BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1056
(590 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 285/527 (54%), Positives = 367/527 (69%), Gaps = 57/527 (10%)
Query: 75 DFLENSANMDLKIEK-DLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG 133
DFL +D ++ DL+S LTKKITL PLVSSPMDTVTE+ MAIAMAL GGIG
Sbjct: 34 DFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGF--- 90
Query: 134 TREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAK 193
+ Q N + +++ KY + D V+ D+ +
Sbjct: 91 ----------------IHHNCTPEFQANEVRKVK--KYEQGFITDPVVLS----PKDRVR 128
Query: 194 NLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKV 253
++ +A HGFCG P+T+ G++G +L+GI++SRD+DFL+ + D +E++
Sbjct: 129 DVFEA---------KARHGFCGIPITDTGRMGSRLVGIISSRDIDFLKEEEH-DCFLEEI 178
Query: 254 MTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSK 313
MT +++ A AGI+L+EAN IL++SKKGKLPI+N+ EL+A+IARTDLKK+RDYP +SK
Sbjct: 179 MTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNEDDELVAIIARTDLKKNRDYPLASK 238
Query: 314 DENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQ 373
D QL+ GAAIGT E DK RL LL+QAGVDVV+LDSSQGNSI+QI MIK+IK +YP++Q
Sbjct: 239 DAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGNSIFQINMIKYIKDKYPNLQ 298
Query: 374 VIGGNVLFGYQPRATLLNFI-YQIEMIKF--------IKKEYPDMQVIGR-NGTAVYRVA 423
VIGGNV+ Q + N I ++ ++ I +E + GR TAVY+V+
Sbjct: 299 VIGGNVVTAAQAK----NLIDAGVDALRVGMGSGSICITQE---VLACGRPQATAVYKVS 351
Query: 424 EYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKY 483
EYA R GVPVIADGG+Q+VGH+ KALALGAST MMGSLLA T+EAPGEYFFSDG+RLKKY
Sbjct: 352 EYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKY 411
Query: 484 RGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHG 543
RGMGSL+AM D ++ +RYF +E DK+KVAQGVSGA+ DKGS+ +F+PYL G++H
Sbjct: 412 RGMGSLDAM---DKHLSSQNRYF-SEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHS 467
Query: 544 CQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRLF 590
CQDIGAKSL+ +RAMMYSGELKFEKRT AQ EG VH L+SYEKRLF
Sbjct: 468 CQDIGAKSLTQVRAMMYSGELKFEKRTSSAQVEGGVHSLHSYEKRLF 514
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 152/247 (61%), Gaps = 53/247 (21%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IHHNCTPE+QANEV KVKKY+ GFI DPV ++P + V + K +HGFCG P+T+ G+
Sbjct: 90 FIHHNCTPEFQANEVRKVKKYEQGFITDPVVLSPKDRVRDVFEAKARHGFCGIPITDTGR 149
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSP----------- 109
+G +L+GI++SRD+DFL+ E++ L + +T LV +P
Sbjct: 150 MGSRLVGIISSRDIDFLK---------EEEHDCFLEEIMTKREDLVVAPAGITLKEANEI 200
Query: 110 --------MDTVTESDMAIAMA----------------------LCGGIGAAIGTREADK 139
+ V E D +A+ LC GAAIGT E DK
Sbjct: 201 LQRSKKGKLPIVNEDDELVAIIARTDLKKNRDYPLASKDAKKQLLC---GAAIGTHEDDK 257
Query: 140 YRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAG 199
YRL LL+QAGVDVV+LDSSQGNSI+QI MIKYIK +YP++QVIGGNVVT QAKNLIDAG
Sbjct: 258 YRLDLLAQAGVDVVVLDSSQGNSIFQINMIKYIKDKYPNLQVIGGNVVTAAQAKNLIDAG 317
Query: 200 VDGLRVG 206
VD LRVG
Sbjct: 318 VDALRVG 324
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/520 (53%), Positives = 364/520 (70%), Gaps = 43/520 (8%)
Query: 75 DFLENSANMDLKIEK-DLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG 133
DFL +D ++ DL+S LTKKITL PLVSSPMDTVTE+ MAIAMAL GGIG
Sbjct: 34 DFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGF--- 90
Query: 134 TREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAK 193
+ Q N + +++ KY + D V+ D+ +
Sbjct: 91 ----------------IHHNCTPEFQANEVRKVK--KYEQGFITDPVVLS----PKDRVR 128
Query: 194 NLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKV 253
++ +A HGFCG P+T+ G++G +L+GI++SRD+DFL+ + D +E++
Sbjct: 129 DVFEA---------KARHGFCGIPITDTGRMGSRLVGIISSRDIDFLKEEEH-DRFLEEI 178
Query: 254 MTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSK 313
MT +++ A AGI+L+EAN IL++SKKGKLPI+N+ EL+A+IARTDLKK+RDYP +SK
Sbjct: 179 MTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNENDELVAIIARTDLKKNRDYPLASK 238
Query: 314 DENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQ 373
D QL+ GAAIGT E DK RL LL+ AGVDVV+LDSSQGNSI+QI MIK++K++YP++Q
Sbjct: 239 DAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQ 298
Query: 374 VIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVI--GR-NGTAVYRVAEYASRRG 430
VIGGNV+ Q + + + + + +V+ GR TAVY+V+EYA R G
Sbjct: 299 VIGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFG 358
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLE 490
VPVIADGG+Q+VGH+ KALALGAST MMGSLLA T+EAPGEYFFSDG+RLKKYRGMGSL+
Sbjct: 359 VPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLD 418
Query: 491 AMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAK 550
AM D ++ +RYF +E DK+KVAQGVSGA+ DKGS+ +F+PYL G++H CQDIGAK
Sbjct: 419 AM---DKHLSSQNRYF-SEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAK 474
Query: 551 SLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRLF 590
SL+ +RAMMYSGELKFEKRT AQ EG VH L+SYEKRLF
Sbjct: 475 SLTQVRAMMYSGELKFEKRTSSAQVEGGVHSLHSYEKRLF 514
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/255 (47%), Positives = 157/255 (61%), Gaps = 54/255 (21%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IHHNCTPE+QANEV KVKKY+ GFI DPV ++P + V + K +HGFCG P+T+ G+
Sbjct: 90 FIHHNCTPEFQANEVRKVKKYEQGFITDPVVLSPKDRVRDVFEAKARHGFCGIPITDTGR 149
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSP----------- 109
+G +L+GI++SRD+DFL+ + ++ L +TK+ LV +P
Sbjct: 150 MGSRLVGIISSRDIDFLKEEEH-----DRFLEEIMTKR----EDLVVAPAGITLKEANEI 200
Query: 110 --------MDTVTESDMAIAMA----------------------LCGGIGAAIGTREADK 139
+ V E+D +A+ LC GAAIGT E DK
Sbjct: 201 LQRSKKGKLPIVNENDELVAIIARTDLKKNRDYPLASKDAKKQLLC---GAAIGTHEDDK 257
Query: 140 YRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAG 199
YRL LL+ AGVDVV+LDSSQGNSI+QI MIKY+K++YP++QVIGGNVVT QAKNLIDAG
Sbjct: 258 YRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNLIDAG 317
Query: 200 VDGLRVGSHGCHGFC 214
VD LRVG GC C
Sbjct: 318 VDALRVG-MGCGSIC 331
>pdb|1JCN|A Chain A, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
pdb|1JCN|B Chain B, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
Length = 514
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 286/550 (52%), Positives = 379/550 (68%), Gaps = 62/550 (11%)
Query: 55 VTENGKLGEKLLGIVTSRDV---DFLENSANMD-LKIEKDLSSPLTKKITLAAPLVSSPM 110
V E+G ++L ++ D+ DFL +D + E DL+S LT+KITL PL+SSPM
Sbjct: 13 VPEDGLTAQQLFA--SADDLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPM 70
Query: 111 DTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIK 170
DTVTE+DMAIAMAL G G+ + + + ++ +K
Sbjct: 71 DTVTEADMAIAMALMG----------------------GIGFIHHNCTPEFQANEVRKVK 108
Query: 171 YIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLG 230
++ + V+ + + ++++A + HGF G P+TE G +G KL+G
Sbjct: 109 NFEQGFITDPVV---LSPSHTVGDVLEAKMR---------HGFSGIPITETGTMGSKLVG 156
Query: 231 IVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDK 290
IVTSRD+DFL + L + +VMT E++ A AG++L+EAN IL++SKKGKLPI+ND
Sbjct: 157 IVTSRDIDFLAEKDHTTL-LSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDC 215
Query: 291 GELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDS 350
EL+A+IARTDLKK+RDYP +SKD QL+ GAA+GTRE DK RL LL+QAGVDV++LDS
Sbjct: 216 DELVAIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDS 275
Query: 351 SQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFI-YQIEMIKF-------- 401
SQGNS+YQI M+ +IK++YP +QVIGGNV+ Q + N I ++ ++
Sbjct: 276 SQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAK----NLIDAGVDGLRVGMGCGSIC 331
Query: 402 IKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460
I +E + GR GTAVY+VAEYA R GVP+IADGG+Q+VGHV+KALALGAST MMGS
Sbjct: 332 ITQE---VMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGS 388
Query: 461 LLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVS 520
LLA T+EAPGEYFFSDGVRLKKYRGMGSL+AM + +++ RYF +E DK+K+AQGVS
Sbjct: 389 LLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKS---SSSQKRYF-SEGDKVKIAQGVS 444
Query: 521 GAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVH 580
G+I DKGS+ +F+PYL G++HGCQDIGA+SLS LR+MMYSGELKFEKRT+ AQ EG VH
Sbjct: 445 GSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSGELKFEKRTMSAQIEGGVH 504
Query: 581 GLYSYEKRLF 590
GL+SYEKRL+
Sbjct: 505 GLHSYEKRLY 514
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 159/255 (62%), Gaps = 54/255 (21%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IHHNCTPE+QANEV KVK ++ GFI DPV ++PS T+G VL+ K +HGF G P+TE G
Sbjct: 90 FIHHNCTPEFQANEVRKVKNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGT 149
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSP----------- 109
+G KL+GIVTSRD+DFL EKD ++ L++ +T LV +P
Sbjct: 150 MGSKLVGIVTSRDIDFLA---------EKDHTTLLSEVMTPRIELVVAPAGVTLKEANEI 200
Query: 110 --------MDTVTESDMAIAMA----------------------LCGGIGAAIGTREADK 139
+ V + D +A+ LC GAA+GTRE DK
Sbjct: 201 LQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLASKDSQKQLLC---GAAVGTREDDK 257
Query: 140 YRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAG 199
YRL LL+QAGVDV++LDSSQGNS+YQI M+ YIK++YP +QVIGGNVVT QAKNLIDAG
Sbjct: 258 YRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAG 317
Query: 200 VDGLRVGSHGCHGFC 214
VDGLRVG GC C
Sbjct: 318 VDGLRVG-MGCGSIC 331
>pdb|4AF0|B Chain B, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/534 (46%), Positives = 326/534 (61%), Gaps = 60/534 (11%)
Query: 75 DFLENSANMDLKI-EKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG 133
DFL +++ + L S TK I L P +SSPMDTVTE MAIA+AL GG+G
Sbjct: 64 DFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHH 123
Query: 134 TREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAK 193
A++ Q M++ +KK N TD
Sbjct: 124 NCSAEE-------------------------QAAMVRRVKKYE--------NGFITDPLC 150
Query: 194 NLIDAGV-DGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEK 252
DA V D L + + GFCG P+TE G+ KLLGIVT RDV F + + I+
Sbjct: 151 LGPDATVGDVLEIKAK--FGFCGVPITETGEPDSKLLGIVTGRDVQF----QDAETPIKS 204
Query: 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSS 312
VMT E+++ + I+LE+AN +L ++KKGKLPI++ G L++L+AR+DL K+++YP +S
Sbjct: 205 VMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYAS 262
Query: 313 K-DENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD 371
K E+ QL GAAIGTR DK+RLKLL++AG+DVV+LDSSQGNS+YQIE IK+IK+ YP
Sbjct: 263 KVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPK 322
Query: 372 MQVIGGNVLFGYQPRATLLNFI--YQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASR 428
+ VI GNV+ Q + +I M ++ +GR GTAVY VAE+ASR
Sbjct: 323 IDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASR 382
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
G+P IADGG+ ++GH+ KALALGAS MMG LLAGT+E+PGEYF+ +G R+K YRGMGS
Sbjct: 383 FGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGS 442
