RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10555
(86 letters)
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 92.7 bits (231), Expect = 1e-24
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI T+ +QP+ S+ ++ I+ L +P CP E++ +M CWQ+
Sbjct: 249 VLWEIFTYG-KQPWYQLSNTEAIDCITQGRE-------LERPRACPPEVYAIMRGCWQRE 300
Query: 61 DSDRPNFREIHLFLQR 76
R + +++H LQ
Sbjct: 301 PQQRHSIKDVHARLQA 316
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 91.5 bits (228), Expect = 3e-24
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI T+ + QP+ S+ V+E I+ L +P CPKE++D+M CWQ+
Sbjct: 224 ILWEIFTYGK-QPWFQLSNTEVIECITQGRV-------LERPRVCPKEVYDVMLGCWQRE 275
Query: 61 DSDRPNFREIHLFLQR 76
R N +EI+ L
Sbjct: 276 PQQRLNIKEIYKILHA 291
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 90.7 bits (226), Expect = 5e-24
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE+ ++ QPY +S+Q VVE I + LP P +CP ++ LM ECW +
Sbjct: 219 VLWEVFSYG-LQPYCGYSNQDVVEMIRNRQV-------LPCPDDCPAWVYALMIECWNEF 270
Query: 61 DSDRPNFREIHLFLQ 75
S RP F++IH L+
Sbjct: 271 PSRRPRFKDIHSRLR 285
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 89.7 bits (223), Expect = 2e-23
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI ++ QPY + + V+ ++ + L P NCP E+++LM CW K
Sbjct: 265 VLWEIFSYG-LQPYYGMAHEEVIYYVRDGNI-------LACPENCPLELYNLMRLCWSKL 316
Query: 61 DSDRPNFREIHLFLQR 76
+DRP+F IH LQR
Sbjct: 317 PADRPSFCSIHRILQR 332
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 85.8 bits (213), Expect = 4e-22
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI T A EQPY+ S+++V+ + L +P NCP +F+LM CWQ +
Sbjct: 229 VLWEIATLA-EQPYQGLSNEQVLRFVMEGGL-------LDKPDNCPDMLFELMRMCWQYN 280
Query: 61 DSDRPNFREIHLFLQR 76
RP+F EI ++
Sbjct: 281 PKMRPSFLEIISSIKE 296
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 83.1 bits (206), Expect = 3e-21
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+WEIL +P++ + V+ I + R LP P NCP ++ LM +CW
Sbjct: 206 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYD 257
Query: 61 DSDRPNFREIHLFLQR 76
S RP F E+ L
Sbjct: 258 PSRRPRFTELKAQLST 273
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 83.5 bits (207), Expect = 3e-21
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WEI T PY + + +++ H R L QP +C E++++M CW+
Sbjct: 238 TMWEIATRGM-TPYPGVQNHEMYDYLLHGHR-------LKQPEDCLDELYEIMYSCWRTD 289
Query: 61 DSDRPNFREIHLFLQR 76
DRP F + L L++
Sbjct: 290 PLDRPTFSVLRLQLEK 305
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 83.5 bits (207), Expect = 4e-21
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI + PY S+Q V+E ++ R + P NCP ++ +M +CWQ
Sbjct: 234 LLWEIFSLG-YMPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQ 285
Query: 61 DSDRPNFREIHLFLQR 76
DRPNF I ++
Sbjct: 286 PEDRPNFAIILERIEY 301
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 82.6 bits (205), Expect = 4e-21
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+WEIL+F +QP+ ++ V+ + R LP+P CP ++ LM CW
Sbjct: 203 CMWEILSFG-KQPFFWLENKDVIGVLEKGDR-------LPKPDLCPPVLYTLMTRCWDYD 254
Query: 61 DSDRPNFREIHLFLQR 76
SDRP F E+ L
Sbjct: 255 PSDRPRFTELVCSLSD 270
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 82.3 bits (204), Expect = 7e-21
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE++T PY D + + ++ R L QP CP ++++M +CW
Sbjct: 221 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPK 272
Query: 61 DSDRPNFREIHLFLQR 76
RP+F E+ +
Sbjct: 273 AEMRPSFSELVSRISA 288
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 82.8 bits (205), Expect = 8e-21
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+WE++T+ E+PY + S+ V++ I+ R LP P++CP I+ LM +CWQ+
Sbjct: 239 VMWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPSAIYQLMMQCWQQE 290
Query: 61 DSDRPNFREIHLFLQR 76
