (395)
T PLN02872 231 -SDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFK-NLKL 308 (395)
T ss_pred -cHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchh-hHHH
Confidence 0000000000 000000 0 000 0000 0000000 0000
Q ss_pred hhhccCCC-CCCCCCC--CCCeeEEecCCCCCccCCChhHHhhcCCC-CeEEEecCCCcc---ccccCchHHHHHHHHHH
Q psy1055 180 FNHMINFP-QPGEKTY--GGPTLFIGGGRSDFIRQEDHPGIKSLFPR-AEITYIEDAGHW---VHSQKPDLFVDKVVDFY 252 (256)
Q Consensus 180 ~~~~~~~~-~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~GH~---~~~e~p~~~~~~i~~fl 252 (256)
+ . ...| .-...++ ++|+++++|++|.+++++..+.+.+.+++ .+++.++++||. ...|.|+++.+.|.+|+
T Consensus 309 Y-g-~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL 386 (395)
T PLN02872 309 Y-G-QVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFF 386 (395)
T ss_pred h-C-CCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHH
Confidence 0 0 0112 1223355 68999999999999998888888888876 688899999996 45589999999999999
Q ss_pred hh
Q psy1055 253 RS 254 (256)
Q Consensus 253 ~~ 254 (256)
++
T Consensus 387 ~~ 388 (395)
T PLN02872 387 RS 388 (395)
T ss_pred HH
Confidence 86
No 58
>PRK13604 luxD acyl transferase; Provisional
Probab=99.82 E-value=4e-19 Score=145.76 Aligned_cols=207 Identities=14% Similarity=0.188 Sum_probs=122.3
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccc-cccCCCC-CCCHHHHHHHHHH---HHHHcCCCceeEEee
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNH-GDSPHTD-VFSYAHLAEDVKY---FLETESIAQADVLGH 86 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~gh-G~S~~~~-~~s~~~~a~dl~~---~l~~l~~~~~~lvGh 86 (256)
..+.||++||++++...+..+++.|.++++.++ .||| |+|+... ..+......|+.+ +++..+.+++.|+||
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~ 115 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAA 115 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEEE
Confidence 346799999999988778999999999988776 6787 8886532 2344334566644 444446678999999
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHH-HHhcC--cccccCCChHH-H--HHH-HHHHHHhhc
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDA-MKSVN--LDELSGQPLHA-V--RKI-VDKALATAV 159 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~-~--~~~-~~~~~~~~~ 159 (256)
||||.+|+..|...| ++.+|+. +|... +...++. +...+ ++. ....... . ... ....+....
T Consensus 116 SmGgava~~~A~~~~--v~~lI~~--sp~~~------l~d~l~~~~~~~~~~~p~-~~lp~~~d~~g~~l~~~~f~~~~~ 184 (307)
T PRK13604 116 SLSARIAYEVINEID--LSFLITA--VGVVN------LRDTLERALGYDYLSLPI-DELPEDLDFEGHNLGSEVFVTDCF 184 (307)
T ss_pred CHHHHHHHHHhcCCC--CCEEEEc--CCccc------HHHHHHHhhhcccccCcc-cccccccccccccccHHHHHHHHH
Confidence 999999977776443 7777763 34321 1111111 11000 000 0000000 0 000 000000000
Q ss_pred cCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC--CCeEEEecCCCcccc
Q psy1055 160 DLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP--RAEITYIEDAGHWVH 237 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~GH~~~ 237 (256)
. ..+......+ ....++++|+|+|+|++|.+++.+.++.+.+.++ +++++++|+++|...
T Consensus 185 ~-----~~~~~~~s~i-------------~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 185 K-----HGWDTLDSTI-------------NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred h-----cCccccccHH-------------HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 0 0000000000 0112567999999999999999999988888664 789999999999876
Q ss_pred ccCchHHHHHHHHHHhhc
Q psy1055 238 SQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 238 ~e~p~~~~~~i~~fl~~~ 255 (256)
.- .-++++|.+++
T Consensus 247 ~~-----~~~~~~~~~~~ 259 (307)
T PRK13604 247 EN-----LVVLRNFYQSV 259 (307)
T ss_pred cc-----hHHHHHHHHHH
Confidence 43 34566676653
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.82 E-value=1.5e-18 Score=148.14 Aligned_cols=234 Identities=14% Similarity=0.162 Sum_probs=134.4
Q ss_pred CCCCEEEEcCCccchhc-----HHHHHHHHHhhcCcee---cccccccCCCCCCCHHHHHH-----HHHHHHHHcCCCce
Q psy1055 15 DTKPIIIMHGLLGSKNN-----WNSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAHLAE-----DVKYFLETESIAQA 81 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~-----w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~~a~-----dl~~~l~~l~~~~~ 81 (256)
.++|||++||+..+... |+.+++.|.++++.++ .+|+|.|+.. .++++++. .+..+++..+.+++
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~--~~~~d~~~~~~~~~v~~l~~~~~~~~i 138 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY--LTLDDYINGYIDKCVDYICRTSKLDQI 138 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc--CCHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 35689999998655444 4689999998876664 7888877543 35555543 34456666788999
Q ss_pred eEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCch-------h--hHHHHHHHHHh----------cCcccccCC
Q psy1055 82 DVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL-------R--HMSGLFDAMKS----------VNLDELSGQ 142 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~-------~--~~~~~~~~~~~----------~~~~~~~~~ 142 (256)
+++||||||.+++.+++.+|++|+++|++++ |....... + ......+.... ..+.+. ..
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~-~~ 216 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPDKIKNLVTMVT-PVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPF-SL 216 (350)
T ss_pred cEEEECHHHHHHHHHHHhCchheeeEEEecc-ccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcc-hh
Confidence 9999999999999999999999999999864 33211100 0 00111110000 000000 00
Q ss_pred ChHHHHH---------HHHH--HHHhhccCCCCceeeeeChHHHHHhhhhh-ccC--CC----CCCCCCCCCCeeEEecC
Q psy1055 143 PLHAVRK---------IVDK--ALATAVDLKGKQIIWQCNLDSLQTQFFNH-MIN--FP----QPGEKTYGGPTLFIGGG 204 (256)
Q Consensus 143 ~~~~~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~----~~~~~~i~~P~lii~G~ 204 (256)
....... ...+ .+..+..... ........+.+...+... +.. +. .....++++|+++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~-~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~ 295 (350)
T TIGR01836 217 GYQKYVNLVDILEDERKVENFLRMEKWIFDSP-DQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAE 295 (350)
T ss_pred hhHHHHHHHHhcCChHHHHHHHHHHHHhcCCc-CccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecC
Confidence 0000000 0000 0001111100 000000001111111100 000 00 01233789999999999
Q ss_pred CCCCccCCChhHHhhcCCC--CeEEEecCCCccccccCc---hHHHHHHHHHHhh
Q psy1055 205 RSDFIRQEDHPGIKSLFPR--AEITYIEDAGHWVHSQKP---DLFVDKVVDFYRS 254 (256)
Q Consensus 205 ~D~~~~~~~~~~~~~~~~~--~~~~~i~~~GH~~~~e~p---~~~~~~i~~fl~~ 254 (256)
+|.+++++..+.+.+.+++ .++++++ +||+..+..+ +++.+.|.+||.+
T Consensus 296 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 296 RDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 9999999888888888764 4566676 7999977754 8999999999975
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.82 E-value=3.3e-19 Score=170.35 Aligned_cols=240 Identities=16% Similarity=0.212 Sum_probs=142.1
Q ss_pred CCCCCEEEEcCCccchhcHHHH-----HHHHHhhcCceecccccccCCCC---CCCHHHHHHHHHHHHHH---cCCCcee
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSL-----AKAIHRKTKKKIARNHGDSPHTD---VFSYAHLAEDVKYFLET---ESIAQAD 82 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~-----~~~l~~~~~~~v~~ghG~S~~~~---~~s~~~~a~dl~~~l~~---l~~~~~~ 82 (256)
..++||||+||++.+...|+.+ ++.|.+.+++++...+|.|+... .+++.+++..+.+.++. +..++++
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~ 144 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVH 144 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceE
Confidence 4679999999999999999975 88898877677655578776542 24667766666666554 4457899
Q ss_pred EEeeChhHHHHHHHHHhC-CCCcccEEEEeCCC-CCCC-C-chh-hH-H---HH-HHH-HHhcCccccc------CCChH
Q psy1055 83 VLGHSMGGRAMMYLALAN-PHLVSSLIVVDISP-VGVS-P-TLR-HM-S---GL-FDA-MKSVNLDELS------GQPLH 145 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~-P~~v~~lil~~~~~-~~~~-~-~~~-~~-~---~~-~~~-~~~~~~~~~~------~~~~~ 145 (256)
||||||||.+++.+|+.+ |++|+++|++++.. +... . ... .. . .+ .+. +.....+... .....
T Consensus 145 lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~ 224 (994)
T PRK07868 145 LVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPV 224 (994)
T ss_pred EEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChh
Confidence 999999999999998755 56899999987532 1000 0 000 00 0 00 000 0111111000 00000
Q ss_pred HHHHHHHHHHHhhccCCC------------Cceee-eeChHHHH---Hhhhh--hccC--CC--C--CCCCCCCCCeeEE
Q psy1055 146 AVRKIVDKALATAVDLKG------------KQIIW-QCNLDSLQ---TQFFN--HMIN--FP--Q--PGEKTYGGPTLFI 201 (256)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~---~~~~~--~~~~--~~--~--~~~~~i~~P~lii 201 (256)
........ +.+.+.... ....| ...-.... ..+.. .+.. +. . ....+|++|+|+|
T Consensus 225 ~~~~~~~~-~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i 303 (994)
T PRK07868 225 KTAKARVD-FLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAF 303 (994)
T ss_pred HHHHHHHH-HHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEE
Confidence 00000000 011111000 00001 11111111 11110 0100 00 0 1235889999999
Q ss_pred ecCCCCCccCCChhHHhhcCCCCeE-EEecCCCcccccc---CchHHHHHHHHHHhh
Q psy1055 202 GGGRSDFIRQEDHPGIKSLFPRAEI-TYIEDAGHWVHSQ---KPDLFVDKVVDFYRS 254 (256)
Q Consensus 202 ~G~~D~~~~~~~~~~~~~~~~~~~~-~~i~~~GH~~~~e---~p~~~~~~i~~fl~~ 254 (256)
+|++|.+++++..+.+++.+|++++ +++++|||+.++- -|+++...|.+||.+
T Consensus 304 ~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 304 VGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred EeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 9999999999999999999999997 6889999998654 588999999999975
No 61
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.82 E-value=1.2e-18 Score=153.81 Aligned_cols=228 Identities=13% Similarity=0.128 Sum_probs=137.7
Q ss_pred CCCCEEEEcCCccchhcHH-----HHHHHHHhhcCcee---cccccccCCC---CCCCHHHHHHHHHHHHHHcCCCceeE
Q psy1055 15 DTKPIIIMHGLLGSKNNWN-----SLAKAIHRKTKKKI---ARNHGDSPHT---DVFSYAHLAEDVKYFLETESIAQADV 83 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~-----~~~~~l~~~~~~~v---~~ghG~S~~~---~~~s~~~~a~dl~~~l~~l~~~~~~l 83 (256)
.++|||++||+......|+ .++..|.+++++++ +||+|.|... .+|..+.+.+.|.++++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 5789999999998888886 79999998877664 8999988553 23545667788889999999999999
Q ss_pred EeeChhHHHH---H-HHHHhC-CCCcccEEEEeCCCCC-CCCchh------hHHHHHHHHHhcC-ccc-cc--CCCh-HH
Q psy1055 84 LGHSMGGRAM---M-YLALAN-PHLVSSLIVVDISPVG-VSPTLR------HMSGLFDAMKSVN-LDE-LS--GQPL-HA 146 (256)
Q Consensus 84 vGhS~Gg~ia---~-~~A~~~-P~~v~~lil~~~~~~~-~~~~~~------~~~~~~~~~~~~~-~~~-~~--~~~~-~~ 146 (256)
+||||||.++ + .+++.+ |++|++++++++..-. ...... .+....+.+.... ++. .+ .+.. ..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp 346 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRE 346 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcCh
Confidence 9999999985 2 356665 8899999999753211 111100 1111111111111 110 00 0000 00
Q ss_pred HHHHHHHHHHhhccCCC-Cc---eeeee-----ChHHHHHhh----hh-hcc--CCC----CCCCCCCCCCeeEEecCCC
Q psy1055 147 VRKIVDKALATAVDLKG-KQ---IIWQC-----NLDSLQTQF----FN-HMI--NFP----QPGEKTYGGPTLFIGGGRS 206 (256)
Q Consensus 147 ~~~~~~~~~~~~~~~~~-~~---~~~~~-----~~~~~~~~~----~~-~~~--~~~----~~~~~~i~~P~lii~G~~D 206 (256)
........+..++.... .. .+|.. ......+.+ .+ .+. .+. .....+|++|+++|+|++|
T Consensus 347 ~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D 426 (532)
T TIGR01838 347 NDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATRED 426 (532)
T ss_pred hhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCC
Confidence 00001111112221111 00 01110 111111111 11 110 000 0233488999999999999
Q ss_pred CCccCCChhHHhhcCCCCeEEEecCCCccccccCch
Q psy1055 207 DFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPD 242 (256)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 242 (256)
.+++.+....+.+.+++.+..+++++||.+++|+|.
T Consensus 427 ~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 427 HIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 999998888899999999999999999999999985
No 62
>PRK11460 putative hydrolase; Provisional
Probab=99.74 E-value=8e-17 Score=129.64 Aligned_cols=172 Identities=14% Similarity=0.186 Sum_probs=112.7
Q ss_pred CCCCCCCCEEEEcCCccchhcHHHHHHHHHhhcC--cee-cccccccCC------------CCCCC---HHHHHHHHHH-
Q psy1055 11 PVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK--KKI-ARNHGDSPH------------TDVFS---YAHLAEDVKY- 71 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~--~~v-~~ghG~S~~------------~~~~s---~~~~a~dl~~- 71 (256)
|..+..+.|||+||++++...|.++++.|.+.+. .++ .+|+..+.. ..... +....+.+.+
T Consensus 11 ~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 11 PDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 4455567899999999999999999999987642 233 566532211 00111 2222233333
Q ss_pred ---HHHHcCC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHH
Q psy1055 72 ---FLETESI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHA 146 (256)
Q Consensus 72 ---~l~~l~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (256)
+.++.++ ++++|+|||+||.+++.++.++|+.+.+++.+.. . . .. ..
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg-~--~-------------------~~---~~--- 142 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG-R--Y-------------------AS---LP--- 142 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc-c--c-------------------cc---cc---
Confidence 3344455 4799999999999999999999987777765421 0 0 00 00
Q ss_pred HHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC----C
Q psy1055 147 VRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF----P 222 (256)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~ 222 (256)
. . + ..+.|+++++|++|+++|.+..+.+.+.+ .
T Consensus 143 --------------~-~-----------------------~-----~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 143 --------------E-T-----------------------A-----PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred --------------c-c-----------------------c-----cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 0 0 0 12469999999999999988777665544 2
Q ss_pred CCeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 223 RAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 223 ~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
++++++++++||.+..+.-+...+-+.++|.
T Consensus 180 ~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 180 DVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred CeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 4678889999999976555555555555553
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.72 E-value=5.2e-17 Score=132.34 Aligned_cols=97 Identities=14% Similarity=0.083 Sum_probs=80.0
Q ss_pred CCCEEEEcCCccc----hhcHHHHHHHHHhhcCcee---cccccccCCC-CCCCHHHHHHHHHHH---HHHcCCCceeEE
Q psy1055 16 TKPIIIMHGLLGS----KNNWNSLAKAIHRKTKKKI---ARNHGDSPHT-DVFSYAHLAEDVKYF---LETESIAQADVL 84 (256)
Q Consensus 16 ~~~iv~lHG~~~~----~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~-~~~s~~~~a~dl~~~---l~~l~~~~~~lv 84 (256)
.++|||+||++++ ...|..+++.|++.++.++ +||||+|+.. ...+++.+++|+.++ +++.+.++++|+
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~Lv 104 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLW 104 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4578999999864 4568888999998766665 8999999653 346788888887764 555577899999
Q ss_pred eeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 85 GHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
||||||.+++.+|.++|++++++|++++
T Consensus 105 G~SmGG~vAl~~A~~~p~~v~~lVL~~P 132 (266)
T TIGR03101 105 GLRLGALLALDAANPLAAKCNRLVLWQP 132 (266)
T ss_pred EECHHHHHHHHHHHhCccccceEEEecc
Confidence 9999999999999999999999999863
No 64
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.72 E-value=6.5e-16 Score=123.27 Aligned_cols=96 Identities=21% Similarity=0.345 Sum_probs=84.7
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCC--CCHHHHHHHHHHHHHHcCCC-ceeEEeeChhH
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDV--FSYAHLAEDVKYFLETESIA-QADVLGHSMGG 90 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~--~s~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg 90 (256)
.+||-+||.+||+..|+-+.+.|.+.+-|+| +||+|.++..+. |+-.+.+.-+.++++.++++ +.+++|||.||
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 3689999999999999999999999887776 999999877544 67788999999999999996 57789999999
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
-.|+.+|..+| +.+++|+++..
T Consensus 116 enal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCc
Confidence 99999999996 67999998543
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.71 E-value=3.2e-17 Score=122.12 Aligned_cols=141 Identities=25% Similarity=0.436 Sum_probs=102.8
Q ss_pred CEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHH
Q psy1055 18 PIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMM 94 (256)
Q Consensus 18 ~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 94 (256)
+|||+||++++...|..++..|+++++.++ +|++|.+.... ..+++.+++. .+..+.+++.|+|||+||.+++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~ 76 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD--AVERVLADIR--AGYPDPDRIILIGHSMGGAIAA 76 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH--HHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH--HHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHH
Confidence 589999999999999999999999866555 78888762211 1222222222 1123678999999999999999
Q ss_pred HHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCceeeeeChHH
Q psy1055 95 YLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDS 174 (256)
Q Consensus 95 ~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
.++.++ .+++++|++++ . + . . +.
T Consensus 77 ~~~~~~-~~v~~~v~~~~--~--~-------------------~------------------------~---------~~ 99 (145)
T PF12695_consen 77 NLAARN-PRVKAVVLLSP--Y--P-------------------D------------------------S---------ED 99 (145)
T ss_dssp HHHHHS-TTESEEEEESE--S--S-------------------G------------------------C---------HH
T ss_pred HHhhhc-cceeEEEEecC--c--c-------------------c------------------------h---------hh
Confidence 999998 78999999753 0 0 0 0 00
Q ss_pred HHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC-CCeEEEecCCCcc
Q psy1055 175 LQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP-RAEITYIEDAGHW 235 (256)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~ 235 (256)
+. +.++|+++++|++|..++.+..+.+.+.++ +.+++++++++|+
T Consensus 100 ----~~------------~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 ----LA------------KIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----HT------------TTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----hh------------ccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 00 234599999999999999888887766665 6899999999995
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=4.3e-15 Score=116.36 Aligned_cols=215 Identities=12% Similarity=0.123 Sum_probs=140.9
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCce-e-cccccccC-CCCCCCHHHHHHHHHHHHHH-cCCCceeEEeeChhHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKK-I-ARNHGDSP-HTDVFSYAHLAEDVKYFLET-ESIAQADVLGHSMGGR 91 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~-v-~~ghG~S~-~~~~~s~~~~a~dl~~~l~~-l~~~~~~lvGhS~Gg~ 91 (256)
..-++++|=-|+++..|+.+...|......+ | +||+|.-- .+...+++.+|+.|..-+.. .--+++.+.||||||+
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~ 86 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGAM 86 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhHH
Confidence 4568999999999999999999888754334 3 89998653 33446899999999988883 4446899999999999
Q ss_pred HHHHHHHhCC---CCcccEEEEeCCCCCCCC--c--hhhHHHHHHHHHhcC-cccccCCChHHHHHHHHHHHHhhccCCC
Q psy1055 92 AMMYLALANP---HLVSSLIVVDISPVGVSP--T--LRHMSGLFDAMKSVN-LDELSGQPLHAVRKIVDKALATAVDLKG 163 (256)
Q Consensus 92 ia~~~A~~~P---~~v~~lil~~~~~~~~~~--~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
+|.++|.+.- -....++++++.+..... . ...-..+++.+..+. .++ ......+.+..+...
T Consensus 87 lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~-e~led~El~~l~LPi--------- 156 (244)
T COG3208 87 LAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPP-ELLEDPELMALFLPI--------- 156 (244)
T ss_pred HHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCCh-HHhcCHHHHHHHHHH---------
Confidence 9999997532 236778777654321111 0 011223444443332 111 000111122211111
Q ss_pred CceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC-CCeEEEecCCCccccccCch
Q psy1055 164 KQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP-RAEITYIEDAGHWVHSQKPD 242 (256)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~p~ 242 (256)
+.+.++ ....+.-.....+.||+.++.|++|..++.+....+++.-. ..++++++ +||+...++.+
T Consensus 157 -----------lRAD~~-~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~ 223 (244)
T COG3208 157 -----------LRADFR-ALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQRE 223 (244)
T ss_pred -----------HHHHHH-HhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHH
Confidence 111111 11111101112678999999999999999888888888765 68999998 59999999999
Q ss_pred HHHHHHHHHHh
Q psy1055 243 LFVDKVVDFYR 253 (256)
Q Consensus 243 ~~~~~i~~fl~ 253 (256)
++.+.|.+.+.
T Consensus 224 ~v~~~i~~~l~ 234 (244)
T COG3208 224 EVLARLEQHLA 234 (244)
T ss_pred HHHHHHHHHhh
Confidence 99999999885
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.67 E-value=2.7e-15 Score=123.94 Aligned_cols=97 Identities=18% Similarity=0.283 Sum_probs=70.0
Q ss_pred CCCCEEEEcCCccchhcHHHH--HHHHHh-hcCcee---c--ccccccCCC---------------------CCCCHH-H
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSL--AKAIHR-KTKKKI---A--RNHGDSPHT---------------------DVFSYA-H 64 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~--~~~l~~-~~~~~v---~--~ghG~S~~~---------------------~~~s~~-~ 64 (256)
..|.|+|+||++++...|... +..+++ .+..+| . +|+|.+... ..+++. .
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 457899999999999988543 445554 334444 2 555533210 013333 4
Q ss_pred HHHHHHHHHHH---cCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 65 LAEDVKYFLET---ESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 65 ~a~dl~~~l~~---l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
.+++|..++++ ++.+++.++||||||++|+.+|.++|+.+++++++.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 170 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFA 170 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEEC
Confidence 57888888887 355689999999999999999999999999999875
No 68
>PLN02442 S-formylglutathione hydrolase
Probab=99.66 E-value=3.5e-15 Score=123.63 Aligned_cols=97 Identities=18% Similarity=0.292 Sum_probs=64.8
Q ss_pred CCCCEEEEcCCccchhcHHHH---HHHHHhhcCcee---ccccc-----ccCC---------------C-----C--CCC
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSL---AKAIHRKTKKKI---ARNHG-----DSPH---------------T-----D--VFS 61 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~---~~~l~~~~~~~v---~~ghG-----~S~~---------------~-----~--~~s 61 (256)
..|.|+|+||++++...|... ...+...+..+| ..++| .+.. . . .+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 456788999999988888543 344454444444 23344 1100 0 0 011
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
.+++.+.+..+.+.++.++++|+||||||..|+.+|.++|+++++++.+.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 175 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFA 175 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEEC
Confidence 23444445555555677899999999999999999999999999998875
No 69
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=2.2e-15 Score=124.46 Aligned_cols=194 Identities=15% Similarity=0.185 Sum_probs=116.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcee-EEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHH-HHHHhcC-
Q psy1055 59 VFSYAHLAEDVKYFLETESIAQAD-VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF-DAMKSVN- 135 (256)
Q Consensus 59 ~~s~~~~a~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~-~~~~~~~- 135 (256)
.+|+.|+++--..++++||++++. +||-||||+.|++.|+.|||+|+++|.+.+++. .......+.... +++....
T Consensus 126 ~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r-~s~~~ia~~~~~r~AI~~DP~ 204 (368)
T COG2021 126 VITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAAR-LSAQNIAFNEVQRQAIEADPD 204 (368)
T ss_pred cccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccccc-CCHHHHHHHHHHHHHHHhCCC
Confidence 368889998889999999999977 899999999999999999999999999876442 222212222221 1111110
Q ss_pred c--ccccC--C---ChHHHHHHH------HHHHHhhccC----CC------------------CceeeeeChHHHHHhhh
Q psy1055 136 L--DELSG--Q---PLHAVRKIV------DKALATAVDL----KG------------------KQIIWQCNLDSLQTQFF 180 (256)
Q Consensus 136 ~--~~~~~--~---~~~~~~~~~------~~~~~~~~~~----~~------------------~~~~~~~~~~~~~~~~~ 180 (256)
+ ..... . ....+|... .+.+.+.... ++ ..+..+++...... +.
T Consensus 205 ~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~-lt 283 (368)
T COG2021 205 WNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLY-LT 283 (368)
T ss_pred ccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHH-HH
Confidence 0 00000 0 011111110 0111111110 00 00000111000000 00
Q ss_pred hhccCCCC-C-------CCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCe-EEEe-cCCCccccccCchHHHHHHHH
Q psy1055 181 NHMINFPQ-P-------GEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAE-ITYI-EDAGHWVHSQKPDLFVDKVVD 250 (256)
Q Consensus 181 ~~~~~~~~-~-------~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~~i-~~~GH~~~~e~p~~~~~~i~~ 250 (256)
+.+..+.. . .+.++++|+|++.=+.|.++|++..+.+.+.++.+. +++| ...||-.++...+.+...|..
T Consensus 284 ~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~ 363 (368)
T COG2021 284 RALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRK 363 (368)
T ss_pred HHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHH
Confidence 11111111 1 134789999999999999999999999999988776 6555 678999999999999999999
Q ss_pred HHhh
Q psy1055 251 FYRS 254 (256)
Q Consensus 251 fl~~ 254 (256)
||+.
T Consensus 364 fL~~ 367 (368)
T COG2021 364 FLAL 367 (368)
T ss_pred Hhhc
Confidence 9975
No 70
>KOG2931|consensus
Probab=99.64 E-value=2.5e-14 Score=114.12 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=145.2
Q ss_pred eeccCCCCCCCCCCCEEEEcCCccchhc-HHHH-----HHHHHhhcCcee---ccccccc--CCCCC---CCHHHHHHHH
Q psy1055 4 KVADTETPVDPDTKPIIIMHGLLGSKNN-WNSL-----AKAIHRKTKKKI---ARNHGDS--PHTDV---FSYAHLAEDV 69 (256)
Q Consensus 4 ~~~~~~~~~~~~~~~iv~lHG~~~~~~~-w~~~-----~~~l~~~~~~~v---~~ghG~S--~~~~~---~s~~~~a~dl 69 (256)
+|.-...|.+ .+|.|+=.|..+.|+.. |..+ +..+.++ +++. .|||-.- .-+.. .|.+++|++|
T Consensus 35 ~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l 112 (326)
T KOG2931|consen 35 HVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADML 112 (326)
T ss_pred EEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHH
Confidence 4444434433 46667779999998776 5543 4566666 4443 7888542 22222 4889999999
Q ss_pred HHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHh-----cCccc-----c
Q psy1055 70 KYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKS-----VNLDE-----L 139 (256)
Q Consensus 70 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~ 139 (256)
..++++++++.++-+|--.|++|-..+|+.||++|.+||||++.+.... + +++..+.+.. ..+.. +
T Consensus 113 ~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g-w---iew~~~K~~s~~l~~~Gmt~~~~d~l 188 (326)
T KOG2931|consen 113 PEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG-W---IEWAYNKVSSNLLYYYGMTQGVKDYL 188 (326)
T ss_pred HHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch-H---HHHHHHHHHHHHHHhhchhhhHHHHH
Confidence 9999999999999999999999999999999999999999997664322 1 1122211110 00000 0
Q ss_pred c----CCChHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCC-C--CCCCCCCCeeEEecCCCCCccCC
Q psy1055 140 S----GQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQ-P--GEKTYGGPTLFIGGGRSDFIRQE 212 (256)
Q Consensus 140 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~i~~P~lii~G~~D~~~~~~ 212 (256)
. +.........+.+.++..+.+..+ ..|+..+.+++. ...+++. . ....++||+|++-|+.++.+..
T Consensus 189 l~H~Fg~e~~~~~~diVq~Yr~~l~~~~N----~~Nl~~fl~ayn-~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~- 262 (326)
T KOG2931|consen 189 LAHHFGKEELGNNSDIVQEYRQHLGERLN----PKNLALFLNAYN-GRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSA- 262 (326)
T ss_pred HHHHhccccccccHHHHHHHHHHHHhcCC----hhHHHHHHHHhc-CCCCccccCCCcCccccccEEEEecCCCchhhh-
Confidence 0 000000111222333333332211 012222222221 1122221 0 1115679999999999876653
Q ss_pred ChhHHhhcC--CCCeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 213 DHPGIKSLF--PRAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 213 ~~~~~~~~~--~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
.-.+...+ .+..+..+.+||=.+..|||.++++.++=|++
T Consensus 263 -vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 263 -VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred -hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 33444333 35788899999999999999999999999986
No 71
>KOG4667|consensus
Probab=99.64 E-value=1.3e-14 Score=110.78 Aligned_cols=213 Identities=17% Similarity=0.252 Sum_probs=132.3
Q ss_pred CCCCCEEEEcCCccchh--cHHHHHHHHHhhcCcee---cccccccCCCCCC-CHHHHHHHHHHHHHHcCCC-c--eeEE
Q psy1055 14 PDTKPIIIMHGLLGSKN--NWNSLAKAIHRKTKKKI---ARNHGDSPHTDVF-SYAHLAEDVKYFLETESIA-Q--ADVL 84 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~--~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~-s~~~~a~dl~~~l~~l~~~-~--~~lv 84 (256)
++...+|++||+-++.+ ....++.+|++.+.... ++|-|+|...-.| ++...|+|+..+++++.-. + -+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 44567999999988654 45678888988754443 8999999775443 5677789999999999543 3 4579
Q ss_pred eeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCC-
Q psy1055 85 GHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKG- 163 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (256)
|||-||.+++.||.++++ ++-+|.+.... ... ..+. +++. + ..-..+.+ +-.++..+
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRy--dl~------~~I~--eRlg--~-------~~l~~ike--~Gfid~~~r 168 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRY--DLK------NGIN--ERLG--E-------DYLERIKE--QGFIDVGPR 168 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEccccc--chh------cchh--hhhc--c-------cHHHHHHh--CCceecCcc
Confidence 999999999999999998 66666542111 100 0000 0000 0 00000000 11111111
Q ss_pred -CceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCch
Q psy1055 164 -KQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPD 242 (256)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 242 (256)
+.+.++.....+...+...+. +.-.....+||+|-++|..|.++|.+.+..+++.+|+-++++||+|-|.-...+-+
T Consensus 169 kG~y~~rvt~eSlmdrLntd~h--~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 169 KGKYGYRVTEESLMDRLNTDIH--EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred cCCcCceecHHHHHHHHhchhh--hhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhh
Confidence 223333222222222211111 00011256899999999999999999999999999999999999999998655433
Q ss_pred HHHHHHHHH
Q psy1055 243 LFVDKVVDF 251 (256)
Q Consensus 243 ~~~~~i~~f 251 (256)
...+...|
T Consensus 247 -l~~lgl~f 254 (269)
T KOG4667|consen 247 -LVSLGLEF 254 (269)
T ss_pred -Hhhhccee
Confidence 33444443
No 72
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.62 E-value=5.1e-14 Score=114.77 Aligned_cols=238 Identities=20% Similarity=0.298 Sum_probs=126.4
Q ss_pred CCCCCCCCCEEEEcCCccchhc--HHHHHHHHHhhcCcee---cccccccCCC-CCCCHHHHHHHHHHHHHHc----CCC
Q psy1055 10 TPVDPDTKPIIIMHGLLGSKNN--WNSLAKAIHRKTKKKI---ARNHGDSPHT-DVFSYAHLAEDVKYFLETE----SIA 79 (256)
Q Consensus 10 ~~~~~~~~~iv~lHG~~~~~~~--w~~~~~~l~~~~~~~v---~~ghG~S~~~-~~~s~~~~a~dl~~~l~~l----~~~ 79 (256)
.|.+...|.||++||+.|+.++ -+.++..+.+.++.+| .|||+++... +...-..+.+|+..+++.+ .-.
T Consensus 69 ~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r 148 (345)
T COG0429 69 DPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPR 148 (345)
T ss_pred CccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCC
Confidence 3667778899999999886554 3567777887776554 8999988653 2221223336666666555 456
Q ss_pred ceeEEeeChhH-HHHHHHHHhCCC-CcccEEEEeCCCCCC-------CCch--hhHHHHH-HHHH---hcCccccc-CCC
Q psy1055 80 QADVLGHSMGG-RAMMYLALANPH-LVSSLIVVDISPVGV-------SPTL--RHMSGLF-DAMK---SVNLDELS-GQP 143 (256)
Q Consensus 80 ~~~lvGhS~Gg-~ia~~~A~~~P~-~v~~lil~~~~~~~~-------~~~~--~~~~~~~-~~~~---~~~~~~~~-~~~ 143 (256)
++..||.|+|| +++..++.+--+ .+.+.+.+. .|... .... .-+.+++ +.+. ...+..+- ...
T Consensus 149 ~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs-~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p 227 (345)
T COG0429 149 PLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVS-APFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLP 227 (345)
T ss_pred ceEEEEecccHHHHHHHHHhhccCcccceeeeee-CHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccC
Confidence 89999999999 777777764322 233433332 23211 0000 0000100 0000 00000000 000
Q ss_pred hHHHHHHHHHHHHhhccCCCCcee-eeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhh-cC
Q psy1055 144 LHAVRKIVDKALATAVDLKGKQII-WQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKS-LF 221 (256)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~-~~ 221 (256)
... ....+..+. +.+....+. ...........++ .-...+ ...+|.+|+|||+..+|++++++....... ..
T Consensus 228 ~~~--~~~ik~~~t-i~eFD~~~Tap~~Gf~da~dYYr-~aSs~~--~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n 301 (345)
T COG0429 228 GTV--LAAIKRCRT-IREFDDLLTAPLHGFADAEDYYR-QASSLP--LLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLN 301 (345)
T ss_pred cHH--HHHHHhhch-HHhccceeeecccCCCcHHHHHH-hccccc--cccccccceEEEecCCCCCCChhhCCcchhcCC
Confidence 000 000000000 000000000 0000111111221 111222 123899999999999999999877666655 67
Q ss_pred CCCeEEEecCCCcccccc----Cch-HHHHHHHHHHhh
Q psy1055 222 PRAEITYIEDAGHWVHSQ----KPD-LFVDKVVDFYRS 254 (256)
Q Consensus 222 ~~~~~~~i~~~GH~~~~e----~p~-~~~~~i~~fl~~ 254 (256)
|++.+.+-+.+||.-++. +|. -..+.+.+|++.
T Consensus 302 p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 302 PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 899999999999999988 443 455777777764
No 73
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.62 E-value=1.2e-14 Score=117.20 Aligned_cols=227 Identities=16% Similarity=0.209 Sum_probs=123.2
Q ss_pred CCCCEEEEcCCccchhc-HHHHH-----HHHHhhcCcee---ccccccc--CCCCC---CCHHHHHHHHHHHHHHcCCCc
Q psy1055 15 DTKPIIIMHGLLGSKNN-WNSLA-----KAIHRKTKKKI---ARNHGDS--PHTDV---FSYAHLAEDVKYFLETESIAQ 80 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~-w~~~~-----~~l~~~~~~~v---~~ghG~S--~~~~~---~s~~~~a~dl~~~l~~l~~~~ 80 (256)
+.|+||=.|-.+.|+.. |..+. ..+.++ ++++ .|||..- +-+.. .|.+++|++|.+++++++++.
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~ 100 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKS 100 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccE
Confidence 57788889999998877 66543 345554 3443 8998652 22322 378999999999999999999
Q ss_pred eeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCccc--ccC----------CChHH--
Q psy1055 81 ADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDE--LSG----------QPLHA-- 146 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~-- 146 (256)
++-+|--.|++|-..+|..||++|.+|||+++.+.... -+++..+.+..+.+.. ... +....
T Consensus 101 vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g----w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~ 176 (283)
T PF03096_consen 101 VIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG----WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEE 176 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-------HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHH
T ss_pred EEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc----HHHHHHHHHhcccccccccccchHHhhhhccccccccc
Confidence 99999999999999999999999999999986553221 1223333322111110 000 00000
Q ss_pred HHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC-C-CC
Q psy1055 147 VRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF-P-RA 224 (256)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~-~~ 224 (256)
....+.+.++..+.+... ..|.....+++. ...++. .......||+|++.|+.++.... ...+...+ | .+
T Consensus 177 ~n~Dlv~~yr~~l~~~~N----p~Nl~~f~~sy~-~R~DL~-~~~~~~~c~vLlvvG~~Sp~~~~--vv~~ns~Ldp~~t 248 (283)
T PF03096_consen 177 NNSDLVQTYRQHLDERIN----PKNLALFLNSYN-SRTDLS-IERPSLGCPVLLVVGDNSPHVDD--VVEMNSKLDPTKT 248 (283)
T ss_dssp CT-HHHHHHHHHHHT-TT----HHHHHHHHHHHH-T------SECTTCCS-EEEEEETTSTTHHH--HHHHHHHS-CCCE
T ss_pred ccHHHHHHHHHHHhcCCC----HHHHHHHHHHHh-ccccch-hhcCCCCCCeEEEEecCCcchhh--HHHHHhhcCcccc
Confidence 000111222222221111 011122222221 111222 12235579999999999876653 34554444 3 56
Q ss_pred eEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
++..+++||=.+..|||+++++.++=||+-
T Consensus 249 tllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 249 TLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp EEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred eEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 789999999999999999999999999874
No 74
>PLN00021 chlorophyllase
Probab=99.62 E-value=3e-14 Score=119.08 Aligned_cols=97 Identities=19% Similarity=0.205 Sum_probs=67.9
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCCCCHHH---HHHHHHHHHHH-------cCCCc
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAH---LAEDVKYFLET-------ESIAQ 80 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~---~a~dl~~~l~~-------l~~~~ 80 (256)
+..|+|||+||++.+...|..+++.|+++++.++ ++|++.+.. ...+++ ..+.+.+.+++ .+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~--~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG--TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc--hhhHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 4567899999999999999999999998866665 455432211 122322 22233322222 24468
Q ss_pred eeEEeeChhHHHHHHHHHhCCC-----CcccEEEEeC
Q psy1055 81 ADVLGHSMGGRAMMYLALANPH-----LVSSLIVVDI 112 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~~P~-----~v~~lil~~~ 112 (256)
++|+||||||.+++.+|.++|+ +++++|++++
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 9999999999999999999885 5788888763
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.61 E-value=5.2e-15 Score=127.57 Aligned_cols=102 Identities=18% Similarity=0.246 Sum_probs=78.5
Q ss_pred CCCCCCCEEEEcCCccch--hcHHH-HHHHHHh---hcCcee--cccccccCCCC-CCCHHHHHHHHHHHHHHc------
Q psy1055 12 VDPDTKPIIIMHGLLGSK--NNWNS-LAKAIHR---KTKKKI--ARNHGDSPHTD-VFSYAHLAEDVKYFLETE------ 76 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~--~~w~~-~~~~l~~---~~~~~v--~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l------ 76 (256)
.++++|++|+|||++++. ..|.+ +++.|.+ .+++++ .+|||.|.... ......+++++.++++.+
T Consensus 37 Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 37 FNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred cCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 456789999999998754 45765 5665542 233333 89999886543 233467778888888765
Q ss_pred CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCC
Q psy1055 77 SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDIS 113 (256)
Q Consensus 77 ~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~ 113 (256)
++++++||||||||.||..++.++|++|.+++++|++
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 4689999999999999999999999999999999964
No 76
>KOG1552|consensus
Probab=99.59 E-value=6.6e-14 Score=110.45 Aligned_cols=185 Identities=14% Similarity=0.151 Sum_probs=121.6
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCc-ee---cccccccCCCCC-CCHHHHHHHHHHHHHH-cC-CCceeEEeeC
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKK-KI---ARNHGDSPHTDV-FSYAHLAEDVKYFLET-ES-IAQADVLGHS 87 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~-~v---~~ghG~S~~~~~-~s~~~~a~dl~~~l~~-l~-~~~~~lvGhS 87 (256)
..+.++++||...+...-..+...|+.+.++ ++ ++|+|.|...+. .+.-+-++.+.+.+++ .| .++++|.|+|
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 3478999999987776444455555553332 23 899999977543 3222222333333333 33 5789999999
Q ss_pred hhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCcee
Q psy1055 88 MGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQII 167 (256)
Q Consensus 88 ~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (256)
+|...+..+|.++| +.++||.. |.. ..+.. +..... ..
T Consensus 139 iGt~~tv~Lasr~~--~~alVL~S--Pf~---------S~~rv------------------------~~~~~~-----~~ 176 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP--LAAVVLHS--PFT---------SGMRV------------------------AFPDTK-----TT 176 (258)
T ss_pred CCchhhhhHhhcCC--cceEEEec--cch---------hhhhh------------------------hccCcc-----eE
Confidence 99999999999999 99999964 321 00000 000000 00
Q ss_pred eeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCC-eEEEecCCCccccccCchHHHH
Q psy1055 168 WQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA-EITYIEDAGHWVHSQKPDLFVD 246 (256)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~GH~~~~e~p~~~~~ 246 (256)
+.++ . |. .+. +...++||+||++|++|++++......+-+..++. +-.++.++||.- +|...++.+
T Consensus 177 ~~~d--~----f~-~i~-----kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~-~~~~~~yi~ 243 (258)
T KOG1552|consen 177 YCFD--A----FP-NIE-----KISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHND-IELYPEYIE 243 (258)
T ss_pred Eeec--c----cc-ccC-----cceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcc-cccCHHHHH
Confidence 1111 0 00 111 12278999999999999999999999999888765 788999999975 556667788
Q ss_pred HHHHHHhh
Q psy1055 247 KVVDFYRS 254 (256)
Q Consensus 247 ~i~~fl~~ 254 (256)
.+..|+..
