Query psy1056
Match_columns 590
No_of_seqs 537 out of 4309
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 21:31:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4af0_A Inosine-5'-monophosphat 100.0 6E-101 2E-105 813.0 34.1 477 67-590 58-555 (556)
2 4fxs_A Inosine-5'-monophosphat 100.0 7.7E-81 2.6E-85 679.1 34.4 457 69-584 11-479 (496)
3 4avf_A Inosine-5'-monophosphat 100.0 2.2E-79 7.6E-84 667.2 30.5 458 69-584 10-480 (490)
4 3usb_A Inosine-5'-monophosphat 100.0 4.7E-77 1.6E-81 651.5 36.5 458 69-584 35-502 (511)
5 1me8_A Inosine-5'-monophosphat 100.0 3E-73 1E-77 622.4 30.4 458 69-588 10-497 (503)
6 1jcn_A Inosine monophosphate d 100.0 3.7E-69 1.3E-73 593.4 30.8 476 68-590 29-514 (514)
7 2cu0_A Inosine-5'-monophosphat 100.0 2.7E-66 9.2E-71 566.3 29.0 452 69-589 15-479 (486)
8 1vrd_A Inosine-5'-monophosphat 100.0 1.8E-65 6.3E-70 561.9 28.6 462 69-589 17-488 (494)
9 1zfj_A Inosine monophosphate d 100.0 1.1E-62 3.7E-67 540.0 38.8 461 69-589 12-487 (491)
10 3ffs_A Inosine-5-monophosphate 100.0 1.4E-60 4.7E-65 500.9 29.4 376 66-584 7-391 (400)
11 4fo4_A Inosine 5'-monophosphat 100.0 4.5E-58 1.5E-62 478.3 28.5 334 69-584 14-356 (366)
12 3khj_A Inosine-5-monophosphate 100.0 3.1E-55 1E-59 458.0 29.0 332 68-584 12-352 (361)
13 3r2g_A Inosine 5'-monophosphat 100.0 1.8E-52 6.3E-57 433.1 25.1 237 325-585 95-339 (361)
14 1eep_A Inosine 5'-monophosphat 100.0 4.7E-43 1.6E-47 374.3 29.1 385 69-586 10-404 (404)
15 2c6q_A GMP reductase 2; TIM ba 100.0 8.1E-42 2.8E-46 356.0 30.0 223 331-572 119-349 (351)
16 1ypf_A GMP reductase; GUAC, pu 100.0 5.4E-34 1.9E-38 296.5 22.7 224 329-579 105-335 (336)
17 2qr6_A IMP dehydrogenase/GMP r 99.9 2.9E-24 1E-28 228.3 25.3 192 332-558 168-388 (393)
18 4af0_A Inosine-5'-monophosphat 99.9 9.1E-24 3.1E-28 224.2 9.4 193 1-207 120-351 (556)
19 3kh5_A Protein MJ1225; AMPK, A 99.9 5.5E-22 1.9E-26 200.0 15.3 244 23-306 8-279 (280)
20 2yzq_A Putative uncharacterize 99.9 1.8E-21 6.3E-26 196.7 16.7 237 17-308 2-279 (282)
21 3ddj_A CBS domain-containing p 99.9 1.4E-21 4.9E-26 199.2 13.9 238 17-357 21-272 (296)
22 3sr7_A Isopentenyl-diphosphate 99.8 6.2E-21 2.1E-25 198.3 8.7 181 320-558 146-351 (365)
23 3ddj_A CBS domain-containing p 99.8 1.4E-20 4.7E-25 191.9 9.7 179 21-307 95-284 (296)
24 3usb_A Inosine-5'-monophosphat 99.8 1.2E-18 4.1E-23 190.2 21.5 270 1-398 95-387 (511)
25 3t4n_C Nuclear protein SNF4; C 99.8 2.1E-19 7.3E-24 185.4 12.8 191 17-306 112-318 (323)
26 2v8q_E 5'-AMP-activated protei 99.8 9.3E-19 3.2E-23 181.2 17.7 253 20-308 36-323 (330)
27 3vkj_A Isopentenyl-diphosphate 99.8 1.3E-18 4.4E-23 181.6 14.0 162 338-558 146-339 (368)
28 2qrd_G Protein C1556.08C; AMPK 99.8 9E-19 3.1E-23 181.6 11.6 256 20-308 23-315 (334)
29 4fxs_A Inosine-5'-monophosphat 99.8 6.1E-18 2.1E-22 184.0 17.5 270 1-398 71-362 (496)
30 2nli_A Lactate oxidase; flavoe 99.8 4.6E-18 1.6E-22 178.0 14.2 140 358-558 217-357 (368)
31 3t4n_C Nuclear protein SNF4; C 99.7 2.2E-18 7.5E-23 177.8 11.0 246 23-358 34-308 (323)
32 3sgz_A Hydroxyacid oxidase 2; 99.7 8.3E-18 2.8E-22 173.2 12.7 138 360-558 207-345 (352)
33 4avf_A Inosine-5'-monophosphat 99.7 2.7E-17 9.3E-22 178.7 14.3 271 1-398 70-360 (490)
34 4esy_A CBS domain containing m 99.7 4.3E-17 1.5E-21 152.4 11.7 118 176-308 18-162 (170)
35 1me8_A Inosine-5'-monophosphat 99.7 3E-17 1E-21 179.3 11.5 276 1-398 79-380 (503)
36 1p4c_A L(+)-mandelate dehydrog 99.7 1.6E-17 5.3E-22 175.0 8.8 156 359-586 214-370 (380)
37 2nzl_A Hydroxyacid oxidase 1; 99.7 1.8E-17 6.3E-22 174.6 8.7 140 358-558 240-380 (392)
38 1kbi_A Cytochrome B2, L-LCR; f 99.7 8.9E-17 3E-21 174.8 12.1 140 359-558 332-476 (511)
39 3l2b_A Probable manganase-depe 99.7 4.3E-16 1.5E-20 154.4 14.3 78 228-307 165-243 (245)
40 1gox_A (S)-2-hydroxy-acid oxid 99.7 3.7E-16 1.3E-20 164.1 12.8 139 359-558 214-353 (370)
41 1vrd_A Inosine-5'-monophosphat 99.6 5.1E-16 1.7E-20 169.8 13.6 273 1-398 77-368 (494)
42 1vcf_A Isopentenyl-diphosphate 99.6 5.9E-16 2E-20 160.5 12.8 158 341-558 144-328 (332)
43 1p0k_A Isopentenyl-diphosphate 99.6 1.1E-15 3.8E-20 159.7 14.8 165 336-558 134-324 (349)
44 1vr9_A CBS domain protein/ACT 99.6 2.8E-16 9.6E-21 152.6 8.2 158 179-355 16-176 (213)
45 1jcn_A Inosine monophosphate d 99.6 4.6E-16 1.6E-20 170.8 10.6 270 1-398 90-386 (514)
46 3nqr_A Magnesium and cobalt ef 99.6 1.4E-15 4.9E-20 134.7 9.2 112 180-306 7-124 (127)
47 3lfr_A Putative metal ION tran 99.6 2.3E-15 7.9E-20 135.2 9.7 114 180-308 7-127 (136)
48 3lhh_A CBS domain protein; str 99.6 2E-15 6.7E-20 141.4 9.3 117 176-308 42-164 (172)
49 3i8n_A Uncharacterized protein 99.6 1.1E-15 3.7E-20 136.1 7.2 116 176-306 6-127 (130)
50 3lv9_A Putative transporter; C 99.6 1.3E-15 4.3E-20 138.8 7.4 115 176-306 23-143 (148)
51 3k6e_A CBS domain protein; str 99.6 2.1E-15 7.1E-20 139.1 8.5 112 180-307 19-141 (156)
52 1vr9_A CBS domain protein/ACT 99.6 5.1E-15 1.8E-19 143.7 10.1 201 16-354 10-213 (213)
53 3jtf_A Magnesium and cobalt ef 99.6 5.5E-15 1.9E-19 131.4 9.3 111 179-306 8-124 (129)
54 3oi8_A Uncharacterized protein 99.6 1.1E-14 3.6E-19 134.1 11.5 113 176-304 38-156 (156)
55 1ea0_A Glutamate synthase [NAD 99.6 2.4E-15 8.1E-20 176.5 8.0 164 356-558 978-1164(1479)
56 3gby_A Uncharacterized protein 99.6 2.5E-15 8.7E-20 133.2 6.4 116 177-307 6-125 (128)
57 2rih_A Conserved protein with 99.6 6.7E-15 2.3E-19 132.7 9.0 115 178-307 7-127 (141)
58 3hf7_A Uncharacterized CBS-dom 99.6 4.3E-15 1.5E-19 132.4 7.1 113 180-306 6-125 (130)
59 1zfj_A Inosine monophosphate d 99.5 2.9E-13 9.8E-18 147.9 22.2 273 1-398 72-364 (491)
60 2p9m_A Hypothetical protein MJ 99.5 6.7E-15 2.3E-19 131.9 7.2 117 176-306 8-134 (138)
61 2cu0_A Inosine-5'-monophosphat 99.5 1.4E-14 4.9E-19 157.7 11.2 265 1-398 75-356 (486)
62 3kpb_A Uncharacterized protein 99.5 6E-15 2.1E-19 129.2 6.6 112 180-307 5-119 (122)
63 3oco_A Hemolysin-like protein 99.5 6.5E-15 2.2E-19 134.9 6.9 118 176-308 20-143 (153)
64 3fv6_A YQZB protein; CBS domai 99.5 7.9E-15 2.7E-19 135.3 7.6 120 176-307 17-143 (159)
65 3k2v_A Putative D-arabinose 5- 99.5 1.2E-14 4.1E-19 132.5 8.6 114 177-305 29-149 (149)
66 4esy_A CBS domain containing m 99.5 1.3E-14 4.3E-19 135.5 8.6 133 23-238 22-157 (170)
67 1ofd_A Ferredoxin-dependent gl 99.5 5E-15 1.7E-19 174.1 6.9 163 357-558 1014-1199(1520)
68 3kxr_A Magnesium transporter, 99.5 2.8E-14 9.4E-19 137.7 11.0 126 163-307 39-173 (205)
69 4gqw_A CBS domain-containing p 99.5 1.1E-14 3.9E-19 132.3 7.8 119 176-308 5-143 (152)
70 2ef7_A Hypothetical protein ST 99.5 1.2E-14 4E-19 129.5 7.6 116 177-307 5-124 (133)
71 3lqn_A CBS domain protein; csg 99.5 2.4E-14 8.1E-19 130.4 7.9 116 176-307 15-142 (150)
72 2yzi_A Hypothetical protein PH 99.5 2.6E-14 8.8E-19 128.1 7.8 117 177-308 8-129 (138)
73 1y5h_A Hypothetical protein RV 99.5 2.1E-14 7.3E-19 127.8 6.9 114 179-307 11-130 (133)
74 1pbj_A Hypothetical protein; s 99.5 2.6E-14 9E-19 125.6 7.4 112 180-307 5-121 (125)
75 3ocm_A Putative membrane prote 99.5 5.1E-14 1.8E-18 132.0 9.8 117 176-309 36-158 (173)
76 2o16_A Acetoin utilization pro 99.5 2.9E-14 1E-18 131.6 7.9 116 177-307 6-134 (160)
77 3ctu_A CBS domain protein; str 99.5 4.2E-14 1.4E-18 129.7 8.9 115 177-307 16-141 (156)
78 2uv4_A 5'-AMP-activated protei 99.5 2.3E-14 7.8E-19 131.1 6.7 104 189-306 37-149 (152)
79 1pvm_A Conserved hypothetical 99.5 6.1E-14 2.1E-18 132.6 9.8 116 178-307 11-132 (184)
80 3sl7_A CBS domain-containing p 99.5 2.3E-14 7.9E-19 134.3 6.2 114 180-307 8-155 (180)
81 2emq_A Hypothetical conserved 99.5 6.1E-14 2.1E-18 128.6 8.5 117 176-308 11-139 (157)
82 2rc3_A CBS domain; in SITU pro 99.5 5E-14 1.7E-18 125.8 7.2 112 180-307 10-130 (135)
83 3fhm_A Uncharacterized protein 99.5 6.1E-14 2.1E-18 130.1 6.9 115 179-308 27-150 (165)
84 2nyc_A Nuclear protein SNF4; b 99.4 1.1E-13 3.9E-18 124.5 7.0 114 181-306 16-139 (144)
85 1o50_A CBS domain-containing p 99.4 1.2E-13 4.2E-18 126.9 7.3 112 180-307 20-152 (157)
86 1yav_A Hypothetical protein BS 99.4 8.8E-14 3E-18 128.1 6.2 114 178-307 16-141 (159)
87 4fry_A Putative signal-transdu 99.4 1.4E-13 4.7E-18 126.4 6.6 105 189-309 29-136 (157)
88 3kh5_A Protein MJ1225; AMPK, A 99.4 1.3E-13 4.4E-18 138.5 6.8 164 177-357 85-268 (280)
89 2pfi_A Chloride channel protei 99.4 3.1E-13 1.1E-17 124.5 6.5 117 178-307 15-146 (164)
90 2yvy_A MGTE, Mg2+ transporter 99.4 1.1E-12 3.7E-17 132.5 9.1 125 165-308 122-257 (278)
91 2oux_A Magnesium transporter; 99.4 6.4E-13 2.2E-17 134.8 7.1 123 166-307 125-258 (286)
92 2j9l_A Chloride channel protei 99.3 6E-13 2.1E-17 125.3 5.9 104 189-307 33-164 (185)
93 3k6e_A CBS domain protein; str 99.3 2.2E-12 7.6E-17 118.7 8.5 119 18-238 14-137 (156)
94 2yzq_A Putative uncharacterize 99.3 3.7E-12 1.3E-16 128.1 9.7 111 179-303 63-179 (282)
95 2zy9_A Mg2+ transporter MGTE; 99.3 4.4E-12 1.5E-16 137.5 9.9 127 162-307 139-276 (473)
96 2d4z_A Chloride channel protei 99.3 2.3E-12 8E-17 127.7 7.0 119 176-307 13-245 (250)
97 3jtf_A Magnesium and cobalt ef 99.3 9.2E-12 3.2E-16 110.3 9.7 112 17-238 6-121 (129)
98 1ep3_A Dihydroorotate dehydrog 99.3 5.6E-11 1.9E-15 121.8 16.6 166 330-560 112-307 (311)
99 3bo9_A Putative nitroalkan dio 99.3 3.9E-10 1.3E-14 116.3 22.8 126 332-472 92-218 (326)
100 3org_A CMCLC; transporter, tra 99.3 2.6E-12 8.9E-17 144.2 6.1 116 178-308 455-625 (632)
101 3pc3_A CG1753, isoform A; CBS, 99.2 3.4E-12 1.2E-16 140.5 5.8 117 177-309 385-512 (527)
102 2e6f_A Dihydroorotate dehydrog 99.2 1.7E-11 5.9E-16 125.9 10.1 166 329-558 106-309 (314)
103 1jub_A Dihydroorotate dehydrog 99.2 3E-11 1E-15 124.0 11.7 166 329-558 106-307 (311)
104 3nqr_A Magnesium and cobalt ef 99.2 1.5E-11 5E-16 108.7 7.9 53 17-74 4-58 (127)
105 3kpb_A Uncharacterized protein 99.2 1.3E-11 4.3E-16 107.8 6.9 51 17-73 2-52 (122)
106 2v8q_E 5'-AMP-activated protei 99.2 2E-11 7E-16 125.8 8.9 170 181-366 123-322 (330)
107 3sl7_A CBS domain-containing p 99.2 2.5E-11 8.5E-16 113.5 8.6 141 17-238 5-151 (180)
108 3lfr_A Putative metal ION tran 99.2 2.9E-11 9.8E-16 108.2 8.6 115 17-238 4-122 (136)
109 3fhm_A Uncharacterized protein 99.2 2.9E-11 9.9E-16 111.9 8.4 111 24-238 29-145 (165)
110 3oi8_A Uncharacterized protein 99.2 2.6E-11 8.8E-16 111.3 7.8 52 20-73 39-92 (156)
111 2rih_A Conserved protein with 99.2 3E-11 1E-15 108.5 7.8 110 23-238 9-123 (141)
112 3fv6_A YQZB protein; CBS domai 99.2 4.4E-11 1.5E-15 110.0 8.7 51 20-74 18-68 (159)
113 3k2v_A Putative D-arabinose 5- 99.2 3E-11 1E-15 109.7 7.5 51 21-74 30-82 (149)
114 4gqw_A CBS domain-containing p 99.2 1.9E-11 6.7E-16 110.7 5.9 127 21-238 7-138 (152)
115 3lv9_A Putative transporter; C 99.2 3.6E-11 1.2E-15 109.0 7.7 112 21-238 25-140 (148)
116 2qrd_G Protein C1556.08C; AMPK 99.2 2.6E-11 9E-16 125.2 7.6 165 189-367 125-315 (334)
117 3kxr_A Magnesium transporter, 99.2 1.1E-10 3.8E-15 112.3 11.4 107 22-238 57-169 (205)
118 2p9m_A Hypothetical protein MJ 99.1 5.9E-11 2E-15 105.9 8.0 49 23-74 12-60 (138)
119 3gby_A Uncharacterized protein 99.1 4.6E-11 1.6E-15 105.5 7.2 47 23-73 9-55 (128)
120 2yzi_A Hypothetical protein PH 99.1 8E-11 2.8E-15 105.1 8.6 50 22-74 10-59 (138)
121 3q58_A N-acetylmannosamine-6-p 99.1 2.7E-10 9.4E-15 111.2 13.0 123 332-464 91-215 (229)
122 3i8n_A Uncharacterized protein 99.1 1.9E-11 6.5E-16 108.4 4.3 50 22-73 9-60 (130)
123 2ef7_A Hypothetical protein ST 99.1 6E-11 2E-15 105.2 7.6 110 23-238 8-120 (133)
124 3hf7_A Uncharacterized CBS-dom 99.1 2.8E-11 9.6E-16 107.4 5.4 53 17-74 3-57 (130)
125 3lqn_A CBS domain protein; csg 99.1 7.7E-11 2.6E-15 106.9 8.0 55 14-74 13-69 (150)
126 3ctu_A CBS domain protein; str 99.1 9.8E-11 3.4E-15 107.0 8.4 49 22-73 18-68 (156)
127 3lhh_A CBS domain protein; str 99.1 6.4E-11 2.2E-15 110.5 7.2 112 20-238 43-159 (172)
128 2uva_G Fatty acid synthase bet 99.1 3.7E-10 1.3E-14 139.4 15.9 95 379-474 699-810 (2060)
129 2o16_A Acetoin utilization pro 99.1 6.6E-11 2.3E-15 108.9 6.5 50 22-74 8-57 (160)
130 1y5h_A Hypothetical protein RV 99.1 5.3E-11 1.8E-15 105.6 5.5 53 16-74 8-60 (133)
131 3oco_A Hemolysin-like protein 99.1 4.9E-11 1.7E-15 108.9 5.0 112 17-238 21-138 (153)
132 2rc3_A CBS domain; in SITU pro 99.1 1.4E-10 4.8E-15 103.2 7.6 51 17-74 7-60 (135)
133 1pvm_A Conserved hypothetical 99.1 1.7E-10 5.7E-15 108.8 8.6 113 23-238 13-128 (184)
134 1pbj_A Hypothetical protein; s 99.1 8.6E-11 2.9E-15 102.8 6.0 51 17-74 2-52 (125)
135 2nyc_A Nuclear protein SNF4; b 99.1 7.5E-11 2.6E-15 105.8 5.6 55 17-74 9-63 (144)
136 4fry_A Putative signal-transdu 99.1 1.1E-10 3.8E-15 106.8 6.8 51 17-74 8-64 (157)
137 3igs_A N-acetylmannosamine-6-p 99.1 7.6E-10 2.6E-14 108.3 13.1 124 332-464 91-215 (232)
138 3i65_A Dihydroorotate dehydrog 99.1 8.4E-10 2.9E-14 115.8 14.0 174 320-558 183-410 (415)
139 1o50_A CBS domain-containing p 99.1 2.2E-10 7.7E-15 104.9 8.5 52 16-74 16-68 (157)
140 2d4z_A Chloride channel protei 99.1 1E-10 3.5E-15 115.8 6.4 51 23-74 17-67 (250)
141 3bw2_A 2-nitropropane dioxygen 99.1 9.3E-09 3.2E-13 107.9 21.5 131 331-471 111-249 (369)
142 2gjl_A Hypothetical protein PA 99.0 2.1E-09 7.1E-14 111.0 15.3 128 331-471 85-213 (328)
143 2emq_A Hypothetical conserved 99.0 2E-10 6.9E-15 104.9 6.6 50 22-74 14-65 (157)
144 1tv5_A Dhodehase, dihydroorota 99.0 1E-09 3.5E-14 116.7 12.7 125 371-558 296-438 (443)
145 1gte_A Dihydropyrimidine dehyd 99.0 1.3E-09 4.4E-14 129.0 15.0 174 320-557 636-851 (1025)