Query: 489 LEAMSRKDGGA------------AAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYL 536
+EAM G+ AA RYF +E D +KVAQGVSG + DKGS+ +F+PYL
Sbjct: 443 IEAMEHTQRGSASGKRSILGLDNAATARYF-SEADAVKVAQGVSGDVADKGSINKFVPYL 501
Query: 537 QCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRLF 590
GL+H QD G KS+S L + SG L+FE RT AQ EG VHGL SY KRLF
Sbjct: 502 FTGLQHSLQDAGIKSVSELHSCARSGSLRFELRTASAQLEGGVHGLNSYTKRLF 555
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 146/233 (62%), Gaps = 29/233 (12%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IIHHNC+ E QA V +VKKY++GFI DP+C+ P T+G VL++K + GFCG P+TE G+
Sbjct: 120 IIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGE 179
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDL---SSPL-----------TKKITLAAPLV 106
KLLGIVT RDV F + + + ++ SSP+ TKK L P+V
Sbjct: 180 PDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKL--PIV 237
Query: 107 SSP---MDTVTESDM----------AIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVV 153
S + V SD+ + + GAAIGTR DK RLKLL++AG+DVV
Sbjct: 238 DSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVV 297
Query: 154 ILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+LDSSQGNS+YQIE IK+IK+ YP + VI GNVVT +QA LI AG DGLR+G
Sbjct: 298 VLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIG 350
>pdb|4AF0|A Chain A, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/534 (46%), Positives = 324/534 (60%), Gaps = 60/534 (11%)
Query: 75 DFLENSANMDLKIEK-DLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG 133
DFL +++ L S TK I L P +SSPMDTVTE MAIA+AL GG+G
Sbjct: 64 DFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHH 123
Query: 134 TREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAK 193
A++ Q M++ +KK N TD
Sbjct: 124 NCSAEE-------------------------QAAMVRRVKKYE--------NGFITDPLC 150
Query: 194 NLIDAGV-DGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEK 252
DA V D L + + GFCG P+TE G+ KLLGIVT RDV F + + I+
Sbjct: 151 LGPDATVGDVLEIKAK--FGFCGVPITETGEPDSKLLGIVTGRDVQF----QDAETPIKS 204
Query: 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSS 312
VMT E+++ + I+LE+AN +L ++KKGKLPI++ G L++L+AR+DL K+++YP +S
Sbjct: 205 VMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYAS 262
Query: 313 K-DENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD 371
K E+ QL GAAIGTR DK+RLKLL++AG+DVV+LDSSQGNS+YQIE IK+IK+ YP
Sbjct: 263 KVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPK 322
Query: 372 MQVIGGNVLFGYQPRATLLNFI--YQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASR 428
+ VI GNV+ Q + +I M ++ +GR GTAVY VAE+ASR
Sbjct: 323 IDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASR 382
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
G+P IADGG+ ++GH+ KALALGAS MMG LLAGT+E+PGEYF+ +G R+K YRGMGS
Sbjct: 383 FGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGS 442
Query: 489 LEAMSRKDGGA------------AAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYL 536
+EAM G+ AA RYF +E D +KVAQGVSG + DKGS+ +F+PYL
Sbjct: 443 IEAMEHTQRGSASGKRSILGLDNAATARYF-SEADAVKVAQGVSGDVADKGSINKFVPYL 501
Query: 537 QCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRLF 590
GL+H QD KS+S L + SG L+FE RT AQ EG VHGL SY KRLF
Sbjct: 502 FTGLQHSLQDAAIKSVSELHSCARSGSLRFELRTASAQLEGGVHGLNSYTKRLF 555
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 146/233 (62%), Gaps = 29/233 (12%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IIHHNC+ E QA V +VKKY++GFI DP+C+ P T+G VL++K + GFCG P+TE G+
Sbjct: 120 IIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGE 179
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDL---SSPL-----------TKKITLAAPLV 106
KLLGIVT RDV F + + + ++ SSP+ TKK L P+V
Sbjct: 180 PDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKL--PIV 237
Query: 107 SSP---MDTVTESDM----------AIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVV 153
S + V SD+ + + GAAIGTR DK RLKLL++AG+DVV
Sbjct: 238 DSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVV 297
Query: 154 ILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+LDSSQGNS+YQIE IK+IK+ YP + VI GNVVT +QA LI AG DGLR+G
Sbjct: 298 VLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIG 350
>pdb|3TSB|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSB|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
pdb|3TSD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
Length = 511
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 251/477 (52%), Gaps = 52/477 (10%)
Query: 85 LKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKL 144
L E + + L++ + L PL+S+ MDTVTE+DMAIAMA GG+G ++
Sbjct: 50 LPREVSVKTVLSESLQLNIPLISAGMDTVTEADMAIAMARQGGLGII--------HKNMS 101
Query: 145 LSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLR 204
+ Q V + S+ I + P+ QV A++L+
Sbjct: 102 IEQQAEQVDKVKRSESGVISDPFFLT------PEHQVY--------DAEHLM-------- 139
Query: 205 VGSHGCHGFCGFPVTENGKLGE-KLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISA 263
G + G PV N L E KL+GI+T+RD+ F+++ + +KI VMT ++I+A
Sbjct: 140 ----GKYRISGVPVVNN--LDERKLVGIITNRDMRFIQDYS---IKISDVMTK-EQLITA 189
Query: 264 QAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGA 323
G +L EA IL+K K KLP++++ G L LI D++K ++P+S+KD+ +L+VGA
Sbjct: 190 PVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGA 249
Query: 324 AIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGY 383
A+G R+ L +A VD ++LD++ G+S I+ +K ++ +YP + +I GNV
Sbjct: 250 AVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAE 309
Query: 384 QPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVIADGGV 439
+A L+ + + +V+ G TAVY A A + G+PVIADGG+
Sbjct: 310 ATKA-LIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGI 368
Query: 440 QSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGA 499
+ G ++KALA GA M+GS+ AG +E+PGE G + K YRGMGS+ AM +
Sbjct: 369 KYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEK----- 423
Query: 500 AAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLR 556
+ DRYF KL V +G+ G + KG + + L GL+ G GA+ L LR
Sbjct: 424 GSKDRYFQEGNKKL-VPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLR 479
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 35/236 (14%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IIH N + E QA +V KVK+ + G I DP + P + + ++ G PV N
Sbjct: 95 IIHKNMSIEQQAEQVDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNN-- 152
Query: 61 LGE-KLLGIVTSRDVDFLENSANMDLKI------EKDLSSPLTKKITLAA---------- 103
L E KL+GI+T+RD+ F+++ + +KI E+ +++P+ ++ A
Sbjct: 153 LDERKLVGIITNRDMRFIQDYS---IKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEK 209
Query: 104 -PLVSSP-----MDTVTESDMAIAMALCGG-------IGAAIGTREADKYRLKLLSQAGV 150
PLV + + T+ + + I +GAA+G R+ L +A V
Sbjct: 210 LPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASV 269
Query: 151 DVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
D ++LD++ G+S I+ +K ++ +YP + +I GNV T + K LI+AG + ++VG
Sbjct: 270 DAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVG 325
>pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
Length = 494
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 251/480 (52%), Gaps = 61/480 (12%)
Query: 84 DLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLK 143
D+KI+ + LT++I + PLVS+ MDTVTE+ +A A+A GGIG D
Sbjct: 35 DVKID----TRLTRQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPD----- 85
Query: 144 LLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGL 203
+ V I+ ++ IY + PDM V K ID +
Sbjct: 86 ---EQARQVSIVKKTENGIIYDPITVT------PDMTV-----------KEAIDLMAE-- 123
Query: 204 RVGSHGCHGFCGFPVT-ENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIIS 262
+ G PV E G+L +G++T+RDV F N+ KI+ +MT ++I
Sbjct: 124 -------YKIGGLPVVDEEGRL----VGLLTNRDVRF---EKNLSKKIKDLMTPREKLIV 169
Query: 263 AQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVG 322
A ISLE+A IL + + KLP+++ +L+ LI D+ ++P++++DE +L+VG
Sbjct: 170 APPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHPNAARDEKGRLLVG 229
Query: 323 AAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFG 382
AA+GT R++ L +AGVDV+++D++ G+S IE ++ IK +YPD+ V+ GNV
Sbjct: 230 AAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNV--- 286
Query: 383 YQPRAT--LLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVIAD 436
P T L+ + +V+ G TAV +E A + VP+IAD
Sbjct: 287 ATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIAD 346
Query: 437 GGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKD 496
GG++ G ++KALA GA + M+GS+ AGT EAPGE G + K YRGMGSL AM +
Sbjct: 347 GGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAM--RS 404
Query: 497 GGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLR 556
G A DRY +K V +G+ G + KG+V + L GL+ G IGA+++ L+
Sbjct: 405 GSA---DRYGQEGENKF-VPEGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQ 460
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 42/239 (17%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVT-ENG 59
IIH N TP+ QA +V VKK ++G I DP+ + P T+ + + + ++ G PV E G
Sbjct: 77 IIHKNLTPDEQARQVSIVKKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEG 136
Query: 60 KLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVS------------ 107
+L+G++T+RDV F N+ KI KDL +P +K+ +A P +S
Sbjct: 137 ----RLVGLLTNRDVRF---EKNLSKKI-KDLMTP-REKLIVAPPDISLEKAKEILHQHR 187
Query: 108 -SPMDTVTESDMAIAMALCGGI-------------------GAAIGTREADKYRLKLLSQ 147
+ V++ + + + I GAA+GT R++ L +
Sbjct: 188 IEKLPLVSKDNKLVGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVK 247
Query: 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
AGVDV+++D++ G+S IE ++ IK +YPD+ V+ GNV T + + LI AG D ++VG
Sbjct: 248 AGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVG 306
>pdb|4FXS|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae Complexed With Imp And Mycophenolic Acid
Length = 496
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 238/474 (50%), Gaps = 55/474 (11%)
Query: 90 DLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAG 149
DL + LTK I L P VS+ DTVTE+ +AIA+A GGIG ++ + Q
Sbjct: 31 DLRTRLTKNIALNIPXVSASXDTVTEARLAIALAQEGGIGFI--------HKNXSIEQ-- 80
Query: 150 VDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHG 209
Q ++Q+++ + +P VT + + D V L +H
Sbjct: 81 ---------QAAQVHQVKIFEAGVVTHP---------VTVRPEQTIAD--VXEL---TH- 116
Query: 210 CHGFCGFPV-TENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGIS 268
HGF GFPV TEN +L+GI+T RDV F+ ++ + V T + + + G +
Sbjct: 117 YHGFAGFPVVTEN----NELVGIITGRDVRFV---TDLTKSVAAVXTPKERLATVKEGAT 169
Query: 269 LEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTR 328
E K++ K+ ++ND+ +L I D K+ P++ KDE +L VGAA+G
Sbjct: 170 GAEVQEKXHKARVEKILVVNDEFQLKGXITAKDFHKAESKPNACKDEQGRLRVGAAVGAA 229
Query: 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRAT 388
++ R+K L +AGVDV+++DSS G+S ++ I+ + YP +++IGGNV RA