+ RP F +I L +
Sbjct: 291 RARRPKFADIVSILDK 306
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 81.5 bits (202), Expect = 9e-21
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
+WE+ + + PYE+ S+ VVE IS R L +P ++ +M CW++
Sbjct: 195 MWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLASTHVYQIMNHCWRERP 246
Query: 62 SDRPNFREIHLFLQR 76
DRP F + L
Sbjct: 247 EDRPAFSRLLRQLAE 261
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 81.9 bits (203), Expect = 9e-21
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
+WEI + + PYE F++ EHI+ R L +P ++++ +M CW +
Sbjct: 211 MWEIYSLGK-MPYERFTNSETAEHIAQGLR-------LYRPHLASEKVYTIMYSCWHEKA 262
Query: 62 SDRPNFREIHLFLQR 76
+RP F+ + +
Sbjct: 263 DERPTFKILLSNILD 277
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 82.8 bits (205), Expect = 1e-20
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI + PY S+Q V+E ++ R + P NCP ++ +M +CWQ
Sbjct: 275 LLWEIFSLG-YMPYPSKSNQEVLEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQ 326
Query: 61 DSDRPNFREIHLFLQR 76
DRPNF I ++
Sbjct: 327 PEDRPNFAIILERIEY 342
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 81.9 bits (203), Expect = 1e-20
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WE++TF +PY+ + + R LPQP C +++ +M +CW
Sbjct: 208 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMRKCWMID 259
Query: 61 DSDRPNFREIHLFLQRKNLGYNPE 84
RP FRE+ + + + +P+
Sbjct: 260 ADSRPKFRELIIEFSK--MARDPQ 281
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 82.0 bits (203), Expect = 1e-20
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+WE+L + +PY + +++ V+ + R LP P+ CP + LM +CW K
Sbjct: 243 VMWEVLAYGE-RPYWNMTNRDVISSVEEGYR-------LPAPMGCPHALHQLMLDCWHKD 294
Query: 61 DSDRPNFREIHLFLQRKNLGYNPET 85
+ RP F +I L L +PE+
Sbjct: 295 RAQRPRFSQIVSVLD--ALIRSPES 317
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 81.6 bits (202), Expect = 2e-20
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WEI+T + PY + + ++ +R L QP C +E++DLM +CW
Sbjct: 228 TMWEIMTRGQ-TPYAGIENAEIYNYLIGGNR-------LKQPPECMEEVYDLMYQCWSAD 279
Query: 61 DSDRPNFREIHLFLQR 76
RP+F + + L+
Sbjct: 280 PKQRPSFTCLRMELEN 295
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 80.7 bits (200), Expect = 2e-20
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
+WE+ + + PY+ +++ VV +S R L +P I+ +M CW +
Sbjct: 195 MWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASDTIYQIMYSCWHELP 246
Query: 62 SDRPNFREIHLFLQ 75
RP F+++ ++
Sbjct: 247 EKRPTFQQLLSSIE 260
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 81.1 bits (201), Expect = 2e-20
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WE L++ + +PY+ V+ I R + P CP E++ LM +CW
Sbjct: 202 TMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 253
Query: 61 DSDRPNFREIHLFLQR 76
DRP+F + ++
Sbjct: 254 WEDRPDFLTVEQRMRA 269
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 82.0 bits (203), Expect = 2e-20
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE++++ E+PY + S+Q V++ + R LP P++CP ++ LM +CWQK
Sbjct: 239 VLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPAALYQLMLDCWQKD 290
Query: 61 DSDRPNFREIHLFLQR 76
++RP F +I L +
Sbjct: 291 RNNRPKFEQIVSILDK 306
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 80.7 bits (200), Expect = 2e-20
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWEI T+ PY +V E + R + +P CP+++++LM CWQ +
Sbjct: 202 LWEIATYGM-SPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNP 253
Query: 62 SDRPNFREIHLFLQR 76
SDRP+F EIH +
Sbjct: 254 SDRPSFAEIHQAFET 268
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 80.7 bits (200), Expect = 3e-20
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L EI+T R PY ++ V++++ R + +P NCP+E++ LM CW++