T Consensus 244 ~l~~f~~~ 251 (258)
T KOG1552|consen 244 HLRRFISS 251 (258)
T ss_pred HHHHHHHH
Confidence 88888764
No 77
>KOG4391|consensus
Probab=99.52 E-value=5.1e-14 Score=107.70 Aligned_cols=198 Identities=17% Similarity=0.244 Sum_probs=128.0
Q ss_pred CCCCCCCEEEEcCCccchhcHHHHHHHHHhhcCc-e--e-cccccccCCCCC-CCHHHHHHH-HHHHHHHcC--CCceeE
Q psy1055 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKK-K--I-ARNHGDSPHTDV-FSYAHLAED-VKYFLETES--IAQADV 83 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~-~--v-~~ghG~S~~~~~-~s~~~~a~d-l~~~l~~l~--~~~~~l 83 (256)
.+.+.|+++.+||..||....-+.+..+..+... + + +||+|.|...+. --+..-++. |..++..-. -.|++|
T Consensus 74 ~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivl 153 (300)
T KOG4391|consen 74 SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVL 153 (300)
T ss_pred ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEE
Confidence 3457889999999999999998988887765432 2 2 899999976432 111111222 223333333 357999
Q ss_pred EeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCC
Q psy1055 84 LGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKG 163 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
.|-|+||++|..+|++..+++.++|+.++-. ..+ .. +....+ + +. .+.+.....+
T Consensus 154 fGrSlGGAvai~lask~~~ri~~~ivENTF~-SIp-------~~---~i~~v~-p---~~----~k~i~~lc~k------ 208 (300)
T KOG4391|consen 154 FGRSLGGAVAIHLASKNSDRISAIIVENTFL-SIP-------HM---AIPLVF-P---FP----MKYIPLLCYK------ 208 (300)
T ss_pred EecccCCeeEEEeeccchhheeeeeeechhc-cch-------hh---hhheec-c---ch----hhHHHHHHHH------
Confidence 9999999999999999999999999876411 111 00 000000 0 00 0000000000
Q ss_pred CceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCC--CeEEEecCCCccccccCc
Q psy1055 164 KQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPR--AEITYIEDAGHWVHSQKP 241 (256)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~GH~~~~e~p 241 (256)
..|.. . +.+. .-+.|.|+|.|.+|.++||..++.+-+..|. .++..+|+|.|.=-+- -
T Consensus 209 --n~~~S--------~-~ki~--------~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~ 268 (300)
T KOG4391|consen 209 --NKWLS--------Y-RKIG--------QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-C 268 (300)
T ss_pred --hhhcc--------h-hhhc--------cccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-e
Confidence 00000 0 0111 3467999999999999999999999988874 5789999999987554 4
Q ss_pred hHHHHHHHHHHhh
Q psy1055 242 DLFVDKVVDFYRS 254 (256)
Q Consensus 242 ~~~~~~i~~fl~~ 254 (256)
+-..++|.+||.+
T Consensus 269 dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 269 DGYFQAIEDFLAE 281 (300)
T ss_pred ccHHHHHHHHHHH
Confidence 6678999999976
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.52 E-value=2.4e-13 Score=109.10 Aligned_cols=213 Identities=15% Similarity=0.182 Sum_probs=124.1
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhh-cCce-e-cccccccCCCCCCCHHHHHHHHHHHHHHcCCC-ceeEEeeChhHHH
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRK-TKKK-I-ARNHGDSPHTDVFSYAHLAEDVKYFLETESIA-QADVLGHSMGGRA 92 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~-~~~~-v-~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~i 92 (256)
+||+|+|+.+++...|.++++.|.+. .... + .+|++ .+.....+++++|++..+-|...+-+ +++|+|||+||.+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~l 79 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGIL 79 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHH
Confidence 48999999999999999999999985 3222 2 67776 22233468999999999988887655 9999999999999
Q ss_pred HHHHHHh---CCCCcccEEEEeCCCCCCCCchhh----HHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCc
Q psy1055 93 MMYLALA---NPHLVSSLIVVDISPVGVSPTLRH----MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQ 165 (256)
Q Consensus 93 a~~~A~~---~P~~v~~lil~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (256)
|+++|.+ .-..|..|+++|+.+......... .....+.+......+. . .......+...+
T Consensus 80 A~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~---------- 146 (229)
T PF00975_consen 80 AFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPD-A--SLEDEELLARLL---------- 146 (229)
T ss_dssp HHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHH-H--HCHHHHHHHHHH----------
T ss_pred HHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCch-h--hhcCHHHHHHHH----------
Confidence 9999863 345699999999654322111100 0111112211110000 0 000000000000
Q ss_pred eeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCC---hhHHhhcCCC-CeEEEecCCCcccccc-C
Q psy1055 166 IIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQED---HPGIKSLFPR-AEITYIEDAGHWVHSQ-K 240 (256)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~---~~~~~~~~~~-~~~~~i~~~GH~~~~e-~ 240 (256)
..+..... .+..........-.+|.++....+|+...... ...+.+..++ .+++.++ ++|+.++. +
T Consensus 147 -------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~ 217 (229)
T PF00975_consen 147 -------RALRDDFQ-ALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKPH 217 (229)
T ss_dssp -------HHHHHHHH-HHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHSTT
T ss_pred -------HHHHHHHH-HHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecchH
Confidence 00000000 11111100000114678888888877655431 2235666554 5788997 59999997 7
Q ss_pred chHHHHHHHHHH
Q psy1055 241 PDLFVDKVVDFY 252 (256)
Q Consensus 241 p~~~~~~i~~fl 252 (256)
.+++.+.|.++|
T Consensus 218 ~~~i~~~I~~~~ 229 (229)
T PF00975_consen 218 VAEIAEKIAEWL 229 (229)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhccC
Confidence 788888888765
No 79
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.51 E-value=5.3e-14 Score=115.90 Aligned_cols=102 Identities=21% Similarity=0.293 Sum_probs=73.0
Q ss_pred CCCCCCCEEEEcCCccch-hcHHH-HHHHHH-hhcCcee---cccccccCCC-CCCCHHHHHHHHHHHHHHc------CC
Q psy1055 12 VDPDTKPIIIMHGLLGSK-NNWNS-LAKAIH-RKTKKKI---ARNHGDSPHT-DVFSYAHLAEDVKYFLETE------SI 78 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~-~~w~~-~~~~l~-~~~~~~v---~~ghG~S~~~-~~~s~~~~a~dl~~~l~~l------~~ 78 (256)
.++++|++|+|||++++. ..|.. +++.+. +...+++ +++++.+... ...+...+++++..+++.+ +.
T Consensus 32 f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 32 FNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 556788999999999987 67865 455444 3323444 6666332211 1134555666666666654 45
Q ss_pred CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCC
Q psy1055 79 AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDIS 113 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~ 113 (256)
++++||||||||.+|..+|.++|++|++++++|++
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 78999999999999999999999999999999954
No 80
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.49 E-value=2e-12 Score=127.61 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=83.9
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCCCCCCCHHHHHHHHHHHHHHcCC-CceeEEeeChhH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETESI-AQADVLGHSMGG 90 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg 90 (256)
++++|++|+||++++...|..+++.|.+.+.++. .+|||.+ ....++++++++++.+.++++.. .+++++||||||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~-~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGP-MQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhh
Confidence 3468999999999999999999999987643332 7899865 33457999999999999998764 489999999999
Q ss_pred HHHHHHHHh---CCCCcccEEEEeCCC
Q psy1055 91 RAMMYLALA---NPHLVSSLIVVDISP 114 (256)
Q Consensus 91 ~ia~~~A~~---~P~~v~~lil~~~~~ 114 (256)
.+|..+|.+ .|+.+..++++++.+
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999985 688999999998644
No 81
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.47 E-value=1.1e-12 Score=104.30 Aligned_cols=188 Identities=13% Similarity=0.159 Sum_probs=104.0
Q ss_pred HHHHHHHHHhhcCcee---cccccccCC------CCC---CCHHHHHHHHHHHHHHcCC--CceeEEeeChhHHHHHHHH
Q psy1055 32 WNSLAKAIHRKTKKKI---ARNHGDSPH------TDV---FSYAHLAEDVKYFLETESI--AQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 32 w~~~~~~l~~~~~~~v---~~ghG~S~~------~~~---~s~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~A 97 (256)
|+.....|++.++.++ .||.+.... ... ..++|..+-+..++++-.+ +++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 5566778888776665 676553211 111 1233444333444444333 5799999999999999999
Q ss_pred HhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCceeeeeChHHHHH
Q psy1055 98 LANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQT 177 (256)
Q Consensus 98 ~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (256)
.++|+++++++...+.. ........ .. . .. ...+...-. +. .+......
T Consensus 83 ~~~~~~f~a~v~~~g~~-d~~~~~~~-------------~~---~----~~---~~~~~~~~~--~~-----~~~~~~~~ 131 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVS-DLFSYYGT-------------TD---I----YT---KAEYLEYGD--PW-----DNPEFYRE 131 (213)
T ss_dssp HHTCCGSSEEEEESE-S-STTCSBHH-------------TC---C----HH---HGHHHHHSS--TT-----TSHHHHHH
T ss_pred cccceeeeeeeccceec-chhccccc-------------cc---c----cc---cccccccCc--cc-----hhhhhhhh
Confidence 99999999998865311 11100000 00 0 00 000110000 00 00111100
Q ss_pred hhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhc----CCCCeEEEecCCCcccc-ccCchHHHHHHHHHH
Q psy1055 178 QFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSL----FPRAEITYIEDAGHWVH-SQKPDLFVDKVVDFY 252 (256)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~----~~~~~~~~i~~~GH~~~-~e~p~~~~~~i~~fl 252 (256)
.. .+.... ...+++|+||++|++|..++.+.+..+.+. -..+++.++|++||... -+...+..+.+.+|+
T Consensus 132 -~s-~~~~~~---~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~ 206 (213)
T PF00326_consen 132 -LS-PISPAD---NVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFF 206 (213)
T ss_dssp -HH-HGGGGG---GCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHH
T ss_pred -hc-cccccc---cccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHH
Confidence 00 000000 001678999999999999998766655433 34589999999999654 455678899999999
Q ss_pred hhc
Q psy1055 253 RSL 255 (256)
Q Consensus 253 ~~~ 255 (256)
++.
T Consensus 207 ~~~ 209 (213)
T PF00326_consen 207 DKY 209 (213)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.46 E-value=2.9e-12 Score=101.84 Aligned_cols=100 Identities=15% Similarity=0.082 Sum_probs=64.4
Q ss_pred CCCCCEEEEcCCccchhcHH---HHHHHHHhhcCcee---cccccccCCC-----C------CCCHHHHHHHHHHHHHHc
Q psy1055 14 PDTKPIIIMHGLLGSKNNWN---SLAKAIHRKTKKKI---ARNHGDSPHT-----D------VFSYAHLAEDVKYFLETE 76 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~---~~~~~l~~~~~~~v---~~ghG~S~~~-----~------~~s~~~~a~dl~~~l~~l 76 (256)
+..|.||++||.+++...|. .+...+.+.+..++ .+|++.+... . .....++.+-+..+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 34677999999998877665 24444444444444 6677643211 0 001222222233333344
Q ss_pred CC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCC
Q psy1055 77 SI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDIS 113 (256)
Q Consensus 77 ~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~ 113 (256)
++ ++++|+|||+||.+++.+|.++|+.+.+++.+...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 44 47999999999999999999999999999887543
No 83
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.44 E-value=1.9e-12 Score=118.21 Aligned_cols=200 Identities=15% Similarity=0.168 Sum_probs=119.4
Q ss_pred CCEEEEcCCccchhc--HHHHHHHHHhhcCcee---ccc---cccc--C----CCCCCCHHHHHHHHHHHHHHcCC-C--
Q psy1055 17 KPIIIMHGLLGSKNN--WNSLAKAIHRKTKKKI---ARN---HGDS--P----HTDVFSYAHLAEDVKYFLETESI-A-- 79 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~--w~~~~~~l~~~~~~~v---~~g---hG~S--~----~~~~~s~~~~a~dl~~~l~~l~~-~-- 79 (256)
|.||++||.+..... |......|+..++.++ .|| +|+. . ......++++.+.+. ++++.++ +
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 678899999865444 5667788888877666 443 3322 1 112235677776666 5555543 4
Q ss_pred ceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhc
Q psy1055 80 QADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAV 159 (256)
Q Consensus 80 ~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
++.+.|||.||++++..+.+.| .+++.+... +.+. . +..+ .. .....+ ..+....
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~-~~~~---~---~~~~-------~~------~~~~~~----~~~~~~~ 528 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVA-GGVD---W---LLYF-------GE------STEGLR----FDPEENG 528 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEecc-Ccch---h---hhhc-------cc------cchhhc----CCHHHhC
Confidence 7999999999999999999999 666666432 1110 0 0000 00 000000 0001111
Q ss_pred cCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhc----CCCCeEEEecCCCcc
Q psy1055 160 DLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSL----FPRAEITYIEDAGHW 235 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~----~~~~~~~~i~~~GH~ 235 (256)
... +. +.+.... .-|.....++++|+|+|||++|..++.+.+..+.+. -..++++++|+.||.
T Consensus 529 ~~~-----~~-~~~~~~~-------~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 529 GGP-----PE-DREKYED-------RSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCc-----cc-ChHHHHh-------cChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 000 00 1111100 001111227899999999999999998776655443 345789999999999
Q ss_pred ccc-cCchHHHHHHHHHHhhc
Q psy1055 236 VHS-QKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 236 ~~~-e~p~~~~~~i~~fl~~~ 255 (256)
+.- ++-..+.+.+.+|+++.
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 596 FSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred CCCchhHHHHHHHHHHHHHHH
Confidence 977 45667788888888764
No 84
>KOG1838|consensus
Probab=99.44 E-value=2.2e-11 Score=102.89 Aligned_cols=232 Identities=18% Similarity=0.247 Sum_probs=118.9
Q ss_pred CCCCCCEEEEcCCccchhc--HHHHHHHHHhhcCcee---cccccccCCCCC--CC---HHHHHHHHHHHHHHcCCCcee
Q psy1055 13 DPDTKPIIIMHGLLGSKNN--WNSLAKAIHRKTKKKI---ARNHGDSPHTDV--FS---YAHLAEDVKYFLETESIAQAD 82 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~--w~~~~~~l~~~~~~~v---~~ghG~S~~~~~--~s---~~~~a~dl~~~l~~l~~~~~~ 82 (256)
+++.|.||+|||+.+++.. -+.++..+.++++++| .||+|+|.-+.+ |+ -+|+..-+..+-+..-..+..
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceE
Confidence 3456889999999875543 3566667777776665 799998865432 32 234444444444444557899
Q ss_pred EEeeChhHHHHHHHHHhC---CCCcccEEEEeCCCCCC---CCch--hhHHHHHHHHHhcCcccccCCChHHHHHHHH-H
Q psy1055 83 VLGHSMGGRAMMYLALAN---PHLVSSLIVVDISPVGV---SPTL--RHMSGLFDAMKSVNLDELSGQPLHAVRKIVD-K 153 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~---P~~v~~lil~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 153 (256)
.||.||||++...|-.+. ...+.++++.+ |... .... ...+.....+...++.... ...+..+. .
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~--Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~----~~~r~~~~~~ 275 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCN--PWDLLAASRSIETPLYRRFYNRALTLNLKRIV----LRHRHTLFED 275 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEec--cchhhhhhhHHhcccchHHHHHHHHHhHHHHH----hhhhhhhhhc
Confidence 999999999999876643 33455555543 3311 0000 0011111111110000000 00000000 0
Q ss_pred HH--HhhccCCC-Cce-----eeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChh-HHhhcCCCC
Q psy1055 154 AL--ATAVDLKG-KQI-----IWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHP-GIKSLFPRA 224 (256)
Q Consensus 154 ~~--~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~ 224 (256)
.. ....+... .++ ...+..+.....++ .-... ....+|++|+|.|...+|+++|++... ...+..|++
T Consensus 276 ~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~-~aSs~--~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v 352 (409)
T KOG1838|consen 276 PVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYK-KASSS--NYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNV 352 (409)
T ss_pred cchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHh-hcchh--hhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcE
Confidence 00 00000000 000 00001111222221 11111 122389999999999999999986544 344556888
Q ss_pred eEEEecCCCccccccC----chHHHHH-HHHHHh
Q psy1055 225 EITYIEDAGHWVHSQK----PDLFVDK-VVDFYR 253 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~----p~~~~~~-i~~fl~ 253 (256)
-+.+-..+||.-++|. +....+. +.+|+.
T Consensus 353 ~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 353 LLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred EEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 8888899999999997 2222333 666654
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.42 E-value=2e-12 Score=103.05 Aligned_cols=175 Identities=19% Similarity=0.198 Sum_probs=100.6
Q ss_pred CCCCCCCCEEEEcCCccchhcHHHHHHHHHhh-cCcee-ccc--------ccc---cC-----CCCC-----CCHHHHHH
Q psy1055 11 PVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRK-TKKKI-ARN--------HGD---SP-----HTDV-----FSYAHLAE 67 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~-~~~~v-~~g--------hG~---S~-----~~~~-----~s~~~~a~ 67 (256)
|.++..+.|||+||.+++...|.......... ...+| .++ .|. +- .... ..+...++
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 45666778999999999997777665522111 11222 111 232 11 0110 12344555
Q ss_pred HHHHHHHHc---CC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCC
Q psy1055 68 DVKYFLETE---SI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQ 142 (256)
Q Consensus 68 dl~~~l~~l---~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
.|.++++.+ ++ ++++|.|.|.||++|+.+++++|+.+.++|.+..... . . .
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~--~-~-----------------~---- 144 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLP--P-E-----------------S---- 144 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---T--T-G-----------------C----
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccc--c-c-----------------c----
Confidence 566666543 33 5799999999999999999999999999998752110 0 0 0
Q ss_pred ChHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHH----h
Q psy1055 143 PLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGI----K 218 (256)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~----~ 218 (256)
. ... .... .-++|+++++|++|+++|.+.++.. +
T Consensus 145 ~-----------~~~------------------------~~~~-------~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~ 182 (216)
T PF02230_consen 145 E-----------LED------------------------RPEA-------LAKTPILIIHGDEDPVVPFEWAEKTAEFLK 182 (216)
T ss_dssp C-----------CHC------------------------CHCC-------CCTS-EEEEEETT-SSSTHHHHHHHHHHHH
T ss_pred c-----------ccc------------------------cccc-------cCCCcEEEEecCCCCcccHHHHHHHHHHHH
Confidence 0 000 0000 1156999999999999997665544 3
Q ss_pred hcCCCCeEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 219 SLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 219 ~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
+...+++++.+++.||.+. .+..+.+.+||++.
T Consensus 183 ~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 183 AAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp CTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 3344678999999999885 45567788888763
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.41 E-value=3.1e-11 Score=101.75 Aligned_cols=211 Identities=11% Similarity=0.064 Sum_probs=112.3
Q ss_pred CCCCCEEEEcCCc---cchhcHHHHHHHHHhhcC-ceecccccccCCCC-CCCHHH---HHHHHHHHHHHcCC--CceeE
Q psy1055 14 PDTKPIIIMHGLL---GSKNNWNSLAKAIHRKTK-KKIARNHGDSPHTD-VFSYAH---LAEDVKYFLETESI--AQADV 83 (256)
Q Consensus 14 ~~~~~iv~lHG~~---~~~~~w~~~~~~l~~~~~-~~v~~ghG~S~~~~-~~s~~~---~a~dl~~~l~~l~~--~~~~l 83 (256)
...|.||++||++ ++...|..++..|++... .++...+-.++..+ ...+++ ..+.+.+..+++++ ++++|
T Consensus 79 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 79 DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 3456799999976 677789999999987533 33422232333211 112333 33444444556666 47999
Q ss_pred EeeChhHHHHHHHHHhC------CCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHh
Q psy1055 84 LGHSMGGRAMMYLALAN------PHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALAT 157 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~------P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
+|+|+||.+|+.+|.+. |.++++++++.+.. ... . . .. ..... ......+.... ......
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~-~~~-~--~-~s-~~~~~----~~~~~l~~~~~----~~~~~~ 224 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY-GLR-D--S-VS-RRLLG----GVWDGLTQQDL----QMYEEA 224 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc-CCC-C--C-hh-HHHhC----CCccccCHHHH----HHHHHH
Confidence 99999999999988753 46788988874211 111 1 0 00 01110 00001111111 111112
Q ss_pred hccCCCCceeeeeChHHHHHhhhhhc-cCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHh----hcCCCCeEEEecCC
Q psy1055 158 AVDLKGKQIIWQCNLDSLQTQFFNHM-INFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIK----SLFPRAEITYIEDA 232 (256)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~----~~~~~~~~~~i~~~ 232 (256)
++............ . ... .+ ..+ -|++|++|+.|.+.+ ....++ +.--.++++++++.
T Consensus 225 y~~~~~~~~~p~~~-p-~~~----~l~~~l---------Pp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~ 287 (318)
T PRK10162 225 YLSNDADRESPYYC-L-FNN----DLTRDV---------PPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGT 287 (318)
T ss_pred hCCCccccCCcccC-c-chh----hhhcCC---------CCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCC
Confidence 22111000000000 0 000 11 112 399999999998765 333433 33234789999999
Q ss_pred Cccccc-----cCchHHHHHHHHHHhhc
Q psy1055 233 GHWVHS-----QKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 233 GH~~~~-----e~p~~~~~~i~~fl~~~ 255 (256)
.|.... +...+..+.+.+||++.
T Consensus 288 ~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 288 LHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred ceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 997632 33456777788888753
No 87
>COG0400 Predicted esterase [General function prediction only]
Probab=99.38 E-value=7.6e-12 Score=97.90 Aligned_cols=170 Identities=21% Similarity=0.307 Sum_probs=113.3
Q ss_pred CCCCCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee-cccc----cccC----C-CCCC-------CHHHHHHHHHHH
Q psy1055 10 TPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI-ARNH----GDSP----H-TDVF-------SYAHLAEDVKYF 72 (256)
Q Consensus 10 ~~~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v-~~gh----G~S~----~-~~~~-------s~~~~a~dl~~~ 72 (256)
.+.++..+.||++||+|++...+-+....+..+. .++ .||- |.-. . ...+ ..+.+++-|.+.
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~-~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELILPNA-TLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcCCCC-eEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 4566667779999999999877777555544442 233 4442 1110 0 0112 235566777777
Q ss_pred HHHcCC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHH
Q psy1055 73 LETESI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKI 150 (256)
Q Consensus 73 l~~l~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
.++.++ ++++++|+|-||++++.+..++|+.++++|+..+... . + ..
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~--~-------------------~-----~~----- 139 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLP--L-------------------E-----PE----- 139 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCC--C-------------------C-----Cc-----
Confidence 777788 7899999999999999999999999999998642110 0 0 00
Q ss_pred HHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC----CCCeE
Q psy1055 151 VDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF----PRAEI 226 (256)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~ 226 (256)
. .+ . ....|+++++|+.|+++|...+..+++.+ -+++.
T Consensus 140 --------~--~~------------------~----------~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~ 181 (207)
T COG0400 140 --------L--LP------------------D----------LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEV 181 (207)
T ss_pred --------c--cc------------------c----------cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEE
Confidence 0 00 0 12469999999999999987766665543 35677
Q ss_pred EEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 227 TYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 227 ~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
+.++ .||.+..|. .+.+++|+.+
T Consensus 182 ~~~~-~GH~i~~e~----~~~~~~wl~~ 204 (207)
T COG0400 182 RWHE-GGHEIPPEE----LEAARSWLAN 204 (207)
T ss_pred EEec-CCCcCCHHH----HHHHHHHHHh
Confidence 8888 899986554 4455556654
No 88
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.34 E-value=1.1e-11 Score=94.69 Aligned_cols=157 Identities=13% Similarity=0.254 Sum_probs=99.0
Q ss_pred EEEEcCCccc-hhcHHHHH-HHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHH
Q psy1055 19 IIIMHGLLGS-KNNWNSLA-KAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYL 96 (256)
Q Consensus 19 iv~lHG~~~~-~~~w~~~~-~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 96 (256)
|+.+||++++ ...|.+.. ..|... .++-++.. ...+++.|.+.+.+-+.... ++++|||||+|+..++.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTALRW 72 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHH
Confidence 6889999886 55698754 456554 23324322 22467888888888777654 468999999999999999
Q ss_pred H-HhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCceeeeeChHHH
Q psy1055 97 A-LANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSL 175 (256)
Q Consensus 97 A-~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (256)
+ ...+.+|++++|+. |.... .. ......+.
T Consensus 73 l~~~~~~~v~g~lLVA--p~~~~-~~-------------------------------~~~~~~~~--------------- 103 (171)
T PF06821_consen 73 LAEQSQKKVAGALLVA--PFDPD-DP-------------------------------EPFPPELD--------------- 103 (171)
T ss_dssp HHHTCCSSEEEEEEES----SCG-CH-------------------------------HCCTCGGC---------------
T ss_pred HhhcccccccEEEEEc--CCCcc-cc-------------------------------cchhhhcc---------------
Confidence 8 78899999999985 21110 00 00000000
Q ss_pred HHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCch
Q psy1055 176 QTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPD 242 (256)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~ 242 (256)
.+.. .....+.+|.++|.+++|++++.+.++.+++.. +++++.++++||+--.+-=.
T Consensus 104 ------~f~~---~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G~~ 160 (171)
T PF06821_consen 104 ------GFTP---LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAASGFG 160 (171)
T ss_dssp ------CCTT---SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGTHS
T ss_pred ------cccc---CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccccCCC
Confidence 0000 000123457799999999999999998998876 89999999999998765433
No 89
>KOG2565|consensus
Probab=99.31 E-value=5.9e-11 Score=97.84 Aligned_cols=95 Identities=20% Similarity=0.189 Sum_probs=82.4
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhc---------Ccee---cccccccCCC--CCCCHHHHHHHHHHHHHHcCCCce
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKT---------KKKI---ARNHGDSPHT--DVFSYAHLAEDVKYFLETESIAQA 81 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~---------~~~v---~~ghG~S~~~--~~~s~~~~a~dl~~~l~~l~~~~~ 81 (256)
-.|++++|||+|+-..|-.+++.|.+.. +.+| +||+|=|+.+ ..++....|.-+..++=.+|..++
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkf 231 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKF 231 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCccee
Confidence 3599999999999999999999998641 1233 8999988764 347888999999999999999999
Q ss_pred eEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 82 DVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
.|=|-.||+.|+..+|..+|++|.++=+-
T Consensus 232 fiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 232 FIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred EeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 99999999999999999999999998753
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.31 E-value=3.8e-11 Score=95.81 Aligned_cols=173 Identities=16% Similarity=0.246 Sum_probs=105.1
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee----cccccccCCC--CC---C------CHHHHHHHHHHHHHHc--
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPHT--DV---F------SYAHLAEDVKYFLETE-- 76 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~~--~~---~------s~~~~a~dl~~~l~~l-- 76 (256)
+..|.||++|++.|-...-+.+++.|++.++.++ +.|.+..... .. . ..+...+++.+.++.+
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 3567899999998866666789999999886665 3344411111 10 0 1235567775555555
Q ss_pred -C---CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHH
Q psy1055 77 -S---IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVD 152 (256)
Q Consensus 77 -~---~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (256)
. .+++.++|.||||.+++.+|.+. +.+++.+..= | .. . .
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~y--g---~~----------------~-~-------------- 134 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFY--G---GS----------------P-P-------------- 134 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES------SS----------------S-G--------------
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEc--C---CC----------------C-C--------------
Confidence 2 24799999999999999999887 5688887631 1 00 0 0
Q ss_pred HHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhh----cCCCCeEEE
Q psy1055 153 KALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKS----LFPRAEITY 228 (256)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~----~~~~~~~~~ 228 (256)
..... ... ++++|+++++|++|+.++.+..+.+.+ .-...++++
T Consensus 135 -------------------~~~~~-~~~------------~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 182 (218)
T PF01738_consen 135 -------------------PPPLE-DAP------------KIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHV 182 (218)
T ss_dssp -------------------GGHHH-HGG------------G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEE
T ss_pred -------------------Ccchh-hhc------------ccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEE
Confidence 00000 000 457899999999999999875444433 346789999
Q ss_pred ecCCCccccccCch--------HHHHHHHHHHhhc
Q psy1055 229 IEDAGHWVHSQKPD--------LFVDKVVDFYRSL 255 (256)
Q Consensus 229 i~~~GH~~~~e~p~--------~~~~~i~~fl~~~ 255 (256)
+|+++|.......+ +-.+.+.+||++.
T Consensus 183 y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 183 YPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp ETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999998766433 3446777888765
No 91
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=1.5e-11 Score=112.68 Aligned_cols=85 Identities=20% Similarity=0.172 Sum_probs=70.5
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCC------------C------------CCCHHHHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHT------------D------------VFSYAHLAED 68 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~------------~------------~~s~~~~a~d 68 (256)
.|+|||+||++++...|..+++.|.+++++++ +||||+|... . ..++...+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 46899999999999999999999997666665 8999998332 0 1267899999
Q ss_pred HHHHHHHcC----------------CCceeEEeeChhHHHHHHHHHhC
Q psy1055 69 VKYFLETES----------------IAQADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 69 l~~~l~~l~----------------~~~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
+..+...++ ..+++++||||||+++..++...
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 999988887 34899999999999999998753
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.28 E-value=7.5e-10 Score=85.58 Aligned_cols=180 Identities=11% Similarity=0.151 Sum_probs=105.9
Q ss_pred EEEEcCCccchhcHHH--HHHHHHhhcCce--ecccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHH
Q psy1055 19 IIIMHGLLGSKNNWNS--LAKAIHRKTKKK--IARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMM 94 (256)
Q Consensus 19 iv~lHG~~~~~~~w~~--~~~~l~~~~~~~--v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 94 (256)
|+.||||.++..+... +...+++.+..+ +.+. .....+...+.+.+++++..-+.+.|||+||||+.|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~-------l~~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~ 74 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPD-------LPPFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYAT 74 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCC-------CCcCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHH
Confidence 7899999998887653 344455542111 1111 1235677778899999998877899999999999999
Q ss_pred HHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhcc-CCCCceeeeeChH
Q psy1055 95 YLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVD-LKGKQIIWQCNLD 173 (256)
Q Consensus 95 ~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 173 (256)
.+|.+++ +++ ||++++- .+ . ..+..+ + ..... .....+.+. ..
T Consensus 75 ~La~~~~--~~a-vLiNPav--~p-~-~~l~~~---i------------------------G~~~~~~~~e~~~~~--~~ 118 (187)
T PF05728_consen 75 YLAERYG--LPA-VLINPAV--RP-Y-ELLQDY---I------------------------GEQTNPYTGESYELT--EE 118 (187)
T ss_pred HHHHHhC--CCE-EEEcCCC--CH-H-HHHHHh---h------------------------CccccCCCCccceec--hH
Confidence 9999986 555 6766321 11 0 011111 1 00000 000001110 00
Q ss_pred HHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHH
Q psy1055 174 SLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFY 252 (256)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl 252 (256)
-+. ....+. .....-..+++++.++.|.+++. +...+...++...+.++++|-.- .=++....|.+|+
T Consensus 119 ~~~-----~l~~l~-~~~~~~~~~~lvll~~~DEvLd~---~~a~~~~~~~~~~i~~ggdH~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 119 HIE-----ELKALE-VPYPTNPERYLVLLQTGDEVLDY---REAVAKYRGCAQIIEEGGDHSFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred hhh-----hcceEe-ccccCCCccEEEEEecCCcccCH---HHHHHHhcCceEEEEeCCCCCCc--cHHHHHHHHHHhh
Confidence 000 000000 00013356999999999998875 45555567777778888888753 4667777888886
No 93
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.25 E-value=1.1e-10 Score=94.38 Aligned_cols=198 Identities=20% Similarity=0.311 Sum_probs=112.7
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHH-hhcC--ce----e-cccc----cc---cCCCC---------C-CCHHHHHH
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIH-RKTK--KK----I-ARNH----GD---SPHTD---------V-FSYAHLAE 67 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~-~~~~--~~----v-~~gh----G~---S~~~~---------~-~s~~~~a~ 67 (256)
..+..|.||+||++++...++.++..+. +.+. .+ | -.|+ |. ....+ . -++...++
T Consensus 8 ~~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp --S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred ccCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 3456799999999999999999999997 5432 11 1 2232 22 11111 1 24667777
Q ss_pred HHHHHHHHc----CCCceeEEeeChhHHHHHHHHHhCCC-----CcccEEEEeCCCC-CCCCchhhHHHHHHHHHhcCcc
Q psy1055 68 DVKYFLETE----SIAQADVLGHSMGGRAMMYLALANPH-----LVSSLIVVDISPV-GVSPTLRHMSGLFDAMKSVNLD 137 (256)
Q Consensus 68 dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~P~-----~v~~lil~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (256)
.+..++.+| +++++.+|||||||.+++.|...+-. .|.++|.|++ |+ +..... . .
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~-pfng~~~~~-~-------------~ 152 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAG-PFNGILGMN-D-------------D 152 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES---TTTTTCCS-C--------------
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecc-ccCcccccc-c-------------c
Confidence 777777666 78999999999999999999887532 5899999974 54 221110 0 0
Q ss_pred cccCCChHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhh-ccCCCCCCCCCCCCCeeEEecC------CCCCcc
Q psy1055 138 ELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNH-MINFPQPGEKTYGGPTLFIGGG------RSDFIR 210 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~lii~G~------~D~~~~ 210 (256)
. . . ..+...+ .....+...... .. ...+| -++.+|-|.|. .|..+|
T Consensus 153 ~----~-----------~-~~~~~~g----p~~~~~~y~~l~-~~~~~~~p------~~i~VLnI~G~~~~g~~sDG~V~ 205 (255)
T PF06028_consen 153 Q----N-----------Q-NDLNKNG----PKSMTPMYQDLL-KNRRKNFP------KNIQVLNIYGDLEDGSNSDGIVP 205 (255)
T ss_dssp T----T-----------T-T-CSTT-----BSS--HHHHHHH-HTHGGGST------TT-EEEEEEEESBTTCSBTSSSB
T ss_pred c----h-----------h-hhhcccC----CcccCHHHHHHH-HHHHhhCC------CCeEEEEEecccCCCCCCCeEEe
Confidence 0 0 0 0000000 000011111111 11 11222 25679999998 577888
Q ss_pred CCChhHHhhcCCC----CeEEEec--CCCccccccCchHHHHHHHHHHh
Q psy1055 211 QEDHPGIKSLFPR----AEITYIE--DAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 211 ~~~~~~~~~~~~~----~~~~~i~--~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
...+..++..+.+ -+-.++. ++.|.-.-|+| ++.+.|.+||-
T Consensus 206 ~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 206 NASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp HHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 7666666666643 2445554 47899888877 67899999983
No 94
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.23 E-value=8.1e-11 Score=94.04 Aligned_cols=99 Identities=26% Similarity=0.327 Sum_probs=63.2
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhc--------Cceecccccc--cCCCCC---CCHHHHHHHHHHHHHHc----
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKT--------KKKIARNHGD--SPHTDV---FSYAHLAEDVKYFLETE---- 76 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~--------~~~v~~ghG~--S~~~~~---~s~~~~a~dl~~~l~~l---- 76 (256)
-++.|||||||..++...|+.+...+.+.. ..+..-++.+ |..... ...+...+.+..+++..
T Consensus 2 ~~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 2 LSGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 368899999999999999988887773221 0111111111 111111 11233444555555555
Q ss_pred -CCCceeEEeeChhHHHHHHHHHhCC---CCcccEEEEeC
Q psy1055 77 -SIAQADVLGHSMGGRAMMYLALANP---HLVSSLIVVDI 112 (256)
Q Consensus 77 -~~~~~~lvGhS~Gg~ia~~~A~~~P---~~v~~lil~~~ 112 (256)
+.++++||||||||.+|..+....+ +.|+.+|.+++
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 5578999999999999988776543 57999999874
No 95
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.20 E-value=4.1e-09 Score=85.09 Aligned_cols=97 Identities=22% Similarity=0.201 Sum_probs=79.2
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCCCCHHHHHHHHHHHHHHcCC-CceeEEeeChhHHH
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETESI-AQADVLGHSMGGRA 92 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~-~~~~lvGhS~Gg~i 92 (256)
+|+.++|+.+|....|.+++..|... ..++ .+|.|.- ....-+++++++...+-|.+.+- .+++|+|||+||.+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~-~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~v 78 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAG-EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAV 78 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccc-ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHH
Confidence 68999999999999999999999976 3343 6777642 22335899999999998888853 58999999999999
Q ss_pred HHHHHHh---CCCCcccEEEEeCCCC
Q psy1055 93 MMYLALA---NPHLVSSLIVVDISPV 115 (256)
Q Consensus 93 a~~~A~~---~P~~v~~lil~~~~~~ 115 (256)
|+..|.+ .-+.|..|+++|+.+.
T Consensus 79 A~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 79 AFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999873 3468999999998665
No 96
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.16 E-value=5.9e-10 Score=91.40 Aligned_cols=95 Identities=21% Similarity=0.280 Sum_probs=75.8
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhc--Ccee----cccccccCCC-------CCCCHHHHHHHHHHHHHHcCC-----
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKT--KKKI----ARNHGDSPHT-------DVFSYAHLAEDVKYFLETESI----- 78 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~--~~~v----~~ghG~S~~~-------~~~s~~~~a~dl~~~l~~l~~----- 78 (256)
.-+|||+|.+|-..++.++++.|.+.. ..-| ..||-.++.. ..|++++..+.-.++++++-.
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 358899999999999999999998762 2222 6677654432 348899988888888877632
Q ss_pred -CceeEEeeChhHHHHHHHHHhCC---CCcccEEEEe
Q psy1055 79 -AQADVLGHSMGGRAMMYLALANP---HLVSSLIVVD 111 (256)
Q Consensus 79 -~~~~lvGhS~Gg~ia~~~A~~~P---~~v~~lil~~ 111 (256)
.+++|+|||.|++|++.+..++| .+|.+++++=
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLf 119 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLF 119 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeC
Confidence 46999999999999999999999 8899999874
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.15 E-value=7.2e-10 Score=94.36 Aligned_cols=210 Identities=16% Similarity=0.194 Sum_probs=112.5
Q ss_pred CCCCEEEEcCCccchh--cHHHHHHHHHhhcCcee---cccccccCCCC-CCCHHHHHHHHHHHHHHcC---CCceeEEe
Q psy1055 15 DTKPIIIMHGLLGSKN--NWNSLAKAIHRKTKKKI---ARNHGDSPHTD-VFSYAHLAEDVKYFLETES---IAQADVLG 85 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~--~w~~~~~~l~~~~~~~v---~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l~---~~~~~lvG 85 (256)
+..|+|++-|...+.. +|..+.+.|.+.+...+ .||-|.|.+.+ ..+.+.+-+.|...+.... -+++.++|
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G 267 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWG 267 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEE
Confidence 3447777777766543 35566677777765443 89999986532 1223445556666666653 35899999
Q ss_pred eChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCc
Q psy1055 86 HSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQ 165 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (256)
.|+||++|..+|..++++++++|..++ ++.. .+... ..... .+ ..+...+...+....
T Consensus 268 ~SfGGy~AvRlA~le~~RlkavV~~Ga-~vh~--~ft~~----~~~~~--~P-----------~my~d~LA~rlG~~~-- 325 (411)
T PF06500_consen 268 FSFGGYYAVRLAALEDPRLKAVVALGA-PVHH--FFTDP----EWQQR--VP-----------DMYLDVLASRLGMAA-- 325 (411)
T ss_dssp ETHHHHHHHHHHHHTTTT-SEEEEES----SC--GGH-H----HHHTT--S------------HHHHHHHHHHCT-SC--
T ss_pred eccchHHHHHHHHhcccceeeEeeeCc-hHhh--hhccH----HHHhc--CC-----------HHHHHHHHHHhCCcc--
Confidence 999999999999999999999999863 2211 11000 00000 00 011122222222111
Q ss_pred eeeeeChHHHHHhhhhhccCCCC--CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchH
Q psy1055 166 IIWQCNLDSLQTQFFNHMINFPQ--PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDL 243 (256)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~ 243 (256)
.+.+.+..... .+.-..+ +...+.++|+|.+.|++|+++|.+..+-++..-.+.+...|+... ++.-. ++
T Consensus 326 ----~~~~~l~~el~-~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~--~~~gy-~~ 397 (411)
T PF06500_consen 326 ----VSDESLRGELN-KFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP--LHMGY-PQ 397 (411)
T ss_dssp ----E-HHHHHHHGG-GGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS--HHHHH-HH
T ss_pred ----CCHHHHHHHHH-hcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc--cccch-HH
Confidence 11222222111 1111111 112377899999999999999998888888877778888887654 22222 35
Q ss_pred HHHHHHHHHhh
Q psy1055 244 FVDKVVDFYRS 254 (256)
Q Consensus 244 ~~~~i~~fl~~ 254 (256)
-...+.+||++
T Consensus 398 al~~~~~Wl~~ 408 (411)
T PF06500_consen 398 ALDEIYKWLED 408 (411)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 57777888875
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.13 E-value=3e-10 Score=92.91 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=58.0
Q ss_pred CCCEEEEcCCccch---hcHHHHHHHHHhhcCcee-------cccccccCCCCCCCHHHHHHHHHHHHHHc--------C
Q psy1055 16 TKPIIIMHGLLGSK---NNWNSLAKAIHRKTKKKI-------ARNHGDSPHTDVFSYAHLAEDVKYFLETE--------S 77 (256)
Q Consensus 16 ~~~iv~lHG~~~~~---~~w~~~~~~l~~~~~~~v-------~~ghG~S~~~~~~s~~~~a~dl~~~l~~l--------~ 77 (256)
...||||-|++.+. .+...+++.|.+..+.++ +.|+|-+ |+++-++||.++++.+ +
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~~v~ylr~~~~g~~~ 106 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQLVEYLRSEKGGHFG 106 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--------HHHHHHHHHHHHHHHHHHS-----
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc------hhhhHHHHHHHHHHHHHHhhccccC
Confidence 44699999998743 346778888876544444 4566644 6777777777777654 2
Q ss_pred CCceeEEeeChhHHHHHHHHHhC-----CCCcccEEEEe
Q psy1055 78 IAQADVLGHSMGGRAMMYLALAN-----PHLVSSLIVVD 111 (256)
Q Consensus 78 ~~~~~lvGhS~Gg~ia~~~A~~~-----P~~v~~lil~~ 111 (256)
-++++|+|||-|+--++.|.... ...|++.||-.
