RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1055
(256 letters)
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 231 bits (590), Expect = 2e-76
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 24/251 (9%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVFSYAHLAEDV 69
+ PI+++HGL GS +N LA+ + I RNHG SP V +Y +A+D+
Sbjct: 13 QHNNSPIVLVHGLFGSLDNLGVLARDLVND-HNIIQVDVRNHGLSPREPVMNYPAMAQDL 71
Query: 70 KYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFD 129
L+ I +A +GHSMGG+A+M L P + L+ +DI+PV R +F
Sbjct: 72 VDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV--RRHDEIFA 129
Query: 130 AMKSVNLDELSGQPLHAVRKIVDKALATAVDLKG---------KQIIWQCNLDSLQTQFF 180
A+ +V+ + R+ + ++ +G W+ N+ L +
Sbjct: 130 AINAVSESDAQ------TRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLW-DQY 182
Query: 181 NHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQK 240
H++ + + + P LFI GG S ++ ++ + + FP+A I AGHWVH++K
Sbjct: 183 PHIVGWEK--IPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEK 240
Query: 241 PDLFVDKVVDF 251
PD + + +
Sbjct: 241 PDAVLRAIRRY 251
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 198 bits (506), Expect = 9e-63
Identities = 46/253 (18%), Positives = 92/253 (36%), Gaps = 26/253 (10%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVFSYA--HLAEDVKY 71
+I +HG + + W+++ + +A HG S + +Y+ +E +
Sbjct: 82 PRVIFLHGGGQNAHTWDTVIVGLGEPA---LAVDLPGHGHSAWREDGNYSPQLNSETLAP 138
Query: 72 FLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT----------- 120
L + V+G S+GG + LA P LV L++VD++P +
Sbjct: 139 VLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTV 198
Query: 121 -LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQF 179
L H F + +++ ++ P V+ + + L +W+ +
Sbjct: 199 ALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRT---- 254
Query: 180 FNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAE-ITYIEDAGHWVHS 238
F + P + GG S F+ +D + + +E +GH V S
Sbjct: 255 FGDFAGLWDDVDA-LSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQS 313
Query: 239 QKPDLFVDKVVDF 251
+P ++ V
Sbjct: 314 DQPRALIEIVRGV 326
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 174 bits (442), Expect = 7e-54
Identities = 46/252 (18%), Positives = 95/252 (37%), Gaps = 13/252 (5%)
Query: 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVFSYAHLAEDVK 70
T ++++HGLLGS +W + + R + HG +P ++A E ++
Sbjct: 14 ARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIE 73
Query: 71 YFLETESIAQ--ADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF 128
++ ++ ++G+S+GGR +M+ +L I L+
Sbjct: 74 QTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEG--GHFGLQENEEKA 131
Query: 129 DAMKSVNL--DELSGQPLHAV-RKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMIN 185
+ S QP+ V +A+ ++++ + +Q + +L + HM+
Sbjct: 132 ARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSS-VAHMLL 190
Query: 186 FPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF--PRAEITYIEDAGHWVHSQKPDL 243
++ Y P L ++ E + L + + AGH VH ++P
Sbjct: 191 ATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQLAESSGLSYSQVAQAGHNVHHEQPQA 250
Query: 244 FVDKVVDFYRSL 255
F V S+
Sbjct: 251 FAKIVQAMIHSI 262
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A,
alternative splicing, hydrolase, phosphoprotein, serine
esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Length = 316
Score = 170 bits (432), Expect = 7e-52
Identities = 46/267 (17%), Positives = 92/267 (34%), Gaps = 31/267 (11%)
Query: 14 PDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPHTDV--FSYAHLAE 67
+ ++++HG S +W AI + + +I R+HG++ + S +A+
Sbjct: 36 SEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAK 95
Query: 68 DVKYFLET---ESIAQADVLGHSMGGRAMMYLALAN-PHLVSSLIVVDISPVGVSPTLRH 123
DV +E + ++GHSMGG ++ A +N + L ++D+ L
Sbjct: 96 DVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNS 155
Query: 124 ----MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQII------------ 167
+ G KS+ +R + ++ +K + I
Sbjct: 156 MQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPY 215
Query: 168 -WQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEI 226
W+ L + + + P L + G + I + + ++
Sbjct: 216 TWRIELAKTEKYWDGWFRGLSNLFL-SCPIPKLLLLAGVDRLDKDLT---IGQMQGKFQM 271
Query: 227 TYIEDAGHWVHSQKPDLFVDKVVDFYR 253
+ GH VH PD + V F
Sbjct: 272 QVLPQCGHAVHEDAPDKVAEAVATFLI 298
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 141 bits (355), Expect = 8e-40
Identities = 48/298 (16%), Positives = 84/298 (28%), Gaps = 57/298 (19%)
Query: 9 ETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----------ARNHGDSP--- 55
++ +HG SK W + + NHGDS
Sbjct: 45 RRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRN 104
Query: 56 ---HTDVFSYAHLAEDVKYFLETESIAQAD------VLGHSMGGRAMMYLALANPHLVSS 106
F++ A DV E + V+GHSMGG + + P+L
Sbjct: 105 RGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHL 164
Query: 107 LIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAV------- 159
LI+++ PV ++ S + E L + V
Sbjct: 165 LILIE--PVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGS 222
Query: 160 ------------------------DLKGKQIIWQCNLDSLQTQFFNHMINFP--QPGEKT 193
D G + + + N P K
Sbjct: 223 FFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKF 282
Query: 194 YGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
T+ I G RS++ ++ ++ + I H V+ + PDL ++++
Sbjct: 283 VRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERINHH 340
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 127 bits (321), Expect = 1e-35
Identities = 47/271 (17%), Positives = 94/271 (34%), Gaps = 29/271 (10%)
Query: 8 TETPVDPDTKPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHTD---V 59
D P++ + GL + ++ LA + + + R GDS +
Sbjct: 21 RAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRV---LCPEMRGRGDSDYAKDPMT 77
Query: 60 FSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSP 119
+ +D++ L E I + +G S+GG M LA ANP +++ ++ D+ P
Sbjct: 78 YQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPE 137
Query: 120 TLRHMSG----------LFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQ 169
L + G A +++ P + + + A V +I +
Sbjct: 138 GLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFD 197
Query: 170 CNLDSLQTQFFNHMINFPQPG-----EKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA 224
++ + F + PQ + P L + G SD + + + S P
Sbjct: 198 YDMK-IAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMAS-RPGV 255
Query: 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
E+ + GH +P+ + +
Sbjct: 256 ELVTLPRIGHAPTLDEPESI-AAIGRLLERV 285
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 119 bits (299), Expect = 2e-32
Identities = 25/266 (9%), Positives = 75/266 (28%), Gaps = 21/266 (7%)
Query: 1 MSFKVADTETPVDPDTKPIIIMH--GLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSP 55
++ + T + + G + +N+ ++ + + N G SP
Sbjct: 26 VNTLLGPIYTCHREGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGI-LTIDAPNSGYSP 84
Query: 56 HTD--VFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDIS 113
++ + E + HS+GG A + + + I ++ +
Sbjct: 85 VSNQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144
Query: 114 PVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVD----LKGKQIIWQ 169
V + + + L+ ++ + ++ Q
Sbjct: 145 TVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQ 204
Query: 170 CNLDSLQTQFFNH--MINFPQPGEKTYGGPTLFIGGG--RSDFIRQEDHPGIKSLFPRAE 225
N F + + P++ +++ E + + +
Sbjct: 205 LNDVQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESFREKEYLESE----YLNKHTQTK 260
Query: 226 ITYIEDAGHWVHSQKPDLFVDKVVDF 251
+ + H++H + + ++KV
Sbjct: 261 L-ILCGQHHYLHWSETNSILEKVEQL 285
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 117 bits (295), Expect = 1e-31
Identities = 43/251 (17%), Positives = 88/251 (35%), Gaps = 26/251 (10%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAI---HRKTKKKIA---RNHGDSPHTDV-FSYAHLAEDVK 70
++ HG+ + + L + IA R HG S + + A+D+
Sbjct: 70 LMLFFHGITSNSAVFEPLMIRLSDRFTT----IAVDQRGHGLSDKPETGYEANDYADDIA 125
Query: 71 YFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF-- 128
+ T + A ++GHS+G R + A P LV S++ +D +P + L +
Sbjct: 126 GLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNA 185
Query: 129 --------DAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFF 180
A+++ P A+R + + + ++ Q
Sbjct: 186 GSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGG----LRPLASSAAMA-QTA 240
Query: 181 NHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQK 240
+ + P + P L + G S + L P + + A H+V+
Sbjct: 241 RGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVS 300
Query: 241 PDLFVDKVVDF 251
P++ + + +F
Sbjct: 301 PEITLKAITNF 311
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 112 bits (281), Expect = 6e-30
Identities = 37/247 (14%), Positives = 74/247 (29%), Gaps = 16/247 (6%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHTD-VFSYAHLAED 68
PII +HGL K + L+ + I G+S S L
Sbjct: 22 TPIIFLHGLSLDKQSTCLFFEPLSNVGQYQR---IYLDLPGMGNSDPISPSTSDNVLETL 78
Query: 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSP---TLRHMS 125
++ E + + GHS GG +A + + T +H++
Sbjct: 79 IEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHIN 138
Query: 126 GLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMIN 185
L + + V E L ++ I++ + + + + N+
Sbjct: 139 ILEEDINPVENKEYFADFL-SMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFT 197
Query: 186 F-PQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLF 244
F + Y P + G + ++ + + EI + GH + + +
Sbjct: 198 FEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAV 257
Query: 245 VDKVVDF 251
F
Sbjct: 258 GFHFDLF 264
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 107 bits (270), Expect = 3e-28
Identities = 41/258 (15%), Positives = 75/258 (29%), Gaps = 24/258 (9%)
Query: 9 ETPVDPDTKPIIIMHGLLGSKNNWNSLAKAI---HRKTKKKIA---RNHGDSPH-TDVFS 61
+ D D I+++ G + L + + R I R HG SP F
Sbjct: 20 DNQRDTDGPAILLLPGWCHDHRVYKYLIQELDADFRV----IVPNWRGHGLSPSEVPDFG 75
Query: 62 YAHLAEDVKYFLETESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPT 120
Y +D L+ + + HS GG + L A P I++D P
Sbjct: 76 YQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPD 135
Query: 121 -------LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLD 173
L+ + + L G VR + + +A W +
Sbjct: 136 FAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADY-----GYDCWGRSGR 190
Query: 174 SLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAG 233
++ + + T P I ++ ++ + P +
Sbjct: 191 VIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPT 250
Query: 234 HWVHSQKPDLFVDKVVDF 251
H+ PD + +F
Sbjct: 251 HFPAIDVPDRAAVHIREF 268
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 106 bits (267), Expect = 6e-28
Identities = 41/259 (15%), Positives = 90/259 (34%), Gaps = 29/259 (11%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDS--PHTDVFSYAHL 65
+ ++ +HG L +++ + + I HG+ + +++ ++
Sbjct: 13 VETNQVLVFLHGFLSDSRTYHNHIEKFTDNYHV---ITIDLPGHGEDQSSMDETWNFDYI 69
Query: 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMS 125
+ L+ + G+SMGGR +Y A+ +S+LI+ SP +
Sbjct: 70 TTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLER 129
Query: 126 GLFDA----------MKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSL 175
L D ++ +++ PL + + + + +Q + +
Sbjct: 130 RLVDDARAKVLDIAGIELF-VNDWEKLPLFQSQLELPVEIQHQI----RQQRLSQSPHKM 184
Query: 176 QTQFFN-HMINFPQPGE--KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDA 232
+ P K PTL + G D + + +L P ++ I
Sbjct: 185 AKALRDYGTGQMPNLWPRLKEIKVPTLIL-AGEYDEKFVQIAKKMANLIPNSKCKLISAT 243
Query: 233 GHWVHSQKPDLFVDKVVDF 251
GH +H + D F ++ F
Sbjct: 244 GHTIHVEDSDEFDTMILGF 262
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 105 bits (265), Expect = 2e-27
Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 25/257 (9%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDS-PHTDV--FSYAHLAED 68
P+ + H +N N+ A H + G+S + +S +D
Sbjct: 24 PPLCVTHLYSEYNDNGNTFANPFTDHYSV---YLVNLKGCGNSDSAKNDSEYSMTETIKD 80
Query: 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPV-----GVSPTLRH 123
++ E I + GHS GG + A ++ +IV +
Sbjct: 81 LEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCS 140
Query: 124 MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQI---IWQCNLDSLQTQFF 180
+ F+ + S+ + RK + + A +++ + N
Sbjct: 141 KNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRL 200
Query: 181 NHMINFPQPGE------KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGH 234
N+ K P+ G I +L P A +T E++ H
Sbjct: 201 NYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNH 260
Query: 235 WVHSQKPDLFVDKVVDF 251
++ D F V D
Sbjct: 261 NPFVEEIDKFNQFVNDT 277
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 100 bits (252), Expect = 1e-25
Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 27/263 (10%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHT-DVFSY--AHLA 66
P+ ++ +HG+L W +A + + + +A HG S H V SY
Sbjct: 23 SPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82
Query: 67 EDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI----SPVGVSPTLR 122
+ ++ ++GHSMG +A P + LI+V++ +
Sbjct: 83 AQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVN 142
Query: 123 HMSGLFDAMKSVN-------LDELSGQPLHAVRKIVDKALATAVD--LKGKQIIWQCNLD 173
++ D + S + + + A+ + ++ + Q + + D
Sbjct: 143 QLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWD 202
Query: 174 SLQTQFFNHMINFPQPGEKTYGG-------PTLFIGGGRSDFIRQEDHPGIKSLFPRAEI 226
++ +N G Y PT + G S R ED K +A+
Sbjct: 203 AIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKR 262
Query: 227 TYIEDAGHWVHSQKPDLFVDKVV 249
++ GH +H ++
Sbjct: 263 VFL-SGGHNLHIDAAAALASLIL 284
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 98.1 bits (245), Expect = 8e-25
Identities = 36/252 (14%), Positives = 76/252 (30%), Gaps = 42/252 (16%)
Query: 18 PIIIMHGLLGS-KNNWNS----LAKAIHRKTKKKIA---RNHGDSPHTD----VFSYAHL 65
++++ G+LGS + ++ L K + +A R +G S D +
Sbjct: 25 AVLLLPGMLGSGETDFGPQLKNLNKKLFTV----VAWDPRGYGHSRPPDRDFPADFFERD 80
Query: 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT----- 120
A+D ++ + +LG S GG + A P + +++ +
Sbjct: 81 AKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE 140
Query: 121 -LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQF 179
+R +S + + + + L I L +Q
Sbjct: 141 GIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRH-LLPRVQC-- 197
Query: 180 FNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQ 239
P L + G + + + I + + + + H +H +
Sbjct: 198 -----------------PALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLR 240
Query: 240 KPDLFVDKVVDF 251
D F DF
Sbjct: 241 FADEFNKLAEDF 252
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 96.3 bits (240), Expect = 6e-24
Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 16/250 (6%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKK---IA---RNHGDS--PHTDVFSYAHLAED 68