146 3ocm_A Putative membrane prote 99.0 4.7E-10 1.6E-14 104.9 9.0 53 19-73 36-90 (173)
147 1yav_A Hypothetical protein BS 99.0 2.7E-10 9.3E-15 104.4 7.0 52 17-74 15-68 (159)
148 2pfi_A Chloride channel protei 99.0 2.3E-10 7.9E-15 105.1 5.9 52 17-74 14-67 (164)
149 4ef8_A Dihydroorotate dehydrog 99.0 9.8E-10 3.4E-14 113.8 10.6 166 329-558 139-342 (354)
150 2oux_A Magnesium transporter; 99.0 4.5E-10 1.5E-14 113.8 7.7 106 23-238 141-254 (286)
151 3zwt_A Dihydroorotate dehydrog 99.0 5.9E-09 2E-13 108.7 16.3 156 340-558 174-363 (367)
152 2zy9_A Mg2+ transporter MGTE; 99.0 8.4E-10 2.9E-14 119.5 9.7 126 2-238 134-272 (473)
153 2j9l_A Chloride channel protei 99.0 2.7E-10 9.1E-15 107.0 5.0 53 16-74 11-71 (185)
154 2uv4_A 5'-AMP-activated protei 99.0 6.5E-10 2.2E-14 101.2 7.4 45 27-74 29-73 (152)
155 1y0e_A Putative N-acetylmannos 99.0 7.2E-09 2.5E-13 100.8 15.1 128 332-463 78-208 (223)
156 2yvy_A MGTE, Mg2+ transporter 99.0 9.3E-10 3.2E-14 110.9 8.9 107 22-238 138-252 (278)
157 2z6i_A Trans-2-enoyl-ACP reduc 99.0 6.7E-09 2.3E-13 107.4 14.8 127 331-471 77-203 (332)
158 3org_A CMCLC; transporter, tra 98.9 7.7E-10 2.6E-14 124.2 6.9 53 16-74 453-508 (632)
159 3oix_A Putative dihydroorotate 98.9 2.9E-09 1E-13 109.9 9.9 166 329-558 141-340 (345)
160 1f76_A Dihydroorotate dehydrog 98.8 1.4E-08 4.7E-13 105.2 12.5 131 331-463 155-322 (336)
161 3lab_A Putative KDPG (2-keto-3 98.8 3.6E-08 1.2E-12 94.2 12.6 107 329-457 25-137 (217)
162 3pc3_A CG1753, isoform A; CBS, 98.8 4.7E-09 1.6E-13 115.4 7.4 50 21-73 386-437 (527)
163 1vhn_A Putative flavin oxidore 98.8 2E-08 6.9E-13 103.1 11.7 125 329-464 71-218 (318)
164 1yxy_A Putative N-acetylmannos 98.8 3.9E-08 1.3E-12 96.3 12.6 124 332-463 91-219 (234)
165 3tsm_A IGPS, indole-3-glycerol 98.7 2.3E-07 8E-12 92.2 16.9 182 263-466 75-256 (272)
166 4e38_A Keto-hydroxyglutarate-a 98.7 1.2E-07 4.2E-12 91.9 14.1 108 329-458 46-153 (232)
167 3ghd_A A cystathionine beta-sy 98.7 1E-08 3.5E-13 80.6 4.5 43 28-74 1-43 (70)
168 3qja_A IGPS, indole-3-glycerol 98.7 1.1E-07 3.9E-12 94.9 11.8 180 263-465 68-248 (272)
169 3ghd_A A cystathionine beta-sy 98.6 1.3E-08 4.4E-13 80.0 3.5 60 189-263 8-70 (70)
170 1wa3_A 2-keto-3-deoxy-6-phosph 98.5 5.3E-07 1.8E-11 86.3 11.5 130 329-463 22-182 (205)
171 1wv2_A Thiazole moeity, thiazo 98.5 4E-07 1.4E-11 88.3 10.4 121 334-464 92-221 (265)
172 3l2b_A Probable manganase-depe 98.5 6.2E-07 2.1E-11 88.1 12.0 60 246-307 5-64 (245)
173 3b0p_A TRNA-dihydrouridine syn 98.5 1.5E-06 5.1E-11 90.2 14.7 130 329-465 70-231 (350)
174 2uv8_G Fatty acid synthase sub 98.5 1.5E-07 5E-12 115.8 7.5 136 333-474 664-817 (2051)
175 1vzw_A Phosphoribosyl isomeras 98.4 1.3E-07 4.5E-12 93.1 5.5 177 268-465 33-228 (244)
176 3hgj_A Chromate reductase; TIM 98.4 2.7E-06 9.1E-11 88.3 15.5 131 330-463 153-322 (349)
177 2y88_A Phosphoribosyl isomeras 98.4 1.3E-07 4.3E-12 93.2 4.6 178 268-466 32-232 (244)
178 1z41_A YQJM, probable NADH-dep 98.4 3.2E-06 1.1E-10 87.3 14.9 131 330-464 145-312 (338)
179 1ka9_F Imidazole glycerol phos 98.4 1.4E-06 5E-11 86.0 11.8 137 329-466 31-232 (252)
180 1thf_D HISF protein; thermophI 98.4 3.2E-06 1.1E-10 83.5 14.3 134 330-464 31-229 (253)
181 3gr7_A NADPH dehydrogenase; fl 98.4 5.4E-06 1.8E-10 85.6 15.4 130 330-463 145-311 (340)
182 1vc4_A Indole-3-glycerol phosp 98.4 2.2E-06 7.6E-11 84.7 12.0 176 267-465 65-242 (254)
183 1wbh_A KHG/KDPG aldolase; lyas 98.3 6.9E-06 2.4E-10 79.0 14.6 108 329-458 28-135 (214)
184 1vhc_A Putative KHG/KDPG aldol 98.3 4.6E-06 1.6E-10 80.8 13.4 108 329-458 29-136 (224)
185 1h5y_A HISF; histidine biosynt 98.3 2.7E-06 9.4E-11 83.6 11.7 134 329-463 33-231 (253)
186 3l5l_A Xenobiotic reductase A; 98.3 4.1E-06 1.4E-10 87.4 13.3 131 330-463 159-329 (363)
187 1mzh_A Deoxyribose-phosphate a 98.3 9.5E-06 3.3E-10 78.8 14.9 120 333-462 74-207 (225)
188 1qop_A Tryptophan synthase alp 98.3 5.4E-06 1.9E-10 82.8 13.5 134 330-463 32-238 (268)
189 3o07_A Pyridoxine biosynthesis 98.3 2.3E-07 8E-12 90.6 3.2 128 332-465 80-235 (291)
190 3tjx_A Dihydroorotate dehydrog 98.3 2E-06 7E-11 89.4 10.2 66 430-558 277-342 (354)
191 3nav_A Tryptophan synthase alp 98.3 5E-06 1.7E-10 82.7 12.4 135 329-463 34-241 (271)
192 1yad_A Regulatory protein TENI 98.3 4E-06 1.4E-10 81.1 11.5 116 336-465 82-198 (221)
193 3tdn_A FLR symmetric alpha-bet 98.3 8.2E-07 2.8E-11 87.6 6.6 133 330-463 36-233 (247)
194 2htm_A Thiazole biosynthesis p 98.3 2E-06 6.9E-11 83.7 9.0 99 358-465 113-213 (268)
195 1mxs_A KDPG aldolase; 2-keto-3 98.3 5E-06 1.7E-10 80.6 11.7 107 330-458 39-145 (225)
196 3vnd_A TSA, tryptophan synthas 98.2 9.6E-06 3.3E-10 80.5 13.4 135 329-463 32-239 (267)
197 2w6r_A Imidazole glycerol phos 98.2 7.5E-06 2.6E-10 81.5 12.7 181 268-466 31-236 (266)
198 1pii_A N-(5'phosphoribosyl)ant 98.2 1.4E-05 4.8E-10 84.9 15.2 120 335-465 123-242 (452)
199 1i4n_A Indole-3-glycerol phosp 98.2 3.9E-06 1.3E-10 82.4 9.9 121 335-466 116-237 (251)
200 4adt_A Pyridoxine biosynthetic 98.2 5.6E-07 1.9E-11 90.6 3.9 123 332-465 90-244 (297)
201 1rd5_A Tryptophan synthase alp 98.2 6.5E-06 2.2E-10 81.9 11.6 133 330-463 33-234 (262)
202 1geq_A Tryptophan synthase alp 98.2 1.7E-05 5.9E-10 78.0 13.6 132 330-463 20-224 (248)
203 3fio_A A cystathionine beta-sy 98.2 1.6E-06 5.5E-11 67.3 4.7 48 259-307 1-48 (70)
204 3fio_A A cystathionine beta-sy 98.2 1.5E-06 5.3E-11 67.4 4.5 43 28-74 1-43 (70)
205 3f4w_A Putative hexulose 6 pho 98.1 1.5E-05 5E-10 76.5 12.2 118 334-464 69-192 (211)
206 2ekc_A AQ_1548, tryptophan syn 98.1 2.5E-05 8.4E-10 77.7 13.6 133 330-463 32-238 (262)
207 1vyr_A Pentaerythritol tetrani 98.1 3.4E-05 1.2E-09 80.3 14.3 127 330-465 162-329 (364)
208 3ngj_A Deoxyribose-phosphate a 98.1 4.7E-05 1.6E-09 73.7 13.8 119 333-460 99-230 (239)
209 2gou_A Oxidoreductase, FMN-bin 98.0 3.3E-05 1.1E-09 80.5 13.3 127 330-465 162-328 (365)
210 2v82_A 2-dehydro-3-deoxy-6-pho 98.0 3E-05 1E-09 74.4 12.0 109 333-464 71-181 (212)
211 3jr2_A Hexulose-6-phosphate sy 98.0 1.4E-05 4.9E-10 77.1 9.6 122 334-463 75-198 (218)
212 1jvn_A Glutamine, bifunctional 98.0 1.8E-05 6E-10 87.1 11.3 183 268-462 281-529 (555)
213 2zbt_A Pyridoxal biosynthesis 98.0 2.4E-06 8.1E-11 86.7 3.9 126 332-463 90-242 (297)
214 3oa3_A Aldolase; structural ge 98.0 0.00012 4.1E-09 72.6 15.8 121 333-460 130-264 (288)
215 3kru_A NADH:flavin oxidoreduct 98.0 6.4E-05 2.2E-09 77.5 14.1 131 330-464 144-312 (343)
216 3l5a_A NADH/flavin oxidoreduct 98.0 6.3E-05 2.1E-09 79.6 14.0 133 330-464 171-351 (419)
217 2r14_A Morphinone reductase; H 98.0 2.6E-05 8.9E-10 81.5 10.9 128 330-465 167-334 (377)
218 2nv1_A Pyridoxal biosynthesis 97.9 4.2E-05 1.4E-09 77.8 11.8 134 331-465 30-244 (305)
219 1xm3_A Thiazole biosynthesis p 97.9 4.2E-05 1.4E-09 76.0 11.4 123 334-465 84-213 (264)
220 3o63_A Probable thiamine-phosp 97.9 4.9E-05 1.7E-09 74.5 11.6 115 338-465 108-225 (243)
221 4e38_A Keto-hydroxyglutarate-a 97.9 3E-05 1E-09 75.1 9.5 110 332-463 96-206 (232)
222 1icp_A OPR1, 12-oxophytodienoa 97.9 5E-05 1.7E-09 79.4 11.8 128 330-465 168-336 (376)
223 1qo2_A Molecule: N-((5-phospho 97.9 1.7E-05 6E-10 77.7 7.1 176 268-465 31-229 (241)
224 3gka_A N-ethylmaleimide reduct 97.9 0.00011 3.8E-09 76.1 13.5 121 330-465 162-322 (361)
225 4ab4_A Xenobiotic reductase B; 97.9 0.00012 4.1E-09 75.9 13.5 121 330-465 154-314 (362)
226 2fli_A Ribulose-phosphate 3-ep 97.9 0.00011 3.8E-09 70.7 12.5 181 267-465 16-204 (220)
227 4a29_A Engineered retro-aldol 97.9 8.9E-05 3.1E-09 72.1 11.5 122 335-466 119-240 (258)
228 1ujp_A Tryptophan synthase alp 97.8 7.4E-05 2.5E-09 74.4 11.1 130 330-463 31-233 (271)
229 1ps9_A 2,4-dienoyl-COA reducta 97.8 0.00014 4.7E-09 82.2 14.3 134 330-464 142-315 (671)
230 2hsa_B 12-oxophytodienoate red 97.8 0.00014 4.7E-09 76.6 13.3 134 330-465 172-354 (402)
231 2qjg_A Putative aldolase MJ040 97.8 0.00011 3.9E-09 73.2 11.6 118 332-465 102-243 (273)
232 2yw3_A 4-hydroxy-2-oxoglutarat 97.8 0.00018 6.3E-09 68.7 12.5 106 329-458 25-130 (207)
233 3zen_D Fatty acid synthase; tr 97.8 3.3E-05 1.1E-09 98.8 8.9 132 333-471 505-658 (3089)
234 3qja_A IGPS, indole-3-glycerol 97.8 0.00036 1.2E-08 69.4 14.5 118 330-461 73-191 (272)
235 4gj1_A 1-(5-phosphoribosyl)-5- 97.7 0.00016 5.4E-09 70.9 11.2 131 330-462 32-227 (243)
236 2yw3_A 4-hydroxy-2-oxoglutarat 97.7 0.00016 5.6E-09 69.0 10.9 112 332-464 73-184 (207)
237 1xi3_A Thiamine phosphate pyro 97.7 0.00017 5.9E-09 68.9 11.1 114 336-464 80-195 (215)
238 2tps_A Protein (thiamin phosph 97.7 0.00012 4.2E-09 70.7 10.0 113 336-463 88-204 (227)
239 3aty_A Tcoye, prostaglandin F2 97.7 0.00016 5.5E-09 75.6 11.3 124 330-464 175-341 (379)
240 3inp_A D-ribulose-phosphate 3- 97.7 0.00019 6.6E-09 70.2 10.5 143 320-463 29-227 (246)
241 3ovp_A Ribulose-phosphate 3-ep 97.6 0.00026 8.8E-09 68.7 10.5 134 330-464 18-202 (228)
242 3ajx_A 3-hexulose-6-phosphate 97.6 0.00061 2.1E-08 64.8 12.6 121 334-465 69-192 (207)
243 2yzr_A Pyridoxal biosynthesis 97.6 0.0004 1.4E-08 69.9 11.4 66 332-398 27-102 (330)
244 2h6r_A Triosephosphate isomera 97.5 0.0004 1.4E-08 66.9 10.9 120 336-465 76-205 (219)
245 3ceu_A Thiamine phosphate pyro 97.5 0.0004 1.4E-08 66.5 10.1 80 379-465 95-178 (210)
246 2agk_A 1-(5-phosphoribosyl)-5- 97.5 0.00043 1.5E-08 68.5 10.4 172 267-462 38-239 (260)
247 3lab_A Putative KDPG (2-keto-3 97.5 0.0003 1E-08 67.1 8.9 111 332-463 75-191 (217)
248 2f6u_A GGGPS, (S)-3-O-geranylg 97.5 0.00051 1.8E-08 66.5 10.5 124 331-463 22-222 (234)
249 3tsm_A IGPS, indole-3-glycerol 97.4 0.0014 4.9E-08 64.9 13.4 119 329-461 79-198 (272)
250 1viz_A PCRB protein homolog; s 97.4 0.00074 2.5E-08 65.7 11.0 129 331-463 22-214 (240)
251 3r12_A Deoxyribose-phosphate a 97.4 0.0036 1.2E-07 61.2 15.6 119 333-459 115-245 (260)
252 1ub3_A Aldolase protein; schif 97.4 0.002 6.7E-08 61.9 13.5 119 333-459 75-205 (220)
253 3k30_A Histamine dehydrogenase 97.4 0.00049 1.7E-08 77.9 10.8 132 330-465 157-330 (690)
254 1vhc_A Putative KHG/KDPG aldol 97.4 0.00055 1.9E-08 66.1 9.6 109 332-463 79-189 (224)
255 1tqj_A Ribulose-phosphate 3-ep 97.4 0.00056 1.9E-08 66.4 9.6 121 334-464 77-206 (230)
256 1o94_A Tmadh, trimethylamine d 97.4 0.00098 3.4E-08 75.9 13.0 131 330-464 150-326 (729)
257 1rpx_A Protein (ribulose-phosp 97.4 0.00078 2.7E-08 65.3 10.3 123 333-465 82-213 (230)
258 3tdn_A FLR symmetric alpha-bet 97.3 0.00024 8.1E-09 69.8 6.6 76 381-463 37-112 (247)
259 1wbh_A KHG/KDPG aldolase; lyas 97.3 0.00063 2.1E-08 65.3 9.3 108 333-463 79-188 (214)
260 3glc_A Aldolase LSRF; TIM barr 97.3 0.0022 7.6E-08 64.3 12.7 113 335-465 131-263 (295)
261 1h1y_A D-ribulose-5-phosphate 97.3 0.0025 8.6E-08 61.6 12.9 120 334-464 79-206 (228)
262 1mxs_A KDPG aldolase; 2-keto-3 97.2 0.001 3.5E-08 64.3 9.5 108 333-463 89-198 (225)
263 3nl6_A Thiamine biosynthetic b 97.2 0.0021 7.1E-08 70.1 12.9 85 378-465 114-215 (540)
264 1w8s_A FBP aldolase, fructose- 97.2 0.0023 7.8E-08 63.4 12.1 117 333-465 96-237 (263)
265 3ndo_A Deoxyribose-phosphate a 97.2 0.0086 2.9E-07 57.6 15.4 119 333-459 84-219 (231)
266 3vzx_A Heptaprenylglyceryl pho 97.2 0.0016 5.3E-08 62.8 10.1 121 334-463 23-212 (228)
267 2v82_A 2-dehydro-3-deoxy-6-pho 97.1 0.004 1.4E-07 59.3 12.3 107 329-458 19-127 (212)
268 1vcv_A Probable deoxyribose-ph 97.1 0.0091 3.1E-07 57.4 14.7 120 333-460 71-221 (226)
269 3kts_A Glycerol uptake operon 97.1 0.0034 1.2E-07 58.6 11.2 35 428-462 148-182 (192)
270 3w01_A Heptaprenylglyceryl pho 97.1 0.0021 7.1E-08 62.0 10.0 59 333-398 27-86 (235)
271 2p10_A MLL9387 protein; putati 97.1 0.0045 1.5E-07 60.8 12.1 127 330-462 109-262 (286)
272 1ka9_F Imidazole glycerol phos 97.0 0.00092 3.2E-08 65.6 7.1 77 381-464 33-109 (252)
273 1vc4_A Indole-3-glycerol phosp 97.0 0.0052 1.8E-07 60.5 12.4 119 330-463 66-185 (254)
274 3ctl_A D-allulose-6-phosphate 97.0 0.0036 1.2E-07 60.6 10.7 120 334-463 72-200 (231)
275 2z6i_A Trans-2-enoyl-ACP reduc 97.0 0.017 5.8E-07 59.1 16.4 65 333-398 121-190 (332)
276 3cu2_A Ribulose-5-phosphate 3- 97.0 0.0037 1.3E-07 60.7 10.6 124 332-463 82-221 (237)
277 1qap_A Quinolinic acid phospho 96.9 0.003 1E-07 63.4 9.9 89 358-462 195-283 (296)
278 2gjl_A Hypothetical protein PA 96.9 0.03 1E-06 57.1 17.4 65 333-398 129-200 (328)
279 3ffs_A Inosine-5-monophosphate 96.9 0.003 1E-07 66.1 9.7 67 139-206 146-212 (400)
280 3vk5_A MOEO5; TIM barrel, tran 96.9 0.0027 9.1E-08 62.6 8.5 69 385-463 192-260 (286)
281 1hg3_A Triosephosphate isomera 96.8 0.016 5.3E-07 55.8 13.7 122 335-465 81-211 (225)
282 1w0m_A TIM, triosephosphate is 96.8 0.016 5.3E-07 55.8 13.6 121 336-465 79-208 (226)
283 1x1o_A Nicotinate-nucleotide p 96.8 0.0036 1.2E-07 62.5 9.3 90 358-463 182-272 (286)
284 2a4a_A Deoxyribose-phosphate a 96.8 0.0051 1.7E-07 60.9 10.2 115 333-454 110-249 (281)
285 2w6r_A Imidazole glycerol phos 96.8 0.0023 7.8E-08 63.3 7.8 76 381-463 32-107 (266)
286 1thf_D HISF protein; thermophI 96.8 0.0022 7.6E-08 62.8 7.7 75 382-463 33-107 (253)
287 2b7n_A Probable nicotinate-nuc 96.8 0.0017 5.8E-08 64.6 6.6 91 358-463 168-261 (273)
288 3exr_A RMPD (hexulose-6-phosph 96.8 0.0095 3.3E-07 57.3 11.7 122 335-464 75-201 (221)
289 3tjl_A NADPH dehydrogenase; OL 96.8 0.0026 9E-08 66.6 8.2 130 331-465 170-352 (407)
290 3paj_A Nicotinate-nucleotide p 96.7 0.0057 1.9E-07 61.6 10.1 89 358-462 218-306 (320)
291 2czd_A Orotidine 5'-phosphate 96.7 0.012 4.1E-07 55.9 11.7 111 332-464 68-190 (208)