T Consensus 107 ~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQA 145 (303)
T PF08538_consen 107 REKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQA 145 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEE
T ss_pred CccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeC
Confidence 46899999999999999887754 27899999954
No 99
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.11 E-value=3.7e-09 Score=93.46 Aligned_cols=97 Identities=13% Similarity=0.191 Sum_probs=73.3
Q ss_pred CCCCCEEEEcCCccchhcH-----HHHHHHHHhhcCcee---cccccccCCCCCCCHHHHHHHHHHHHHHc----CCCce
Q psy1055 14 PDTKPIIIMHGLLGSKNNW-----NSLAKAIHRKTKKKI---ARNHGDSPHTDVFSYAHLAEDVKYFLETE----SIAQA 81 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w-----~~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~~a~dl~~~l~~l----~~~~~ 81 (256)
..++|||+++.+-.....| +.++..|.++++.+. .++-+.+. ...+++++++.|.+.++.. |.+++
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~--r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH--REWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred cCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh--cCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 3467999999998655556 578889888877653 45544442 3367777776666655554 67899
Q ss_pred eEEeeChhHHHHHH----HHHhCCC-CcccEEEEeC
Q psy1055 82 DVLGHSMGGRAMMY----LALANPH-LVSSLIVVDI 112 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~----~A~~~P~-~v~~lil~~~ 112 (256)
+++|+||||.+++. ||+++|+ +|++++++.+
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllat 326 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVS 326 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeec
Confidence 99999999999886 8899996 8999998853
No 100
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.10 E-value=1.2e-08 Score=87.51 Aligned_cols=235 Identities=14% Similarity=0.116 Sum_probs=132.2
Q ss_pred CCCEEEEcCCccchhcH-HHHHHHHHhhcCcee--cccccccCC-CCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHH
Q psy1055 16 TKPIIIMHGLLGSKNNW-NSLAKAIHRKTKKKI--ARNHGDSPH-TDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGR 91 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w-~~~~~~l~~~~~~~v--~~ghG~S~~-~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 91 (256)
.+|||++.-..+..... +.+++.|-+.+.+.+ ...-+..+. ...++++++++-|.++++++|-+ ++++|.|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999888665444 556666666322223 222232321 24478999999999999999866 99999999999
Q ss_pred HHHHHHHhC-----CCCcccEEEEeCCCCCCCC---chh------hHHHHHHHHHhc-----------Cccccc---CC-
Q psy1055 92 AMMYLALAN-----PHLVSSLIVVDISPVGVSP---TLR------HMSGLFDAMKSV-----------NLDELS---GQ- 142 (256)
Q Consensus 92 ia~~~A~~~-----P~~v~~lil~~~~~~~~~~---~~~------~~~~~~~~~~~~-----------~~~~~~---~~- 142 (256)
.++.+++.+ |+++++++++. +|..... ... .+..+.+.+... .++... .+
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~-~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~ 259 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMG-GPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFI 259 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEe-cCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHH
Confidence 877666544 77899999986 3542211 111 111111111000 011000 00
Q ss_pred --ChHHHHHHHHHHHHhhccCCCC---c----ee---------eeeChHHHHHhhhhhccCCCC---------CCCCCCC
Q psy1055 143 --PLHAVRKIVDKALATAVDLKGK---Q----II---------WQCNLDSLQTQFFNHMINFPQ---------PGEKTYG 195 (256)
Q Consensus 143 --~~~~~~~~~~~~~~~~~~~~~~---~----~~---------~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~ 195 (256)
..........+.+......+.. . +. -....+.+...|.+. .++. ....+|+
T Consensus 260 ~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n--~L~~G~l~v~G~~Vdl~~I~ 337 (406)
T TIGR01849 260 SMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQF--LLPQGKFIVEGKRVDPGAIT 337 (406)
T ss_pred HcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhC--CccCCcEEECCEEecHHHCc
Confidence 0000000111112122111100 0 00 001112222222111 1111 2335888
Q ss_pred -CCeeEEecCCCCCccCCChhHHhhcC---C--CCeEEEecCCCcccccc---CchHHHHHHHHHHhh
Q psy1055 196 -GPTLFIGGGRSDFIRQEDHPGIKSLF---P--RAEITYIEDAGHWVHSQ---KPDLFVDKVVDFYRS 254 (256)
Q Consensus 196 -~P~lii~G~~D~~~~~~~~~~~~~~~---~--~~~~~~i~~~GH~~~~e---~p~~~~~~i~~fl~~ 254 (256)
+|+|.|.|++|.++++.....+.+++ + ..+.++.+++||+-..- -++++...|.+||.+
T Consensus 338 ~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 338 RVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 99999999999999999888888874 4 23467777999998554 368889999999975
No 101
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.07 E-value=2.1e-10 Score=103.73 Aligned_cols=98 Identities=11% Similarity=0.026 Sum_probs=73.6
Q ss_pred CCCCCEEEEcCCccchh---cHH-HHHHHHHhhcCcee---cccccccCCCCC-CCHHHHHHHHHHHHHHcC-----CCc
Q psy1055 14 PDTKPIIIMHGLLGSKN---NWN-SLAKAIHRKTKKKI---ARNHGDSPHTDV-FSYAHLAEDVKYFLETES-----IAQ 80 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~---~w~-~~~~~l~~~~~~~v---~~ghG~S~~~~~-~s~~~~a~dl~~~l~~l~-----~~~ 80 (256)
+..|.||++||++.+.. .|. .....|.++++.++ +||||.|..... ++ ...++|+.++++.+. ..+
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~ 98 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGN 98 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccchHHHHHHHHHHhCCCCCCc
Confidence 34678999999997653 232 34567777766665 899999976432 22 556777777777652 258
Q ss_pred eeEEeeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 81 ADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
+.++|||+||.+++.+|..+|+.+++++...+
T Consensus 99 v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~ 130 (550)
T TIGR00976 99 VGMLGVSYLAVTQLLAAVLQPPALRAIAPQEG 130 (550)
T ss_pred EEEEEeChHHHHHHHHhccCCCceeEEeecCc
Confidence 99999999999999999999999999998653
No 102
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.06 E-value=1.9e-08 Score=80.98 Aligned_cols=169 Identities=17% Similarity=0.294 Sum_probs=117.8
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCcee----cccccccCCCC------------CCCHHHHHHHHHHHHHHcC---
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPHTD------------VFSYAHLAEDVKYFLETES--- 77 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~~~------------~~s~~~~a~dl~~~l~~l~--- 77 (256)
|.||++|+..+-....+.++++|++.++.++ +...|.+.... ..+......|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 6799999999988889999999999987665 23334332111 1123677778887777762
Q ss_pred ---CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHH
Q psy1055 78 ---IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKA 154 (256)
Q Consensus 78 ---~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.+++.++|.||||.+++.+|.+.| .|++.+..-.... .. . +..
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~--~~------------------~----~~~--------- 153 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI--AD------------------D----TAD--------- 153 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC--CC------------------c----ccc---------
Confidence 356999999999999999999998 6888775321110 00 0 000
Q ss_pred HHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC----CCCeEEEec
Q psy1055 155 LATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF----PRAEITYIE 230 (256)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~ 230 (256)
..++++|+|+..|+.|..++.+..+.+.+.+ ...++.+++
T Consensus 154 ------------------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ 197 (236)
T COG0412 154 ------------------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP 197 (236)
T ss_pred ------------------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC
Confidence 0056789999999999999987766665543 257789999
Q ss_pred CCCccccccC-----------chHHHHHHHHHHhhc
Q psy1055 231 DAGHWVHSQK-----------PDLFVDKVVDFYRSL 255 (256)
Q Consensus 231 ~~GH~~~~e~-----------p~~~~~~i~~fl~~~ 255 (256)
++.|..+.+. .+.-.+.+.+|+++.
T Consensus 198 ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 198 GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 9999988653 234456677777654
No 103
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.01 E-value=6.5e-08 Score=75.95 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=67.1
Q ss_pred EEcCCc--cchhcHHHHHHHHHhhcCcee--cccccccCCCCCCCHHHHHHHHHHHHH-HcCCCceeEEeeChhHHHHHH
Q psy1055 21 IMHGLL--GSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLE-TESIAQADVLGHSMGGRAMMY 95 (256)
Q Consensus 21 ~lHG~~--~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~-~l~~~~~~lvGhS~Gg~ia~~ 95 (256)
++|+.+ ++...|..+...|......+. .+|++.+.... .+++.+++.+...+. .....+++++|||+||.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP-ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC-CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHH
Confidence 445533 677789999999987543332 78887654332 467777777665554 345678999999999999998
Q ss_pred HHHh---CCCCcccEEEEeCCC
Q psy1055 96 LALA---NPHLVSSLIVVDISP 114 (256)
Q Consensus 96 ~A~~---~P~~v~~lil~~~~~ 114 (256)
+|.+ .++.+.++++++..+
T Consensus 81 ~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 81 VAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHhCCCCCcEEEEEccCC
Confidence 8875 567899999988544
No 104
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.00 E-value=2.4e-08 Score=83.86 Aligned_cols=206 Identities=17% Similarity=0.173 Sum_probs=104.4
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccc-cCC--------------------CCCCCHHHHHHHH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGD-SPH--------------------TDVFSYAHLAEDV 69 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~-S~~--------------------~~~~s~~~~a~dl 69 (256)
++-|.||..||.++....|...+. ++..+..++ .||.|. |.. ...+-+..+..|.
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred CCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 334568889999999888877655 444555444 788872 210 0001134555666
Q ss_pred HHHHHHc------CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCC
Q psy1055 70 KYFLETE------SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQP 143 (256)
Q Consensus 70 ~~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (256)
...++.+ +-+++.+.|.|+||.+++.+|+..| +|++++..- |.. ..+...+..-.. ..+
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v--P~l-----~d~~~~~~~~~~--~~~----- 224 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV--PFL-----CDFRRALELRAD--EGP----- 224 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES--ESS-----SSHHHHHHHT----STT-----
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC--CCc-----cchhhhhhcCCc--ccc-----
Confidence 6655544 2257899999999999999999987 499888753 211 122222221110 000
Q ss_pred hHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCC-CCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC
Q psy1055 144 LHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQ-PGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP 222 (256)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 222 (256)
.......++ ..+.... ..+.+.+ .+..+.. .-..+|++|+++-.|-.|..+||...-.+.+.++
T Consensus 225 y~~~~~~~~-----~~d~~~~------~~~~v~~----~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~ 289 (320)
T PF05448_consen 225 YPEIRRYFR-----WRDPHHE------REPEVFE----TLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP 289 (320)
T ss_dssp THHHHHHHH-----HHSCTHC------HHHHHHH----HHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--
T ss_pred HHHHHHHHh-----ccCCCcc------cHHHHHH----HHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC
Confidence 111111111 0000000 0001100 1111110 0112789999999999999999987666666665
Q ss_pred -CCeEEEecCCCccccccCchHH-HHHHHHHHhh
Q psy1055 223 -RAEITYIEDAGHWVHSQKPDLF-VDKVVDFYRS 254 (256)
Q Consensus 223 -~~~~~~i~~~GH~~~~e~p~~~-~~~i~~fl~~ 254 (256)
..++.++|..||.. +.++ .+...+||.+
T Consensus 290 ~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 290 GPKELVVYPEYGHEY----GPEFQEDKQLNFLKE 319 (320)
T ss_dssp SSEEEEEETT--SST----THHHHHHHHHHHHHH
T ss_pred CCeeEEeccCcCCCc----hhhHHHHHHHHHHhc
Confidence 46899999999965 3444 6667777765
No 105
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.99 E-value=2.2e-08 Score=83.30 Aligned_cols=223 Identities=16% Similarity=0.243 Sum_probs=122.1
Q ss_pred CCCCEEEEcCCccchhcHH--HH-HHHHHhhcCce-e--cccccccCCC-----CCCCHH----------HHHHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWN--SL-AKAIHRKTKKK-I--ARNHGDSPHT-----DVFSYA----------HLAEDVKYFL 73 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~--~~-~~~l~~~~~~~-v--~~ghG~S~~~-----~~~s~~----------~~a~dl~~~l 73 (256)
.+|.+|.|+|.+. +.+|+ .+ +..|.+.+.-. + .|-||.-.+. ...+.. .-+.-|..++
T Consensus 91 ~rp~~IhLagTGD-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGTGD-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCCCc-cchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 4566777888775 66774 33 56666554322 3 5667743211 011221 1234455667
Q ss_pred HHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCC--Cch----hhHHHHHHHHHhcCcccccCCChHHH
Q psy1055 74 ETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVS--PTL----RHMSGLFDAMKSVNLDELSGQPLHAV 147 (256)
Q Consensus 74 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (256)
++.|..++-+.|.||||.+|...|..+|..|..+-++..+..... ... ..+....+.+....+. +.
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~-------~~- 241 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYE-------EE- 241 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchh-------hh-
Confidence 777999999999999999999999999998876666542211000 000 0111111111000000 00
Q ss_pred HHHHHHHHHhhccCCC-Cce-eeeeChHHHHHhhh--h---hccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhc
Q psy1055 148 RKIVDKALATAVDLKG-KQI-IWQCNLDSLQTQFF--N---HMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSL 220 (256)
Q Consensus 148 ~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~---~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 220 (256)
...+........ ... ......+....... + .+..++.. .-.-.+.++.+++|.++|......+++.
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P---~dp~~ii~V~A~~DaYVPr~~v~~Lq~~ 314 (348)
T PF09752_consen 242 ----ISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVP---VDPSAIIFVAAKNDAYVPRHGVLSLQEI 314 (348)
T ss_pred ----hcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCC---CCCCcEEEEEecCceEechhhcchHHHh
Confidence 000000000000 000 00001111111110 1 11222210 1234678899999999999888899999
Q ss_pred CCCCeEEEecCCCccc-cccCchHHHHHHHHHHhh
Q psy1055 221 FPRAEITYIEDAGHWV-HSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 221 ~~~~~~~~i~~~GH~~-~~e~p~~~~~~i~~fl~~ 254 (256)
-|+++++.+++ ||.. ++-+.+.|.+.|.+=+++
T Consensus 315 WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 315 WPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred CCCCeEEEecC-CcEEEeeechHHHHHHHHHHhhC
Confidence 99999999986 9988 777889999999886653
No 106
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.98 E-value=2.1e-09 Score=93.60 Aligned_cols=86 Identities=13% Similarity=0.162 Sum_probs=66.8
Q ss_pred cchhcHHHHHHHHHhhcCcee--cccccccCCCCC---CCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 27 GSKNNWNSLAKAIHRKTKKKI--ARNHGDSPHTDV---FSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 27 ~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~~~~---~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
....+|..+++.|.+.+++.- ++|+|-+.+... ..++++.+.|.++.++.+..+++||||||||.+++.++..+|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 456889999999999875443 899998766431 124556666666666678889999999999999999999999
Q ss_pred CC----cccEEEEeC
Q psy1055 102 HL----VSSLIVVDI 112 (256)
Q Consensus 102 ~~----v~~lil~~~ 112 (256)
+. |+++|.+++
T Consensus 185 ~~~~k~I~~~I~la~ 199 (440)
T PLN02733 185 DVFEKYVNSWIAIAA 199 (440)
T ss_pred HhHHhHhccEEEECC
Confidence 64 788888864
No 107
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.95 E-value=4.7e-08 Score=86.24 Aligned_cols=97 Identities=21% Similarity=0.177 Sum_probs=64.2
Q ss_pred CCCCEEEEcCCccchhcHHHHHH-----------HHH-------hhcCce-e--cccccccCCC-C--CCCHHHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAK-----------AIH-------RKTKKK-I--ARNHGDSPHT-D--VFSYAHLAEDVK 70 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~-----------~l~-------~~~~~~-v--~~ghG~S~~~-~--~~s~~~~a~dl~ 70 (256)
+.|.|+.++|.+|++.++..+.+ .+. +....+ + ..|+|.|-.. . ..+.++.++|+.
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~ 155 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMY 155 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHH
Confidence 45778889999999887644331 111 111112 2 3588887432 1 235678999999
Q ss_pred HHHHH-------cCCCceeEEeeChhHHHHHHHHHhC----------CCCcccEEEEe
Q psy1055 71 YFLET-------ESIAQADVLGHSMGGRAMMYLALAN----------PHLVSSLIVVD 111 (256)
Q Consensus 71 ~~l~~-------l~~~~~~lvGhS~Gg~ia~~~A~~~----------P~~v~~lil~~ 111 (256)
++++. ++..+++|+|||+||.++-.+|.+- +=.++++++.+
T Consensus 156 ~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 156 NFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred HHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 98884 3457899999999999987777531 12467887766
No 108
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.92 E-value=4e-08 Score=91.57 Aligned_cols=77 Identities=14% Similarity=0.033 Sum_probs=54.8
Q ss_pred HHHHHHHhhcCcee---cccccccCCCCC-CCHHHHHHH---HHHHHHHcC-----------------CCceeEEeeChh
Q psy1055 34 SLAKAIHRKTKKKI---ARNHGDSPHTDV-FSYAHLAED---VKYFLETES-----------------IAQADVLGHSMG 89 (256)
Q Consensus 34 ~~~~~l~~~~~~~v---~~ghG~S~~~~~-~s~~~~a~d---l~~~l~~l~-----------------~~~~~lvGhS~G 89 (256)
.+.+.|.++++.+| .||+|.|+.... +. ..-.+| +++++.... -.++-++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 35577887777665 799999976432 22 223334 444554210 258999999999
Q ss_pred HHHHHHHHHhCCCCcccEEEEe
Q psy1055 90 GRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 90 g~ia~~~A~~~P~~v~~lil~~ 111 (256)
|.+++.+|...|+.++++|.+.
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a 370 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEA 370 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeC
Confidence 9999999999999999999754
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.92 E-value=9.3e-09 Score=81.41 Aligned_cols=93 Identities=16% Similarity=0.242 Sum_probs=55.3
Q ss_pred EEEEcCCcc---chhcHHHHHHHHHh-hcCceecccccccCCCCC-CCHHHHHHHHHHHHHH-----cCCCceeEEeeCh
Q psy1055 19 IIIMHGLLG---SKNNWNSLAKAIHR-KTKKKIARNHGDSPHTDV-FSYAHLAEDVKYFLET-----ESIAQADVLGHSM 88 (256)
Q Consensus 19 iv~lHG~~~---~~~~w~~~~~~l~~-~~~~~v~~ghG~S~~~~~-~s~~~~a~dl~~~l~~-----l~~~~~~lvGhS~ 88 (256)
||++||++- +......++..+++ .+..++...|-.++.... -.+++..+-+..+++. .+.++++|+|+|-
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 789999864 34444555666664 544444333333432221 1245555555555565 3456899999999
Q ss_pred hHHHHHHHHHhCCC----CcccEEEEe
Q psy1055 89 GGRAMMYLALANPH----LVSSLIVVD 111 (256)
Q Consensus 89 Gg~ia~~~A~~~P~----~v~~lil~~ 111 (256)
||.+++.++.+..+ .+++++++.
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~ 107 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILIS 107 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEES
T ss_pred ccchhhhhhhhhhhhcccchhhhhccc
Confidence 99999999875433 388888875
No 110
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.91 E-value=3e-09 Score=70.40 Aligned_cols=67 Identities=21% Similarity=0.372 Sum_probs=55.1
Q ss_pred CCCCCCCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCCC--CCHHHHHHHHHHHHH
Q psy1055 8 TETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDV--FSYAHLAEDVKYFLE 74 (256)
Q Consensus 8 ~~~~~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~--~s~~~~a~dl~~~l~ 74 (256)
.|.|.++....|+++||++.++..+..++..|+++++.++ +||||+|+.... -+++++.+|+..+++
T Consensus 8 ~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3566665566899999999999999999999999877665 899999975432 479999999999874
No 111
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.91 E-value=1.6e-09 Score=85.68 Aligned_cols=83 Identities=25% Similarity=0.429 Sum_probs=50.4
Q ss_pred CCEEEEcCCcc-chhcHHHHHHHHHhhcCce--e-cccccccCCCCC--------CCHHHHHHHHHHHHHHcCCCceeEE
Q psy1055 17 KPIIIMHGLLG-SKNNWNSLAKAIHRKTKKK--I-ARNHGDSPHTDV--------FSYAHLAEDVKYFLETESIAQADVL 84 (256)
Q Consensus 17 ~~iv~lHG~~~-~~~~w~~~~~~l~~~~~~~--v-~~ghG~S~~~~~--------~s~~~~a~dl~~~l~~l~~~~~~lv 84 (256)
.||||+||.++ ....|..+++.|++++++. + -..+|....... .+..++++-|.+++++-|- |+.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 59999999999 6688999999999988764 3 333443222110 1123455555555556687 99999
Q ss_pred eeChhHHHHHHHHHhC
Q psy1055 85 GHSMGGRAMMYLALAN 100 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~ 100 (256)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998776533
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.89 E-value=7.9e-08 Score=70.64 Aligned_cols=175 Identities=22% Similarity=0.328 Sum_probs=113.0
Q ss_pred CCEEEEcCCccchh--cHHHHHHHHHhhcCcee--------cccccc-cCCCCCCCH-HHHHHHHHHHHHHcCCCceeEE
Q psy1055 17 KPIIIMHGLLGSKN--NWNSLAKAIHRKTKKKI--------ARNHGD-SPHTDVFSY-AHLAEDVKYFLETESIAQADVL 84 (256)
Q Consensus 17 ~~iv~lHG~~~~~~--~w~~~~~~l~~~~~~~v--------~~ghG~-S~~~~~~s~-~~~a~dl~~~l~~l~~~~~~lv 84 (256)
-.||+-||-+++.. ....++..|+..+..++ .|-.|+ -+++..-+. ..+...++++.+.+.-.+.++-
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 36899999988654 46778888887765554 233342 222222333 5678888899998887899999
Q ss_pred eeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCC
Q psy1055 85 GHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGK 164 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (256)
||||||-++.+.|..-.-.|..|+|++ .|+.++.. + +..+
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clg-YPfhppGK----------------------P-e~~R---------------- 134 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLG-YPFHPPGK----------------------P-EQLR---------------- 134 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEec-CccCCCCC----------------------c-ccch----------------
Confidence 999999999888776554599999986 34332210 0 0000
Q ss_pred ceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccc-------
Q psy1055 165 QIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH------- 237 (256)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~------- 237 (256)
. +. ++ .+++|+||.+|+.|.+=+.+....+. .-+..++++++++-|-+-
T Consensus 135 -----------t----~H---L~-----gl~tPtli~qGtrD~fGtr~~Va~y~-ls~~iev~wl~~adHDLkp~k~vsg 190 (213)
T COG3571 135 -----------T----EH---LT-----GLKTPTLITQGTRDEFGTRDEVAGYA-LSDPIEVVWLEDADHDLKPRKLVSG 190 (213)
T ss_pred -----------h----hh---cc-----CCCCCeEEeecccccccCHHHHHhhh-cCCceEEEEeccCcccccccccccc
Confidence 0 01 11 56789999999999876654332211 236789999999999762
Q ss_pred ---ccCchHHHHHHHHHHhhc
Q psy1055 238 ---SQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 238 ---~e~p~~~~~~i~~fl~~~ 255 (256)
.++=...++.|..|..++
T Consensus 191 ls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 191 LSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred ccHHHHHHHHHHHHHHHHhhc
Confidence 122334556666666554
No 113
>PRK10115 protease 2; Provisional
Probab=98.89 E-value=5.8e-08 Score=89.76 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=70.4
Q ss_pred CCCCCCEEEEcCCccchh--cHHHHHHHHHhhcCcee---cccccccC-------C--CCCCCHHHHHHHHHHHHHHcCC
Q psy1055 13 DPDTKPIIIMHGLLGSKN--NWNSLAKAIHRKTKKKI---ARNHGDSP-------H--TDVFSYAHLAEDVKYFLETESI 78 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~--~w~~~~~~l~~~~~~~v---~~ghG~S~-------~--~~~~s~~~~a~dl~~~l~~l~~ 78 (256)
+++.|.||++||..+... .|......|.+.++.++ .||-|+=+ . ...-+++|+++-+..++++ ++
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~ 520 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GY 520 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CC
Confidence 344577888999887653 46676777887776554 67643221 1 1224677777777777665 43
Q ss_pred ---CceeEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 79 ---AQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 79 ---~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
+++.+.|-|.||+++...+.++|++++++|+.
T Consensus 521 ~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~ 555 (686)
T PRK10115 521 GSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQ 555 (686)
T ss_pred CChHHeEEEEECHHHHHHHHHHhcChhheeEEEec
Confidence 47999999999999999999999999999974
No 114
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.88 E-value=5e-09 Score=83.16 Aligned_cols=159 Identities=17% Similarity=0.232 Sum_probs=82.1
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHH----h-hcCce-e-----c-ccccccC-----------C---------CC----C
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIH----R-KTKKK-I-----A-RNHGDSP-----------H---------TD----V 59 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~----~-~~~~~-v-----~-~ghG~S~-----------~---------~~----~ 59 (256)
.+-|+||||+++|...|+.+...|. + .+..+ + . ++-|-.+ . .. .
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 5669999999999999987665544 3 22111 2 2 2221110 0 00 1
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhC--------CCCcccEEEEeCCCCCCCCchhhHHHHHHHH
Q psy1055 60 FSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALAN--------PHLVSSLIVVDISPVGVSPTLRHMSGLFDAM 131 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~--------P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 131 (256)
..+++..+.|.+++++.|- =.-|+|+|.||.+|..++... ...++-+|++.... .. .
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~--p~-~----------- 148 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP--PP-D----------- 148 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES------E-E-----------
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC--CC-c-----------
Confidence 2356777777788877662 245899999999998887532 12356666654211 00 0
Q ss_pred HhcCcccccCCChHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccC
Q psy1055 132 KSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQ 211 (256)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~ 211 (256)
. . .. ... ....|++|+|.|.|++|.++++
T Consensus 149 ------~-------~------------~~---------------------~~~-----~~~~i~iPtlHv~G~~D~~~~~ 177 (212)
T PF03959_consen 149 ------P-------D------------YQ---------------------ELY-----DEPKISIPTLHVIGENDPVVPP 177 (212)
T ss_dssp ------E--------------------GT---------------------TTT-------TT---EEEEEEETT-SSS-H
T ss_pred ------h-------h------------hh---------------------hhh-----ccccCCCCeEEEEeCCCCCcch
Confidence 0 0 00 000 0116789999999999999998
Q ss_pred CChhHHhhcCCC-CeEEEecCCCccccccCc
Q psy1055 212 EDHPGIKSLFPR-AEITYIEDAGHWVHSQKP 241 (256)
Q Consensus 212 ~~~~~~~~~~~~-~~~~~i~~~GH~~~~e~p 241 (256)
+.++.+.+.+.+ .+++..+ .||.++...+
T Consensus 178 ~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 178 ERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp HHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred HHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 888888888877 6666665 6999987754
No 115
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.87 E-value=3.9e-08 Score=77.88 Aligned_cols=114 Identities=20% Similarity=0.208 Sum_probs=71.9
Q ss_pred CcceeccCCCCCCCCCCCEEEEcCCccchhcHHHH--HHHHHhhcCcee-cc-cccc----c--C------CCCCCCHHH
Q psy1055 1 MSFKVADTETPVDPDTKPIIIMHGLLGSKNNWNSL--AKAIHRKTKKKI-AR-NHGD----S--P------HTDVFSYAH 64 (256)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~iv~lHG~~~~~~~w~~~--~~~l~~~~~~~v-~~-ghG~----S--~------~~~~~s~~~ 64 (256)
.||++.-...-.....|-||++||.+++...+... ...|++....++ +| +... . . ....-....
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 36777766532222345677899999998776543 446776654444 33 2111 0 0 000011233
Q ss_pred HHHHHHHHHHHcCCC--ceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 65 LAEDVKYFLETESIA--QADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
+++-|..+.++.+++ ++++.|+|.||+.+..++..|||.+.++.+....+
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 344444455566664 79999999999999999999999999988875444
No 116
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.85 E-value=3.4e-07 Score=68.56 Aligned_cols=171 Identities=13% Similarity=0.180 Sum_probs=109.4
Q ss_pred CCCEEEEcCCccch-hcHHHHHH-HHHhhcCcee-cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHH
Q psy1055 16 TKPIIIMHGLLGSK-NNWNSLAK-AIHRKTKKKI-ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRA 92 (256)
Q Consensus 16 ~~~iv~lHG~~~~~-~~w~~~~~-~l~~~~~~~v-~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~i 92 (256)
.+.++.+||..+|. ..|...-. .|... +.+ +. ......+++|.+.+.+-+... -++++||+||+|+.+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l~~a--~rveq~------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~ 72 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESALPNA--RRVEQD------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCAT 72 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhCccc--hhcccC------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHH
Confidence 35688999998764 44765322 22211 111 11 112246888888888888877 345999999999999
Q ss_pred HHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCCCCceeeeeCh
Q psy1055 93 MMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNL 172 (256)
Q Consensus 93 a~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (256)
+..++.+.-.+|++++|+.+ |. ... + .......-
T Consensus 73 v~h~~~~~~~~V~GalLVAp-pd-~~~-------------------------~----~~~~~~~~--------------- 106 (181)
T COG3545 73 VAHWAEHIQRQVAGALLVAP-PD-VSR-------------------------P----EIRPKHLM--------------- 106 (181)
T ss_pred HHHHHHhhhhccceEEEecC-CC-ccc-------------------------c----ccchhhcc---------------
Confidence 99999887779999999852 21 000 0 00000000
Q ss_pred HHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccccc---CchHHHHHHH
Q psy1055 173 DSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQ---KPDLFVDKVV 249 (256)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e---~p~~~~~~i~ 249 (256)
.+...+ ..+..-|.+++..++|++++.+.++.+++.. ++.++.+.++||.--.+ .-.+....+.
T Consensus 107 ---------tf~~~p---~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~ 173 (181)
T COG3545 107 ---------TFDPIP---REPLPFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGFGPWPEGYALLA 173 (181)
T ss_pred ---------ccCCCc---cccCCCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcCCCcHHHHHHHH
Confidence 001111 1133458999999999999999998888876 57888888899986333 3345566666
Q ss_pred HHHhh
Q psy1055 250 DFYRS 254 (256)
Q Consensus 250 ~fl~~ 254 (256)
+|+.+
T Consensus 174 ~~~s~ 178 (181)
T COG3545 174 QLLSR 178 (181)
T ss_pred HHhhh
Confidence 66654
No 117
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.85 E-value=2.3e-08 Score=80.40 Aligned_cols=99 Identities=22% Similarity=0.290 Sum_probs=65.0
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCceecc---cccccCCCCC-CCHHHHHHHHHH-HHHHc------CCCcee
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIAR---NHGDSPHTDV-FSYAHLAEDVKY-FLETE------SIAQAD 82 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~---ghG~S~~~~~-~s~~~~a~dl~~-~l~~l------~~~~~~ 82 (256)
++-|.+||+||+......+..+.++++.+++.+|.. ..+......+ .+....++.+.+ +-..+ +.+++.
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~ 94 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLA 94 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceE
Confidence 445778899999966666678999999998777622 2221111110 112222222222 11111 456899
Q ss_pred EEeeChhHHHHHHHHHhC-----CCCcccEEEEeC
Q psy1055 83 VLGHSMGGRAMMYLALAN-----PHLVSSLIVVDI 112 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~-----P~~v~~lil~~~ 112 (256)
|.|||-||-+|..+|+.+ +.++++++++|+
T Consensus 95 l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNASSSLDLRFSALILLDP 129 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcccccccceeEEEEecc
Confidence 999999999999999988 678999999983
No 118
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.83 E-value=2.7e-07 Score=70.03 Aligned_cols=168 Identities=19% Similarity=0.239 Sum_probs=104.8
Q ss_pred CCCCCEEEEcCC-----ccchhcHHHHHHHHHhhcCcee---cccccccCCCCCC---CHHHHHHHHHHHHHHcCCCc-e
Q psy1055 14 PDTKPIIIMHGL-----LGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVF---SYAHLAEDVKYFLETESIAQ-A 81 (256)
Q Consensus 14 ~~~~~iv~lHG~-----~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~~~---s~~~~a~dl~~~l~~l~~~~-~ 81 (256)
+..+..|.+|=. .-+...-..++..|.+.++.++ +||-|+|...-+. ..+|....+.-+.++.-..+ .
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 334445556633 3333344556667777776665 8999999765433 34555544444444443333 4
Q ss_pred eEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccC
Q psy1055 82 DVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDL 161 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (256)
.|.|.|+|++|++.+|.+.|+.---+.. .|. . . .+.
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e~~~~is~---~p~----------------------~--~------------~~d----- 141 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPEILVFISI---LPP----------------------I--N------------AYD----- 141 (210)
T ss_pred hhcccchHHHHHHHHHHhcccccceeec---cCC----------------------C--C------------chh-----
Confidence 7899999999999999999873222211 110 0 0 000
Q ss_pred CCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCc
Q psy1055 162 KGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKP 241 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p 241 (256)
+. .+. ...+|.++|+|+.|+.++....-..++- ...+++.++++.|+.+-. -
T Consensus 142 -----------------fs-~l~--------P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gK-l 193 (210)
T COG2945 142 -----------------FS-FLA--------PCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGK-L 193 (210)
T ss_pred -----------------hh-hcc--------CCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceeccc-H
Confidence 00 000 2356999999999988876554444444 356789999999998755 6
Q ss_pred hHHHHHHHHHHh
Q psy1055 242 DLFVDKVVDFYR 253 (256)
Q Consensus 242 ~~~~~~i~~fl~ 253 (256)
+++.+.|.+|+.
T Consensus 194 ~~l~~~i~~~l~ 205 (210)
T COG2945 194 IELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHHhh
Confidence 778999999984
No 119
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.77 E-value=2.4e-08 Score=79.55 Aligned_cols=79 Identities=18% Similarity=0.346 Sum_probs=51.9
Q ss_pred CEEEEcCCccchhcHHHHHHHHHh---hcC--ceecccccccCCCCCCCH----HHHHHHHHHHHHHcCCC--ceeEEee
Q psy1055 18 PIIIMHGLLGSKNNWNSLAKAIHR---KTK--KKIARNHGDSPHTDVFSY----AHLAEDVKYFLETESIA--QADVLGH 86 (256)
Q Consensus 18 ~iv~lHG~~~~~~~w~~~~~~l~~---~~~--~~v~~ghG~S~~~~~~s~----~~~a~dl~~~l~~l~~~--~~~lvGh 86 (256)
-|||+||+.++...|..+.+.+.. ... +++..++..........+ ++++++|.+.++..... ++++|||
T Consensus 6 LvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgH 85 (217)
T PF05057_consen 6 LVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFIGH 85 (217)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEEEe
Confidence 599999999999999988888776 221 222333322111111223 45666666666666544 8999999
Q ss_pred ChhHHHHHHH
Q psy1055 87 SMGGRAMMYL 96 (256)
Q Consensus 87 S~Gg~ia~~~ 96 (256)
||||.|+-.+
T Consensus 86 SLGGli~r~a 95 (217)
T PF05057_consen 86 SLGGLIARYA 95 (217)
T ss_pred cccHHHHHHH
Confidence 9999999644
No 120
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.76 E-value=2.6e-08 Score=78.97 Aligned_cols=99 Identities=23% Similarity=0.203 Sum_probs=67.2
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCceeccc-ccccCCC--CC-CCHHHHHHHHHHHHHHc-------CCCcee
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARN-HGDSPHT--DV-FSYAHLAEDVKYFLETE-------SIAQAD 82 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~g-hG~S~~~--~~-~s~~~~a~dl~~~l~~l-------~~~~~~ 82 (256)
+.-|.|+|+||+....+.+..+...++.+++.+|.+. +...... .+ .+....++++-.-++++ +++++.
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 4456688899999998888999999999877666322 1111111 11 23344444544444443 567899
Q ss_pred EEeeChhHHHHHHHHHhCC--CCcccEEEEeC
Q psy1055 83 VLGHSMGGRAMMYLALANP--HLVSSLIVVDI 112 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~P--~~v~~lil~~~ 112 (256)
++|||.||.+|.++|+.+- -.+.+||-+|+
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDP 155 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDP 155 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheecccc
Confidence 9999999999999999874 35677777773
No 121
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.75 E-value=1.2e-08 Score=81.07 Aligned_cols=50 Identities=22% Similarity=0.389 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHc-CC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCC
Q psy1055 65 LAEDVKYFLETE-SI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPV 115 (256)
Q Consensus 65 ~a~dl~~~l~~l-~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~ 115 (256)
+-++..+++... .+ +++.|+|.|.||-+|+.+|..+| .|+++|.+.++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 345666667666 33 58999999999999999999999 7999999875543
No 122
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.75 E-value=2e-07 Score=72.65 Aligned_cols=224 Identities=17% Similarity=0.189 Sum_probs=120.9
Q ss_pred CCCCCCCCEEEEcCCcc-chhcHHHHHHHHHhhcCcee---cccccccCCCC----CCCHHHHHH-HHHHHHHHc----C
Q psy1055 11 PVDPDTKPIIIMHGLLG-SKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD----VFSYAHLAE-DVKYFLETE----S 77 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~-~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~----~~s~~~~a~-dl~~~l~~l----~ 77 (256)
|.+++.+-.+++-|.++ ....++.++..+.+.++.++ +||-|.|+... .+++.|++. |+.+.++.+ .
T Consensus 24 pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~ 103 (281)
T COG4757 24 PADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP 103 (281)
T ss_pred cCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCC
Confidence 33344443455555444 55556888888888877665 89999986532 355655542 444444444 4
Q ss_pred CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCc--ccc-----------cCCCh
Q psy1055 78 IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNL--DEL-----------SGQPL 144 (256)
Q Consensus 78 ~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------~~~~~ 144 (256)
--+.++||||+||-+...+ .++| ++.+....++.+. ..... ....-.......++ +.+ .+..
T Consensus 104 ~~P~y~vgHS~GGqa~gL~-~~~~-k~~a~~vfG~gag-wsg~m-~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G- 178 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLL-GQHP-KYAAFAVFGSGAG-WSGWM-GLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLG- 178 (281)
T ss_pred CCceEEeeccccceeeccc-ccCc-ccceeeEeccccc-cccch-hhhhcccceeeccccccchhhccccCcHhhcCCC-
Confidence 4578999999999876444 4556 5666665554332 11110 00000011100010 000 0000
Q ss_pred HHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCC
Q psy1055 145 HAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA 224 (256)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 224 (256)
+.......+.+.++...+. + ....+..... .+. ...+++|++.+...+|+.+|+...+.+.+..+|+
T Consensus 179 ~d~p~~v~RdW~RwcR~p~--y--~fddp~~~~~-~q~--------yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA 245 (281)
T COG4757 179 SDLPGTVMRDWARWCRHPR--Y--YFDDPAMRNY-RQV--------YAAVRTPITFSRALDDPWAPPASRDAFASFYRNA 245 (281)
T ss_pred ccCcchHHHHHHHHhcCcc--c--cccChhHhHH-HHH--------HHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC
Confidence 0001112234444443221 1 1111111110 001 1166889999999999999998888888888776
Q ss_pred e--EEEecC----CCccccccCc-hHHHHHHHHHH
Q psy1055 225 E--ITYIED----AGHWVHSQKP-DLFVDKVVDFY 252 (256)
Q Consensus 225 ~--~~~i~~----~GH~~~~e~p-~~~~~~i~~fl 252 (256)
. ...++. -||+-+.-+| |.+-+.+.+|+
T Consensus 246 pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 246 PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 4 445544 4999998888 66666555554
No 123
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.69 E-value=1.6e-06 Score=68.31 Aligned_cols=202 Identities=16% Similarity=0.229 Sum_probs=100.7
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCcee----cccccccCC-CCCCCHHHHHHHHHHHHHH---cCCCceeEEeeC
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPH-TDVFSYAHLAEDVKYFLET---ESIAQADVLGHS 87 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~-~~~~s~~~~a~dl~~~l~~---l~~~~~~lvGhS 87 (256)
.++||+-.||+.....+..++.+|+..+++++ +.--|.|+. ..++|++...+++..+++- -|..++-||.-|
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaS 109 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRGIRRIGLIAAS 109 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHHTT---EEEEEET
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhh
Confidence 46789999999999999999999999988887 444588766 4568888888887766554 488899999999
Q ss_pred hhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHH-HHhcCccc----cc---CCC-hH-HHHHHHHHHHHh
Q psy1055 88 MGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDA-MKSVNLDE----LS---GQP-LH-AVRKIVDKALAT 157 (256)
Q Consensus 88 ~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~---~~~-~~-~~~~~~~~~~~~ 157 (256)
+-|-||+..|.+- .+.-||..- +.- +++..++. +...++.. +. .+. .. ..... +..
T Consensus 110 LSaRIAy~Va~~i--~lsfLitaV----GVV----nlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vF----v~d 175 (294)
T PF02273_consen 110 LSARIAYEVAADI--NLSFLITAV----GVV----NLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVF----VTD 175 (294)
T ss_dssp THHHHHHHHTTTS----SEEEEES------S-----HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHH----HHH
T ss_pred hhHHHHHHHhhcc--CcceEEEEe----eee----eHHHHHHHHhccchhhcchhhCCCcccccccccchHHH----HHH
Confidence 9999999999843 366666532 211 22222222 11111110 00 000 00 00000 111
Q ss_pred hccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC--CCCeEEEecCCCcc
Q psy1055 158 AVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF--PRAEITYIEDAGHW 235 (256)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~GH~ 235 (256)
.++. .|. ......+ . .+++.+|.+..++++|.++.+.....+...+ +.++++.+++++|-
T Consensus 176 c~e~-----~w~-~l~ST~~----~--------~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 176 CFEH-----GWD-DLDSTIN----D--------MKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp HHHT-----T-S-SHHHHHH----H--------HTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred HHHc-----CCc-cchhHHH----H--------HhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccch
Confidence 1110 010 0111111 1 1267899999999999999987776666644 45789999999998
Q ss_pred ccccCchHHHHHHHHHHhh
Q psy1055 236 VHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 236 ~~~e~p~~~~~~i~~fl~~ 254 (256)
+-. + ...+++|.++
T Consensus 238 L~e-n----l~vlrnfy~s 251 (294)
T PF02273_consen 238 LGE-N----LVVLRNFYQS 251 (294)
T ss_dssp TTS-S----HHHHHHHHHH
T ss_pred hhh-C----hHHHHHHHHH
Confidence 743 2 3455666554
No 124
>KOG1515|consensus
Probab=98.67 E-value=2.4e-06 Score=71.89 Aligned_cols=221 Identities=15% Similarity=0.134 Sum_probs=118.0
Q ss_pred CCCCCEEEEcCCcc-----chhcHHHHHHHHHhhcCcee-cccccccCCCC-CCCHHHHHHHHHHHHHH------cCCCc
Q psy1055 14 PDTKPIIIMHGLLG-----SKNNWNSLAKAIHRKTKKKI-ARNHGDSPHTD-VFSYAHLAEDVKYFLET------ESIAQ 80 (256)
Q Consensus 14 ~~~~~iv~lHG~~~-----~~~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~-~~s~~~~a~dl~~~l~~------l~~~~ 80 (256)
..-|.||++||++- +...+..+...+++.-.+++ -.++=.++..+ +-.++|--+.+..+.++ .+-++
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r 167 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSR 167 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCccc
Confidence 34567999999964 34556778888876656554 45555554422 23466666666666664 25578
Q ss_pred eeEEeeChhHHHHHHHHHh------CCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHH
Q psy1055 81 ADVLGHSMGGRAMMYLALA------NPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKA 154 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~------~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
+.|+|-|-||.||..+|.+ .+-++++.|++-+.-.+........+.. ... . ....+......
T Consensus 168 v~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~---~~~-~--------~~~~~~~~~~~ 235 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQN---LNG-S--------PELARPKIDKW 235 (336)
T ss_pred EEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHh---hcC-C--------cchhHHHHHHH
Confidence 9999999999999888753 2468999999753221222111111111 100 0 11122222223
Q ss_pred HHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCC-CeeEEecCCCCCccCC--ChhHHhhcCCCCeEEEecC
Q psy1055 155 LATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGG-PTLFIGGGRSDFIRQE--DHPGIKSLFPRAEITYIED 231 (256)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~lii~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~ 231 (256)
+...+.+.... . ..+.+.. .............+ |+|++.++.|.+.+.. ..+.+++.--..++...++
T Consensus 236 w~~~lP~~~~~--~--~~p~~np-----~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~ 306 (336)
T KOG1515|consen 236 WRLLLPNGKTD--L--DHPFINP-----VGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYED 306 (336)
T ss_pred HHHhCCCCCCC--c--CCccccc-----cccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECC
Confidence 33222111100 0 0001100 00000000112233 5999999998776532 1334444322345567899
Q ss_pred CCccccccCch-----HHHHHHHHHHhhc
Q psy1055 232 AGHWVHSQKPD-----LFVDKVVDFYRSL 255 (256)
Q Consensus 232 ~GH~~~~e~p~-----~~~~~i~~fl~~~ 255 (256)
++|..++=.|. ++.+.+.+|+.+.
T Consensus 307 ~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 307 GFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 99999877665 5667777777653
No 125
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.67 E-value=2.2e-07 Score=73.31 Aligned_cols=98 Identities=19% Similarity=0.288 Sum_probs=71.1
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCce---e-----ccc----ccccCC----C--------CCCCHHHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKK---I-----ARN----HGDSPH----T--------DVFSYAHLAEDVK 70 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~---v-----~~g----hG~S~~----~--------~~~s~~~~a~dl~ 70 (256)
...|.+||||++|+.++...++.+|.+.+++. + -.| -|.=++ + ..-+..+++..+.
T Consensus 44 ~~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 44 VAIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 35699999999999999999999999876321 1 233 121111 0 1135667788888
Q ss_pred HHHHHc----CCCceeEEeeChhHHHHHHHHHhCC-----CCcccEEEEeC
Q psy1055 71 YFLETE----SIAQADVLGHSMGGRAMMYLALANP-----HLVSSLIVVDI 112 (256)
Q Consensus 71 ~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~P-----~~v~~lil~~~ 112 (256)
.+++.| +++++.+|||||||.-...|+..+- ..++++|.++.
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~g 174 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAG 174 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecc
Confidence 777766 7899999999999998888887542 25899998874
No 126
>PRK04940 hypothetical protein; Provisional
Probab=98.65 E-value=2.4e-06 Score=65.06 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=36.7
Q ss_pred CeeEEecCCCCCccCCChhHHhhcCCCC-eEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 197 PTLFIGGGRSDFIRQEDHPGIKSLFPRA-EITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 197 P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
..+++..+.|...+ .+...+.+.++ ++.+.+++.|- +. .=++....|.+|+.