+ ++++HG W + ++ I + I G S A
Sbjct: 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARI 96
Query: 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF 128
+K ++ IA+ +LG+SMGG + + L P V L+++ G+S +
Sbjct: 97 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGI 156
Query: 129 DAMKSVNLDELSGQPLHAVRKIV--DKALAT--AVDLKGKQIIWQ-CNLDSLQTQFFNHM 183
+ + + + + L + I D + T + + ++ + +L++ +
Sbjct: 157 KRLNQL-YRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANP 215
Query: 184 INFPQPGE--KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKP 241
FP G TL + G F+ + + S +E+ D GHW +
Sbjct: 216 KQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHA 275
Query: 242 DLFVDKVVDF 251
D F V++F
Sbjct: 276 DAFNQLVLNF 285
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 95.5 bits (238), Expect = 1e-23
Identities = 45/247 (18%), Positives = 89/247 (36%), Gaps = 17/247 (6%)
Query: 18 PIIIMHGL---LGSKNNWNSLAKAI--HRKTKKKIA---RNHGDS--PHTDVFSYAHLAE 67
P+I++HG + + NW A+ + IA G + P +S +
Sbjct: 27 PVILIHGSGPGVSAYANWRLTIPALSKFYRV---IAPDMVGFGFTDRPENYNYSKDSWVD 83
Query: 68 DVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ ++ I +A ++G++ GG + AL V ++++ + T ++ +
Sbjct: 84 HIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVT-EGLNAV 142
Query: 128 FDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFP 187
+ S+ R +V LA Q +Q + S+ + I+
Sbjct: 143 WGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL 202
Query: 188 QPGEKTYGG---PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLF 244
++ TL I G + + L RA++ GHW ++ D F
Sbjct: 203 ASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRF 262
Query: 245 VDKVVDF 251
VV+F
Sbjct: 263 NRLVVEF 269
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 93.1 bits (232), Expect = 7e-23
Identities = 48/263 (18%), Positives = 83/263 (31%), Gaps = 44/263 (16%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHTDVFSYAHLAEDVKYF 72
++++HG + W + + + H G S S A +AE V
Sbjct: 15 HLVLLHGWGLNAEVWRCIDEELSSHFTL---HLVDLPGFGRSRGFGALSLADMAEAVLQQ 71
Query: 73 LETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMK 132
+A LG S+GG +AL +P V +L+ V SP + G+ +
Sbjct: 72 A----PDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWP--GIKPDVL 125
Query: 133 SVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEK 192
+ +LS V + + AL T +Q ++ P P
Sbjct: 126 AGFQQQLSDDQQRTVERFL--ALQTMGTETARQDAR---------ALKKTVLALPMPEVD 174
Query: 193 TYGG-------------------PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAG 233
G P L + G + ++ P + L+P +E A
Sbjct: 175 VLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAA 234
Query: 234 HWVHSQKPDLFVDKVVDFYRSLS 256
H P F +V + +
Sbjct: 235 HAPFISHPAEFCHLLVALKQRVG 257
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 92.6 bits (230), Expect = 3e-22
Identities = 51/274 (18%), Positives = 85/274 (31%), Gaps = 37/274 (13%)
Query: 11 PVDPDTKPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDS--PHTDVFS 61
P + + I++MHG W + LA A +R IA S P +S
Sbjct: 41 PKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRV----IAVDQVGFCKSSKPAHYQYS 96
Query: 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTL 121
+ LA + LE +A+A V+GHSMGG AL P V L++V+ + L
Sbjct: 97 FQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKAL 156
Query: 122 RHMSGLFDAMKSVNLDELSGQPLHAVRKIV-DKALATAVDLKGKQIIWQCNLDSLQTQFF 180
D +L + + D + ++ +
Sbjct: 157 GVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAW 216
Query: 181 NHMINFPQPGEKTYGG-------PTLFIGG----------------GRSDFIRQEDHPGI 217
N + + + PTL + G +
Sbjct: 217 NSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDA 276
Query: 218 KSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
P+A + D GH Q P+ F +++
Sbjct: 277 ARRIPQATLVEFPDLGHTPQIQAPERFHQALLEG 310
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 92.0 bits (229), Expect = 4e-22
Identities = 40/251 (15%), Positives = 76/251 (30%), Gaps = 23/251 (9%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDS--PHTDVFSYAHL 65
D P++++HG L S W +T A + P +
Sbjct: 64 PEDAPPLVLLHGALFSSTMWYPNIADWSSKYRT---YAVDIIGDKNKSIPENVSGTRTDY 120
Query: 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMS 125
A + + I ++ ++G S+GG M L P V S ++ + +
Sbjct: 121 ANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYK 180
Query: 126 GLFDAMKSVNLDEL----SGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFN 181
S ++ V + A + G + D F +
Sbjct: 181 YALGLTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPN-ADGFPYVFTD 239
Query: 182 HMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPRAEITYIEDAGHWVHSQK 240
+ ++ P L + G S P E I++AGH + ++
Sbjct: 240 EEL-------RSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQ 292
Query: 241 PDLFVDKVVDF 251
P ++V+ F
Sbjct: 293 PTYVNERVMRF 303
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 91.2 bits (227), Expect = 5e-22
Identities = 33/267 (12%), Positives = 88/267 (32%), Gaps = 39/267 (14%)
Query: 13 DPDTKPIIIMHGL---LGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHTDVFSY-- 62
DP + ++++HG + +NW + + + +A G S + + +
Sbjct: 26 DPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFV---VAPDLIGFGQSEYPETYPGHI 82
Query: 63 ----AHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVS 118
E + + I ++ ++G+SMGG + L + P + ++ ++
Sbjct: 83 MSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMN 142
Query: 119 PTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGK----QIIWQCNLDS 174
++ L + L R+++ + + G + ++ D
Sbjct: 143 ARPPELARLLAF--------YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDP 194
Query: 175 LQTQFFNHMINFPQPGEKTYGG----------PTLFIGGGRSDFIRQEDHPGIKSLFPRA 224
+ M + G ++ L G + + + + A
Sbjct: 195 EVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHA 254
Query: 225 EITYIEDAGHWVHSQKPDLFVDKVVDF 251
E+ ++ GHW ++ D +++
Sbjct: 255 ELVVLDRCGHWAQLERWDAMGPMLMEH 281
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 90.8 bits (226), Expect = 8e-22
Identities = 39/263 (14%), Positives = 86/263 (32%), Gaps = 33/263 (12%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAI-----HRKTKKKIA---RNHGDS--PHTDVFSY 62
+ + ++++HG +W + ++ I H +A +G S
Sbjct: 33 VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHV---LAVDQPGYGHSDKRAEHGQFN 89
Query: 63 AHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD-------ISPV 115
+ A +K + + + ++G+++GG + AL P L+++ +
Sbjct: 90 RYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAP 149
Query: 116 GVSPTLRHMSGLF-----DAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQC 170
+ ++ +S + +++ L + ++VD+ A A
Sbjct: 150 DPTEGVKRLSKFSVAPTRENLEAF-LRVMVYDKNLITPELVDQRFALAST-PESLTA--- 204
Query: 171 NLDSLQTQFFNHMINFPQPGE--KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITY 228
++ F P L I G + PRA++
Sbjct: 205 -TRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHV 263
Query: 229 IEDAGHWVHSQKPDLFVDKVVDF 251
GHWV +K D F ++F
Sbjct: 264 FGQCGHWVQVEKFDEFNKLTIEF 286
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 90.5 bits (225), Expect = 1e-21
Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 30/256 (11%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAIHRKTKKK---IA---RNHGDS--PHTDVFSYAHLAEDV 69
+I++HG W++ + + I S D A V
Sbjct: 35 TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 94
Query: 70 KYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVG-------VSPTLR 122
K ++ I +A ++G++MGG + AL P + LI++ +G ++
Sbjct: 95 KGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIK 154
Query: 123 HMSGL-----FDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQT 177
+ L ++ +K + L +++ +L +
Sbjct: 155 LLFKLYAEPSYETLKQM-LQVFLYDQSLITEELLQGRWEAIQRQPE-------HLKNFLI 206
Query: 178 QFFNHMINFPQPGE--KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHW 235
++ T G F+ + + A + G W
Sbjct: 207 SAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAW 266
Query: 236 VHSQKPDLFVDKVVDF 251
+ D F V+DF
Sbjct: 267 AQWEHADEFNRLVIDF 282
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 89.6 bits (223), Expect = 2e-21
Identities = 45/263 (17%), Positives = 75/263 (28%), Gaps = 42/263 (15%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHTDV-FSYAHLAED 68
KP++ HG L + W L+ +R IA R G S Y A+D
Sbjct: 20 KPVLFSHGWLLDADMWEYQMEYLSSRGYRT----IAFDRRGFGRSDQPWTGNDYDTFADD 75
Query: 69 VKYFLETESIAQADVLGHSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ +E + + ++G SMGG Y+A V+ L+++ + G+
Sbjct: 76 IAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGV 135
Query: 128 FDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFP 187
+ + EL + Q + Q
Sbjct: 136 PLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQT--------QTLQIA--LL 185
Query: 188 QPGEKTYGG------------------PTLFIGGGRSDFIRQEDH-PGIKSLFPRAEITY 228
+ T PTL I G + E L AE+
Sbjct: 186 ASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKV 245
Query: 229 IEDAGHWVHSQKPDLFVDKVVDF 251
+DA H + ++ F
Sbjct: 246 YKDAPHGFAVTHAQQLNEDLLAF 268
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Length = 273
Score = 88.9 bits (221), Expect = 3e-21
Identities = 49/263 (18%), Positives = 83/263 (31%), Gaps = 40/263 (15%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHTDV-FSYAHLAED 68
+PI+ HG + ++W LA +R IA R HG S A+D
Sbjct: 20 QPIVFSHGWPLNADSWESQMIFLAAQGYRV----IAHDRRGHGRSSQPWSGNDMDTYADD 75
Query: 69 VKYFLETESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ +E + A + G S GG Y+ V+ ++ P + T + GL
Sbjct: 76 LAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGL 135
Query: 128 ----FDAMKSVNLDELS--------------GQPLHAVRKIVDKALATAVDLKGKQIIWQ 169
FD ++ +L + S QP + G + +
Sbjct: 136 PMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYD 195
Query: 170 CNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQED-HPGIKSLFPRAEITY 228
C +T F + K PTL + G + E +L + +
Sbjct: 196 CIKAFSETDFTEDL--------KKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKI 247
Query: 229 IEDAGHWVHSQKPDLFVDKVVDF 251
A H + D ++ F
Sbjct: 248 YSGAPHGLTDTHKDQLNADLLAF 270
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 89.0 bits (221), Expect = 3e-21
Identities = 42/258 (16%), Positives = 85/258 (32%), Gaps = 28/258 (10%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHTDV-FSYAHLAED 68
+P++++HG ++W L +R I R G S + + Y A D
Sbjct: 24 QPVVLIHGYPLDGHSWERQTRELLAQGYRV----ITYDRRGFGGSSKVNTGYDYDTFAAD 79
Query: 69 VKYFLETESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ LET + ++G SMG Y+A V+ L + + + G+
Sbjct: 80 LHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGV 139
Query: 128 ----FDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHM 183
FD +++ + + + + + + N+ ++ +
Sbjct: 140 PQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNV-AIGSAPVAAY 198
Query: 184 INFPQPGE---------KTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPRAEITYIEDAG 233
P E + G PTL + G + + + + P A+ +E A
Sbjct: 199 AVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAP 258
Query: 234 HWVHSQKPDLFVDKVVDF 251
H + D + F
Sbjct: 259 HGLLWTHADEVNAALKTF 276
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 85.0 bits (211), Expect = 1e-19
Identities = 39/259 (15%), Positives = 74/259 (28%), Gaps = 32/259 (12%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHT-DVFSYAHLAED 68
+P++++HG S ++W +L A +R I R G S + Y A D
Sbjct: 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRV----ITYDRRGFGQSSQPTTGYDYDTFAAD 79
Query: 69 VKYFLETESIAQADVLGHSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ LET + A ++G S G Y++ ++ + + + T + G
Sbjct: 80 LNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGA 139
Query: 128 FD------------AMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSL 175
A + + + + AV
Sbjct: 140 APQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVR----NSWNTAASGGF 195
Query: 176 QTQFFNHMINFPQPGE--KTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPRAEITYIEDA 232
+ P L + G + E+ P AE +E A
Sbjct: 196 FAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGA 255
Query: 233 GHWVHSQKPDLFVDKVVDF 251
H + + ++ F
Sbjct: 256 PHGLLWTHAEEVNTALLAF 274
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase,
hydrolase; 1.90A {Mycobacterium tuberculosis} PDB:
3e3a_A 3hys_A 3hzo_A
Length = 293
Score = 85.1 bits (211), Expect = 1e-19
Identities = 46/266 (17%), Positives = 79/266 (29%), Gaps = 45/266 (16%)
Query: 18 PIIIMHGLLGSKNNWNS-----LAKAIHRKTKKKIA---RNHGDSPHTDVFSYAHLAEDV 69
P++ + G G+ W+ A +R I R G + + + F+ + D
Sbjct: 45 PVVFIAGRGGAGRTWHPHQVPAFLAAGYRC----ITFDNRGIGATENAEGFTTQTMVADT 100
Query: 70 KYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFD 129
+ET IA A V+G SMG L + P LVSS +++
Sbjct: 101 AALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQF----FNK 156
Query: 130 AMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQP 189
A + + P + R + + + N D + +P
Sbjct: 157 AEAELYDSGVQLPPTYDARARLLENFSRK----------TLNDDVAVGDWIAMFSMWPIK 206
Query: 190 GEKTYGG-------------------PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIE 230
P L IG + P I
Sbjct: 207 STPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIP 266
Query: 231 DAGHWVHSQKPDLFVDKVVDFYRSLS 256
DAGH ++P+ ++ F+ S+
Sbjct: 267 DAGHLGFFERPEAVNTAMLKFFASVK 292
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 85.6 bits (212), Expect = 2e-19
Identities = 41/262 (15%), Positives = 76/262 (29%), Gaps = 38/262 (14%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHT-DVFSYAHLAED 68
P++++HG S ++W +L A +R I R G S + Y A D
Sbjct: 25 VPVVLIHGFPLSGHSWERQSAALLDAGYRV----ITYDRRGFGQSSQPTTGYDYDTFAAD 80
Query: 69 VKYFLETESIAQADVLGHSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ LET + A ++G SMG Y++ ++++ + + T + G
Sbjct: 81 LNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGA 140
Query: 128 FDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFP 187
E + AV+ + S + +
Sbjct: 141 APQ-------EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS 193
Query: 188 QPGEKTYGG-----------------PTLFIGGGRSDFIRQEDH-PGIKSLFPRAEITYI 229
P L + G + E+ P AE +
Sbjct: 194 GGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEV 253
Query: 230 EDAGHWVHSQKPDLFVDKVVDF 251
E A H + + ++ F
Sbjct: 254 EGAPHGLLWTHAEEVNTALLAF 275
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 84.0 bits (208), Expect = 2e-19
Identities = 47/264 (17%), Positives = 86/264 (32%), Gaps = 42/264 (15%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHTDV-FSYAHLAED 68
KP++++HG S +W +L +A +R I R G S + Y D
Sbjct: 28 KPVVLIHGWPLSGRSWEYQVPALVEAGYRV----ITYDRRGFGKSSQPWEGYEYDTFTSD 83
Query: 69 VKYFLETESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG- 126
+ LE + ++G SMGG Y++ + ++ P + + H G
Sbjct: 84 LHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGA 143