292 3tha_A Tryptophan synthase alp 96.7 0.0085 2.9E-07 58.5 10.7 121 332-463 106-231 (252)
293 1n7k_A Deoxyribose-phosphate a 96.6 0.014 4.9E-07 56.3 11.8 116 333-459 92-221 (234)
294 1p1x_A Deoxyribose-phosphate a 96.6 0.0073 2.5E-07 59.3 9.8 115 333-454 89-222 (260)
295 4a3u_A NCR, NADH\:flavin oxido 96.6 0.011 3.7E-07 61.2 11.4 129 330-465 153-321 (358)
296 1qpo_A Quinolinate acid phosph 96.6 0.0059 2E-07 60.8 9.0 91 358-463 181-273 (284)
297 1qo2_A Molecule: N-((5-phospho 96.6 0.0014 4.7E-08 64.0 4.2 76 381-464 32-107 (241)
298 1to3_A Putative aldolase YIHT; 96.5 0.013 4.5E-07 59.1 11.4 119 335-463 114-258 (304)
299 1q6o_A Humps, 3-keto-L-gulonat 96.5 0.011 3.7E-07 56.6 10.2 121 335-464 73-196 (216)
300 2jbm_A Nicotinate-nucleotide p 96.5 0.0028 9.5E-08 63.8 6.2 90 359-463 184-276 (299)
301 3tqv_A Nicotinate-nucleotide p 96.5 0.0072 2.5E-07 60.0 9.0 89 358-462 185-273 (287)
302 3c2e_A Nicotinate-nucleotide p 96.5 0.0024 8.1E-08 64.2 5.6 90 358-462 185-280 (294)
303 1tqx_A D-ribulose-5-phosphate 96.5 0.016 5.4E-07 55.9 11.0 110 343-463 86-205 (227)
304 1o4u_A Type II quinolic acid p 96.4 0.0031 1E-07 62.9 5.8 91 358-463 179-272 (285)
305 3gnn_A Nicotinate-nucleotide p 96.3 0.0079 2.7E-07 60.0 8.0 89 358-462 196-284 (298)
306 1h5y_A HISF; histidine biosynt 96.3 0.0055 1.9E-07 59.6 6.8 76 381-463 35-110 (253)
307 3l0g_A Nicotinate-nucleotide p 96.3 0.012 4E-07 58.6 9.1 89 358-462 194-282 (300)
308 3q58_A N-acetylmannosamine-6-p 96.3 0.036 1.2E-06 53.5 12.3 109 330-459 37-156 (229)
309 4a29_A Engineered retro-aldol 96.3 0.025 8.7E-07 54.9 10.9 115 332-461 67-182 (258)
310 3igs_A N-acetylmannosamine-6-p 96.2 0.042 1.5E-06 53.1 12.4 109 330-459 37-156 (232)
311 2y88_A Phosphoribosyl isomeras 96.2 0.0096 3.3E-07 57.9 7.9 75 381-463 33-107 (244)
312 1i4n_A Indole-3-glycerol phosp 96.2 0.035 1.2E-06 54.3 11.7 115 330-459 62-178 (251)
313 1vzw_A Phosphoribosyl isomeras 96.1 0.0076 2.6E-07 58.7 6.6 75 381-463 34-108 (244)
314 4adt_A Pyridoxine biosynthetic 95.9 0.013 4.3E-07 58.8 7.4 111 333-459 32-152 (297)
315 1ub3_A Aldolase protein; schif 95.8 0.082 2.8E-06 50.5 12.1 118 329-458 19-152 (220)
316 3iv3_A Tagatose 1,6-diphosphat 95.7 0.064 2.2E-06 54.4 11.3 126 335-462 116-283 (332)
317 1pii_A N-(5'phosphoribosyl)ant 95.6 0.075 2.6E-06 56.3 12.1 115 330-459 69-184 (452)
318 3cwo_X Beta/alpha-barrel prote 95.5 0.026 8.7E-07 53.8 7.6 72 383-462 134-206 (237)
319 1y0e_A Putative N-acetylmannos 95.5 0.17 5.8E-06 48.2 13.2 114 329-462 23-149 (223)
320 3s1x_A Probable transaldolase; 95.5 0.23 7.7E-06 47.4 13.6 121 330-462 68-191 (223)
321 3o07_A Pyridoxine biosynthesis 95.3 0.019 6.4E-07 56.2 5.6 109 332-456 21-139 (291)
322 3jr2_A Hexulose-6-phosphate sy 95.1 0.19 6.4E-06 47.9 12.0 128 317-458 7-138 (218)
323 3f4w_A Putative hexulose 6 pho 95.0 0.24 8.2E-06 46.6 12.5 126 321-460 5-135 (211)
324 3ajx_A 3-hexulose-6-phosphate 94.9 0.19 6.6E-06 47.2 11.4 116 329-459 13-134 (207)
325 3r8r_A Transaldolase; pentose 94.9 0.075 2.6E-06 50.3 8.3 122 330-462 66-189 (212)
326 2qr6_A IMP dehydrogenase/GMP r 94.7 0.12 4.1E-06 54.0 10.5 63 69-134 36-99 (393)
327 3khj_A Inosine-5-monophosphate 94.7 0.28 9.5E-06 50.6 12.9 113 332-459 59-173 (361)
328 4gj1_A 1-(5-phosphoribosyl)-5- 94.7 0.076 2.6E-06 51.7 8.1 73 383-463 35-108 (243)
329 1mdl_A Mandelate racemase; iso 94.7 0.29 9.8E-06 50.3 13.0 118 330-462 147-273 (359)
330 2ovl_A Putative racemase; stru 94.6 0.43 1.5E-05 49.3 14.1 118 330-462 149-275 (371)
331 4gbu_A NADPH dehydrogenase 1; 94.5 0.063 2.2E-06 56.3 7.4 132 330-465 173-354 (400)
332 2tps_A Protein (thiamin phosph 94.3 0.19 6.4E-06 47.9 10.0 109 331-463 33-147 (227)
333 1rvk_A Isomerase/lactonizing e 94.2 0.73 2.5E-05 47.7 15.0 119 329-461 151-284 (382)
334 1yxy_A Putative N-acetylmannos 94.2 0.3 1E-05 46.8 11.2 109 330-456 37-157 (234)
335 1vkf_A Glycerol uptake operon 94.2 0.03 1E-06 51.9 3.8 31 429-460 148-178 (188)
336 2pgw_A Muconate cycloisomerase 94.2 0.73 2.5E-05 47.7 15.0 118 330-462 150-274 (384)
337 2og9_A Mandelate racemase/muco 94.2 0.4 1.4E-05 50.0 12.9 116 330-459 165-288 (393)
338 1viz_A PCRB protein homolog; s 94.1 0.47 1.6E-05 45.8 12.3 62 334-398 143-209 (240)
339 2zbt_A Pyridoxal biosynthesis 94.1 0.085 2.9E-06 52.9 7.3 111 332-458 31-151 (297)
340 3ngj_A Deoxyribose-phosphate a 94.0 0.43 1.5E-05 45.9 11.7 124 330-462 44-180 (239)
341 1wv2_A Thiazole moeity, thiazo 93.7 0.16 5.6E-06 49.2 7.9 90 267-398 122-215 (265)
342 3vnd_A TSA, tryptophan synthas 93.6 0.9 3.1E-05 44.6 13.4 65 333-398 162-234 (267)
343 4eiv_A Deoxyribose-phosphate a 93.4 0.86 2.9E-05 45.0 12.6 114 334-454 105-256 (297)
344 1xi3_A Thiamine phosphate pyro 93.4 0.79 2.7E-05 43.0 12.3 109 330-462 27-138 (215)
345 3o63_A Probable thiamine-phosp 93.3 0.42 1.4E-05 46.3 10.3 111 330-463 44-166 (243)
346 1tqj_A Ribulose-phosphate 3-ep 93.3 0.16 5.6E-06 48.8 7.4 123 329-465 17-147 (230)
347 2nql_A AGR_PAT_674P, isomerase 93.2 0.46 1.6E-05 49.4 11.2 116 329-459 166-289 (388)
348 4fo4_A Inosine 5'-monophosphat 93.2 0.21 7E-06 51.6 8.3 72 136-207 107-178 (366)
349 1jvn_A Glutamine, bifunctional 93.1 0.12 4E-06 56.7 6.8 76 382-462 283-370 (555)
350 1vr6_A Phospho-2-dehydro-3-deo 93.1 5.8 0.0002 40.4 18.8 171 269-456 26-244 (350)
351 2rdx_A Mandelate racemase/muco 93.1 1.5 5.1E-05 45.3 14.9 116 329-462 147-270 (379)
352 1qop_A Tryptophan synthase alp 93.0 1.2 4E-05 43.8 13.3 40 358-398 193-233 (268)
353 2oz8_A MLL7089 protein; struct 93.0 1.5 5E-05 45.6 14.7 115 330-459 148-273 (389)
354 1tzz_A Hypothetical protein L1 92.9 1.3 4.6E-05 45.9 14.4 119 330-462 168-298 (392)
355 1nu5_A Chloromuconate cycloiso 92.9 1 3.6E-05 46.3 13.4 118 329-460 144-270 (370)
356 1h1y_A D-ribulose-5-phosphate 92.8 0.58 2E-05 44.7 10.4 123 329-464 19-150 (228)
357 3oa3_A Aldolase; structural ge 92.6 0.32 1.1E-05 48.1 8.4 122 330-462 75-211 (288)
358 3nvt_A 3-deoxy-D-arabino-heptu 92.5 1.3 4.5E-05 45.8 13.3 110 330-456 157-280 (385)
359 2pp0_A L-talarate/galactarate 92.4 1.1 3.7E-05 46.7 12.8 116 330-459 178-301 (398)
360 3stp_A Galactonate dehydratase 92.3 1.5 5E-05 46.0 13.6 118 329-460 181-312 (412)
361 2qgy_A Enolase from the enviro 92.3 1.1 3.7E-05 46.6 12.6 118 330-461 152-277 (391)
362 1vli_A Spore coat polysacchari 92.2 2.4 8.3E-05 43.6 14.8 123 319-458 29-191 (385)
363 3iwp_A Copper homeostasis prot 92.1 0.82 2.8E-05 45.1 10.6 114 332-456 114-235 (287)
364 2gdq_A YITF; mandelate racemas 92.1 0.83 2.8E-05 47.3 11.4 118 329-460 141-267 (382)
365 2wqp_A Polysialic acid capsule 91.9 2.5 8.4E-05 43.1 14.2 112 330-458 36-180 (349)
366 2p8b_A Mandelate racemase/muco 91.8 2.5 8.5E-05 43.4 14.6 117 329-460 143-268 (369)
367 3ru6_A Orotidine 5'-phosphate 91.8 1.9 6.6E-05 42.9 13.1 112 334-465 95-236 (303)
368 3r2g_A Inosine 5'-monophosphat 91.7 0.24 8.2E-06 50.9 6.6 135 69-206 8-169 (361)
369 3ozy_A Putative mandelate race 91.4 2 7E-05 44.5 13.5 119 329-462 153-280 (389)
370 3rcy_A Mandelate racemase/muco 91.4 3.4 0.00012 43.4 15.3 117 329-459 148-284 (433)
371 1tkk_A Similar to chloromucona 91.4 2.1 7.2E-05 43.9 13.5 118 329-460 142-269 (366)
372 2qdd_A Mandelate racemase/muco 91.2 3.3 0.00011 42.6 14.9 117 329-462 147-270 (378)
373 1tv5_A Dhodehase, dihydroorota 91.1 0.61 2.1E-05 49.3 9.0 69 330-398 312-401 (443)
374 3tfx_A Orotidine 5'-phosphate 91.0 2.2 7.5E-05 41.6 12.3 129 318-465 58-222 (259)
375 3b0p_A TRNA-dihydrouridine syn 90.9 0.65 2.2E-05 47.6 8.8 68 330-398 145-224 (350)
376 2fli_A Ribulose-phosphate 3-ep 90.8 0.82 2.8E-05 43.1 9.0 116 329-458 16-137 (220)
377 1zco_A 2-dehydro-3-deoxyphosph 90.8 3.1 0.00011 40.6 13.4 105 329-450 37-151 (262)
378 1f76_A Dihydroorotate dehydrog 90.8 0.57 2E-05 47.6 8.3 68 330-397 226-316 (336)
379 4dwd_A Mandelate racemase/muco 90.8 2.8 9.4E-05 43.6 13.7 120 329-462 141-274 (393)
380 3i65_A Dihydroorotate dehydrog 90.6 0.76 2.6E-05 48.0 9.1 69 330-398 284-373 (415)
381 3zwt_A Dihydroorotate dehydrog 90.5 0.74 2.5E-05 47.5 8.9 69 330-398 235-326 (367)
382 3t05_A Pyruvate kinase, PK; te 90.4 15 0.00052 40.0 19.5 120 329-459 193-332 (606)
383 3r12_A Deoxyribose-phosphate a 90.4 2.1 7.3E-05 41.6 11.5 124 330-462 60-196 (260)
384 3ugv_A Enolase; enzyme functio 90.4 3.6 0.00012 42.6 14.2 117 329-459 173-300 (390)
385 3i4k_A Muconate lactonizing en 90.2 5.6 0.00019 41.0 15.5 120 329-462 150-278 (383)
386 2qde_A Mandelate racemase/muco 90.2 2.9 0.0001 43.3 13.4 115 330-459 148-270 (397)
387 1n7k_A Deoxyribose-phosphate a 90.2 2.7 9.4E-05 40.2 12.0 115 329-456 36-165 (234)
388 2yyu_A Orotidine 5'-phosphate 90.2 0.52 1.8E-05 45.7 7.1 128 334-464 74-220 (246)
389 3gr7_A NADPH dehydrogenase; fl 90.1 1 3.6E-05 45.8 9.6 69 329-398 229-306 (340)
390 3m47_A Orotidine 5'-phosphate 90.1 2.5 8.5E-05 40.4 11.7 186 251-464 6-207 (228)
391 1rpx_A Protein (ribulose-phosp 90.0 1.6 5.4E-05 41.5 10.3 119 329-461 23-149 (230)
392 3tj4_A Mandelate racemase; eno 90.0 4.3 0.00015 41.7 14.3 116 330-459 154-278 (372)
393 3dg3_A Muconate cycloisomerase 90.0 5.3 0.00018 40.9 15.0 117 329-459 141-266 (367)
394 1eix_A Orotidine 5'-monophosph 90.0 0.75 2.6E-05 44.6 8.0 144 318-464 67-226 (245)
395 3toy_A Mandelate racemase/muco 90.0 3.2 0.00011 42.9 13.3 118 329-460 169-295 (383)
396 1mzh_A Deoxyribose-phosphate a 89.8 0.6 2.1E-05 44.6 7.1 65 330-396 133-201 (225)
397 3g8r_A Probable spore coat pol 89.8 5.7 0.0002 40.3 14.5 81 360-457 81-166 (350)
398 3ctl_A D-allulose-6-phosphate 89.7 0.85 2.9E-05 43.8 8.0 114 330-458 14-134 (231)
399 1wx0_A Transaldolase; structur 89.7 1.5 5.1E-05 41.8 9.6 121 330-462 74-197 (223)
400 1vcv_A Probable deoxyribose-ph 89.7 0.73 2.5E-05 44.0 7.5 122 329-462 17-151 (226)
401 3i6e_A Muconate cycloisomerase 89.6 6.1 0.00021 40.8 15.2 117 330-460 151-274 (385)
402 3o1n_A 3-dehydroquinate dehydr 89.6 7.2 0.00025 38.3 14.9 118 331-460 54-198 (276)
403 2hjp_A Phosphonopyruvate hydro 89.5 2.1 7.2E-05 42.4 10.9 92 362-458 7-109 (290)
404 3jva_A Dipeptide epimerase; en 89.4 5.3 0.00018 40.7 14.4 119 328-461 140-266 (354)
405 2zad_A Muconate cycloisomerase 89.3 6.9 0.00024 39.6 15.1 115 329-458 141-264 (345)
406 4h3d_A 3-dehydroquinate dehydr 89.2 11 0.00039 36.5 15.9 120 329-460 32-178 (258)
407 2hzg_A Mandelate racemase/muco 89.1 5.6 0.00019 41.2 14.6 119 329-461 147-279 (401)
408 3m5v_A DHDPS, dihydrodipicolin 89.1 2.7 9.3E-05 41.9 11.6 69 330-398 29-109 (301)
409 3noy_A 4-hydroxy-3-methylbut-2 89.0 1.5 5.1E-05 44.4 9.3 92 330-435 47-138 (366)
410 2yxb_A Coenzyme B12-dependent 89.0 2 6.8E-05 38.6 9.5 69 328-396 55-125 (161)
411 1xky_A Dihydrodipicolinate syn 88.9 3.2 0.00011 41.4 11.9 112 330-450 34-163 (301)
412 4e4u_A Mandalate racemase/muco 88.9 3.4 0.00012 43.2 12.6 118 329-460 146-283 (412)
413 2ehh_A DHDPS, dihydrodipicolin 88.8 3.1 0.00011 41.3 11.8 69 330-398 22-101 (294)
414 2b7n_A Probable nicotinate-nuc 88.8 1 3.5E-05 44.4 8.0 64 333-398 193-256 (273)
415 1l6w_A Fructose-6-phosphate al 88.7 1.4 4.9E-05 41.8 8.7 121 330-462 67-190 (220)
416 3hqn_D Pyruvate kinase, PK; TI 88.6 28 0.00095 37.0 22.2 265 137-459 33-331 (499)
417 2agk_A 1-(5-phosphoribosyl)-5- 88.6 0.24 8.1E-06 48.6 3.3 67 382-464 41-108 (260)
418 3cpr_A Dihydrodipicolinate syn 88.6 3.5 0.00012 41.1 12.0 69 330-398 38-117 (304)
419 3go2_A Putative L-alanine-DL-g 88.4 4.8 0.00016 42.0 13.4 115 329-459 145-292 (409)
420 1ypf_A GMP reductase; GUAC, pu 88.4 1.5 5.1E-05 44.6 9.2 65 69-136 14-80 (336)
421 2yxg_A DHDPS, dihydrodipicolin 88.4 3.2 0.00011 41.1 11.4 69 330-398 22-101 (289)
422 3b4u_A Dihydrodipicolinate syn 88.3 3.8 0.00013 40.7 12.0 168 269-461 26-214 (294)
423 1vs1_A 3-deoxy-7-phosphoheptul 88.3 4.6 0.00016 39.7 12.3 111 329-456 52-176 (276)
424 2yci_X 5-methyltetrahydrofolat 88.2 2.8 9.6E-05 41.2 10.7 66 329-396 34-104 (271)
425 3l21_A DHDPS, dihydrodipicolin 88.2 3.3 0.00011 41.3 11.5 112 330-450 37-166 (304)
426 3eoo_A Methylisocitrate lyase; 88.1 2.8 9.5E-05 41.7 10.7 96 361-458 13-117 (298)
427 2r8w_A AGR_C_1641P; APC7498, d 88.1 2.9 0.0001 42.3 11.1 112 330-450 56-185 (332)
428 4e5t_A Mandelate racemase / mu 88.1 3.6 0.00012 42.9 12.1 120 329-462 153-292 (404)
429 2o56_A Putative mandelate race 88.0 3.8 0.00013 42.6 12.4 117 330-460 155-297 (407)
430 1vpx_A Protein (transaldolase 88.0 1.5 5.1E-05 41.9 8.3 121 330-462 77-200 (230)
431 3eez_A Putative mandelate race 87.8 4.8 0.00017 41.4 12.9 116 329-462 147-270 (378)
432 3my9_A Muconate cycloisomerase 87.8 3.7 0.00013 42.3 12.0 117 330-460 149-273 (377)
433 3sjn_A Mandelate racemase/muco 87.8 7.2 0.00025 40.0 14.1 118 329-460 148-276 (374)
434 3flu_A DHDPS, dihydrodipicolin 87.8 4.1 0.00014 40.5 11.9 112 330-450 29-158 (297)
435 3dz1_A Dihydrodipicolinate syn 87.7 2.8 9.4E-05 42.1 10.6 69 330-398 30-108 (313)
436 2gl5_A Putative dehydratase pr 87.7 4.6 0.00016 42.0 12.8 117 330-460 153-300 (410)
437 3ih1_A Methylisocitrate lyase; 87.5 2.5 8.6E-05 42.2 10.0 94 360-458 19-123 (305)
438 3rr1_A GALD, putative D-galact 87.5 4.8 0.00016 41.9 12.6 118 329-460 127-260 (405)
439 2vp8_A Dihydropteroate synthas 87.4 3.6 0.00012 41.3 11.1 67 329-396 65-141 (318)
440 2qq6_A Mandelate racemase/muco 87.4 6.9 0.00024 40.7 13.9 115 330-458 152-290 (410)
441 2htm_A Thiazole biosynthesis p 87.3 2.3 7.9E-05 41.3 9.2 66 333-398 136-206 (268)
442 3sr7_A Isopentenyl-diphosphate 87.3 1.2 3.9E-05 45.9 7.6 91 367-461 140-239 (365)