T Consensus 126 r~~vllq~gDEvLD---yr~a~~~y~~~y~~~v~~GGdH~-f~-~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLD---SQRTAEELHPYYEIVWDEEQTHK-FK-NISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccC---HHHHHHHhccCceEEEECCCCCC-CC-CHHHHHHHHHHHHh
Confidence 35777788888775 56666667777 88888875554 33 34557788888875
No 127
>KOG4627|consensus
Probab=98.59 E-value=1.1e-07 Score=72.86 Aligned_cols=189 Identities=13% Similarity=0.122 Sum_probs=101.3
Q ss_pred eccCCCCCCCCCCCEEEEcCCcc---chhcHHHHHHHHHhhcCceecccccccCCCCC--CCHHHHHHHHHHHHHHc-CC
Q psy1055 5 VADTETPVDPDTKPIIIMHGLLG---SKNNWNSLAKAIHRKTKKKIARNHGDSPHTDV--FSYAHLAEDVKYFLETE-SI 78 (256)
Q Consensus 5 ~~~~~~~~~~~~~~iv~lHG~~~---~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~--~s~~~~a~dl~~~l~~l-~~ 78 (256)
.+|-|.| +...+..|||||..- +..+=-..+.-+.+.+++++--|++.++.... .++.+...-+.-+++.. +.
T Consensus 57 ~VDIwg~-~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~ 135 (270)
T KOG4627|consen 57 LVDIWGS-TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENT 135 (270)
T ss_pred EEEEecC-CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccc
Confidence 3566666 345678999999853 22222222222333445566667887754421 23344444444455555 44
Q ss_pred CceeEEeeChhHHHHHHH-HHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHh
Q psy1055 79 AQADVLGHSMGGRAMMYL-ALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALAT 157 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~-A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
+++.+-|||.|+-+|+.. +..+..+|.++++... +. .++.+...... .
T Consensus 136 k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G--vY----------~l~EL~~te~g-------------------~ 184 (270)
T KOG4627|consen 136 KVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG--VY----------DLRELSNTESG-------------------N 184 (270)
T ss_pred eeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh--Hh----------hHHHHhCCccc-------------------c
Confidence 567778999999888754 5566668888887431 10 00111100000 0
Q ss_pred hccCCCCc-eeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccc
Q psy1055 158 AVDLKGKQ-IIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWV 236 (256)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~ 236 (256)
.+...... -...|+.. ....+++|+|+++|+++..--.+..+.++.....+++..++|.+|+-
T Consensus 185 dlgLt~~~ae~~Scdl~----------------~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 185 DLGLTERNAESVSCDLW----------------EYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYD 248 (270)
T ss_pred ccCcccchhhhcCccHH----------------HhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhh
Confidence 00000000 00011110 11166789999999988432222233444445569999999999998
Q ss_pred cccCc
Q psy1055 237 HSQKP 241 (256)
Q Consensus 237 ~~e~p 241 (256)
-+|.-
T Consensus 249 I~~~~ 253 (270)
T KOG4627|consen 249 IIEET 253 (270)
T ss_pred HHHHh
Confidence 77653
No 128
>KOG2624|consensus
Probab=98.59 E-value=9.4e-07 Score=75.92 Aligned_cols=99 Identities=19% Similarity=0.311 Sum_probs=70.2
Q ss_pred CCCCCEEEEcCCccchhcHHHH------HHHHHhhcCcee---cccccccCC--------CC---CCCHHHHH-HHHHHH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSL------AKAIHRKTKKKI---ARNHGDSPH--------TD---VFSYAHLA-EDVKYF 72 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~------~~~l~~~~~~~v---~~ghG~S~~--------~~---~~s~~~~a-~dl~~~ 72 (256)
+.+|||+|.||+.+++..|-.. +=.|++.++.+- .||---|.+ .. .+|+++++ .||-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 6678999999999999999543 335778776553 566332321 11 24665533 355555
Q ss_pred HHH----cCCCceeEEeeChhHHHHHHHHHhCCC---CcccEEEEeC
Q psy1055 73 LET----ESIAQADVLGHSMGGRAMMYLALANPH---LVSSLIVVDI 112 (256)
Q Consensus 73 l~~----l~~~~~~lvGhS~Gg~ia~~~A~~~P~---~v~~lil~~~ 112 (256)
|+. -+.++.+.||||.|+.+.+.+....|+ +|+..+++.+
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 444 477899999999999999999988876 7888888753
No 129
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.53 E-value=6.6e-06 Score=69.87 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=67.8
Q ss_pred CCCCEEEEcCCccchhcHH-----HHHHHHHhhcCcee---cccccccCCCCCCCH-----HHHHHHHHHHHHHcCCCce
Q psy1055 15 DTKPIIIMHGLLGSKNNWN-----SLAKAIHRKTKKKI---ARNHGDSPHTDVFSY-----AHLAEDVKYFLETESIAQA 81 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~-----~~~~~l~~~~~~~v---~~ghG~S~~~~~~s~-----~~~a~dl~~~l~~l~~~~~ 81 (256)
-++|++.+|=+.-..-+|+ ..+..|.+.+..+. .++-..+.. ..++ +.+.+.|..+++..+.+++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 4679999998876655553 46667777654442 333333322 2344 4455666677777899999
Q ss_pred eEEeeChhHHHHHHHHHhCCCC-cccEEEEe
Q psy1055 82 DVLGHSMGGRAMMYLALANPHL-VSSLIVVD 111 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~-v~~lil~~ 111 (256)
+++|++.||.++..+++.+|.+ |+++++..
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lt 214 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLT 214 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeee
Confidence 9999999999999999888887 99999875
No 130
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.52 E-value=5.8e-06 Score=69.58 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=58.1
Q ss_pred CCCCCEEEEcCCc---cchhcH-HHHHHHHHhhcCceecccccccCCC-CCCCHHHHHHHHHHHHHH---cCC--CceeE
Q psy1055 14 PDTKPIIIMHGLL---GSKNNW-NSLAKAIHRKTKKKIARNHGDSPHT-DVFSYAHLAEDVKYFLET---ESI--AQADV 83 (256)
Q Consensus 14 ~~~~~iv~lHG~~---~~~~~w-~~~~~~l~~~~~~~v~~ghG~S~~~-~~~s~~~~a~dl~~~l~~---l~~--~~~~l 83 (256)
...|.||++||.+ ++.... ..+...+...+..++...|=.++.. ..-.+++..+-+..+.++ +++ +++.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v 156 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAV 156 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEE
Confidence 3578899999986 344444 4445555555444444444444332 222355533333334433 344 57999
Q ss_pred EeeChhHHHHHHHHHhCCC----CcccEEEEe
Q psy1055 84 LGHSMGGRAMMYLALANPH----LVSSLIVVD 111 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~----~v~~lil~~ 111 (256)
+|+|-||.+++.++..-.+ .....+++.
T Consensus 157 ~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~ 188 (312)
T COG0657 157 AGDSAGGHLALALALAARDRGLPLPAAQVLIS 188 (312)
T ss_pred EecCcccHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 9999999999998875443 456666654
No 131
>KOG1551|consensus
Probab=98.51 E-value=1.3e-06 Score=69.37 Aligned_cols=57 Identities=25% Similarity=0.459 Sum_probs=50.6
Q ss_pred eeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccc-cccCchHHHHHHHHHHhhc
Q psy1055 198 TLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWV-HSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 198 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~-~~e~p~~~~~~i~~fl~~~ 255 (256)
+.++.+++|.+++......+++.-||++++.++ .||.. ++-+-++|.+.|.+-|+++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 566788899999998888999999999999999 69987 8889999999999998764
No 132
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.51 E-value=4.3e-07 Score=77.02 Aligned_cols=97 Identities=22% Similarity=0.249 Sum_probs=73.1
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCc---eecccccccCC--CCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKK---KIARNHGDSPH--TDVFSYAHLAEDVKYFLETESIAQADVLGHSMGG 90 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~---~v~~ghG~S~~--~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 90 (256)
..|+|++||+..+...|.++...+...... +....+..... ...-..+...+-|.+++...+-+++.|+||||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG 138 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGG 138 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccc
Confidence 459999999988988898888776654332 12222221111 2223457777888888888898999999999999
Q ss_pred HHHHHHHHhCC--CCcccEEEEeC
Q psy1055 91 RAMMYLALANP--HLVSSLIVVDI 112 (256)
Q Consensus 91 ~ia~~~A~~~P--~~v~~lil~~~ 112 (256)
.++.+++...+ .+|+.++-+++
T Consensus 139 ~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 139 LDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred hhhHHHHhhcCccceEEEEEEecc
Confidence 99999999888 89999999874
No 133
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.51 E-value=1.7e-07 Score=79.14 Aligned_cols=103 Identities=18% Similarity=0.291 Sum_probs=59.1
Q ss_pred CCCCCCCEEEEcCCccch--hcHH-HHHHHHHhh---cCcee-cccccccCCCCC---CCHHHHHHHHHHHHHHc-----
Q psy1055 12 VDPDTKPIIIMHGLLGSK--NNWN-SLAKAIHRK---TKKKI-ARNHGDSPHTDV---FSYAHLAEDVKYFLETE----- 76 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~--~~w~-~~~~~l~~~---~~~~v-~~ghG~S~~~~~---~s~~~~a~dl~~~l~~l----- 76 (256)
.+++.|.+|++|||.++. ..|- .+.+.|.++ ...+| ..-...+..... .+....++.|..+|+.|
T Consensus 67 fn~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 67 FNPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp --TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 567788999999999877 4674 456655433 22343 322111211110 11233444444444443
Q ss_pred -CCCceeEEeeChhHHHHHHHHHhCCC--CcccEEEEeCCC
Q psy1055 77 -SIAQADVLGHSMGGRAMMYLALANPH--LVSSLIVVDISP 114 (256)
Q Consensus 77 -~~~~~~lvGhS~Gg~ia~~~A~~~P~--~v~~lil~~~~~ 114 (256)
..+++||||||+||-||-..+..... +|..++-+|++.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 34689999999999999988887777 999999999643
No 134
>KOG3975|consensus
Probab=98.50 E-value=3.4e-06 Score=66.61 Aligned_cols=234 Identities=14% Similarity=0.164 Sum_probs=128.7
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCc-----ee-cccccccC--------CC--CCCCHHHHHHHHHHHHHHc-
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKK-----KI-ARNHGDSP--------HT--DVFSYAHLAEDVKYFLETE- 76 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~-----~v-~~ghG~S~--------~~--~~~s~~~~a~dl~~~l~~l- 76 (256)
.+.+-+++|.|.+|....+.+++..|...... .| --||-.-+ .. +.+|+++.++.=.+|++..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 34556788999999999999999988765321 12 34554321 11 3478999999999999887
Q ss_pred -CCCceeEEeeChhHHHHHHHHH-hCC-CCcccEEEEeCC-------CCCCCC--chhhHHHHHHHHHhcCcccccCCCh
Q psy1055 77 -SIAQADVLGHSMGGRAMMYLAL-ANP-HLVSSLIVVDIS-------PVGVSP--TLRHMSGLFDAMKSVNLDELSGQPL 144 (256)
Q Consensus 77 -~~~~~~lvGhS~Gg~ia~~~A~-~~P-~~v~~lil~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
...|++++|||.|+++.+.+.. ..+ -.|.+.+++-++ |.|... ....+...........+ ....
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~----~~lp 182 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYW----ILLP 182 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeee----ecCh
Confidence 3468999999999999998776 333 468888876431 211100 00000100000000000 0001
Q ss_pred HHHHHHHHHHHHhhccCCCCcee-ee--eC-hHHHHHhhh---h---hccCCCCCCCCCCCCCeeEEecCCCCCccCCCh
Q psy1055 145 HAVRKIVDKALATAVDLKGKQII-WQ--CN-LDSLQTQFF---N---HMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDH 214 (256)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~---~---~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 214 (256)
...+..+.+......+ .+.++. .+ .. .....+... + ...+....-..+-.+-+.+..|..|.++|...+
T Consensus 183 ~~ir~~Li~~~l~~~n-~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~ 261 (301)
T KOG3975|consen 183 GFIRFILIKFMLCGSN-GPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYY 261 (301)
T ss_pred HHHHHHHHHHhcccCC-CcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHH
Confidence 1111111111100000 000000 00 00 000000000 0 000000000012245788999999999999999
Q ss_pred hHHhhcCCCC--eEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 215 PGIKSLFPRA--EITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 215 ~~~~~~~~~~--~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
..+++.+|.. ++.. +++-|..-+...+..++++.+.++
T Consensus 262 d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 262 DYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred HHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 9999999864 4555 889999999999999999988763
No 135
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.48 E-value=6e-07 Score=71.69 Aligned_cols=203 Identities=15% Similarity=0.179 Sum_probs=115.7
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee--cccccccCC-------C---------------CCCCHHHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNHGDSPH-------T---------------DVFSYAHLAEDVK 70 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~ghG~S~~-------~---------------~~~s~~~~a~dl~ 70 (256)
.-|.||--||.+++...|.++...-...|-+.. .||-|.|.. . ..|=+...-.|+.
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 345677899999999888777665444333333 688876521 0 0111233444555
Q ss_pred HHHHHc------CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCCh
Q psy1055 71 YFLETE------SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPL 144 (256)
Q Consensus 71 ~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
..++.+ .-+++.+.|.|.||.|++..|+..| +++++++.= |+ ..++++.++.. .
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~--Pf-----l~df~r~i~~~---~--------- 221 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADY--PF-----LSDFPRAIELA---T--------- 221 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccc--cc-----cccchhheeec---c---------
Confidence 555544 3357999999999999999998888 588887642 32 11122211110 0
Q ss_pred HHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCC-CCCCCCCCeeEEecCCCCCccCCChhHHhhcCCC
Q psy1055 145 HAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQP-GEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPR 223 (256)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 223 (256)
... . .++...++.... ....+- ..+..+... -..++++|+|+.-|-.|+.++|...-.+.+.++.
T Consensus 222 ~~~---y-dei~~y~k~h~~------~e~~v~----~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~ 287 (321)
T COG3458 222 EGP---Y-DEIQTYFKRHDP------KEAEVF----ETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT 287 (321)
T ss_pred cCc---H-HHHHHHHHhcCc------hHHHHH----HHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC
Confidence 000 0 111111111000 000000 011111110 1128899999999999999999887778887775
Q ss_pred C-eEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 224 A-EITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 224 ~-~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
. ++++++.=+| .+-|.-..+.+..|+..
T Consensus 288 ~K~i~iy~~~aH---e~~p~~~~~~~~~~l~~ 316 (321)
T COG3458 288 SKTIEIYPYFAH---EGGPGFQSRQQVHFLKI 316 (321)
T ss_pred CceEEEeecccc---ccCcchhHHHHHHHHHh
Confidence 4 5667776554 55666667777777754
No 136
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.44 E-value=1.7e-06 Score=72.43 Aligned_cols=203 Identities=18% Similarity=0.183 Sum_probs=104.8
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCceeccccccc-----CCC--C--CCC---HHHHHHHHHHHHHHc------
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDS-----PHT--D--VFS---YAHLAEDVKYFLETE------ 76 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~S-----~~~--~--~~s---~~~~a~dl~~~l~~l------ 76 (256)
.-|.||+-||.+++-..|.-+++.+++.++.+...-|-+| +.. . .++ +.+...|+..+++.|
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 3466888999999999999999999998765544444332 211 0 111 223333333333322
Q ss_pred -------CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHH
Q psy1055 77 -------SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRK 149 (256)
Q Consensus 77 -------~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (256)
...++-++|||+||+.+++++.-+.+....+.- ...-....... .....+.
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~------------------C~~~~~~~~~~----~~~~~~~ 207 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQH------------------CESASRICLDP----PGLNGRL 207 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHH------------------hhhhhhcccCC----CCcChhh
Confidence 335799999999999999988655432111110 00000000000 0000000
Q ss_pred HHHHHHHhhccCCCCceeeeeChHHHHHhhh--hhc-cCCCCCCCCCCCCCeeEEecCCCCCccCCC-hhHHhhcCCCC-
Q psy1055 150 IVDKALATAVDLKGKQIIWQCNLDSLQTQFF--NHM-INFPQPGEKTYGGPTLFIGGGRSDFIRQED-HPGIKSLFPRA- 224 (256)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~- 224 (256)
+.+.....+. ...+.++ ...++..+. ... ..+-.-....++.|++++.|..|.+.|.+. .......+|+.
T Consensus 208 -l~q~~av~~~--~~~~~~r--DpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~ 282 (365)
T COG4188 208 -LNQCAAVWLP--RQAYDLR--DPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGAL 282 (365)
T ss_pred -hccccccccc--hhhhccc--cccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccCCcch
Confidence 0000000000 0000000 000000000 000 001111233788999999999998766543 44556667777
Q ss_pred -eEEEecCCCccccccCchHH
Q psy1055 225 -EITYIEDAGHWVHSQKPDLF 244 (256)
Q Consensus 225 -~~~~i~~~GH~~~~e~p~~~ 244 (256)
-+.+++++.|+..+|-++++
T Consensus 283 k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 283 KYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred hheeecCCCccccccccCccc
Confidence 57899999999999998885
No 137
>PLN02606 palmitoyl-protein thioesterase
Probab=98.35 E-value=8.6e-05 Score=61.09 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=62.3
Q ss_pred CCCCEEEEcCCc--cchhcHHHHHHHHHhh-cC--ceecccccccCCCCC-CCHHHHHHHHHHHHHH---cCCCceeEEe
Q psy1055 15 DTKPIIIMHGLL--GSKNNWNSLAKAIHRK-TK--KKIARNHGDSPHTDV-FSYAHLAEDVKYFLET---ESIAQADVLG 85 (256)
Q Consensus 15 ~~~~iv~lHG~~--~~~~~w~~~~~~l~~~-~~--~~v~~ghG~S~~~~~-~s~~~~a~dl~~~l~~---l~~~~~~lvG 85 (256)
+..|||+.||.+ .+...+..+.+.+.+. +. .+|.-|-+. ...- .+..+.++.+.+-+.. +. +-+++||
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~~~--~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naIG 101 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGNGV--QDSLFMPLRQQASIACEKIKQMKELS-EGYNIVA 101 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECCCc--ccccccCHHHHHHHHHHHHhcchhhc-CceEEEE
Confidence 467999999999 5555778888888532 11 223322121 0111 2344444444444433 22 2499999
Q ss_pred eChhHHHHHHHHHhCCC--CcccEEEEeC
Q psy1055 86 HSMGGRAMMYLALANPH--LVSSLIVVDI 112 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~--~v~~lil~~~ 112 (256)
+|-||.++-.++.+.|+ .|+.+|-+++
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 99999999999999987 5999998874
No 138
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.34 E-value=5.1e-06 Score=67.40 Aligned_cols=101 Identities=20% Similarity=0.146 Sum_probs=69.1
Q ss_pred CCC-CCEEEEcCCccchhcHHHHH--HHHHhhc-Cceecc-cccccC---------CC-----CCCCHHHHHHHHHHHHH
Q psy1055 14 PDT-KPIIIMHGLLGSKNNWNSLA--KAIHRKT-KKKIAR-NHGDSP---------HT-----DVFSYAHLAEDVKYFLE 74 (256)
Q Consensus 14 ~~~-~~iv~lHG~~~~~~~w~~~~--~~l~~~~-~~~v~~-ghG~S~---------~~-----~~~s~~~~a~dl~~~l~ 74 (256)
+++ |-||+|||..++..-.+... ++|++.. +.+++| |+.++- .+ .......+.+-+..++.
T Consensus 58 ~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~ 137 (312)
T COG3509 58 PSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVN 137 (312)
T ss_pred CCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHH
Confidence 344 45777999998765444433 4555443 333443 443321 11 11235567777777778
Q ss_pred HcCCC--ceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 75 TESIA--QADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 75 ~l~~~--~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
+.+++ ++++.|-|-||..+..++..+|+.+.++.++....
T Consensus 138 ~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 138 EYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred hcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 88887 79999999999999999999999999999886543
No 139
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.33 E-value=8e-07 Score=76.49 Aligned_cols=100 Identities=17% Similarity=0.289 Sum_probs=56.9
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---cc-cccc--------c---CC-------C------C----C--
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---AR-NHGD--------S---PH-------T------D----V-- 59 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~-ghG~--------S---~~-------~------~----~-- 59 (256)
++-|.|||-||++++......++..|+.+++.|+ .| |-+- . .. . . .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 4457799999999999999999999999987665 22 2110 0 00 0 0 0
Q ss_pred CC-----HHHHHHHHHHHHHHc--------------------------CCCceeEEeeChhHHHHHHHHHhCCCCcccEE
Q psy1055 60 FS-----YAHLAEDVKYFLETE--------------------------SIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108 (256)
Q Consensus 60 ~s-----~~~~a~dl~~~l~~l--------------------------~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~li 108 (256)
+. ++..++++..+++.+ +.+++.++|||+||+.+...+.+- .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 00 122344444444332 235689999999999999877666 6799999
Q ss_pred EEeCCC
Q psy1055 109 VVDISP 114 (256)
Q Consensus 109 l~~~~~ 114 (256)
++|+..
T Consensus 257 ~LD~W~ 262 (379)
T PF03403_consen 257 LLDPWM 262 (379)
T ss_dssp EES---
T ss_pred EeCCcc
Confidence 999543
No 140
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.29 E-value=1.2e-05 Score=66.31 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=61.4
Q ss_pred CCCCEEEEcCCccch-hcHHHH---------HHHHHhhcCcee---cccccccCCCCCCCHHH---HHHHHHHHHHHcCC
Q psy1055 15 DTKPIIIMHGLLGSK-NNWNSL---------AKAIHRKTKKKI---ARNHGDSPHTDVFSYAH---LAEDVKYFLETESI 78 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~-~~w~~~---------~~~l~~~~~~~v---~~ghG~S~~~~~~s~~~---~a~dl~~~l~~l~~ 78 (256)
.-|.||..|+.+.+. ..+... ...+.++++.+| .||.|.|.......... =..|+++++.+...
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpw 98 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPW 98 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTT
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCC
Confidence 345677788888643 222221 112777777665 89999997654331222 33355555555454
Q ss_pred --CceeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 79 --AQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 79 --~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
.++-.+|.|++|.+++.+|...|..+++++...
T Consensus 99 s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~ 133 (272)
T PF02129_consen 99 SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQS 133 (272)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEES
T ss_pred CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecc
Confidence 379999999999999999999999999999864
No 141
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.29 E-value=2.6e-06 Score=69.23 Aligned_cols=49 Identities=33% Similarity=0.631 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHc-CCCc--eeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 63 AHLAEDVKYFLETE-SIAQ--ADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 63 ~~~a~dl~~~l~~l-~~~~--~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
+.+.++|..+|++. .+.+ -.|+|+||||+.|+.+|.+||+.+.+++.++
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S 147 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFS 147 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEES
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccC
Confidence 45777888888665 4332 5899999999999999999999999999975
No 142
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.19 E-value=4.8e-06 Score=67.00 Aligned_cols=98 Identities=19% Similarity=0.213 Sum_probs=56.0
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC---cee---cccccccCC-CC-CCCHHHHHHHHHHHHHH----cCCCce
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK---KKI---ARNHGDSPH-TD-VFSYAHLAEDVKYFLET----ESIAQA 81 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~---~~v---~~ghG~S~~-~~-~~s~~~~a~dl~~~l~~----l~~~~~ 81 (256)
+++..+||+||+..+...--.-+..+..... .+| .|..|.-.. .. ..+...-+..+..+++. .+.+++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4677899999999885443332333333221 223 465553211 11 11233344445555544 467899
Q ss_pred eEEeeChhHHHHHHHHH----hCC-----CCcccEEEEe
Q psy1055 82 DVLGHSMGGRAMMYLAL----ANP-----HLVSSLIVVD 111 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~----~~P-----~~v~~lil~~ 111 (256)
+|++||||+.+.+.... ..+ .++..++|++
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 99999999999987533 222 2566777754
No 143
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.15 E-value=2.8e-05 Score=67.81 Aligned_cols=98 Identities=11% Similarity=0.183 Sum_probs=61.3
Q ss_pred CCCCEEEEcCCccchhc-HHHHHHHHHhhcCc---e-e-cccccccCCCCCCC-----HHHHHHHHHHHHHHc-----CC
Q psy1055 15 DTKPIIIMHGLLGSKNN-WNSLAKAIHRKTKK---K-I-ARNHGDSPHTDVFS-----YAHLAEDVKYFLETE-----SI 78 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~-w~~~~~~l~~~~~~---~-v-~~ghG~S~~~~~~s-----~~~~a~dl~~~l~~l-----~~ 78 (256)
..|.|+|+||..-.... -...++.|.+.+.. + | ..+.+...+..+++ .+.++++|.-++++. +-
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 34667789986422111 12344555544432 2 2 33322222222222 345678888888775 22
Q ss_pred CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 79 AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
++..|+|+||||+.|+.+|++||+++.+++...+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEecc
Confidence 4578999999999999999999999999998753
No 144
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.14 E-value=0.00013 Score=59.00 Aligned_cols=220 Identities=13% Similarity=0.118 Sum_probs=110.6
Q ss_pred CEEEEcCCccch-hcHHHHHHHHHhhcCcee-cccccccCCCCCCCHHHHHHHHHHHHHHcCCC---ceeEEeeChhHHH
Q psy1055 18 PIIIMHGLLGSK-NNWNSLAKAIHRKTKKKI-ARNHGDSPHTDVFSYAHLAEDVKYFLETESIA---QADVLGHSMGGRA 92 (256)
Q Consensus 18 ~iv~lHG~~~~~-~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~---~~~lvGhS~Gg~i 92 (256)
|+|+|=||.+.. ..-..+++...+.+..++ ....-..--.+.-.+...++.+.+.+....-+ ++.+-..|.||..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~ 80 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSF 80 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHH
Confidence 788899998654 334555555555444443 21111110001124566677777777766544 7888899998877
Q ss_pred HHHHHH-----hC--C---CCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccCC
Q psy1055 93 MMYLAL-----AN--P---HLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLK 162 (256)
Q Consensus 93 a~~~A~-----~~--P---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (256)
.+..-. .. . .+++++| .|++|..... ......+...+.......+ ..........+...+....- .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~i~g~I-~DS~P~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~ 156 (240)
T PF05705_consen 81 LYSQLLEAYQSRKKFGKLLPRIKGII-FDSCPGIPTY-SSSARAFSAALPKSSPRWF-VPLWPLLQFLLRLSIISYFI-F 156 (240)
T ss_pred HHHHHHHHHHhcccccccccccceeE-EeCCCCcccc-ccHHHHHHHHcCccchhhH-HHHHHHHHHHHHHHHHHHHH-h
Confidence 654322 11 1 2266666 6877753222 1112222112211100000 00000001011100000000 0
Q ss_pred CCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcC----CCCeEEEecCCCccccc
Q psy1055 163 GKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF----PRAEITYIEDAGHWVHS 238 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~GH~~~~ 238 (256)
. ...........+. .. .....++|-|.|.++.|.+++.+..+...+.. -.++...++++.|..|+
T Consensus 157 ~----~~~~~~~~~~~~~-~~------~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~ 225 (240)
T PF05705_consen 157 G----YPDVQEYYRRALN-DF------ANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHL 225 (240)
T ss_pred c----CCcHHHHHHHHHh-hh------hcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhc
Confidence 0 0000011111111 11 11145689999999999999987666543332 23677889999999977
Q ss_pred c-CchHHHHHHHHHH
Q psy1055 239 Q-KPDLFVDKVVDFY 252 (256)
Q Consensus 239 e-~p~~~~~~i~~fl 252 (256)
. +|++..+.|.+|+
T Consensus 226 r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 226 RKHPDRYWRAVDEFW 240 (240)
T ss_pred ccCHHHHHHHHHhhC
Confidence 6 6999999999984
No 145
>KOG3724|consensus
Probab=98.08 E-value=1.8e-05 Score=71.81 Aligned_cols=100 Identities=18% Similarity=0.152 Sum_probs=55.3
Q ss_pred CCCCCCCEEEEcCCccchhcHHHHHHHHHhhcCc----e-e---cccccc--c-CCCC------CCCHHHHHHHHHHHH-
Q psy1055 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKK----K-I---ARNHGD--S-PHTD------VFSYAHLAEDVKYFL- 73 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~----~-v---~~ghG~--S-~~~~------~~s~~~~a~dl~~~l- 73 (256)
.+.+|.||+||+|..|+...=+.++......|+. - . .+++=+ + +-.. ..++.+.++-+..-|
T Consensus 85 lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk 164 (973)
T KOG3724|consen 85 LELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAIK 164 (973)
T ss_pred ccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHHH
Confidence 5677999999999999977766666655532110 0 0 111100 0 0011 123444333333322
Q ss_pred ---HHcCC---------CceeEEeeChhHHHHHHHHHh---CCCCcccEEEEe
Q psy1055 74 ---ETESI---------AQADVLGHSMGGRAMMYLALA---NPHLVSSLIVVD 111 (256)
Q Consensus 74 ---~~l~~---------~~~~lvGhS~Gg~ia~~~A~~---~P~~v~~lil~~ 111 (256)
+.... ..++||||||||+||.+++.. .++.|+-++...
T Consensus 165 ~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 165 YILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 22221 138999999999999877652 355566666554
No 146
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.06 E-value=9.1e-05 Score=63.07 Aligned_cols=158 Identities=15% Similarity=0.221 Sum_probs=94.8
Q ss_pred HHHHHHHHHHc---CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHH-hcCcccccC
Q psy1055 66 AEDVKYFLETE---SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMK-SVNLDELSG 141 (256)
Q Consensus 66 a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 141 (256)
.+-+.+++++. .++++++.|.|==|..+...|+ -.+||++++-+-..- ......+....+..- .+.+
T Consensus 156 MD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~---LN~~~~l~h~y~~yG~~ws~----- 226 (367)
T PF10142_consen 156 MDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDV---LNMKANLEHQYRSYGGNWSF----- 226 (367)
T ss_pred HHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEcc---CCcHHHHHHHHHHhCCCCcc-----
Confidence 34455677666 7899999999999999999988 667999998542111 111112222222221 1100
Q ss_pred CChHHHHHHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCC-CCCCCCeeEEecCCCCCccCCChhHHhhc
Q psy1055 142 QPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGE-KTYGGPTLFIGGGRSDFIRQEDHPGIKSL 220 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 220 (256)
....-..+.+...++. +...+.. +.+ ..... .+++.|.+||.|..|+++.++....+-+.
T Consensus 227 ----a~~dY~~~gi~~~l~t-----------p~f~~L~-~iv---DP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~ 287 (367)
T PF10142_consen 227 ----AFQDYYNEGITQQLDT-----------PEFDKLM-QIV---DPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDK 287 (367)
T ss_pred ----chhhhhHhCchhhcCC-----------HHHHHHH-Hhc---CHHHHHHhcCccEEEEecCCCceeccCchHHHHhh
Confidence 0000011111111110 1111100 000 00011 16689999999999999999998888888
Q ss_pred CCC-CeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 221 FPR-AEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 221 ~~~-~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
+|+ ..++++||++|..-. ..+.+.|..|+..
T Consensus 288 L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 288 LPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred CCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 886 468999999999977 6777888888865
No 147
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.06 E-value=9.3e-06 Score=56.65 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=54.5
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
..|+|+|.++.|+..|.+.++.+++.+++++++.+++.||..+...-.-+.++|.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999999999975557778999999864
No 148
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.03 E-value=3.7e-05 Score=63.83 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=59.8
Q ss_pred CCCCCCCCEEEEcCCccchhcH------HHHHHHHHhhc--Ccee--cccccccCCCCCCCHHHHHHHHHHHHHHc----
Q psy1055 11 PVDPDTKPIIIMHGLLGSKNNW------NSLAKAIHRKT--KKKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETE---- 76 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~~w------~~~~~~l~~~~--~~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l---- 76 (256)
|....+++||++-|.+...+.- +.....+++.. +.++ +||.|.|.... +.++++.|-.+.++.|
T Consensus 132 ~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--s~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--SRKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--CHHHHHHHHHHHHHHHHhcc
Confidence 4446678999999998876551 12233333322 2333 89999995543 5677777777776666
Q ss_pred -CC--CceeEEeeChhHHHHHHHHHhCC
Q psy1055 77 -SI--AQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 77 -~~--~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
|+ +++++-|||+||.|+.+...+++
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhcc
Confidence 22 57889999999999987554443
No 149
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.03 E-value=3e-05 Score=62.91 Aligned_cols=95 Identities=18% Similarity=0.220 Sum_probs=59.3
Q ss_pred CCEEEEcCCccchhcHHH-HHHHH------HhhcCcee-ccccc----ccCCCCCCCHHHHHHHHH-HHHHHcCCC--ce
Q psy1055 17 KPIIIMHGLLGSKNNWNS-LAKAI------HRKTKKKI-ARNHG----DSPHTDVFSYAHLAEDVK-YFLETESIA--QA 81 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~-~~~~l------~~~~~~~v-~~ghG----~S~~~~~~s~~~~a~dl~-~~l~~l~~~--~~ 81 (256)
|-+||+||.+.....=+. +..-+ ...+.|.| .|.+- .++...........+-+. .+.++.+++ ++
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRI 271 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRI 271 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcccceE
Confidence 678899999875443222 22111 11122233 33322 233222222344555555 355666775 69
Q ss_pred eEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 82 DVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
+++|.|+||+-++.++.++|+.+.+.+++.
T Consensus 272 YviGlSrG~~gt~al~~kfPdfFAaa~~ia 301 (387)
T COG4099 272 YVIGLSRGGFGTWALAEKFPDFFAAAVPIA 301 (387)
T ss_pred EEEeecCcchhhHHHHHhCchhhheeeeec
Confidence 999999999999999999999999999875
No 150
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.01 E-value=0.00023 Score=62.19 Aligned_cols=99 Identities=23% Similarity=0.362 Sum_probs=62.9
Q ss_pred CCCCCCCCEEEE-----cCC--ccchhcHHHHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHHHc-----CC
Q psy1055 11 PVDPDTKPIIIM-----HGL--LGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETE-----SI 78 (256)
Q Consensus 11 ~~~~~~~~iv~l-----HG~--~~~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l-----~~ 78 (256)
+.++.++|+|.+ ||- ++-+. =..+--.|.. ++-|.+-++= ..+.+..|+++.+....+|+++. +.
T Consensus 63 ~~d~~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~~-GHPvYFV~F~-p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 63 PVDPTKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALRA-GHPVYFVGFF-PEPEPGQTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCCCCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHHc-CCCeEEEEec-CCCCCCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 466778887776 432 33222 1234444554 2222111111 11223357888777777777665 23
Q ss_pred CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 79 AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
.|.+|||...||+.++.+|+.+|+.+..+|+-++
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGa 173 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGA 173 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcCccCceeecCC
Confidence 4899999999999999999999999999998653
No 151
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.01 E-value=3e-05 Score=67.24 Aligned_cols=87 Identities=14% Similarity=0.147 Sum_probs=57.6
Q ss_pred cHHHHHHHHHhhcCce-e-cccccccCCCCCCCHHHHHHHHHHHHHHc---CCCceeEEeeChhHHHHHHHHHhCCC---
Q psy1055 31 NWNSLAKAIHRKTKKK-I-ARNHGDSPHTDVFSYAHLAEDVKYFLETE---SIAQADVLGHSMGGRAMMYLALANPH--- 102 (256)
Q Consensus 31 ~w~~~~~~l~~~~~~~-v-~~ghG~S~~~~~~s~~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~A~~~P~--- 102 (256)
.|..+++.|.+.++.. . +++.+---+......+.+...|..++++. ...+++||||||||.++..+-...+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W 145 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEW 145 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhh
Confidence 7999999998765432 2 45543221111112345666666666554 35789999999999999988877643
Q ss_pred ---CcccEEEEeCCCCCC
Q psy1055 103 ---LVSSLIVVDISPVGV 117 (256)
Q Consensus 103 ---~v~~lil~~~~~~~~ 117 (256)
.|+++|.++++..|.
T Consensus 146 ~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 146 KDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhhhhEEEEeCCCCCCC
Confidence 599999997543343
No 152
>COG3150 Predicted esterase [General function prediction only]
Probab=97.99 E-value=4.9e-05 Score=56.53 Aligned_cols=84 Identities=14% Similarity=0.230 Sum_probs=62.7
Q ss_pred EEEEcCCccchhcHHHHH--HHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHH
Q psy1055 19 IIIMHGLLGSKNNWNSLA--KAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYL 96 (256)
Q Consensus 19 iv~lHG~~~~~~~w~~~~--~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 96 (256)
|+.||||-+|..+...+. ..+.+. .|-++-|...........++.|..++++++-....|||-|+||+.|..+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-----~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l 76 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-----VRDIEYSTPHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWL 76 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-----ccceeeecCCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHH
Confidence 899999999887776432 223332 2333334444445688899999999999997779999999999999999
Q ss_pred HHhCCCCcccEEE
Q psy1055 97 ALANPHLVSSLIV 109 (256)
Q Consensus 97 A~~~P~~v~~lil 109 (256)
+.++- ++++++
T Consensus 77 ~~~~G--irav~~ 87 (191)
T COG3150 77 GFLCG--IRAVVF 87 (191)
T ss_pred HHHhC--Chhhhc
Confidence 99884 666664
No 153
>KOG2100|consensus
Probab=97.90 E-value=0.00018 Score=67.40 Aligned_cols=193 Identities=19% Similarity=0.250 Sum_probs=108.1
Q ss_pred CCCCC-EEEEcCCccch-------hcHHHHHHHHHhhcCcee---cccccccCC---------CCCCCHHHHHHHHHHHH
Q psy1055 14 PDTKP-IIIMHGLLGSK-------NNWNSLAKAIHRKTKKKI---ARNHGDSPH---------TDVFSYAHLAEDVKYFL 73 (256)
Q Consensus 14 ~~~~~-iv~lHG~~~~~-------~~w~~~~~~l~~~~~~~v---~~ghG~S~~---------~~~~s~~~~a~dl~~~l 73 (256)
.+..| +|.+||.+++. -.|..+ .....+..++ .||-|.... -+...+++...-+..++
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~ 600 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVL 600 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHH
Confidence 34445 55588998632 235444 2333333333 455443221 12345777887788888
Q ss_pred HHcCC--CceeEEeeChhHHHHHHHHHhCCCCcccE-EEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHH
Q psy1055 74 ETESI--AQADVLGHSMGGRAMMYLALANPHLVSSL-IVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKI 150 (256)
Q Consensus 74 ~~l~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~l-il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
+..-+ +++.+.|+|.||++++.+....|+.+.+. +.++ |+..-.. ... ..+ ++
T Consensus 601 ~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvava--PVtd~~~---------------yds--~~t-er---- 656 (755)
T KOG2100|consen 601 KLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVA--PVTDWLY---------------YDS--TYT-ER---- 656 (755)
T ss_pred hcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEec--ceeeeee---------------ecc--ccc-Hh----
Confidence 77755 46999999999999999999999777776 5543 4311000 000 000 00
Q ss_pred HHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCe-eEEecCCCCCccCCChhHHhhc-----CCCC
Q psy1055 151 VDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPT-LFIGGGRSDFIRQEDHPGIKSL-----FPRA 224 (256)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-lii~G~~D~~~~~~~~~~~~~~-----~~~~ 224 (256)
+ ..... .+.....+ . . +......++.|. |+|+|+.|+-+..+.+..+.+. ++ .
T Consensus 657 ----y---mg~p~------~~~~~y~e----~-~--~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~-~ 715 (755)
T KOG2100|consen 657 ----Y---MGLPS------ENDKGYEE----S-S--VSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP-F 715 (755)
T ss_pred ----h---cCCCc------cccchhhh----c-c--ccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc-e
Confidence 0 00000 00000000 0 0 000111344455 9999999999987665554433 24 7
Q ss_pred eEEEecCCCccccccCc-hHHHHHHHHHHh
Q psy1055 225 EITYIEDAGHWVHSQKP-DLFVDKVVDFYR 253 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~p-~~~~~~i~~fl~ 253 (256)
++.++|+..|.+..-.+ ..+...+..|+.
T Consensus 716 ~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 716 RLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred EEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 89999999999976553 556666777765
No 154
>KOG2112|consensus
Probab=97.84 E-value=5.6e-05 Score=58.39 Aligned_cols=169 Identities=22% Similarity=0.292 Sum_probs=103.7
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCceec-----------cccccc---------CC--CCCCCHHHHHHHHHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA-----------RNHGDS---------PH--TDVFSYAHLAEDVKYFL 73 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~-----------~ghG~S---------~~--~~~~s~~~~a~dl~~~l 73 (256)
...||++||.+.+...|.+++..|.-..-..|+ -|.+.. .. ....++...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 357999999999999998877776533211221 122111 11 11134567777788888
Q ss_pred HHc---CC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHH
Q psy1055 74 ETE---SI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVR 148 (256)
Q Consensus 74 ~~l---~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (256)
++. |+ +++.+-|.||||+++++.+..+|..+.+.+-.. +..+ . .
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s----~~~p------------------~--------~- 131 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALS----GFLP------------------R--------A- 131 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccc----cccc------------------c--------c-
Confidence 765 54 468889999999999999999987766665321 1000 0 0
Q ss_pred HHHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHH----hhcCCCC
Q psy1055 149 KIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGI----KSLFPRA 224 (256)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~----~~~~~~~ 224 (256)
...+..... . + + ..|.+..+|+.|+++|....+.. +.....+
T Consensus 132 ---~~~~~~~~~---~---~------------------------~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~ 177 (206)
T KOG2112|consen 132 ---SIGLPGWLP---G---V------------------------N-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRV 177 (206)
T ss_pred ---hhhccCCcc---c---c------------------------C-cchhheecccCCceeehHHHHHHHHHHHHcCCce
Confidence 000000000 0 0 0 34899999999999998665443 3333347
Q ss_pred eEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 225 ~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
+++.+++-+|...-+.= +.+..|+.
T Consensus 178 ~f~~y~g~~h~~~~~e~----~~~~~~~~ 202 (206)
T KOG2112|consen 178 TFKPYPGLGHSTSPQEL----DDLKSWIK 202 (206)
T ss_pred eeeecCCccccccHHHH----HHHHHHHH
Confidence 88999999998864433 34445554
No 155
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.84 E-value=7.2e-05 Score=62.53 Aligned_cols=97 Identities=16% Similarity=0.301 Sum_probs=57.0
Q ss_pred CCCCCEEEEcCCccchhc-HHHHHHHHHhhcCc--ee---cccccc-----cCCC-CCCCHHHHHHHHHHHHHHcCCCce
Q psy1055 14 PDTKPIIIMHGLLGSKNN-WNSLAKAIHRKTKK--KI---ARNHGD-----SPHT-DVFSYAHLAEDVKYFLETESIAQA 81 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~-w~~~~~~l~~~~~~--~v---~~ghG~-----S~~~-~~~s~~~~a~dl~~~l~~l~~~~~ 81 (256)
..+..+||+||+.-+-.. =...++...+.... +| .|--|. .++. ..|+-+.++.-|-.+.+....+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 456789999999865322 12234444433322 22 333332 1221 235556666666666666678899
Q ss_pred eEEeeChhHHHHHHH----HHhCC----CCcccEEEE
Q psy1055 82 DVLGHSMGGRAMMYL----ALANP----HLVSSLIVV 110 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~----A~~~P----~~v~~lil~ 110 (256)
+|++||||.++++.. +.+.+ .+++-+||.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLA 230 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILA 230 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEee
Confidence 999999999999764 44333 356666663
No 156
>KOG3253|consensus
Probab=97.83 E-value=0.00019 Score=63.54 Aligned_cols=175 Identities=15% Similarity=0.147 Sum_probs=102.4
Q ss_pred CCCCEEEEcCCc----cchhcHHHHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHH--------HcCCCcee
Q psy1055 15 DTKPIIIMHGLL----GSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLE--------TESIAQAD 82 (256)
Q Consensus 15 ~~~~iv~lHG~~----~~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~--------~l~~~~~~ 82 (256)
..|.++++||.+ ++..+|. +-..|+-.+.++-..-|-........++..-++-++.|.. ++...+++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~-wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~Ii 253 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWS-WQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPII 253 (784)
T ss_pred CCceEEeccCCCCCCccchHHHh-HHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceE
Confidence 356688999998 2333332 2233333322221111100000111355555555555554 34556899
Q ss_pred EEeeChhHHHHHHHHHhC-CCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHHHHHhhccC
Q psy1055 83 VLGHSMGGRAMMYLALAN-PHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDL 161 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~-P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (256)
|+|.|||+.+++..+... -.-|+++|+++-+..... . . + .+.