Sbjct: 200 LTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEELYQLMRLCWKERP 251
Query: 62 SDRPNFREIHLFLQR 76
DRP F + L+
Sbjct: 252 EDRPTFDYLRSVLED 266
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 80.7 bits (200), Expect = 3e-20
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWEI +F R PY + VV + + + P CP ++++M CW
Sbjct: 204 LWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYEVMKNCWHLDA 255
Query: 62 SDRPNFREIHLFLQR 76
+ RP+F ++ L+
Sbjct: 256 AMRPSFLQLREQLEH 270
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 81.3 bits (201), Expect = 3e-20
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE++T PY D + + ++ R L QP CP ++++M +CW
Sbjct: 285 LLWELMTRG-APPYPDVNTFDITVYLLQGRR-------LLQPEYCPDPLYEVMLKCWHPK 336
Query: 61 DSDRPNFREIHLFLQR 76
RP+F E+ +
Sbjct: 337 AEMRPSFSELVSRISA 352
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 81.3 bits (201), Expect = 3e-20
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
+WEI T PY + + + + R + +P NC E++ +M +CW
Sbjct: 295 MWEIFTLGG-SPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVP 346
Query: 62 SDRPNFREIHLFLQR 76
S RP F+++ L R
Sbjct: 347 SQRPTFKQLVEDLDR 361
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 80.8 bits (200), Expect = 4e-20
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI++ PY + + E + R L +P+NC E++DLM +CW++
Sbjct: 230 LLWEIVSLGG-TPYCGMTCAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREK 281
Query: 61 DSDRPNFREIHLFLQR 76
+RP+F +I + L R
Sbjct: 282 PYERPSFAQILVSLNR 297
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 80.0 bits (198), Expect = 5e-20
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+WE ++ + +PY V + R + P CP+E++DLM CW
Sbjct: 209 LMWEAFSYGQ-KPYRGMKGSEVTAMLEKGER-------MGCPAGCPREMYDLMNLCWTYD 260
Query: 61 DSDRPNFREIHLFLQR 76
+RP F + L L+
Sbjct: 261 VENRPGFAAVELRLRN 276
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 80.0 bits (198), Expect = 6e-20
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE+LT PY + ++ R LPQP CP ++ +M +CW+
Sbjct: 217 LLWELLTRGA-PPYRHIDPFDLTHFLAQGRR-------LPQPEYCPDSLYQVMQQCWEAD 268
Query: 61 DSDRPNFREIHLFLQR 76
+ RP FR + +++
Sbjct: 269 PAVRPTFRVLVGEVEQ 284
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 80.9 bits (200), Expect = 6e-20
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWEI +F R PY + VV + + + P CP ++D+M CW
Sbjct: 376 LWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPAVYDVMKNCWHLDA 427
Query: 62 SDRPNFREIHLFLQR 76
+ RP F ++ L+
Sbjct: 428 ATRPTFLQLREQLEH 442
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 80.0 bits (198), Expect = 7e-20
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI+T PY +R+ + R + +P NC +E++ LM +CW++
Sbjct: 241 LLWEIVTLGG-NPYPGIPPERLFNLLKTGHR-------MERPDNCSEEMYRLMLQCWKQE 292
Query: 61 DSDRPNFREIHLFLQR 76
RP F +I L++
Sbjct: 293 PDKRPVFADISKDLEK 308
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 80.0 bits (198), Expect = 7e-20
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
+WEI T PY + + + + R + +P NC E++ +M +CW
Sbjct: 249 MWEIFTLGG-SPYPGIPVEELFKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVP 300
Query: 62 SDRPNFREIHLFLQR 76
S RP F+++ L R
Sbjct: 301 SQRPTFKQLVEDLDR 315
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 81.1 bits (200), Expect = 7e-20
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+WEIL +P++ + V+ I + R LP P NCP ++ LM +CW
Sbjct: 581 CMWEILMHG-VKPFQGVKNNDVIGRIENGER-------LPMPPNCPPTLYSLMTKCWAYD 632
Query: 61 DSDRPNFREIHLFLQR 76
S RP F E+ L
Sbjct: 633 PSRRPRFTELKAQLST 648
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 80.5 bits (199), Expect = 1e-19
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L EI+T+ R PY S+ V+ + R +P+P NCP+E++++M CW+