443 3mqt_A Mandelate racemase/muco 87.3 4.3 0.00015 42.1 12.1 117 332-462 157-285 (394)
444 1a3w_A Pyruvate kinase; allost 87.2 34 0.0012 36.4 21.8 120 330-460 194-333 (500)
445 3ndo_A Deoxyribose-phosphate a 87.1 2.9 9.9E-05 40.0 9.7 123 330-462 30-169 (231)
446 2ox4_A Putative mandelate race 87.0 4.1 0.00014 42.2 11.9 116 330-459 149-290 (403)
447 3si9_A DHDPS, dihydrodipicolin 87.0 3.5 0.00012 41.4 10.9 69 330-398 44-123 (315)
448 2poz_A Putative dehydratase; o 87.0 2.9 9.8E-05 43.3 10.6 117 330-460 140-281 (392)
449 2h9a_B CO dehydrogenase/acetyl 86.9 1.5 5.2E-05 43.9 8.0 64 330-394 75-149 (310)
450 3fok_A Uncharacterized protein 86.9 4.3 0.00015 40.3 11.0 116 335-469 134-284 (307)
451 3tr9_A Dihydropteroate synthas 86.9 3.1 0.00011 41.6 10.2 66 329-396 49-129 (314)
452 4dye_A Isomerase; enolase fami 86.9 11 0.00036 39.1 14.9 114 330-460 171-292 (398)
453 2hxt_A L-fuconate dehydratase; 86.8 8.4 0.00029 40.5 14.3 118 330-461 201-326 (441)
454 1jub_A Dihydroorotate dehydrog 86.8 1.3 4.5E-05 44.3 7.6 68 331-398 174-270 (311)
455 1z41_A YQJM, probable NADH-dep 86.8 1.8 6E-05 44.1 8.6 68 330-398 230-306 (338)
456 1s2w_A Phosphoenolpyruvate pho 86.7 2.7 9.1E-05 41.8 9.7 93 361-458 10-113 (295)
457 1zlp_A PSR132, petal death pro 86.7 3.9 0.00013 41.0 10.9 92 362-458 31-135 (318)
458 3qze_A DHDPS, dihydrodipicolin 86.6 3.8 0.00013 41.1 10.9 112 330-450 45-174 (314)
459 1o5k_A DHDPS, dihydrodipicolin 86.6 3.6 0.00012 41.2 10.6 69 330-398 34-113 (306)
460 2vef_A Dihydropteroate synthas 86.5 2.7 9.3E-05 42.2 9.7 66 329-396 33-109 (314)
461 2ps2_A Putative mandelate race 86.5 4.9 0.00017 41.2 12.0 113 329-459 148-269 (371)
462 3q45_A Mandelate racemase/muco 86.5 11 0.00039 38.4 14.7 120 328-462 141-268 (368)
463 3p3b_A Mandelate racemase/muco 86.4 2.5 8.5E-05 43.9 9.7 117 330-459 151-285 (392)
464 2jbm_A Nicotinate-nucleotide p 86.4 1.3 4.5E-05 44.2 7.3 64 333-398 208-271 (299)
465 3tak_A DHDPS, dihydrodipicolin 86.4 4.2 0.00014 40.3 11.0 69 330-398 23-102 (291)
466 3b4u_A Dihydrodipicolinate syn 86.4 4.8 0.00017 39.9 11.5 113 330-450 25-158 (294)
467 3mkc_A Racemase; metabolic pro 86.4 6.8 0.00023 40.5 13.1 116 332-461 162-289 (394)
468 2ojp_A DHDPS, dihydrodipicolin 86.3 3.5 0.00012 40.9 10.4 112 330-450 23-152 (292)
469 3na8_A Putative dihydrodipicol 86.3 3.3 0.00011 41.6 10.2 69 330-398 46-125 (315)
470 2e6f_A Dihydroorotate dehydrog 86.3 1.1 3.7E-05 45.0 6.7 69 330-398 175-272 (314)
471 3sbf_A Mandelate racemase / mu 86.3 6.5 0.00022 40.8 12.9 120 329-462 135-285 (401)
472 3bw2_A 2-nitropropane dioxygen 86.2 2.3 7.9E-05 43.7 9.3 65 333-398 156-236 (369)
473 2v9d_A YAGE; dihydrodipicolini 86.2 3.8 0.00013 41.7 10.8 69 330-398 53-132 (343)
474 2wkj_A N-acetylneuraminate lya 86.2 4.2 0.00014 40.5 10.9 69 330-398 33-112 (303)
475 3vk5_A MOEO5; TIM barrel, tran 86.2 2.5 8.5E-05 41.5 8.8 60 337-398 194-255 (286)
476 3tji_A Mandelate racemase/muco 86.1 5.1 0.00018 41.9 12.1 118 329-460 156-304 (422)
477 1ep3_A Dihydroorotate dehydrog 86.0 1.3 4.6E-05 44.1 7.2 67 331-398 178-269 (311)
478 3vav_A 3-methyl-2-oxobutanoate 85.9 6.9 0.00024 38.3 11.9 95 359-457 18-124 (275)
479 3bjs_A Mandelate racemase/muco 85.8 5.6 0.00019 41.7 12.2 116 329-459 187-311 (428)
480 1xg4_A Probable methylisocitra 85.7 5.3 0.00018 39.7 11.2 94 361-458 8-113 (295)
481 3s5o_A 4-hydroxy-2-oxoglutarat 85.7 4.1 0.00014 40.7 10.6 69 330-398 36-115 (307)
482 3fs2_A 2-dehydro-3-deoxyphosph 85.6 3.5 0.00012 40.9 9.7 114 332-458 122-259 (298)
483 1qpo_A Quinolinate acid phosph 85.5 2.3 7.9E-05 42.0 8.4 65 332-398 204-268 (284)
484 1nsj_A PRAI, phosphoribosyl an 85.5 4.4 0.00015 37.9 10.1 115 331-462 65-183 (205)
485 1p0k_A Isopentenyl-diphosphate 85.5 2.7 9.1E-05 42.8 9.3 66 333-398 193-279 (349)
486 2rfg_A Dihydrodipicolinate syn 85.4 3.3 0.00011 41.2 9.7 112 330-450 22-151 (297)
487 3hgj_A Chromate reductase; TIM 85.4 2.1 7.3E-05 43.6 8.5 67 330-397 240-316 (349)
488 2qiw_A PEP phosphonomutase; st 85.4 4.8 0.00017 39.1 10.5 92 362-458 12-112 (255)
489 3fkr_A L-2-keto-3-deoxyarabona 85.3 3.8 0.00013 41.0 10.2 69 330-398 30-109 (309)
490 4dbe_A Orotidine 5'-phosphate 85.3 3.7 0.00012 39.0 9.5 68 382-465 125-193 (222)
491 1vcf_A Isopentenyl-diphosphate 85.2 1.7 5.7E-05 44.1 7.5 66 333-398 196-284 (332)
492 3b8i_A PA4872 oxaloacetate dec 85.0 4.2 0.00015 40.2 10.1 92 362-458 13-116 (287)
493 3bo9_A Putative nitroalkan dio 85.0 2 7E-05 43.3 8.0 65 333-398 135-204 (326)
494 3ve9_A Orotidine-5'-phosphate 85.0 0.69 2.4E-05 43.9 4.2 67 383-465 119-186 (215)
495 2vc6_A MOSA, dihydrodipicolina 84.9 3.8 0.00013 40.6 9.8 98 329-435 21-131 (292)
496 1dbt_A Orotidine 5'-phosphate 84.9 1.8 6E-05 41.7 7.2 143 319-464 57-219 (239)
497 3daq_A DHDPS, dihydrodipicolin 84.9 4 0.00014 40.4 10.0 69 330-398 24-103 (292)
498 1o4u_A Type II quinolic acid p 84.9 1.3 4.3E-05 43.9 6.2 65 332-398 203-267 (285)
499 3ddm_A Putative mandelate race 84.8 8 0.00027 40.0 12.7 116 329-459 157-281 (392)
500 1chr_A Chloromuconate cycloiso 84.8 11 0.00036 38.7 13.5 116 333-462 148-272 (370)
No 1
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=100.00 E-value=5.9e-101 Score=813.04 Aligned_cols=477 Identities=50% Similarity=0.787 Sum_probs=330.5
Q ss_pred EEEeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHH
Q psy1056 67 GIVTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLL 145 (590)
Q Consensus 67 GivT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l 145 (590)
+-+||+ |+++.|+++++ |+++++++++++++.+++|+++++||||++..|+++|++.||+||||+|++
T Consensus 58 ~GLTfD--DVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVTe~~MAIamAr~GGiGvIH~n~s--------- 126 (556)
T 4af0_A 58 GGLTYN--DFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHHNCS--------- 126 (556)
T ss_dssp CSCCGG--GEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSC---------
T ss_pred CCCChh--hEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCcccccCHHHHHHHHHCCCeEEEcCCCC---------
Confidence 459999 99999999999 889999999999999999999999999999999999999999999999998
Q ss_pred HHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc--hHHHHHHHHHhccccccccccccCceeeEEeeCCC
Q psy1056 146 SQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT--TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGK 223 (590)
Q Consensus 146 ~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~--~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~ 223 (590)
.+.|.++++++|+ +... ++.+|++. +.|+.++.++| .+++++.+||++++.
T Consensus 127 ----------------ie~Qa~~V~~VKr-~e~g-~i~dPvtl~P~~Tv~da~~l~---------~~~~isgvpVvd~g~ 179 (556)
T 4af0_A 127 ----------------AEEQAAMVRRVKK-YENG-FITDPLCLGPDATVGDVLEIK---------AKFGFCGVPITETGE 179 (556)
T ss_dssp ----------------HHHHHHHHHHHHH-CCC-----------------------------------------------
T ss_pred ----------------HHHHHHHHHHHHh-cccC-ccCCCeEcCCCCCHHHHHHHH---------HHhCCCccccccccC
Confidence 9999999999998 7776 77777777 99999999999 999999999999866
Q ss_pred CCCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccc
Q psy1056 224 LGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLK 303 (590)
Q Consensus 224 ~~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll 303 (590)
.+++|+||||.+|++|.. .+.+|+++|++ +++|++++.++++|.++|.++++..|||||++|+|+|+||++|++
T Consensus 180 ~~~kLvGIvT~RD~rf~d----~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~ 253 (556)
T 4af0_A 180 PDSKLLGIVTGRDVQFQD----AETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLL 253 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCEEEEEEecccccccc----cceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhh
Confidence 668999999999999842 35899999999 999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCc-ccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCc
Q psy1056 304 KSRDYPDSSK-DENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFG 382 (590)
Q Consensus 304 ~~~~~~~~~~-d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~ 382 (590)
+...|+++.+ |..++++++++++...+..+++..|+++|+|+++||+++|+..++++.++++++.+|+++||+|||.|+
T Consensus 254 k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~ 333 (556)
T 4af0_A 254 KNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTR 333 (556)
T ss_dssp ----CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSH
T ss_pred hhhhCCcchhcchhhceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCH
Confidence 9999999876 788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEE
Q psy1056 383 YQPRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTA 456 (590)
Q Consensus 383 ~~a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v 456 (590)
+.|+.|+++|||+|+| ++|+||. .+|.|+ |++++.+|++++.+.++||||||||++++||+||||+|||+|
T Consensus 334 e~a~~Li~aGAD~vkVGiGpGSiCtTr~---v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~V 410 (556)
T 4af0_A 334 EQAAQLIAAGADGLRIGMGSGSICITQE---VMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAV 410 (556)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTBCCTT---TCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEeecCCCCccccccc---ccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEE
Confidence 9999999999999999 9999999 999999 999999999999999999999999999999999999999999
Q ss_pred EECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccC-----------CCcccchhhhccccceeecccceeEEee
Q psy1056 457 MMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDG-----------GAAAMDRYFHNEMDKLKVAQGVSGAIVD 525 (590)
Q Consensus 457 ~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~-----------~~~~~~~~~~~~~~~~~~~eg~~~~~~~ 525 (590)
|+|++|++|+||||++++.+|++||.||||||.+||.+... ..+++.+|||++..+.++|||+|+.|||
T Consensus 411 MlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~dRyfq~~~~~~v~EGveg~Vpy 490 (556)
T 4af0_A 411 MMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVAD 490 (556)
T ss_dssp EESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSSEEECCCBSSSSCBCCBCEEEEEC
T ss_pred EEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccchhhhcccccccccCCccEEeccC
Confidence 99999999999999999999999999999999999975321 1246788999998888999999999999
Q ss_pred CCchhchHHHHHhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccccccccC
Q psy1056 526 KGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRLF 590 (590)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~~~~~ 590 (590)
||+|.++|++|.++||++|+|+||+||+|||++.++|+++|+++|++|++|||||||+||+||||
T Consensus 491 kG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~a~~g~~rf~~iT~ag~~Es~~Hdv~s~~K~l~ 555 (556)
T 4af0_A 491 KGSINKFVPYLFTGLQHSLQDAAIKSVSELHSCARSGSLRFELRTASAQLEGGVHGLNSYTKRLF 555 (556)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHTCSCEEECCCC------------------
T ss_pred CCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHhhhccCceEEEEChhhhhhcCCCccceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999998
No 2
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=100.00 E-value=7.7e-81 Score=679.07 Aligned_cols=457 Identities=33% Similarity=0.503 Sum_probs=411.7
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+|++ |+++.|+++++ |+++++++++++.+.++.|+++++|++++++.|++++++.||+|++|+|.+
T Consensus 11 ~t~~--d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVTe~~ma~a~a~~GGiGvI~~n~s----------- 77 (496)
T 4fxs_A 11 LTFD--DVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMS----------- 77 (496)
T ss_dssp CCGG--GEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHHTCEEEECSSSC-----------
T ss_pred cCcc--cEEEecCccccccccccccceeccccccCCCceecCcchhhHHHHHHHHHHcCCcceecCCCC-----------
Confidence 7999 99999999999 889999999999999999999999999999999999999999999999987
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCC
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKL 224 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~ 224 (590)
.+.+.+++++++. +.. +|..++.+ ++++.++++.| .+++++++||+|+
T Consensus 78 --------------~e~qa~~V~~Vk~-~~~--~m~~d~v~v~~~~tv~ea~~~m---------~~~~~s~~PVvd~--- 128 (496)
T 4fxs_A 78 --------------IEQQAAQVHQVKI-FEA--GVVTHPVTVRPEQTIADVMELT---------HYHGFAGFPVVTE--- 128 (496)
T ss_dssp --------------HHHHHHHHHHHHH-CCC----CBCCCCBCSSSBHHHHHHHH---------TSSCCCEEEEECS---
T ss_pred --------------HHHHHHHHHhccc-ccc--ccccCceEECCCCCHHHHHHHH---------HHcCCcEEEEEcc---
Confidence 7777888888876 443 56555555 99999999999 9999999999998
Q ss_pred CCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 225 GEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 225 ~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
+++++||||.+|+++... ...+++++|++.++++++++++++.+++++|.+++++.+||+|++|+++|+||.+|+++
T Consensus 129 ~~~lvGiVt~rDL~~~~~---~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~ 205 (496)
T 4fxs_A 129 NNELVGIITGRDVRFVTD---LTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHK 205 (496)
T ss_dssp SSBEEEEEEHHHHTTCCC---TTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC----
T ss_pred CCEEEEEEEHHHHhhccc---CCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHH
Confidence 699999999999986543 35889999993234899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHH
Q psy1056 305 SRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384 (590)
Q Consensus 305 ~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~ 384 (590)
...++...++..+++++++.++...+..+.++.++++|+++++++.++|+...+.+.++++++.+|++|+++|++.+.+.