T Consensus 254 LvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vd-------------------g-----p---r---------gir- 296 (784)
T KOG3253|consen 254 LVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVD-------------------G-----P---R---------GIR- 296 (784)
T ss_pred EEecccCceeeEEeccccCCceEEEEEEecccccCCC-------------------c-----c---c---------CCc-
Confidence 999999999888877644 345888888752110000 0 0 0 000
Q ss_pred CCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCC-CCeEEEecCCCccccccC
Q psy1055 162 KGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFP-RAEITYIEDAGHWVHSQK 240 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~ 240 (256)
+ +.+ ..++.|+||+-|..|..++++.++.+++.+. ..++++|.+++|..-+-.
T Consensus 297 ---------D-E~L----------------ldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 297 ---------D-EAL----------------LDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred ---------c-hhh----------------HhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCc
Confidence 0 110 1456799999999999999999999888764 678999999999985543
Q ss_pred ---------chHHHHHHHHHHh
Q psy1055 241 ---------PDLFVDKVVDFYR 253 (256)
Q Consensus 241 ---------p~~~~~~i~~fl~ 253 (256)
..++...+.++|.
T Consensus 351 ~k~esegltqseVd~~i~~aI~ 372 (784)
T KOG3253|consen 351 RKVESEGLTQSEVDSAIAQAIK 372 (784)
T ss_pred cccccccccHHHHHHHHHHHHH
Confidence 4555555555544
No 157
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.79 E-value=0.00025 Score=58.47 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=60.9
Q ss_pred CCCCCEEEEcCCccchhc--HHHHHHHHHhh---cCceecccccccCCCC-CCCHHHHHHHHHHHHHH---cCCCceeEE
Q psy1055 14 PDTKPIIIMHGLLGSKNN--WNSLAKAIHRK---TKKKIARNHGDSPHTD-VFSYAHLAEDVKYFLET---ESIAQADVL 84 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~--w~~~~~~l~~~---~~~~v~~ghG~S~~~~-~~s~~~~a~dl~~~l~~---l~~~~~~lv 84 (256)
....|+|+.||.|.+... -..+.+.+.+. +..+|.- |.+.... -.+..+.++.+.+-+.. +. +-+++|
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i--g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naI 99 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI--GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIV 99 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE--CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEE
Confidence 456799999999986553 34455555332 1122322 3332111 12455555555554444 22 249999
Q ss_pred eeChhHHHHHHHHHhCCC--CcccEEEEeC
Q psy1055 85 GHSMGGRAMMYLALANPH--LVSSLIVVDI 112 (256)
Q Consensus 85 GhS~Gg~ia~~~A~~~P~--~v~~lil~~~ 112 (256)
|+|-||.++-.++.+.|+ .|+.+|-+++
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 999999999999999997 5999998874
No 158
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.79 E-value=5.8e-05 Score=56.62 Aligned_cols=51 Identities=22% Similarity=0.161 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHc----CCCceeEEeeChhHHHHHHHHHhCCC----CcccEEEEeC
Q psy1055 62 YAHLAEDVKYFLETE----SIAQADVLGHSMGGRAMMYLALANPH----LVSSLIVVDI 112 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~P~----~v~~lil~~~ 112 (256)
+..+.+.+...+++. ...+++++|||+||.+|..+|...++ .+..++..++
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 344555555555544 56789999999999999999887755 4556666654
No 159
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.77 E-value=6.4e-05 Score=63.65 Aligned_cols=96 Identities=19% Similarity=0.314 Sum_probs=53.2
Q ss_pred CCCCEEEEcCCccchhc--------------H----HHHHHHHHhhcCcee---cccccccCCCC------CCCHHHH--
Q psy1055 15 DTKPIIIMHGLLGSKNN--------------W----NSLAKAIHRKTKKKI---ARNHGDSPHTD------VFSYAHL-- 65 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~--------------w----~~~~~~l~~~~~~~v---~~ghG~S~~~~------~~s~~~~-- 65 (256)
.-|.||++||-+++... | ..++..|+++++.++ .+|.|+..... .++.+.+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 34579999998765422 1 235778998887665 77888653311 1222222
Q ss_pred -------------HHHHHH---HHHHc---CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 66 -------------AEDVKY---FLETE---SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 66 -------------a~dl~~---~l~~l---~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
+-|... +++.+ +-+++-++|+||||..++.+|+.-+ +|++.|.++
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhh
Confidence 222233 33333 2247999999999999999999877 587777653
No 160
>KOG3847|consensus
Probab=97.74 E-value=2.9e-05 Score=63.41 Aligned_cols=102 Identities=20% Similarity=0.302 Sum_probs=63.9
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHHhhcCcee---ccccccc------CC--CC---------------C--C----
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDS------PH--TD---------------V--F---- 60 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S------~~--~~---------------~--~---- 60 (256)
+++-|.+||-||++++...+..+.-.|+.+++++. .|.+..+ +. .+ + +
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 34457799999999999999999999998876554 3433211 00 00 0 0
Q ss_pred -CHHHHHHH---HHHHHHHc------------------------CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 61 -SYAHLAED---VKYFLETE------------------------SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 61 -s~~~~a~d---l~~~l~~l------------------------~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
..-.-+++ ...+++++ .-+++.++|||+||+.+......+-+ ++..|+.|+
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeee
Confidence 01111222 22233332 11358899999999999877766654 888888886
Q ss_pred CCC
Q psy1055 113 SPV 115 (256)
Q Consensus 113 ~~~ 115 (256)
...
T Consensus 274 WM~ 276 (399)
T KOG3847|consen 274 WMF 276 (399)
T ss_pred eec
Confidence 543
No 161
>KOG2281|consensus
Probab=97.73 E-value=0.00037 Score=62.27 Aligned_cols=198 Identities=14% Similarity=0.150 Sum_probs=117.1
Q ss_pred CCCEEEEcCCcc-----chhcHHHHH--HHHHhhcCcee-cccccccCC-----------CCCCCHHHHHHHHHHHHHHc
Q psy1055 16 TKPIIIMHGLLG-----SKNNWNSLA--KAIHRKTKKKI-ARNHGDSPH-----------TDVFSYAHLAEDVKYFLETE 76 (256)
Q Consensus 16 ~~~iv~lHG~~~-----~~~~w~~~~--~~l~~~~~~~v-~~ghG~S~~-----------~~~~s~~~~a~dl~~~l~~l 76 (256)
-|+++++=|.++ |...|-.++ ..|+..+++++ +.+.|.--+ .+...+++.++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 678899999986 333344443 35676666665 555553211 12245789999999999998
Q ss_pred C---CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHHHHHH
Q psy1055 77 S---IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDK 153 (256)
Q Consensus 77 ~---~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
| .+++.+-|+|.||++++..-.+||+-++..|- .+|+.. ++.+ +. +.+ +++
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA--GapVT~---W~~Y------------DT--gYT-ERY------ 775 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA--GAPVTD---WRLY------------DT--GYT-ERY------ 775 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEec--cCccee---eeee------------cc--cch-hhh------
Confidence 5 47899999999999999999999997776663 234321 1010 00 000 000
Q ss_pred HHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhH-H---hhcCCCCeEEEe
Q psy1055 154 ALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPG-I---KSLFPRAEITYI 229 (256)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~-~---~~~~~~~~~~~i 229 (256)
+.-- +.+...+.. ..+.- ....+| .-.-..|+++|--|.-+.-..... + -++-+.-++.++
T Consensus 776 -Mg~P-~~nE~gY~a----gSV~~----~Veklp-----depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~If 840 (867)
T KOG2281|consen 776 -MGYP-DNNEHGYGA----GSVAG----HVEKLP-----DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIF 840 (867)
T ss_pred -cCCC-ccchhcccc----hhHHH----HHhhCC-----CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEc
Confidence 0000 000000111 11111 122233 123368999998887554333222 2 233344689999
Q ss_pred cCCCccc-cccCchHHHHHHHHHHhh
Q psy1055 230 EDAGHWV-HSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 230 ~~~GH~~-~~e~p~~~~~~i~~fl~~ 254 (256)
|+-.|.+ ..|.-+-....+..|+++
T Consensus 841 P~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 841 PNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cccccccCCCccchhHHHHHHHHHhh
Confidence 9999999 566677788889999876
No 162
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.71 E-value=0.00027 Score=54.23 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=64.7
Q ss_pred CEEEEcCCccchhcHHHHHHHHHhhcCcee----cccccccCCCCCCCHHHHHHHHHHHHHHc----CCCceeEEeeChh
Q psy1055 18 PIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPHTDVFSYAHLAEDVKYFLETE----SIAQADVLGHSMG 89 (256)
Q Consensus 18 ~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~~~~~s~~~~a~dl~~~l~~l----~~~~~~lvGhS~G 89 (256)
-+||+-|=++....=..+++.|++++..++ ++-+- + .-|.++.++|+.+++++. +.+++.|||.|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw-~----~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFW-S----ERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHh-h----hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 477888888766444568889998876665 33333 1 235677777777777665 6789999999999
Q ss_pred HHHHHHHHHhCC----CCcccEEEEeC
Q psy1055 90 GRAMMYLALANP----HLVSSLIVVDI 112 (256)
Q Consensus 90 g~ia~~~A~~~P----~~v~~lil~~~ 112 (256)
+-|.-....+-| ++|+.++|+..
T Consensus 79 ADvlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 79 ADVLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred chhHHHHHhhCCHHHHhheeEEEEecc
Confidence 977766655555 57888888764
No 163
>KOG1553|consensus
Probab=97.69 E-value=0.00016 Score=60.02 Aligned_cols=93 Identities=15% Similarity=0.209 Sum_probs=59.8
Q ss_pred CCCC-CEEEEcCCccchhcHHHHHHHHHhhcCcee---cccccccCCCC-CCCHHHHHHHHHHH-HHHcCC--CceeEEe
Q psy1055 14 PDTK-PIIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTD-VFSYAHLAEDVKYF-LETESI--AQADVLG 85 (256)
Q Consensus 14 ~~~~-~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~~~-~~s~~~~a~dl~~~-l~~l~~--~~~~lvG 85 (256)
+.|. -|+|.-|..+-... .-+..-+. .++.++ .||+++|...+ ..+-...++.+.++ |..|+. +.++|.|
T Consensus 240 ~ngq~LvIC~EGNAGFYEv-G~m~tP~~-lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilyg 317 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAGFYEV-GVMNTPAQ-LGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYG 317 (517)
T ss_pred CCCceEEEEecCCccceEe-eeecChHH-hCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEE
Confidence 4444 46677777654322 11122233 334455 89999997644 23333334444443 455654 6799999
Q ss_pred eChhHHHHHHHHHhCCCCcccEEE
Q psy1055 86 HSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 86 hS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
+|.||+-+..+|..||+ |+++||
T Consensus 318 WSIGGF~~~waAs~YPd-VkavvL 340 (517)
T KOG1553|consen 318 WSIGGFPVAWAASNYPD-VKAVVL 340 (517)
T ss_pred eecCCchHHHHhhcCCC-ceEEEe
Confidence 99999999999999998 999987
No 164
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.66 E-value=0.00037 Score=54.79 Aligned_cols=83 Identities=17% Similarity=0.216 Sum_probs=49.4
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMY 95 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~ 95 (256)
..-|||..|++.+...+.++. +.+.+..+++-. |.++.-|. +-.+.++++|||+|||=++|..
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yD-----------Yr~l~~d~----~~~~y~~i~lvAWSmGVw~A~~ 73 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYD-----------YRDLDFDF----DLSGYREIYLVAWSMGVWAANR 73 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEec-----------Cccccccc----ccccCceEEEEEEeHHHHHHHH
Confidence 457899999999976665442 123333333211 11111111 1125678999999999999977
Q ss_pred HHHhCCCCcccEEEEeCCCCCC
Q psy1055 96 LALANPHLVSSLIVVDISPVGV 117 (256)
Q Consensus 96 ~A~~~P~~v~~lil~~~~~~~~ 117 (256)
+-...| +++.|-|+.++.+.
T Consensus 74 ~l~~~~--~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 74 VLQGIP--FKRAIAINGTPYPI 93 (213)
T ss_pred HhccCC--cceeEEEECCCCCc
Confidence 654443 66777777666543
No 165
>COG0627 Predicted esterase [General function prediction only]
Probab=97.65 E-value=0.00017 Score=60.38 Aligned_cols=51 Identities=25% Similarity=0.449 Sum_probs=39.1
Q ss_pred CCHH-HHHHHHHHHHHHc-CC----CceeEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 60 FSYA-HLAEDVKYFLETE-SI----AQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 60 ~s~~-~~a~dl~~~l~~l-~~----~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
|.++ -+.+++-+.+++. .. ++-.++||||||.=|+.+|++||++++.+.-.
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~ 183 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSF 183 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccc
Confidence 4554 4667777566544 32 25779999999999999999999999998754
No 166
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.63 E-value=0.00037 Score=61.47 Aligned_cols=95 Identities=22% Similarity=0.344 Sum_probs=62.7
Q ss_pred CCEEEEcCCccchhc-H--HHHHHHHHhhcCce-e---cccccccCCCC--------CCCHHHHHHHHHHHHHHcC----
Q psy1055 17 KPIIIMHGLLGSKNN-W--NSLAKAIHRKTKKK-I---ARNHGDSPHTD--------VFSYAHLAEDVKYFLETES---- 77 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~-w--~~~~~~l~~~~~~~-v---~~ghG~S~~~~--------~~s~~~~a~dl~~~l~~l~---- 77 (256)
.||+|.-|.=++... | ..++-.|++.+.-. | .|-+|+|.+.. -.|.+...+|++.|++++.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 466666566555433 2 23556677665533 2 89999996432 2478888999999988763
Q ss_pred ---CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 78 ---IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 78 ---~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
-.+++++|-|.||++|..+-.+||+.|.+.+...
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASS 145 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASS 145 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecc
Confidence 1369999999999999999999999999998764
No 167
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.59 E-value=0.00015 Score=53.35 Aligned_cols=38 Identities=24% Similarity=0.344 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHh
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~ 99 (256)
.+...+.|.+++++..-.++++.|||+||.+|..+|..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 45677888888888776789999999999999988774
No 168
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.59 E-value=0.00021 Score=58.32 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCCCEEEEcCCccch---hcHHHHHHHHHhhcC-cee---cccccccC-CCCC--CCHHHHHHHHHHHHHHcC-C-Ccee
Q psy1055 15 DTKPIIIMHGLLGSK---NNWNSLAKAIHRKTK-KKI---ARNHGDSP-HTDV--FSYAHLAEDVKYFLETES-I-AQAD 82 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~---~~w~~~~~~l~~~~~-~~v---~~ghG~S~-~~~~--~s~~~~a~dl~~~l~~l~-~-~~~~ 82 (256)
+..|||+.||.+.+. ..+..+...+.+... ..| -.|-+.+. .... -+.++.++.+.+.++... + +-++
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 356999999999753 357777776666532 122 23333221 1111 245666666666666531 2 3499
Q ss_pred EEeeChhHHHHHHHHHhCCC-CcccEEEEeC
Q psy1055 83 VLGHSMGGRAMMYLALANPH-LVSSLIVVDI 112 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~P~-~v~~lil~~~ 112 (256)
+||+|-||.++-.++.++|+ .|+.+|-+++
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 99999999999999999875 6999998874
No 169
>KOG4840|consensus
Probab=97.58 E-value=0.0017 Score=50.81 Aligned_cols=88 Identities=19% Similarity=0.270 Sum_probs=62.5
Q ss_pred CCEEEEcCCccchh---cHHHHHHHHHhhcCcee-------cccccccCCCCCCCHHHHHHHHHHHHHHcCCC----cee
Q psy1055 17 KPIIIMHGLLGSKN---NWNSLAKAIHRKTKKKI-------ARNHGDSPHTDVFSYAHLAEDVKYFLETESIA----QAD 82 (256)
Q Consensus 17 ~~iv~lHG~~~~~~---~w~~~~~~l~~~~~~~v-------~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~----~~~ 82 (256)
.-||||-|++...- +-..+...|-+..+-+| +-|+|.+ |+.+-++||..++++++.. +++
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~------slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF------SLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc------cccccHHHHHHHHHHhhccCcccceE
Confidence 45889988887533 23556666776655554 3355543 6778889999999988653 699
Q ss_pred EEeeChhHHHHHHHH--HhCCCCcccEEEE
Q psy1055 83 VLGHSMGGRAMMYLA--LANPHLVSSLIVV 110 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A--~~~P~~v~~lil~ 110 (256)
|+|||-|+--.++|. ...|..+++.|+-
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlq 140 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQ 140 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHh
Confidence 999999997777665 3457778877774
No 170
>KOG2541|consensus
Probab=97.45 E-value=0.0011 Score=53.18 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=63.2
Q ss_pred CCCCCCEEEEcCCccchhc--HHHHHHHHHhhcCcee--c-cccc--ccCCCCCCCHHHHHHHHHHHHHHc-CCC-ceeE
Q psy1055 13 DPDTKPIIIMHGLLGSKNN--WNSLAKAIHRKTKKKI--A-RNHG--DSPHTDVFSYAHLAEDVKYFLETE-SIA-QADV 83 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~--w~~~~~~l~~~~~~~v--~-~ghG--~S~~~~~~s~~~~a~dl~~~l~~l-~~~-~~~l 83 (256)
..+..|+|++||.+++..+ ...+.+.+.+.....+ + -|-| .|.- ..+.+.++-+.+.+... .+. -+++
T Consensus 20 s~s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l---~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 20 SPSPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSL---MPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CcccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhh---ccHHHHHHHHHHHHhcchhccCceEE
Confidence 3444799999999987776 7777777777533333 2 2333 2211 23455555555444432 122 3999
Q ss_pred EeeChhHHHHHHHHHhCCC-CcccEEEEeC
Q psy1055 84 LGHSMGGRAMMYLALANPH-LVSSLIVVDI 112 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~~P~-~v~~lil~~~ 112 (256)
||.|-||.++-+++...|+ .|+.+|-++.
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 9999999999999986653 6888887763
No 171
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.35 E-value=0.0028 Score=51.19 Aligned_cols=50 Identities=24% Similarity=0.473 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHH-cCC--CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 63 AHLAEDVKYFLET-ESI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 63 ~~~a~dl~~~l~~-l~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
+.+.++|.-++++ ..+ ++-.++|||+||.+++..-+.+|+.+...+++.+
T Consensus 118 ~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SP 170 (264)
T COG2819 118 EFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISP 170 (264)
T ss_pred HHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecc
Confidence 4566666677776 333 4578999999999999999999999999999753
No 172
>KOG2551|consensus
Probab=97.24 E-value=0.00059 Score=53.33 Aligned_cols=59 Identities=24% Similarity=0.388 Sum_probs=49.6
Q ss_pred CCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHHhh
Q psy1055 193 TYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254 (256)
Q Consensus 193 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~ 254 (256)
.+++|+|.|.|+.|.+++...+..+.+.+++. +++...+||+++-.. .+.+.|.+|+..
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~HpggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCCccCCCch--HHHHHHHHHHHH
Confidence 67899999999999999999999999999988 555556899998776 566777777764
No 173
>KOG3101|consensus
Probab=97.24 E-value=0.0004 Score=53.83 Aligned_cols=109 Identities=21% Similarity=0.344 Sum_probs=63.6
Q ss_pred CcceeccCCCCCCCC-CCCEEEEcCCccchhcHHH--HHHHHHhhcC-cee-----cccc---cccC--C----------
Q psy1055 1 MSFKVADTETPVDPD-TKPIIIMHGLLGSKNNWNS--LAKAIHRKTK-KKI-----ARNH---GDSP--H---------- 56 (256)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~~iv~lHG~~~~~~~w~~--~~~~l~~~~~-~~v-----~~gh---G~S~--~---------- 56 (256)
|.|-|--...-.+++ .|.+.+|-|++....+|-. -....+.++. .+| .||. |+++ .
T Consensus 28 Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvn 107 (283)
T KOG3101|consen 28 MTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVN 107 (283)
T ss_pred eEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEe
Confidence 344444332323333 4556669999998777632 2333333333 334 4553 2221 0
Q ss_pred -C-CC----CC-HHHHHHHHHHHHHHc----CCCceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 57 -T-DV----FS-YAHLAEDVKYFLETE----SIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 57 -~-~~----~s-~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
+ .. |. ++-..++|.+++... ...++.|.||||||.=|+-.+++.|.+.+++-.
T Consensus 108 At~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSA 171 (283)
T KOG3101|consen 108 ATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSA 171 (283)
T ss_pred cccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceec
Confidence 0 01 21 344556666666532 334789999999999999999999998888754
No 174
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.06 E-value=0.0014 Score=52.62 Aligned_cols=33 Identities=33% Similarity=0.364 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCCCceeEEeeChhHHHHHHHHHh
Q psy1055 67 EDVKYFLETESIAQADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 67 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~ 99 (256)
..+...+++..-.++++.||||||++|..+|..
T Consensus 116 ~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 116 PELKSALKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 333344444445679999999999999988875
No 175
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.06 E-value=0.0077 Score=50.65 Aligned_cols=46 Identities=15% Similarity=0.277 Sum_probs=35.9
Q ss_pred HHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC-CCcccEEEEeC
Q psy1055 67 EDVKYFLETESIAQADVLGHSMGGRAMMYLALANP-HLVSSLIVVDI 112 (256)
Q Consensus 67 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P-~~v~~lil~~~ 112 (256)
+.+.++.++.+..+++||||+.|+..+..|....+ ..+.+||+|++
T Consensus 181 ~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 181 EAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 33444555557677999999999999998877765 46999999984
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.03 E-value=0.0025 Score=57.18 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=55.8
Q ss_pred CCCCCEEEEcCCc---cchhcHHHHHHHHHhhcC-ce-e---cc----cccccCCC---CCCCHHH---HHHHHHHHHHH
Q psy1055 14 PDTKPIIIMHGLL---GSKNNWNSLAKAIHRKTK-KK-I---AR----NHGDSPHT---DVFSYAH---LAEDVKYFLET 75 (256)
Q Consensus 14 ~~~~~iv~lHG~~---~~~~~w~~~~~~l~~~~~-~~-v---~~----ghG~S~~~---~~~s~~~---~a~dl~~~l~~ 75 (256)
...|.||+|||.+ ++...+ ....|..... .+ | +| |+..+... ..+-+.| ..+.|.+-++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 3457799999974 233222 2234443322 23 2 33 34333221 1122333 33444455566
Q ss_pred cCC--CceeEEeeChhHHHHHHHHHh--CCCCcccEEEEeC
Q psy1055 76 ESI--AQADVLGHSMGGRAMMYLALA--NPHLVSSLIVVDI 112 (256)
Q Consensus 76 l~~--~~~~lvGhS~Gg~ia~~~A~~--~P~~v~~lil~~~ 112 (256)
+|. ++++|+|+|.||..+..++.. .+.+++++|+...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg 211 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSG 211 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcC
Confidence 665 479999999999999887765 4567899888754
No 177
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.00 E-value=0.002 Score=51.42 Aligned_cols=44 Identities=25% Similarity=0.251 Sum_probs=32.7
Q ss_pred HHHHHHHHcCCCceeEEeeChhHHHHHHHHHhC----CCCcccEEEEeC
Q psy1055 68 DVKYFLETESIAQADVLGHSMGGRAMMYLALAN----PHLVSSLIVVDI 112 (256)
Q Consensus 68 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~----P~~v~~lil~~~ 112 (256)
-+..+++..+ .++++.|||.||.+|.+.|+.. .++|.+++..|+
T Consensus 74 yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 74 YLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 3344444444 3599999999999999988874 457888888884
No 178
>PLN02162 triacylglycerol lipase
Probab=96.97 E-value=0.0025 Score=55.51 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+....+.+..++++..-.++++.|||+||++|..+|+
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 4556667777787777678999999999999988764
No 179
>KOG4372|consensus
Probab=96.92 E-value=0.00075 Score=57.37 Aligned_cols=96 Identities=25% Similarity=0.356 Sum_probs=61.4
Q ss_pred CCCCC--CEEEEcCCcc-chhcHHHHHHHHHhhcCc--eeccccc----ccCCCCCCCHHHHHHHHHHHHHHcCCCceeE
Q psy1055 13 DPDTK--PIIIMHGLLG-SKNNWNSLAKAIHRKTKK--KIARNHG----DSPHTDVFSYAHLAEDVKYFLETESIAQADV 83 (256)
Q Consensus 13 ~~~~~--~iv~lHG~~~-~~~~w~~~~~~l~~~~~~--~v~~ghG----~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~l 83 (256)
.++++ -+|+.||+-+ +..+|...+.......-. ++.+|.= .+......==.+.++++.+.+....++++.+
T Consensus 75 ~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISf 154 (405)
T KOG4372|consen 75 FPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISF 154 (405)
T ss_pred cccCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeee
Confidence 34444 4889999988 788898888877765432 2344432 2211111212567778888877778999999
Q ss_pred EeeChhHHHHHHHH----HhCCCCcccEE
Q psy1055 84 LGHSMGGRAMMYLA----LANPHLVSSLI 108 (256)
Q Consensus 84 vGhS~Gg~ia~~~A----~~~P~~v~~li 108 (256)
||||+||.++..+- ..+|+.+..+.
T Consensus 155 vghSLGGLvar~AIgyly~~~~~~f~~v~ 183 (405)
T KOG4372|consen 155 VGHSLGGLVARYAIGYLYEKAPDFFSDVE 183 (405)
T ss_pred eeeecCCeeeeEEEEeecccccccccccC
Confidence 99999999884322 24455444443
No 180
>PLN00413 triacylglycerol lipase
Probab=96.88 E-value=0.0034 Score=54.82 Aligned_cols=37 Identities=19% Similarity=0.405 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+..+.+.+..++++..-.++++.|||+||++|..+|+
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3466778888888887778999999999999998874
No 181
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.85 E-value=0.011 Score=50.55 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=61.0
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcC-----ceecccccccC---C--CCCCCHHHHHHHHHHHHHHcCCCceeEE
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-----KKIARNHGDSP---H--TDVFSYAHLAEDVKYFLETESIAQADVL 84 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-----~~v~~ghG~S~---~--~~~~s~~~~a~dl~~~l~~l~~~~~~lv 84 (256)
+.|.|+++||+|=-......++..|..-+. -++...+..+. . ..+..+.+.++-...+++..|.++++|+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~Lm 200 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILM 200 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEE
Confidence 357888999998655554444443332111 12233333332 1 2223466777777788878898999999
Q ss_pred eeChhHHHHHHHHH--hCC---CCcccEEEEeC
Q psy1055 85 GHSMGGRAMMYLAL--ANP---HLVSSLIVVDI 112 (256)
Q Consensus 85 GhS~Gg~ia~~~A~--~~P---~~v~~lil~~~ 112 (256)
|-|.||.+++.+.. +++ ..=+++|||.+
T Consensus 201 GDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 201 GDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred ecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 99999999987654 221 23468888764
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.78 E-value=0.0045 Score=55.54 Aligned_cols=83 Identities=13% Similarity=0.043 Sum_probs=49.7
Q ss_pred hcHHHHHHHHHhhcCcee-cccccccCCCC---CCCHHHHHHHHHHHHHHc----CCCceeEEeeChhHHHHHHHHHhC-
Q psy1055 30 NNWNSLAKAIHRKTKKKI-ARNHGDSPHTD---VFSYAHLAEDVKYFLETE----SIAQADVLGHSMGGRAMMYLALAN- 100 (256)
Q Consensus 30 ~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~---~~s~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~A~~~- 100 (256)
..|..+++.|++.++.-. +.|-.-.-+.. ...-+.+-..+..+||.. +.+|++||||||||.+++.+-..-
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~ 235 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVE 235 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhcc
Confidence 467999999998765322 22221111101 011244545555555543 467999999999999999875421
Q ss_pred ----------C----CCcccEEEEeC
Q psy1055 101 ----------P----HLVSSLIVVDI 112 (256)
Q Consensus 101 ----------P----~~v~~lil~~~ 112 (256)
+ ..|++.|.+.+
T Consensus 236 ~~~~~gG~gG~~W~dKyI~s~I~Iag 261 (642)
T PLN02517 236 APAPMGGGGGPGWCAKHIKAVMNIGG 261 (642)
T ss_pred ccccccCCcchHHHHHHHHHheeccc
Confidence 1 35678888764
No 183
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.76 E-value=0.0041 Score=51.84 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=34.0
Q ss_pred CCCCCeeEEecCCCCCccCCChhHHhhc-C----CCCeEEEecCCCcccc
Q psy1055 193 TYGGPTLFIGGGRSDFIRQEDHPGIKSL-F----PRAEITYIEDAGHWVH 237 (256)
Q Consensus 193 ~i~~P~lii~G~~D~~~~~~~~~~~~~~-~----~~~~~~~i~~~GH~~~ 237 (256)
..+.|++|.+|..|.++|......+.+. + .+++++.++..+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 4579999999999999998776655443 2 2456677788999864
No 184
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.74 E-value=0.0044 Score=54.18 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCC--ceeEEeeChhHHHHHHHHH--hCCCCcccEEEEe
Q psy1055 65 LAEDVKYFLETESIA--QADVLGHSMGGRAMMYLAL--ANPHLVSSLIVVD 111 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~--~~P~~v~~lil~~ 111 (256)
-.+.+.+-|+++|.+ ++.|.|+|-||+.++.+.+ .....++++|+..
T Consensus 164 ALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~S 214 (491)
T COG2272 164 ALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALS 214 (491)
T ss_pred HHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhC
Confidence 445667788888875 6999999999988875543 2345777777654
No 185
>KOG2183|consensus
Probab=96.61 E-value=0.0092 Score=51.03 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=62.9
Q ss_pred CCCEEEEcCCccchhcHHH---HHHHHHhhcC-cee---cccccccCCCC-----------CCCHHHHHHHHHHHHHHcC
Q psy1055 16 TKPIIIMHGLLGSKNNWNS---LAKAIHRKTK-KKI---ARNHGDSPHTD-----------VFSYAHLAEDVKYFLETES 77 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~---~~~~l~~~~~-~~v---~~ghG~S~~~~-----------~~s~~~~a~dl~~~l~~l~ 77 (256)
+.||+|--|.=++...|.. ++-.+++..+ .+| .|-+|+|-+-. -.|.++--+|.++++..+.
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 3799999999877655432 2222333322 223 78888874321 1244555556666665552
Q ss_pred ------CCceeEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 78 ------IAQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 78 ------~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
..+++.+|-|.||++|..+-.+||..|.+..-.
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAa 198 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAA 198 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhc
Confidence 347999999999999999999999999887653
No 186
>PLN02454 triacylglycerol lipase
Probab=96.60 E-value=0.0038 Score=53.90 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcCCCc--eeEEeeChhHHHHHHHHHh
Q psy1055 64 HLAEDVKYFLETESIAQ--ADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 64 ~~a~dl~~~l~~l~~~~--~~lvGhS~Gg~ia~~~A~~ 99 (256)
++...|..+++...-.+ +++.||||||++|+..|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44455556666554444 8899999999999988853
No 187
>KOG3967|consensus
Probab=96.60 E-value=0.019 Score=44.80 Aligned_cols=44 Identities=23% Similarity=0.266 Sum_probs=35.7
Q ss_pred HHHHHHcCCCceeEEeeChhHHHHHHHHHhCC--CCcccEEEEeCC
Q psy1055 70 KYFLETESIAQADVLGHSMGGRAMMYLALANP--HLVSSLIVVDIS 113 (256)
Q Consensus 70 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P--~~v~~lil~~~~ 113 (256)
..++.....+.+.+|.||.||...+.+..++| +.|.++.+.|+.
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 35555566778999999999999999999998 477778887753
No 188
>PLN02571 triacylglycerol lipase
Probab=96.57 E-value=0.0037 Score=53.99 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcCCC--ceeEEeeChhHHHHHHHHHh
Q psy1055 63 AHLAEDVKYFLETESIA--QADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~~ 99 (256)
+++.++|..+++...-+ ++++.||||||++|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 56777888888776543 58999999999999988764
No 189
>KOG2369|consensus
Probab=96.54 E-value=0.014 Score=50.88 Aligned_cols=84 Identities=14% Similarity=0.177 Sum_probs=52.5
Q ss_pred chhcHHHHHHHHHhhcCcee--cccccc----cCCCC---CCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 28 SKNNWNSLAKAIHRKTKKKI--ARNHGD----SPHTD---VFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 28 ~~~~w~~~~~~l~~~~~~~v--~~ghG~----S~~~~---~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+..+|..+++.|..-++.-= +.|.+- |.... +..+..+..-|....+..|.+|++||+|||||.+.+.+-.
T Consensus 122 ~y~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 122 GYWYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred hhHHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHh
Confidence 34578888888886544311 333331 11111 1123444444444445557799999999999999999998
Q ss_pred hCCC--------CcccEEEEe
Q psy1055 99 ANPH--------LVSSLIVVD 111 (256)
Q Consensus 99 ~~P~--------~v~~lil~~ 111 (256)
.+++ .+++.+-++
T Consensus 202 w~~~~~~~W~~k~I~sfvnig 222 (473)
T KOG2369|consen 202 WVEAEGPAWCDKYIKSFVNIG 222 (473)
T ss_pred cccccchhHHHHHHHHHHccC
Confidence 8887 466666554
No 190
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.51 E-value=0.013 Score=44.92 Aligned_cols=51 Identities=24% Similarity=0.238 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHcCC-----CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 62 YAHLAEDVKYFLETESI-----AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
.+.-+.+|..|++.+.- ...+++|||+|+.++-..+...+..+..+|++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GS 142 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECC
Confidence 46788888888888742 3588999999999997777776889999999874
No 191
>KOG1202|consensus
Probab=96.38 E-value=0.02 Score=55.10 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=71.1
Q ss_pred CCCCCCEEEEcCCccchhcHHHHHHHHHhhcCceecccccc--cCCCCCCCHHHHHHHHHHHHHHcCC-CceeEEeeChh
Q psy1055 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGD--SPHTDVFSYAHLAEDVKYFLETESI-AQADVLGHSMG 89 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~--S~~~~~~s~~~~a~dl~~~l~~l~~-~~~~lvGhS~G 89 (256)
..++||+.|+|-.-+...-...++..|. .|-+|. +...+..|+++.|+-.+.-+++.+- .++.|+|.|+|
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rle-------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG 2192 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRLE-------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYG 2192 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhcC-------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchh
Confidence 3678999999988777655555554433 455553 2334556899999998888888864 58999999999
Q ss_pred HHHHHHHHH--hCCCCcccEEEEeCCCC
Q psy1055 90 GRAMMYLAL--ANPHLVSSLIVVDISPV 115 (256)
Q Consensus 90 g~ia~~~A~--~~P~~v~~lil~~~~~~ 115 (256)
+.++..+|. +..+-...+|++|.+|.
T Consensus 2193 ~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2193 ACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 999999875 34455666999997764
No 192
>PLN02934 triacylglycerol lipase
Probab=96.38 E-value=0.0058 Score=53.84 Aligned_cols=37 Identities=27% Similarity=0.426 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+....+.+..++++....++++.|||+||++|..+|+
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4567777888888887788999999999999988874
No 193
>PLN02408 phospholipase A1
Probab=96.38 E-value=0.0059 Score=51.98 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHcCCC--ceeEEeeChhHHHHHHHHHh
Q psy1055 63 AHLAEDVKYFLETESIA--QADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~~ 99 (256)
+...++|..+++...-+ ++++.|||+||++|...|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 34566777788776544 48999999999999887763
No 194
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.29 E-value=0.017 Score=52.08 Aligned_cols=99 Identities=15% Similarity=0.038 Sum_probs=52.7
Q ss_pred CCCEEEEcCCcc---chh-cHHHHHHHHHhhcCcee---cc----cccccCCC----CCCCHHH---HHHHHHHHHHHcC
Q psy1055 16 TKPIIIMHGLLG---SKN-NWNSLAKAIHRKTKKKI---AR----NHGDSPHT----DVFSYAH---LAEDVKYFLETES 77 (256)
Q Consensus 16 ~~~iv~lHG~~~---~~~-~w~~~~~~l~~~~~~~v---~~----ghG~S~~~----~~~s~~~---~a~dl~~~l~~l~ 77 (256)
-|.+|+|||.+- +.. ....-...+.++.-.+| +| |+-.++.. ..+-+.| --+.|.+-|+.+|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 477899999742 331 22222333444432233 33 43333221 1122333 3345555666677
Q ss_pred CC--ceeEEeeChhHHHHHHHHHh--CCCCcccEEEEeCCC
Q psy1055 78 IA--QADVLGHSMGGRAMMYLALA--NPHLVSSLIVVDISP 114 (256)
Q Consensus 78 ~~--~~~lvGhS~Gg~ia~~~A~~--~P~~v~~lil~~~~~ 114 (256)
.+ +++|.|||-||..+..+... ...++++.|+...++
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 64 69999999999888766553 346899999986544
No 195
>PLN02324 triacylglycerol lipase
Probab=96.08 E-value=0.01 Score=51.21 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHcCCC--ceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESIA--QADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~ 98 (256)
+.+.++|..++++..-+ ++++.|||+||++|...|.
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 45666777888876543 5889999999999998875
No 196
>KOG3043|consensus
Probab=96.03 E-value=0.0095 Score=46.80 Aligned_cols=63 Identities=11% Similarity=0.269 Sum_probs=47.5
Q ss_pred CCCCCeeEEecCCCCCccCCChhHHhhcCC-----CCeEEEecCCCccccc-----cCc------hHHHHHHHHHHhhc
Q psy1055 193 TYGGPTLFIGGGRSDFIRQEDHPGIKSLFP-----RAEITYIEDAGHWVHS-----QKP------DLFVDKVVDFYRSL 255 (256)
Q Consensus 193 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~GH~~~~-----e~p------~~~~~~i~~fl~~~ 255 (256)
.+++|+|+++|+.|..+|++....+.+.+. +++++++++-||.... +.| |+..+.+++|+.+.
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999988777666553 2469999999998763 334 45566777777653
No 197
>PLN02310 triacylglycerol lipase
Probab=96.03 E-value=0.02 Score=49.44 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHcC----CCceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETES----IAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
++..+.|..+++... -.++++.|||+||++|...|.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 556677778877653 236899999999999988775
No 198
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.91 E-value=0.075 Score=44.98 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=83.0
Q ss_pred HHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCCCCCCchhhHHHHHHHHHhcCcccccCCChHHHHH
Q psy1055 70 KYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRK 149 (256)
Q Consensus 70 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (256)
...+++..|+.+.+-|-|=-|+.++..|+.-|. |.++|- +... .-+....+..+-+.+-..+.-.......+
T Consensus 225 q~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDpr-v~aIvp-----~v~D--~Lni~a~L~hiyrsYGgnwpi~l~pyyae 296 (507)
T COG4287 225 QDELEQVEIKGFMVTGASKRGWTTWLTAIADPR-VFAIVP-----FVYD--NLNIEAQLLHIYRSYGGNWPIKLAPYYAE 296 (507)
T ss_pred HhhhhheeeeeEEEeccccchHHHHHHHhcCcc-hhhhhh-----hHHh--hcccHHHHHHHHHhhCCCCCcccchhHhh
Confidence 357778889999999999999999999998884 777762 1111 00112222211111100000000011111
Q ss_pred HHHHHHHhhccCCCCceeeeeChHHHHHhhhhhccCCCCCCCCCCCCCeeEEecCCCCCccCCChhHHhhcCCCCe-EEE
Q psy1055 150 IVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAE-ITY 228 (256)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~~ 228 (256)
.+.+. ++... ...+..+...+. .. ...-..++..|..|+.|..|+++.++.+....+.+|+.+ ++.
T Consensus 297 gi~er----l~tp~-----fkqL~~IiDPla-y~---~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrm 363 (507)
T COG4287 297 GIDER----LETPL-----FKQLLEIIDPLA-YR---NTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRM 363 (507)
T ss_pred hHHHh----hcCHH-----HHHHHHhhcHHH-Hh---hhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeee
Confidence 11111 11100 000011111110 00 000112678899999999999999999998888899865 789
Q ss_pred ecCCCccccccCchH
Q psy1055 229 IEDAGHWVHSQKPDL 243 (256)
Q Consensus 229 i~~~GH~~~~e~p~~ 243 (256)
+||..|..--.--++
T Consensus 364 vPN~~H~~~n~~i~e 378 (507)
T COG4287 364 VPNDPHNLINQFIKE 378 (507)
T ss_pred CCCCcchhhHHHHHH
Confidence 999999875443333
No 199
>PLN02753 triacylglycerol lipase
Probab=95.86 E-value=0.013 Score=51.85 Aligned_cols=36 Identities=28% Similarity=0.426 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCC-----CceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESI-----AQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+++.+.|..++++... .++++.|||+||++|...|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4566667777776643 47999999999999998875
No 200
>PLN02802 triacylglycerol lipase
Probab=95.83 E-value=0.014 Score=51.47 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCCC--ceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESIA--QADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~ 98 (256)
+++.++|..+++...-+ ++++.|||+||++|...|.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 35666777777766433 5889999999999988776
No 201
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.58 E-value=0.019 Score=50.80 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCC----CceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESI----AQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~A~ 98 (256)
++..++|..+++...- .++++.|||+||++|+..|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 4556777888876631 25899999999999988774
No 202
>PLN02719 triacylglycerol lipase
Probab=95.56 E-value=0.021 Score=50.54 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCC-----CceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESI-----AQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+++.+.|..++++..- .++++.|||+||++|...|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 4456667777776532 26899999999999998775
No 203
>PLN02761 lipase class 3 family protein
Probab=95.50 E-value=0.022 Score=50.47 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcC------CCceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETES------IAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+++.+.|..+++... -.++++.|||+||++|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 456677777777662 136999999999999988774
No 204
>PLN02847 triacylglycerol lipase
Probab=95.35 E-value=0.052 Score=48.92 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=25.8
Q ss_pred HHHHcCCCceeEEeeChhHHHHHHHHHh--CCCCcccEEEEe
Q psy1055 72 FLETESIAQADVLGHSMGGRAMMYLALA--NPHLVSSLIVVD 111 (256)
Q Consensus 72 ~l~~l~~~~~~lvGhS~Gg~ia~~~A~~--~P~~v~~lil~~ 111 (256)
.++...-=+++++|||+||.+|..++.. ....+..+.++.
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~CyA 285 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYILREQKEFSSTTCVT 285 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHHHhcCCCCCCceEEE
Confidence 3333443478999999999999887763 222355555543
No 205
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.34 E-value=0.039 Score=45.28 Aligned_cols=63 Identities=17% Similarity=0.363 Sum_probs=49.3
Q ss_pred CCC-CCeeEEecCCCCCccCCChhHHhhcCCC--CeEEEecCCCccccccCch---HHHHHHHHHHhhc
Q psy1055 193 TYG-GPTLFIGGGRSDFIRQEDHPGIKSLFPR--AEITYIEDAGHWVHSQKPD---LFVDKVVDFYRSL 255 (256)
Q Consensus 193 ~i~-~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~GH~~~~e~p~---~~~~~i~~fl~~~ 255 (256)
++. +|+|+++|.+|..++......+.+...+ .+...+++++|......+. +..+.+.+|+.+.