Sbjct: 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARAL 289
Query: 389 LLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVIADGGVQSVGH 444
+ + ++ + +++ G TA+ A A+ G+PVIADGG++ G
Sbjct: 290 IEAGVSAVK-VGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGD 348
Query: 445 VMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDR 504
+ KA+A GAS +GS AGT EAPGE G K YRG GSL A S+ + DR
Sbjct: 349 ISKAIAAGASCVXVGSXFAGTEEAPGEVILYQGRSYKAYRGXGSLGAXSK-----GSSDR 403
Query: 505 YFH--NEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLR 556
YF N DKL V +G+ G I KG + + GL+ G+ ++ +LR
Sbjct: 404 YFQTDNAADKL-VPEGIEGRIAYKGHLKEIIHQQXGGLRSCXGLTGSATVEDLR 456
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 46/240 (19%)
Query: 2 IHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFP-VTENGK 60
IH N + E QA +V +VK ++ G + PV + P T+ V ++ HGF GFP VTEN
Sbjct: 72 IHKNXSIEQQAAQVHQVKIFEAGVVTHPVTVRPEQTIADVXELTHYHGFAGFPVVTEN-- 129
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAP---------------- 104
+L+GI+T RDV F+ + + K +++ T K LA
Sbjct: 130 --NELVGIITGRDVRFVTD-------LTKSVAAVXTPKERLATVKEGATGAEVQEKXHKA 180
Query: 105 ------LVSSPMD---TVTESDMAIAMALCGG---------IGAAIGTREADKYRLKLLS 146
+V+ +T D A + +GAA+G ++ R+K L
Sbjct: 181 RVEKILVVNDEFQLKGXITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALV 240
Query: 147 QAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+AGVDV+++DSS G+S ++ I+ + YP +++IGGNV T + A+ LI+AGV ++VG
Sbjct: 241 EAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 300
>pdb|3USB|A Chain A, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
pdb|3USB|B Chain B, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
Length = 511
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 243/488 (49%), Gaps = 53/488 (10%)
Query: 75 DFLENSANMD-LKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG 133
D L A D L E + + L++ + L PL+S+ DTVTE+D AIA A GG+G
Sbjct: 39 DVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGXDTVTEADXAIAXARQGGLGII-- 96
Query: 134 TREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAK 193
++ + Q V + S+ I + P+ QV A+
Sbjct: 97 ------HKNXSIEQQAEQVDKVKRSESGVISDPFFLT------PEHQVY--------DAE 136
Query: 194 NLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGE-KLLGIVTSRDVDFLENSANMDLKIEK 252
+L G + G PV N L E KL+GI+T+RD F+++ +KI
Sbjct: 137 HLX------------GKYRISGVPVVNN--LDERKLVGIITNRDXRFIQD---YSIKISD 179
Query: 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSS 312
V T ++I+A G +L EA IL+K K KLP++++ G L LI D++K ++P+S+
Sbjct: 180 VXTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSA 238
Query: 313 KDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDM 372
KD+ +L+VGAA+G R+ L +A VD ++LD++ G+S I+ +K ++ +YP +
Sbjct: 239 KDKQGRLLVGAAVGVTADAXTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSL 298
Query: 373 QVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASR 428
+I GNV +A L+ + + +V+ G TAVY A A +
Sbjct: 299 NIIAGNVATAEATKA-LIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARK 357
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
G+PVIADGG++ G +KALA GA +GS AG +E+PGE G + K YRG GS
Sbjct: 358 HGIPVIADGGIKYSGDXVKALAAGAHVVXLGSXFAGVAESPGETEIYQGRQFKVYRGXGS 417
Query: 489 LEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIG 548
+ A + + DRYF KL V +G+ G + KG + + L GL+ G G
Sbjct: 418 VGAXEK-----GSKDRYFQEGNKKL-VPEGIEGRVPYKGPLADTVHQLVGGLRAGXGYCG 471
Query: 549 AKSLSNLR 556
A+ L LR
Sbjct: 472 AQDLEFLR 479
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 35/236 (14%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IIH N + E QA +V KVK+ + G I DP + P + + ++ G PV N
Sbjct: 95 IIHKNXSIEQQAEQVDKVKRSESGVISDPFFLTPEHQVYDAEHLXGKYRISGVPVVNN-- 152
Query: 61 LGE-KLLGIVTSRDVDFLENSANMDLKI------EKDLSSPLTKKITLAA---------- 103
L E KL+GI+T+RD F++ + +KI E+ +++P+ ++ A
Sbjct: 153 LDERKLVGIITNRDXRFIQ---DYSIKISDVXTKEQLITAPVGTTLSEAEKILQKYKIEK 209
Query: 104 -PLVSSP-----MDTVTESDMAIAMALCGG-------IGAAIGTREADKYRLKLLSQAGV 150
PLV + + T+ + + I +GAA+G R+ L +A V
Sbjct: 210 LPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAXTRIDALVKASV 269
Query: 151 DVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
D ++LD++ G+S I+ +K ++ +YP + +I GNV T + K LI+AG + ++VG
Sbjct: 270 DAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVG 325
>pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
Length = 486
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 270/508 (53%), Gaps = 68/508 (13%)
Query: 59 GKLGEKLLGIV---TSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTE 115
GK EKL + T DV + + ++ K + D+S+ +T + L P++S+ MDTVTE
Sbjct: 2 GKFVEKLEKAIKGYTFDDVLLIPQATEVEPK-DVDVSTRITPNVKLNIPILSAAMDTVTE 60
Query: 116 SDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKE 175
+MA+AMA GG+G + G++ Q+E +K +K+
Sbjct: 61 WEMAVAMAREGGLGV-------------IHRNMGIE------------EQVEQVKRVKRA 95
Query: 176 YPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSR 235
++I +V+T D VD + HG G PV E+ EK++GI+T +
Sbjct: 96 E---RLIVEDVITIAP-----DETVD-FALFLMEKHGIDGLPVVED----EKVVGIITKK 142
Query: 236 DVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIA 295
D+ E ++++MT E+I+ I +EEA I+ +++ +LP+++++G+L+
Sbjct: 143 DIAAREGKL-----VKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVG 195
Query: 296 LIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNS 355
LI +DL + Y ++ +DEN +L+V AA+ D R L +AGVDV+++D++ ++
Sbjct: 196 LITMSDLVARKKYKNAVRDENGELLVAAAVSP--FDIKRAIELDKAGVDVIVVDTAHAHN 253
Query: 356 IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATL-LNFIYQIEMIKFIKKEYPDMQVIGR 414
+ I+ +K ++++ D I GN+ P+A L F ++ + +++
Sbjct: 254 LKAIKSMKEMRQKV-DADFIVGNIA---NPKAVDDLTFADAVK-VGIGPGSICTTRIVAG 308
Query: 415 NG----TAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPG 470
G TAV VA+ A G+ VIADGG++ G ++KA+A GA M+G+LLAGT EAPG
Sbjct: 309 VGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPG 368
Query: 471 EYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLK--VAQGVSGAIVDKGS 528
+ +G + K+YRGMGSL AM + GGA +RY+ K + V +GV G + +G+
Sbjct: 369 KEVIINGRKYKQYRGMGSLGAMMK--GGA---ERYYQGGYMKTRKFVPEGVEGVVPYRGT 423
Query: 529 VLRFLPYLQCGLKHGCQDIGAKSLSNLR 556
V L L GLK G +GA+++ L+
Sbjct: 424 VSEVLYQLVGGLKAGMGYVGARNIRELK 451
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 28/227 (12%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
+IH N E Q +V +VK+ + + D + IAP T+ L + ++HG G PV E+
Sbjct: 75 VIHRNMGIEEQVEQVKRVKRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-- 132
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLA-----------APLVSSP 109
EK++GI+T +D+ E +L ++ ++ P + ++ A P+V
Sbjct: 133 --EKVVGIITKKDIAAREGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDER 190
Query: 110 ---MDTVTESDMAIAMAL-------CGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQ 159
+ +T SD+ G + A D R L +AGVDV+++D++
Sbjct: 191 GKLVGLITMSDLVARKKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIVVDTAH 250
Query: 160 GNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+++ I+ +K ++++ D I GN+ +L A D ++VG
Sbjct: 251 AHNLKAIKSMKEMRQKV-DADFIVGNIANPKAVDDLTFA--DAVKVG 294
>pdb|3ZFH|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Inosine
5'-monophosphate Dehydrogenase
Length = 510
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 257/503 (51%), Gaps = 60/503 (11%)
Query: 87 IEKDLS--SPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKL 144
+ KD+S + LT+ I L PLVS+ MDTVTE+ +AIAMA GGIG
Sbjct: 45 LPKDVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIG--------------- 89
Query: 145 LSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLR 204
I+ + G E+ K K E ++ + VT + +I+ L+
Sbjct: 90 ---------IIHKNMGIEQQAAEVRKVKKHETAIVR----DPVTVTPSTKIIEL----LQ 132
Query: 205 VGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQ 264
+ +GF GFPV E G+L +GIVT RD+ N+ + + +MT +++++A+
Sbjct: 133 MARE--YGFSGFPVVEQGEL----VGIVTGRDLRVKPNAGD---TVAAIMTPKDKLVTAR 183
Query: 265 AGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAA 324
G LEE L +++ K+ ++++ L L+ D++K++ YP +SKDE +L VGAA
Sbjct: 184 EGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAA 243
Query: 325 IGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384
+GT R+ L AGVDVV++D++ G+S IE ++++K+ +PD+QVIGGN+
Sbjct: 244 VGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEA 303
Query: 385 PRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVIADGGVQ 440
+A ++ + +++ G +A+ VA GVP+IADGG++
Sbjct: 304 AKALAEAGADAVK-VGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIR 362
Query: 441 SVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAA 500
G + KA+ GA MMGS+ AGT EAPGE G K YRGMGSL AMS G +
Sbjct: 363 FSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSS- 421
Query: 501 AMDRYFHNE---MDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRA 557
DRYF + +KL V +G+ G + KG++ + L GL+ G+ + +R
Sbjct: 422 --DRYFQDASAGAEKL-VPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRT 478
Query: 558 MMYSGELKFEKRTLCAQNEGSVH 580
+ +F + T E VH
Sbjct: 479 -----QPQFVRITGAGMAESHVH 496
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 45/240 (18%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IIH N E QA EV KVKK++ +RDPV + PST + ++LQM +++GF GFPV E G+
Sbjct: 90 IIHKNMGIEQQAAEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGE 149
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMD--------- 111
L +GIVT RD+ N+ + +++ +T K L +P++
Sbjct: 150 L----VGIVTGRDLRVKPNAGDT-------VAAIMTPKDKLVTAREGTPLEEMKAKLYEN 198
Query: 112 ------------------TVTESDMAIAMALCGG-------IGAAIGTREADKYRLKLLS 146
T + + A L +GAA+GT R+ L
Sbjct: 199 RIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALV 258
Query: 147 QAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
AGVDVV++D++ G+S IE ++++K+ +PD+QVIGGN+ T + AK L +AG D ++VG
Sbjct: 259 AAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVG 318
>pdb|4AVF|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
Length = 490
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 257/503 (51%), Gaps = 60/503 (11%)
Query: 87 IEKDLS--SPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKL 144
+ KD+S + LT+ I L PLVS+ MDTVTE+ +AIAMA GGIG
Sbjct: 25 LPKDVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIG--------------- 69
Query: 145 LSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLR 204
I+ + G E+ K K E ++ + VT + +I+ L+
Sbjct: 70 ---------IIHKNMGIEQQAAEVRKVKKHETAIVR----DPVTVTPSTKIIEL----LQ 112
Query: 205 VGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQ 264
+ +GF GFPV E G+L +GIVT RD+ N+ + + +MT +++++A+
Sbjct: 113 MARE--YGFSGFPVVEQGEL----VGIVTGRDLRVKPNAGD---TVAAIMTPKDKLVTAR 163
Query: 265 AGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAA 324
G LEE L +++ K+ ++++ L L+ D++K++ YP +SKDE +L VGAA