T Consensus 206 ~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~ 285 (496)
T 4fxs_A 206 AESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEG 285 (496)
T ss_dssp -CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHH
T ss_pred hhcccchhhhcccceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHH
Confidence 99999988889999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 385 PRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 385 a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
|+.|.++|||+|.| +.|+++. .++||. +.+++.++.++++..++|||++|||+++.|++||+++|||+||+
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~---~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRI---VTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMV 362 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHH---HHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEECCCCCcCccccc---ccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEe
Confidence 99999999999998 4788888 889998 99999999988877789999999999999999999999999999
Q ss_pred CccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccc--cceeecccceeEEeeCCchhchHHHH
Q psy1056 459 GSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM--DKLKVAQGVSGAIVDKGSVLRFLPYL 536 (590)
Q Consensus 459 g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~--~~~~~~eg~~~~~~~~~~~~~~~~~~ 536 (590)
|++|++|+||||++++++|++||.||||||++||.+ |+.+|||++. .+.++|||+++.|||||++.++|++|
T Consensus 363 Gs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~------~~~~r~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~ 436 (496)
T 4fxs_A 363 GSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSK------GSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQ 436 (496)
T ss_dssp STTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHS------SSCCSTTTC---CCCCCCSBCEEEEECCBCHHHHHHHH
T ss_pred cHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhc------cccccccccccccccccCCccEEeCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999974 7889999864 35789999999999999999999999
Q ss_pred HhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccc
Q psy1056 537 QCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584 (590)
Q Consensus 537 ~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~ 584 (590)
.++||++|+|+||+||+|||++ ++|+++|++|++||||||+..
T Consensus 437 ~~~l~~~~~~~g~~~i~~l~~~-----~~~~~~~~~~~~e~~~h~~~~ 479 (496)
T 4fxs_A 437 MGGLRSCMGLTGSATVEDLRTK-----AQFVRISGAGMKESHVHDVQI 479 (496)
T ss_dssp HHHHHHHHHHHTCSBHHHHHHH-----CCEEECCHHHHHHHSCCSSCC
T ss_pred HHHHHHHHHhcCcCcHHHHHhC-----CeEEEEccchhhccCCCcccc
Confidence 9999999999999999999998 899999999999999999873
No 3
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-79 Score=667.22 Aligned_cols=458 Identities=34% Similarity=0.488 Sum_probs=282.9
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+||+ |+++.|+++++ |+++++++++++.+.++.|+++++|+++++..|++++++.||+|++|++.+
T Consensus 10 ~t~~--d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVTe~~lA~ala~~GGiGvI~~~~~----------- 76 (490)
T 4avf_A 10 LTFD--DVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMG----------- 76 (490)
T ss_dssp CCGG--GEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTCSHHHHHHHHHHTSEEEECCSSC-----------
T ss_pred CCcc--eEEEeCCCCcccccceeeecccccCcccCCCccccchhhhCHHHHHHHHHHcCCCccccCCCC-----------
Confidence 7999 99999999999 889999999999999999999999999999999999999999999999887
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCC
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKL 224 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~ 224 (590)
.+.+.+++++++. +.. +|..++.+ ++++.++++.| .+++++++||+|+
T Consensus 77 --------------~e~~a~~v~~vk~-~~~--~m~~~~v~v~~~~tv~ea~~~m---------~~~~~s~~pVvd~--- 127 (490)
T 4avf_A 77 --------------IEQQAAEVRKVKK-HET--AIVRDPVTVTPSTKIIELLQMA---------REYGFSGFPVVEQ--- 127 (490)
T ss_dssp --------------HHHHHHHHHHHHH-CCC-------------------------------------------------
T ss_pred --------------HHHHHHHhhhhcc-ccc--CcccCceEeCCCCcHHHHHHHH---------HHhCCCEEEEEEC---
Confidence 6677777777776 443 56555544 99999999999 9999999999995
Q ss_pred CCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 225 GEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 225 ~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
++++||||.+|+++... ...+|+++|+++.+++++++++++.+++++|.+++++.+||+|++|+++|+||.+|+++
T Consensus 128 -g~lvGIVt~rDl~~~~~---~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~ 203 (490)
T 4avf_A 128 -GELVGIVTGRDLRVKPN---AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEK 203 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CEEEEEEEhHHhhhccc---cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhh
Confidence 89999999999986543 35889999994235899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHH
Q psy1056 305 SRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384 (590)
Q Consensus 305 ~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~ 384 (590)
...++...++..+++++++.++...+..+.++.++++|+++++++.++|+...+.+.++++++.+|++|+++|++.+.+.
T Consensus 204 ~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~ 283 (490)
T 4avf_A 204 AKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEA 283 (490)
T ss_dssp ---CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHH
T ss_pred hccCcchhhhccCcceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHH
Confidence 99999998899999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 385 PRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 385 a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
|+.|.++|||+|.| ++|+++. ..+||. +.+++.++.++++..++|||++|||+++.|++|||++|||+||+
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~---~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRI---VAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHH---HTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccc---cCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeee
Confidence 99999999999998 5788887 888999 99999999988877789999999999999999999999999999
Q ss_pred CccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhcccc---ceeecccceeEEeeCCchhchHHH
Q psy1056 459 GSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMD---KLKVAQGVSGAIVDKGSVLRFLPY 535 (590)
Q Consensus 459 g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~---~~~~~eg~~~~~~~~~~~~~~~~~ 535 (590)
|++|++++|||+++++++|++||.||||||++||.+ .+|+.+|||++.. +++++||+++.|||||++.++|++
T Consensus 361 Gs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~----~~~~~~r~~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~ 436 (490)
T 4avf_A 361 GSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSG----SQGSSDRYFQDASAGAEKLVPEGIEGRVPYKGALSAIVHQ 436 (490)
T ss_dssp CTTTTTBTTSSSCEEEETTEEEEC-------------------------------------------CBCCBCHHHHHHH
T ss_pred cHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhh----cccccchhhcccccccccccCCCcEEcCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999953 1578999998653 478999999999999999999999
Q ss_pred HHhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccc
Q psy1056 536 LQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584 (590)
Q Consensus 536 ~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~ 584 (590)
|.++||++|+|+||+||+|||++ ++|+++|++|++||||||+..
T Consensus 437 ~~~~lr~~~~~~g~~~i~~l~~~-----~~~~~~~~~~~~e~~~h~~~~ 480 (490)
T 4avf_A 437 LMGGLRAAMGYTGSADIQQMRTQ-----PQFVRITGAGMAESHVHDVQI 480 (490)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHS-----CCEEEECCC------------
T ss_pred HHHHHHHHHHhcCcCcHHHHHhC-----CEEEEEccchhhcCCCCcccc
Confidence 99999999999999999999998 899999999999999999873
No 4
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=100.00 E-value=4.7e-77 Score=651.46 Aligned_cols=458 Identities=34% Similarity=0.505 Sum_probs=385.4
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+|++ |+++.|+++++ |+++++++++++.+.++.|+++++|+++++..|++++++.||+|++|++.+
T Consensus 35 ~t~~--d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvTe~~lAia~a~~GgiGvIh~~~~----------- 101 (511)
T 3usb_A 35 LTFD--DVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVTEADMAIAMARQGGLGIIHKNMS----------- 101 (511)
T ss_dssp CCGG--GEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTCSHHHHHHHHHHTCEEEECSSSC-----------
T ss_pred cceE--EEEEECCcccccccceEeeeEeecccccCCCccccCchhhcHHHHHHHHHhcCCceeecccCC-----------
Confidence 8999 99999999998 889999999999999999999999999999999999999999999999887
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCC
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKL 224 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~ 224 (590)
.+.+.+++++++. ... +|..++.+ ++++.++++.| .+++++++||+|++ .
T Consensus 102 --------------~~~q~~~V~~V~~-~~~--~m~~d~v~l~~~~tv~ea~~~m---------~~~~~s~~pVvd~g-~ 154 (511)
T 3usb_A 102 --------------IEQQAEQVDKVKR-SES--GVISDPFFLTPEHQVYDAEHLM---------GKYRISGVPVVNNL-D 154 (511)
T ss_dssp --------------HHHHHHHHHHHHT-SSS--CSSSSCCCBCTTSBHHHHHHHH---------HHHCCSEEEEESCT-T
T ss_pred --------------HHHHHHHHHHhhc-ccc--ccccCCEEECCCCCHHHHHHHH---------HHcCCcEEEEEecC-C
Confidence 6677777888876 433 45444444 99999999999 99999999999851 1
Q ss_pred CCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 225 GEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 225 ~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
+++++|+||.+|+++... ...+|+++|++ .+++++++++++.+++++|.+++++.+||+|++|+++|+||.+|+++
T Consensus 155 ~~~lvGiVt~rDl~~~~~---~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~ 230 (511)
T 3usb_A 155 ERKLVGIITNRDMRFIQD---YSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEK 230 (511)
T ss_dssp TCBEEEEEEHHHHTTCCC---SSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred CCEEEEEEEehHhhhhcc---CCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHH
Confidence 389999999999987432 45899999995 47899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHH
Q psy1056 305 SRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384 (590)
Q Consensus 305 ~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~ 384 (590)
...++...++..+++++++.++...+..+++..++++|+++++++.++|+..++++.++++++.+|++|+++|+|.+.+.
T Consensus 231 ~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~ 310 (511)
T 3usb_A 231 VIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEA 310 (511)
T ss_dssp HHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHH
T ss_pred hhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHH
Confidence 99998888888899999999998888899999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 385 PRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 385 a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
|+.|.++|+|+|+| ++|+++. .+|||. +.+++.++++++...++||||+|||+++.|++|||++||++||+
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~---~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~v 387 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRV---VAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVML 387 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHH---HHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEECCCCcccccccc---ccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhhee
Confidence 99999999999998 7788888 889999 99999999988887789999999999999999999999999999
Q ss_pred CccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHh
Q psy1056 459 GSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQC 538 (590)
Q Consensus 459 g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~ 538 (590)
|++|++++||||++++++|+.||.||||||.+||.+ |+.+|||++..+.++|||+++.+||+|++.++|++|.+
T Consensus 388 Gs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~------~~~~r~~~~~~~~~~~eG~~~~~~~~~~~~~~~~~~~~ 461 (511)
T 3usb_A 388 GSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEK------GSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVG 461 (511)
T ss_dssp STTTTTBTTSSSCEEECSSSEEEC----------------------------------------CBCCBCHHHHHHHHHH
T ss_pred cHHHhcCccCchhhhhccCeeeeeeeccccHHHHhc------ccccchhccccccccCCCcEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999974 78999999877788999999999999999999999999
Q ss_pred hhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccc
Q psy1056 539 GLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584 (590)
Q Consensus 539 ~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~ 584 (590)
+||++|+|+||++|+|||++ ++|+++|++|++||||||+..
T Consensus 462 ~lr~~m~~~G~~~i~~l~~~-----~~~~~~~~~~~~e~~~h~~~~ 502 (511)
T 3usb_A 462 GLRAGMGYCGAQDLEFLREN-----AQFIRMSGAGLLESHPHHVQI 502 (511)
T ss_dssp HHHHHHHHTTCSBHHHHHHH-----CCEEECCHHHHC---------
T ss_pred HHHHHHHhcCcccHHHHHhC-----CeEEEEcccccccCCCCCCCc
Confidence 99999999999999999998 999999999999999999874
No 5
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=100.00 E-value=3e-73 Score=622.41 Aligned_cols=458 Identities=28% Similarity=0.361 Sum_probs=299.0
Q ss_pred EeccccccccCCCCCC--C-CccCCccccccc-------ccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcch
Q psy1056 69 VTSRDVDFLENSANMD--L-KIEKDLSSPLTK-------KITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREAD 138 (590)
Q Consensus 69 vT~~Did~l~~~~~~~--~-~~~~~~~~~l~~-------~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~ 138 (590)
+|++ |+++.|++++ + |+++++++++++ .+.+..|+++++|++++++.++++++..|++|++|++.+
T Consensus 10 ~t~~--d~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~~vt~~~la~~la~~gg~G~I~~~~~-- 85 (503)
T 1me8_A 10 HTFN--EYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFGSQS-- 85 (503)
T ss_dssp CCGG--GEEECCCCCCTTCCGGGCBCCEECSCEETTCCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEECCSSC--
T ss_pred cccc--cEEEcCCCCCCccCCCcceeeeeccccccccccceeecCceEeccchhhhHHHHHHHHHhCCCcceeeCCCC--
Confidence 8999 9999999999 7 899999999998 899999999999999999999999999999999999876
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCcee
Q psy1056 139 KYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCG 215 (590)
Q Consensus 139 ~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~ 215 (590)
.+.+.+.+.+++. +.. .|..++.+ ++++.++++.| .++++++
T Consensus 86 -----------------------~e~~~~~v~~V~~-~e~--gM~~~~~~v~~~~tv~eal~~m---------~~~~~s~ 130 (503)
T 1me8_A 86 -----------------------IESQAAMVHAVKN-FKA--GFVVSDSNVKPDQTFADVLAIS---------QRTTHNT 130 (503)
T ss_dssp -----------------------HHHHHHHHHHHHT-TTC----------------------------------------
T ss_pred -----------------------HHHHHHHHhhhhh-ccc--CcccCCeEECCCCcHHHHHHHH---------HHcCceE
Confidence 5666667777776 321 16665555 99999999999 9999999
Q ss_pred eEEeeCCCCC---CeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCc
Q psy1056 216 FPVTENGKLG---EKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGE 292 (590)
Q Consensus 216 ~pVvd~~~~~---~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~ 292 (590)
+||+|+ + ++++|+||.+|+++. ......+|+++|++..+++++++++++.+|+++|.+++++.+||+|++|+
T Consensus 131 ~pVvd~---~~~~g~lvGiVt~~Dl~~~--~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~ 205 (503)
T 1me8_A 131 VAVTDD---GTPHGVLLGLVTQRDYPID--LTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQH 205 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEC---CCcCCeEEEEEEHHHHHhh--hccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCe
Confidence 999997 5 799999999999863 12346889999998222999999999999999999999999999999999
Q ss_pred eEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCC-
Q psy1056 293 LIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPD- 371 (590)
Q Consensus 293 l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~- 371 (590)
++|+||.+||++...+.....+..+++.+++.++. .+..+.++.+.+.|++++.++.++|+..++.+.++++++.+|+
T Consensus 206 lvGiIT~~Dil~~~~~~~~~~d~~~~l~v~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~ 284 (503)
T 1me8_A 206 LRYIVFRKDYDRSQVCHNELVDSQKRYLVGAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDK 284 (503)
T ss_dssp ----------------CCCCBCTTSCBCCEEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGG
T ss_pred EEEEEEecHHHHhhhcccchhccccccccccccCc-hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCC
Confidence 99999999999998877766677778777777776 5667788999999999999999999998899999999999887
Q ss_pred ceEEeccccCcHHHHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcC------CCcEEecCCC
Q psy1056 372 MQVIGGNVLFGYQPRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRR------GVPVIADGGV 439 (590)
Q Consensus 372 vpvi~g~v~s~~~a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~------~v~iia~GGi 439 (590)
+|+++|++.+.++|+.|+++|+|+|+| ++|++|. +.+||. +++++.++++++... ++|||+||||
T Consensus 285 ~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~---~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi 361 (503)
T 1me8_A 285 VKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITRE---QKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGI 361 (503)
T ss_dssp SCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTT---TTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCC
T ss_pred ceEeeccccCHHHHHHHHHhCCCeEEecccCCcCccccc---ccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCC
Confidence 999999999999999999999999998 4477888 899999 999999998887654 6999999999
Q ss_pred CCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhh-hccccceeeccc
Q psy1056 440 QSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYF-HNEMDKLKVAQG 518 (590)
Q Consensus 440 ~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~-~~~~~~~~~~eg 518 (590)
++|.|++|||+|||++||+|++|++++|||++.++.+|+.||.||||||.+||.. +|| |++..+.+++||
T Consensus 362 ~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~---------~~~~~~~~~~~~~~eg 432 (503)
T 1me8_A 362 VYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNW---------QRYDLGGKQKLSFEEG 432 (503)
T ss_dssp CSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC-----------------------CC
T ss_pred CCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhc---------cccccccccceecccc
Confidence 9999999999999999999999999999999999999999999999999999852 566 654456789999
Q ss_pred ceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccccccc
Q psy1056 519 VSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKR 588 (590)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~~~ 588 (590)
+++.+||||++.++|++|.++||++|+|+||+||+||+++ ++|+++|++|++||||||++++.+.
T Consensus 433 ~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~ 497 (503)
T 1me8_A 433 VDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSK-----AKITLVSSVSIVEGGAHDVIVKDRI 497 (503)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH-----CCEEECCTTCSTTTSCCSCC-----
T ss_pred eeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhC-----CCEEEEcccccccCCCccceeeccC
Confidence 9999999999999999999999999999999999999998 8999999999999999999987654
No 6
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=100.00 E-value=3.7e-69 Score=593.44 Aligned_cols=476 Identities=59% Similarity=0.902 Sum_probs=329.9
Q ss_pred EEeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHH
Q psy1056 68 IVTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLS 146 (590)
Q Consensus 68 ivT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~ 146 (590)
-+|++ |+++.|.++.+ |..+++.+.+++.+.+..|+++++|+++++..++..++..|+.+++|.+.+
T Consensus 29 alt~d--dvlLmp~~s~~~p~~v~l~~eLt~~~~~~iP~vsa~md~~t~~~la~~ia~~gg~gii~~~~t---------- 96 (514)
T 1jcn_A 29 DLTYN--DFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCT---------- 96 (514)
T ss_dssp CCCGG--GEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSC----------
T ss_pred ccccC--cEEeccCccCCCcceeEEEeeccCCeeEeceEEEEehhhhhhhhHHHHHHhcCCeeEEecCCC----------
Confidence 37888 88888999998 888888899998899999999999999999999999999999999987655
Q ss_pred HcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCC
Q psy1056 147 QAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGK 223 (590)
Q Consensus 147 ~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~ 223 (590)
.+.+.+.+++++. .. ++|..++.+ ++++.++++.| .+++++.+||+|++.
T Consensus 97 ---------------~e~~~~~v~~v~~-~~--~im~~~~~~v~~~~tv~ea~~~m---------~~~~~~~~pVvd~~~ 149 (514)
T 1jcn_A 97 ---------------PEFQANEVRKVKN-FE--QGFITDPVVLSPSHTVGDVLEAK---------MRHGFSGIPITETGT 149 (514)
T ss_dssp ---------------HHHHHHHHHHHHT-CC--TTSCSSCCCCCC--------------------------CEESCC---
T ss_pred ---------------HHHHHHHHHhhhh-hh--hccccCCEEECCCCCHHHHHHHH---------HhcCCCEEEEEeCCC
Confidence 4555555666654 33 366555444 89999999999 999999999998611
Q ss_pred CCCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccc
Q psy1056 224 LGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLK 303 (590)
Q Consensus 224 ~~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll 303 (590)
.+++++|+||.+|+++... .....+++++|++..+++++++++++.+++++|.+++++.+||+|++|+++|+||++|++
T Consensus 150 ~~~~lvGiVt~~Dl~~~~~-~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll 228 (514)
T 1jcn_A 150 MGSKLVGIVTSRDIDFLAE-KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLK 228 (514)
T ss_dssp -----CCEECTTTTC-----------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCS
T ss_pred cCCEEEEEEEHHHHHhhhh-ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHH
Confidence 1279999999999986431 124578999998534689999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcH
Q psy1056 304 KSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGY 383 (590)
Q Consensus 304 ~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~ 383 (590)
+...++...++..+++.++++++......+.++.++++|+++++++.++|++....+.++++++.+|++|+++|++.+.+
T Consensus 229 ~~~~~~~~~~~~~~rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~ 308 (514)
T 1jcn_A 229 KNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAA 308 (514)
T ss_dssp SCCCCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHH
T ss_pred HHhhCcchhcccCCceeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHH
Confidence 99998887777778888888888777788899999999999999999999988888999999999988999999999999
Q ss_pred HHHHHHHCCCCEEEEc-----ccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEE
Q psy1056 384 QPRATLLNFIYQIEMI-----KFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAM 457 (590)
Q Consensus 384 ~a~~l~~~Gvd~i~v~-----~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~ 457 (590)
.|+.|.++|||+|+|+ .|+++. ..+||. +...+..+++.+...++|||++|||+++.|++||+++|||+|+
T Consensus 309 ~a~~l~~aGad~I~vg~~~G~~~~t~~---~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRVGMGCGSICITQE---VMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp HHHHHHHHTCSEEEECSSCSCCBTTBC---CCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEECCCCCccccccc---ccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 9999999999999983 345666 778898 8888888888887778999999999999999999999999999
Q ss_pred ECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHH
Q psy1056 458 MGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQ 537 (590)
Q Consensus 458 ~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~ 537 (590)
+|++|+++.|+|++..+++|++||.||||+|.+||... +|+.+|||++..+.+++||+++.+|++|++.++|++|.