Query: 127 LFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINF 186
L DA + L + + A + +L S + +N I
Sbjct: 144 LDDATIETFKSGVINDRLAFLDEFTKGFFAAG---------DRTDLVSESFRLYNWDIAA 194
Query: 187 PQPGEKTYGG------------------PTLFIGGGRSDFIRQEDH-PGIKSLFPRAEIT 227
+ T PTL I G + E P +++
Sbjct: 195 GASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVA 254
Query: 228 YIEDAGHWVHSQKPDLFVDKVVDF 251
I+ H +++ F + ++ F
Sbjct: 255 LIKGGPHGLNATHAKEFNEALLLF 278
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A
{Streptomyces aureofaciens} SCOP: c.69.1.12
Length = 274
Score = 83.2 bits (206), Expect = 4e-19
Identities = 46/269 (17%), Positives = 89/269 (33%), Gaps = 51/269 (18%)
Query: 17 KPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHT-DVFSYAHLAED 68
+P++ +HG + + W ++ A +R IA R HG S D + + A+D
Sbjct: 20 RPVVFIHGWPLNGDAWQDQLKAVVDAGYRG----IAHDRRGHGHSTPVWDGYDFDTFADD 75
Query: 69 VKYFLETESIAQADVLGHSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGL 127
+ L + ++ HSMGG Y+ + S +++ P + + ++ G+
Sbjct: 76 LNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGV 135
Query: 128 ----FDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHM 183
FDA+K+ L E S +G + +
Sbjct: 136 PDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAF-------------WY 182
Query: 184 INFPQPGEKTYGG------------------PTLFIGGGRSDFIRQEDH-PGIKSLFPRA 224
+ Q E PTL + G + + + P A
Sbjct: 183 MAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNA 242
Query: 225 EITYIEDAGHWVH--SQKPDLFVDKVVDF 251
E+ E + H + + F +++F
Sbjct: 243 ELKVYEGSSHGIAMVPGDKEKFNRDLLEF 271
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 83.6 bits (207), Expect = 6e-19
Identities = 51/279 (18%), Positives = 81/279 (29%), Gaps = 41/279 (14%)
Query: 8 TETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDSPH-----TD 58
T P P+I++HG G +N+ + A+ +T + + G+S H D
Sbjct: 46 TPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPAD 105
Query: 59 VFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVS 118
++ ++ I + VLG S GG +A+ P + SL + + SP +
Sbjct: 106 FWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICN-SPASMR 164
Query: 119 PTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQ-- 176
L + + L A I A ++ C +
Sbjct: 165 LWSEAAGDLRAQLPAETRAAL--DRHEAAGTITHPDYLQAAAEFYRR--HVCRVVPTPQD 220
Query: 177 -TQFFNHMINFPQ-------PGEKTYGG----------------PTLFIGGGRSDFIRQE 212
M P P E G P L I G D +
Sbjct: 221 FADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVI-AGEHDEATPK 279
Query: 213 DHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
P H H +KP+ F V F
Sbjct: 280 TWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQF 318
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 82.3 bits (204), Expect = 8e-19
Identities = 53/270 (19%), Positives = 88/270 (32%), Gaps = 40/270 (14%)
Query: 13 DPDTKPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHT-DVFSYAH 64
D P++ HG S ++W +R IA R HG S
Sbjct: 18 PRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRV----IAHDRRGHGRSDQPSTGHDMDT 73
Query: 65 LAEDVKYFLETESIAQADVLGHSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPTLRH 123
A DV E + A +GHS GG Y+A A P V+ ++V P + + +
Sbjct: 74 YAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTN 133
Query: 124 MSGL----FDAMK-------SVNLDELSGQPLHAVRKIVDKALATAVD-------LKGKQ 165
GL FD + + ++ P + + +D +
Sbjct: 134 PDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAAN 193
Query: 166 IIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPRA 224
++C +T F + + K P L G + D P L A
Sbjct: 194 AHYECIAAFSETDFTDDL--------KRIDVPVLVAHGTDDQVVPYADAAPKSAELLANA 245
Query: 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254
+ E H + S P++ ++ F +S
Sbjct: 246 TLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 82.0 bits (203), Expect = 1e-18
Identities = 48/248 (19%), Positives = 83/248 (33%), Gaps = 27/248 (10%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHTDVFSYAHLAEDVKYF 72
P++++ G L ++ LA+ + H I R GDS T ++ ED+
Sbjct: 25 PVVLVGGALSTRAGGAPLAERLAPHFTV---ICYDRRGRGDSGDTPPYAVEREIEDLAAI 81
Query: 73 LETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVS--PTLRHMSGLFDA 130
++ A A V G S G + A + + + V S P DA
Sbjct: 82 IDAAGGA-AFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDA 140
Query: 131 MKSVNLDELSGQPLHAVRKIVDKALAT---AVDLKGKQIIWQCNLDSLQTQFFNHMINFP 187
+ G+ AV + + + V + +W T ++H +
Sbjct: 141 L------LAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGD 194
Query: 188 QPGE----KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDL 243
+ PTL + GG S + + P A +E+ H V PD
Sbjct: 195 NTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTHTVA---PDA 251
Query: 244 FVDKVVDF 251
+V+F
Sbjct: 252 IAPVLVEF 259
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 82.4 bits (204), Expect = 1e-18
Identities = 38/255 (14%), Positives = 90/255 (35%), Gaps = 35/255 (13%)
Query: 18 PIIIMHGLLGSKNNWNS-------LAKAIHRKTKKKIA---RNHGDSPHTDV-FSYAHLA 66
P+I++HG + + LA+ H + IA G + D+ ++
Sbjct: 38 PVILIHGGGAGAESEGNWRNVIPILAR--HYRV---IAMDMLGFGKTAKPDIEYTQDRRI 92
Query: 67 EDVKYFLETESI-AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMS 125
+ F++ + + ++G+SMGG + +++ + LV++L+++ + + V +
Sbjct: 93 RHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH-EDLR 151
Query: 126 GLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMIN 185
+ + + + L +D A+ + D + + +
Sbjct: 152 PIINYDFTREGMVHLVKALTNDGFKIDDAMI--------NSRYTYATDEATRKAYVATMQ 203
Query: 186 FPQPGEKTYGG---------PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWV 236
+ + + PTL + G + E L + I GHW
Sbjct: 204 WIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWA 263
Query: 237 HSQKPDLFVDKVVDF 251
+ P+ F + + F
Sbjct: 264 MIEHPEDFANATLSF 278
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase,
polyketide, tailoring enzyme, structural proteomics in
europe, spine; HET: AKT 1PE; 1.45A {Streptomyces
purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Length = 298
Score = 78.3 bits (193), Expect = 3e-17
Identities = 48/281 (17%), Positives = 83/281 (29%), Gaps = 43/281 (15%)
Query: 13 DPDTKPIIIMHGLLGSKNNWN-----SLAKAIHRKTKKKIA---RNHGDSPHTDV----F 60
DP ++++ G S W LA I R+ G S D +
Sbjct: 20 DPADPALLLVMGGNLSALGWPDEFARRLADGGLHV----IRYDHRDTGRSTTRDFAAHPY 75
Query: 61 SYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT 120
+ LA D L+ + +A V+G SMG +AL + +SSL ++ + +
Sbjct: 76 GFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFD 135
Query: 121 LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDS------ 174
+ L L A+ + A A ++ + W+ +
Sbjct: 136 ANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDD 195
Query: 175 -----LQTQFFNHMINFPQPGEKTYGG----------------PTLFIGGGRSDFIRQED 213
+ + +H Y PTL I
Sbjct: 196 AEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPH 255
Query: 214 HPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254
+ L P A + I GH + S + ++ RS
Sbjct: 256 GKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTRS 296
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 76.5 bits (189), Expect = 1e-16
Identities = 45/270 (16%), Positives = 81/270 (30%), Gaps = 40/270 (14%)
Query: 13 DPDTKPIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDSPHT-DVFSYAH 64
D I HG S ++W +R +A R HG S D H
Sbjct: 19 PRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRV----VAHDRRGHGRSSQVWDGHDMDH 74
Query: 65 LAEDVKYFLETESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPTLRH 123
A+DV + I A +GHS GG + Y+A V+ +++ P + T +
Sbjct: 75 YADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGN 134
Query: 124 MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHM 183
GL ++ +++ R + + + + +
Sbjct: 135 PGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVE--ASEGIIGNW------WR 186
Query: 184 INFPQPGEKTYGG------------------PTLFIGGGRSDFIRQED-HPGIKSLFPRA 224
+ Y G P L + G + E+ L P
Sbjct: 187 QGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNG 246
Query: 225 EITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254
+ + H + + D+ ++ F RS
Sbjct: 247 ALKTYKGYPHGMPTTHADVINADLLAFIRS 276
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 75.4 bits (186), Expect = 2e-16
Identities = 39/244 (15%), Positives = 80/244 (32%), Gaps = 25/244 (10%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAI-HRKTKKKIA---RNHGDSPHTDVFSYAHLAEDVKYF 72
++ +HG + + L K + I + HG+S + ++V F
Sbjct: 17 NTLLFVHGSGCNLKIFGELEKYLEDYNC---ILLDLKGHGESKGQCPSTVYGYIDNVANF 73
Query: 73 LE----TESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLF 128
+ T+ ++G+SMGG ++ +AL V ++ + M ++
Sbjct: 74 ITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIY 133
Query: 129 D-AMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFP 187
+ + L E G + + + + L D+ + C L L N I+
Sbjct: 134 HNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIM-INDLIACKLIDLVDNLKN--IDI- 189
Query: 188 QPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDK 247
P I E IK +E+ E H++ ++
Sbjct: 190 ---------PVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLVVNAKGVAEE 240
Query: 248 VVDF 251
+ +F
Sbjct: 241 IKNF 244
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 75.2 bits (184), Expect = 4e-16
Identities = 40/258 (15%), Positives = 81/258 (31%), Gaps = 21/258 (8%)
Query: 11 PVDPDTKPIIIMHGLLGSKNNWNS--LAKAIHRKTKKKIARNHGDSP-----------HT 57
P I H + + + ++ + R H D+P
Sbjct: 30 TPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGY 89
Query: 58 DVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGV 117
S LA+ + L+ + + +G G + AL +P V L++++I P
Sbjct: 90 QYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAK 149
Query: 118 SPTLR---HMSGLFDAMKSVNLDEL-SGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLD 173
++GL ++ + L L S + L +++ K + I
Sbjct: 150 GWMDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELY--- 206
Query: 174 SLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAG 233
+ +NF + GE T P + + G ++ K + + D+G
Sbjct: 207 -WNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSG 265
Query: 234 HWVHSQKPDLFVDKVVDF 251
+P + F
Sbjct: 266 GQPQLTQPGKLTEAFKYF 283
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 73.8 bits (182), Expect = 8e-16
Identities = 48/269 (17%), Positives = 81/269 (30%), Gaps = 56/269 (20%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHT--DVFSYAHLAEDVK 70
++++ GL GS + W + + + R G++P T + +S A +A ++
Sbjct: 17 VVVLISGLGGSGSYWLPQLAVLEQEYQV---VCYDQRGTGNNPDTLAEDYSIAQMAAELH 73
Query: 71 YFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDA 130
L I V+GH++G M LAL P V+ LI V+ + T R F
Sbjct: 74 QALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRR----CFQV 129
Query: 131 MKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPG 190
L A + L A W + Q
Sbjct: 130 R----ERLLYSGGAQAWVEAQPLFLYPAD--------WMAARAPRLEAEDALALAHFQGK 177
Query: 191 EKTYGG-------------------PTLFIGGGRSDFIR-----QEDHPGIKSLFPRAEI 226
P I D + E H + P ++
Sbjct: 178 N-NLLRRLNALKRADFSHHADRIRCPVQII-CASDDLLVPTACSSELHAAL----PDSQK 231
Query: 227 TYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
+ GH + P+ F +++ SL
Sbjct: 232 MVMPYGGHACNVTDPETFNALLLNGLASL 260
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 74.0 bits (182), Expect = 1e-15
Identities = 32/256 (12%), Positives = 69/256 (26%), Gaps = 22/256 (8%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKK--IA---RNHGDS--PHTDVFSY--A 63
+ + ++HG G N L + + + + R G S D +
Sbjct: 22 PVEGPALFVLHGGPGG--NAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVD 79
Query: 64 HLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRH 123
L ED E + + +L H G + + P ++++
Sbjct: 80 ALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLA 139
Query: 124 MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQ----- 178
+ + + + + D+ + + W +
Sbjct: 140 EAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAY-EWLAEGAGILGSDAPGL 198
Query: 179 --FFNHMINFPQPGE-KTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHW 235
N + P + G D + S RA I + +AGH+
Sbjct: 199 AFLRNGLWRLDYTPYLTPERRPLYVL-VGERDGTSYPYAEEVASR-LRAPIRVLPEAGHY 256
Query: 236 VHSQKPDLFVDKVVDF 251
+ P+ F + +
Sbjct: 257 LWIDAPEAFEEAFKEA 272
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase;
2.60A {Pseudomonas putida}
Length = 264
Score = 72.5 bits (178), Expect = 2e-15
Identities = 28/257 (10%), Positives = 68/257 (26%), Gaps = 25/257 (9%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAI---HRKTKKKIA---RNHGDS--PHTDVFSYAH 64
DP + ++ G + +LA + I R H D F
Sbjct: 18 DPHAPTLFLLSGWCQDHRLFKNLAPLLARDFHV----ICPDWRGHDAKQTDSGD-FDSQT 72
Query: 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALA-NPHLVSSLIVVDISPVGVSPTLRH 123
LA+D+ F++ + I ++ S G + + + I++D +
Sbjct: 73 LAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQ 132
Query: 124 MSGLFDAMKSVNLDE------LSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQT 177
++ + V + V + + +WQ ++
Sbjct: 133 LAEGQHPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGE-----MWQRACREIEA 187
Query: 178 QFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH 237
+ + I ++ + +I H+
Sbjct: 188 NYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPS 247
Query: 238 SQKPDLFVDKVVDFYRS 254
+ P + +F ++
Sbjct: 248 LENPVAVAQAIREFLQA 264
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged
active site, prolyl peptidase; 1.80A {Thermoplasma
acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A
1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A*
1xqx_A* 1xqy_A 1xqv_A
Length = 293
Score = 68.8 bits (169), Expect = 8e-14
Identities = 46/280 (16%), Positives = 85/280 (30%), Gaps = 56/280 (20%)
Query: 13 DPDTK-PIIIMHGLLGSKNNWN----SLAKAIHRKTKKKIA---RNHGDS--PHTDVFSY 62
P+ K ++ MHG G +++ + K + G S P F+
Sbjct: 24 APEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITV----LFYDQFGCGRSEEPDQSKFTI 79
Query: 63 AHLAEDVKYFLET-ESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPT 120
+ E+ + + ++G S GG A+ Y A+ + LIV V T
Sbjct: 80 DYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAY-AVKYQDHLKGLIVSGGLS-SVPLT 137
Query: 121 LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFF 180
++ M+ L D + + D + + + + AV+ Q + +
Sbjct: 138 VKEMNRLIDELPAKYRDAI--KKYGSSGSYENPEYQEAVNYFYHQ--HLLRSEDWPPEVL 193
Query: 181 NHMIN---------FPQPGEKTYGG----------------PTLFIGGGRSDFIR----Q 211
+ P E T G PTL G D + +
Sbjct: 194 KSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLIT-VGEYDEVTPNVAR 252
Query: 212 EDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
I +E+ D H + + + + DF
Sbjct: 253 V----IHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDF 288
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure
initiative, MI center for structural genomics, MCSG;
HET: MES; 2.25A {Pseudomonas aeruginosa}
Length = 266
Score = 67.7 bits (166), Expect = 1e-13