Sbjct: 375 LMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKNRP 426
Query: 62 SDRPNFREIHLFLQR 76
+RP F I L
Sbjct: 427 EERPTFEYIQSVLDD 441
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 79.3 bits (196), Expect = 2e-19
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWEI T PY + + + + R + +P NC E++ +M +CW
Sbjct: 283 LWEIFTLGG-SPYPGVPVEELFKLLKEGHR-------MDKPSNCTNELYMMMRDCWHAVP 334
Query: 62 SDRPNFREIHLFLQR 76
S RP F+++ L R
Sbjct: 335 SQRPTFKQLVEDLDR 349
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 78.1 bits (193), Expect = 3e-19
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WE++TF +PY V + + R L QP C +++ +M +CW
Sbjct: 206 TVWELMTFGA-EPYAGLRLAEVPDLLEKGER-------LAQPQICTIDVYMVMVKCWMID 257
Query: 61 DSDRPNFREIHLFLQR 76
++ RP F+E+ R
Sbjct: 258 ENIRPTFKELANEFTR 273
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 78.5 bits (194), Expect = 4e-19
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE + PY + S+Q+ E + R LP P CP +F LM +CW
Sbjct: 304 LLWETFSLGA-SPYPNLSNQQTREFVEKGGR-------LPCPELCPDAVFRLMEQCWAYE 355
Query: 61 DSDRPNFREIHLFLQR 76
RP+F I+ LQ
Sbjct: 356 PGQRPSFSTIYQELQS 371
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 78.7 bits (194), Expect = 5e-19
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWEI T+ PY +V E + R + +P CP+++++LM CWQ +
Sbjct: 409 LWEIATYGM-SPYPGIDLSQVYELLEKDYR-------MERPEGCPEKVYELMRACWQWNP 460
Query: 62 SDRPNFREIHLFLQR 76
SDRP+F EIH +
Sbjct: 461 SDRPSFAEIHQAFET 475
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 77.4 bits (191), Expect = 6e-19
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WE++TF +PY+ + + R LPQP C +++ +M +CW
Sbjct: 208 TVWELMTFG-SKPYDGIPASEISSILEKGER-------LPQPPICTIDVYMIMVKCWMID 259
Query: 61 DSDRPNFREIHLFLQR 76
RP FRE+ + +
Sbjct: 260 ADSRPKFRELIIEFSK 275
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 77.9 bits (192), Expect = 7e-19
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L E+ T R PY ++ V++ + R +P P CP+ + DLMC+CW+K
Sbjct: 371 LTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEP 422
Query: 62 SDRPNFREIHLFLQR 76
+RP F + FL+
Sbjct: 423 EERPTFEYLQAFLED 437
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 76.9 bits (190), Expect = 8e-19
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHF-SRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
TLWE+ T+ + +P+ + +++ I R LP+P +CP++I+++M +CW
Sbjct: 213 TLWEMFTYGQ-EPWIGLNGSQILHKIDKEGER-------LPRPEDCPQDIYNVMVQCWAH 264
Query: 60 HDSDRPNFREIHLFLQR 76
DRP F + FL
Sbjct: 265 KPEDRPTFVALRDFLLE 281
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 78.0 bits (192), Expect = 8e-19
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L E+ T R PY ++ V++ + R +P P CP+ + DLMC+CW+K
Sbjct: 454 LTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKEP 505
Query: 62 SDRPNFREIHLFLQR 76
+RP F + FL+
Sbjct: 506 EERPTFEYLQAFLED 520
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 77.3 bits (190), Expect = 1e-18
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
T+WE L++ + +PY+ V+ I R + P CP E++ LM +CW
Sbjct: 528 TMWEALSYGQ-KPYKKMKGPEVMAFIEQGKR-------MECPPECPPELYALMSDCWIYK 579
Query: 61 DSDRPNFREIHLFLQR 76
DRP+F + ++
Sbjct: 580 WEDRPDFLTVEQRMRA 595
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 75.8 bits (187), Expect = 2e-18
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 10/76 (13%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
TLWEI + +P QR ++ + LP P + +L+ C
Sbjct: 207 TLWEICSGGD-KPLSALDSQRKLQFYEDRHQ-------LPAPKAAE--LANLINNCMDYE 256
Query: 61 DSDRPNFREIHLFLQR 76
RP+FR I L
Sbjct: 257 PDHRPSFRAIIRDLNS 272
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 75.4 bits (186), Expect = 3e-18
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 21/90 (23%)