Sbjct: 164 EGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAA 223
Query: 325 IGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384
+GT R+ L AGVDVV++D++ G+S IE ++++K+ +PD+QVIGGN+
Sbjct: 224 VGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEA 283
Query: 385 PRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVIADGGVQ 440
+A ++ + +++ G +A+ VA GVP+IADGG++
Sbjct: 284 AKALAEAGADAVK-VGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIR 342
Query: 441 SVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAA 500
G + KA+ GA MMGS+ AGT EAPGE G K YRGMGSL AMS G +
Sbjct: 343 FSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSS- 401
Query: 501 AMDRYFHNE---MDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRA 557
DRYF + +KL V +G+ G + KG++ + L GL+ G+ + +R
Sbjct: 402 --DRYFQDASAGAEKL-VPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRT 458
Query: 558 MMYSGELKFEKRTLCAQNEGSVH 580
+ +F + T E VH
Sbjct: 459 -----QPQFVRITGAGMAESHVH 476
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 126/240 (52%), Gaps = 45/240 (18%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
IIH N E QA EV KVKK++ +RDPV + PST + ++LQM +++GF GFPV E G+
Sbjct: 70 IIHKNMGIEQQAAEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGE 129
Query: 61 LGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMD--------- 111
L +GIVT RD+ N+ + +++ +T K L +P++
Sbjct: 130 L----VGIVTGRDLRVKPNAGDT-------VAAIMTPKDKLVTAREGTPLEEMKAKLYEN 178
Query: 112 ------------------TVTESDMAIAMALCGG-------IGAAIGTREADKYRLKLLS 146
T + + A L +GAA+GT R+ L
Sbjct: 179 RIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALV 238
Query: 147 QAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
AGVDVV++D++ G+S IE ++++K+ +PD+QVIGGN+ T + AK L +AG D ++VG
Sbjct: 239 AAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVG 298
>pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
From Streptococcus Pyogenes
Length = 491
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 227/483 (46%), Gaps = 61/483 (12%)
Query: 85 LKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG----TREADKY 140
L E DL + L +TL P++++ DTVT S AIA+A GG+G T +A++
Sbjct: 27 LPNEVDLKTKLADNLTLNIPIITAAXDTVTGSKXAIAIARAGGLGVIHKNXSITEQAEEV 86
Query: 141 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGV 200
R S+ GV I+D +++ + + + Y
Sbjct: 87 RKVKRSENGV---IIDPFFLTPEHKVSEAEELXQRYR----------------------- 120
Query: 201 DGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEI 260
G P+ E KL+GI+T+RD F+ ++ + I + T+ +
Sbjct: 121 ------------ISGVPIVET-LANRKLVGIITNRDXRFI---SDYNAPISEHXTS-EHL 163
Query: 261 ISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLI 320
++A G LE A IL + + KLP++++ G L LI D++K ++P ++KDE +L+
Sbjct: 164 VTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLL 223
Query: 321 VGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL 380
V AA+G R + L +AG D +++D++ G+S + I I+ +P+ +I GN+
Sbjct: 224 VAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIA 283
Query: 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVIAD 436
RA L + + + +V+ G TA+Y A A G +IAD
Sbjct: 284 TAEGARA-LYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIAD 342
Query: 437 GGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKD 496
GG++ G ++KALA G + +GS AGT EAPGE G + K YRG GS+ A +
Sbjct: 343 GGIKYSGDIVKALAAGGNAVXLGSXFAGTDEAPGETEIYQGRKYKTYRGXGSIAAXKK-- 400
Query: 497 GGAAAMDRYFH---NEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLS 553
+ DRYF NE +KL V +G+ G + KG+ + G++ G +GA +
Sbjct: 401 ---GSSDRYFQGSVNEANKL-VPEGIEGRVAYKGAASDIVFQXLGGIRSGXGYVGAGDIQ 456
Query: 554 NLR 556
L
Sbjct: 457 ELH 459
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 35/236 (14%)
Query: 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGK 60
+IH N + QA EV KVK+ ++G I DP + P + + ++ +++ G P+ E
Sbjct: 72 VIHKNXSITEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELXQRYRISGVPIVET-L 130
Query: 61 LGEKLLGIVTSRDVDFLEN-----------------SANMDLKI-EKDLSSPLTKKITLA 102
KL+GI+T+RD F+ + + DL+ E+ L +K+
Sbjct: 131 ANRKLVGIITNRDXRFISDYNAPISEHXTSEHLVTAAVGTDLETAERILHEHRIEKL--- 187
Query: 103 APLVS-----SPMDTVTESDMAIAMALCGG-------IGAAIGTREADKYRLKLLSQAGV 150
PLV S + T+ + + I + AA+G R + L +AG
Sbjct: 188 -PLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGA 246
Query: 151 DVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
D +++D++ G+S + I I+ +P+ +I GN+ T + A+ L DAGVD ++VG
Sbjct: 247 DAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVG 302
>pdb|4FEZ|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant
pdb|4FEZ|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant
Length = 388
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 18/286 (6%)
Query: 301 DLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIE 360
D K+ P++ KDE +L VGAA+G ++ R+K L +AGVDV+++DSS G+S ++
Sbjct: 101 DFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQ 160
Query: 361 MIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG---- 416
I+ + YP +++IGGNV RA + + ++ + +++ G
Sbjct: 161 RIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVK-VGIGPGSICTTRIVTGVGVPQI 219
Query: 417 TAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSD 476
TA+ A A+ G+PVIADGG++ G + KA+A GAS M+GS+ AGT EAPGE
Sbjct: 220 TAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQ 279
Query: 477 GVRLKKYRGMGSLEAMSRKDGGAAAMDRYFH--NEMDKLKVAQGVSGAIVDKGSVLRFLP 534
G K YRGMGSL AMS+ + DRYF N DKL V +G+ G I KG + +
Sbjct: 280 GRSYKAYRGMGSLGAMSK-----GSSDRYFQTDNAADKL-VPEGIEGRIAYKGHLKEIIH 333
Query: 535 YLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVH 580
GL+ G+ ++ +LR + +F + + E VH
Sbjct: 334 QQMGGLRSCMGLTGSATVEDLRT-----KAQFVRISGAGMKESHVH 374
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 49/166 (29%)
Query: 90 DLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIG-------------------- 129
DL + LTK I L P+VS+ MDTVTE+ +AIA+A GGIG
Sbjct: 34 DLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKI 93
Query: 130 -----------------------------AAIGTREADKYRLKLLSQAGVDVVILDSSQG 160
AA+G ++ R+K L +AGVDV+++DSS G
Sbjct: 94 FESGGAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHG 153
Query: 161 NSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+S ++ I+ + YP +++IGGNV T + A+ LI+AGV ++VG
Sbjct: 154 HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 199
>pdb|4FO4|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp And
Mycophenolic Acid
pdb|4FO4|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp And
Mycophenolic Acid
pdb|4HLV|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, In Complex With Nad And Imp
pdb|4HLV|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, In Complex With Nad And Imp
pdb|4IX2|A Chain A, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|B Chain B, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|C Chain C, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|D Chain D, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
Length = 366
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 143/268 (53%), Gaps = 18/268 (6%)
Query: 319 LIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGN 378
L VGAA+G ++ R+K L +AGVDV+++DSS G+S ++ I+ + YP +++IGGN
Sbjct: 97 LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN 156
Query: 379 VLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVI 434
V RA + + ++ + +++ G TA+ A A+ G+PVI
Sbjct: 157 VATAEGARALIEAGVSAVK-VGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 215
Query: 435 ADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSR 494
ADGG++ G + KA+A GAS M+GS+ AGT EAPGE G K YRGMGSL AMS+
Sbjct: 216 ADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSK 275
Query: 495 KDGGAAAMDRYFH--NEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSL 552
+ DRYF N DKL V +G+ G I KG + + GL+ G+ ++
Sbjct: 276 -----GSSDRYFQTDNAADKL-VPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATV 329
Query: 553 SNLRAMMYSGELKFEKRTLCAQNEGSVH 580
+LR + +F + + E VH
Sbjct: 330 EDLRT-----KAQFVRISGAGMKESHVH 352
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 27/144 (18%)
Query: 90 DLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIG-------------------- 129
DL + LTK I L P+VS+ MDTVTE+ +AIA+A GGIG
Sbjct: 34 DLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKI 93
Query: 130 -------AAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVI 182
AA+G ++ R+K L +AGVDV+++DSS G+S ++ I+ + YP +++I
Sbjct: 94 SGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEII 153
Query: 183 GGNVVTTDQAKNLIDAGVDGLRVG 206
GGNV T + A+ LI+AGV ++VG
Sbjct: 154 GGNVATAEGARALIEAGVSAVKVG 177
>pdb|1EEP|A Chain A, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi
Inosine 5'- Monphosphate Dehydrogenase In Complex With A
Sulfate Ion
pdb|1EEP|B Chain B, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi
Inosine 5'- Monphosphate Dehydrogenase In Complex With A
Sulfate Ion
Length = 404
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 19/294 (6%)
Query: 298 ARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIY 357
A + + D+P++ KD NN+L VGAA+ R++ L +A VD++++DS+ G+S
Sbjct: 121 AYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTR 180
Query: 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG- 416
IE+IK IK +YP++ +I GN++ + L++ + +++ G
Sbjct: 181 IIELIKKIKTKYPNLDLIAGNIV-TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGV 239
Query: 417 ---TAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYF 473
TA+ V E + + +IADGG++ G V+KA+A GA + M+G+L AGT E+P E
Sbjct: 240 PQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEI 299
Query: 474 FSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYF---HNEMDKLKVAQGVSGAIVDKGSVL 530
+G + K Y GMGS+ AM R + RYF +NE KL V +G+ G + G +
Sbjct: 300 IYNGKKFKSYVGMGSISAMKR-----GSKSRYFQLENNEPKKL-VPEGIEGMVPYSGKLK 353
Query: 531 RFLPYLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584
L L+ GL G +GA ++S+L+ KF K + + E H ++S
Sbjct: 354 DILTQLKGGLMSGMGYLGAATISDLKI-----NSKFVKISHSSLKESHPHDVFS 402
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 128 IGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVV 187
+GAA+ R++ L +A VD++++DS+ G+S IE+IK IK +YP++ +I GN+V
Sbjct: 144 VGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIV 203
Query: 188 TTDQAKNLIDAGVDGLRVG 206
T + A +LI G D L+VG
Sbjct: 204 TKEAALDLISVGADCLKVG 222
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 69 VTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGI 128
+T DV + +++ L E L + LTK I+L P +SS MDTVTES MAIA+A GGI
Sbjct: 10 LTFDDVSLIPRKSSV-LPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGI 68
Query: 129 G 129
G
Sbjct: 69 G 69