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHTDV-FSYAHLA 66
+ + + + + + + W++ A+ H + + R HG S ++ A L
Sbjct: 24 AAEKPLLALSNSIGTTLHMWDAQLPALTRHFRV---LRYDARGHGASSVPPGPYTLARLG 80
Query: 67 EDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111
EDV L+ + +A LG S+GG +LAL P + L++ +
Sbjct: 81 EDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLAN 125
Score = 28.0 bits (63), Expect = 2.5
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 11/60 (18%)
Query: 197 PTLFIGGGRSDFIR-----QEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
PTL I G D + + I A + + A H + + P F V+ F
Sbjct: 210 PTLVIAG-AYDTVTAASHGELIAASI----AGARLVTL-PAVHLSNVEFPQAFEGAVLSF 263
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta
hydrolase, signaling protein; 2.50A {Bacillus subtilis}
PDB: 1wpr_A*
Length = 271
Score = 66.5 bits (163), Expect = 4e-13
Identities = 40/267 (14%), Positives = 82/267 (30%), Gaps = 47/267 (17%)
Query: 14 PDTKPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDS-----PHTDVFSYA 63
I+ G ++ WN++A A + I G S +
Sbjct: 18 SGKASIMFAPGFGCDQSVWNAVAPAFEEDHRV---ILFDYVGSGHSDLRAYDLNRYQTLD 74
Query: 64 HLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRH 123
A+DV E + + +GHS+G M ++ P L S L++V SP ++ +
Sbjct: 75 GYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEY 134
Query: 124 MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHM 183
G + L L ++++K + ++ Q + ++ + +
Sbjct: 135 YGGF----EEEQLLGL--------LEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRF 182
Query: 184 INFPQPGEKTYGG-------------------PTLFIGGGRSDFIRQEDHPGIKSLFPRA 224
+ P+L + + P +
Sbjct: 183 CSTDPVI---ARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYS 239
Query: 225 EITYIEDAGHWVHSQKPDLFVDKVVDF 251
+ +E GH H PD + + D+
Sbjct: 240 SLKQMEARGHCPHMSHPDETIQLIGDY 266
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism;
1.90A {Burkholderia xenovorans}
Length = 266
Score = 66.1 bits (162), Expect = 4e-13
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 11 PVDPDTKPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSPHTDV-FSYAH 64
+ I++ + L + W A+ H + + R HG S ++
Sbjct: 21 ERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRV---LRYDTRGHGHSEAPKGPYTIEQ 77
Query: 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111
L DV ++T IA+A+ G SMGG + LA + + + + +
Sbjct: 78 LTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCN 124
Score = 30.3 bits (69), Expect = 0.54
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 15/62 (24%)
Query: 197 PTLFIGGGRSDFIRQEDHPG-------IKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVV 249
P L I G D + A DA H + ++ D F VV
Sbjct: 208 PALVISG-------THDLAATPAQGRELAQAIAGARYV-ELDASHISNIERADAFTKTVV 259
Query: 250 DF 251
DF
Sbjct: 260 DF 261
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 65.3 bits (159), Expect = 4e-13
Identities = 24/171 (14%), Positives = 47/171 (27%), Gaps = 29/171 (16%)
Query: 5 VADTETPVDPDTKPIIIMHGLLGSKNNW------NSLAKAIHRKTKKKIA---RNHGDS- 54
+ ++++HG+ S W + LA+A +R +A G S
Sbjct: 21 FREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRA----VAIDLPGLGHSK 76
Query: 55 --PHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112
+ ++ + V+ S+ G + A + + V
Sbjct: 77 EAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVA- 135
Query: 113 SPVGVSPTLRHMS-----------GLFDAMKSVNLDELSGQPLHAVRKIVD 152
P+ G D M + + L P H V +
Sbjct: 136 -PICTDKINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHRVLIMKG 185
Score = 47.2 bits (112), Expect = 9e-07
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 204 GRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
G D + Q +K L P + ++ AGH + KP+ + ++DF + L
Sbjct: 159 GDQDPMGQTSFEHLKQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, alpha-beta hydrolase fold,
hydrolase; 2.00A {Oleispira antarctica}
Length = 282
Score = 64.6 bits (158), Expect = 2e-12
Identities = 33/266 (12%), Positives = 72/266 (27%), Gaps = 45/266 (16%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAI--HRKTKKKIA---RNHGDSP-----HTDVFSYAHLA 66
K +++ HG +N W + + I G S S A
Sbjct: 29 KTVLLAHGFGCDQNMWRFMLPELEKQFTV---IVFDYVGSGQSDLESFSTKRYSSLEGYA 85
Query: 67 EDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG 126
+DV+ L + ++GHS+ + +S + ++ SP ++
Sbjct: 86 KDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFP------ 139
Query: 127 LFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINF 186
+ L + ++DK + ++ + L +
Sbjct: 140 ------PDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTT 193
Query: 187 PQPGEKTYGG------------------PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITY 228
P L + E + P +++
Sbjct: 194 DPIV--AKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNSQLEL 251
Query: 229 IEDAGHWVHSQKPDLFVDKVVDFYRS 254
I+ GH +H L ++ F ++
Sbjct: 252 IQAEGHCLHMTDAGLITPLLIHFIQN 277
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
2.20A {Unidentified}
Length = 309
Score = 62.8 bits (153), Expect = 8e-12
Identities = 32/247 (12%), Positives = 74/247 (29%), Gaps = 36/247 (14%)
Query: 35 LAKAIHRKTKKKIA---RNHGDS--PHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMG 89
+ A +R +A GDS P + + + F++ + ++ H G
Sbjct: 52 VVAAGYRA----VAPDLIGMGDSAKPDIE-YRLQDHVAYMDGFIDALGLDDMVLVIHDWG 106
Query: 90 GRAMMYLALANPHLVSSLIVVD--ISPVGVSPTLRHM----SGLFDAMKSVNLDELSGQP 143
M A NP V+++ ++ + P P+ M LF +++ ++ E
Sbjct: 107 SVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLD 166
Query: 144 LHAVRKIVDKALATAVDL-----------------KGKQIIWQCNLD-SLQTQFFNHMIN 185
+ + + + L + + W + + F +
Sbjct: 167 GNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVL 226
Query: 186 FPQPGEKTYGGPTLFIGGGRSDFIRQEDH-PGIKSLFPRAEITYIEDAGHWVHSQKPDLF 244
P L + + + P E+ ++ H++ P L
Sbjct: 227 KNGEWLMASPIPKLLFHAEP-GALAPKPVVDYLSENVPNLEVRFVGAGTHFLQEDHPHLI 285
Query: 245 VDKVVDF 251
+ D+
Sbjct: 286 GQGIADW 292
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 62.5 bits (152), Expect = 1e-11
Identities = 42/257 (16%), Positives = 78/257 (30%), Gaps = 32/257 (12%)
Query: 18 PIIIMHGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDS---PHTDVFSYAHLAE 67
+ +HG + A R +A G S V+++
Sbjct: 48 TFLCLHGEPSWSFLYRKMLPVFTAAGGRV----VAPDLFGFGRSDKPTDDAVYTFGFHRR 103
Query: 68 DVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDIS-PVGVSPTLRHMSG 126
+ FL+ + + ++ GG + L + P LV LIV++ + VG+SP S
Sbjct: 104 SLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESW 163
Query: 127 LFDAMKSVNLDE--LSGQPLH----AVRKIVDKALATAVDLKG-----KQIIWQCNLDSL 175
S +LD L + + A D G + +++
Sbjct: 164 RDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGA 223
Query: 176 QTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRA-EITYIEDAGH 234
+ + GPT G + + E ++ E +E GH
Sbjct: 224 EIG-----RQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGH 278
Query: 235 WVHSQKPDLFVDKVVDF 251
+V + + F
Sbjct: 279 FVQEHGEPIARAALAAF 295
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like
hydrolase, structural genomi center for structural
genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm
1728}
Length = 207
Score = 61.4 bits (149), Expect = 1e-11
Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 18/135 (13%)
Query: 4 KVADTETPVDPDTKPIIIMHGLLGSKNNW------NSLAKAIHRKTKKKIA---RNHGDS 54
+V + D + + I + HG + +W N+ +K + A G S
Sbjct: 15 RVFQRKMVTDSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNV----YAPDYPGFGRS 70
Query: 55 -----PHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109
D H AE ++ +L+ +A++ ++G SMGG ++ L P +V +I
Sbjct: 71 ASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIA 130
Query: 110 VDISPVGVSPTLRHM 124
V + V
Sbjct: 131 VAPAWVESLKGDMKK 145
Score = 46.8 bits (111), Expect = 2e-06
Identities = 18/82 (21%), Positives = 32/82 (39%)
Query: 174 SLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAG 233
+ + K TL + G + + S+ + + +E +G
Sbjct: 126 DGIIAVAPAWVESLKGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSG 185
Query: 234 HWVHSQKPDLFVDKVVDFYRSL 255
H V+ +KP+ FV VDF R+L
Sbjct: 186 HPVYIEKPEEFVRITVDFLRNL 207
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 61.7 bits (150), Expect = 2e-11
Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 35/272 (12%)
Query: 13 DPDTKPIIIM-HGLLGSKNNW----NSLAKAIHRKTKKKIA---RNHGDS---PHTDVFS 61
+ D + + + HG + A++ R IA G S + ++
Sbjct: 43 NSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARV----IAPDFFGFGKSDKPVDEEDYT 98
Query: 62 YAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV-------VDISP 114
+ + +E + ++ GG + L +A+P LI+ ++
Sbjct: 99 FEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQ 158
Query: 115 VGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIV-----------DKALATAVDLKG 163
S + + F A K + + +++ G
Sbjct: 159 PAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAG 218
Query: 164 KQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPR 223
+ + + + + G T G + + + +K+L
Sbjct: 219 -VRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALING 277
Query: 224 A-EITYIEDAGHWVHSQKPDLFVDKVVDFYRS 254
E I DAGH+V + + + F +
Sbjct: 278 CPEPLEIADAGHFVQEFGEQVAREALKHFAET 309
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 60.4 bits (147), Expect = 4e-11
Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 47/254 (18%)
Query: 13 DPDTKP-IIIMHGLLGSKNNWNSLAKAIHRK-TKKKIA------RNHGDS--PHTDVFSY 62
+P+ P II+HG G A+ + +A HG S D +
Sbjct: 23 NPEKCPLCIIIHGFTGHSEER--HIVAVQETLNEIGVATLRADMYGHGKSDGKFED-HTL 79
Query: 63 AHLAEDVK----YFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVS 118
++ Y + + + + GHS GG ++M A ++ +LI +SP
Sbjct: 80 FKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIP--LSPA--- 134
Query: 119 PTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQ 178
+ ++ + + K + + +D + + + QT
Sbjct: 135 AMIPEIARTGELLG---------------LKFDPENIPDELDAWDGRKLKGNYVRVAQTI 179
Query: 179 -FFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH 237
+ + + P L + G + + + E + ++ I H
Sbjct: 180 RVEDFVDKYT--------KPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY- 230
Query: 238 SQKPDLFVDKVVDF 251
+L + V +F
Sbjct: 231 DHHLELVTEAVKEF 244
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 60.6 bits (147), Expect = 4e-11
Identities = 41/257 (15%), Positives = 73/257 (28%), Gaps = 46/257 (17%)
Query: 9 ETPVDPDTKPIIIMHGLLGSKNN--WNSLAKAIHRKTKKKIA------RNHGDSP--HTD 58
E P II HG ++N +A ++ + IA HGDS +
Sbjct: 39 EEPFGEIYDMAIIFHGFTANRNTSLLREIANSLR---DENIASVRFDFNGHGDSDGKFEN 95
Query: 59 VFSYAHLAEDVK----YFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114
+ + ED Y + ++GH+ GG LA P L+ +++ ++P
Sbjct: 96 -MTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVL--LAP 152
Query: 115 VGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDS 174
L + V + + + K + +
Sbjct: 153 AATL----KGDALEGNTQGVTYNP--------------DHIPDRLPFKDLTLGGFYLRIA 194
Query: 175 LQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGH 234
Q + F P I G + ++ + + IE A H
Sbjct: 195 QQLPIYEVSAQFT--------KPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADH 246
Query: 235 WVHSQKPDLFVDKVVDF 251
V+ DF
Sbjct: 247 CFSDSYQKNAVNLTTDF 263
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain,
catalytic triad (A His272, Glu130), mutant, I135F,
haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A
3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A
Length = 299
Score = 59.6 bits (145), Expect = 1e-10
Identities = 33/227 (14%), Positives = 64/227 (28%), Gaps = 26/227 (11%)
Query: 52 GDS--PHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109
G S P D + + + F+E + + ++ H G + A NP V +
Sbjct: 70 GKSDKPDLD-YFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIAC 128
Query: 110 VD--ISPVGVSPTLRHMSGLFDAMKSV----------NLDELSGQPLHAVRKIVD----- 152
++ F A ++ N P VR + +
Sbjct: 129 MEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDH 188
Query: 153 --KALATAVDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGE--KTYGGPTLFIGGGRSDF 208
+ VD + + L + + N + P L G
Sbjct: 189 YREPFLKPVDREP-LWRFPNELP-IAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVL 246
Query: 209 IRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
I + + P + I H++ PDL ++ + +L
Sbjct: 247 IPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL 293
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 59.6 bits (143), Expect = 1e-10
Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 46/263 (17%)
Query: 18 PIIIMHGLLGSKNNWN-SLAKAIHRKTKKKIA---RNHGDSPHTDV--------FSYAHL 65
I +G+ + ++ S+ + R R H P + ++
Sbjct: 67 VTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTW 126
Query: 66 AEDVKYFL----ETESIAQADVLGHSMGGR-AMMYLALANPHLVSSLIVVDISPVGVSPT 120
D+K + + + G S GG A+ Y +L + + LI++D P
Sbjct: 127 ISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIR 186
Query: 121 LRHMSGLFDAMKSVNLDELSGQPLHA--VRKIVDKALAT---AVDLKGKQIIWQCNLDSL 175
+ + ++++ + + P I ALA + I +DSL
Sbjct: 187 PKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSL 246
Query: 176 QTQFFNHMINFPQPGEK----------TYGGPTLFIGGGRS-----------DFIRQEDH 214
+ ++P ++ Y L + F+ +
Sbjct: 247 YVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFG 306
Query: 215 PGIKS---LFPRAEITYIEDAGH 234
I L +EI ++ GH
Sbjct: 307 IQIFDSKILPSNSEIILLKGYGH 329
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus
subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A*
2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A
3qmm_A
Length = 181
Score = 56.3 bits (136), Expect = 5e-10
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAIHRK---TKKKIARNHGDSPHTDVFSYAHLAEDVKYFLE 74
P++++HG+ G+ N+ + + + K A + D T+ + L+ V+ L+
Sbjct: 5 PVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLD 64
Query: 75 TESIAQADVLGHSMGGRAMMYLA--LANPHLVSSLI 108
+ D++ HSMGG +Y L + V++++
Sbjct: 65 ETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 100
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A
{Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Length = 316
Score = 56.9 bits (138), Expect = 1e-09
Identities = 23/236 (9%), Positives = 57/236 (24%), Gaps = 35/236 (14%)
Query: 53 DSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112
P + + + F+E + A ++ G +LA P V L ++
Sbjct: 70 GKP-DIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128
Query: 113 SPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNL 172
+ H + + + + +A+ + ++++ +
Sbjct: 129 IRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPG--EGEAMILEANAFVERVLPGGIV 186
Query: 173 DSL-------------QTQFFNHMINFP-------------------QPGEKTYGGPTLF 200
L + ++ FP P L
Sbjct: 187 RKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLL 246
Query: 201 IGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSLS 256
G + E + R + + H++ D V + +
Sbjct: 247 FTGEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGIE 302