Query: 1 TLWEILTFARE--------------QPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCP 46
L+E+ T+ + ++E + + R LP+P CP
Sbjct: 206 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-------LPRPDGCP 258
Query: 47 KEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
EI+ +M ECW + + RP+FR++ L + +
Sbjct: 259 DEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 75.7 bits (187), Expect = 3e-18
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 2 LWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWE+ + PY D + + I R + P + P E++D+M CW
Sbjct: 237 LWELFSLGS-SPYPGMPVDSKFYKMIKEGFR-------MLSPEHAPAEMYDIMKTCWDAD 288
Query: 61 DSDRPNFREIHLFLQR 76
RP F++I +++
Sbjct: 289 PLKRPTFKQIVQLIEK 304
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 75.4 bits (186), Expect = 3e-18
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 20/89 (22%)
Query: 1 TLWEILTFAREQ-------------PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPK 47
TL E+LT+ + + R+V + R LP P NCP
Sbjct: 218 TLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR-------LPCPPNCPD 270
Query: 48 EIFDLMCECWQKHDSDRPNFREIHLFLQR 76
E++ LM +CW+ S+R +F+ + +
Sbjct: 271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 75.5 bits (186), Expect = 3e-18
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 21/90 (23%)
Query: 1 TLWEILTFARE--------------QPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCP 46
L+E+ T+ + ++E + + R LP+P CP
Sbjct: 237 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-------LPRPDGCP 289
Query: 47 KEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
EI+ +M ECW + + RP+FR++ L + +
Sbjct: 290 DEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 74.6 bits (184), Expect = 8e-18
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
LWEI + PY D+ + +R + P E++ M +CW
Sbjct: 239 LLWEIFSLGA-SPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHG 290
Query: 60 HDSDRPNFREIHLFLQR 76
S RP F E+ L
Sbjct: 291 EPSQRPTFSELVEHLGN 307
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 74.3 bits (183), Expect = 8e-18
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 20/89 (22%)
Query: 1 TLWEILTFAREQ-------------PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPK 47
TL+E+LT + R+ E + R LP+P CP
Sbjct: 226 TLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-------LPRPDKCPA 278
Query: 48 EIFDLMCECWQKHDSDRPNFREIHLFLQR 76
E++ LM CW+ S RP F + L+
Sbjct: 279 EVYHLMKNCWETEASFRPTFENLIPILKT 307
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 74.2 bits (183), Expect = 9e-18
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 2 LWEILTFAREQPYEDF-SDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI + PY + + + + + + QP PK I+ +M CW
Sbjct: 256 LWEIFSLGL-NPYPGILVNSKFYKLVKDGYQ-------MAQPAFAPKNIYSIMQACWALE 307
Query: 61 DSDRPNFREIHLFLQR 76
+ RP F++I FLQ
Sbjct: 308 PTHRPTFQQICSFLQE 323
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 72.3 bits (178), Expect = 5e-17
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 2 LWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
LWEI + PY D + I + + + QP +EI+ +M CW
Sbjct: 264 LWEIFSLGV-NPYPGIPVDANFYKLIQNGFK-------MDQPFYATEEIYIIMQSCWAFD 315
Query: 61 DSDRPNFREIHLFLQR 76
RP+F + FL
Sbjct: 316 SRKRPSFPNLTSFLGC 331
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 69.2 bits (170), Expect = 5e-16
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWE+LT E P+ V ++ + LP P CP+ LM +CW
Sbjct: 204 LWELLT--GEVPFRGIDGLAVAYGVAM------NKLALPIPSTCPEPFAKLMEDCWNPDP 255
Query: 62 SDRPNFREIHLFLQ 75
RP+F I L
Sbjct: 256 HSRPSFTNILDQLT 269
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 67.8 bits (166), Expect = 2e-15
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM--------LPQPINCPKEIFDL 52