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 444 7999999999999998887776665544 6788889999999865544 6788888888764
No 206
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.32 E-value=0.023 Score=51.02 Aligned_cols=74 Identities=18% Similarity=0.117 Sum_probs=54.1
Q ss_pred HHHhhcCcee---cccccccCCCCC--CC-HHHHHHHHHHHHHHcCC--CceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 38 AIHRKTKKKI---ARNHGDSPHTDV--FS-YAHLAEDVKYFLETESI--AQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 38 ~l~~~~~~~v---~~ghG~S~~~~~--~s-~~~~a~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
.+..+++.+| .||.|.|....+ ++ =.+=..|+++++.+.-. .++--+|.|++|+..+++|+..|..+++++.
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p 154 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAP 154 (563)
T ss_pred eeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecc
Confidence 3555555554 899999976432 33 22334577777777644 4799999999999999999999989999986
Q ss_pred Ee
Q psy1055 110 VD 111 (256)
Q Consensus 110 ~~ 111 (256)
..
T Consensus 155 ~~ 156 (563)
T COG2936 155 TE 156 (563)
T ss_pred cc
Confidence 54
No 207
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.24 E-value=0.012 Score=51.32 Aligned_cols=98 Identities=21% Similarity=0.240 Sum_probs=59.5
Q ss_pred CCCCEEEEcCCccchhcHHHHHHH----HHhh--c------------Ccee----cccccccCCC----CCCCHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKA----IHRK--T------------KKKI----ARNHGDSPHT----DVFSYAHLAED 68 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~----l~~~--~------------~~~v----~~ghG~S~~~----~~~s~~~~a~d 68 (256)
+.|.|+.+.|.+|++++|..+... +... + -.++ .-|.|-|-.. ...+.+..|+|
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~ 118 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAED 118 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHH
T ss_pred CccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHHH
Confidence 356677799999999998554331 1100 0 0112 2367766322 12467889999
Q ss_pred HHHHHHHc-------CCCceeEEeeChhHHHHHHHHH----hC------CCCcccEEEEeC
Q psy1055 69 VKYFLETE-------SIAQADVLGHSMGGRAMMYLAL----AN------PHLVSSLIVVDI 112 (256)
Q Consensus 69 l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~A~----~~------P~~v~~lil~~~ 112 (256)
+.++|+.+ .-.+++|.|-|+||..+-.+|. .. +=.++++++.++
T Consensus 119 ~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng 179 (415)
T PF00450_consen 119 LYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNG 179 (415)
T ss_dssp HHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE
T ss_pred HHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCc
Confidence 99888876 3347999999999976655543 23 345888888763
No 208
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.11 E-value=0.052 Score=42.60 Aligned_cols=41 Identities=20% Similarity=0.369 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHHHHcCCC-ceeEEeeChhHHHHHHHHHhC
Q psy1055 60 FSYAHLAEDVKYFLETESIA-QADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
.-+.|..+....+|++.+-. +++|+|||-|+.+...+..++
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34677888888889888654 799999999999999887654
No 209
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.01 E-value=0.1 Score=41.98 Aligned_cols=81 Identities=9% Similarity=0.110 Sum_probs=46.6
Q ss_pred hcHHHHHHHHHhhcCcee-cc---cccccCCCCCCCHHHHHHHHHHHHHHcCCC----ceeEEeeChhHHHHHHHHHhCC
Q psy1055 30 NNWNSLAKAIHRKTKKKI-AR---NHGDSPHTDVFSYAHLAEDVKYFLETESIA----QADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 30 ~~w~~~~~~l~~~~~~~v-~~---ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
-.++.+.+.|+++++.+| .| ++-.-.- ...-+..+-..+.++.+..++. +++-||||||+.+-+.+...++
T Consensus 34 itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~-A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 34 ITYRYLLERLADRGYAVIATPYVVTFDHQAI-AREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred HHHHHHHHHHHhCCcEEEEEecCCCCcHHHH-HHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 346788899998876665 21 2110000 0000122222233333333332 4677999999999998888887
Q ss_pred CCcccEEEEe
Q psy1055 102 HLVSSLIVVD 111 (256)
Q Consensus 102 ~~v~~lil~~ 111 (256)
..-++-|++.
T Consensus 113 ~~r~gniliS 122 (250)
T PF07082_consen 113 VERAGNILIS 122 (250)
T ss_pred CcccceEEEe
Confidence 6667778775
No 210
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.92 E-value=0.019 Score=35.92 Aligned_cols=22 Identities=32% Similarity=0.833 Sum_probs=13.2
Q ss_pred CCCCCCCCEEEEcCCccchhcH
Q psy1055 11 PVDPDTKPIIIMHGLLGSKNNW 32 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~~w 32 (256)
+..+.++||+|.||+.+++..|
T Consensus 38 ~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 38 NQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTTTT--EEEEE--TT--GGGG
T ss_pred ccCCCCCcEEEECCcccChHHH
Confidence 3556788999999999999998
No 211
>KOG2182|consensus
Probab=94.78 E-value=0.23 Score=43.80 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=67.0
Q ss_pred CCCCCEEEEcCCccchhcHH----HHHHHHHhhcCc-ee---cccccccCCCCC--------CCHHHHHHHHHHHHHHcC
Q psy1055 14 PDTKPIIIMHGLLGSKNNWN----SLAKAIHRKTKK-KI---ARNHGDSPHTDV--------FSYAHLAEDVKYFLETES 77 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~----~~~~~l~~~~~~-~v---~~ghG~S~~~~~--------~s~~~~a~dl~~~l~~l~ 77 (256)
++||.-++|=|=+.....|- ...-.+++++.- ++ .|=+|.|.+..+ .|......||++||++++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 45666666666555554451 123334444432 22 788998754321 356788889999999884
Q ss_pred C-------CceeEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 78 I-------AQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 78 ~-------~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
. .+-+..|-|.-|.++..+-..|||.+.+-|-.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvAS 203 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVAS 203 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccc
Confidence 3 16778999999999999999999999998864
No 212
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.57 E-value=0.057 Score=41.58 Aligned_cols=49 Identities=10% Similarity=0.097 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHh------CCCCcccEEEEe
Q psy1055 63 AHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALA------NPHLVSSLIVVD 111 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~------~P~~v~~lil~~ 111 (256)
..+.+.|.+....---.+++|+|+|.|+.|+..++.. ..++|.++++++
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 3455555555555555789999999999999988766 346788888875
No 213
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.40 E-value=0.16 Score=43.63 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=47.6
Q ss_pred EEEEcCCccchhcHHHHHHHHHhhcCcee----cccccccCCCCCCCHHHHHHHHHHHHHHc----CCCceeEEeeChhH
Q psy1055 19 IIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPHTDVFSYAHLAEDVKYFLETE----SIAQADVLGHSMGG 90 (256)
Q Consensus 19 iv~lHG~~~~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~~~~~s~~~~a~dl~~~l~~l----~~~~~~lvGhS~Gg 90 (256)
-||.-|=++....=..+...|++++..+| +|-+-. .-|.+..++|+..+++.. +..++.|+|.|+|+
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGA 337 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGA 337 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccc
Confidence 34555555443333456677777765555 555542 236788888998888776 55789999999999
Q ss_pred HHHH
Q psy1055 91 RAMM 94 (256)
Q Consensus 91 ~ia~ 94 (256)
-|.-
T Consensus 338 DvlP 341 (456)
T COG3946 338 DVLP 341 (456)
T ss_pred hhhH
Confidence 7753
No 214
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.37 E-value=0.1 Score=44.33 Aligned_cols=38 Identities=29% Similarity=0.575 Sum_probs=26.6
Q ss_pred CCCceeEEeeChhHHHHHHHHH----hC-CCCcccEEEEeCCCC
Q psy1055 77 SIAQADVLGHSMGGRAMMYLAL----AN-PHLVSSLIVVDISPV 115 (256)
Q Consensus 77 ~~~~~~lvGhS~Gg~ia~~~A~----~~-P~~v~~lil~~~~~~ 115 (256)
|..+++|||||+|+-+...... +. -..|+.++|++ +|.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~G-apv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMG-APV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEec-CCC
Confidence 5567999999999988764333 31 23478888886 343
No 215
>KOG4569|consensus
Probab=94.34 E-value=0.072 Score=45.39 Aligned_cols=36 Identities=28% Similarity=0.344 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
..+.+++..+++...--++++-|||+||++|...|.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHH
Confidence 678888889999888667999999999999987775
No 216
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.32 E-value=0.11 Score=44.05 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=43.2
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhc------------------------CCC-CeEEEecCCCccccccCchHHHHHHH
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSL------------------------FPR-AEITYIEDAGHWVHSQKPDLFVDKVV 249 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~------------------------~~~-~~~~~i~~~GH~~~~e~p~~~~~~i~ 249 (256)
++++||-.|+.|-+++....+.+.+. ..+ .++..|-+|||+++ +||+...+++.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 47999999999966654333222111 122 56777889999997 69999999999
Q ss_pred HHHhh
Q psy1055 250 DFYRS 254 (256)
Q Consensus 250 ~fl~~ 254 (256)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99964
No 217
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.30 E-value=0.075 Score=43.80 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=59.3
Q ss_pred CCCCEEEEcCCcc--chhcHHHHHHHHHhhcC--cee--cccccccC-CCC-----CCCHHHHHHHHHHHHHHc-C----
Q psy1055 15 DTKPIIIMHGLLG--SKNNWNSLAKAIHRKTK--KKI--ARNHGDSP-HTD-----VFSYAHLAEDVKYFLETE-S---- 77 (256)
Q Consensus 15 ~~~~iv~lHG~~~--~~~~w~~~~~~l~~~~~--~~v--~~ghG~S~-~~~-----~~s~~~~a~dl~~~l~~l-~---- 77 (256)
+-|.+++.||--- +...|+.+-..+++. . ..+ .-+..... +.. .-.+..++++|.=++++- .
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g-~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~ 175 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAG-EIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSAD 175 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcC-CCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccccc
Confidence 3567888998643 444565555555542 2 112 33333321 111 112566777777676654 1
Q ss_pred CCceeEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 78 IAQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 78 ~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
-+.=.|.|-|+||.+++..|+.||+.+-.++.-
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~ 208 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQ 208 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeecc
Confidence 134679999999999999999999999888864
No 218
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.64 E-value=0.31 Score=42.55 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=40.8
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhc--------------------------CCCCeEEEecCCCccccccCchHHHHHH
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSL--------------------------FPRAEITYIEDAGHWVHSQKPDLFVDKV 248 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~--------------------------~~~~~~~~i~~~GH~~~~e~p~~~~~~i 248 (256)
++++||..|..|-+++....+.+.+. ..+.++..|.+|||+++.++|+...+++
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 48999999999987764332222111 1335678999999999999999999999
Q ss_pred HHHHh
Q psy1055 249 VDFYR 253 (256)
Q Consensus 249 ~~fl~ 253 (256)
..||+
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
No 219
>KOG1516|consensus
Probab=93.42 E-value=0.26 Score=44.92 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=53.5
Q ss_pred CCCEEEEcCCcc---chhcHHHHHH-HHHhhcCcee----cc----cc---cccCCCCCCCHHHHHH---HHHHHHHHcC
Q psy1055 16 TKPIIIMHGLLG---SKNNWNSLAK-AIHRKTKKKI----AR----NH---GDSPHTDVFSYAHLAE---DVKYFLETES 77 (256)
Q Consensus 16 ~~~iv~lHG~~~---~~~~w~~~~~-~l~~~~~~~v----~~----gh---G~S~~~~~~s~~~~a~---dl~~~l~~l~ 77 (256)
-|.+|++||.+- +..++..... .+.....+++ +| |+ |.+..+..+-+.|+.. .+..-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 577999999853 4344432222 2222212332 22 33 2222223343444443 3445555565
Q ss_pred C--CceeEEeeChhHHHHHHHHHh--CCCCcccEEEEeC
Q psy1055 78 I--AQADVLGHSMGGRAMMYLALA--NPHLVSSLIVVDI 112 (256)
Q Consensus 78 ~--~~~~lvGhS~Gg~ia~~~A~~--~P~~v~~lil~~~ 112 (256)
. ++++|.|||.||..+..+... ...++.+.|....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 4 469999999999999777652 2356777776543
No 220
>PLN02209 serine carboxypeptidase
Probab=93.42 E-value=0.19 Score=44.33 Aligned_cols=59 Identities=10% Similarity=0.122 Sum_probs=44.3
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhc------------------------CCC-CeEEEecCCCccccccCchHHHHHHH
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSL------------------------FPR-AEITYIEDAGHWVHSQKPDLFVDKVV 249 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~------------------------~~~-~~~~~i~~~GH~~~~e~p~~~~~~i~ 249 (256)
++++||..|+.|-+++....+.+.+. ..+ .++..|-+|||+++ .||++..+++.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 57999999999987765433332221 132 56677889999996 69999999999
Q ss_pred HHHhh
Q psy1055 250 DFYRS 254 (256)
Q Consensus 250 ~fl~~ 254 (256)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 221
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.16 E-value=0.29 Score=37.08 Aligned_cols=98 Identities=17% Similarity=0.232 Sum_probs=60.4
Q ss_pred CCCCCEEEEcCCccchhcHHH--HHHHHHhh---cCcee--cccccc-cC---C-CCCCCHHHHHHHHHHHHHHcCCCce
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNS--LAKAIHRK---TKKKI--ARNHGD-SP---H-TDVFSYAHLAEDVKYFLETESIAQA 81 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~--~~~~l~~~---~~~~v--~~ghG~-S~---~-~~~~s~~~~a~dl~~~l~~l~~~~~ 81 (256)
..|.|||+..-.++....+.. .++.|++. +..-+ +.|-.. |- . .........++--.-++++.-....
T Consensus 24 HaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gldsESf~a~h~~~adr~~rH~AyerYv~eEalpgs~ 103 (227)
T COG4947 24 HAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGLDSESFLATHKNAADRAERHRAYERYVIEEALPGST 103 (227)
T ss_pred CCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecccchHhHhhhcCCHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 456788888877776666644 35555542 22112 344321 10 1 1112334444444445555444567
Q ss_pred eEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 82 DVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
.+-|.||||+-|..+-.+||+..+++|-+.
T Consensus 104 ~~sgcsmGayhA~nfvfrhP~lftkvialS 133 (227)
T COG4947 104 IVSGCSMGAYHAANFVFRHPHLFTKVIALS 133 (227)
T ss_pred cccccchhhhhhhhhheeChhHhhhheeec
Confidence 788999999999999999999999999754
No 222
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.91 E-value=0.26 Score=43.56 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=44.1
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhc------------------------CCC-CeEEEecCCCccccccCchHHHHHHH
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSL------------------------FPR-AEITYIEDAGHWVHSQKPDLFVDKVV 249 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~------------------------~~~-~~~~~i~~~GH~~~~e~p~~~~~~i~ 249 (256)
+.++||-.|+.|-+++....+.+-+. ..+ .++..|-+|||+++ .||+...+++.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 57999999999977765443332111 122 56778889999997 69999999999
Q ss_pred HHHhh
Q psy1055 250 DFYRS 254 (256)
Q Consensus 250 ~fl~~ 254 (256)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99974
No 223
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=92.50 E-value=1.1 Score=40.63 Aligned_cols=94 Identities=12% Similarity=0.162 Sum_probs=56.8
Q ss_pred CCCCEEEEcCCcc--chhcHHHHHHHHHhhcCcee---cccccccCC---------CCCCCHHHHHHHHHHHHHHcCC--
Q psy1055 15 DTKPIIIMHGLLG--SKNNWNSLAKAIHRKTKKKI---ARNHGDSPH---------TDVFSYAHLAEDVKYFLETESI-- 78 (256)
Q Consensus 15 ~~~~iv~lHG~~~--~~~~w~~~~~~l~~~~~~~v---~~ghG~S~~---------~~~~s~~~~a~dl~~~l~~l~~-- 78 (256)
+.|.+|+-=|.-. -.-.|...+...-+++...| +||=|+=.. ...-.++++++-+..++++ |+
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gits 498 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITS 498 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCC
Confidence 4555544333321 12235555555555655544 888664321 1112345555555555444 55
Q ss_pred -CceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 79 -AQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 79 -~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
+++-+-|-|-||.++-..-.++||.+.++|+
T Consensus 499 pe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 499 PEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred HHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 3577899999999998888899999999886
No 224
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=92.46 E-value=0.22 Score=43.00 Aligned_cols=30 Identities=27% Similarity=0.282 Sum_probs=27.6
Q ss_pred ceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 80 QADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 80 ~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
+++.+|+|.||++|...|.-.|-.+.+++=
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iD 214 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVID 214 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEe
Confidence 789999999999999999999999998863
No 225
>KOG2551|consensus
Probab=92.44 E-value=0.6 Score=36.87 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCCce-eEEeeChhHHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESIAQA-DVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~~~-~lvGhS~Gg~ia~~~A~ 98 (256)
+.-.+-|...++++| ++ -|+|.|-|+.++..++.
T Consensus 89 eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 89 EESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhc
Confidence 334455566666655 43 48999999999998887
No 226
>KOG2237|consensus
Probab=91.64 E-value=0.14 Score=46.32 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=63.0
Q ss_pred CCCCCCCEEEEcCCcc-c-hhcHHHHHHHHHhhcCcee---cccccc---cCCC------CCCCHHHHHHHHHHHHHHc-
Q psy1055 12 VDPDTKPIIIMHGLLG-S-KNNWNSLAKAIHRKTKKKI---ARNHGD---SPHT------DVFSYAHLAEDVKYFLETE- 76 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~-~-~~~w~~~~~~l~~~~~~~v---~~ghG~---S~~~------~~~s~~~~a~dl~~~l~~l- 76 (256)
.+++.|-+|..+|..+ + .-+|+.-.-.|.+.+..++ .||=|. +-+. ..-+++++...+..+++.-
T Consensus 466 ~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gy 545 (712)
T KOG2237|consen 466 LDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGY 545 (712)
T ss_pred hcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCC
Confidence 3444555555555443 2 1235443333445443333 687553 2221 2246888888888888764
Q ss_pred -CCCceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 77 -SIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 77 -~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
.-++..+.|-|-||.++....-++|+++.++|+
T Consensus 546 t~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia 579 (712)
T KOG2237|consen 546 TQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIA 579 (712)
T ss_pred CCccceeEecccCccchhHHHhccCchHhhhhhh
Confidence 235788999999999999999999999999986
No 227
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=91.38 E-value=0.32 Score=37.65 Aligned_cols=60 Identities=15% Similarity=0.202 Sum_probs=45.3
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhcCCC-----CeEEEecCCCccccccC---chHHHHHHHHHHhh
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSLFPR-----AEITYIEDAGHWVHSQK---PDLFVDKVVDFYRS 254 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~-----~~~~~i~~~GH~~~~e~---p~~~~~~i~~fl~~ 254 (256)
++++|-|-|+.|++..+-.....++++.+ .+.++.++|||+-...= -+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 56788899999999887655555555443 34678899999986654 37888899999875
No 228
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.19 E-value=0.34 Score=39.71 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
+.++.+..--.++.|-|||+||++|..+-.++-
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334444445568899999999999999988774
No 229
>KOG4540|consensus
Probab=91.19 E-value=0.34 Score=39.71 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
+.++.+..--.++.|-|||+||++|..+-.++-
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334444445568899999999999999988774
No 230
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=90.29 E-value=0.47 Score=42.01 Aligned_cols=103 Identities=20% Similarity=0.232 Sum_probs=58.4
Q ss_pred CCCCCC-CCCCEEEEcCCccchhcHHHHHHH----HHhh----c----------Ccee---c-ccccccCC-CC--CCCH
Q psy1055 9 ETPVDP-DTKPIIIMHGLLGSKNNWNSLAKA----IHRK----T----------KKKI---A-RNHGDSPH-TD--VFSY 62 (256)
Q Consensus 9 ~~~~~~-~~~~iv~lHG~~~~~~~w~~~~~~----l~~~----~----------~~~v---~-~ghG~S~~-~~--~~s~ 62 (256)
+.|-++ +.|.|+.+.|++|+++.|..+... +... + -.+| . -|.|-|.. .. .-+.
T Consensus 93 e~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~ 172 (498)
T COG2939 93 ESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDF 172 (498)
T ss_pred cCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccch
Confidence 344333 355566799999999998876442 1110 0 0112 2 25565532 11 1244
Q ss_pred HHHHHHHHHHHHHc-------C--CCceeEEeeChhHHHHHHHHHhCCC---CcccEEEEe
Q psy1055 63 AHLAEDVKYFLETE-------S--IAQADVLGHSMGGRAMMYLALANPH---LVSSLIVVD 111 (256)
Q Consensus 63 ~~~a~dl~~~l~~l-------~--~~~~~lvGhS~Gg~ia~~~A~~~P~---~v~~lil~~ 111 (256)
....+|+..+.+.. . ..+.+|+|-|.||.-+-.+|..--+ ..++++++.
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nls 233 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLS 233 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEee
Confidence 55556665555443 2 2589999999999877777653222 356666543
No 231
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=90.08 E-value=1.2 Score=40.88 Aligned_cols=99 Identities=15% Similarity=0.215 Sum_probs=65.8
Q ss_pred CCCCCCCCEEEEcCCccchh--cHHHHHHHHHhhcCce-e--cccccccCC---------CCCCCHHHHHHHHHHHHHHc
Q psy1055 11 PVDPDTKPIIIMHGLLGSKN--NWNSLAKAIHRKTKKK-I--ARNHGDSPH---------TDVFSYAHLAEDVKYFLETE 76 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~--~w~~~~~~l~~~~~~~-v--~~ghG~S~~---------~~~~s~~~~a~dl~~~l~~l 76 (256)
..++++|.++.-=|.-+... .|....-.|.++++.. | .||=|.=.+ ...-|+.++.+....++++-
T Consensus 443 ~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g 522 (682)
T COG1770 443 KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEG 522 (682)
T ss_pred CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcC
Confidence 45566666666666655322 2443333355565433 2 687654321 12246888887777777664
Q ss_pred CC--CceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 77 SI--AQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 77 ~~--~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
-. +++.++|-|.||+++-+.|.+.|++++++|.
T Consensus 523 ~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA 557 (682)
T COG1770 523 YTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIA 557 (682)
T ss_pred cCCccceEEeccCchhHHHHHHHhhChhhhhheee
Confidence 32 3688999999999999999999999999986
No 232
>KOG2029|consensus
Probab=89.80 E-value=0.57 Score=42.32 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCCC---ceeEEeeChhHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESIA---QADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~---~~~lvGhS~Gg~ia~~~A 97 (256)
..-+..+.+.+++.++. +++.|||||||..+=.+-
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 34445555555555553 688999999998885443
No 233
>KOG1282|consensus
Probab=89.39 E-value=0.76 Score=40.67 Aligned_cols=59 Identities=15% Similarity=0.150 Sum_probs=44.6
Q ss_pred CCeeEEecCCCCCccCCChhHHhhc-------------------------CCCCeEEEecCCCccccccCchHHHHHHHH
Q psy1055 196 GPTLFIGGGRSDFIRQEDHPGIKSL-------------------------FPRAEITYIEDAGHWVHSQKPDLFVDKVVD 250 (256)
Q Consensus 196 ~P~lii~G~~D~~~~~~~~~~~~~~-------------------------~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~ 250 (256)
.|++|..|+.|-.+|-...+..-+. ..+..+..+.+|||+++.++|+....++..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999987775544432111 112334677899999999999999999999
Q ss_pred HHhh
Q psy1055 251 FYRS 254 (256)
Q Consensus 251 fl~~ 254 (256)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9964
No 234
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=87.51 E-value=1.2 Score=38.61 Aligned_cols=96 Identities=18% Similarity=0.163 Sum_probs=66.2
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCcee-cccccccCCCC-C---CCHHHHHHHHHHHHHHcC-C--CceeEEee
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI-ARNHGDSPHTD-V---FSYAHLAEDVKYFLETES-I--AQADVLGH 86 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~-~---~s~~~~a~dl~~~l~~l~-~--~~~~lvGh 86 (256)
+.|.|+..-|...+.+-.+.=-..|-+.++..| .|-+|.|.+.+ + .++..-|.|..++++++. + .+=+=-|-
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~ 141 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGG 141 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCc
Confidence 345555566766654333221222333333335 89999996533 2 478999999999999983 1 34334599
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
|=||+.++.+=.-||+-|.+.|-.
T Consensus 142 SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 142 SKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred CCCceeEEEEeeeCCCCCCeeeee
Confidence 999999999999999999999864
No 235
>KOG2521|consensus
Probab=87.28 E-value=18 Score=31.03 Aligned_cols=60 Identities=18% Similarity=0.293 Sum_probs=45.4
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhcC--CC--CeEEEecCCCcccccc-CchHHHHHHHHHHhh
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSLF--PR--AEITYIEDAGHWVHSQ-KPDLFVDKVVDFYRS 254 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~~--~~--~~~~~i~~~GH~~~~e-~p~~~~~~i~~fl~~ 254 (256)
..+.+.+.+..|.+++.+..+.+.+.. .+ .+..-+.++-|..|.. .|..+.+...+|++.
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 457788889999999988777663322 33 4556667888988766 599999999999975
No 236
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=86.51 E-value=1.1 Score=37.76 Aligned_cols=63 Identities=19% Similarity=0.148 Sum_probs=38.8
Q ss_pred cHHHHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 31 NWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 31 ~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
.|+.++..|...-.-+++-|=| . .--..+ =+...+++.|+.--.++|.|+|+.++..||..++
T Consensus 3 d~~rl~r~l~~~~~gLvL~GGG-~------RG~ahi-GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 3 DFSRLARVLTGNSIALVLGGGG-A------RGCAHI-GVIKALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred hHHHHHHHhcCCCEEEEECChH-H------HHHHHH-HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4666677776441112254422 1 111222 3455566668888889999999999999998653
No 237
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=85.81 E-value=0.65 Score=39.19 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 68 DVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 68 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
-+.++++..|+.+..++|||+|=+.|+..|
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHC
Confidence 355777888999999999999998887665
No 238
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=85.79 E-value=1 Score=37.48 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=24.9
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+.+++..+|+++-.++|||+|-+.|+..|.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 445677889999999999999999987664
No 239
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=85.12 E-value=1.5 Score=33.33 Aligned_cols=33 Identities=21% Similarity=0.117 Sum_probs=25.7
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
+...+++.++..-.++|-|.|+.++..+|...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344455558888889999999999999998643
No 240
>PRK10279 hypothetical protein; Provisional
Probab=84.58 E-value=1.3 Score=37.04 Aligned_cols=34 Identities=24% Similarity=0.086 Sum_probs=27.0
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCC
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANPH 102 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~ 102 (256)
+...+++.++..-.++|.|+|+.++..||....+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 3445555788888899999999999999976543
No 241
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=84.23 E-value=1.6 Score=33.69 Aligned_cols=31 Identities=32% Similarity=0.307 Sum_probs=24.4
Q ss_pred HHHHHHcCCCceeEEeeChhHHHHHHHHHhC
Q psy1055 70 KYFLETESIAQADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 70 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
...+++.++..-.++|.|.||.+|..+|..+
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344556777788999999999999999754
No 242
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=84.01 E-value=1.6 Score=35.88 Aligned_cols=32 Identities=22% Similarity=0.140 Sum_probs=26.1
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHHhC
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
+...+++.++.--.++|.|+|+.++..||...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 34445777998788999999999999999764
No 243
>PLN02209 serine carboxypeptidase
Probab=83.50 E-value=4.8 Score=35.69 Aligned_cols=96 Identities=19% Similarity=0.123 Sum_probs=55.4
Q ss_pred CCCEEEEcCCccchhcHHHHHHH----HHh------------hc------Ccee----cccccccCC--CCC-CCHHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKA----IHR------------KT------KKKI----ARNHGDSPH--TDV-FSYAHLA 66 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~----l~~------------~~------~~~v----~~ghG~S~~--~~~-~s~~~~a 66 (256)
.|.++.+-|.+|+++++..+.+. +.. +- ..++ .-|.|-|-. ... .+-++.+
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a 147 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSEV 147 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHHH
Confidence 56677799999998887544321 110 00 0112 346776522 111 2234556
Q ss_pred HHHHHHHHHc-------CCCceeEEeeChhHHHHHHHHH----hC------CCCcccEEEEe
Q psy1055 67 EDVKYFLETE-------SIAQADVLGHSMGGRAMMYLAL----AN------PHLVSSLIVVD 111 (256)
Q Consensus 67 ~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~A~----~~------P~~v~~lil~~ 111 (256)
+|+..+++.. .-.+++|.|.|.||..+-.+|. .. +=.++++++.+
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 7777777664 2247999999999975555443 11 12566777765
No 244
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=83.40 E-value=25 Score=29.36 Aligned_cols=52 Identities=13% Similarity=0.138 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEeeChh-----HHHHHHHHHhCCCCcccEEEEe
Q psy1055 59 VFSYAHLAEDVKYFLETESIAQADVLGHSMG-----GRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 59 ~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~G-----g~ia~~~A~~~P~~v~~lil~~ 111 (256)
.+.++++.+-+.+++..+|-+ +++++-..= ++|++.-+...|..-.++++++
T Consensus 150 ~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmG 206 (415)
T COG4553 150 HFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMG 206 (415)
T ss_pred CccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeec
Confidence 478999999999999999955 888877654 4666666677898889999986
No 245
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=83.20 E-value=1.6 Score=36.38 Aligned_cols=31 Identities=23% Similarity=0.009 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCCceeEEeeChhHHHHHHHHH
Q psy1055 68 DVKYFLETESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 68 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
-+.+++.+.|+.+..++|||+|=+.|+..|.
T Consensus 65 al~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 65 AAWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 3456677889999999999999998887763
No 246
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=82.26 E-value=4.8 Score=27.72 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=49.8
Q ss_pred HHHHHHHHHhhcC---ceecccccccCCC--CCCCHHHHHHHHHHHHHHcCCCceeEEeeChhH--HHHHHHHHhCCCCc
Q psy1055 32 WNSLAKAIHRKTK---KKIARNHGDSPHT--DVFSYAHLAEDVKYFLETESIAQADVLGHSMGG--RAMMYLALANPHLV 104 (256)
Q Consensus 32 w~~~~~~l~~~~~---~~v~~ghG~S~~~--~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg--~ia~~~A~~~P~~v 104 (256)
+..+.+.+..+.. -+.++..|.+... ..-.-+.=...|..+++.+--.+++|||-|--. -+-..+|.+||++|
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i 92 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRI 92 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCE
Confidence 4445555655422 1226776654221 111113444677888999988899999998776 34446788999999
Q ss_pred ccEEE
Q psy1055 105 SSLIV 109 (256)
Q Consensus 105 ~~lil 109 (256)
.++.+
T Consensus 93 ~ai~I 97 (100)
T PF09949_consen 93 LAIYI 97 (100)
T ss_pred EEEEE
Confidence 99875
No 247
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=82.10 E-value=2.3 Score=33.89 Aligned_cols=29 Identities=17% Similarity=0.087 Sum_probs=23.3
Q ss_pred HHHHcCCCceeEEeeChhHHHHHHHHHhC
Q psy1055 72 FLETESIAQADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 72 ~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
.+++.+++.-.++|.|.|+.++..+|...
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 33445777778999999999999999754
No 248
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=82.10 E-value=1.7 Score=35.88 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=24.1
Q ss_pred HHHHHHHcC-CCceeEEeeChhHHHHHHHHH
Q psy1055 69 VKYFLETES-IAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 69 l~~~l~~l~-~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
+.+++.+.+ +.+..++|||+|=+.|+..|.
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 345566677 999999999999998887764
No 249
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=82.00 E-value=2 Score=36.06 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=27.6
Q ss_pred HHHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 69 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
+.+-+++.++..-.|.|.|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 455667778999999999999999999998644
No 250
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=80.78 E-value=3 Score=37.40 Aligned_cols=60 Identities=15% Similarity=0.219 Sum_probs=45.5
Q ss_pred CCCeeEEecCCCCCccCCChhH----HhhcCCC--------CeEEEecCCCcccccc--CchHHHHHHHHHHhh
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPG----IKSLFPR--------AEITYIEDAGHWVHSQ--KPDLFVDKVVDFYRS 254 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~----~~~~~~~--------~~~~~i~~~GH~~~~e--~p~~~~~~i~~fl~~ 254 (256)
...+++.+|..|..+++..... +.+.+.+ .|+..+|+.+|+.--. .|-.....|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 5699999999999999876433 3333332 4789999999998544 566788889999875
No 251
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=80.43 E-value=6.9 Score=34.70 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=54.0
Q ss_pred CCCCEEEEcCCccchhcHHHHH---HH-------------HHhh-c-----Ccee----cccccccCCC--CCCC-HHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLA---KA-------------IHRK-T-----KKKI----ARNHGDSPHT--DVFS-YAHL 65 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~---~~-------------l~~~-~-----~~~v----~~ghG~S~~~--~~~s-~~~~ 65 (256)
+.|.|+.+-|.+|+++.+..+. +. |.++ + ..++ .-|.|-|-.. ..++ -...
T Consensus 65 ~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~ 144 (433)
T PLN03016 65 EDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISE 144 (433)
T ss_pred cCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 3566777999999888653322 21 1100 0 0122 3477766321 1121 1233
Q ss_pred HHHHHHHHHHc-------CCCceeEEeeChhHHHHHHHHHh----C------CCCcccEEEEe
Q psy1055 66 AEDVKYFLETE-------SIAQADVLGHSMGGRAMMYLALA----N------PHLVSSLIVVD 111 (256)
Q Consensus 66 a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~A~~----~------P~~v~~lil~~ 111 (256)
|+++..++... .-.+++|.|.|.||..+-.+|.. . +=.++++++.+
T Consensus 145 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 207 (433)
T PLN03016 145 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGN 207 (433)
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecC
Confidence 46666666553 33579999999999755555431 1 22677888765
No 252
>PRK12467 peptide synthase; Provisional
Probab=80.24 E-value=11 Score=43.13 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=66.2
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCceeccccccc-CCCCCCCHHHHHHHHHHHHHHcC-CCceeEEeeChhHHHHH
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDS-PHTDVFSYAHLAEDVKYFLETES-IAQADVLGHSMGGRAMM 94 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~S-~~~~~~s~~~~a~dl~~~l~~l~-~~~~~lvGhS~Gg~ia~ 94 (256)
+.+++.|...+....+.++...+.....++.++-|+-. +.....+++.++......+.... ..+..+.|+|+||.++.
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~ 3772 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLAR 3772 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccCCccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHH
Confidence 45999999988877777787778654323335555432 23333567777777777776554 35799999999999998
Q ss_pred HHHH---hCCCCcccEEEEeCC
Q psy1055 95 YLAL---ANPHLVSSLIVVDIS 113 (256)
Q Consensus 95 ~~A~---~~P~~v~~lil~~~~ 113 (256)
.+|. +.-+.+.-+.+++..
T Consensus 3773 ~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3773 LVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred HHHHHHHHcCCceeEEEEEecc
Confidence 8775 345667766666543
No 253
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=77.77 E-value=3.7 Score=32.50 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=25.5
Q ss_pred HHHHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 70 KYFLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 70 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
..-+++.++.--.++|.|.|+.+|..+|...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33455557776778999999999999998775
No 254
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=77.40 E-value=3.3 Score=31.55 Aligned_cols=30 Identities=27% Similarity=0.242 Sum_probs=23.7
Q ss_pred HHHHcCCCceeEEeeChhHHHHHHHHHhCC
Q psy1055 72 FLETESIAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 72 ~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
.+++.++.--.++|.|.|+.++..+|...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334557776778999999999999998654
No 255
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=77.32 E-value=7.7 Score=31.05 Aligned_cols=39 Identities=15% Similarity=0.020 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHH-c-CCCceeEEeeChhHHHHHHHHH
Q psy1055 60 FSYAHLAEDVKYFLET-E-SIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~-l-~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
.|...=++.+.+.++. . .-++++++|+|.|+.++...+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~ 67 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLR 67 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHH
Confidence 4555555566655554 2 3367999999999999976554
No 256
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.08 E-value=22 Score=26.92 Aligned_cols=34 Identities=12% Similarity=0.284 Sum_probs=25.1
Q ss_pred EecCCCCCccCCChhHHhhcCCCCeEEEecCCCcccc
Q psy1055 201 IGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH 237 (256)
Q Consensus 201 i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~ 237 (256)
+.|.+|.++|+.....+.. +.+.+..|+ .+|+++
T Consensus 170 ~v~skDkIFpp~nq~ayw~--~rc~v~ei~-g~H~~F 203 (214)
T COG2830 170 YVGSKDKIFPPANQHAYWN--ARCAVIEIN-GEHYLF 203 (214)
T ss_pred hccCCCcccCCcchhhhhc--cceeEEEec-CcceEE
Confidence 3478899999987666654 568888885 588774
No 257
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=74.87 E-value=2.2 Score=37.65 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEE
Q psy1055 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~li 108 (256)
.+.-+.++. +.++.+-+++|.|.|+.+|..+|...++.+..++
T Consensus 88 hiGVLkaL~-E~gl~p~vIsGTSaGAivAal~as~~~eel~~~l 130 (421)
T cd07230 88 HIGVLKALF-EANLLPRIISGSSAGSIVAAILCTHTDEEIPELL 130 (421)
T ss_pred HHHHHHHHH-HcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 333444444 4477777899999999999999997776655443
No 258
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=74.19 E-value=5.7 Score=30.16 Aligned_cols=31 Identities=26% Similarity=0.107 Sum_probs=23.5
Q ss_pred HHHHHHcCCCceeEEeeChhHHHHHHHHHhC
Q psy1055 70 KYFLETESIAQADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 70 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
...+++.++..-.++|.|.|+.+|..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344455776677999999999999998654
No 259
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=73.60 E-value=6.2 Score=33.30 Aligned_cols=19 Identities=26% Similarity=0.288 Sum_probs=16.3
Q ss_pred eEEeeChhHHHHHHHHHhC
Q psy1055 82 DVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~ 100 (256)
.++|.|+||.||..+|..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4679999999999999754
No 260
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=72.67 E-value=4.5 Score=36.82 Aligned_cols=31 Identities=23% Similarity=0.149 Sum_probs=25.4
Q ss_pred HHHHH-HHcCCCceeEEeeChhHHHHHHHHHh
Q psy1055 69 VKYFL-ETESIAQADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 69 l~~~l-~~l~~~~~~lvGhS~Gg~ia~~~A~~ 99 (256)
+.+++ +..|+++-.++|||+|=+.|+..|--
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCC
Confidence 45566 57899999999999999998877753
No 261
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=72.05 E-value=10 Score=34.01 Aligned_cols=49 Identities=18% Similarity=0.148 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHc---CCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 63 AHLAEDVKYFLETE---SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 63 ~~~a~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
..++.--++++++. ..+.-++.|.|-||-=++..|.+||+...+++...
T Consensus 96 h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAga 147 (474)
T PF07519_consen 96 HETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGA 147 (474)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCC
Confidence 44444455666665 34568899999999999999999999999999754
No 262
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=70.64 E-value=11 Score=33.00 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=36.5
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccC-ch----HHHHHHHHH
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQK-PD----LFVDKVVDF 251 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~-p~----~~~~~i~~f 251 (256)
.-.+|+|.|+.|++..... .+.+--.++.+.+.|++.|...+.. |+ +....|..|
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~W 410 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRW 410 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHH
Confidence 3479999999998764322 2222235788999999999987664 33 344444444
No 263
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=70.49 E-value=2.8 Score=36.48 Aligned_cols=38 Identities=8% Similarity=0.066 Sum_probs=29.6
Q ss_pred HHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 72 FLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 72 ~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
.+.+.|+-+=++.|.|.|+.+|..+|...++.+..++.
T Consensus 104 aL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 104 ALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 34445777778999999999999999977766666653
No 264
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=70.29 E-value=2.6 Score=36.95 Aligned_cols=43 Identities=19% Similarity=0.179 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEE
Q psy1055 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~li 108 (256)
.+.-+.++.++ ++.+-+++|.|.|+.+|..+|...++.+..++
T Consensus 82 h~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 82 HFGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 44455555554 67777799999999999999997777776664
No 265
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=69.10 E-value=8.3 Score=31.53 Aligned_cols=33 Identities=15% Similarity=-0.019 Sum_probs=24.4
Q ss_pred HHHHHcCCC-ceeEEeeChhHHHHHHHHHhCCCC
Q psy1055 71 YFLETESIA-QADVLGHSMGGRAMMYLALANPHL 103 (256)
Q Consensus 71 ~~l~~l~~~-~~~lvGhS~Gg~ia~~~A~~~P~~ 103 (256)
..+++.++. --.++|.|.|+.++..++...+..
T Consensus 18 ~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 18 DAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 334444666 457899999999999999876543
No 266
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=67.61 E-value=9.4 Score=30.68 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=23.8
Q ss_pred HHHHHHHHcCCC--ceeEEeeChhHHHHHHHHHhCC
Q psy1055 68 DVKYFLETESIA--QADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 68 dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
-+..+. +.++. .-.++|-|.|+.++..||...+
T Consensus 17 Vl~~L~-e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLI-EAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHH-HcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 334444 45665 3479999999999999998654
No 267
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=67.58 E-value=3.3 Score=31.08 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=27.1
Q ss_pred cccccccCC----CCCCCHHHHHHHH----HHHHHHcC----CCceeEEeeChhHH
Q psy1055 48 ARNHGDSPH----TDVFSYAHLAEDV----KYFLETES----IAQADVLGHSMGGR 91 (256)
Q Consensus 48 ~~ghG~S~~----~~~~s~~~~a~dl----~~~l~~l~----~~~~~lvGhS~Gg~ 91 (256)
+-|||+... -..++.+.+|.-| ..|.++.+ .++++|||.||+..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 678997722 2346889999888 44555543 35788999998876
No 268
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=67.15 E-value=4.1 Score=34.34 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCccc
Q psy1055 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSS 106 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~ 106 (256)
++.-+.++.++ ++.+-++.|-|.|+.+|..++...++.+..