>pdb|3FFS|A Chain A, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|B Chain B, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|C Chain C, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|D Chain D, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
Length = 400
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 140/253 (55%), Gaps = 14/253 (5%)
Query: 308 YPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKK 367
Y + + D +L VGAAIG E + R KLL +AGVDV++LDS+ G+S+ I +K IK
Sbjct: 124 YSNENLDNKGRLRVGAAIGVNEIE--RAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181
Query: 368 EYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVA 423
+ ++ VI GNV+ + + N I+ + +++ G TA+ + +
Sbjct: 182 KM-NIDVIVGNVVTEEATKELIENGADGIK-VGIGPGSICTTRIVAGVGVPQITAIEKCS 239
Query: 424 EYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKY 483
AS+ G+P+IADGG++ G + KALA+GAS+ M+GS+LAGT E+PGE K Y
Sbjct: 240 SVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYY 299
Query: 484 RGMGSLEAMSRKDGGAAAMDRYFHNEMDKLK-VAQGVSGAIVDKGSVLRFLPYLQCGLKH 542
RGMGS+ AM G DRYF + + K V +G+ G + KG + + L GL+
Sbjct: 300 RGMGSVGAMKSGSG-----DRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRS 354
Query: 543 GCQDIGAKSLSNL 555
+G+ S+ L
Sbjct: 355 CMGYLGSASIEEL 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Query: 128 IGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVV 187
+GAAIG E + R KLL +AGVDV++LDS+ G+S+ I +K IK + ++ VI GNVV
Sbjct: 137 VGAAIGVNEIE--RAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVV 193
Query: 188 TTDQAKNLIDAGVDGLRVG 206
T + K LI+ G DG++VG
Sbjct: 194 TEEATKELIENGADGIKVG 212
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 69 VTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGI 128
+T D+ + N + + L E L + LTK ++L PL+SS MDTVTE MA+ MA GGI
Sbjct: 10 LTFEDILLVPNYSEV-LPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGI 68
Query: 129 G 129
G
Sbjct: 69 G 69
>pdb|1ME8|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Rvp Bound
pdb|1ME9|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Imp Bound
pdb|1MEH|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Imp And Moa Bound
Length = 503
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 198/421 (47%), Gaps = 58/421 (13%)
Query: 90 DLSSPLTK-------KITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRL 142
+LS+PL K +I L PLVS+ M +V+ MAIA+A GGI G++ +
Sbjct: 32 NLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIE---- 87
Query: 143 KLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDG 202
SQA + + +K K + V+ + V DQ D
Sbjct: 88 ---SQAAM---------------VHAVKNFKAGF----VVSDSNVKPDQT------FADV 119
Query: 203 LRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIIS 262
L + H VT++G LLG+VT RD + + + K+ +MT +++++
Sbjct: 120 LAISQRTTHNTVA--VTDDGTPHGVLLGLVTQRD--YPIDLTQTETKVSDMMTPFSKLVT 175
Query: 263 AQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVG 322
A L EAN I+ + K LPI++D L ++ R D +S+ + D + +VG
Sbjct: 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVG 235
Query: 323 AAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD-MQVIGGNVL- 380
A I TR+ + R+ L +AG DV+ +DSS G S +Q I +I+++Y D ++V GN++
Sbjct: 236 AGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVD 294
Query: 381 ---FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVA----EYASRRG-- 430
F Y A +FI +I + + + IGR TAV V +Y G
Sbjct: 295 GEGFRYLADAG-ADFI-KIGIGGGSIXITREQKGIGRGQATAVIDVVAERNKYFEETGIY 352
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLE 490
+PV +DGG+ H+ ALA+GA M+G A E+P +G +K+Y G GS
Sbjct: 353 IPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSR 412
Query: 491 A 491
A
Sbjct: 413 A 413
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 9 EYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGI 68
E QA V VK +K GF+ + P T VL + ++ VT++G LLG+
Sbjct: 87 ESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGL 146
Query: 69 VTSRD--VDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMAL-- 124
VT RD +D + + D+ +P +K +T S + + A+ +
Sbjct: 147 VTQRDYPIDLTQTETKV-----SDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID 201
Query: 125 -------------------CGG----------IGAAIGTREADKYRLKLLSQAGVDVVIL 155
C +GA I TR+ + R+ L +AG DV+ +
Sbjct: 202 DDQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVGAGINTRDF-RERVPALVEAGADVLCI 260
Query: 156 DSSQGNSIYQIEMIKYIKKEYPD-MQVIGGNVVTTDQAKNLIDAGVDGLR 204
DSS G S +Q I +I+++Y D ++V GN+V + + L DAG D ++
Sbjct: 261 DSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIK 310
>pdb|1ME7|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Rvp And Moa Bound
pdb|1MEI|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Xmp And Mycophenolic Acid
Bound
pdb|1MEW|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Xmp And Nad Bound
pdb|1AK5|A Chain A, Inosine Monophosphate Dehydrogenase (impdh) From
Tritrichomonas Foetus
Length = 503
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 196/419 (46%), Gaps = 54/419 (12%)
Query: 90 DLSSPLTK-------KITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRL 142
+LS+PL K +I L PLVS+ M +V+ MAIA+A GGI G++ +
Sbjct: 32 NLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIE---- 87
Query: 143 KLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDG 202
SQA + + +K K + V+ + V DQ D
Sbjct: 88 ---SQAAM---------------VHAVKNFKAGF----VVSDSNVKPDQT------FADV 119
Query: 203 LRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIIS 262
L + H VT++G LLG+VT RD + + + K+ +MT +++++
Sbjct: 120 LAISQRTTHNTVA--VTDDGTPHGVLLGLVTQRD--YPIDLTQTETKVSDMMTPFSKLVT 175
Query: 263 AQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVG 322
A L EAN I+ + K LPI++D L ++ R D +S+ + D + +VG
Sbjct: 176 AHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVG 235
Query: 323 AAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD-MQVIGGNVL- 380
A I TR+ + R+ L +AG DV+ +DSS G S +Q I +I+++Y D ++V GN++
Sbjct: 236 AGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVD 294
Query: 381 -FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVA----EYASRRG--VP 432
G++ A +I + + + IGR TAV V +Y G +P
Sbjct: 295 GEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIP 354
Query: 433 VIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEA 491
V +DGG+ H+ ALA+GA M+G A E+P +G +K+Y G GS A
Sbjct: 355 VCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRA 413
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 9 EYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGI 68
E QA V VK +K GF+ + P T VL + ++ VT++G LLG+
Sbjct: 87 ESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGL 146
Query: 69 VTSRD--VDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMAL-- 124
VT RD +D + + D+ +P +K +T S + + A+ +
Sbjct: 147 VTQRDYPIDLTQTETKV-----SDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID 201
Query: 125 -------------------CGG----------IGAAIGTREADKYRLKLLSQAGVDVVIL 155
C +GA I TR+ + R+ L +AG DV+ +
Sbjct: 202 DDQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVGAGINTRDF-RERVPALVEAGADVLCI 260
Query: 156 DSSQGNSIYQIEMIKYIKKEYPD-MQVIGGNVVTTDQAKNLIDAGVD 201
DSS G S +Q I +I+++Y D ++V GN+V + + L DAG D
Sbjct: 261 DSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGAD 307
>pdb|3KHJ|A Chain A, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|B Chain B, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|C Chain C, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|D Chain D, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|E Chain E, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|F Chain F, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|G Chain G, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|H Chain H, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
Length = 361
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 135/242 (55%), Gaps = 14/242 (5%)
Query: 319 LIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGN 378
L VGAAIG E + R KLL +AGVDV++LDS+ G+S+ I +K IK + ++ VI GN
Sbjct: 96 LRVGAAIGVNEIE--RAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGN 152
Query: 379 VLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNG----TAVYRVAEYASRRGVPVI 434
V+ + + N I+ + +++ G TA+ + + AS+ G+P+I
Sbjct: 153 VVTEEATKELIENGADGIK-VGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPII 211
Query: 435 ADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSR 494
ADGG++ G + KALA+GAS+ M+GS+LAGT E+PGE K YRGMGS+ AM
Sbjct: 212 ADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKS 271
Query: 495 KDGGAAAMDRYFHNEMDKLK-VAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLS 553
G DRYF + + K V +G+ G + KG + + L GL+ +G+ S+
Sbjct: 272 GSG-----DRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIE 326
Query: 554 NL 555
L
Sbjct: 327 EL 328
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 91/165 (55%), Gaps = 31/165 (18%)
Query: 69 VTSRDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGI 128
+T D+ + N + + L E L + LTK ++L PL+SS MDTVTE MA+ MA GGI
Sbjct: 13 LTFEDILLVPNYSEV-LPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGI 71
Query: 129 ---------------------------GAAIGTREADKYRLKLLSQAGVDVVILDSSQGN 161
GAAIG E + R KLL +AGVDV++LDS+ G+
Sbjct: 72 GIIHKNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIE--RAKLLVEAGVDVIVLDSAHGH 129
Query: 162 SIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
S+ I +K IK + ++ VI GNVVT + K LI+ G DG++VG
Sbjct: 130 SLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVG 173
>pdb|3R2G|A Chain A, Crystal Structure Of Inosine 5' Monophosphate
Dehydrogenase From Legionella Pneumophila
Length = 361
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 13/237 (5%)
Query: 321 VGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL 380
V ++G E + R + L AG D +D + ++ Y + +K +++ ++ GNV
Sbjct: 91 VFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVA 150
Query: 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQ 440
Y L + I ++ G + + SR ++ADGG++
Sbjct: 151 -TYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIK 209
Query: 441 SVGHVMKALALGASTAMMGSLLAGTSEAPGEYFF-SDGVRLKKYRGMGSLEAMSRKDGGA 499
+ G ++KALA GA M+G +LAG++ PGE F DG ++K+YRGM S EA
Sbjct: 210 TSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREA-------- 261
Query: 500 AAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLR 556
F +M + K A+GV+ + K + + + GL+ G GA S+S L+
Sbjct: 262 ---QEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQ 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 23/147 (15%)
Query: 86 KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGA--------------- 130
++ + S+ K+TL P++S+ MDT+TES+MA M G +GA
Sbjct: 26 RVVETTSTDRLGKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFK 85
Query: 131 --------AIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVI 182