L+E+ T+ + ++ + ++ LP P CP E+ +L
Sbjct: 219 VLYELFTYCD-KSCSPSAEFLRMMGCER-DVPALSRLLELLEEGQRLPAPPACPAEVHEL 276
Query: 53 MCECWQKHDSDRPNFREIHLFLQR 76
M CW DRP+F + L
Sbjct: 277 MKLCWAPSPQDRPSFSALGPQLDM 300
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 66.5 bits (162), Expect = 9e-15
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 1 TLWEILTFAREQPYEDFS-DQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
LWEI + PY D+ + +R + P E++ M +CW
Sbjct: 284 LLWEIFSLGA-SPYPGVKIDEEFCRRLKEGTR-------MRAPDYTTPEMYQTMLDCWHG 335
Query: 60 HDSDRPNFREIHLFLQR 76
S RP F E+ L
Sbjct: 336 EPSQRPTFSELVEHLGN 352
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 65.1 bits (159), Expect = 2e-14
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
+E+ RE P++ + ++ + + I KEI D++ CW
Sbjct: 233 WYELHA--REWPFKTQPAEAIIWQMGTGMK------PNLSQIGMGKEISDILLFCWAFEQ 284
Query: 62 SDRPNFREIHLFLQR 76
+RP F ++ L++
Sbjct: 285 EERPTFTKLMDMLEK 299
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 64.2 bits (157), Expect = 3e-14
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWE++T RE P+ D S+ + ++ + + P + LM C +
Sbjct: 201 LWELVT--REVPFADLSNMEIGMKVAL------EGLRPTIPPGISPHVSKLMKICMNEDP 252
Query: 62 SDRPNFREIHLFLQR 76
+ RP F I L++
Sbjct: 253 AKRPKFDMIVPILEK 267
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 64.3 bits (157), Expect = 4e-14
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
LWE+ T +QP+ + + +VV + K L P N ++ ++ CW
Sbjct: 229 LWELAT--LQQPWGNLNPAQVVAAVGF------KCKRLEIPRNLNPQVAAIIEGCWTNEP 280
Query: 62 SDRPNFREIHLFLQR 76
RP+F I L+
Sbjct: 281 WKRPSFATIMDLLRP 295
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 63.5 bits (155), Expect = 8e-14
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L+E++T + PY + +++ + I R + + NCPK + LM EC +K
Sbjct: 215 LYELMT--GQLPYSNINNRDQI--IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKR 270
Query: 62 SDRPNFREIHLFLQR 76
+RP+F I ++
Sbjct: 271 DERPSFPRILAEIEE 285
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 63.1 bits (154), Expect = 1e-13
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L+ ILT E P++++S I + + + P +CP + +++ CW
Sbjct: 218 LYTILT--GEGPFDEYSYG----KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271
Query: 62 SDRPNFREIHLFLQR 76
RP+F I L
Sbjct: 272 KKRPHFSYIVKELSE 286
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 62.7 bits (153), Expect = 1e-13
Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHD 61
L EI+ P ++ F P NCP F + C
Sbjct: 212 LCEIIGRVNADPDYLPRTMDFGLNVRGFLD-------RYCPPNCPPSFFPITVRCCDLDP 264
Query: 62 SDRPNFREIHLFLQ 75
RP+F ++ +L+
Sbjct: 265 EKRPSFVKLEHWLE 278
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 62.0 bits (151), Expect = 3e-13
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 2 LWEILTFAREQPYEDFSD--QRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQK 59
LWE++T R +P+++ R++ + + +R P N PK I LM CW K
Sbjct: 193 LWEVIT--RRKPFDEIGGPAFRIMWAVHNGTR-------PPLIKNLPKPIESLMTRCWSK 243
Query: 60 HDSDRPNFREIHLFLQR 76
S RP+ EI +
Sbjct: 244 DPSQRPSMEEIVKIMTH 260
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 60.0 bits (146), Expect = 1e-12
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 2 LWEILTFAREQPYEDFSD-QRVVEHISHFSRSTAKHIMLPQPI---NCPKEIFDLMCECW 57
L+E++T E PY ++ +++ + + NCPK + L+ +C
Sbjct: 227 LYELMT--GELPYSHINNRDQIIFMVGR------GYASPDLSKLYKNCPKAMKRLVADCV 278
Query: 58 QKHDSDRPNFREIHLFLQR 76
+K +RP F +I ++
Sbjct: 279 KKVKEERPLFPQILSSIEL 297
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 37.4 bits (87), Expect = 2e-04
Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 16/89 (17%)
Query: 2 LWEILT--------FAREQPYEDFSDQRVVEHISHFSRSTAKHIMLP------QPINCPK 47
LWE+ + PY D + P C +