T Consensus 83 h~GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t~~El~~ 123 (323)
T cd07231 83 HVGVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRTDEELQS 123 (323)
T ss_pred HHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 44444455544 777778999999999999998865544443
No 269
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=66.39 E-value=11 Score=29.46 Aligned_cols=50 Identities=10% Similarity=-0.077 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEeeCh----hHHHHHHHHHhC-CCCcccEEE
Q psy1055 59 VFSYAHLAEDVKYFLETESIAQADVLGHSM----GGRAMMYLALAN-PHLVSSLIV 109 (256)
Q Consensus 59 ~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~----Gg~ia~~~A~~~-P~~v~~lil 109 (256)
.|+.+.+++.|.+++++.+ ..++|+|||. |..++-.+|.+- =..+..++-
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~ 144 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSK 144 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEE
Confidence 3667889999999998877 6788999988 778888877653 224444443
No 270
>KOG1282|consensus
Probab=66.10 E-value=29 Score=30.97 Aligned_cols=95 Identities=17% Similarity=0.084 Sum_probs=53.9
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHHh-----hcC-------------cee----ccccccc--CCCCC--CCHHHHHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIHR-----KTK-------------KKI----ARNHGDS--PHTDV--FSYAHLAEDV 69 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~~-----~~~-------------~~v----~~ghG~S--~~~~~--~s~~~~a~dl 69 (256)
.|.||-|-|++|+++.- ....++.. .+. .++ .-|.|=| ....+ .+-+..|+|+
T Consensus 73 dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~ 151 (454)
T KOG1282|consen 73 DPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDN 151 (454)
T ss_pred CCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHH
Confidence 45566699999988664 33332221 100 112 2355644 22212 2346677777
Q ss_pred HHHHHHc-------CCCceeEEeeChhHHHHHHHHH----hC------CCCcccEEEEe
Q psy1055 70 KYFLETE-------SIAQADVLGHSMGGRAMMYLAL----AN------PHLVSSLIVVD 111 (256)
Q Consensus 70 ~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~A~----~~------P~~v~~lil~~ 111 (256)
..++... .-.+++|.|-|.+|...=.+|. .. +=.++++++-+
T Consensus 152 ~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGN 210 (454)
T KOG1282|consen 152 YEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGN 210 (454)
T ss_pred HHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecC
Confidence 7766553 3357999999999966555543 22 23677777644
No 271
>KOG4388|consensus
Probab=64.68 E-value=28 Score=32.05 Aligned_cols=81 Identities=15% Similarity=0.042 Sum_probs=41.5
Q ss_pred CEEEEcCCcc---chhcHHHHHHHHHhhcCcee-cccccccCCCCCC-CHHHHHH---HHHHHHHHcCC--CceeEEeeC
Q psy1055 18 PIIIMHGLLG---SKNNWNSLAKAIHRKTKKKI-ARNHGDSPHTDVF-SYAHLAE---DVKYFLETESI--AQADVLGHS 87 (256)
Q Consensus 18 ~iv~lHG~~~---~~~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~~~-s~~~~a~---dl~~~l~~l~~--~~~~lvGhS 87 (256)
-||-+||.+- ++..-.++....++.-.+-| --.+...+..+-. -.++.-- +++.=.+.+|. ++++++|-|
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGDS 477 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGDS 477 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEeccC
Confidence 3555999863 55555666665555544433 2223222221111 1222111 12222234454 689999999
Q ss_pred hhHHHHHHHHH
Q psy1055 88 MGGRAMMYLAL 98 (256)
Q Consensus 88 ~Gg~ia~~~A~ 98 (256)
.||.+.+-.|+
T Consensus 478 AGgNL~~~VaL 488 (880)
T KOG4388|consen 478 AGGNLCFTVAL 488 (880)
T ss_pred CCcceeehhHH
Confidence 99987655544
No 272
>KOG2112|consensus
Probab=64.55 E-value=7.9 Score=30.35 Aligned_cols=13 Identities=31% Similarity=0.519 Sum_probs=6.1
Q ss_pred chHHHHHHHHHHh
Q psy1055 241 PDLFVDKVVDFYR 253 (256)
Q Consensus 241 p~~~~~~i~~fl~ 253 (256)
|-.+.+.-.+||.
T Consensus 159 p~~~g~~s~~~l~ 171 (206)
T KOG2112|consen 159 PFRFGEKSAQFLK 171 (206)
T ss_pred ehHHHHHHHHHHH
Confidence 4444444444443
No 273
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=64.24 E-value=6.1 Score=32.05 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.1
Q ss_pred eeEEeeChhHHHHHHHHHhCCCCc
Q psy1055 81 ADVLGHSMGGRAMMYLALANPHLV 104 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~~P~~v 104 (256)
-.++|-|.|+.++..||. .|+++
T Consensus 33 ~~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred CEEEEECHHHHHHHHHhc-ChHHH
Confidence 378999999999999984 35433
No 274
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=63.43 E-value=32 Score=27.32 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=31.6
Q ss_pred CCCCCCCCEEEEcCCccchhcHHHHHHHH-HhhcC-ce-e--cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEE
Q psy1055 11 PVDPDTKPIIIMHGLLGSKNNWNSLAKAI-HRKTK-KK-I--ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVL 84 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~~w~~~~~~l-~~~~~-~~-v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lv 84 (256)
|...+...|++.||...++..-....+.. .++++ .+ | .-|+- ..+++.+-++..++++++|+
T Consensus 133 pl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 133 PLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC------------cHHHHHHHHHHcCCceEEEe
Confidence 34455556666777766555444444433 23222 11 1 22221 12566667777777776665
No 275
>KOG3043|consensus
Probab=63.36 E-value=11 Score=30.00 Aligned_cols=92 Identities=15% Similarity=0.206 Sum_probs=55.7
Q ss_pred CEEEEcCCcc-chhcHHHHHHHHHhhcCcee----cccccccCC--C-------CCCCHHHHHHHHHHHHHH---cC-CC
Q psy1055 18 PIIIMHGLLG-SKNNWNSLAKAIHRKTKKKI----ARNHGDSPH--T-------DVFSYAHLAEDVKYFLET---ES-IA 79 (256)
Q Consensus 18 ~iv~lHG~~~-~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~--~-------~~~s~~~~a~dl~~~l~~---l~-~~ 79 (256)
.||.|--..| +...=+..++.++.+++.++ ++|---|+. . ...+.+..-.++..+++. .+ ..
T Consensus 41 ~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~k 120 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSK 120 (242)
T ss_pred EEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcc
Confidence 4555554443 33335678888887776665 566222211 0 112333344455554444 35 45
Q ss_pred ceeEEeeChhHHHHHHHHHhCCCCcccEEEE
Q psy1055 80 QADVLGHSMGGRAMMYLALANPHLVSSLIVV 110 (256)
Q Consensus 80 ~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~ 110 (256)
++-++|..|||.++..+....| .+.+.+..
T Consensus 121 kIGv~GfCwGak~vv~~~~~~~-~f~a~v~~ 150 (242)
T KOG3043|consen 121 KIGVVGFCWGAKVVVTLSAKDP-EFDAGVSF 150 (242)
T ss_pred eeeEEEEeecceEEEEeeccch-hheeeeEe
Confidence 6779999999999988888888 57776664
No 276
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=62.51 E-value=51 Score=30.40 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=56.1
Q ss_pred CCCCEEEEcCCccchhcHHHHHHH--------HHhhcCcee-------cccccc-cCCCCC---CCHHHHHHHHHHHHHH
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKA--------IHRKTKKKI-------ARNHGD-SPHTDV---FSYAHLAEDVKYFLET 75 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~--------l~~~~~~~v-------~~ghG~-S~~~~~---~s~~~~a~dl~~~l~~ 75 (256)
.+.|+-+-=|++-+......+.+. |.+.+..++ .+-+|+ |..... -....+...|.+++..
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e 336 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE 336 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh
Confidence 456888888888765555544432 222233443 233443 322111 1234555566666655
Q ss_pred cCCCceeEEee------ChhHHHHHHHHHhCCCCcccEEEEeC
Q psy1055 76 ESIAQADVLGH------SMGGRAMMYLALANPHLVSSLIVVDI 112 (256)
Q Consensus 76 l~~~~~~lvGh------S~Gg~ia~~~A~~~P~~v~~lil~~~ 112 (256)
.+++.++|| +.|+++++..-+..-.+ .+-+++|+
T Consensus 337 --~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 337 --SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred --cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 689999999 89999998754444333 67777773
No 277
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=62.13 E-value=13 Score=30.07 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=18.0
Q ss_pred eEEeeChhHHHHHHHHHhCC
Q psy1055 82 DVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~P 101 (256)
.++|-|.|+.++..+|...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999998654
No 278
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=61.53 E-value=51 Score=27.23 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHH-HHc-CCCceeEEeeChhHHHHHHHHHh
Q psy1055 61 SYAHLAEDVKYFL-ETE-SIAQADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 61 s~~~~a~dl~~~l-~~l-~~~~~~lvGhS~Gg~ia~~~A~~ 99 (256)
.+++-+.+...++ +.. ..+++.++|.|-|+++|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 4555555544444 444 34679999999999999988854
No 279
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=60.98 E-value=14 Score=33.11 Aligned_cols=29 Identities=21% Similarity=0.317 Sum_probs=23.8
Q ss_pred CeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 224 AEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 224 ~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
..+.++ ++|||++.++|+...+.+..|+.
T Consensus 461 ~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 461 TFLRIY-EAGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred eEEEEe-cCcceeecCChHHHHHHHHHHHh
Confidence 345555 58999999999999999988864
No 280
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=59.42 E-value=15 Score=29.77 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=23.8
Q ss_pred HHHHHHHHHHcC-CCceeEEeeChhHHHHHHHHHhCC
Q psy1055 66 AEDVKYFLETES-IAQADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 66 a~dl~~~l~~l~-~~~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
+.-+.++.++-. +..-.+.|-|.|+.+|..+|...+
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 334444555431 223349999999999999998654
No 281
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=59.32 E-value=12 Score=31.28 Aligned_cols=39 Identities=18% Similarity=0.143 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCc
Q psy1055 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLV 104 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v 104 (256)
.+.-+.++.+ .++..-+++|.|.|+.+|..++....+.+
T Consensus 84 h~Gvl~aL~e-~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 84 HLGVVKALWE-QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHHHH-cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 4444555554 46777789999999999999997654433
No 282
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=59.17 E-value=89 Score=27.36 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=52.5
Q ss_pred CCEEEEcCC---ccchhcHHHHHHHHHhhcCceecccc-----cccCCCCCCCHHHHHHHHHHHHHH---cCCCceeEEe
Q psy1055 17 KPIIIMHGL---LGSKNNWNSLAKAIHRKTKKKIARNH-----GDSPHTDVFSYAHLAEDVKYFLET---ESIAQADVLG 85 (256)
Q Consensus 17 ~~iv~lHG~---~~~~~~w~~~~~~l~~~~~~~v~~gh-----G~S~~~~~~s~~~~a~dl~~~l~~---l~~~~~~lvG 85 (256)
.|+|+..-. +..+......+..|.+.+..++-|.- |+.......+.+++.+.+...+.. +...++.+-|
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vlit~ 192 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLITA 192 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEEec
Confidence 577777653 22223345667778876544453332 333333445788888888887755 4445555555
Q ss_pred e------------------ChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 86 H------------------SMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 86 h------------------S~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
- .||..+|..++.+- ..++++.
T Consensus 193 g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~ 232 (390)
T TIGR00521 193 GPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLIT 232 (390)
T ss_pred CCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeC
Confidence 4 36677777766553 4455554
No 283
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=58.83 E-value=11 Score=33.66 Aligned_cols=90 Identities=19% Similarity=0.191 Sum_probs=52.3
Q ss_pred CCCCCCCCEEEEcCCccchhcHH--HHHHHHHhhcCcee--cccccccCCCCCCCHH-HHHHHHHHHHHHcCCC--ceeE
Q psy1055 11 PVDPDTKPIIIMHGLLGSKNNWN--SLAKAIHRKTKKKI--ARNHGDSPHTDVFSYA-HLAEDVKYFLETESIA--QADV 83 (256)
Q Consensus 11 ~~~~~~~~iv~lHG~~~~~~~w~--~~~~~l~~~~~~~v--~~ghG~S~~~~~~s~~-~~a~dl~~~l~~l~~~--~~~l 83 (256)
|+|-+.|-.|..-|+-. +.-|. .++..|..= +.++ .|=-|++=......++ ...+-|..-+++||.+ +.+|
T Consensus 284 PGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P-fLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLIL 361 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGAP-FLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLIL 361 (511)
T ss_pred CcCCCCCeEEeeccCcc-cCcchhHHHHHhcCCC-eEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeee
Confidence 44444444666666644 33333 234444421 1222 3444444222222343 4566666788888876 5999
Q ss_pred EeeChhHHHHHHHHHh-CCC
Q psy1055 84 LGHSMGGRAMMYLALA-NPH 102 (256)
Q Consensus 84 vGhS~Gg~ia~~~A~~-~P~ 102 (256)
-|-|||.+=|++|+++ .|.
T Consensus 362 SGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 362 SGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred ccccccchhhhhhcccCCCc
Confidence 9999999999999886 453
No 284
>COG3621 Patatin [General function prediction only]
Probab=57.77 E-value=19 Score=30.49 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHcCCC----ceeE-EeeChhHHHHHHHHHhCC
Q psy1055 64 HLAEDVKYFLETESIA----QADV-LGHSMGGRAMMYLALANP 101 (256)
Q Consensus 64 ~~a~dl~~~l~~l~~~----~~~l-vGhS~Gg~ia~~~A~~~P 101 (256)
.+-.++..+|++.+.+ .+.+ -|.|.||.+++.+|+-.+
T Consensus 22 ~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 22 AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 4556677777775433 3555 499999999999997544
No 285
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=57.16 E-value=1.1e+02 Score=25.21 Aligned_cols=73 Identities=18% Similarity=0.269 Sum_probs=45.9
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC-cee--cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeE-EeeChh
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-KKI--ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADV-LGHSMG 89 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-~~v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~l-vGhS~G 89 (256)
..+.||++=-|..++...|..-++.+...++ .++ .||. .+ .+.|+....--.....+++.-.-++.+ ..||.|
T Consensus 132 ~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~-~t--~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 132 KTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI-RT--FETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC-CC--CCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 5688999999999999999999998886654 333 6763 11 122433322222233444332235666 799999
No 286
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=56.72 E-value=70 Score=26.23 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=44.3
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC-ceecccccccCC-CC---CCCHHHHHHHHHHHHHHcCCCceeE-EeeC
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-KKIARNHGDSPH-TD---VFSYAHLAEDVKYFLETESIAQADV-LGHS 87 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-~~v~~ghG~S~~-~~---~~s~~~~a~dl~~~l~~l~~~~~~l-vGhS 87 (256)
..+.||++--|...+...|...++.+.+.+. .+++--.|-|.. +. ..++.. +..+-+..+ -++.+ .+||
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~----i~~lk~~~~-~pV~~ds~Hs 204 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSA----VPVLKKETH-LPIIVDPSHA 204 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHH----HHHHHHhhC-CCEEEcCCCC
Confidence 5688999999999999999999999987654 343222233332 11 122222 222223334 46777 7999
Q ss_pred hh
Q psy1055 88 MG 89 (256)
Q Consensus 88 ~G 89 (256)
.|
T Consensus 205 ~G 206 (260)
T TIGR01361 205 AG 206 (260)
T ss_pred CC
Confidence 88
No 287
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=55.92 E-value=19 Score=29.30 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=24.2
Q ss_pred HHHHHHHHHHcCCC----ceeEEeeChhHHHHHHHHHhCC
Q psy1055 66 AEDVKYFLETESIA----QADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 66 a~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
+.-+..+.++ ++. --.++|-|.|+.++..||...+
T Consensus 16 ~GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 16 VGVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred HHHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCC
Confidence 3344445454 433 3468999999999999997655
No 288
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=55.20 E-value=54 Score=25.22 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=36.6
Q ss_pred CCCCEEEEcCC---ccchhcHHHHHHHHHhhcCcee--cccc---cccCCCCCCCHHHHHHHHHHHHH
Q psy1055 15 DTKPIIIMHGL---LGSKNNWNSLAKAIHRKTKKKI--ARNH---GDSPHTDVFSYAHLAEDVKYFLE 74 (256)
Q Consensus 15 ~~~~iv~lHG~---~~~~~~w~~~~~~l~~~~~~~v--~~gh---G~S~~~~~~s~~~~a~dl~~~l~ 74 (256)
.+.|+|+..-. .-.+..+...+..|.+.+..++ .+|+ |+.......+++++.+.+..+++
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~g~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKEGLLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 36688887742 2233344566778888765555 4454 55444444577777777776654
No 289
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=55.14 E-value=23 Score=22.78 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=23.2
Q ss_pred ceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCCC
Q psy1055 80 QADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPV 115 (256)
Q Consensus 80 ~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~ 115 (256)
++.+|| ||.+++++|....+.=..+.++...+.
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence 356777 778888887766555678888875553
No 290
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=54.20 E-value=14 Score=31.09 Aligned_cols=29 Identities=24% Similarity=0.249 Sum_probs=21.8
Q ss_pred HHHHHHcC--CCceeEEeeChhHHHHHHHHH
Q psy1055 70 KYFLETES--IAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 70 ~~~l~~l~--~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
.+.+++.+ ..+..+.|||+|=+.|+..+.
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 34455544 677899999999999887765
No 291
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=53.61 E-value=13 Score=26.83 Aligned_cols=20 Identities=25% Similarity=0.637 Sum_probs=14.7
Q ss_pred CCCCCCEEEEcCCccchhcH
Q psy1055 13 DPDTKPIIIMHGLLGSKNNW 32 (256)
Q Consensus 13 ~~~~~~iv~lHG~~~~~~~w 32 (256)
.+.+|-|+-+||++|...+|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~ 68 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNF 68 (127)
T ss_pred CCCCCEEEEeecCCCCcHHH
Confidence 45555555699999988776
No 292
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=53.40 E-value=22 Score=28.94 Aligned_cols=36 Identities=17% Similarity=0.093 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCC----ceeEEeeChhHHHHHHHHHhCC
Q psy1055 65 LAEDVKYFLETESIA----QADVLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~A~~~P 101 (256)
++.-+..++++ ++. .-.++|-|.|+.++..||...+
T Consensus 19 h~GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 19 HVGVASCLLEH-APFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 33444455554 433 3558999999999999988654
No 293
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=52.45 E-value=76 Score=27.46 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=45.0
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC-ceecccccccCCCC--CCCHHHHHHHHHHHHHHcCCCceeE-EeeChh
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-KKIARNHGDSPHTD--VFSYAHLAEDVKYFLETESIAQADV-LGHSMG 89 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-~~v~~ghG~S~~~~--~~s~~~~a~dl~~~l~~l~~~~~~l-vGhS~G 89 (256)
..+.||++--|...+...|..-++.+...+. .+++--+|-|..+. ..++ ++ ..+..+-+..++ ++.+ ..||.|
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~l-dl-~~i~~lk~~~~~-PV~~d~~Hs~G 299 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTL-DI-SAVPILKQETHL-PVMVDVTHSTG 299 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCc-CH-HHHHHHHHHhCC-CEEEeCCCCCc
Confidence 5688999999999999999999999887655 34433334443321 1122 11 122223333453 4666 799988
No 294
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=51.33 E-value=26 Score=26.07 Aligned_cols=29 Identities=17% Similarity=0.132 Sum_probs=20.6
Q ss_pred HHHHHHHHcCC--CceeEEeeChhHHHHHHHH
Q psy1055 68 DVKYFLETESI--AQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 68 dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~A 97 (256)
-+.++.+ .++ .--++.|.|.|+.++..++
T Consensus 16 vl~~l~~-~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAE-RGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHH-hCCccCCCEEEEEcHHHHHHHHHh
Confidence 3344433 444 4466789999999999998
No 295
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=50.86 E-value=15 Score=29.98 Aligned_cols=15 Identities=33% Similarity=0.574 Sum_probs=12.6
Q ss_pred CCCceeEEeeChhHH
Q psy1055 77 SIAQADVLGHSMGGR 91 (256)
Q Consensus 77 ~~~~~~lvGhS~Gg~ 91 (256)
.++.+++.|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 557899999999974
No 296
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=50.14 E-value=1.2e+02 Score=26.57 Aligned_cols=69 Identities=10% Similarity=0.199 Sum_probs=40.1
Q ss_pred CCCEEEEcCCccchhcH-----HHHHHHHHhhcCceec--ccc---cccCCCCCCCHHHHHHHHHHHHHHc--CCCceeE
Q psy1055 16 TKPIIIMHGLLGSKNNW-----NSLAKAIHRKTKKKIA--RNH---GDSPHTDVFSYAHLAEDVKYFLETE--SIAQADV 83 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w-----~~~~~~l~~~~~~~v~--~gh---G~S~~~~~~s~~~~a~dl~~~l~~l--~~~~~~l 83 (256)
+.|+|+..-. |..+| ...+..|.+.+..++- +|+ |+.......+.++....+...+... ...++.+
T Consensus 116 ~~pvvi~Pam--n~~m~~~p~~~~Nl~~L~~~G~~ii~P~~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAM--NTQMWENPATQRNLATLRSRGVEIIGPASGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCC--ChhHcCCHHHHHHHHHHHHCCCEEECCCCccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 5688887744 33344 5567778876655553 332 3333334457788888887777543 3345555
Q ss_pred Eee
Q psy1055 84 LGH 86 (256)
Q Consensus 84 vGh 86 (256)
-|=
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 554
No 297
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=48.54 E-value=19 Score=30.15 Aligned_cols=16 Identities=31% Similarity=0.432 Sum_probs=14.8
Q ss_pred EEeeChhHHHHHHHHH
Q psy1055 83 VLGHSMGGRAMMYLAL 98 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~ 98 (256)
++|.|.||.||+.+|.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 6899999999999986
No 298
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=48.25 E-value=23 Score=33.65 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=22.8
Q ss_pred HHHHHHH---HcCCCceeEEeeChhHHHHHHHHH
Q psy1055 68 DVKYFLE---TESIAQADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 68 dl~~~l~---~l~~~~~~lvGhS~Gg~ia~~~A~ 98 (256)
++.+.++ .+++.--+++|.|+||.++..+|.
T Consensus 52 ~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 52 ALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 3444444 345666778999999999999886
No 299
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=48.08 E-value=41 Score=28.40 Aligned_cols=62 Identities=18% Similarity=0.074 Sum_probs=37.2
Q ss_pred cccccCC--CCCC-CHHHHHHHHHHHHHHc-------CCCceeEEeeChhHHHHHHHHHh----C------CCCcccEEE
Q psy1055 50 NHGDSPH--TDVF-SYAHLAEDVKYFLETE-------SIAQADVLGHSMGGRAMMYLALA----N------PHLVSSLIV 109 (256)
Q Consensus 50 ghG~S~~--~~~~-s~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~A~~----~------P~~v~~lil 109 (256)
|.|=|-. ...+ +-+..|+|+..+++.+ .-.+++|.|-|.||..+-.+|.. . +=.++++++
T Consensus 12 GvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~I 91 (319)
T PLN02213 12 GSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML 91 (319)
T ss_pred CCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEe
Confidence 7776622 1222 2234457777766663 34679999999999766555542 1 125677777
Q ss_pred Ee
Q psy1055 110 VD 111 (256)
Q Consensus 110 ~~ 111 (256)
-+
T Consensus 92 GN 93 (319)
T PLN02213 92 GN 93 (319)
T ss_pred CC
Confidence 55
No 300
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=46.94 E-value=29 Score=30.62 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=24.2
Q ss_pred CCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccc
Q psy1055 196 GPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHS 238 (256)
Q Consensus 196 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~ 238 (256)
..++++.|+.|++-....... .-+.....+||+++|+.=+
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 489999999999876542222 2234556789999999733
No 301
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=46.66 E-value=40 Score=26.21 Aligned_cols=52 Identities=21% Similarity=0.390 Sum_probs=34.0
Q ss_pred CCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
..|++-|.|+++.-.. ...+.+ ++.++..+|+ ||+.--+ .+.+.+.|.+-++
T Consensus 139 ~~~v~CiyG~~E~d~~---cp~l~~--~~~~~i~lpG-gHHfd~d-y~~La~~Il~~l~ 190 (192)
T PF06057_consen 139 PAPVQCIYGEDEDDSL---CPSLRQ--PGVEVIALPG-GHHFDGD-YDALAKRILDALK 190 (192)
T ss_pred CCeEEEEEcCCCCCCc---CccccC--CCcEEEEcCC-CcCCCCC-HHHHHHHHHHHHh
Confidence 3599999999765321 112222 6899999995 8876555 5666666666554
No 302
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=46.53 E-value=1.5e+02 Score=25.31 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=56.2
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCc---eecccccccCCCC-CCCHHHHHHHHHHHHHHcCCCceeEEeeChhH--
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKK---KIARNHGDSPHTD-VFSYAHLAEDVKYFLETESIAQADVLGHSMGG-- 90 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~---~v~~ghG~S~~~~-~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg-- 90 (256)
.|++++--.+- ..|..+-+.+-.+..- .+++.||...... ......-.+.+.-++..+.-.|++|||-|-==
T Consensus 214 apvfYvSnSPw--~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~Dp 291 (373)
T COG4850 214 APVFYVSNSPW--QLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYPDRKFVLVGDSGEHDP 291 (373)
T ss_pred CCeEEecCChh--HhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhCCCceEEEecCCCCcCH
Confidence 46777654332 2345555555543221 1267777432211 11223333445557777787899999988432
Q ss_pred HHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 91 RAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 91 ~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
-|=.+++.++|++|.++.+=|.++
T Consensus 292 eIYae~v~~fP~RIl~I~IRdvs~ 315 (373)
T COG4850 292 EIYAEMVRCFPNRILGIYIRDVSG 315 (373)
T ss_pred HHHHHHHHhCccceeeEeeeeccC
Confidence 344467789999999999877654
No 303
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=45.05 E-value=18 Score=26.14 Aligned_cols=25 Identities=32% Similarity=0.697 Sum_probs=18.6
Q ss_pred cceeccCCCCCCC-----CCCCEEEEcCCc
Q psy1055 2 SFKVADTETPVDP-----DTKPIIIMHGLL 26 (256)
Q Consensus 2 ~~~~~~~~~~~~~-----~~~~iv~lHG~~ 26 (256)
-|++.|...|+.| +...++|+||-.
T Consensus 38 rfR~~~~~lpGkPDiVl~~y~~viFvHGCF 67 (150)
T COG3727 38 RFRVQDKDLPGKPDIVLPKYRCVIFVHGCF 67 (150)
T ss_pred EEEecCCCCCCCCCEeecCceEEEEEeeee
Confidence 4888888877654 356799999963
No 304
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=44.83 E-value=24 Score=30.11 Aligned_cols=29 Identities=21% Similarity=0.092 Sum_probs=20.2
Q ss_pred HHHHHHcCCCc------eeEEeeChhHHHHHHHHH
Q psy1055 70 KYFLETESIAQ------ADVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 70 ~~~l~~l~~~~------~~lvGhS~Gg~ia~~~A~ 98 (256)
.+++...++.. ..++|||+|=+.|+..|-
T Consensus 109 ~~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 109 VEKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred HHHHHhcCCCcccccCCCeeeeccHHHHHHHHHhC
Confidence 34556666432 357999999998887773
No 305
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.35 E-value=19 Score=30.89 Aligned_cols=18 Identities=33% Similarity=0.261 Sum_probs=15.6
Q ss_pred eEEeeChhHHHHHHHHHh
Q psy1055 82 DVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~ 99 (256)
.+.|.|.||.||..+|..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 467999999999999864
No 306
>KOG2385|consensus
Probab=43.75 E-value=32 Score=31.06 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=26.5
Q ss_pred CCCceeEEeeChhHHHHHH----HHH-hCCCCcccEEEEeC
Q psy1055 77 SIAQADVLGHSMGGRAMMY----LAL-ANPHLVSSLIVVDI 112 (256)
Q Consensus 77 ~~~~~~lvGhS~Gg~ia~~----~A~-~~P~~v~~lil~~~ 112 (256)
|..+++|||+|+|+-+.+. +|- ..-..|.-++|.++
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~Ga 485 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGA 485 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccC
Confidence 6678999999999988763 232 23457888888874
No 307
>KOG1283|consensus
Probab=43.10 E-value=32 Score=29.15 Aligned_cols=64 Identities=17% Similarity=0.141 Sum_probs=44.3
Q ss_pred cccccc--CCCCCC--CHHHHHHHHHHHHHHc-------CCCceeEEeeChhHHHHHHHHHhC------C---CCcccEE
Q psy1055 49 RNHGDS--PHTDVF--SYAHLAEDVKYFLETE-------SIAQADVLGHSMGGRAMMYLALAN------P---HLVSSLI 108 (256)
Q Consensus 49 ~ghG~S--~~~~~~--s~~~~a~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~A~~~------P---~~v~~li 108 (256)
-|-|-| +....| +....|.|+.++++++ +-.+++|+--|.||-+|..+|..- - -.+.+++
T Consensus 81 VGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~Va 160 (414)
T KOG1283|consen 81 VGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVA 160 (414)
T ss_pred CcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEE
Confidence 466655 222333 5789999999999886 335799999999999988776532 2 2455667
Q ss_pred EEeC
Q psy1055 109 VVDI 112 (256)
Q Consensus 109 l~~~ 112 (256)
|-|+
T Consensus 161 LGDS 164 (414)
T KOG1283|consen 161 LGDS 164 (414)
T ss_pred ccCc
Confidence 6653
No 308
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=43.00 E-value=52 Score=20.28 Aligned_cols=34 Identities=18% Similarity=0.455 Sum_probs=27.2
Q ss_pred CCCCeEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 221 FPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 221 ~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
.|+..+... ++-+++-.|.++++.+.|.+|-+++
T Consensus 25 ~PDTvItL~-~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 25 TPDTVITLT-NGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred cCCeEEEEe-CCCEEEEECCHHHHHHHHHHHHHhc
Confidence 477555555 5688889999999999999998764
No 309
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=41.21 E-value=27 Score=38.23 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=24.8
Q ss_pred HHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 68 DVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 68 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
-+.++++..|+.+-.++|||+|=+.|+..|
T Consensus 663 Al~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 663 GQYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 345667888999999999999998887765
No 310
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=40.91 E-value=22 Score=29.47 Aligned_cols=19 Identities=32% Similarity=0.253 Sum_probs=16.6
Q ss_pred eEEeeChhHHHHHHHHHhC
Q psy1055 82 DVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~~~ 100 (256)
.++|.|.||.+|+.+|..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5789999999999998754
No 311
>PF03283 PAE: Pectinacetylesterase
Probab=40.34 E-value=82 Score=27.26 Aligned_cols=37 Identities=22% Similarity=0.127 Sum_probs=26.8
Q ss_pred CceeEEeeChhHHHHHHH----HHhCCCCcccEEEEeCCCC
Q psy1055 79 AQADVLGHSMGGRAMMYL----ALANPHLVSSLIVVDISPV 115 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~----A~~~P~~v~~lil~~~~~~ 115 (256)
++++|.|.|.||+-++.. +...|..++-..+.|++.+
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 579999999999887653 4467876666666675443
No 312
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=39.35 E-value=36 Score=25.42 Aligned_cols=22 Identities=27% Similarity=0.231 Sum_probs=17.1
Q ss_pred CceeEEeeChhHHHHHHHHHhC
Q psy1055 79 AQADVLGHSMGGRAMMYLALAN 100 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~A~~~ 100 (256)
.--.+.|-|.||.+|..++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3456889999999998888763
No 313
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=39.34 E-value=53 Score=29.72 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=28.8
Q ss_pred HHHHHHHHHHH-HHHcCCCceeEEee-ChhHHHHHHHHHh
Q psy1055 62 YAHLAEDVKYF-LETESIAQADVLGH-SMGGRAMMYLALA 99 (256)
Q Consensus 62 ~~~~a~dl~~~-l~~l~~~~~~lvGh-S~Gg~ia~~~A~~ 99 (256)
++.+++|+... .+.++..+..|+|| |-||.+|..++.+
T Consensus 383 Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 383 LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 58899999754 56677777778888 8899999888865
No 314
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=39.12 E-value=44 Score=25.52 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=9.9
Q ss_pred HHHHHHHHHHcCCCceeEEeeC
Q psy1055 66 AEDVKYFLETESIAQADVLGHS 87 (256)
Q Consensus 66 a~dl~~~l~~l~~~~~~lvGhS 87 (256)
.+.+..+++.....++.|.||.
T Consensus 88 L~~~a~~L~~~p~~~v~I~Ght 109 (173)
T PRK10802 88 LDAHANFLRSNPSYKVTVEGHA 109 (173)
T ss_pred HHHHHHHHHhCCCceEEEEEec
Confidence 3334444444443345555554
No 315
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=38.42 E-value=33 Score=20.10 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEe
Q psy1055 60 FSYAHLAEDVKYFLETESIAQADVLG 85 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~~~~lvG 85 (256)
++.+.|..|+-..|.++-|.++.++|
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEecc
Confidence 56788999999999999999999987
No 316
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=38.13 E-value=46 Score=22.62 Aligned_cols=57 Identities=14% Similarity=0.274 Sum_probs=34.4
Q ss_pred hcHHHHHHHHHhhcCcee-cccccccCCCCCCCH---HHHHHHHHHHHHHcCCCc--eeEEee
Q psy1055 30 NNWNSLAKAIHRKTKKKI-ARNHGDSPHTDVFSY---AHLAEDVKYFLETESIAQ--ADVLGH 86 (256)
Q Consensus 30 ~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~~~s~---~~~a~dl~~~l~~l~~~~--~~lvGh 86 (256)
.....+++.|.+.....| +.||-.+.....+++ ..-|+-+..++...|+++ +.++|+
T Consensus 17 ~~L~~~a~~l~~~~~~~i~I~Ghtd~~g~~~~N~~LS~~RA~~V~~~L~~~gi~~~ri~~~g~ 79 (104)
T TIGR02802 17 AILDAHAAYLKKNPSVRVTIEGHTDERGTREYNLALGERRANAVKDYLQAKGVSASQIETVSY 79 (104)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEee
Confidence 345666777776543334 888865543333443 357777888888888753 555554
No 317
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=37.30 E-value=41 Score=31.09 Aligned_cols=44 Identities=16% Similarity=0.307 Sum_probs=30.4
Q ss_pred CC-CCCeeEEecCCCCCccCCC-hhHHhhc---C----CCCeEEEecCCCccc
Q psy1055 193 TY-GGPTLFIGGGRSDFIRQED-HPGIKSL---F----PRAEITYIEDAGHWV 236 (256)
Q Consensus 193 ~i-~~P~lii~G~~D~~~~~~~-~~~~~~~---~----~~~~~~~i~~~GH~~ 236 (256)
++ ..|++|++|..|.++|... ++.+..+ . ...+++.++|+=|+=
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 44 6899999999999998754 3322222 2 234678889988875
No 318
>PRK01581 speE spermidine synthase; Validated
Probab=37.28 E-value=2.5e+02 Score=24.47 Aligned_cols=95 Identities=12% Similarity=0.075 Sum_probs=52.1
Q ss_pred CCCEEEEcCCccchhcHHHHHHHHH--h----------hcCcee---ccccc-------ccCCCCCCCHHHHHHHHHHHH
Q psy1055 16 TKPIIIMHGLLGSKNNWNSLAKAIH--R----------KTKKKI---ARNHG-------DSPHTDVFSYAHLAEDVKYFL 73 (256)
Q Consensus 16 ~~~iv~lHG~~~~~~~w~~~~~~l~--~----------~~~~~v---~~ghG-------~S~~~~~~s~~~~a~dl~~~l 73 (256)
...++++.-..++...|....-... . .|+.+. -.+++ .+....++.|..+.-.. .++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~S~yQ~I~I~et~~~~L~LDG~~Q~se~DE~iYHE~Lvhp-~m~ 146 (374)
T PRK01581 68 SENVVIVPTDSHNLDIWDEISLKEIQAGEHTNLFAEKSNYQNINLLQVSDIRLYLDKQLQFSSVDEQIYHEALVHP-IMS 146 (374)
T ss_pred ccceEEeecCCCchhhhhHHHHHHHhhcccCEEEecCCCCceEEEEEcCCEEEEECCeeccccccHHHHHHHHHHH-HHH
Confidence 4578888888888788876644433 1 122221 12222 22222222233332222 234
Q ss_pred HHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 74 ETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 74 ~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
.+.+-+++-++|-..|+ ++..++++| .+..+++++..+
T Consensus 147 ~h~~PkrVLIIGgGdG~--tlrelLk~~-~v~~It~VEIDp 184 (374)
T PRK01581 147 KVIDPKRVLILGGGDGL--ALREVLKYE-TVLHVDLVDLDG 184 (374)
T ss_pred hCCCCCEEEEECCCHHH--HHHHHHhcC-CCCeEEEEeCCH
Confidence 45566789999966555 445555676 378899988654
No 319
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=37.19 E-value=89 Score=24.00 Aligned_cols=52 Identities=23% Similarity=0.410 Sum_probs=32.2
Q ss_pred HHHHHHHhhcC-ceecccccccCCCCCCCH---HHHHHHHHHHHHHcCCC--ceeEEe
Q psy1055 34 SLAKAIHRKTK-KKIARNHGDSPHTDVFSY---AHLAEDVKYFLETESIA--QADVLG 85 (256)
Q Consensus 34 ~~~~~l~~~~~-~~v~~ghG~S~~~~~~s~---~~~a~dl~~~l~~l~~~--~~~lvG 85 (256)
.++..|.+.-. .++..||-+|.....|+. +.-|+-|...|...|+. ++..+|
T Consensus 104 ~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~~i~~~G 161 (190)
T COG2885 104 ELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVADRISTVG 161 (190)
T ss_pred HHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcccEEEEE
Confidence 34444544322 233788888877766764 56778888888877764 345555
No 320
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=37.18 E-value=75 Score=19.78 Aligned_cols=46 Identities=20% Similarity=0.484 Sum_probs=33.5
Q ss_pred CccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHHhhc
Q psy1055 208 FIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255 (256)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 255 (256)
++.+...+.+ +.+|+..+.++. +--++-.|.-+++.+.|.+|-+++
T Consensus 13 ~lN~~~IE~i-e~~PDttItLin-GkkyvVkEsveEVi~kI~~y~rkI 58 (67)
T COG1582 13 WLNAHHIETI-EAFPDTTITLIN-GKKYVVKESVEEVINKIIEYRRKI 58 (67)
T ss_pred eeCHHHhhhh-hccCCcEEEEEc-CcEEEEcccHHHHHHHHHHHHHHh
Confidence 3444334444 346888888885 577888888999999999998763
No 321
>KOG2214|consensus
Probab=35.53 E-value=17 Score=32.59 Aligned_cols=43 Identities=14% Similarity=0.212 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 66 a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
..-+..++++ ++=+=+|.|-|+||.||..++.+.-|.++++.-
T Consensus 190 ~GVlrtL~e~-dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll~ 232 (543)
T KOG2214|consen 190 IGVLRTLLEQ-DLLPNIISGSSAGAIVASLVGVRSNEELKQLLT 232 (543)
T ss_pred HHHHHHHHHc-cccchhhcCCchhHHHHHHHhhcchHHHHHHhc
Confidence 3445555555 444556899999999999999998887888763
No 322
>KOG1283|consensus
Probab=34.86 E-value=23 Score=30.02 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=29.3
Q ss_pred hhcCCCCeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 218 KSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 218 ~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
.+...+..+..++.+||+.+-|+|+.....++.+.+
T Consensus 377 ~ktyknl~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 377 EKTYKNLSFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred hhhhccceeEEeecccCcccCCCHHHHhhheeeccc
Confidence 334467888999999999999999998888776543
No 323
>PRK07877 hypothetical protein; Provisional
Probab=34.36 E-value=58 Score=31.05 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=29.7
Q ss_pred HHHcCCCceeEEeeChhHHHHHHHHHhCCCCc-ccEEEEeC
Q psy1055 73 LETESIAQADVLGHSMGGRAMMYLALANPHLV-SSLIVVDI 112 (256)
Q Consensus 73 l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v-~~lil~~~ 112 (256)
.+.|.-.++.|+|-+.|+.++..+|.. .| ..++++|-
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~Lara---GvvG~l~lvD~ 139 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAE---GLCGELRLADF 139 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHc---cCCCeEEEEcC
Confidence 444556789999999999999999876 34 88999883
No 324
>PRK04148 hypothetical protein; Provisional
Probab=33.85 E-value=1e+02 Score=22.47 Aligned_cols=32 Identities=22% Similarity=0.137 Sum_probs=24.3
Q ss_pred CceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 79 AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 79 ~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
.++..||--.|..+|..++.. =..++.+|..+
T Consensus 18 ~kileIG~GfG~~vA~~L~~~----G~~ViaIDi~~ 49 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES----GFDVIVIDINE 49 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC----CCEEEEEECCH
Confidence 568889999888899888844 24677888655
No 325
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.54 E-value=50 Score=23.36 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=31.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHH
Q psy1055 48 ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMM 94 (256)
Q Consensus 48 ~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 94 (256)
.|.-|..-..+ ..+....|.--+..++.+.+.++|||--|++..
T Consensus 31 ~Rn~Gn~v~~~---~~~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 31 VRNAGNLVPPY---DLDVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred EeccCCcCCCC---cccHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 66666432211 234556677778899999999999998887765
No 326
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=33.46 E-value=95 Score=26.45 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=46.0
Q ss_pred EEEcCCccchhcHHHHHHHHHhh---cCceecccccccC-----------------CCCCCCHHHHHHHHHHHHHHcC-C
Q psy1055 20 IIMHGLLGSKNNWNSLAKAIHRK---TKKKIARNHGDSP-----------------HTDVFSYAHLAEDVKYFLETES-I 78 (256)
Q Consensus 20 v~lHG~~~~~~~w~~~~~~l~~~---~~~~v~~ghG~S~-----------------~~~~~s~~~~a~dl~~~l~~l~-~ 78 (256)
|+++|+|+-...-..+++.+-.. +.+++..|+-.+- ....-+..+.++.|...++... .
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 67888887766666666665444 4444566663221 0111246667777777777765 5
Q ss_pred CceeEEeeChhHHH
Q psy1055 79 AQADVLGHSMGGRA 92 (256)
Q Consensus 79 ~~~~lvGhS~Gg~i 92 (256)
.+++||=|++=|--
T Consensus 137 ~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 137 PPLYLVIHNIDGPS 150 (326)
T ss_pred CceEEEEECCCChh
Confidence 68999999987755
No 327
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=33.03 E-value=3e+02 Score=24.13 Aligned_cols=79 Identities=19% Similarity=0.291 Sum_probs=51.2
Q ss_pred CEEEEcCCcc-------chhcHHHHHHHHHhhcCcee----cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEee
Q psy1055 18 PIIIMHGLLG-------SKNNWNSLAKAIHRKTKKKI----ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGH 86 (256)
Q Consensus 18 ~iv~lHG~~~-------~~~~w~~~~~~l~~~~~~~v----~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGh 86 (256)
.||+|||-.- +...|..+++.++++....+ +-|+|.- ++.-+.-|-.+++. .+-.+|..
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-------leeDa~~lR~~a~~---~~~~lva~ 242 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-------LEEDAYALRLFAEV---GPELLVAS 242 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-------hHHHHHHHHHHHHh---CCcEEEEe
Confidence 5999998643 45689999999998753222 5676621 33333344444443 22378888
Q ss_pred ChhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 87 SMGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 87 S~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
|.-=..+ .|-|||-+++++.
T Consensus 243 S~SKnfg-----LYgERVGa~~vva 262 (396)
T COG1448 243 SFSKNFG-----LYGERVGALSVVA 262 (396)
T ss_pred hhhhhhh-----hhhhccceeEEEe
Confidence 8765544 5789999999874
No 328
>PRK05309 30S ribosomal protein S11; Validated
Probab=32.73 E-value=1.3e+02 Score=21.74 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=41.9
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEE--eeChhHHHHHHHHHhCCCCcccEEEEeCCCC
Q psy1055 50 NHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVL--GHSMGGRAMMYLALANPHLVSSLIVVDISPV 115 (256)
Q Consensus 50 ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lv--GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~ 115 (256)
|+..+.+...|.....++.+...+.++|+..+.|+ |..-|...++..-....-.|. -+.|.+|.