T Consensus 386 iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~----~~~~~~~~~~~~~~~~~~gv~~~~~~~g~~~~~i~~l~ 461 (514)
T 1jcn_A 386 MGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKS----SSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLI 461 (514)
T ss_dssp ESTTTTTSTTSSCC------------------------------------------------------CCCHHHHHHHHH
T ss_pred ECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhc----cccchhhccccccceecccceecCCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999998741 25678999876667799999999999999999999999
Q ss_pred hhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccccccccC
Q psy1056 538 CGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRLF 590 (590)
Q Consensus 538 ~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~~~~~ 590 (590)
++||++|+|+||+||+||++++++|.++|+++|++|++||||||+++|+|++|
T Consensus 462 ~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 514 (514)
T 1jcn_A 462 AGIQHGCQDIGARSLSVLRSMMYSGELKFEKRTMSAQIEGGVHGLHSYEKRLY 514 (514)
T ss_dssp HHHHHHHHHHTCSBHHHHHHHHHTTCSCEEECCSSCCC---------------
T ss_pred HHHHHHHHhhCcccHHHHHhhcccCceEEEEechhhhhccCCceeEeeccCCC
Confidence 99999999999999999999999999999999999999999999999999987
No 7
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=100.00 E-value=2.7e-66 Score=566.27 Aligned_cols=452 Identities=32% Similarity=0.474 Sum_probs=301.5
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+|++ |+++.|+++++ ++++++.+.+++.+.+..|+++++|+++++..++.+++..||+|++|++.+
T Consensus 15 ~~~d--d~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~vt~~ela~ava~~GglG~i~~~~~----------- 81 (486)
T 2cu0_A 15 YTFD--DVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMG----------- 81 (486)
T ss_dssp CCGG--GEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSC-----------
T ss_pred cCcc--CEEEcCCcCCCCcceEEEEeeecCCcccccceEEccceeecHHHHHHHHHhcCCceeecCCCC-----------
Confidence 8999 89999999999 889999999999999999999999999999999999999999999998765
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCC
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKL 224 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~ 224 (590)
.+.+.+++.++++ +. ++|..++.+ ++++.++++.| .+++++++||+++
T Consensus 82 --------------~e~~~~~I~~v~~-~~--~~m~~~~~~v~~~~tv~ea~~~~---------~~~~~~~~pVvd~--- 132 (486)
T 2cu0_A 82 --------------IEEQVEQVKRVKR-AE--RLIVEDVITIAPDETVDFALFLM---------EKHGIDGLPVVED--- 132 (486)
T ss_dssp --------------HHHHHHHHHHHHT-CC--------------------------------------------------
T ss_pred --------------HHHHHHHHHhhcc-hh--hccccCceEECCCCCHHHHHHHH---------HHcCCcEEEEEEC---
Confidence 4555566666665 43 256666655 88999999999 9999999999986
Q ss_pred CCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 225 GEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 225 ~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
++++|+||.+|+++ . ...+++++|++ +++++++++++.+++++|.+++++.+||+|++|+++|+||.+|+++
T Consensus 133 -~~lvGivt~~Dl~~--~---~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~ 204 (486)
T 2cu0_A 133 -EKVVGIITKKDIAA--R---EGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVA 204 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CEEEEEEEHHHhcc--C---CCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHH
Confidence 89999999999986 1 35789999998 8999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHH
Q psy1056 305 SRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384 (590)
Q Consensus 305 ~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~ 384 (590)
...+.....+..+.+.+...++. .+ .+.+..+.+.|++.++++..+|++.++++.++++++.+ ++|+++|++.++++
T Consensus 205 ~~~~~~~~~~~~g~~~v~~~~~~-~~-~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~~-~vpvi~k~v~~~~~ 281 (486)
T 2cu0_A 205 RKKYKNAVRDENGELLVAAAVSP-FD-IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKV-DADFIVGNIANPKA 281 (486)
T ss_dssp --CCTTCCBCTTSCBCCEEEECT-TC-HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTC-CSEEEEEEECCHHH
T ss_pred hhhccccccccCCceeecceech-hh-HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHHh-CCccccCCcCCHHH
Confidence 98876555555666666666665 44 67788899999999999999999988999999999998 89999999999999
Q ss_pred HHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 385 PRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 385 a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
++.|. |+|+|+| ++|++|. +.+||. +.+++.++++.+...++|||++|||+++.|++|||++|||+|++
T Consensus 282 a~~l~--G~d~v~vg~g~g~~~~~r~---~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~~v~~ 356 (486)
T 2cu0_A 282 VDDLT--FADAVKVGIGPGSICTTRI---VAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVML 356 (486)
T ss_dssp HTTCT--TSSEEEECSSCSTTBCHHH---HTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHhh--CCCeEEEeeeeccceeeeE---EeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCCceee
Confidence 99988 9999998 7788888 899999 99999999888876789999999999999999999999999999
Q ss_pred CccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccc---cceeecccceeEEeeCCchhchHHH
Q psy1056 459 GSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM---DKLKVAQGVSGAIVDKGSVLRFLPY 535 (590)
Q Consensus 459 g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~---~~~~~~eg~~~~~~~~~~~~~~~~~ 535 (590)
|++|++++|||++.++.+|+.||.||||||.+||.+ |+.+|||+.. ...+++||+++.+||+|++.+++++
T Consensus 357 g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~------~~~~r~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 430 (486)
T 2cu0_A 357 GNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMK------GGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQ 430 (486)
T ss_dssp STTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------------CCCCSCSSCCBCEEEEECCBCHHHHHHH
T ss_pred ChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhc------ccccccccccccccccccccceEEeecccCCHHHHHHH
Confidence 999999999999999999999999999999999975 5788898721 2346899999999999999999999
Q ss_pred HHhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCccccccccc
Q psy1056 536 LQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRL 589 (590)
Q Consensus 536 ~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~~~~ 589 (590)
|.++||++|+|+||++++||++. ..|+++|++|++||||||+++++++.
T Consensus 431 l~~~lr~~m~~~G~~~~~~l~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~~ 479 (486)
T 2cu0_A 431 LVGGLKAGMGYVGARNIRELKEK-----GEFVIITHAGIKESHPHDIIITNEAP 479 (486)
T ss_dssp HHHHHHHHHHHTTCSBHHHHHHH-----CCEEECCHHHHHHHSCCSSCCSCCCC
T ss_pred HHHHHHHhcccCCcCCHHHHHhh-----CCEEEEcccccccCCCcccceeccCC
Confidence 99999999999999999999998 89999999999999999999887754
No 8
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=100.00 E-value=1.8e-65 Score=561.94 Aligned_cols=462 Identities=34% Similarity=0.496 Sum_probs=281.7
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+|+. |+++.|.++++ |.++++++.+++.+.+..|+++++|+++++..+++++++.||+|++|++.+
T Consensus 17 ~~~~--dvll~p~~s~~~p~~v~~~~eLt~~~~l~iP~is~~m~~v~~~~lA~al~~~GglG~i~~~~~----------- 83 (494)
T 1vrd_A 17 LTFD--DVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLT----------- 83 (494)
T ss_dssp CCGG--GEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSC-----------
T ss_pred cccc--cEEeccccccCCCCceEEEehhhCCCccCceeEecchHHHhHHHHHHHHHHcCCceEEecCCC-----------
Confidence 8899 88888999999 889999999998999999999999999999999999999999999998876
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCC
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKL 224 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~ 224 (590)
.+.+...+.++++ .. ++|..++.+ ++++.++++.| .+++++.+||+|+
T Consensus 84 --------------~e~~~~~v~~v~~-~~--~iM~~~~~~v~~~~tv~ea~~~m---------~~~~~~~~pVvd~--- 134 (494)
T 1vrd_A 84 --------------PDEQARQVSIVKK-TE--NGIIYDPITVTPDMTVKEAIDLM---------AEYKIGGLPVVDE--- 134 (494)
T ss_dssp --------------HHHHHHHHHHHHT-C---------------------------------------------------
T ss_pred --------------hHHHHHHHHhhhh-Hh--hcCccCCeEECCCCCHHHHHHHH---------HHcCceEEEEEcC---
Confidence 4445555666654 33 367766655 88999999999 9999999999997
Q ss_pred CCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 225 GEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 225 ~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
+++++|+||.+|+++... ...+++++|++..+++++++++++.+++++|.+++++.+||+|++|+++|+||..|+++
T Consensus 135 ~~~lvGivt~~Dl~~~~~---~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~ 211 (494)
T 1vrd_A 135 EGRLVGLLTNRDVRFEKN---LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMS 211 (494)
T ss_dssp -----------------------------------------------------------------------------CHH
T ss_pred CCEEEEEEEHHHHHhhcC---CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHh
Confidence 689999999999986432 35789999985447899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHH
Q psy1056 305 SRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384 (590)
Q Consensus 305 ~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~ 384 (590)
...++...++..+++.+++.++......+.+..++++|++.+.++..+|+.....+.++++++.+|++|+++|++.+.++
T Consensus 212 ~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~ 291 (494)
T 1vrd_A 212 VIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEG 291 (494)
T ss_dssp HHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHH
T ss_pred hhccccccccchhhhccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHH
Confidence 99888777777778888888887777888999999999999999999998888899999999999889999999999999
Q ss_pred HHHHHHCCCCEEEEcc-----cccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 385 PRATLLNFIYQIEMIK-----FIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 385 a~~l~~~Gvd~i~v~~-----~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
|+.|.++|+|+|.|+. |+++. +.+||. +..++.++++.+...++|||++|||+++.|++|||++|||+|++
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~---~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~i 368 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRV---VAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMV 368 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHH---HHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEcCCCCccccccc---cCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 9999999999998854 33455 677888 88888888887766689999999999999999999999999999
Q ss_pred CccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHh
Q psy1056 459 GSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQC 538 (590)
Q Consensus 459 g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~ 538 (590)
|++|+++.|||++.++++|..||.||||||..||.. |+.++||+...+.+++||+++.+|+++++.+++++|..
T Consensus 369 Gr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~------g~~~~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~l~~ 442 (494)
T 1vrd_A 369 GSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRS------GSADRYGQEGENKFVPEGIEGMVPYKGTVKDVVHQLVG 442 (494)
T ss_dssp SHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------------CBCCEECCBCHHHHHHHHHH
T ss_pred CHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhh------ccccchhhcccccccCCcceEccCcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999875 67889997544456899999999999999999999999
Q ss_pred hhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCccccccccc
Q psy1056 539 GLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRL 589 (590)
Q Consensus 539 ~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~~~~ 589 (590)
+||++|+++|+.++.||+.. ..|+++|.++++||||||+++++++.
T Consensus 443 ~l~~~~~~~G~~~~~~l~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~~ 488 (494)
T 1vrd_A 443 GLRSGMGYIGARTIKELQEK-----AVFVKITPAGVKESHPHDIIITKESP 488 (494)
T ss_dssp HHHHHHHHHTCSSHHHHHHH-----CCEEECC-------------------
T ss_pred HHHHHhhhcCCCCHHHHHhh-----CCEEEEcccccccCCCccceeeccCC
Confidence 99999999999999999998 88999999999999999999988754
No 9
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=100.00 E-value=1.1e-62 Score=540.05 Aligned_cols=461 Identities=29% Similarity=0.453 Sum_probs=402.7
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+|++ |+++.|.++.+ |+++++++++++.+.++.|+++++|+++++..++.+++..||+|+++.+.+
T Consensus 12 ~~~~--d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt~~eLa~av~~~Gg~G~i~~~~~----------- 78 (491)
T 1zfj_A 12 YTFD--DVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMS----------- 78 (491)
T ss_dssp CCGG--GEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSC-----------
T ss_pred CChh--hEEeccCcCCcCccccccchhhhhcceecCceEecCchhccHHHHHHHHHHcCCceEEeCCCC-----------
Confidence 8999 89999999998 889999999999899999999999999999999999999999999987654
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEee--CC
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTE--NG 222 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd--~~ 222 (590)
.+.+.+++++++. +. ++|..++.+ ++++.++++.| .+++++++||++ +
T Consensus 79 --------------~e~~~~~i~~v~~-~~--~im~~~~~~v~~~~tv~ea~~~m---------~~~~~~~~pVvd~~~- 131 (491)
T 1zfj_A 79 --------------ITEQAEEVRKVKR-SE--NGVIIDPFFLTPEHKVSEAEELM---------QRYRISGVPIVETLA- 131 (491)
T ss_dssp --------------HHHHHHHHHHHHH-HT--TTTSSSCCCBCSSSBHHHHHHHH---------HHTTCSEEEEESCTT-
T ss_pred --------------HHHHHHHHHHHhh-HH--hcCcCCCeEECCCCcHHHHHHHH---------HHcCCCEEEEEEeCC-
Confidence 3344444555554 32 377776665 88999999999 999999999998 6
Q ss_pred CCCCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccc
Q psy1056 223 KLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDL 302 (590)
Q Consensus 223 ~~~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dl 302 (590)
+++++|+||.+|++.... ...+++++|++ .+++++++++++.+++++|.+++++.+||+|++|+++|++|..|+
T Consensus 132 --~~~lvGivt~~Dl~~~~~---~~~~v~~im~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Di 205 (491)
T 1zfj_A 132 --NRKLVGIITNRDMRFISD---YNAPISEHMTS-EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDI 205 (491)
T ss_dssp --TCBEEEEEEHHHHHHCSC---SSSBTTTSCCC-SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHH
T ss_pred --CCEEEEEEEHHHHhhhcc---CCCcHHHHcCC-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHH
Confidence 699999999999985432 35889999984 257899999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCc
Q psy1056 303 KKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFG 382 (590)
Q Consensus 303 l~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~ 382 (590)
++....+....+..+.+.++..++......+.+..+.++|++.++++.+.|+....++.++++++.+|++|++.|++.+.
T Consensus 206 l~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~ 285 (491)
T 1zfj_A 206 EKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATA 285 (491)
T ss_dssp HHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSH
T ss_pred HHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCH
Confidence 99988766666666666777777776777888999999999999999988888888899999999998999999999999
Q ss_pred HHHHHHHHCCCCEEEEc-----ccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEE
Q psy1056 383 YQPRATLLNFIYQIEMI-----KFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTA 456 (590)
Q Consensus 383 ~~a~~l~~~Gvd~i~v~-----~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v 456 (590)
+.++.+.++|+|+|+|+ .|+++. +.+||. +..++.+++..+...++|||++|||+++.|++||+++||++|
T Consensus 286 ~~a~~~~~~Gad~I~vg~g~g~~~~tr~---~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v 362 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVGIGPGSICTTRV---VAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAV 362 (491)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTBCHHH---HTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECccCCcceEEee---ecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcce
Confidence 99999999999999995 477777 788888 888898888877667899999999999999999999999999
Q ss_pred EECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccc---cceeecccceeEEeeCCchhchH
Q psy1056 457 MMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM---DKLKVAQGVSGAIVDKGSVLRFL 533 (590)
Q Consensus 457 ~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~---~~~~~~eg~~~~~~~~~~~~~~~ 533 (590)
++|++|..++|+|++.++.+|++||.||||+|.+||.+ |+.+|||... ....++||+++.+|+++++.+++
T Consensus 363 ~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~------~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~ 436 (491)
T 1zfj_A 363 MLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKK------GSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIV 436 (491)
T ss_dssp EESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------------CCCCCSBCEEEEECCBCHHHHH
T ss_pred eeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhc------cccccccccccccccccCcCcceEecCcCCCHHHHH
Confidence 99999999999999999999999999999999999975 5778888632 23457999999999999999999
Q ss_pred HHHHhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCccccccccc
Q psy1056 534 PYLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYEKRL 589 (590)
Q Consensus 534 ~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~~~~ 589 (590)
++|..+||++|+++||+++.+|++. ..|+++|+++++||||||+++|+++.
T Consensus 437 ~~l~~~l~~~~~~~G~~~~~~l~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~~ 487 (491)
T 1zfj_A 437 FQMLGGIRSGMGYVGAGDIQELHEN-----AQFVEMSGAGLIESHPHDVQITNEAP 487 (491)
T ss_dssp HHHHHHHHHHHHHTTCSSHHHHHHH-----CCEEECCHHHHHHHSCCSSCCSSCBT
T ss_pred HHHHHHHHHHhhhcCcccHHHHHhc-----CcEEEEcccccccCCCccceeeccCC
Confidence 9999999999999999999999998 88999999999999999999998864
No 10
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=100.00 E-value=1.4e-60 Score=500.91 Aligned_cols=376 Identities=32% Similarity=0.427 Sum_probs=268.7
Q ss_pred EEEEeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHH
Q psy1056 66 LGIVTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKL 144 (590)
Q Consensus 66 vGivT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~ 144 (590)
---+|++ |+++.|+++++ ++++++++++++.+.++.|+++++|+++++..|++++++.||+|++|.+.+
T Consensus 7 ~~~~t~d--dvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~~~~-------- 76 (400)
T 3ffs_A 7 GKGLTFE--DILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMD-------- 76 (400)
T ss_dssp EEECCGG--GEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECSSSC--------
T ss_pred ccCCCce--eEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCCCCC--------
Confidence 3458999 99999999998 889999999999999999999999999999999999999999999999877
Q ss_pred HHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhccccccccccccCceeeEEeeCCCC
Q psy1056 145 LSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKL 224 (590)
Q Consensus 145 l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~ 224 (590)
.+.+.++++++|. +... ++.. |+.
T Consensus 77 -----------------~e~~~~~i~~vk~-~~~g-~~~~--------------------------------P~~----- 100 (400)
T 3ffs_A 77 -----------------MESQVNEVLKVKN-WISN-LEKN--------------------------------EST----- 100 (400)
T ss_dssp -----------------HHHHHHHHHHHHC-CC-----------------------------------------------
T ss_pred -----------------HHHHHHHHHHHHh-hccC-cccC--------------------------------CCC-----
Confidence 7777778887775 2211 0000 110
Q ss_pred CCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 225 GEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 225 ~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
|. . +++ ++..++++ .+|+.+
T Consensus 101 ------------------------~~-----~--nL~--~~~~~~~~---------------------------~~~~~~ 120 (400)
T 3ffs_A 101 ------------------------PD-----Q--NLD--KESTDGKD---------------------------TKSNNN 120 (400)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------cc-----c--ccc--CCCCCHHH---------------------------HHHHHH
Confidence 00 0 111 01111111 455556
Q ss_pred ccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHH
Q psy1056 305 SRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQ 384 (590)
Q Consensus 305 ~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~ 384 (590)
...++...++..+++.+++.++... .+.++.++++|++++++++++|++..+.+.++++++.+ ++|+++|+|.|.+.