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB:
3cxu_A*
Length = 328
Score = 56.6 bits (137), Expect = 1e-09
Identities = 53/260 (20%), Positives = 83/260 (31%), Gaps = 57/260 (21%)
Query: 52 GDS---PHTDVFSYA--HLAEDVKYFLET--ESIAQADVLGHSMGGRAMMYLALANPHLV 104
GD+ P D ++ HL DV LE + + V+ H G +L L P V
Sbjct: 70 GDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKV 129
Query: 105 SSLIVVDISPVGVSPTLRHMSGL-----------FDAMKSVNLDELSGQPLHAVRKIV-- 151
+L+ + + +P + + GL + E + +V K +
Sbjct: 130 KALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILT 189
Query: 152 -----------DKALATAVDLKGKQIIW--QCNLDSLQTQF----FNHMIN----FPQPG 190
K L D W + LD +F F +N P
Sbjct: 190 YRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPINW 249
Query: 191 EKTYGG-------PTLFIGGGRSDFI-------RQEDHPGIKSLFPR-AEITYIEDAGHW 235
E T PT FI G D + + G K P E+ +E A H+
Sbjct: 250 ELTAPWTGAQVKVPTKFIVGEF-DLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHF 308
Query: 236 VHSQKPDLFVDKVVDFYRSL 255
V ++P + DF +
Sbjct: 309 VSQERPHEISKHIYDFIQKF 328
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism,
detoxification, magnesium, metal-binding, peroxisome;
HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P*
1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A*
1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Length = 555
Score = 56.1 bits (135), Expect = 2e-09
Identities = 46/290 (15%), Positives = 101/290 (34%), Gaps = 48/290 (16%)
Query: 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNH---GDS---PHTDVFSYAHLAED 68
+ + HG S +W A+ + + +A + G+S P + + L ++
Sbjct: 257 SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKE 316
Query: 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMS--- 125
+ FL+ ++QA +GH GG + Y+AL P V ++ ++ + +P + +
Sbjct: 317 MVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIK 376
Query: 126 --------------GLFDAMKSVNLDEL----------SGQPLHAVRKIVDKALATAVDL 161
G+ +A NL S +H V + + + +
Sbjct: 377 ANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEP 436
Query: 162 KGKQIIWQCNLDSLQTQF----FNHMINF------PQPGEKTYGGPTL-----FIGGGRS 206
+++ + + QF F +N+ G + + +
Sbjct: 437 SLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKD 496
Query: 207 DFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSLS 256
+ + ++ P + +IED GHW KP ++ + S +
Sbjct: 497 FVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDA 546
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase,
luciferase, oxidoreductase; 1.40A {Renilla reniformis}
PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Length = 318
Score = 55.5 bits (134), Expect = 3e-09
Identities = 25/231 (10%), Positives = 68/231 (29%), Gaps = 27/231 (11%)
Query: 49 RNHGDS--PHTDVFSYAHLAEDVKYFLETESIAQADVL-GHSMGGRAMMYLALANPHLVS 105
G S + + + + E ++ + + GH G + A + +
Sbjct: 78 IGMGKSGKSGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIK 137
Query: 106 SLIVVD--ISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAV---- 159
+++ ++ + + + +KS +++ + V ++ + +
Sbjct: 138 AIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEE 197
Query: 160 ------------DLKGKQIIWQCNLDSLQTQFFNHMINFP--QPGEKTYGG-PTLFIGGG 204
+++ + W + ++ + + + P LFI
Sbjct: 198 FAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESD 257
Query: 205 RSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
F G K FP E + H++ PD + F +
Sbjct: 258 P-GFFSNAIVEGAK-KFPNTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERV 305
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane
dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase;
0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB:
1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A
1iz8_A* 1k5p_A 1k63_A 1k6e_A
Length = 302
Score = 54.4 bits (131), Expect = 7e-09
Identities = 36/233 (15%), Positives = 63/233 (27%), Gaps = 29/233 (12%)
Query: 49 RNHGDS---PHTDVFSY--AHLAEDVKYFLETESIAQADVL-GHSMGGRAMMYLALANPH 102
GDS + Y A + + E + VL H G A +
Sbjct: 64 IGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRE 123
Query: 103 LVSSLIVVD--ISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIV--------- 151
V + ++ P+ + LF A +S +EL Q V +++
Sbjct: 124 RVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLS 183
Query: 152 -------DKALATAVDLKGKQIIWQCNLDSLQTQFFNHMI--NFPQPGEKTYGGPTLFIG 202
+ A + + + W + T I ++ P LFI
Sbjct: 184 EAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDY-AGWLSESPIPKLFIN 242
Query: 203 GGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
+ +P H++ PD + F R L
Sbjct: 243 AEP-GALTTGRMRDFCRTWPNQTEI-TVAGAHFIQEDSPDEIGAAIAAFVRRL 293
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei
structural genomics consortium, TBSGC, hydrolase; 1.19A
{Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Length = 297
Score = 54.0 bits (130), Expect = 8e-09
Identities = 31/232 (13%), Positives = 70/232 (30%), Gaps = 27/232 (11%)
Query: 49 RNHGDS---PHTDVFSY--AHLAEDVKYFLETESIAQADVL-GHSMGGRAMMYLALANPH 102
G S + Y + + + + VL H G A +
Sbjct: 63 IGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRD 122
Query: 103 LVSSLIVVD--ISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVD 160
V + ++ ++P+ + + G+F +S + ++ + V +++ A+ +
Sbjct: 123 RVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLS 182
Query: 161 LKGKQIIWQCNLDS--LQTQFFNHMINFPQPGE---------------KTYGGPTLFIGG 203
+ + ++ + + N P GE + P LFI
Sbjct: 183 DEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINA 242
Query: 204 GRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYRSL 255
I ++ +P + H+V P+ + F R L
Sbjct: 243 EPGAIITGRIRDYVR-SWPNQTEITV-PGVHFVQEDSPEEIGAAIAQFVRRL 292
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 53.6 bits (129), Expect = 8e-09
Identities = 43/259 (16%), Positives = 84/259 (32%), Gaps = 50/259 (19%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSP----HTDVFSYAHLAEDV 69
+ ++++HG G+ + L + + K A + HG P HT + +
Sbjct: 17 RAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNG 76
Query: 70 KYFLETESIAQADVLGHSMGGRAMMYLALANPH----LVSSLIVVDISPVGVSPTLRHMS 125
FL+ + + V G S+GG + L P + + + + L +
Sbjct: 77 YEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEYAR 136
Query: 126 GLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMIN 185
+E Q + ++ K L +L + +LD +
Sbjct: 137 EYKKREGKS--EEQIEQEMEKFKQTPMKTLKALQEL--IADVRD-HLDLIYA-------- 183
Query: 186 FPQPGEKTYGGPTLFIGGGR--------SDFIRQEDHPGIKSLFPRAEITYIEDAGHWVH 237
PT + ++ I E I+S P +I + E +GH +
Sbjct: 184 -----------PTFVVQARHDEMINPDSANIIYNE----IES--PVKQIKWYEQSGHVIT 226
Query: 238 SQK-PDLFVDKVVDFYRSL 255
+ D + + F SL
Sbjct: 227 LDQEKDQLHEDIYAFLESL 245
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 51.5 bits (123), Expect = 5e-08
Identities = 32/265 (12%), Positives = 81/265 (30%), Gaps = 46/265 (17%)
Query: 9 ETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA------RNH-GDSP-HTDVF 60
+ V I+I G +++ LA+ + +H G S D F
Sbjct: 28 KENVPFKNNTILIASGFARRMDHFAGLAEYLS---TNGFHVFRYDSLHHVGLSSGSIDEF 84
Query: 61 SYAHLAEDVKY---FLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGV 117
+ + +L+T+ ++ S+ R + ++ L S ++ + V +
Sbjct: 85 TMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVI-SDLEL--SFLITAVGVVNL 141
Query: 118 SPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQT 177
TL G + P+ L +D +G ++ + +
Sbjct: 142 RDTLEKALG----------FDYLSLPI--------DELPNDLDFEGHKLGSEVFVRDCFE 183
Query: 178 QFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLF-----PRAEITYIEDA 232
++ + + P + D+++QE+ + + ++ + +
Sbjct: 184 HHWDTLDSTLDKVAN-TSVPLIAFTANNDDWVKQEE---VYDMLAHIRTGHCKLYSLLGS 239
Query: 233 GHWVHS--QKPDLFVDKVVDFYRSL 255
H + F V ++
Sbjct: 240 SHDLGENLVVLRNFYQSVTKAAIAM 264
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase;
1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A
3pi6_A
Length = 301
Score = 49.9 bits (120), Expect = 2e-07
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 197 PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
PT+ + GG + + +K+ E + GHW+ + V+DF
Sbjct: 236 PTMTLAGGGAGGMGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDF 290
Score = 39.9 bits (94), Expect = 4e-04
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 52 GDS--PHTDVFSYAHLAEDVKYFLETESIAQA-DVLGHSMGGRAMMYLALANPHLVSSLI 108
G S P T +S +A + S + D++ H +G + + N ++ L+
Sbjct: 68 GQSEPPKTG-YSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLV 126
Query: 109 VVDISPVGVSP 119
++
Sbjct: 127 YMEAPIPDARI 137
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic
acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET:
2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D
1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A
2es4_A 1tah_B 1qge_D 1qge_E
Length = 320
Score = 48.9 bits (116), Expect = 4e-07
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 18 PIIIMHGLLGSK------NNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVFSYAHLAED 68
PII++HGL G+ W + + + ++ + L
Sbjct: 10 PIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNG-RGEQLLAY 68
Query: 69 VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110
VK L + +++GHS GG Y+A P LV+S+ +
Sbjct: 69 VKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTI 110
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold,
epoxide degradation, epichlorohydrin; 2.10A
{Agrobacterium tumefaciens} SCOP: c.69.1.11
Length = 294
Score = 48.4 bits (116), Expect = 7e-07
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 197 PTLFIGGGRSDFIRQED-HPGIKSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDFYR 253
P I G + + + + IED GH++ +KP++ +D++ +R
Sbjct: 237 PVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294
Score = 48.0 bits (115), Expect = 9e-07
Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Query: 52 GDS---PHTDVFSY--AHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSS 106
GDS D+ Y A+D L+ I +A V+GH + V
Sbjct: 67 GDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIK 126
Query: 107 LIVVDISPVGVSPTLRHMS 125
+ D P +
Sbjct: 127 AAIFDPIQPDFGPVYFGLG 145
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 47.6 bits (113), Expect = 1e-06
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 8/100 (8%)
Query: 19 IIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVF---SYAHLAEDVKYF 72
++++H GS N+ N +A+A+ R HG D+ + +
Sbjct: 25 VVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAA 84
Query: 73 LE--TESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVV 110
+ T A+ V G S+GG M P + + +
Sbjct: 85 VAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFS 124
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A
{Burkholderia SP} PDB: 1y37_A
Length = 304
Score = 45.3 bits (108), Expect = 6e-06
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 53 DSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112
+P +S+ +A D + + T + ++GH+ GGR +AL +P V SL V+DI
Sbjct: 70 GAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDI 129
Query: 113 SPVGVSP 119
P V
Sbjct: 130 IPTYVMF 136
Score = 40.0 bits (94), Expect = 4e-04
Identities = 8/56 (14%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 197 PTLFIGGGRSDFIRQEDHPGI-KSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
P L G + + + GH+ + PD + +F
Sbjct: 234 PALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILREF 288
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida
antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A*
1tcc_A*
Length = 317
Score = 44.8 bits (105), Expect = 1e-05
Identities = 14/141 (9%), Positives = 38/141 (26%), Gaps = 18/141 (12%)
Query: 13 DPDTKPIIIMHGLLGSKNNW--NSLAKAIHRKTKKKIARNHGDSPHTDVFSYA-HLAEDV 69
+KPI+++ G + ++ + + D ++ +
Sbjct: 28 SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAI 87
Query: 70 KYFLETESIAQADVLGHSMGGRAMMY---------------LALANPHLVSSLIVVDISP 114
+ VL S GG + +A A + + L +
Sbjct: 88 TALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDAL 147
Query: 115 VGVSPTLRHMSGLFDAMKSVN 135
+P++ + ++
Sbjct: 148 AVSAPSVWQQTTGSALTTALR 168
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate
inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa}
SCOP: c.69.1.18
Length = 285
Score = 44.7 bits (105), Expect = 1e-05
Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 18 PIIIMHGLLGSK-----NNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYA-HLAEDVKY 71
PI++ HG+LG + W + A+ R + L + V+
Sbjct: 9 PIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVS--QLDTSEVRGEQLLQQVEE 66
Query: 72 FLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108
+ + +++GHS GG + Y+A P L++S
Sbjct: 67 IVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASAT 103
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural
mycobacterium tuberculosis structural proteomics
project, X hydrolase; 2.10A {Mycobacterium tuberculosis}
PDB: 2zjf_A*
Length = 356
Score = 44.6 bits (105), Expect = 1e-05
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 197 PTLFIGGGR--SDFIRQEDHPGIKSLFPRAE-ITYIEDAGHWVHSQKPDLFVDKVVDFYR 253
P LFIGG + + P I D GHW+ + P+ ++DF
Sbjct: 293 PALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLG 352
Query: 254 SL 255
L
Sbjct: 353 GL 354
Score = 38.8 bits (90), Expect = 0.001
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 52 GDS---PHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108
G S + L DV L++ QA V+GH G A +P + ++
Sbjct: 66 GRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVV 125
Query: 109 VVDISPVGVSPTLRHMSGLFDAMKS 133
+ + G S + S
Sbjct: 126 GISVPFAGRGVIGLPGSPFGERRPS 150
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta
hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris}
PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Length = 306
Score = 44.2 bits (105), Expect = 1e-05
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 52 GDS------PHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVS 105
G S ++ +A+ + +E + GH+ G R LAL +P +S
Sbjct: 71 GWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLS 130
Query: 106 SLIVVDISPVGV 117
L V+DI P
Sbjct: 131 KLAVLDILPTYE 142
Score = 41.1 bits (97), Expect = 2e-04
Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 197 PTLFIGGGRSDFIRQEDHPGI-KSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
P L + G + + + I ++GH++ + PD + +V F
Sbjct: 245 PMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALVRF 299
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Length = 291
Score = 43.8 bits (104), Expect = 2e-05
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 53 DSPHTDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDI 112
PH +S +A+D + Q V+GH G R LAL +PH V L ++DI
Sbjct: 70 SVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129
Query: 113 SPVGVSP 119
+P