++G E + R + L AG D +D + ++ Y + +K +++ ++
Sbjct: 86 KCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIM 145
Query: 183 GGNVVTTDQAKNLIDAGVDGLRVGSHG 209
GNV T A L G D ++ G G
Sbjct: 146 AGNVATYAGADYLASCGADIIKAGIGG 172
>pdb|2A7R|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
Length = 366
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 321 VGAAIGTREADKNRLKLLSQA--GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGN 378
+ A+ GT +D +L+ + +A V + LD + G S + +E +K ++K +P ++ GN
Sbjct: 117 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN 176
Query: 379 VLFGYQPRATLLNFIYQIEM------IKFIKKE----YPDMQVIGRNGTAVYRVAEYASR 428
V+ G +L+ I++ + +K+ YP + +AV A+ A
Sbjct: 177 VVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQL-------SAVMECADAAHG 229
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
+I+DGG G V KA GA M+G +LAG SE+ GE DG + K + GM S
Sbjct: 230 LKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSS 289
Query: 489 LEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIG 548
AM + GG A + + ++G + + KG V + + G++ C +G
Sbjct: 290 EMAMKKYAGGVA-----------EYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVG 338
Query: 549 AKSLSNL 555
A L L
Sbjct: 339 AAKLKEL 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 36/169 (21%)
Query: 72 RDVDFLENSANMDLKIEKDLSSPLT----KKITLAAPLVSSPMDTVTESDMAIAMALCG- 126
+DV + + + E DL+ + K+ P++++ MDTV +MA LC
Sbjct: 31 KDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMA--KVLCKF 88
Query: 127 ---------------------------GIGAAIGTREADKYRLKLLSQA--GVDVVILDS 157
+ A+ GT +D +L+ + +A V + LD
Sbjct: 89 SLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDV 148
Query: 158 SQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+ G S + +E +K ++K +P ++ GNVVT + + LI +G D ++VG
Sbjct: 149 ANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 197
>pdb|2BZN|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|E Chain E, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|F Chain F, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|G Chain G, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|H Chain H, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2C6Q|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|E Chain E, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|F Chain F, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|G Chain G, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|H Chain H, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 321 VGAAIGTREADKNRLKLLSQA--GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGN 378
+ A+ GT +D +L+ + +A V + LD + G S + +E +K ++K +P ++ GN
Sbjct: 109 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN 168
Query: 379 VLFGYQPRATLLNFIYQIEM------IKFIKKE----YPDMQVIGRNGTAVYRVAEYASR 428
V+ G +L+ I++ + +K+ YP + +AV A+ A
Sbjct: 169 VVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQL-------SAVMECADAAHG 221
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
+I+DGG G V KA GA M+G +LAG SE+ GE DG + K + GM S
Sbjct: 222 LKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSS 281
Query: 489 LEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIG 548
AM + GG A + + ++G + + KG V + + G++ C +G
Sbjct: 282 EMAMKKYAGGVA-----------EYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVG 330
Query: 549 AKSLSNL 555
A L L
Sbjct: 331 AAKLKEL 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 36/169 (21%)
Query: 72 RDVDFLENSANMDLKIEKDLSSPLT----KKITLAAPLVSSPMDTVTESDMAIAMALCG- 126
+DV + + + E DL+ + K+ P++++ MDTV +MA LC
Sbjct: 23 KDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMA--KVLCKF 80
Query: 127 ---------------------------GIGAAIGTREADKYRLKLLSQA--GVDVVILDS 157
+ A+ GT +D +L+ + +A V + LD
Sbjct: 81 SLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDV 140
Query: 158 SQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+ G S + +E +K ++K +P ++ GNVVT + + LI +G D ++VG
Sbjct: 141 ANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 189
>pdb|2BLE|A Chain A, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|A Chain A, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|B Chain B, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|C Chain C, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|D Chain D, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
Length = 367
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 30/247 (12%)
Query: 321 VGAAIGTREADKNRLKLLSQA--GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGN 378
V + G+ + D ++ + +A V + LD + G S + +E +K ++ ++P+ ++ GN
Sbjct: 121 VAVSSGSGQNDLEKMTSILEAVPQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGN 180
Query: 379 VLFGYQPRATLLNFIYQIEM------IKFIKKE----YPDMQVIGRNGTAVYRVAEYASR 428
V+ G +L+ I++ + + + YP + +AV A+ A
Sbjct: 181 VVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQL-------SAVIECADSAHG 233
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
+I+DGG G V KA GA M+G + +G +E GE +G +LK + GM S
Sbjct: 234 LKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGRKLKLFYGMSS 293
Query: 489 LEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIG 548
AM++ GG A + + ++G + + KG V + + GL+ C +G
Sbjct: 294 DTAMNKHAGGVA-----------EYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVG 342
Query: 549 AKSLSNL 555
A L L
Sbjct: 343 AAKLKEL 349
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 77 LENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMA------------- 123
L++ A +DL E+ + +K+ P++ + MDTV +MA M+
Sbjct: 46 LKSRAEVDL--ERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAAVMSQHSMFTAIHKHYS 103
Query: 124 -------------LCGGIGAAIGTREADKYRLKLLSQA--GVDVVILDSSQGNSIYQIEM 168
+ + G+ + D ++ + +A V + LD + G S + +E
Sbjct: 104 LDDWKLFATNHPECLQNVAVSSGSGQNDLEKMTSILEAVPQVKFICLDVANGYSEHFVEF 163
Query: 169 IKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+K ++ ++P+ ++ GNVVT + + LI +G D ++VG
Sbjct: 164 VKLVRAKFPEHTIMAGNVVTGEMVEELILSGADIIKVG 201
>pdb|1PVN|A Chain A, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|B Chain B, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|C Chain C, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|D Chain D, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
Length = 376
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 313 KDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD- 371
KD + +VGA I TR+ + R+ L +AG DV+ +DSS G S +Q I +I+++Y D
Sbjct: 99 KDSQKRYLVGAGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDK 157
Query: 372 MQVIGGNVL--FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVA----E 424
++V GN++ G++ A +I + + + IGR TAV V +
Sbjct: 158 VKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNK 217
Query: 425 YASRRGV--PVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKK 482
Y G+ PV +DGG+ H+ ALA+GA M+G A E+P +G +K+
Sbjct: 218 YFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKE 277
Query: 483 YRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGV 519
Y G GS A + + RY KL +GV
Sbjct: 278 YWGEGSSRARNWQ--------RYDLGGKQKLSFEEGV 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 40/151 (26%)
Query: 90 DLSSPLTK-------KITLAAPLVSSPMDTVTESDMAIAMALCGGI-------------- 128
+LS+PL K +I L PLVS+ M +V+ MAIA+A GGI
Sbjct: 31 NLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIESQAA 90
Query: 129 -----------------GAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKY 171
GA I TR+ + R+ L +AG DV+ +DSS G S +Q I +
Sbjct: 91 MVHAVKNFKDSQKRYLVGAGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGW 149
Query: 172 IKKEYPD-MQVIGGNVVTTDQAKNLIDAGVD 201
I+++Y D ++V GN+V + + L DAG D
Sbjct: 150 IREKYGDKVKVGAGNIVDGEGFRYLADAGAD 180
>pdb|1LRT|A Chain A, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|B Chain B, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|C Chain C, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|D Chain D, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
Length = 376
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 313 KDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD- 371
KD + +VGA I TR+ + R+ L +AG DV+ +DSS G S +Q I +I+ +Y D
Sbjct: 99 KDSQKRYLVGAGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIRDKYGDK 157
Query: 372 MQVIGGNVL--FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVA----E 424
++V GN++ G++ A +I + + + IGR TAV V +
Sbjct: 158 VKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNK 217
Query: 425 YASRRGV--PVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKK 482
Y G+ PV +DGG+ H+ ALA+GA M+G A E+P +G +K+
Sbjct: 218 YFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKE 277
Query: 483 YRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGV 519
Y G GS A + + RY KL +GV
Sbjct: 278 YWGEGSSRARNWQ--------RYDLGGKQKLSFEEGV 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 40/151 (26%)
Query: 90 DLSSPLTK-------KITLAAPLVSSPMDTVTESDMAIAMALCGGI-------------- 128
+LS+PL K +I L PLVS+ M +V+ MAIA+A GGI
Sbjct: 31 NLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIESQAA 90
Query: 129 -----------------GAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKY 171
GA I TR+ + R+ L +AG DV+ +DSS G S +Q I +
Sbjct: 91 MVHAVKNFKDSQKRYLVGAGINTRDF-RERVPALVEAGADVLCIDSSDGFSEWQKITIGW 149
Query: 172 IKKEYPD-MQVIGGNVVTTDQAKNLIDAGVD 201
I+ +Y D ++V GN+V + + L DAG D
Sbjct: 150 IRDKYGDKVKVGAGNIVDGEGFRYLADAGAD 180
>pdb|1YPF|A Chain A, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis
At 1.8 A Resolution
pdb|1YPF|B Chain B, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis
At 1.8 A Resolution
pdb|2A1Y|A Chain A, Crystal Structure Of Guac-Gmp Complex From Bacillus
Anthracis At 2.26 A Resolution
Length = 336
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 319 LIVGAAIGTREADKNRLKLLSQAGV--DVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG 376
LI ++G +E + ++ L+ + + + +D + G+S I MI+ IKK P+ VI
Sbjct: 95 LIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIA 154
Query: 377 GNV--------LFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASR 428
GNV L AT + I IK + G G + + A
Sbjct: 155 GNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGF------GTGGWQLAALRWCAKA 208
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
P+IADGG+++ G V K++ GA+ M+GSL AG E+PGE DG K+Y G S
Sbjct: 209 ASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSAS 268
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 151 DVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206
+ + +D + G+S I MI++IKK P+ VI GNV T + + L +AG D +VG
Sbjct: 122 EYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVG 177
>pdb|3KH5|A Chain A, Crystal Structure Of Protein Mj1225 From
Methanocaldococcus Jannaschii, A Putative Archaeal
Homolog Of G-Ampk.