T Consensus 121 ~~~~p~~~~d~~g~l~v~~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~V~t~e~ 197 (400)
T 3ffs_A 121 IDAYSNENLDNKGRLRVGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEA 197 (400)
T ss_dssp --CCTTCCBCTTSSBCCEEEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEEECSHHH
T ss_pred hhhCcchhhccccceeEEeecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEeecCCHHH
Confidence 6666666666677777788887664 78899999999999999999999888899999999988 89999999999999
Q ss_pred HHHHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 385 PRATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 385 a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
|+.+.++|||+|.+ ++|+++. ..++|. +.+++.++++.+...++||||+|||+++.|++|||++||++||+
T Consensus 198 A~~a~~aGAD~I~vG~g~Gs~~~tr~---~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 198 TKELIENGADGIKVGIGPGSICTTRI---VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp HHHHHHTTCSEEEECC---------C---CSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHcCCCEEEEeCCCCcCccccc---ccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 99999999999988 3567777 778888 88889999888766789999999999999999999999999999
Q ss_pred CccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccc--cceeecccceeEEeeCCchhchHHHH
Q psy1056 459 GSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM--DKLKVAQGVSGAIVDKGSVLRFLPYL 536 (590)
Q Consensus 459 g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~--~~~~~~eg~~~~~~~~~~~~~~~~~~ 536 (590)
|++|++|+|||++.++.+|++||.||||||++||.+ |+.+|||++. .+.+++||+++.|||+|++.++|.++
T Consensus 275 Gt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~------~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~ 348 (400)
T 3ffs_A 275 GSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKS------GSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQL 348 (400)
T ss_dssp CGGGTTBTTSSCCEEESSSSEEEC-----------------------------------------CEECCBCHHHHHHHH
T ss_pred ChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhc------cccchhhcccccccccCCCCcEEecCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999964 7889999863 45789999999999999999999999
Q ss_pred HhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccc
Q psy1056 537 QCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584 (590)
Q Consensus 537 ~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~ 584 (590)
.++||++|+|+|++||+|||++ ++|+++|++|++||||||+..
T Consensus 349 ~~glr~~~~y~G~~~i~el~~~-----~~f~~~t~~~~~e~~~h~~~~ 391 (400)
T 3ffs_A 349 VGGLRSCMGYLGSASIEELWKK-----SSYVEITTSGLRESHVHDVEI 391 (400)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHH-----CCEEECCC-------------
T ss_pred HHHHHHhhhhcCcccHHHHHhC-----CeEEEEccchhhcCCCCCccc
Confidence 9999999999999999999998 999999999999999999873
No 11
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=100.00 E-value=4.5e-58 Score=478.25 Aligned_cols=334 Identities=35% Similarity=0.496 Sum_probs=284.8
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
+|++ |+++.|.++++ ++++++++++++.+.++.|+++++|+++++..++.++++.||+|++|.+.+
T Consensus 14 ~~fd--dv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~s----------- 80 (366)
T 4fo4_A 14 LTFD--DVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMS----------- 80 (366)
T ss_dssp CCGG--GEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSC-----------
T ss_pred CCcc--eEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCCC-----------
Confidence 7899 88889999998 889999999998899999999999999999999999999999999987654
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCe
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEK 227 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~ 227 (590)
.+.+.+.++++++
T Consensus 81 --------------~e~~~~~i~~vk~----------------------------------------------------- 93 (366)
T 4fo4_A 81 --------------IEQQAAQVHQVKI----------------------------------------------------- 93 (366)
T ss_dssp --------------HHHHHHHHHHHHT-----------------------------------------------------
T ss_pred --------------HHHHHHHHHHHHh-----------------------------------------------------
Confidence 3333333333321
Q ss_pred EEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 228 LLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 228 lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.
T Consensus 94 -------------------------------~------------------------------------------------ 94 (366)
T 4fo4_A 94 -------------------------------S------------------------------------------------ 94 (366)
T ss_dssp -------------------------------T------------------------------------------------
T ss_pred -------------------------------c------------------------------------------------
Confidence 0
Q ss_pred CCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHH
Q psy1056 308 YPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRA 387 (590)
Q Consensus 308 ~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~ 387 (590)
+++.+++.++...+..+.++.++++|++++++++++|++..+++.++++++.+|++|+++|++.|.+.|++
T Consensus 95 ---------~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~ 165 (366)
T 4fo4_A 95 ---------GGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARA 165 (366)
T ss_dssp ---------TSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHH
T ss_pred ---------CceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHH
Confidence 01112223333334567889999999999999999999888899999999999999999999999999999
Q ss_pred HHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 388 TLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 388 l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
|.++|||+|.+ ++|+++. ..+||. +.+++.+++++++..++|||++|||+++.|++|||++|||+||+|++
T Consensus 166 a~~aGAD~I~vG~gpGs~~~tr~---~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~ 242 (366)
T 4fo4_A 166 LIEAGVSAVKVGIGPGSICTTRI---VTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSM 242 (366)
T ss_dssp HHHHTCSEEEECSSCSTTBCHHH---HHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred HHHcCCCEEEEecCCCCCCCccc---ccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 99999999998 5677777 788998 89999999888777789999999999999999999999999999999
Q ss_pred ccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccc--cceeecccceeEEeeCCchhchHHHHHhh
Q psy1056 462 LAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM--DKLKVAQGVSGAIVDKGSVLRFLPYLQCG 539 (590)
Q Consensus 462 l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~--~~~~~~eg~~~~~~~~~~~~~~~~~~~~~ 539 (590)
|++++|||++.++++|++||.||||||.+||.+ |+.+|||++. .+.++|||+++.|||||++.++|.++.++
T Consensus 243 f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~------~~~~ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~g 316 (366)
T 4fo4_A 243 FAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSK------GSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGG 316 (366)
T ss_dssp TTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC---------------------CCCSBCEEEEECCBCHHHHHHHHHHH
T ss_pred hhcCCCCCchhhhhCCceeEEeeccccHHHHhc------ccccchhccccccccccCCCcEEecCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999974 6889999864 35789999999999999999999999999
Q ss_pred hhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccc
Q psy1056 540 LKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584 (590)
Q Consensus 540 l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~ 584 (590)
||++|+|+|++||+|||++ ++|+++|++|++||||||+..
T Consensus 317 lr~~~~y~g~~~~~~~~~~-----~~f~~~t~~~~~e~~~h~~~~ 356 (366)
T 4fo4_A 317 LRSCMGLTGSATVEDLRTK-----AQFVRISGAGMKESHVHDVQI 356 (366)
T ss_dssp HHHHHHHHTCSBHHHHHHH-----CCEEECCHHHHHHHSCCSSCC
T ss_pred HHHhhhccCcccHHHHHhC-----CeEEEEccchhhccCCCCCcc
Confidence 9999999999999999998 999999999999999999874
No 12
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=100.00 E-value=3.1e-55 Score=458.04 Aligned_cols=332 Identities=36% Similarity=0.475 Sum_probs=250.9
Q ss_pred EEeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHH
Q psy1056 68 IVTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLS 146 (590)
Q Consensus 68 ivT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~ 146 (590)
-+|++ |+++.|+++++ ++++++++++++.+.++.|+++++|+++++..++.++++.||+|++|++.+
T Consensus 12 ~~~fd--dv~l~p~~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~~s---------- 79 (361)
T 3khj_A 12 GLTFE--DILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMD---------- 79 (361)
T ss_dssp CCCGG--GEEECCCCBCCCGGGCCCCEESSSSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSSSC----------
T ss_pred CCCcc--eEEEECCCCCCCHHHccCceecccccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecCCC----------
Confidence 38999 88889999988 889999999998899999999999999999999999999999999987654
Q ss_pred HcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhccccccccccccCceeeEEeeCCCCCC
Q psy1056 147 QAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGE 226 (590)
Q Consensus 147 ~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~ 226 (590)
.+.+.+.+++++. .
T Consensus 80 ---------------~e~~~~~I~~vk~-~-------------------------------------------------- 93 (361)
T 3khj_A 80 ---------------MESQVNEVLKVKN-S-------------------------------------------------- 93 (361)
T ss_dssp ---------------HHHHHHHHHHHHH-T--------------------------------------------------
T ss_pred ---------------HHHHHHHHHHHHh-c--------------------------------------------------
Confidence 2222222222221 0
Q ss_pred eEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 227 KLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 227 ~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
T Consensus 94 -------------------------------------------------------------------------------- 93 (361)
T 3khj_A 94 -------------------------------------------------------------------------------- 93 (361)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHH
Q psy1056 307 DYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPR 386 (590)
Q Consensus 307 ~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~ 386 (590)
.++.++++++... .+.++.++++|+++++++.++|++..+.+.++++++.+ ++|+++|++.+.+.|+
T Consensus 94 ----------~~~pvga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~v~t~e~A~ 160 (361)
T 3khj_A 94 ----------GGLRVGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATK 160 (361)
T ss_dssp ----------TCCCCEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEEECSHHHHH
T ss_pred ----------cCceEEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEccCCCHHHHH
Confidence 0001122222222 57788899999999999999999888899999999998 8999999999999999
Q ss_pred HHHHCCCCEEEE-----cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 387 ATLLNFIYQIEM-----IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 387 ~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
.+.++|+|+|.| ++|+++. ..+||. +.+++.++++.+...++|||++|||+++.|++|||++|||+||+|+
T Consensus 161 ~l~~aGaD~I~VG~~~Gs~~~tr~---~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs 237 (361)
T 3khj_A 161 ELIENGADGIKVGIGPGSICTTRI---VAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGS 237 (361)
T ss_dssp HHHHTTCSEEEECSSCCTTCCHHH---HTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEEST
T ss_pred HHHHcCcCEEEEecCCCcCCCccc---ccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 999999999998 4677777 788988 8889999988776668999999999999999999999999999999
Q ss_pred cccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccc--cceeecccceeEEeeCCchhchHHHHHh
Q psy1056 461 LLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM--DKLKVAQGVSGAIVDKGSVLRFLPYLQC 538 (590)
Q Consensus 461 ~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~--~~~~~~eg~~~~~~~~~~~~~~~~~~~~ 538 (590)
+|++++|||+++++.+|++||.||||||.+||.+ |+.+|||++. .+.+++||+++.|||||++.++|.++.+
T Consensus 238 ~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~------~~~~~y~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~ 311 (361)
T 3khj_A 238 ILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKS------GSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVG 311 (361)
T ss_dssp TTTTBTTSSCEEEEETTEEEEEC---------------------------------------CEEECCBCHHHHHHHHHH
T ss_pred hhhcCCcCCcchhhcCCeEEEEeeccchHHHHhc------cchhhhhcccccccccCCCccEEeCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999964 6889999864 4578999999999999999999999999
Q ss_pred hhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccc
Q psy1056 539 GLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYS 584 (590)
Q Consensus 539 ~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~ 584 (590)
+||++|+|+|++||+|||++ ++|+++|++|++||||||+..
T Consensus 312 gl~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~e~~~h~~~~ 352 (361)
T 3khj_A 312 GLRSCMGYLGSASIEELWKK-----SSYVEITTSGLRESHVHDVEI 352 (361)
T ss_dssp HHHHHHHHTTCSSHHHHHHH-----CCEEECCC-------------
T ss_pred HHHHhhhhcCCccHHHHHhC-----CeEEEEccchhhcCCCCCccc
Confidence 99999999999999999998 999999999999999999873
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.8e-52 Score=433.14 Aligned_cols=237 Identities=26% Similarity=0.328 Sum_probs=199.6
Q ss_pred eccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccc--
Q psy1056 325 IGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFI-- 402 (590)
Q Consensus 325 i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~-- 402 (590)
++......+.++.++++|++++.+|.++|+...+.+.++++++.+|++|+++|++.|+++|+.|+++|||+|+|+++.
T Consensus 95 ~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~ 174 (361)
T 3r2g_A 95 VGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGS 174 (361)
T ss_dssp ECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSS
T ss_pred cCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCc
Confidence 344456678899999999999999999999888889999999998899999999999999999999999999985443
Q ss_pred ---cccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEee-cC
Q psy1056 403 ---KKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFS-DG 477 (590)
Q Consensus 403 ---~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~-~g 477 (590)
++. ..++|. +.+++.++.+.+ . |||++|||+++.|++|||++|||+||+|++|++++|||+++++. ||
T Consensus 175 ~~~tr~---~~g~g~p~l~aI~~~~~~~---~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g 247 (361)
T 3r2g_A 175 VCSTRI---KTGFGVPMLTCIQDCSRAD---R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDG 247 (361)
T ss_dssp CHHHHH---HHCCCCCHHHHHHHHTTSS---S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTS
T ss_pred Cccccc---cCCccHHHHHHHHHHHHhC---C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCC
Confidence 333 456777 666666655332 2 99999999999999999999999999999999999999999999 99
Q ss_pred eeeeeeeccccHHHHhcccCCCcccchhhhccc-cceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHH
Q psy1056 478 VRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEM-DKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLR 556 (590)
Q Consensus 478 ~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~-~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~ 556 (590)
++||.||||||. +.+|||++. .+.+++||+++.|||+|++.++|.+|.++||++|+|+|++||+|||
T Consensus 248 ~~~k~y~Gm~s~------------~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~ 315 (361)
T 3r2g_A 248 SKVKRYRGMASR------------EAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQ 315 (361)
T ss_dssp CEEEEESCCHHH------------HHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHH
T ss_pred eEEEEEecCCCc------------chhhhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHH
Confidence 999999999993 346778643 3445999999999999999999999999999999999999999999
Q ss_pred HhhccCceEEEEEecCccccCCCCccccc
Q psy1056 557 AMMYSGELKFEKRTLCAQNEGSVHGLYSY 585 (590)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~e~~~h~~~~~ 585 (590)
++ ++|+++|++|++||||||+..=
T Consensus 316 ~~-----~~~~~~~~~~~~e~~~h~~~~~ 339 (361)
T 3r2g_A 316 RK-----LNYVIVTQAGRIESLPHKLLEG 339 (361)
T ss_dssp HT-----CCEEECCSTTC-----------
T ss_pred hC-----CeEEEEccchhhccCCcccccc
Confidence 98 9999999999999999998743
No 14
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=100.00 E-value=4.7e-43 Score=374.27 Aligned_cols=385 Identities=33% Similarity=0.466 Sum_probs=251.2
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHH
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQ 147 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~ 147 (590)
.+++ |+++.|+...+ ++++++++.+.+...++.|++.++|...++..++.+++..||+|+++.+.+
T Consensus 10 ~~fd--~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s----------- 76 (404)
T 1eep_A 10 LTFD--DVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMS----------- 76 (404)
T ss_dssp CCGG--GEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSC-----------
T ss_pred CCcc--cEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCC-----------
Confidence 5778 67777998886 688999999887788899999999999999999999999999999986554
Q ss_pred cCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCe
Q psy1056 148 AGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEK 227 (590)
Q Consensus 148 ~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~ 227 (590)
.+.....+..++. +. . . +
T Consensus 77 --------------~e~~~~~~~~~~~-~~-----------------------------------~-------~----~- 94 (404)
T 1eep_A 77 --------------IEAQRKEIEKVKT-YK-----------------------------------F-------Q----K- 94 (404)
T ss_dssp --------------HHHHHHHHHHHHT-CC--------------------------------------------------
T ss_pred --------------HHHHHHHHHHHHh-hc-----------------------------------c-------C----C-
Confidence 2223333322222 00 0 0 1
Q ss_pred EEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 228 LLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 228 lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
|+++.+|+.+.. . ++.+.++..++++ +.+++.....
T Consensus 95 --g~~~~~~~~~~~---------~-------~l~~~~~~~~~~~--------------------------~~~~~~~~~~ 130 (404)
T 1eep_A 95 --TINTNGDTNEQK---------P-------EIFTAKQHLEKSD--------------------------AYKNAEHKED 130 (404)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred --Cceecccccccc---------c-------cccccCCCCCHHH--------------------------HHHHHHHhhh
Confidence 455555543210 0 1111111111111 1222222223
Q ss_pred CCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHH
Q psy1056 308 YPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRA 387 (590)
Q Consensus 308 ~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~ 387 (590)
++...++..+++.++++++......+.+..++++|++++.++.++|++....+.++++++.+|++|++++++.+.++|+.
T Consensus 131 ~p~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~ 210 (404)
T 1eep_A 131 FPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALD 210 (404)
T ss_dssp CTTCCBCTTSCBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHH
T ss_pred cchhhhhcccCceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHH
Confidence 33223334445556777776556677888899999999999888888888889999999999889999999999999999
Q ss_pred HHHCCCCEEEEcc-----cccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 388 TLLNFIYQIEMIK-----FIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 388 l~~~Gvd~i~v~~-----~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
+.++|+|+|.|+. ++++. ..+||. +...+.++.+.+...++|||++|||+++.|++||+++|||+|++|++
T Consensus 211 a~~~Gad~I~vg~~~G~~~~~~~---~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~ 287 (404)
T 1eep_A 211 LISVGADCLKVGIGPGSICTTRI---VAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNL 287 (404)
T ss_dssp HHTTTCSEEEECSSCSTTSHHHH---HHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHhcCCCEEEECCCCCcCcCccc---cCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHH
Confidence 9999999998832 23333 456777 77788888887765689999999999999999999999999999999
Q ss_pred ccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhcc---ccceeecccceeEEeeCCchhchHHHHHh
Q psy1056 462 LAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNE---MDKLKVAQGVSGAIVDKGSVLRFLPYLQC 538 (590)
Q Consensus 462 l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~---~~~~~~~eg~~~~~~~~~~~~~~~~~~~~ 538 (590)
|+.+.|||++..+++|+.||.||||++.++|.+ |+.++|++. ..+.++++|+++.+|++|+|.++|++|..
T Consensus 288 ~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~------g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~ 361 (404)
T 1eep_A 288 FAGTKESPSEEIIYNGKKFKSYVGMGSISAMKR------GSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKG 361 (404)
T ss_dssp HHTBTTSSSCEEEETTEEEEC------------------------------------------CEECCBCHHHHHHHHHH
T ss_pred HhcCCCCCcchhhhCCeEEeecCCCCCHHHHhh------ccccchhcccccccccccCceeEEeccCCccHHHHHHHHHH
Confidence 999999999999999999999999999999875 566788762 12456799999999999999999999999
Q ss_pred hhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccccc
Q psy1056 539 GLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYE 586 (590)
Q Consensus 539 ~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~ 586 (590)
+|+++|+|+|+++++||++. ..|+++|+++++||||||+++|+
T Consensus 362 el~~~m~~~G~~~i~~l~~~-----~~~~~~~~~~~~e~~~~~~~~~~ 404 (404)
T 1eep_A 362 GLMSGMGYLGAATISDLKIN-----SKFVKISHSSLKESHPHDVFSIT 404 (404)
T ss_dssp HHHHHHHHHTCSSHHHHHHS-----CCEEECCCC--------------
T ss_pred HHHHHHHHhCCCCHHHHhhc-----CcEEEEchhhhccCcCceeeecC
Confidence 99999999999999999998 89999999999999999999874
No 15
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=8.1e-42 Score=355.99 Aligned_cols=223 Identities=28% Similarity=0.379 Sum_probs=199.7
Q ss_pred HHHHHHHHHHc--CCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc-----ccc
Q psy1056 331 DKNRLKLLSQA--GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-----FIK 403 (590)
Q Consensus 331 ~~e~~~~li~~--gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-----~~~ 403 (590)
..+.++.+++. |++++.++.++|+...+.+.++++++.+|++|+++|++.|.++|+++.++|||+|+|+. |++
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~ 198 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTT 198 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCc
Confidence 34567777776 89999999888888888899999999998899999999999999999999999999854 334
Q ss_pred ccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeee
Q psy1056 404 KEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKK 482 (590)
Q Consensus 404 ~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~ 482 (590)
+. +.+||. +++++.++++.+...++|||++|||++|.|++|||+||||+|++|++|+.++|||++.++++|+.||.