Sbjct: 130 APTHKMY 136
Score = 42.2 bits (100), Expect = 6e-05
Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 197 PTLFIGGGRSDFIRQEDHPGI-KSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVDF 251
P L + G + R+ D + + GH++ + P+ + +F
Sbjct: 233 PVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSL-PCGHFLPEEAPEETYQAIYNF 287
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 43.4 bits (103), Expect = 3e-05
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 20/106 (18%)
Query: 49 RNHGDSP--HTDVFSYAHLAEDVKYFLETESIAQAD-------VLGHSMGGRAMMYLALA 99
HG S V + DV ++ Q D +LGHSMGG + A
Sbjct: 78 VGHGQSEGERMVVSDFHVFVRDVLQHVD---SMQKDYPGLPVFLLGHSMGGAIAILTAAE 134
Query: 100 NPHLVSSLIV----VDISPVGVSP----TLRHMSGLFDAMKSVNLD 137
P + +++ V +P + + ++ + + S +D
Sbjct: 135 RPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPID 180
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic
residues, glycoprotein, hydrolase, lipid degradation,
zymogen, disulf; HET: NAG BTB; 1.49A {Candida
antarctica} PDB: 3icw_A*
Length = 316
Score = 43.2 bits (101), Expect = 3e-05
Identities = 14/141 (9%), Positives = 38/141 (26%), Gaps = 18/141 (12%)
Query: 13 DPDTKPIIIMHGLLGSKNNW--NSLAKAIHRKTKKKIARNHGDSPHTDVFSYA-HLAEDV 69
+KPI+++ G + ++ + + D ++ +
Sbjct: 62 SSVSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQVNTEYMVNAI 121
Query: 70 KYFLETESIAQADVLGHSMGGRAMMY---------------LALANPHLVSSLIVVDISP 114
+ VL S GG + +A A + + L +
Sbjct: 122 TTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDAL 181
Query: 115 VGVSPTLRHMSGLFDAMKSVN 135
+P++ + ++
Sbjct: 182 AVSAPSVWQQTTGSALTTALR 202
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 43.1 bits (102), Expect = 4e-05
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 20/106 (18%)
Query: 49 RNHGDSP--HTDVFSYAHLAEDVKYFLETESIAQAD-------VLGHSMGGRAMMYLALA 99
HG S V + DV ++ Q D +LGHSMGG + A
Sbjct: 96 VGHGQSEGERMVVSDFHVFVRDVLQHVD---SMQKDYPGLPVFLLGHSMGGAIAILTAAE 152
Query: 100 NPHLVSSLIV----VDISPVGVSP----TLRHMSGLFDAMKSVNLD 137
P + +++ V +P + + ++ + + +D
Sbjct: 153 RPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPID 198
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid
indole alkaloids, PNAE, hydrolase, serine esterase; HET:
CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Length = 264
Score = 43.0 bits (101), Expect = 4e-05
Identities = 32/258 (12%), Positives = 74/258 (28%), Gaps = 22/258 (8%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPH--TDVFSYAHLAE 67
K +++HG W L + K A G +P ++ ++ +E
Sbjct: 7 AKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSE 66
Query: 68 DVKYFLETESIAQADVL-GHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMSG 126
+ + + + VL GHS GG ++ P +S + + + ++
Sbjct: 67 PLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMS---AMMPDPNHSLTY 123
Query: 127 LFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNHMINF 186
F+ ++ + + + + + S++ M+
Sbjct: 124 PFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTR 183
Query: 187 PQP------------GEKTYGG-PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAG 233
P + YG +I E ++ I++A
Sbjct: 184 PGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEAD 243
Query: 234 HWVHSQKPDLFVDKVVDF 251
H +P ++D
Sbjct: 244 HMGMLSQPREVCKCLLDI 261
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 42.9 bits (101), Expect = 4e-05
Identities = 29/170 (17%), Positives = 66/170 (38%), Gaps = 31/170 (18%)
Query: 9 ETPVDPDTKP---------IIIMHGLLGSKNNWNSLAKAIHRKTKKKIA------RNHGD 53
+ PV +P ++++HG G+ ++ LA+A K + HG
Sbjct: 24 QYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYA---KAGYTVCLPRLKGHGT 80
Query: 54 SP-HTDVFSYAHLAEDVKYFLE--TESIAQADVLGHSMGGRAMMYLALANPH-----LVS 105
+ ++ V+ + V G SMGG +YLA +P ++
Sbjct: 81 HYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPIN 140
Query: 106 SLIVVDISPVGVSPTL---RHMSGLFDAMKSVNLDELS--GQPLHAVRKI 150
+ + + G++ R++ + +K+ ++ EL+ P ++ ++
Sbjct: 141 AAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQL 190
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.7 bits (100), Expect = 7e-05
Identities = 44/261 (16%), Positives = 84/261 (32%), Gaps = 73/261 (27%)
Query: 16 TKPIIIMHG-----LLGSKNNW-------NSLAKAIHRKTKKKIARNHGDSPHTDVFSY- 62
T+P+ + HG LL ++ K + T+ A + +P V +
Sbjct: 6 TRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFL 65
Query: 63 AHLAEDVKYFLETESIAQAD-VLGHSMGGRAMMYLALANPH-LVSSLIVVDISPVGVSPT 120
+++ V E + Q D VL + YL + H L + L+ + + + +
Sbjct: 66 GYVSSLV----EPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKE 121
Query: 121 LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIW----QCN----L 172
L + A ++ +P K + AL AV Q++ Q N
Sbjct: 122 L--IKNYITAR------IMAKRPF---DKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYF 170
Query: 173 DSLQTQFFNHMINFPQPGEKTYGGPTLFIGGGRSDFIRQ---------EDHPGIKSLFPR 223
+ L+ + +TY +G D I+ + +F +
Sbjct: 171 EELRDLY------------QTYHV---LVG----DLIKFSAETLSELIRTTLDAEKVFTQ 211
Query: 224 AEITYIEDAGHWVH--SQKPD 242
+ W+ S PD
Sbjct: 212 G-----LNILEWLENPSNTPD 227
Score = 39.3 bits (91), Expect = 0.001
Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 56/163 (34%)
Query: 59 VFSYAHLAEDVKYFLETESIAQAD--VLGHSMG------------------------GRA 92
+ A + L+++ + AD GHS+G G
Sbjct: 1738 LMEKAAFED-----LKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMT 1792
Query: 93 MMYLALANPHLVSSLIVVDISPVGVSPTLRHMSGLFDAMKSV--NLDELSGQPLHAV--- 147
M + S+ ++ I+P V+ + +A++ V + + +G + V
Sbjct: 1793 MQVAVPRDELGRSNYGMIAINPGRVAASFSQ-----EALQYVVERVGKRTGWLVEIVNYN 1847
Query: 148 ---RKIV----DKALATAVD----LKGKQIIWQCNLDSLQTQF 179
++ V +AL T + +K ++I ++ LQ
Sbjct: 1848 VENQQYVAAGDLRALDTVTNVLNFIKLQKI----DIIELQKSL 1886
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase,
glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens}
SCOP: c.69.1.13
Length = 302
Score = 42.1 bits (98), Expect = 8e-05
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 10 TPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA-----RNHGDSPHTDVFSYAH 64
P KP+I++HGL S ++ L + I+ + + +S
Sbjct: 30 APHRASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQG 89
Query: 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114
E V + ++ +S GG L + SP
Sbjct: 90 FREAVVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSP 138
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG,
P structure initiative; 1.80A {Listeria innocua}
Length = 254
Score = 41.4 bits (96), Expect = 1e-04
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 28/116 (24%)
Query: 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKK------IARNHG---------------- 52
D PII++HG G+ ++ + +A + + + + G
Sbjct: 2 DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPI 61
Query: 53 -----DSPHTDVFSYAHLAEDV-KYFLETESIAQADVLGHSMGGRAMMYLALANPH 102
+ ++ + + Q D +GHS GG A+ Y A
Sbjct: 62 IKFGFEQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAG 117
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 41.4 bits (97), Expect = 1e-04
Identities = 32/181 (17%), Positives = 50/181 (27%), Gaps = 38/181 (20%)
Query: 1 MSFKVADTETPVD----------PDTKPIIIM-HGLLGSKNNWNSLAKAIHRKTKKKIA- 48
M K++ E PV P P ++ HG GS+++ A+
Sbjct: 2 MEAKLSSIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAVGL---GCIC 58
Query: 49 -----RNHGDSPHTDV-FSYAHLAEDVKY---FLETESIAQAD---VLGHSMGGRAMMYL 96
R H + A +D+K L + A V+G S GG +
Sbjct: 59 MTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGG--YLSA 116
Query: 97 ALANPHLVSSLIVVDISPVGVSPTLR-------HMSGLFDAMKSVNLDELSGQPLHAVRK 149
L V L + SP + + L L A +
Sbjct: 117 LLTRERPVEWLALR--SPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQ 174
Query: 150 I 150
Sbjct: 175 Y 175
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein,
structural genomics, protein structure initiative, PSI;
HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB:
1y7i_A* 1y7h_A*
Length = 273
Score = 41.1 bits (96), Expect = 2e-04
Identities = 34/252 (13%), Positives = 76/252 (30%), Gaps = 16/252 (6%)
Query: 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHT--DVFSYAHLAEDV 69
+ K +++HG +W L + K A G ++ + +
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL 62
Query: 70 KYFLETESIAQADVL-GHSMGGRAMMYLALANPHLVSSLIVVD-------ISPVGVSPTL 121
+E+ S + +L GHS+GG + P + + + + + V
Sbjct: 63 MELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQY 122
Query: 122 RHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALAT--AVDLKGKQIIWQCNLDSLQTQF 179
+ + + + L S + K LA + + +L + F
Sbjct: 123 NERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLF 182
Query: 180 FNHMINFPQPGEKTYGG-PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHS 238
+ ++ +G ++I I +E E I+ A H
Sbjct: 183 MEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAML 242
Query: 239 QKPDLFVDKVVD 250
+P +++
Sbjct: 243 CEPQKLCASLLE 254
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase,
catalysis, protonation state, AB initio calculations,
substrate bindin; 1.05A {Hevea brasiliensis} SCOP:
c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A
3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A
7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A
1dwp_A ...
Length = 257
Score = 40.4 bits (94), Expect = 3e-04
Identities = 29/251 (11%), Positives = 74/251 (29%), Gaps = 16/251 (6%)
Query: 15 DTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVFSYAHLAEDVKY 71
+++H + W+ L + K A G P + E +
Sbjct: 2 AFAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPR-QIEEIGSFDEYSEP 60
Query: 72 FLET-ESIAQAD---VLGHSMGGRAMMYLALANPHLVSSLIVVD--ISPVGVSPT--LRH 123
L E++ + ++G S GG + A +++ + + + P+ +
Sbjct: 61 LLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDK 120
Query: 124 MSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAV---DLKGKQIIWQCNLDSLQTQFF 180
+ +F K + + L ++ L + F
Sbjct: 121 LMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQ 180
Query: 181 NHMINFPQPGEKTYGG-PTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIEDAGHWVHSQ 239
N + P ++ YG +++ + + E + ++ +E H +
Sbjct: 181 NILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLT 240
Query: 240 KPDLFVDKVVD 250
K + + +
Sbjct: 241 KTKEIAEILQE 251
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein
structure in midwest center for structural genomics,
MCSG; 2.01A {Staphylococcus epidermidis}
Length = 249
Score = 39.8 bits (92), Expect = 4e-04
Identities = 19/161 (11%), Positives = 43/161 (26%), Gaps = 31/161 (19%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKK-------------------------- 46
T + +HG GS+ + + K K
Sbjct: 3 AIKTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANP 62
Query: 47 -IARNHGDSPHTDVFSYAHLAEDV-KYFLETESIAQADVLGHSMGGRAMMYLALANPHLV 104
+ D+ + + A+ ++V I Q + +GHSMG + +
Sbjct: 63 IVKVEFKDNKNGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDR 122
Query: 105 SSLIVVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLH 145
+ + + + + + + G+P
Sbjct: 123 HLPQLKKEVNIAGVY---NGILNMNENVNEIIVDKQGKPSR 160
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG,
protein structure initiative, midwest center FO
structural genomics; 2.00A {Lactobacillus plantarum}
Length = 250
Score = 38.6 bits (89), Expect = 0.001
Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 31/116 (26%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAIHRKTKKK------------------------------I 47
P+I++ G S+N ++SL + ++T KK I
Sbjct: 6 PVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVI 65
Query: 48 ARNHGDSPHTDVFSYAHLAEDVKYFL-ETESIAQADVLGHSMGGRAMMYLALANPH 102
+ ++ A L +T LGHS GG
Sbjct: 66 GFANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLK 121
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase,
hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F}
PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Length = 267
Score = 38.4 bits (89), Expect = 0.001
Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 20/263 (7%)
Query: 6 ADTETPVDPDTKP-IIIMHGLLGSKNNWNSLAKAIHRKTKKKIA---RNHGDSPHT--DV 59
E + P K +++H W + + A G +P +
Sbjct: 1 GSMEKSMSPFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQI 60
Query: 60 FSYAHLAEDVKYFLETESIAQADVL-GHSMGGRAMMYLALANPHLVSSLIVVD--ISPVG 116
+++ + F+ + + +L GH++GG A+ P +S + + +
Sbjct: 61 PNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPN 120
Query: 117 VSPT-------LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQ 169
+ T + L + + N L A K + + + +
Sbjct: 121 IDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYH--LSPIEDLALA 178
Query: 170 CNLDSLQTQFFNHMINFPQP-GEKTYGG-PTLFIGGGRSDFIRQEDHPGIKSLFPRAEIT 227
L + I+ K YG +FI +D +++E + P E+
Sbjct: 179 TALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVK 238
Query: 228 YIEDAGHWVHSQKPDLFVDKVVD 250
IE + H KP ++
Sbjct: 239 EIEGSDHVTMMSKPQQLFTTLLS 261
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 37.3 bits (86), Expect = 0.003
Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 23/160 (14%)
Query: 11 PVDPDTKPIIIM-HGLLGSKNNWNSLAKAIHRKTKKKIA------RNHGDSPHTDVF--S 61
P P P +IM GL +K + + + +A G+
Sbjct: 146 PEGPGPHPAVIMLGGLESTKEESFQMENLVLDR---GMATATFDGPGQGEMFEYKRIAGD 202
Query: 62 YAHLAEDVKYFLETESIAQAD---VLGHSMGGRAMMYLALANPHL--------VSSLIVV 110
Y V L + D VLG S+GG + A P L S L
Sbjct: 203 YEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYW 262
Query: 111 DISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKI 150
D+ + +++S + ++ + + + +I
Sbjct: 263 DLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQI 302
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A
{Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Length = 484
Score = 37.2 bits (85), Expect = 0.004
Identities = 17/131 (12%), Positives = 34/131 (25%), Gaps = 43/131 (32%)
Query: 8 TETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRK---TKKKIARNHGDSPHTDVF---- 60
+ D +P++ +HGL GS + S + + V
Sbjct: 14 VQVAAAEDFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDM 73
Query: 61 ------------------------------------SYAHLAEDVKYFLETESIAQADVL 84
+++ L + L + D++
Sbjct: 74 LFSGLGSEFGLNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLV 133
Query: 85 GHSMGGRAMMY 95
GHSMG ++
Sbjct: 134 GHSMGTFFLVR 144
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.004
Identities = 35/237 (14%), Positives = 59/237 (24%), Gaps = 89/237 (37%)
Query: 12 VDPDTKPIII-MHGLLGSKNNWNSLAKAIHRK------TKKKIARNHGDSPHTDVFSYAH 64
V+ K I + + A+HR K + P+ D + Y+H
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH 476
Query: 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHM 124
+GH HL +
Sbjct: 477 -------------------IGH---------------HLKNI----------------EH 486
Query: 125 SGLFDAMKSVNLD--------ELSGQPLHAVRKIVDKALATAVDLK--GKQIIWQCNLDS 174
+ V LD +A I++ T LK I C+ D