Sbjct: 242 LWEVARRCVSGGIVEEYQLPYHDLVPSDP--SYEDMREIVCIKKLRPSFPNRWSSDECLR 299
Query: 48 EIFDLMCECWQKHDSDRPNFREIHLFLQR 76
++ LM ECW + + R + L +
Sbjct: 300 QMGKLMTECWAHNPASRLTALRVKKTLAK 328
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 35.8 bits (83), Expect = 5e-04
Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 24/93 (25%)
Query: 2 LWEILT--------FAREQPYEDF-----SDQRVVEHISHFSRSTAKHIMLPQPIN---- 44
LWE+ + P+ D S + + + + P
Sbjct: 213 LWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV------DQQRPNIPNRWFSD 266
Query: 45 -CPKEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
+ LM ECW ++ S R I L +
Sbjct: 267 PTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 33.2 bits (76), Expect = 0.005
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 12/87 (13%)
Query: 2 LWEILTFAR--------EQPYEDFSDQRVVEHISHFSRSTAKH--IMLPQPINCP--KEI 49
WEI + PY D K + + +C + +
Sbjct: 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 306
Query: 50 FDLMCECWQKHDSDRPNFREIHLFLQR 76
+M ECW + + R I L +
Sbjct: 307 AKIMRECWYANGAARLTALRIKKTLSQ 333
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 33.1 bits (76), Expect = 0.005
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 12/87 (13%)
Query: 2 LWEILTFAR--------EQPYEDFSDQRVVEHISHFSRSTAKH--IMLPQPINCP--KEI 49
WEI + PY D K + + +C + +
Sbjct: 208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267
Query: 50 FDLMCECWQKHDSDRPNFREIHLFLQR 76
+M ECW + + R I L +
Sbjct: 268 AKIMRECWYANGAARLTALRIKKTLSQ 294
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 33.2 bits (76), Expect = 0.005
Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 17/89 (19%)
Query: 2 LWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM----------LPQPINCPKE--- 48
LWE+ + R + D+ ++ + + M K
Sbjct: 228 LWELAS--RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGM 285
Query: 49 --IFDLMCECWQKHDSDRPNFREIHLFLQ 75
+ + + ECW R + + +
Sbjct: 286 AMLCETIEECWDHDAEARLSAGCVGERIT 314
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 31.0 bits (70), Expect = 0.024
Identities = 3/32 (9%), Positives = 11/32 (34%)
Query: 45 CPKEIFDLMCECWQKHDSDRPNFREIHLFLQR 76
+ + + + +CW + R + +
Sbjct: 284 AVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 29.2 bits (66), Expect = 0.10
Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 1 TLWEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKH 60
+ E+ T E PY + + + + R T+ E+ +++ C +++
Sbjct: 218 CMLEMATS--EYPYSECQNAAQI-----YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 270
Query: 61 DSDRPNFREI--HLFLQRK 77
+R + +++ H F Q +
Sbjct: 271 KDERYSIKDLLNHAFFQEE 289
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.5 bits (63), Expect = 0.21
Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 28/92 (30%)
Query: 14 YEDFSDQRVVEHISHFSRSTAKHI--MLPQPINCPK---EIFDLMCECWQKHDSDRPN-- 66
Y+ + + + +A+ + ++ ++ K + +++ W ++ S+ P+
Sbjct: 177 YQTYHV-----LVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILE--WLENPSNTPDKD 229
Query: 67 --------FREI------HLFLQRKNLGYNPE 84
I H + K LG+ P
Sbjct: 230 YLLSIPISCPLIGVIQLAHYVVTAKLLGFTPG 261
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 27.7 bits (62), Expect = 0.38
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 13 PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREI-- 70
P++ +Q IS + + P K++ D++ C ++ R + E+
Sbjct: 219 PFQQIINQ-----ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273
Query: 71 HLFLQRK 77
H ++Q +
Sbjct: 274 HPYVQIQ 280
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 27.7 bits (62), Expect = 0.39
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 13 PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREI-- 70
P++ +Q IS + + P K++ D++ C ++ R + E+