T Consensus 50 gfKg~rK~T~~Aa~~aa~~~~~~~~~~gi~~v~v~ikG~G~Gr~~air~L~~~glkI~--~I~D~Tpi 115 (128)
T PRK05309 50 GFKGSRKSTPYAAQVAAEDAAKKAKEHGMKTVEVFVKGPGSGRESAIRALQAAGLEVT--SIKDVTPI 115 (128)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEE--EEEEcCCC
Confidence 44445444456678889999999999999876654 888888777665544433332 33455554
No 329
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=32.65 E-value=2e+02 Score=23.78 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=44.9
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC-cee-----cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeE-Eee
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-KKI-----ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADV-LGH 86 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-~~v-----~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~l-vGh 86 (256)
..+.||+|--|.+.+...|-.-++++..+++ .+| .|+|-.+.+ ++++--+ ..+++++..=++++ +-|
T Consensus 150 ~~~kPvLLKRg~~aTieEwL~AAEYI~s~GN~~vILCERGIRtfe~~TR---ntLDi~a---V~~~kq~THLPVivDpSH 223 (286)
T COG2876 150 RQNKPVLLKRGLSATIEEWLNAAEYILSHGNGNVILCERGIRTFEKATR---NTLDISA---VPILKQETHLPVIVDPSH 223 (286)
T ss_pred ccCCCeEEecCccccHHHHHHHHHHHHhCCCCcEEEEeccccccccccc---ceechHH---HHHHHhhcCCCEEECCCC
Confidence 4578999999999999999999999876654 344 345554433 3433222 22444443333443 578
Q ss_pred ChhH
Q psy1055 87 SMGG 90 (256)
Q Consensus 87 S~Gg 90 (256)
++|=
T Consensus 224 ~~Gr 227 (286)
T COG2876 224 ATGR 227 (286)
T ss_pred cccc
Confidence 8775
No 330
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=32.63 E-value=1.5e+02 Score=26.07 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=22.9
Q ss_pred CEEEEcCCccchhc--HHHHHHHHHhhcCcee
Q psy1055 18 PIIIMHGLLGSKNN--WNSLAKAIHRKTKKKI 47 (256)
Q Consensus 18 ~iv~lHG~~~~~~~--w~~~~~~l~~~~~~~v 47 (256)
-|++|.|+|++... .+...+.+++++.+++
T Consensus 37 IvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~ 68 (403)
T PF11144_consen 37 IVFIIPGFGADANSNYLDFMREYIAKKFNVVV 68 (403)
T ss_pred EEEEeCCcCCCcchHHHHHHHHHHHHhCCEEE
Confidence 46669999997764 5678889999877654
No 331
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=32.20 E-value=44 Score=26.63 Aligned_cols=25 Identities=12% Similarity=0.302 Sum_probs=20.6
Q ss_pred CCCeeEEecCCCCCccCCChhHHhh
Q psy1055 195 GGPTLFIGGGRSDFIRQEDHPGIKS 219 (256)
Q Consensus 195 ~~P~lii~G~~D~~~~~~~~~~~~~ 219 (256)
..|+++++|+.|..+.+.+.+.+.+
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~ 193 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVA 193 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHH
Confidence 4699999999999999888776543
No 332
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.84 E-value=71 Score=25.91 Aligned_cols=17 Identities=41% Similarity=0.565 Sum_probs=15.5
Q ss_pred EEeeChhHHHHHHHHHh
Q psy1055 83 VLGHSMGGRAMMYLALA 99 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~ 99 (256)
++|.|-||.+|+.++..
T Consensus 38 i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 38 IAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeccHHHHHHHHHhcC
Confidence 68999999999999876
No 333
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=31.32 E-value=2.8e+02 Score=23.53 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=50.1
Q ss_pred CCCCCCCEEEEcCCc----cchhc-HHHHHHHHHhhcCce-e--cccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeE
Q psy1055 12 VDPDTKPIIIMHGLL----GSKNN-WNSLAKAIHRKTKKK-I--ARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADV 83 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~----~~~~~-w~~~~~~l~~~~~~~-v--~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~l 83 (256)
.+-+..|||+-|... .+.++ =+.+++++.+.+..+ + .+.+=.......-|++++++.|..+++-.|++.+ -
T Consensus 179 l~~s~~PviaSHSN~~al~~h~RNl~D~qlkaI~~~gGvIgv~~~~~fl~~~~~~~atldd~v~hI~h~v~~~G~dhV-g 257 (313)
T COG2355 179 LDLSKAPVVASHSNARALVDHPRNLSDEQLKAIAETGGVIGVNFIPAFLRPGGAARATLDDLVRHIDHFVELVGIDHV-G 257 (313)
T ss_pred HhccCCceEEecCCchhccCCCCCCCHHHHHHHHhcCCEEEEEeehhhccCCCCCCCCHHHHHHHHHHHHHhcCccee-E
Confidence 344678999999774 33444 477999999886644 2 2222111012335899999999999999997754 4
Q ss_pred EeeCh
Q psy1055 84 LGHSM 88 (256)
Q Consensus 84 vGhS~ 88 (256)
+|..+
T Consensus 258 lGsDf 262 (313)
T COG2355 258 LGSDF 262 (313)
T ss_pred ecccc
Confidence 55544
No 334
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=31.14 E-value=68 Score=27.92 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=16.6
Q ss_pred eeEEeeChhHHHHHHHHHh
Q psy1055 81 ADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 81 ~~lvGhS~Gg~ia~~~A~~ 99 (256)
-.++|-|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4589999999999999875
No 335
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=30.85 E-value=3.2e+02 Score=22.81 Aligned_cols=16 Identities=13% Similarity=-0.037 Sum_probs=11.4
Q ss_pred CCceeEEeeChhHHHH
Q psy1055 78 IAQADVLGHSMGGRAM 93 (256)
Q Consensus 78 ~~~~~lvGhS~Gg~ia 93 (256)
+...+++|+|-=.++.
T Consensus 210 lg~Pilvg~SRKsfig 225 (282)
T PRK11613 210 FNLPLLVGMSRKSMIG 225 (282)
T ss_pred CCCCEEEEecccHHHH
Confidence 3567899999666554
No 336
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.72 E-value=53 Score=27.08 Aligned_cols=44 Identities=20% Similarity=0.142 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 66 a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
|.-|.+|+....+.=-.++|.|+|+.-...|-.+-|.+-+++++
T Consensus 27 AGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 27 AGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 45566777555433234689999999999999999988888775
No 337
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=30.16 E-value=2e+02 Score=23.00 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=32.8
Q ss_pred HHHHHHHHhhcC-ceecc--cccccCCC----CC--C---CHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 33 NSLAKAIHRKTK-KKIAR--NHGDSPHT----DV--F---SYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 33 ~~~~~~l~~~~~-~~v~~--ghG~S~~~----~~--~---s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
..++.+++++.. .+++| -+|-|... .. . ++..+..|+..-+.+.|.++++||..--|=.-++..+
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~ 119 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIPYGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAA 119 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B--BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCCccccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHH
Confidence 456777777665 55533 35554331 11 2 3566677777777777999988874444422234443
No 338
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=29.80 E-value=1.2e+02 Score=24.89 Aligned_cols=49 Identities=16% Similarity=0.117 Sum_probs=32.9
Q ss_pred CCCCCeeEEecCCCC---------CccC-CChhHHhhcCC-CCeEEEecCCCccccccCc
Q psy1055 193 TYGGPTLFIGGGRSD---------FIRQ-EDHPGIKSLFP-RAEITYIEDAGHWVHSQKP 241 (256)
Q Consensus 193 ~i~~P~lii~G~~D~---------~~~~-~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~p 241 (256)
+.++|+++|..+-+. ..|. ...+++-+..+ .+-..++.+.||+=+++..
T Consensus 152 ~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 152 DFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 456999999877663 2222 23555544443 4555677899999999987
No 339
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=29.68 E-value=91 Score=23.44 Aligned_cols=58 Identities=12% Similarity=0.069 Sum_probs=43.0
Q ss_pred CCeeEEecCCCCCccCCChhHHhhcCCCCeEEEecCCCccccccCchHHHHHHHHHHh
Q psy1055 196 GPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 196 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~ 253 (256)
.-++++...-|.-.+.+.++.+.+.+.+.++.+|-.+|..+.-++-..+.+.+..++.
T Consensus 40 yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~ 97 (160)
T PF12641_consen 40 YDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLP 97 (160)
T ss_pred CCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhc
Confidence 4577777666655454556665555788899999999998888888888888887775
No 340
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=29.54 E-value=3.4e+02 Score=22.82 Aligned_cols=67 Identities=6% Similarity=0.101 Sum_probs=43.6
Q ss_pred CCEEEEcCCccchhcHHHHHHHHHhhcCcee-------cccc----ccc----------------CCCCCCCHHHHHHHH
Q psy1055 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI-------ARNH----GDS----------------PHTDVFSYAHLAEDV 69 (256)
Q Consensus 17 ~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v-------~~gh----G~S----------------~~~~~~s~~~~a~dl 69 (256)
++||+|-|-+++..+ .++-.|+++...+| ++|. .+- +....||..++.++.
T Consensus 4 ~~ii~I~GpTasGKS--~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKS--NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHH--HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 469999999988765 56666776643344 4443 211 112347889999999
Q ss_pred HHHHHHc--CCCceeEEe
Q psy1055 70 KYFLETE--SIAQADVLG 85 (256)
Q Consensus 70 ~~~l~~l--~~~~~~lvG 85 (256)
...++.. ..+..+|||
T Consensus 82 ~~~i~~i~~~gk~PilvG 99 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVG 99 (300)
T ss_pred HHHHHHHHHCCCCEEEEe
Confidence 9999876 234467777
No 341
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=29.32 E-value=2.7e+02 Score=21.53 Aligned_cols=59 Identities=3% Similarity=-0.018 Sum_probs=36.8
Q ss_pred CCCCEEEEcCCccchhcHH-----HHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHH-HHHHHcCCCc
Q psy1055 15 DTKPIIIMHGLLGSKNNWN-----SLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVK-YFLETESIAQ 80 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~-----~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~-~~l~~l~~~~ 80 (256)
.+.|+++.. ..+|. ..+..|++.+..++-+.-|.=. .+-|++++++.+. .+++.+|++.
T Consensus 114 ~~~pvii~P-----~~M~~~p~~~~Nl~~L~~~G~~vi~P~~g~~a--~p~~~~~~~~~~v~~~~~~l~~~~ 178 (185)
T PRK06029 114 ERRRLVLCV-----RETPLHLGHLRNMTKLAEMGAIIMPPVPAFYH--RPQTLEDMVDQTVGRVLDLFGIEH 178 (185)
T ss_pred cCCCEEEEe-----ccccCCHHHHHHHHHHHHCcCEEECCCccccc--CCCCHHHHHHHHHHHHHHhcCCCC
Confidence 356777777 25663 4566777765445533333211 2247899988887 5889998863
No 342
>PLN02748 tRNA dimethylallyltransferase
Probab=29.18 E-value=4.1e+02 Score=24.01 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=43.8
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC-cee-------cccc----ccc----------------CCCCCCCHHHH
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-KKI-------ARNH----GDS----------------PHTDVFSYAHL 65 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-~~v-------~~gh----G~S----------------~~~~~~s~~~~ 65 (256)
...+++|+|-|-+++..+ .++-.|++.+. .+| ++|. .+- +....||..++
T Consensus 19 ~~~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 445579999999887654 55566666543 223 3332 111 11234889999
Q ss_pred HHHHHHHHHHc--CCCceeEEe
Q psy1055 66 AEDVKYFLETE--SIAQADVLG 85 (256)
Q Consensus 66 a~dl~~~l~~l--~~~~~~lvG 85 (256)
.++....|+.+ ..+-.+|||
T Consensus 97 ~~~A~~~I~~I~~rgk~PIlVG 118 (468)
T PLN02748 97 RDHAVPLIEEILSRNGLPVIVG 118 (468)
T ss_pred HHHHHHHHHHHHhcCCCeEEEc
Confidence 99999999876 224466776
No 343
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=28.84 E-value=85 Score=26.12 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCC
Q psy1055 61 SYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDIS 113 (256)
Q Consensus 61 s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~ 113 (256)
.+..++..+.-+. +-+.+++.++|-..||.+ ...++|++ +.+++++++-
T Consensus 61 ~yhEml~h~~~~a-h~~pk~VLiiGgGdG~tl--Revlkh~~-ve~i~~VEID 109 (282)
T COG0421 61 IYHEMLAHVPLLA-HPNPKRVLIIGGGDGGTL--REVLKHLP-VERITMVEID 109 (282)
T ss_pred HHHHHHHhchhhh-CCCCCeEEEECCCccHHH--HHHHhcCC-cceEEEEEcC
Confidence 3444443333222 223368999998888864 56677887 9999998853
No 344
>KOG2170|consensus
Probab=28.79 E-value=52 Score=27.72 Aligned_cols=31 Identities=23% Similarity=0.491 Sum_probs=19.5
Q ss_pred CCCCCCCCCEEEEcCCccchhcHHHHHHHHHhh
Q psy1055 10 TPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRK 42 (256)
Q Consensus 10 ~~~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~ 42 (256)
....+.+|-++=+||++|...++ +++.++++
T Consensus 103 ~n~~p~KPLvLSfHG~tGTGKN~--Va~iiA~n 133 (344)
T KOG2170|consen 103 ANPNPRKPLVLSFHGWTGTGKNY--VAEIIAEN 133 (344)
T ss_pred cCCCCCCCeEEEecCCCCCchhH--HHHHHHHH
Confidence 33445555566699999988764 34445544
No 345
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.97 E-value=37 Score=28.47 Aligned_cols=17 Identities=29% Similarity=0.329 Sum_probs=14.6
Q ss_pred eEEeeChhHHHHHHHHH
Q psy1055 82 DVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~ 98 (256)
.++|.|.||.||+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 46799999999998873
No 346
>PF09754 PAC2: PAC2 family; InterPro: IPR019151 This PAC2 (Proteasome assembly chaperone) family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 247 and 307 amino acids in length. These proteins function as a chaperone for the 26S proteasome, which is about 2000 kilodaltons (kDa) in molecular mass and contains one 20S core particle structure and two 19S regulatory caps. The 26S proteasome mediates ubiquitin-dependent proteolysis in eukaryotic cells. A number of studies including very recent ones have revealed that assembly of its 20S catalytic core particle is an ordered process that involves several conserved proteasome assembly chaperones (PACs). Two heterodimeric chaperones, PAC1-PAC2 and PAC3-PAC4, promote the assembly of rings composed of seven alpha subunits [, , , ].; PDB: 3MNF_A 2P90_B 3E35_A 3GAA_D 2WAM_C.
Probab=27.91 E-value=65 Score=25.30 Aligned_cols=26 Identities=19% Similarity=0.319 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEe
Q psy1055 60 FSYAHLAEDVKYFLETESIAQADVLG 85 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~~~~lvG 85 (256)
..+..+++++..++++.+.++++++|
T Consensus 81 ~~~~~f~~~l~~~~~~~g~~~vi~l~ 106 (219)
T PF09754_consen 81 GRWYEFAEELLDWIKSFGVKEVIVLG 106 (219)
T ss_dssp CGHHHHHHHHHHHHHHTTECEEEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 45899999999999999999988776
No 347
>CHL00041 rps11 ribosomal protein S11
Probab=27.54 E-value=2.3e+02 Score=20.06 Aligned_cols=64 Identities=17% Similarity=0.267 Sum_probs=41.1
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEE--eeChhHHHHHHHHHhCCCCcccEEEEeCCCC
Q psy1055 50 NHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVL--GHSMGGRAMMYLALANPHLVSSLIVVDISPV 115 (256)
Q Consensus 50 ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lv--GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~ 115 (256)
|+-.+.+...|.....++.+...+.++|+..++++ |...|.-.++..-.+..-.|.+ +.|.+|.
T Consensus 46 gfKg~rK~T~~Aa~~~a~~~~~~~~~~gi~~v~I~ikG~G~Gr~~~ir~l~~~glkI~~--I~D~Tpi 111 (116)
T CHL00041 46 GFKGARKGTPFAAQTAAENAIRTVIDQGMKRAEVMIKGPGLGRDTALRAIRRSGLKLSS--IRDVTPM 111 (116)
T ss_pred eeCCCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEE--EEEcCCC
Confidence 44445444456678889999999999999986654 7777887776554443333333 3355553
No 348
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=27.52 E-value=42 Score=28.84 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=16.2
Q ss_pred EEeeChhHHHHHHHHHhCC
Q psy1055 83 VLGHSMGGRAMMYLALANP 101 (256)
Q Consensus 83 lvGhS~Gg~ia~~~A~~~P 101 (256)
++|.|-||.+|+.+|...+
T Consensus 47 iaGTStGgiiA~~la~~~~ 65 (349)
T cd07214 47 IAGTSTGGLITAMLTAPNE 65 (349)
T ss_pred EeeCCHHHHHHHHHhcCCC
Confidence 6799999999999997543
No 349
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=27.02 E-value=1.2e+02 Score=26.83 Aligned_cols=46 Identities=13% Similarity=0.153 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 66 a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
+..+.+.++....+++.+|| ||.+++++|...-..-..+.++...+
T Consensus 136 ~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~~~ 181 (438)
T PRK13512 136 TDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHRSD 181 (438)
T ss_pred HHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEeccc
Confidence 34444555444457899999 88999998876555556788876443
No 350
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=25.72 E-value=3.6e+02 Score=22.44 Aligned_cols=64 Identities=9% Similarity=0.087 Sum_probs=43.4
Q ss_pred CEEEEcCCcc-----chhcHHHHHHHHHhhcCcee-ccc-ccccCCCCCCCHHHHHHHHHHHHHHcCCCceeE
Q psy1055 18 PIIIMHGLLG-----SKNNWNSLAKAIHRKTKKKI-ARN-HGDSPHTDVFSYAHLAEDVKYFLETESIAQADV 83 (256)
Q Consensus 18 ~iv~lHG~~~-----~~~~w~~~~~~l~~~~~~~v-~~g-hG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~l 83 (256)
++|+=|...- .-.-|..-...|++..+..+ +.| ++-|+.. .++++...-+..+++.++.+++++
T Consensus 163 ~~VldH~G~p~~~~~~~~~w~~~m~~la~~pNv~~KlSG~~~~~~~~--w~~~~v~p~~e~~i~~fg~dR~vf 233 (279)
T COG3618 163 NFVLDHCGRPDIKINLEDPWKAALARLARRPNVWAKLSGVYAYSDES--WTVEDVRPYVEELIELFGWDRFVF 233 (279)
T ss_pred CEEeccCCCCCccccccCHHHHHHHHHHhCCCeEEEEeeecccccCC--CCHHHHHHHHHHHHHhcCccceEe
Confidence 6888885532 23447777777777655445 777 4434333 678888888888899999888744
No 351
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=25.61 E-value=1.7e+02 Score=21.38 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
..+....|.--+..++++.++++|||-=|++...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 456667777788999999999999999888885544
No 352
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.14 E-value=3.5e+02 Score=22.12 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=30.5
Q ss_pred CCCCCEEEEcCCccchhcHHHHHHHHHhhcC-cee--cccc
Q psy1055 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK-KKI--ARNH 51 (256)
Q Consensus 14 ~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~-~~v--~~gh 51 (256)
..+.||++=-|...+...|...++.+.+.+. .++ -||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 5688999999999999999999999987655 343 4554
No 353
>KOG3079|consensus
Probab=24.63 E-value=1.3e+02 Score=23.35 Aligned_cols=31 Identities=29% Similarity=0.319 Sum_probs=23.0
Q ss_pred CCCCCCCEEEEcCCccchhcHHHHHHHHHhhcC
Q psy1055 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTK 44 (256)
Q Consensus 12 ~~~~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~ 44 (256)
...+.+||||+=|.+|+..- .+...+.++|.
T Consensus 3 ~~~~~~~IifVlGGPGsgKg--TqC~kiv~ky~ 33 (195)
T KOG3079|consen 3 PKLDKPPIIFVLGGPGSGKG--TQCEKIVEKYG 33 (195)
T ss_pred CcccCCCEEEEEcCCCCCcc--hHHHHHHHHcC
Confidence 44568999999999998654 56666666654
No 354
>PRK07451 translation initiation factor Sui1; Validated
Probab=24.62 E-value=2.4e+02 Score=20.00 Aligned_cols=59 Identities=10% Similarity=0.183 Sum_probs=41.2
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCceecccccccCCCCCCCH-HHHHHHHHHHHHHcCCC
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSY-AHLAEDVKYFLETESIA 79 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~-~~~a~dl~~~l~~l~~~ 79 (256)
.+..|..|-|+.........++..|... -|.|.|-.....-+ -++.+.|.++|...|..
T Consensus 50 ~GK~VTvV~Gl~~~~~dlk~LaK~LK~k------~gcGGtvkd~~IelQGD~r~~v~~~L~~~Gf~ 109 (115)
T PRK07451 50 KGKTVTVITGFQHKPETLAKLLKQLKTQ------CGSGGTVKDNTIEIQGDHRQKILEILIKLGYK 109 (115)
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHH------hcCCceEcCCEEEEcCcHHHHHHHHHHHCCCe
Confidence 4568999999988766677777777754 35555543333333 36778899999998864
No 355
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=24.34 E-value=71 Score=16.46 Aligned_cols=10 Identities=30% Similarity=0.318 Sum_probs=6.9
Q ss_pred HHHHhCCCCc
Q psy1055 95 YLALANPHLV 104 (256)
Q Consensus 95 ~~A~~~P~~v 104 (256)
.+|+.+||++
T Consensus 20 ~~ALlrPErF 29 (29)
T PRK14759 20 TYALLRPERF 29 (29)
T ss_pred HHHHhCcccC
Confidence 4577888864
No 356
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.30 E-value=53 Score=27.89 Aligned_cols=17 Identities=29% Similarity=0.227 Sum_probs=14.5
Q ss_pred eEEeeChhHHHHHHHHH
Q psy1055 82 DVLGHSMGGRAMMYLAL 98 (256)
Q Consensus 82 ~lvGhS~Gg~ia~~~A~ 98 (256)
.++|.|-||.||+.+++
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 46799999999988764
No 357
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=24.25 E-value=62 Score=28.18 Aligned_cols=50 Identities=24% Similarity=0.254 Sum_probs=26.9
Q ss_pred CCCCCeeEEecCCCCCccCCChhHHhhc---CCCCeEEEecCCCccccccCchHH
Q psy1055 193 TYGGPTLFIGGGRSDFIRQEDHPGIKSL---FPRAEITYIEDAGHWVHSQKPDLF 244 (256)
Q Consensus 193 ~i~~P~lii~G~~D~~~~~~~~~~~~~~---~~~~~~~~i~~~GH~~~~e~p~~~ 244 (256)
.+++|+|+|..+. +........+.+. -++..+..+.|++|..+-|-|-.+
T Consensus 272 ~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~ 324 (379)
T PF03403_consen 272 KIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLS 324 (379)
T ss_dssp G--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS
T ss_pred CCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhh
Confidence 6789999998764 3222223334332 256788999999998876655443
No 358
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=24.01 E-value=83 Score=24.36 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeCh
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSM 88 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~ 88 (256)
++.++.-+..++++.++....|+|||-
T Consensus 132 ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 456777777888888887788999974
No 359
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.66 E-value=98 Score=22.63 Aligned_cols=31 Identities=10% Similarity=-0.010 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHcCCCceeEEeeChhHHHHH
Q psy1055 64 HLAEDVKYFLETESIAQADVLGHSMGGRAMM 94 (256)
Q Consensus 64 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 94 (256)
+....|.--+..++.+.++++||+-=|++..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 4456677778889999999999987665543
No 360
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=23.66 E-value=2e+02 Score=24.04 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=34.1
Q ss_pred CH-HHHHHHHHHHHHHcCCCc---eeEEeeChhHHHHHHHHHhCCCCcccEEE
Q psy1055 61 SY-AHLAEDVKYFLETESIAQ---ADVLGHSMGGRAMMYLALANPHLVSSLIV 109 (256)
Q Consensus 61 s~-~~~a~dl~~~l~~l~~~~---~~lvGhS~Gg~ia~~~A~~~P~~v~~lil 109 (256)
++ +....-+..+++++++++ +-=||..|||+.. .+|.+|-..|.++.+
T Consensus 52 tL~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~~-~aA~~y~v~V~GvTl 103 (283)
T COG2230 52 TLEEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLAI-YAAEEYGVTVVGVTL 103 (283)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHHH-HHHHHcCCEEEEeeC
Confidence 45 345566777889998864 3338999999765 566677677777776
No 361
>PRK06193 hypothetical protein; Provisional
Probab=23.39 E-value=3.7e+02 Score=21.17 Aligned_cols=52 Identities=15% Similarity=0.071 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHHHHHHcC--CCceeEEeeChhHHHHHHHHHhCCCCcccEEEEeCCC
Q psy1055 60 FSYAHLAEDVKYFLETES--IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~lil~~~~~ 114 (256)
.+.+.+.+++..+++.+. .+++.+|||..+ ...++...|+.....+++.+.+
T Consensus 135 ~~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp~---i~~l~g~~~~~~g~~~~~~~~~ 188 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPDPGTNTVLVGHDDN---LEAATGIYPEPEGEAAVFEPLG 188 (206)
T ss_pred hhHHHHHHHHHHHHhhCCCCCCeEEEEeCchH---HHHHhCCCCccCccEEEEEeCC
Confidence 456667789999999873 467999999942 2233334444344455555433
No 362
>PRK07281 methionine aminopeptidase; Reviewed
Probab=23.17 E-value=98 Score=25.76 Aligned_cols=30 Identities=17% Similarity=0.440 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCce-eEEeeChh
Q psy1055 60 FSYAHLAEDVKYFLETESIAQA-DVLGHSMG 89 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~~~-~lvGhS~G 89 (256)
-+..+..+.+.++++..+...+ +.+||++|
T Consensus 172 ~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG 202 (286)
T PRK07281 172 NRIGDIGAAIQEYAESRGYGVVRDLVGHGVG 202 (286)
T ss_pred CcHHHHHHHHHHHHHHcCCccCCCeeeeeCC
Confidence 3566666667777777777653 67999999
No 363
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase). Methanococcus jannaschii sulfopyruvate decarboxylase (ComDE) is a dodecamer of six alpha (D) subunits and six (E) beta subunits which, catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde in the coenzyme M pathway. Ppyr decarboxylase is a homotrimeric enzyme which functions in the biosynthesis of C-P compounds such as bialaphos tripeptide in Streptomyces hygroscopicus. Ppyr decarboxylase and ComDE require TPP and divalent metal cation cofactors.
Probab=23.13 E-value=1.7e+02 Score=21.70 Aligned_cols=18 Identities=0% Similarity=-0.073 Sum_probs=13.7
Q ss_pred ccccCchHHHHHHHHHHh
Q psy1055 236 VHSQKPDLFVDKVVDFYR 253 (256)
Q Consensus 236 ~~~e~p~~~~~~i~~fl~ 253 (256)
...+.++++.+.+.+.++
T Consensus 126 ~~v~~~~el~~al~~a~~ 143 (157)
T cd02001 126 LSAPLLGGLGSEFAGLLA 143 (157)
T ss_pred EEcCCHHHHHHHHHHHHh
Confidence 355779999888888765
No 364
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.07 E-value=1.5e+02 Score=24.95 Aligned_cols=43 Identities=28% Similarity=0.281 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHcCC----CceeEEeeC--hhHHHHHHHHHhCCCCcccEEEEe
Q psy1055 65 LAEDVKYFLETESI----AQADVLGHS--MGGRAMMYLALANPHLVSSLIVVD 111 (256)
Q Consensus 65 ~a~dl~~~l~~l~~----~~~~lvGhS--~Gg~ia~~~A~~~P~~v~~lil~~ 111 (256)
.+.-+.+++++.++ +++.+||.| ||--++..+..+. ..+++.+
T Consensus 142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g----atVtv~~ 190 (301)
T PRK14194 142 TPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH----CSVTVVH 190 (301)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC----CEEEEEC
Confidence 35678888988765 479999997 9999998887542 3455543
No 365
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.07 E-value=1.1e+02 Score=23.51 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 65 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
...-|..-+..|+.+.++++|||-=|++...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 445666777889999999999999888876654
No 366
>PRK10236 hypothetical protein; Provisional
Probab=22.96 E-value=75 Score=25.59 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=20.7
Q ss_pred cCC-ccchhcHHHHHHHHHhhcCcee---cccccc
Q psy1055 23 HGL-LGSKNNWNSLAKAIHRKTKKKI---ARNHGD 53 (256)
Q Consensus 23 HG~-~~~~~~w~~~~~~l~~~~~~~v---~~ghG~ 53 (256)
+|. +....+|..++.+|...+..-+ +||+|.
T Consensus 53 ~~~~~~~~~yw~~Ia~elq~fGgnt~~n~lRG~Gv 87 (237)
T PRK10236 53 EGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGK 87 (237)
T ss_pred cccchhHHHHHHHHHHHHHHhcchHHHHHHhcCCc
Confidence 444 3456789999888876544333 889885
No 367
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=22.40 E-value=94 Score=24.53 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 63 AHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 63 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
......|.-.++.|+.+.++++||+-=|++...+.
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~ 110 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALD 110 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhccc
Confidence 56667788888999999999999999888876554
No 368
>KOG0372|consensus
Probab=22.18 E-value=1.9e+02 Score=23.67 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=34.5
Q ss_pred CEEEEcCCccchhcHHHHHHHHHhhc-----C---cee------cccccccCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy1055 18 PIIIMHGLLGSKNNWNSLAKAIHRKT-----K---KKI------ARNHGDSPHTDVFSYAHLAEDVKYFLETESIA 79 (256)
Q Consensus 18 ~iv~lHG~~~~~~~w~~~~~~l~~~~-----~---~~v------~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~ 79 (256)
.|+++||..+..-+--.++..+-+.. . -++ .+|.|.|++...|.+-. +-+..|++..+++
T Consensus 155 kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~--dvv~~F~~~N~~~ 228 (303)
T KOG0372|consen 155 KIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGE--DVVESFLEANGLS 228 (303)
T ss_pred cEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccH--HHHHHHHHhCChH
Confidence 58899999875544344444443321 0 011 46888888876654421 2345677777665
No 369
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=22.12 E-value=2e+02 Score=22.46 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=30.8
Q ss_pred HHHHHcCCCceeEEeeC-hhHHHHHHHHHhCCCCcccEEEEeCC
Q psy1055 71 YFLETESIAQADVLGHS-MGGRAMMYLALANPHLVSSLIVVDIS 113 (256)
Q Consensus 71 ~~l~~l~~~~~~lvGhS-~Gg~ia~~~A~~~P~~v~~lil~~~~ 113 (256)
+..+.+...++.++|-. +|+.++..+|.. .|..++++|..
T Consensus 14 ~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 45566677888898765 788898888876 48889999854
No 370
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=21.94 E-value=1.8e+02 Score=24.95 Aligned_cols=38 Identities=18% Similarity=0.066 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHH-HHc-CCCceeEEeeChhHHHHHHHHHh
Q psy1055 62 YAHLAEDVKYFL-ETE-SIAQADVLGHSMGGRAMMYLALA 99 (256)
Q Consensus 62 ~~~~a~dl~~~l-~~l-~~~~~~lvGhS~Gg~ia~~~A~~ 99 (256)
+..-+.....|+ ++. -.++++..|.|-|+++|-.+|..
T Consensus 103 L~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 103 LVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 333444444444 333 34789999999999999888863
No 371
>TIGR03632 bact_S11 30S ribosomal protein S11. This model describes the bacterial 30S ribosomal protein S11. Cutoffs are set such that the model excludes archaeal and eukaryotic ribosomal proteins, but many chloroplast and mitochondrial equivalents of S11 are detected.
Probab=21.50 E-value=2.9e+02 Score=19.18 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=41.5
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEE--eeChhHHHHHHHHHhCCCCcccEEEEeCCCC
Q psy1055 50 NHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVL--GHSMGGRAMMYLALANPHLVSSLIVVDISPV 115 (256)
Q Consensus 50 ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lv--GhS~Gg~ia~~~A~~~P~~v~~lil~~~~~~ 115 (256)
|+..+.+...|.....++.+...+.++++..++++ |..-|...++..-.+..-.|.+ +.|.+|.
T Consensus 33 gfkg~rk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~~kG~G~gr~~~ir~l~~~glkI~~--I~D~T~i 98 (108)
T TIGR03632 33 GFKGSKKSTPYAAQLAAEDAAKKAKEFGMKTVDVYVKGPGAGRESAIRALQAAGLEVTS--IKDVTPI 98 (108)
T ss_pred eeCCCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEE--EEEcCCC
Confidence 44444444556678889999999999999976654 7777877766655444333333 3455554
No 372
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=21.41 E-value=1.6e+02 Score=21.66 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCceeEEeeChhHHHHHH-HHHhCCCCcccEEEEeCC
Q psy1055 67 EDVKYFLETESIAQADVLGHSMGGRAMMY-LALANPHLVSSLIVVDIS 113 (256)
Q Consensus 67 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~-~A~~~P~~v~~lil~~~~ 113 (256)
.++.+++++.+++.++|+|-+....|..- ..+... ..+-.++.|++
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~-g~~v~vi~Da~ 134 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDL-GYDVTVVADAC 134 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHC-CCcEEEecccc
Confidence 47888899999999999999987666543 333333 35556665643
No 373
>PRK12318 methionine aminopeptidase; Provisional
Probab=21.37 E-value=95 Score=25.88 Aligned_cols=29 Identities=14% Similarity=0.331 Sum_probs=17.8
Q ss_pred CHHHHHHHHHHHHHHcCCCce-eEEeeChh
Q psy1055 61 SYAHLAEDVKYFLETESIAQA-DVLGHSMG 89 (256)
Q Consensus 61 s~~~~a~dl~~~l~~l~~~~~-~lvGhS~G 89 (256)
+..+..+.+.++++..+.... +.+||++|
T Consensus 183 ~~~dv~~a~~~~~~~~G~~~~~~~~GHgIG 212 (291)
T PRK12318 183 PLYEIGEVIENCADKYGFSVVDQFVGHGVG 212 (291)
T ss_pred CHHHHHHHHHHHHHHcCCccCCCcccCCcC
Confidence 445555555666666666532 56788887
No 374
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.33 E-value=2.9e+02 Score=20.69 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHc--CCCceeEEeeChhHHHHHHHHHhCCCCcccEE
Q psy1055 62 YAHLAEDVKYFLETE--SIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~A~~~P~~v~~li 108 (256)
++.+.+++.++++.+ ..+++.+.|-|-.|.+-+.++-..++.+..++
T Consensus 50 ~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 455666666666555 34679999999999998888877777666665
No 375
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=21.27 E-value=5.1e+02 Score=21.98 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=56.7
Q ss_pred CEEEEcCCccc--hhcHHHHHHHHHhhcCce-ecccccccCCCCCCCHHHHHHHHHHHHHHc-CCCceeEEeeChhHHHH
Q psy1055 18 PIIIMHGLLGS--KNNWNSLAKAIHRKTKKK-IARNHGDSPHTDVFSYAHLAEDVKYFLETE-SIAQADVLGHSMGGRAM 93 (256)
Q Consensus 18 ~iv~lHG~~~~--~~~w~~~~~~l~~~~~~~-v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l-~~~~~~lvGhS~Gg~ia 93 (256)
-++++-....- ...|...+..+.+++... +.|.-| |.....+-+-+.|.+|....+++ ..+ .+++.-|-||..|
T Consensus 118 ~~~~~~~~~d~~~~~~~~~~~e~~~~~g~kpyvIp~GG-~~~~g~lGyv~~a~Ei~~Q~~~~~~fD-~vVva~gs~gT~A 195 (323)
T COG2515 118 EVRAVDAGTDIGINASAEELAEEVRKQGGKPYVIPEGG-SSPLGALGYVRLALEIAEQAEQLLKFD-SVVVAPGSGGTHA 195 (323)
T ss_pred eEEEecCCCChhhchhhHHHHHHHHhcCCCCcEeccCC-cCccccccHHHHHHHHHHHHhhccCCC-EEEEeCCCcchHH
Confidence 34555444433 556888888888776543 456555 54555577888999999988874 445 4455555666555
Q ss_pred H-HHHHhCCCCcccEEEEeC
Q psy1055 94 M-YLALANPHLVSSLIVVDI 112 (256)
Q Consensus 94 ~-~~A~~~P~~v~~lil~~~ 112 (256)
. ......+..=..+|-++.
T Consensus 196 Gl~~g~~~~~~~~~ViG~~v 215 (323)
T COG2515 196 GLLVGLAQLGPDVEVIGIDV 215 (323)
T ss_pred HHHHHhhhccCCCceEEEee
Confidence 4 334444544455665553
No 376
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=21.07 E-value=3.9e+02 Score=20.49 Aligned_cols=63 Identities=8% Similarity=-0.030 Sum_probs=33.6
Q ss_pred CCCCEEEEcCCccchhcHHHHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHH-HHHHHcCCC
Q psy1055 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVK-YFLETESIA 79 (256)
Q Consensus 15 ~~~~iv~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~-~~l~~l~~~ 79 (256)
.+.|+++..--.-....-...+..|++.+..++-+.-|.= ..+-+++++++-+. .+++.+|++
T Consensus 111 ~~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~g~~--~~p~~~~~~~~~i~~~~l~~lg~~ 174 (181)
T TIGR00421 111 ERRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMPAFY--TRPKSVEDMIDFIVGRVLDQLGIE 174 (181)
T ss_pred cCCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCCccc--CCCCCHHHHHHHHHHHHHHHcCCC
Confidence 3567777772111111113445567776544453332221 12247888888777 577888875
No 377
>PRK08671 methionine aminopeptidase; Provisional
Probab=20.95 E-value=1.1e+02 Score=25.49 Aligned_cols=31 Identities=10% Similarity=0.230 Sum_probs=25.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCc-eeEEeeChhH
Q psy1055 60 FSYAHLAEDVKYFLETESIAQ-ADVLGHSMGG 90 (256)
Q Consensus 60 ~s~~~~a~dl~~~l~~l~~~~-~~lvGhS~Gg 90 (256)
.+..+..+.+.++++..|.++ .++.||++|=
T Consensus 125 ~~~~dv~~~i~~vi~~~G~~~~~~~~GHgiG~ 156 (291)
T PRK08671 125 VSVGEIGRVIEETIRSYGFKPIRNLTGHGLER 156 (291)
T ss_pred CCHHHHHHHHHHHHHHcCCcccCCCcccCcCC
Confidence 467778888888999998876 4689999994
No 378
>PF15566 Imm18: Immunity protein 18
Probab=20.47 E-value=1.6e+02 Score=17.60 Aligned_cols=30 Identities=17% Similarity=0.368 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEeeChhHH
Q psy1055 62 YAHLAEDVKYFLETESIAQADVLGHSMGGR 91 (256)
Q Consensus 62 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ 91 (256)
+.-++++|..+.+...-+..+++--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 455777888888877667899999999995
No 379
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=20.46 E-value=5.2e+02 Score=22.21 Aligned_cols=70 Identities=16% Similarity=0.143 Sum_probs=42.6
Q ss_pred EEEEcCCccchhcHHHHHHHHHhhcCcee--cccc--cccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHH
Q psy1055 19 IIIMHGLLGSKNNWNSLAKAIHRKTKKKI--ARNH--GDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAM 93 (256)
Q Consensus 19 iv~lHG~~~~~~~w~~~~~~l~~~~~~~v--~~gh--G~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia 93 (256)
.++|+|+..+...-..+++.++.. ...| +|-| |.+.... .+ +...+.+.++++..|+. +.|..|+|--|.
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l-~~~VnLIPynp~~~~~~~~-ps-~e~i~~f~~~L~~~Gi~--vtvR~~~G~di~ 333 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGF-QSHVNLIPYNPIDEVEFQR-PS-PKRIQAFQRVLEQRGVA--VSVRASRGLDAN 333 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcC-CCeEEEecCCCCCCCCCCC-CC-HHHHHHHHHHHHHCCCe--EEEeCCCCCchh
Confidence 568999999887777788777753 2233 4433 3332211 23 33344566667777764 357899987554
No 380
>PRK06382 threonine dehydratase; Provisional
Probab=20.33 E-value=5.9e+02 Score=22.32 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=45.3
Q ss_pred EEcCCccchhcHHHHHHHHHhhcCceecccccccCCCCCCCHHHHHHHHHHHHHHcCCCceeEEeeChhHHHHHHH-HHh
Q psy1055 21 IMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYL-ALA 99 (256)
Q Consensus 21 ~lHG~~~~~~~w~~~~~~l~~~~~~~v~~ghG~S~~~~~~s~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~-A~~ 99 (256)
.+||. +.......+..+++.........+. ..+.+..+..--.+++++++--..++++-.-||.++-.. +.+
T Consensus 123 v~~~~--~~~~a~~~a~~la~~~~~~~v~~~~-----~~~~i~g~~t~~~Ei~eq~~~~d~vvvpvG~GG~~~Gv~~~~k 195 (406)
T PRK06382 123 ILTGR--DYDEAHRYADKIAMDENRTFIEAFN-----DRWVISGQGTIGLEIMEDLPDLDQIIVPVGGGGLISGIALAAK 195 (406)
T ss_pred EEECC--CHHHHHHHHHHHHHhcCCEecCccC-----ChHHHHHHHHHHHHHHHhcCCCCEEEEeeChHHHHHHHHHHHH
Confidence 35553 2233344556666543333232222 113344444456677788775578899999999887433 333
Q ss_pred --CCCCcccEEEEeC
Q psy1055 100 --NPHLVSSLIVVDI 112 (256)
Q Consensus 100 --~P~~v~~lil~~~ 112 (256)
.|+ -+++.+++
T Consensus 196 ~~~p~--~~vigVe~ 208 (406)
T PRK06382 196 HINPN--VKIIGIES 208 (406)
T ss_pred HhCCC--CEEEEEEE
Confidence 343 46777664
No 381
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=20.24 E-value=1.9e+02 Score=23.91 Aligned_cols=54 Identities=17% Similarity=0.289 Sum_probs=36.0
Q ss_pred CCCCCeeEEecCCCCCccCCChhHHhhcCCCCeEEEec-CCCccc-cccCchHHHHHHHHHH
Q psy1055 193 TYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIE-DAGHWV-HSQKPDLFVDKVVDFY 252 (256)
Q Consensus 193 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~-~~GH~~-~~e~p~~~~~~i~~fl 252 (256)
..++|+.++.|++ . ..++.++..|+.+...+. ..|.+. -.-.|++..+.|++=.
T Consensus 145 ~~gVPV~lVsGDd-~-----~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a 200 (266)
T cd08663 145 EYGVPVVLVTGDD-A-----ACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAA 200 (266)
T ss_pred hcCCCEEEEecCH-H-----HHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHH
Confidence 5689999999953 2 234456678999887774 445333 3445788877777654
No 382
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.10 E-value=1.4e+02 Score=23.15 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHcCCCceeEEeeChhHHHHHHHH
Q psy1055 64 HLAEDVKYFLETESIAQADVLGHSMGGRAMMYLA 97 (256)
Q Consensus 64 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A 97 (256)
....-|.--+..++.+.++++|||-=|++...+.
T Consensus 72 ~~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 3556777778999999999999999888876654
No 383
>TIGR03789 pdsO proteobacterial sortase system OmpA family protein. A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the OmpA protein family (pfam00691). Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein.
Probab=20.04 E-value=1.7e+02 Score=23.71 Aligned_cols=68 Identities=9% Similarity=0.158 Sum_probs=40.7
Q ss_pred CEEEEcCCcc----chhcHHHHHHHHHhhcCcee-cccccccCCCCCCCH---HHHHHHHHHHHHHcCCCc--eeEEe
Q psy1055 18 PIIIMHGLLG----SKNNWNSLAKAIHRKTKKKI-ARNHGDSPHTDVFSY---AHLAEDVKYFLETESIAQ--ADVLG 85 (256)
Q Consensus 18 ~iv~lHG~~~----~~~~w~~~~~~l~~~~~~~v-~~ghG~S~~~~~~s~---~~~a~dl~~~l~~l~~~~--~~lvG 85 (256)
.|.|--|... .....+.++..|.+.....| +.||-++.....+++ ..-|+.+..++...|+++ +...|
T Consensus 136 ~V~F~~gSa~L~p~~~~~L~~iA~~Lk~~p~~~V~I~GHTD~~Gs~~~N~~LS~~RA~aV~~yLv~~GI~~~RI~~~G 213 (239)
T TIGR03789 136 NVQFRTGSSDIEPHFQPQLDEVATLMKQSPELKLDLSGYADRRGDSQYNQALSEQRVLEVRSYLIKQGVDEARLTTQA 213 (239)
T ss_pred ceeeCCCCccCCHHHHHHHHHHHHHHHhCCCCeEEEEEeCCCCCChhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEEE
Confidence 4556555532 23334556666665432233 888877655444554 467888888888888874 44444
Done!