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN----TLQQLKFYKPYI---CDNDP 539
Query: 175 LQTQFFNHMINF-PQPGEKTYGGPTLFIGGGRSDFIRQEDHPGIKSLFPRAEITYIE 230
+ N +++F P+ E +D +R +L E + E
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKY-------TDLLRI-------ALMAEDEAIFEE 582
Score = 36.0 bits (82), Expect = 0.011
Identities = 41/252 (16%), Positives = 71/252 (28%), Gaps = 78/252 (30%)
Query: 53 DSPHTDVFSYAH-----LAEDVKYFLETESIAQ-ADVLGHSMGGRAMMYLALANPHLVSS 106
TD S A L E + L L P V
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-------DL--PREV-- 322
Query: 107 LIVVDISPVGVS---PTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVD----------- 152
+ +P +S ++R +D K VN D+L+ + ++
Sbjct: 323 ---LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT----TIIESSLNVLEPAEYRKMF 375
Query: 153 KALA---TAVDLKGK--QIIWQCNLDSLQTQFFNHMINFP----QPGEKTYGGPTLFIGG 203
L+ + + +IW + S N + + QP E T P++++
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL-- 433
Query: 204 GRSDFIRQED-----HPGI-------KSLFPRAEITYIEDA------GHWVH------SQ 239
+ + + H I K+ I D GH H +
Sbjct: 434 ---ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH--HLKNIEHPE 488
Query: 240 KPDLFVDKVVDF 251
+ LF +DF
Sbjct: 489 RMTLFRMVFLDF 500
Score = 33.3 bits (75), Expect = 0.080
Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 26/79 (32%)
Query: 28 SKNNWNSLAKAIH-----RKTKKKIARNHGD---------------------SPHTDVFS 61
WN+ ++ + K I N S +TD+
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR 569
Query: 62 YAHLAEDVKYFLETESIAQ 80
A +AED F E Q
Sbjct: 570 IALMAEDEAIFEEAHKQVQ 588
Score = 29.1 bits (64), Expect = 1.6
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 15/105 (14%)
Query: 18 PIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHG---------DSPHTDVFSYAHLAE- 67
+++ G+LGS W +A + K + + +SP T + L
Sbjct: 151 KNVLIDGVLGSGKTW--VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 68 -DVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111
D + ++ + + HS+ L + + L+V+
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRL--LKSKPYENCLLVLL 251
Score = 27.9 bits (61), Expect = 4.2
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 10/65 (15%)
Query: 135 NLDELSGQPLHAVRKIVDKALATAV-DLKGKQIIWQCNLDSLQTQF----FNHMINFPQP 189
++D +G+ + + I+ V + K + D ++ +H+I
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDV-----QDMPKSILSKEEIDHIIMSKDA 60
Query: 190 GEKTY 194
T
Sbjct: 61 VSGTL 65
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl
esterase, ferulic acid esterase, FAE_XYNZ, XYNZ,
structural genomics; 1.75A {Clostridium thermocellum}
SCOP: c.69.1.2 PDB: 1jt2_A*
Length = 268
Score = 35.9 bits (83), Expect = 0.007
Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 24/124 (19%)
Query: 13 DPDTK-PIIIM-HGLLGSKNNWNSLAKAIHRKTKKKIARNHGDS-----PHTDVFSYAHL 65
D K ++ + HG+ GS+N+W + IA P+T+
Sbjct: 57 SKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIA 116
Query: 66 AEDVKY--FLETESIAQAD-------------VLGHSMGGRAMMYLALANPHLVSSLIVV 110
+ L I + + G SMGG + L N + +
Sbjct: 117 DGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAY--IG 174
Query: 111 DISP 114
IS
Sbjct: 175 PISA 178
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein,
structural genomics, NPPSFA; 2.00A {Thermus
thermophilus} SCOP: c.69.1.39
Length = 131
Score = 34.3 bits (78), Expect = 0.012
Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETE 76
P++++ + W + + +G + + LA V F
Sbjct: 23 PPVLLVAE---EASRWPEALPEGYAFYLLDL-PGYGRT-EGPRMAPEELAHFVAGFAVMM 77
Query: 77 SIAQADVLGHSMGGRAMMYLA 97
++ VL +G +L
Sbjct: 78 NLGAPWVLLRGLGLALGPHLE 98
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 35.0 bits (80), Expect = 0.014
Identities = 21/157 (13%), Positives = 46/157 (29%), Gaps = 19/157 (12%)
Query: 2 SFKVADTETPVDPDTKP---IIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNH---GDSP 55
F P ++I G +++ L + + + D P
Sbjct: 37 GFGGGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP 96
Query: 56 H------TDVFSYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV 109
Y V+ ++ + V+GHSMGG + A + L +
Sbjct: 97 DSRGRQLLSALDYLTQRSSVRTRVDATRLG---VMGHSMGGGGSLEAAKSRTSLKA---A 150
Query: 110 VDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHA 146
+ ++ T + + + D ++ H+
Sbjct: 151 IPLTGWNTDKTWPELRTPTLVVGADG-DTVAPVATHS 186
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein,
alpha/beta-hydrolases fold, structur genomics; HET: MSE;
1.66A {Pectobacterium atrosepticum SCRI1043}
Length = 191
Score = 34.6 bits (79), Expect = 0.015
Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 19/115 (16%)
Query: 1 MSFKVADTETPVDPDTKPIIIMHGLLGS-KNNWNSLAKAIHRKTKKKIARNHGDSPHTDV 59
+ TE ++++ GL S +W S + ++ R D
Sbjct: 5 TEIDLRLTEVSQQLT---MVLVPGLRDSDDEHWQSHWERRFPHWQRIRQREW-YQADLDR 60
Query: 60 FSYAHLAEDVKYFLETESIAQAD----VLGHSMGGRAMMYLALANPHLVSSLIVV 110
+ A E ++ ++GHS G A ++ ++ +++V
Sbjct: 61 WVLAIRRE----------LSVCTQPVILIGHSFGALAACHVVQQGQEGIAGVMLV 105
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase,
biodegradation, catal; HET: PG4; 1.20A {Paucimonas
lemoignei} PDB: 2vtv_A* 2x76_A
Length = 342
Score = 34.9 bits (79), Expect = 0.018
Identities = 15/113 (13%), Positives = 29/113 (25%), Gaps = 25/113 (22%)
Query: 8 TETPVDPDTKPIIIMHG--------------LLGSKNNWNSLAKAIHRK---TKKKIARN 50
P+I +HG + G S+ + + +
Sbjct: 32 GGGSCTATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVT 91
Query: 51 HGDSPHTDVFSY--------AHLAEDVKYFLETESIAQADVLGHSMGGRAMMY 95
+ S Y A + + +Q D++ HSMG +
Sbjct: 92 YLSSSEQGSAQYNYHSSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLA 144
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 34.3 bits (78), Expect = 0.021
Identities = 24/155 (15%), Positives = 38/155 (24%), Gaps = 24/155 (15%)
Query: 19 IIIMHGLLGSKNNWNSLAKAIHRKTKKKI---ARNHGDSPHTDVFS------------YA 63
++ +HGL GSK + +L + + A HG+ S
Sbjct: 27 LLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVAL 86
Query: 64 HLAEDVKYFLETESIAQAD---VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT 120
E+ + E + G S+G L V+ G
Sbjct: 87 GFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRP---RGVLAFIGSGFPMK 143
Query: 121 LRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKAL 155
L + D L P L
Sbjct: 144 LPQGQVVEDP---GVLALYQAPPATRGEAYGGVPL 175
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease,
xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP:
c.69.1.7
Length = 313
Score = 34.8 bits (79), Expect = 0.022
Identities = 40/265 (15%), Positives = 78/265 (29%), Gaps = 44/265 (16%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIA--RNHGDSPH---TDVFSYAHLAE 67
+P KP++++HG G N K + + R G S + L
Sbjct: 31 NPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVA 90
Query: 68 DVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP-----------VG 116
D++ + + V G S G + A +P V+ L++ I G
Sbjct: 91 DIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEG 150
Query: 117 VSPTLRHM-------------SGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKG 163
S + L A + L A + AT+
Sbjct: 151 ASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVD 210
Query: 164 KQIIWQCNLDS-------LQTQFFNHMINFPQPGE------KTYGGPTLFIGGGRSDFIR 210
+ + ++ +F + F + + P + + G R D +
Sbjct: 211 EDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHG-RYDVVC 269
Query: 211 QEDHPG-IKSLFPRAEITYIEDAGH 234
+ +P+A++ +GH
Sbjct: 270 PLQSAWDLHKAWPKAQLQISPASGH 294
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal
hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Length = 306
Score = 34.3 bits (78), Expect = 0.025
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 10 TPVDPDTKPIIIM-HGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAED 68
P + +T I + G G++++ L + I IA + + L
Sbjct: 89 YPRENNTYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDSRARQLNAA 148
Query: 69 VKYFLETESIAQAD--------VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT 120
+ Y L S A + V+GHSMGG + LA P L + + ++P ++ +
Sbjct: 149 LDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPDLKA---AIPLTPWHLNKS 205
Query: 121 LRHM 124
R +
Sbjct: 206 WRDI 209
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase,
glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos
taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Length = 279
Score = 33.9 bits (77), Expect = 0.039
Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 26/137 (18%)
Query: 13 DPDT-KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVK- 70
DP P++I HG+ S N S+ KK + + + L EDV+
Sbjct: 1 DPPAPLPLVIWHGMGDSCCNPLSM-----GAIKKMVEKKIPGIHVLSLEIGKTLREDVEN 55
Query: 71 -YFLETESIAQA---------------DVLGHSMGGRAM-MYLALANPHLVSSLIVVDIS 113
+FL S + +G S GG+ + + +LI V
Sbjct: 56 SFFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115
Query: 114 PVGVS--PTLRHMSGLF 128
GV P S
Sbjct: 116 HQGVFGLPRCPGESSHI 132
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron
aquisition, structural genomics, PSI-2, protein
structure initiative; HET: CIT; 1.80A {Shigella flexneri
2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A*
3c8h_A 3mga_A*
Length = 403
Score = 33.8 bits (77), Expect = 0.040
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 83 VLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114
V G S GG + +Y L P V+ S
Sbjct: 280 VAGQSFGGLSALYAGLHWPERFGC--VLSQSG 309
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix
bundle, structural genomics protein structure
initiative; HET: PGE; 2.12A {Streptococcus mutans}
Length = 405
Score = 33.9 bits (77), Expect = 0.043
Identities = 22/207 (10%), Positives = 51/207 (24%), Gaps = 18/207 (8%)
Query: 10 TPVDPDTKPIIIM-HGLLGSK-NNWNSLAKAIHRKTKKKIA---RNHGDSPHTDVFSYAH 64
+ + +I+ G S+ + + L + + G +P+ +
Sbjct: 152 IISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVD 211
Query: 65 LAEDVKYFLETESI--AQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLR 122
+ L+ + + G S GG + + I
Sbjct: 212 ARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAV-EKDKRIKAWIASTPIYDVAEVFRI 270
Query: 123 HMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNH 182
S A + + + ++ ++ + WQ T
Sbjct: 271 SFSTALKAP----------KTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEV 320
Query: 183 MINFPQPGEKTYGGPTLFIGGGRSDFI 209
+ P+LF+ G D
Sbjct: 321 LEQAQIVDYNKIDVPSLFLVGAGEDSE 347
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI,
protein structure initiative, TB structural genomics
consortium; 1.50A {Mycobacterium tuberculosis} SCOP:
c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Length = 280
Score = 32.9 bits (75), Expect = 0.083
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 83 VLGHSMGGRAMMYLALANPHL---VSSL 107
+G SM G + + LA P +SL
Sbjct: 118 AVGLSMSGGSALILAAYYPQQFPYAASL 145
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI,
protein structure initiative, TB structural genomics
consortium, TBSGC; 2.70A {Mycobacterium tuberculosis}
SCOP: c.69.1.3
Length = 304
Score = 32.5 bits (74), Expect = 0.11
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 83 VLGHSMGGRAMMYLALANPHL---VSSL 107
V+G SM + + LA+ +P ++
Sbjct: 123 VVGLSMAASSALTLAIYHPQQFVYAGAM 150
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold,
hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus
familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Length = 377
Score = 32.7 bits (74), Expect = 0.11
Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 28/140 (20%)
Query: 17 KPIIIMHGLLGSKNNW------NSLAKAIHRKTKKKIARNHG-------------DSPHT 57
+ HGLL S NW NSLA + N DS
Sbjct: 59 PVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEF 118
Query: 58 DVFSYAHLAED-----VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIV-VD 111
FS+ +A+ + + L+ + +GHS G NP L +
Sbjct: 119 WAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYA 178
Query: 112 ISPVGVSPTLRHMSGLFDAM 131
++PV T+++ L + +
Sbjct: 179 LAPVA---TVKYTETLINKL 195
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center
for structural genomics, JCSG, protein structure INI
PSI-2; 2.12A {Shewanella oneidensis}
Length = 331
Score = 31.9 bits (72), Expect = 0.17
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 83 VLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114
++GHS GG M + L S+ + +
Sbjct: 141 LVGHSFGGLVAMEALRTDRPLFSAYLA--LDT 170
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune
system; 1.71A {Mycobacterium tuberculosis} SCOP:
c.69.1.3
Length = 280
Score = 31.4 bits (71), Expect = 0.22
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 83 VLGHSMGGRAMMYLALANPHLVSS 106
+G + GG M LA +P
Sbjct: 116 AVGAAQGGYGAMALAAFHPDRFGF 139
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET:
PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB:
1qtr_A* 1x2b_A* 1x2e_A*
Length = 317
Score = 31.7 bits (71), Expect = 0.22
Identities = 46/266 (17%), Positives = 82/266 (30%), Gaps = 47/266 (17%)
Query: 13 DPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKI----ARNHGDS---PHTDVFSYAHL 65
+P+ KP + +HG G + + + + K+ R G S D + HL
Sbjct: 34 NPNGKPAVFIHG--GPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHL 91
Query: 66 AEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLRHMS 125
D++ E + Q V G S G + A +P VS +++ I + +
Sbjct: 92 VADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQ 151
Query: 126 GLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQII---------WQCNLDSL- 175
+ + RK V A + Q+ W+ +L
Sbjct: 152 DGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLL 211
Query: 176 --------------------QTQFFNHMINFPQPG------EKTYGGPTLFIGGGRSDFI 209
+ +F H+ P + + GR D
Sbjct: 212 PSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIV-HGRYDMA 270
Query: 210 RQEDHP-GIKSLFPRAEITYIEDAGH 234
Q + + +P AE+ +E AGH
Sbjct: 271 CQVQNAWDLAKAWPEAELHIVEGAGH 296
>3llc_A Putative hydrolase; structural genomics, joint center for ST
genomics, JCSG, protein structure initiative, PSI-2;
HET: MSE PG4; 1.80A {Agrobacterium vitis}
Length = 270
Score = 31.2 bits (70), Expect = 0.28
Identities = 19/139 (13%), Positives = 36/139 (25%), Gaps = 10/139 (7%)
Query: 9 ETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRK-TKKKIA------RNHGDSP-HTDVF 60
P + I + G + A + + HG S
Sbjct: 30 RAPAQDERPTCIWLGGYRSDMT--GTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDG 87
Query: 61 SYAHLAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPT 120
+ + E+ L+ +A ++G SMGG + L + V +
Sbjct: 88 TISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAP 147
Query: 121 LRHMSGLFDAMKSVNLDEL 139
+ + EL
Sbjct: 148 DFTSDLIEPLLGDRERAEL 166
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold,
cyanogenesis; 2.50A {Arabidopsis thaliana}
Length = 258
Score = 31.1 bits (70), Expect = 0.28
Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 15/213 (7%)