pdb|3LFZ|A Chain A, Crystal Structure Of Protein Mj1225 From
Methanocaldococcus Jannaschii, A Putative Archaeal
Homolog Of G-Ampk
Length = 280
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 46/292 (15%)
Query: 30 VCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD-VDFLENSANMDLKIE 88
V + P+TT+ K L ++ + PV G K++GI+TS D VDF+ + +L E
Sbjct: 15 VTVYPTTTIRKALMTMNENKYRRLPVVNAG--NNKVVGIITSMDIVDFMGGGSKYNLIRE 72
Query: 89 KDLSSPLTKKITLAAPLVSSPMDTVTES---DMAIAMALCGGIGAAIGTREADKYRLKLL 145
K + L ++ + T+ E+ D AI L +G A + ++ + L+
Sbjct: 73 KHERNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQL-ISLI 131
Query: 146 SQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRV 205
++ V +LD N + YI ++ V+ + L D +R
Sbjct: 132 TERDVIRALLDKIDENEVID----DYITRD----------VIVATPGERLKDVARTMVR- 176
Query: 206 GSHGCHGFCGFPVTENGKLGEKLLGIVTSRDV------DFLEN---SANM----DLKIEK 252
+GF PV G +L+GI+TS D D+ N + N+ ++++E+
Sbjct: 177 -----NGFRRLPVVSEG----RLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEE 227
Query: 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304
+M ++I+A+ G L++ I+ + G LP++++ + +I D+ K
Sbjct: 228 IMK--RDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLK 277
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 211 HGFCGFPVTENGKLGEKLLGIVTSRD-VDFLENSANMDLKIEKVMTN----VNE------ 259
+ + PV G K++GI+TS D VDF+ + +L EK N +NE
Sbjct: 33 NKYRRLPVVNAG--NNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIM 90
Query: 260 ---IISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKS 305
+I+ + ++EA G PI+ND+ +LI+LI D+ ++
Sbjct: 91 EENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRA 139
>pdb|2QR6|A Chain A, Crystal Structure Of Imp DehydrogenaseGMP REDUCTASE-Like
Protein (Np_599840.1) From Corynebacterium Glutamicum
Atcc 13032 Kitasato At 1.50 A Resolution
Length = 393
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGS 488
R V +IADG +++ G V+KA+A GA ++GS LA EA G+ +F V G
Sbjct: 276 RYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGV 335
Query: 489 LEAMSRKDGGAAAMDRYFH 507
+ D A ++++ H
Sbjct: 336 VTESVDLDEAAPSLEQILH 354
>pdb|3KPC|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine
Length = 124
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 261 ISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKS 305
I+A + IS+ EA IL K LPI+++ G+L+ +I D+ K+
Sbjct: 14 ITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA 58
>pdb|3KPB|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPB|C Chain C, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPB|B Chain B, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPB|D Chain D, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPD|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPD|B Chain B, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPD|C Chain C, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine.
pdb|3KPD|D Chain D, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
Methionine
Length = 122
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 261 ISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKS 305
I+A + IS+ EA IL K LPI+++ G+L+ +I D+ K+
Sbjct: 12 ITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA 56
>pdb|1AL7|A Chain A, Three-Dimensional Structures Of Glycolate Oxidase With
Bound Active- Site Inhibitors
pdb|1AL8|A Chain A, Three-Dimensional Structure Of Glycolate Oxidase With
Bound Active- Site Inhibitors
Length = 359
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 426 ASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471
A++ +PV DGGV+ V KALALGA+ +G + + A GE
Sbjct: 275 AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 320
>pdb|1GOX|A Chain A, Refined Structure Of Spinach Glycolate Oxidase At 2
Angstroms Resolution
Length = 370
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471
+PV DGGV+ V KALALGA+ +G + + A GE
Sbjct: 281 IPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 321
>pdb|1GYL|A Chain A, Involvement Of Tyr24 And Trp108 In Substrate Binding And
Substrate Specificity Of Glycolate Oxidase
pdb|1GYL|B Chain B, Involvement Of Tyr24 And Trp108 In Substrate Binding And
Substrate Specificity Of Glycolate Oxidase
Length = 369
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471
+PV DGGV+ V KALALGA+ +G + + A GE
Sbjct: 280 IPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 320
>pdb|2GJL|A Chain A, Crystal Structure Of 2-Nitropropane Dioxygenase
pdb|2GJN|A Chain A, Crystal Structure Of 2-Nitropropane Dioxygenase Complexed
With Fmn And Substrate
Length = 328
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 426 ASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAP 469
A+R VP+IA GG ++ ALALGA MG+ T E P
Sbjct: 168 ANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECP 211
>pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
Length = 135
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 226 EKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQ-AGISLEEAN----VILEKSK 280
EKL+GI+T R DF S +D ++ T V EI++ Q A + L N ++ + +
Sbjct: 49 EKLVGILTER--DFSRKSYLLDKPVKD--TQVKEIMTRQVAYVDLNNTNEDCMALITEMR 104
Query: 281 KGKLPILNDKGELIALIARTDLKKS 305
LP+L+D G++I L++ DL K
Sbjct: 105 VRHLPVLDD-GKVIGLLSIGDLVKD 128
>pdb|3PTW|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein
Transacylase From Clostridium Perfringens Atcc 13124
Length = 336
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 438 GVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDG 497
GV+S H+ L+LG +A++ S G F DGV+L K RG EA++ G
Sbjct: 81 GVKS--HISCGLSLGEYSALIHS---------GAINFEDGVKLVKKRGKFMQEAVAEGIG 129
Query: 498 GAAAMDRYFHNEMDKL 513
G A+ R ++D++
Sbjct: 130 GMVAVLRMTPEQVDEI 145
>pdb|2DU2|A Chain A, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2DU2|B Chain B, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2DU2|C Chain C, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2DU2|D Chain D, Crystal Structure Analysis Of The L-Lactate Oxidase
pdb|2E77|A Chain A, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2E77|B Chain B, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2E77|C Chain C, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2E77|D Chain D, Crystal Structure Of L-Lactate Oxidase With Pyruvate
Complex
pdb|2ZFA|A Chain A, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus
Viridans
pdb|2ZFA|B Chain B, Structure Of Lactate Oxidase At Ph4.5 From Aerococcus
Viridans
Length = 374
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 422 VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459
+AE ++R VP++ D GV+ HV KALA GA +G
Sbjct: 283 IAERVNKR-VPIVFDSGVRRGEHVAKALASGADVVALG 319
>pdb|2J6X|A Chain A, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|B Chain B, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|C Chain C, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|D Chain D, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|E Chain E, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|F Chain F, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|G Chain G, The Crystal Structure Of Lactate Oxidase
pdb|2J6X|H Chain H, The Crystal Structure Of Lactate Oxidase
Length = 374
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 422 VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459
+AE ++R VP++ D GV+ HV KALA GA +G
Sbjct: 283 IAERVNKR-VPIVFDSGVRRGEHVAKALASGADVVALG 319
>pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 (loop
Deletion) From Arabidopsis Thaliana
Length = 152
Score = 32.3 bits (72), Expect = 0.67, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 215 GFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLK----IEKVMTNVN----------EI 260
GFPV + KL+G+V+ D+ L+ S + K ++K+++ N
Sbjct: 40 GFPVIDED---WKLVGLVSDYDLLALD-SGDSTWKTFNAVQKLLSKTNGKLVGDLMTPAP 95
Query: 261 ISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDEN 316
+ + +LE+A IL ++K +LP+++ G+L+ +I R ++ ++ S D N
Sbjct: 96 LVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRN 151
>pdb|2NLI|A Chain A, Crystal Structure Of The Complex Between L-Lactate Oxidase
And A Substrate Analogue At 1.59 Angstrom Resolution
pdb|2NLI|B Chain B, Crystal Structure Of The Complex Between L-Lactate Oxidase
And A Substrate Analogue At 1.59 Angstrom Resolution
Length = 368
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 422 VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459
+AE ++R VP++ D GV+ HV KALA GA +G
Sbjct: 277 IAERVNKR-VPIVFDSGVRRGEHVAKALASGADVVALG 313
>pdb|1HUV|A Chain A, Crystal Structure Of A Soluble Mutant Of The
Membrane-Associated (S)- Mandelate Dehydrogenase From
Pseudomonas Putida At 2.15a Resolution
pdb|1P4C|A Chain A, High Resolution Structure Of Oxidized Active Mutant Of
(S)- Mandelate Dehydrogenase
pdb|1P5B|A Chain A, High Resolution Structure Of Reduced Active Mutant Of
(S)-Mandelate Dehydrogenase
Length = 380
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 422 VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459
+A+ ++ G PV+ D G + ++KALALGA ++G
Sbjct: 270 LAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLG 307
>pdb|2A7N|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
Of (S)- Mandelate Dehydrogenase
pdb|2A7P|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
Of (S)- Mandelate Dehydrogenase In Complex With Its
Substrate 3-Indolelactate
pdb|2A85|A Chain A, Crystal Structure Of The G81a Mutant Of The Active Chimera
Of (S)- Mandelate Dehydrogenase In Complex With Its
Substrate 2- Hydroxyoctanoate
pdb|3GIY|A Chain A, Crystal Structures Of The G81a Mutant Of The Active
Chimera Of (S)-Mandelate Dehydrogenase And Its Complex
With Two Of Its Substrates
Length = 380
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 422 VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459
+A+ ++ G PV+ D G + ++KALALGA ++G
Sbjct: 270 LAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLG 307
>pdb|2CDH|0 Chain 0, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|1 Chain 1, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|2 Chain 2, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|3 Chain 3, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|Y Chain Y, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|Z Chain Z, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 226
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 426 ASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471
A++ +PV DGGV+ V KALALGA+ +G + + A GE
Sbjct: 159 AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 204
>pdb|2W0U|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate.