Sbjct: 238 PFQQIINQ-----ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292
Query: 71 HLFLQRK 77
H ++Q +
Sbjct: 293 HPYVQIQ 299
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 26.7 bits (59), Expect = 0.93
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 13 PYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREI-- 70
P++ +Q IS + + P K++ D++ C ++ R + E+
Sbjct: 266 PFQQIINQ-----ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320
Query: 71 HLFLQRK 77
H ++Q +
Sbjct: 321 HPYVQIQ 327
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 26.1 bits (58), Expect = 1.3
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 42 PINCPKEIFDLMCECWQKHDSDRPNFREI--HLFLQRK 77
K+ L+ + K DRPN EI L + +K
Sbjct: 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 25.8 bits (57), Expect = 1.6
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 39 LPQPINCPKEIFDLMCECWQKHDSDRPNFREI--HLFLQR 76
LP + + + +C K RP + ++ H F++R
Sbjct: 250 LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>3or1_C Sulfite reductase GAMA; dissimilatory sulfite reductase, sulfate
reduction, oxidored sulfite reduction; HET: SRM; 1.76A
{Desulfovibrio gigas} PDB: 3or2_C* 2v4j_C* 2xsj_C*
Length = 105
Score = 25.0 bits (55), Expect = 2.3
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 17/59 (28%)
Query: 3 WEILTFAREQPYEDFSDQRVVEHISHFSRSTAKHIM----------------LPQPINC 45
+I+ F ++ Y+ +V +S + K I LP+P C
Sbjct: 47 QKIIDFLQDY-YKANGIAPMVRILSKNTGFALKEIYELFPSGPGKGACKMAGLPKPTGC 104
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken
structural genomics/proteomics initiative, RSGI, unknown
function; NMR {Mus musculus} SCOP: b.41.1.3
Length = 141
Score = 24.9 bits (54), Expect = 3.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 44 NCPKEIFDLMCECWQKHDSDRPNFREIH 71
P+ + M E K++SDR F +I
Sbjct: 86 YGPRTVTPAMVEGIYKYNSDRKRFTQIP 113
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor,
voltage dependent, ION CH shaker, membrane protein,
eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB:
3lnm_B* 3lut_B* 2a79_B*
Length = 514
Score = 24.6 bits (53), Expect = 4.5
Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 24 EHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREIHLFLQRK 77
+ I ++ +S + L +P+N P +IF ++ + FRE +++ +
Sbjct: 105 DAILYYYQSGGR---LRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEE 155
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 24.3 bits (53), Expect = 5.9
Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Query: 11 EQPYEDFSDQRVVEHISHFSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFREI 70
P+ + + I+ + + P +C + E +K R + E+
Sbjct: 253 CHPWTQYFRGPLCLKIA-----SEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307
Query: 71 --HLFLQRKNLG 80
+ + +G
Sbjct: 308 RRKVGKALQEVG 319
>2aq4_A DNA repair protein REV1; polymerase, PAD, N-digit, G-loop,
transferase; HET: DNA DOC DCP; 2.32A {Saccharomyces
cerevisiae} PDB: 3bjy_A* 3osp_A*
Length = 434
Score = 23.9 bits (52), Expect = 8.6
Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 4/40 (10%)
Query: 29 FSRSTAKHIMLPQPINCPKEIFDLMCECWQKHDSDRPNFR 68
FSRS+ L P N I M ++ R
Sbjct: 387 FSRSS----RLGIPTNEFGIIATEMKSLYRTLGCPPMELR 422
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.138 0.452
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,352,364
Number of extensions: 63904
Number of successful extensions: 316
Number of sequences better than 10.0: 1
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 84
Length of query: 86
Length of database: 6,701,793
Length adjustment: 54
Effective length of query: 32
Effective length of database: 5,194,059
Effective search space: 166209888
Effective search space used: 166209888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.5 bits)