Query: 51 HGDSPH--TDVFSYAHLAEDVKYFLETESIAQADVL-GHSMGGRAMMYLALANPHLVSSL 107
G P V + ++ + L++ + +L G S GG + A P + L
Sbjct: 42 SGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVL 101
Query: 108 IVVD--ISPVGVSPT------LRHMSGLFDA-MKSVNLDELSGQPLHAVRKIVDKALATA 158
+ ++ + P+ + GL D S + L K + L
Sbjct: 102 VFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQN 161
Query: 159 VDLKGKQIIWQCNLDSLQTQFFNHMINFPQPGEKTYGG-PTLFIGGGRSDFIRQEDHPGI 217
++ ++ L + F + + E+ YG +++ I + +
Sbjct: 162 CPIEDYELAKM--LHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWM 219
Query: 218 KSLFPRAEITYIEDAGHWVHSQKPDLFVDKVVD 250
F +++ I+ H V KP D +
Sbjct: 220 IDNFNVSKVYEIDGGDHMVMLSKPQKLFDSLSA 252
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural
genomics, joint CE structural genomics, JCSG, protein
structure initiative; 1.75A {Mesorhizobium loti} SCOP:
c.69.1.14
Length = 223
Score = 30.6 bits (69), Expect = 0.38
Identities = 18/137 (13%), Positives = 38/137 (27%), Gaps = 18/137 (13%)
Query: 9 ETPVDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKK----------------KIARNHG 52
+ + ++HG + LA+ I +
Sbjct: 23 LGAGKESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTR 82
Query: 53 DSPHTDVFSYAHLAEDVKYFLETESIAQADV--LGHSMGGRAMMYLALANPHLVSSLIVV 110
+ + A A + + LG+S G + L L +P +V ++
Sbjct: 83 FEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALL 142
Query: 111 DISPVGVSPTLRHMSGL 127
PV ++G+
Sbjct: 143 RPMPVLDHVPATDLAGI 159
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta
hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB:
2wkw_A*
Length = 328
Score = 30.7 bits (68), Expect = 0.44
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 78 IAQADVLGHSMGGRAMMYLALANPHLVSSLIVVD 111
+ +L HS G A NP +++++ V+
Sbjct: 197 LDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVE 230
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family,
catalytic triad, kinetics, proposed reaction mechanism;
HET: MSE; 2.01A {Agrobacterium tumefaciens}
Length = 278
Score = 30.3 bits (68), Expect = 0.45
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 13/99 (13%)
Query: 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFS-YAHLAEDVK 70
V PDT P NW + + P ++ + Y+++ E++
Sbjct: 78 VCPDTSPRGNDVP--DELTNW-------QMGKGAGFYLDATEEPWSEHYQMYSYVTEELP 128
Query: 71 YFLETE---SIAQADVLGHSMGGRAMMYLALANPHLVSS 106
+ +++ + GHSMGG M +AL NP S
Sbjct: 129 ALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKS 167
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive
mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP:
c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Length = 297
Score = 30.0 bits (67), Expect = 0.66
Identities = 19/125 (15%), Positives = 33/125 (26%), Gaps = 28/125 (22%)
Query: 13 DPDTK-PII-IMHGLLGSKNNWNSLAKAIHRKTKKKIAR------------NHGDSPHTD 58
DP+ K I +MHG ++N S + I +G +
Sbjct: 64 DPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQ 123
Query: 59 VFSYAHLAEDVKYFLETESIAQAD--------------VLGHSMGGRAMMYLALANPHLV 104
F + + S G +MGG Y+ + V
Sbjct: 124 NFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYV 183
Query: 105 SSLIV 109
+ +
Sbjct: 184 AYFMP 188
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure
initiative, midwest center for structural genomic
hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB:
3s8y_A
Length = 280
Score = 29.5 bits (66), Expect = 0.96
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 62 YAHLAEDVKYFLETE--SIAQADVLGHSMGGRAMMYLALANPHLVSS 106
Y ++ ++ +E+ + + GHSMGG + +AL NP S
Sbjct: 122 YDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQS 168
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 29.2 bits (65), Expect = 0.99
Identities = 14/136 (10%), Positives = 32/136 (23%), Gaps = 27/136 (19%)
Query: 8 TETPVDPDTKPIIIM-HGLLGSKNNWNSLAKAIHRKTKKKIARNHG----DSPHTDVFSY 62
+ P+I+ +G + + L HG + ++ +
Sbjct: 40 RDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHWAS---------HGFVVAAAETSNAGTG 90
Query: 63 AHLAEDVKYFLETESIAQAD-----------VLGHSMGGRAMMYLALANPHLVSSLIVVD 111
+ + Y + GHS GG + V + +
Sbjct: 91 REMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGS--IMAGQDTRVRTTAPIQ 148
Query: 112 ISPVGVSPTLRHMSGL 127
+G+
Sbjct: 149 PYTLGLGHDSASQRRQ 164
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein
structure initiative, MCSG, midwest center for
structural genomics; 1.8A {Bacillus subtilis} SCOP:
c.69.1.31
Length = 192
Score = 29.3 bits (65), Expect = 0.99
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 16 TKPIIIMHGLLGS-KNNWNS-LAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKYFL 73
TK + I+HG S N+W L K + + N + + + ++ L
Sbjct: 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHTL 63
Query: 74 ETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISP 114
+ ++ HS+G A++ + ++ +S
Sbjct: 64 HENTY----LVAHSLGCPAILRFLEHLQLRAALGGIILVSG 100
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta
hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces
venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A
1mnq_A
Length = 319
Score = 29.2 bits (65), Expect = 1.1
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 83 VLGHSMGGR----AMMYLALANPHLVSSLIVVDISPVG-VSPTLRHMSGLFDAMKSVNLD 137
+LGH+ G L A+ + +++VD P G P L + + + L+
Sbjct: 165 LLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELE 224
Query: 138 ELSGQPLHAVR 148
+S L A+
Sbjct: 225 PMSDARLLAMG 235
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 29.2 bits (65), Expect = 1.2
Identities = 24/168 (14%), Positives = 47/168 (27%), Gaps = 28/168 (16%)
Query: 11 PVDPDTKPIII-MHGLLGSKN-NWNSLAKAIHRKTKKKIA---RNHGDSPH-TDVFSYAH 64
P++I GL + W + + + + G S Y+
Sbjct: 187 TNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSR 246
Query: 65 LAEDVKYFLETESIAQAD---VLGHSMGGRAMMYLALANPHLVSSLIVVD---------- 111
L + V L + ++G GG AM+ L+ + + +++
Sbjct: 247 LHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASP 306
Query: 112 ----ISPVGVSPTLRHMSG-----LFDAMKSVNLDELSGQPLHAVRKI 150
P L G ++ + L Q + RK
Sbjct: 307 QKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKT 354
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide
synthase, thioesterase, 6-DEB, TE, DEBS, alpha,
beta-hydrolase; 2.80A {Saccharopolyspora erythraea}
SCOP: c.69.1.22 PDB: 1mo2_A
Length = 300
Score = 29.0 bits (65), Expect = 1.2
Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 18/110 (16%)
Query: 49 RNHGDSPHTDVFSYAHLAEDVKYFLETESIAQAD------VLGHSMGGR---AMMYLALA 99
G+ + + A +A +++ + V GHS G A+ L
Sbjct: 106 YEEGEPLPSSM---AAVAAVQ-----ADAVIRTQGDKPFVVAGHSAGALMAYALATELLD 157
Query: 100 NPHLVSSLIVVDISPVGVSPTL-RHMSGLFDAMKSVNLDELSGQPLHAVR 148
H ++++D+ P G + + L + + L A+
Sbjct: 158 RGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALG 207
>2hxr_A HTH-type transcriptional regulator CYNR; CYNR transcriptional
regulator LYSR struc genomics, PSI-2, protein structure
initiative; 2.05A {Escherichia coli} PDB: 3hfu_A
Length = 238
Score = 29.1 bits (66), Expect = 1.3
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 6/33 (18%)
Query: 132 KSVNLDELSGQPL------HAVRKIVDKALATA 158
+ V L L + L A R+ +D A
Sbjct: 118 EQVALSRLHDEKLVLLSAEFATREQIDHYCEKA 150
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A
{Pseudoalteromonas haloplanktis}
Length = 280
Score = 28.8 bits (64), Expect = 1.5
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 31/115 (26%)
Query: 23 HGLLGSKNNWNSLAKAIHRKTKKKIA--------------------RNHGDSPHTDVFS- 61
GL + N+ A A + + IA G + +
Sbjct: 52 SGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQA 111
Query: 62 --------YAHLAEDVKYFLETE--SIAQADVLGHSMGGRAMMYLALANPHLVSS 106
Y ++ ++ +E + + GHSMGG + +AL NP S
Sbjct: 112 PYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVS 166
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma,
genetic marker, cytoplasm, cytoplasmic vesicle,
polymorphism, serine esterase; 1.50A {Homo sapiens}
Length = 282
Score = 28.4 bits (63), Expect = 1.9
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 13/107 (12%)
Query: 12 VDPDTKPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHTDVFSYAHLAEDVKY 71
+ PDT P + G +W+ A + ++ ++ E++
Sbjct: 79 IAPDTSPRGC--NIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYS------YVTEELPQ 130
Query: 72 FLETE---SIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPV 115
+ + + GHSMGG + AL NP S V +P+
Sbjct: 131 LINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKS--VSAFAPI 175
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST
initiative, midwest center for structural genomics,
MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Length = 275
Score = 28.4 bits (63), Expect = 1.9
Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 11/90 (12%)
Query: 43 TKKKIARNHGDSPHTDVFSYAHLAEDVKYFLETESIAQAD-----------VLGHSMGGR 91
T I+++ P + A + F+E E Q + + GH +GG
Sbjct: 105 TPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGL 164
Query: 92 AMMYLALANPHLVSSLIVVDISPVGVSPTL 121
+++ N + + + S + ++
Sbjct: 165 FALHILFTNLNAFQNYFISSPSIWWNNKSV 194
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A
virulence facto LUNG infection; HET: MSE; 1.7A
{Streptococcus pneumoniae}
Length = 263
Score = 28.2 bits (63), Expect = 2.3
Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 28/104 (26%)
Query: 23 HGLLGSKNNWNSLAKAIHRKTKKKIARNHG--------------DSPHTDVFSYAHLAED 68
HG+ G+ N+W +++ R D+ + + Y LAE+
Sbjct: 48 HGMSGNHNSWLKRTNV------ERLLRGTNLIVVMPNTSNGWYTDTQYGFDY-YTALAEE 100
Query: 69 VKYFLETESIAQAD------VLGHSMGGRAMMYLALANPHLVSS 106
+ L+ + G SMGG LAL + S
Sbjct: 101 LPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSH 143
>3qsl_A Putative exported protein; unknown, structural genomics,
PSI-biology, midwest center FO structural genomics,
MCSG, unknown function; HET: MSE CIT; 2.00A {Bordetella
bronchiseptica}
Length = 346
Score = 28.3 bits (63), Expect = 2.5
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 110 VDISPVGVSPTLRHMS-GLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQI 166
D+ TL + G F ++ L + V K DLKG++I
Sbjct: 86 ADVVSGAFEHTLSLQAKGQFY--RAFALQGRAPMIGVGVSKKNLPGYKGPADLKGRKI 141
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 28.1 bits (62), Expect = 2.9
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 48 ARNHGDSPHTDVFSYAHLAEDVKYFLETESI--AQADVLGHSMGGRAMMYLALANPHLVS 105
++P + + ++ L+ +I + + G SMGG + P L +
Sbjct: 230 LFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFA 289
Query: 106 SLIVV 110
+ I +
Sbjct: 290 AAIPI 294
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 28.2 bits (62), Expect = 3.1
Identities = 43/241 (17%), Positives = 77/241 (31%), Gaps = 40/241 (16%)
Query: 10 TPVDPDTKP-IIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGDSPHT-DVFSYAHL-- 65
P +P P I+ M G G + A + K +A + + HL
Sbjct: 167 LPPEPGPFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKTMETLHLEY 224
Query: 66 AEDVKYFLETESIAQAD---VLGHSMGGRAMMYLALANPHLVSSLIVVDISPVGVSPTLR 122
E+ +L + + +LG S GG + +A +++ +V++ S V TLR
Sbjct: 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLR 283
Query: 123 HMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQIIWQCNLDSLQTQFFNH 182
+ G+ L V ++ T G I L+
Sbjct: 284 YK----------------GETLPPVGVNRNRIKVTK---DGYADIVDVLNSPLEGPDQKS 324
Query: 183 MINFPQPGEKTYGGPTLFIGGGRSDFIRQEDHPGI------KSLFPRAEITYIEDAGHWV 236
I P E+ LF+ G + E + + +I + GH++
Sbjct: 325 FI----PVER-AESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYI 379
Query: 237 H 237
Sbjct: 380 E 380
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM
biosynthesis, lyase; 1.84A {Homo sapiens} SCOP:
c.113.1.1
Length = 286
Score = 27.8 bits (62), Expect = 3.2
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 10/47 (21%)
Query: 190 GEKT------YG----GPTLFIGGGRSDFIRQEDHPGIKSLFPRAEI 226
G T G G T +++I + + LFP +
Sbjct: 121 GNATASLVSKIGLDTEGETCGNAEKLAEYICSRESSALPLLFPCGNL 167
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 27.7 bits (61), Expect = 3.5
Identities = 8/51 (15%), Positives = 18/51 (35%)
Query: 65 LAEDVKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLIVVDISPV 115
+ + + L + + + S G + + L + H S V+ V
Sbjct: 94 VDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVV 144
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida
antarctica} PDB: 2veo_A*
Length = 462
Score = 27.6 bits (60), Expect = 5.4
Identities = 18/155 (11%), Positives = 44/155 (28%), Gaps = 10/155 (6%)
Query: 53 DSPHTDVFSYAHLAED----VKYFLETESIAQADVLGHSMGGRAMMYLALANPHLVSSLI 108
+ + D +K + S ++ + G+S G A ++ L
Sbjct: 167 KAAFIAGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELN 226
Query: 109 VVDISPVGVSPTLRHMSGLFDAMKSVNLDELSGQPLHAVRKIVDKALATAVDLKGKQII- 167
+V S G + + + L ++ + ++ KG++ +
Sbjct: 227 IVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLK 286
Query: 168 -----WQCNLDSLQTQFFNHMINFPQPGEKTYGGP 197
C + T F ++ + P
Sbjct: 287 QIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAP 321
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural
genom consortium, NESG, alpha-beta protein, rossmann
fold, HY; 2.10A {Yersinia enterocolitica subsp}
Length = 202
Score = 27.0 bits (59), Expect = 6.0
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 17 KPIIIMHGLLGSKNNWNSLAKAIHRKTKKKIARNHGD----SPHTDVFSYAHLAEDVKYF 72
++ +HG S ++ AKA K + ++H P + AE ++
Sbjct: 3 STLLYIHGFNSSPSS----AKA--TTFKSWLQQHHPHIEMQIPQLPPYPA-EAAEMLESI 55
Query: 73 LETESIAQADVLGHSMGGRAMMYLA 97
+ ++ ++G S+GG +L+
Sbjct: 56 VMDKAGQSIGIVGSSLGGYFATWLS 80
>1al3_A Cys regulon transcriptional activator CYSB; LYSR family, cysteine
biosynthesis, transcription regulation; 1.80A
{Klebsiella aerogenes} SCOP: c.94.1.1
Length = 324
Score = 27.2 bits (61), Expect = 6.1
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 132 KSVNLDELSGQPL------HAVRKIVDKALATA 158
SV+++EL+ PL R +D A A
Sbjct: 182 GSVSIEELAQYPLVTYTFGFTGRSELDTAFNRA 214
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610,
O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A
{Bacillus anthracis str}
Length = 377
Score = 26.5 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 83 VLGHSMGG-RAMMYLALANPHLVSSLIVVDISPVGVSPT 120
V+G S GG A + A+ PH+V +I V +P T
Sbjct: 151 VMGPSAGGMIAQQW-AVHYPHMVERMIGVITNPQNPIIT 188
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0518 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,070,845
Number of extensions: 247391
Number of successful extensions: 960
Number of sequences better than 10.0: 1
Number of HSP's gapped: 846
Number of HSP's successfully gapped: 201
Length of query: 256
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 165
Effective length of database: 4,160,982
Effective search space: 686562030
Effective search space used: 686562030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.8 bits)