pdb|2W0U|B Chain B, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate.
pdb|2W0U|C Chain C, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate.
pdb|2W0U|D Chain D, Crystal Structure Of Human Glycolate Oxidase In Complex
With The Inhibitor 5-[(4-Chlorophenyl)sulfanyl]-
1,2,3-Thiadiazole-4-Carboxylate
Length = 370
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 167 EMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVT 219
E IK++++ + ++ ++ D A+ + G++G+ V +HG G P T
Sbjct: 220 EDIKWLRR-LTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPAT 271
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMG 459
V V DGGV+ V+KALALGA +G
Sbjct: 286 VEVFLDGGVRKGTDVLKALALGAKAVFVG 314
>pdb|2NZL|A Chain A, Crystal Structure Of Human Hydroxyacid Oxidase 1
Length = 392
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 167 EMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVT 219
E IK++++ + ++ ++ D A+ + G++G+ V +HG G P T
Sbjct: 242 EDIKWLRR-LTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPAT 293
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMG 459
V V DGGV+ V+KALALGA +G
Sbjct: 308 VEVFLDGGVRKGTDVLKALALGAKAVFVG 336
>pdb|2RDT|A Chain A, Crystal Structure Of Human Glycolate Oxidase (Go) In
Complex With Cdst
pdb|2RDU|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
With Glyoxylate
pdb|2RDW|A Chain A, Crystal Structure Of Human Glycolate Oxidase In Complex
With Sulfate
Length = 387
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 167 EMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVT 219
E IK++++ + ++ ++ D A+ + G++G+ V +HG G P T
Sbjct: 237 EDIKWLRR-LTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPAT 288
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMG 459
V V DGGV+ V+KALALGA +G
Sbjct: 303 VEVFLDGGVRKGTDVLKALALGAKAVFVG 331
>pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 From
Arabidopsis Thaliana
Length = 166
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 268 SLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDEN 316
+LE+A IL ++K +LP+++ G+L+ +I R ++ ++ S D N
Sbjct: 117 NLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRN 165
>pdb|2O16|A Chain A, Crystal Structure Of A Putative Acetoin Utilization
Protein (Acub) From Vibrio Cholerae
pdb|2O16|B Chain B, Crystal Structure Of A Putative Acetoin Utilization
Protein (Acub) From Vibrio Cholerae
Length = 160
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 217 PVTENGKLGEKLLGIVTSRDV-----DFLENSANMD-LKIE----KVMTNVNEIISAQAG 266
P+ + K KLLGIV+ RD+ L+ SA D L E +VM ++ QAG
Sbjct: 40 PIVDANK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVMHTDVTSVAPQAG 96
Query: 267 ISLEEANVILEKSKKGKLPILNDKGELIALIARTDL 302
L+E+ + ++K K G LP++ K L+ +I +D
Sbjct: 97 --LKESAIYMQKHKIGCLPVVA-KDVLVGIITDSDF 129
>pdb|2V5J|A Chain A, Apo Class Ii Aldolase Hpch
pdb|2V5J|B Chain B, Apo Class Ii Aldolase Hpch
pdb|2V5K|A Chain A, Class Ii Aldolase Hpch - Magnesium - Oxamate Complex
pdb|2V5K|B Chain B, Class Ii Aldolase Hpch - Magnesium - Oxamate Complex
Length = 287
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 309 PDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVIL 348
PD + N+Q+ V I TREA KN ++L GVD V +
Sbjct: 157 PDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFI 196
>pdb|1TB3|A Chain A, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|B Chain B, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|C Chain C, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|D Chain D, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|E Chain E, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|F Chain F, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|G Chain G, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
pdb|1TB3|H Chain H, Crystal Structure Analysis Of Recombinant Rat Kidney Long-
Chain Hydroxy Acid Oxidase
Length = 352
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVR 479
+ V DGGV++ V+KALALGA +G + GE DGV+
Sbjct: 273 IEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGE----DGVK 317
>pdb|3SGZ|A Chain A, High Resolution Crystal Structure Of Rat Long Chain
Hydroxy Acid Oxidase In Complex With The Inhibitor
4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
3-Thiadiazole.
pdb|3SGZ|B Chain B, High Resolution Crystal Structure Of Rat Long Chain
Hydroxy Acid Oxidase In Complex With The Inhibitor
4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
3-Thiadiazole.
pdb|3SGZ|C Chain C, High Resolution Crystal Structure Of Rat Long Chain
Hydroxy Acid Oxidase In Complex With The Inhibitor
4-Carboxy-5-[(4-Chiorophenyl) Sulfanyl]-1, 2,
3-Thiadiazole
Length = 352
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 431 VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVR 479
+ V DGGV++ V+KALALGA +G + GE DGV+
Sbjct: 273 IEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGE----DGVK 317
>pdb|4B5X|A Chain A, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase (Hpai), Mutant D42a
pdb|4B5X|B Chain B, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase (Hpai), Mutant D42a
Length = 262
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 309 PDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVIL 348
PD + N+Q+ V I TREA KN ++L GVD V +
Sbjct: 132 PDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFI 171
>pdb|4B5V|A Chain A, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With
4-hydroxyl-2-ketoheptane-1,7-dioate
Length = 251
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 309 PDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVIL 348
PD + N+Q+ V I TREA KN ++L GVD V +
Sbjct: 132 PDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFI 171
>pdb|4B5S|A Chain A, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With Pyruvate
pdb|4B5S|B Chain B, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With Pyruvate
pdb|4B5T|A Chain A, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With Ketobutyrate
pdb|4B5T|B Chain B, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With Ketobutyrate
pdb|4B5U|A Chain A, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With Pyruvate And Succinic
Semialdehyde
pdb|4B5U|B Chain B, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With Pyruvate And Succinic
Semialdehyde
pdb|4B5V|B Chain B, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase, Hpai, In Complex With
4-hydroxyl-2-ketoheptane-1,7-dioate
Length = 251
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 309 PDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVIL 348
PD + N+Q+ V I TREA KN ++L GVD V +
Sbjct: 132 PDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFI 171
>pdb|3IGY|B Chain B, Crystal Structures Of Leishmania Mexicana Phosphoglycerate
Mutase At High Cobalt Concentrations
pdb|3IGZ|B Chain B, Crystal Structures Of Leishmania Mexicana Phosphoglycerate
Mutase At Low Cobalt Concentration
Length = 561
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 74/199 (37%), Gaps = 27/199 (13%)
Query: 407 PDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGAS-TAMMGSLLAGT 465
P M R+ V + + G+P AD G VGH ALGA A+ G+ L
Sbjct: 42 PFMDAHRRDNRHFRCVRAHGTAVGLPTDADMGNSEVGHN----ALGAGRVALQGASLVDD 97
Query: 466 SEAPGEYFFSDGVRLKKYRGMGSLEAMS------RKDGGAAAMDRYFHNEMD-------- 511
+ GE + +G R G S E + DGG + D ++ ++
Sbjct: 98 AIKSGEIYTGEGYRY--LHGAFSKEGSTLHLIGLLSDGGVHSRDNQIYSIIEHAVKDGAK 155
Query: 512 KLKVAQGVSGAIVDKGSVLRFLPYLQCGL----KHGCQDIGAKSLSNLRAMM--YSGELK 565
+++V G V GS RF L+ L ++GC A + M Y +
Sbjct: 156 RIRVHALYDGRDVPDGSSFRFTDELEAVLAKVRQNGCDAAIASGGGRMFVTMDRYDADWS 215
Query: 566 FEKRTLCAQNEGSVHGLYS 584
+R AQ G +S
Sbjct: 216 IVERGWRAQVLGDARHFHS 234
>pdb|4B5W|A Chain A, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase R70a Mutant, Hpai, In Complex With Pyruvate
pdb|4B5W|B Chain B, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase R70a Mutant, Hpai, In Complex With Pyruvate
pdb|4B5W|C Chain C, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase R70a Mutant, Hpai, In Complex With Pyruvate
pdb|4B5W|D Chain D, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase R70a Mutant, Hpai, In Complex With Pyruvate
pdb|4B5W|E Chain E, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase R70a Mutant, Hpai, In Complex With Pyruvate
pdb|4B5W|F Chain F, Crystal Structures Of Divalent Metal Dependent Pyruvate
Aldolase R70a Mutant, Hpai, In Complex With Pyruvate
Length = 256
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 309 PDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVIL 348
PD + N+Q+ V I TREA KN ++L GVD V +
Sbjct: 132 PDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFI 171
>pdb|2NX2|A Chain A, Crystal Structure Of Protein Ypsa From Bacillus Subtilis,
Pfam Duf1273
Length = 181
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 328 READKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQV 374
++A KNRL G++ +++ G ++ E +++EYPD++V
Sbjct: 29 KKAIKNRLIAFLDEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKV 75
>pdb|4ESY|A Chain A, Crystal Structure Of The Cbs Domain Of Cbs Domain
Containing Membrane Protein From Sphaerobacter
Thermophilus
Length = 170
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 30 VCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73
V AP ++G + ++HG PV ++G +GIVT RD
Sbjct: 116 VTAAPEDSVGSIADQXRRHGIHRIPVVQDG----VPVGIVTRRD 155
>pdb|4ESY|B Chain B, Crystal Structure Of The Cbs Domain Of Cbs Domain
Containing Membrane Protein From Sphaerobacter
Thermophilus
Length = 170
Score = 29.3 bits (64), Expect = 5.7, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 30 VCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73
V AP ++G + ++HG PV ++G +GIVT RD
Sbjct: 116 VTAAPEDSVGSIADQXRRHGIHRIPVVQDG----VPVGIVTRRD 155
>pdb|3LV9|A Chain A, Crystal Structure Of Cbs Domain Of A Putative
Transporter From Clostridium Difficile 630
Length = 148
Score = 29.3 bits (64), Expect = 6.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 28 DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74
D VCI S + K+L + K+ G +PV K + +LG V RD+
Sbjct: 34 DXVCIYESDSEEKILAILKEEGVTRYPVCRKNK--DDILGFVHIRDL 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,047,273
Number of Sequences: 62578
Number of extensions: 712803
Number of successful extensions: 2589
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2343
Number of HSP's gapped (non-prelim): 175
length of query: 590
length of database: 14,973,337
effective HSP length: 104
effective length of query: 486
effective length of database: 8,465,225
effective search space: 4114099350
effective search space used: 4114099350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)