T Consensus 199 r~---~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~ 275 (351)
T 2c6q_A 199 RK---KTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKL 275 (351)
T ss_dssp HH---HHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEE
T ss_pred cc---cCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeee
Confidence 66 788998 88999999888766689999999999999999999999999999999999999999999999999999
Q ss_pred eeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHhhccC
Q psy1056 483 YRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAMMYSG 562 (590)
Q Consensus 483 ~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~ 562 (590)
||||||.+||... +|+.++|+ .+||+|+.+||+|++.++|++|.++||++|+|+||+||+||+++
T Consensus 276 ~~g~~~~~a~~~~----~g~~~~~~-------~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~---- 340 (351)
T 2c6q_A 276 FYGMSSEMAMKKY----AGGVAEYR-------ASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRR---- 340 (351)
T ss_dssp EECTTBHHHHHHH----SSSCCTTC-------CCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHH----
T ss_pred ccccccHhhhhcc----cccccccc-------cccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhC----
Confidence 9999999999753 35566665 46999999999999999999999999999999999999999998
Q ss_pred ceEEEEEecC
Q psy1056 563 ELKFEKRTLC 572 (590)
Q Consensus 563 ~~~~~~~~~~ 572 (590)
..|+++|++
T Consensus 341 -~~~v~~~~~ 349 (351)
T 2c6q_A 341 -TTFIRVTQQ 349 (351)
T ss_dssp -CCEEEC---
T ss_pred -CcEEEEecC
Confidence 899999975
No 16
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=5.4e-34 Score=296.48 Aligned_cols=224 Identities=27% Similarity=0.298 Sum_probs=166.8
Q ss_pred hhHHHHHHHHHHcC--CcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccC
Q psy1056 329 EADKNRLKLLSQAG--VDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEY 406 (590)
Q Consensus 329 ~~~~e~~~~li~~g--ad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~ 406 (590)
.+..+.++.+.+.+ ++++.++.++|+.....+.++++++.++..|++.|++.+.++|+++.++|||+|.++.+.++..
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~ 184 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVC 184 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCcee
Confidence 34456677888888 8999998888877778899999999997778888889999999999999999998866554431
Q ss_pred C--Ccccccc---chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeee
Q psy1056 407 P--DMQVIGR---NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLK 481 (590)
Q Consensus 407 ~--~~~~~g~---~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k 481 (590)
+ ...+||. +...+.++++ ..++|||++|||+++.|++|||++|||+|++|++|++|+|||++.++++|+.||
T Consensus 185 ~~~~~~~~g~~g~~~~~l~~v~~---~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k 261 (336)
T 1ypf_A 185 ITKIKTGFGTGGWQLAALRWCAK---AASKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYK 261 (336)
T ss_dssp HHHHHHSCSSTTCHHHHHHHHHH---TCSSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC--------
T ss_pred ecccccCcCCchhHHHHHHHHHH---HcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEee
Confidence 0 0234443 3444555544 347999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHhhcc
Q psy1056 482 KYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAMMYS 561 (590)
Q Consensus 482 ~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~ 561 (590)
.||||++.+++.. ...+||+++.+|++|++.+++++|..+||++|+++|+++++||++
T Consensus 262 ~~~g~~~~~~~g~------------------~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~---- 319 (336)
T 1ypf_A 262 EYFGSASEFQKGE------------------KKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRT---- 319 (336)
T ss_dssp ---------------------------------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGG----
T ss_pred eeecccchhhccC------------------ccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCc----
Confidence 9999999876321 135899999999999999999999999999999999999999975
Q ss_pred CceEEEEEecCccccCCC
Q psy1056 562 GELKFEKRTLCAQNEGSV 579 (590)
Q Consensus 562 ~~~~~~~~~~~~~~e~~~ 579 (590)
..|+++|.+++.|+..
T Consensus 320 --~~~~~~~~~~~~~~~~ 335 (336)
T 1ypf_A 320 --VDYVVVKNSIFNGDKV 335 (336)
T ss_dssp --CCEEECSCCC------
T ss_pred --CCEEEEccccccCCCC
Confidence 5899999999999753
No 17
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.93 E-value=2.9e-24 Score=228.29 Aligned_cols=192 Identities=23% Similarity=0.248 Sum_probs=150.1
Q ss_pred HHHHHHHHHcCCcEEEEecCC-----CchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc--cccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQ-----GNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK--FIKK 404 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~-----G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~--~~~~ 404 (590)
.+.+..+.++|++++.++... +.+......+.++++.+ ++|+++|++.|+++|+.+.++|+|+|.|+. ++++
T Consensus 168 ~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~ 246 (393)
T 2qr6_A 168 REIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-DVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNS 246 (393)
T ss_dssp HHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-SSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHH
T ss_pred HHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-CCCEEECCcCCHHHHHHHHHcCCCEEEECCCccccc
Confidence 455666778899999887432 12222344578888888 799999999999999999999999999865 5666
Q ss_pred cCCCcccccc-chhHHHHHHHHH----hcCC---CcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeec
Q psy1056 405 EYPDMQVIGR-NGTAVYRVAEYA----SRRG---VPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSD 476 (590)
Q Consensus 405 ~~~~~~~~g~-~~~~l~~~~~~~----~~~~---v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~ 476 (590)
. +.+||. +..++.++.+.+ .+.+ +|||++|||+++.|++|||++|||+|++|++|+.+.|||++.
T Consensus 247 ~---~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~---- 319 (393)
T 2qr6_A 247 L---ALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKG---- 319 (393)
T ss_dssp H---HTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTT----
T ss_pred c---cCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCce----
Confidence 6 778999 888998887762 2122 999999999999999999999999999999999999999985
Q ss_pred CeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEee----CCchh----------chHHHHHhhhhh
Q psy1056 477 GVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVD----KGSVL----------RFLPYLQCGLKH 542 (590)
Q Consensus 477 g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~----~~~~~----------~~~~~~~~~l~~ 542 (590)
.+|||++.+. .+++|++..+|. .+.+. +++++|..+||+
T Consensus 320 -----~~~g~~~~~~----------------------~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~ 372 (393)
T 2qr6_A 320 -----YFWPAVAAHP----------------------RFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKR 372 (393)
T ss_dssp -----EECCGGGGCS----------------------SSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHH
T ss_pred -----EEEecccCcc----------------------cCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHH
Confidence 2588887532 256677665543 33333 444688999999
Q ss_pred hCcccCcCcHHHHHHh
Q psy1056 543 GCQDIGAKSLSNLRAM 558 (590)
Q Consensus 543 ~m~~~G~~~i~~l~~~ 558 (590)
+|+|+||+|++||++.
T Consensus 373 ~m~~~G~~~i~el~~~ 388 (393)
T 2qr6_A 373 ALAKCGYTDLKSFQKV 388 (393)
T ss_dssp HHHHHTCSBHHHHTTC
T ss_pred HHHHhCCCCHHHHhhc
Confidence 9999999999999865
No 18
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.89 E-value=9.1e-24 Score=224.16 Aligned_cols=193 Identities=54% Similarity=0.893 Sum_probs=92.8
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCC
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS 80 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~ 80 (590)
|||||||+++|+++|++||+++++|..+|+|++|+.|+.||+++|.+++++++||+|++...++|+||+|.+|+++.
T Consensus 120 vIH~n~sie~Qa~~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--- 196 (556)
T 4af0_A 120 IIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--- 196 (556)
T ss_dssp EECCSSCHHHHHHHHHHHHHCCC---------------------------------------------------------
T ss_pred EEcCCCCHHHHHHHHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---
Confidence 69999999999999999999999999999999999999999999999999999999986556899999999987662
Q ss_pred CCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHH-HHHH-------------cCC-------------------
Q psy1056 81 ANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAI-AMAL-------------CGG------------------- 127 (590)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~-~~~~-------------~G~------------------- 127 (590)
+..+++.+.+ +. .++..+.++..+++..+ .-.+ .|.
T Consensus 197 ---------d~~~~V~evM-T~-~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d 265 (556)
T 4af0_A 197 ---------DAETPIKSVM-TT-EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVP 265 (556)
T ss_dssp ------------------------------------------------------------------------CTTCCBCT
T ss_pred ---------ccceEhhhhc-cc-ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcc
Confidence 2223333222 22 23333333222211111 0000 010
Q ss_pred ------eeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhcc
Q psy1056 128 ------IGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVD 201 (590)
Q Consensus 128 ------~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~ 201 (590)
.|..-....++.+|+..|+++|+|+|++|++||+.+.+.+.+++++..+|..+++..|+.+.+..+++++..||
T Consensus 266 ~~grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD 345 (556)
T 4af0_A 266 ESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGAD 345 (556)
T ss_dssp TTCCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCS
T ss_pred hhhceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCC
Confidence 11111223467999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q psy1056 202 GLRVGS 207 (590)
Q Consensus 202 ~~~v~~ 207 (590)
++|||+
T Consensus 346 ~vkVGi 351 (556)
T 4af0_A 346 GLRIGM 351 (556)
T ss_dssp EEEECS
T ss_pred EEeecC
Confidence 999996
No 19
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.87 E-value=5.5e-22 Score=200.03 Aligned_cols=244 Identities=21% Similarity=0.323 Sum_probs=160.7
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccC-CcccceeEEEEeccccccccCCCCC-CC-Cc--cC----Cccc
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTEN-GKLGEKLLGIVTSRDVDFLENSANM-DL-KI--EK----DLSS 93 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~-~~~~~~lvGivT~~Did~l~~~~~~-~~-~~--~~----~~~~ 93 (590)
.+|.++++++++++|+.+|+++|.+++++++||+|+ + |+++|++|.+|+--++...+. .+ .. .. ....
T Consensus 8 ~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~---~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T 3kh5_A 8 IAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGN---NKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINE 84 (280)
T ss_dssp TSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTT---CBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTS
T ss_pred HhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCC---CeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhh
Confidence 468889999999999999999999999999999996 4 799999999964222111100 00 00 00 0122
Q ss_pred ccccccccCCceeeCCCCCCchHHHHHHHHHc--CCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHH
Q psy1056 94 PLTKKITLAAPLVSSPMDTVTESDMAIAMALC--GGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKY 171 (590)
Q Consensus 94 ~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~--G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~ 171 (590)
++.+ ++.+.++...+..++.+ ... .+... +.+.++..+.. ++.+- ........+..
T Consensus 85 ~v~~-im~~~~~~v~~~~~~~~-a~~-~~~~~~~~~~~Vvd~~~~---------------~~Giv----t~~dl~~~~~~ 142 (280)
T 3kh5_A 85 PVRE-IMEENVITLKENADIDE-AIE-TFLTKNVGGAPIVNDENQ---------------LISLI----TERDVIRALLD 142 (280)
T ss_dssp BGGG-TSBCSCCCEETTCBHHH-HHH-HHHHTTCSEEEEECTTCB---------------EEEEE----EHHHHHHHHGG
T ss_pred hHHH-hcCCCCEEECCCCCHHH-HHH-HHHhCCCCEEEEEcCCCE---------------EEEEE----EHHHHHHHHhh
Confidence 3332 33332322222223222 221 12222 22333322110 00000 01111111111
Q ss_pred -hhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccccc----
Q psy1056 172 -IKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS---- 243 (590)
Q Consensus 172 -vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~---- 243 (590)
.....+..++|..++.+ ++++.++++.| .+++++.+||++ +|+++|++|.+|+......
T Consensus 143 ~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~---------~~~~~~~~~Vv~----~~~~~Givt~~dl~~~~~~~~~~ 209 (280)
T 3kh5_A 143 KIDENEVIDDYITRDVIVATPGERLKDVARTM---------VRNGFRRLPVVS----EGRLVGIITSTDFIKLLGSDWAF 209 (280)
T ss_dssp GSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHH---------HHHTCSEEEEEE----TTEEEEEEEHHHHHHHHTSHHHH
T ss_pred cCCCCCCHHHHhCCCCeEECCCCcHHHHHHHH---------HHcCCCEEEEEE----CCEEEEEEEHHHHHHHHhhhhhh
Confidence 11112445688766655 88999999999 999999999995 4999999999999722111
Q ss_pred ---------cccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 244 ---------ANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 244 ---------~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
.....+++++|++ +++++++++++.+|++.|.+++++++||+|++|+++|+||.+|+++.+
T Consensus 210 ~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 210 NHMQTGNVREITNVRMEEIMKR--DVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHHHSCCTHHHHHCBHHHHSBS--SCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred hhhcccchhhhhCCcHHHHhcC--CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 1135789999998 999999999999999999999999999999999999999999999864
No 20
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=1.8e-21 Score=196.66 Aligned_cols=237 Identities=22% Similarity=0.267 Sum_probs=148.2
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLT 96 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~ 96 (590)
+|+++ |+++++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+ |++..+. ..++.
T Consensus 2 ~v~~i---m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~---~~~~Giv~~~--dl~~~~~----------~~~v~ 63 (282)
T 2yzq_A 2 RVKTI---MTQNPVTITLPATRNYALELFKKYKVRSFPVVNKE---GKLVGIISVK--RILVNPD----------EEQLA 63 (282)
T ss_dssp BHHHH---SEESCCCEESSCC------------CCEEEEECTT---CCEEEEEESS--CC--------------------
T ss_pred chHHh---ccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC---CcEEEEEEHH--HHHhhhc----------cCCHH
Confidence 34555 99999999999999999999999999999999965 7999999999 4442211 11222
Q ss_pred cccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHH-Hhh--
Q psy1056 97 KKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIK-YIK-- 173 (590)
Q Consensus 97 ~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~-~vk-- 173 (590)
+ ++...++...+.+++.+....+.-...+.+.++..+.. ++ |. ....+.++ .+.
T Consensus 64 ~-~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~---------------~~------Gi-it~~di~~~~~~~~ 120 (282)
T 2yzq_A 64 M-LVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGK---------------PV------GI-LTVGDIIRRYFAKS 120 (282)
T ss_dssp C-CCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSC---------------EE------EE-EEHHHHHHHTTTTC
T ss_pred H-HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCE---------------EE------EE-EEHHHHHHHHHhcc
Confidence 2 22232333333333332222211112222333321100 00 10 01111112 111
Q ss_pred ---hcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh------ccc
Q psy1056 174 ---KEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD------FLE 241 (590)
Q Consensus 174 ---~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~------~~~ 241 (590)
...+..++|..++.+ ++++.++++.| .+++++++||+++ +++++|++|.+|+. ...
T Consensus 121 ~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~---------~~~~~~~l~Vvd~---~~~~~Giit~~dl~~~~~~~~~~ 188 (282)
T 2yzq_A 121 EKYKGVEIEPYYQRYVSIVWEGTPLKAALKAL---------LLSNSMALPVVDS---EGNLVGIVDETDLLRDSEIVRIM 188 (282)
T ss_dssp SGGGGCBSTTTSBSCCCCEETTSBHHHHHHHH---------HTCSSSEEEEECT---TSCEEEEEEGGGGGGCGGGCC--
T ss_pred CCcccCcHHHHhCCCCEEECCCCCHHHHHHHH---------HHcCCcEEEEEcC---CCeEEEEEEHHHHhhhhhhhhhh
Confidence 113445688766655 88999999999 9999999999997 68999999999997 211
Q ss_pred c--------------------------ccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEE
Q psy1056 242 N--------------------------SANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIA 295 (590)
Q Consensus 242 ~--------------------------~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~G 295 (590)
. ......+++++|++ +++++++++++.+|+++|.+++++++||+|++|+++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvG 266 (282)
T 2yzq_A 189 KSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTR--DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIG 266 (282)
T ss_dssp ------------------------------CCCBGGGTCBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEE
T ss_pred ccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCC--CCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEE
Confidence 0 11235789999998 9999999999999999999999999999998899999
Q ss_pred EEeecccccccCC
Q psy1056 296 LIARTDLKKSRDY 308 (590)
Q Consensus 296 iit~~dll~~~~~ 308 (590)
+||++|+++....
T Consensus 267 iit~~Dil~~~~~ 279 (282)
T 2yzq_A 267 LIRDFDLLKVLVK 279 (282)
T ss_dssp EEEHHHHGGGGCC
T ss_pred EEeHHHHHHHHHh
Confidence 9999999987653
No 21
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=1.4e-21 Score=199.23 Aligned_cols=238 Identities=16% Similarity=0.212 Sum_probs=176.5
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLT 96 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~ 96 (590)
+|++. |+++++++++++|+.+|+++|.+++++++||+| + +++|++|.+|+.-.+...
T Consensus 21 ~V~di---m~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~----~l~GivT~~Di~~~~~~~--------------- 77 (296)
T 3ddj_A 21 NIETL---MIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-E----KIEGLLTTRDLLSTVESY--------------- 77 (296)
T ss_dssp SGGGT---CEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-S----SEEEEEEHHHHHGGGTTC---------------
T ss_pred CHHHh---ccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-C----eEEEEEeHHHHHHHhccc---------------
Confidence 56666 999999999999999999999999999999999 6 999999999532211000
Q ss_pred cccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcC
Q psy1056 97 KKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEY 176 (590)
Q Consensus 97 ~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~ 176 (590)
.+. ... ....... .. .
T Consensus 78 ------~~~-----~~~------------------------------------------------~~~~~~~----~~-~ 93 (296)
T 3ddj_A 78 ------CKD-----SCS------------------------------------------------QGDLYHI----ST-T 93 (296)
T ss_dssp ------C--------CC------------------------------------------------HHHHHHH----HT-S
T ss_pred ------ccc-----ccc------------------------------------------------chhhHHH----hc-c
Confidence 000 000 0000000 01 2
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccccccccccchhhc
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKV 253 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~~~~~~~V~~i 253 (590)
+..++|+.++.+ ++++.++++.| .+++++++||+|+ +++++|++|.+|+...........++.++
T Consensus 94 ~v~~im~~~~~~v~~~~~~~~a~~~m---------~~~~~~~lpVvd~---~~~lvGivt~~dl~~~~~~~~~~~~v~~~ 161 (296)
T 3ddj_A 94 PIIDYMTPNPVTVYNTSDEFTAINIM---------VTRNFGSLPVVDI---NDKPVGIVTEREFLLLYKDLDEIFPVKVF 161 (296)
T ss_dssp BGGGTSEESCCCEETTSCHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHGGGGGGSCCCCBHHHH
T ss_pred cHHHhccCCCEEEcCCCCHHHHHHHH---------HHcCCCEEEEEcC---CCcEEEEEeHHHHHHhhhcccccccHHHh
Confidence 334578776655 88999999999 9999999999988 69999999999998433322345799999
Q ss_pred cccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC-----------CCCCcccCCceEEe
Q psy1056 254 MTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY-----------PDSSKDENNQLIVG 322 (590)
Q Consensus 254 m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~-----------~~~~~d~~~~l~v~ 322 (590)
|++ +++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+++.... .....+....- .
T Consensus 162 m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~--~ 237 (296)
T 3ddj_A 162 MST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTN--L 237 (296)
T ss_dssp SBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCC--C
T ss_pred hcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCC--C
Confidence 998 99999999999999999999999999999999999999999999887531 11111111110 1
Q ss_pred EeeccchhHHHHHHHHHHcCCcEEEEecCCCchhh
Q psy1056 323 AAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIY 357 (590)
Q Consensus 323 a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~ 357 (590)
..+....+..+.++.|.+.+...+.|...+|...|
T Consensus 238 ~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~G 272 (296)
T 3ddj_A 238 VTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRG 272 (296)
T ss_dssp CBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEE
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEE
Confidence 23445667788999999999988877665665544
No 22
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.82 E-value=6.2e-21 Score=198.33 Aligned_cols=181 Identities=12% Similarity=0.139 Sum_probs=134.2
Q ss_pred EEeEeeccchhHHHHHHHHHHcCCcEEEEec--------CCCch--hhHHHHHHHHHHhCCCceEEeccc---cCcHHHH
Q psy1056 320 IVGAAIGTREADKNRLKLLSQAGVDVVILDS--------SQGNS--IYQIEMIKFIKKEYPDMQVIGGNV---LFGYQPR 386 (590)
Q Consensus 320 ~v~a~i~~~~~~~e~~~~li~~gad~i~V~~--------~~G~~--~~~l~~i~~i~~~~~~vpvi~g~v---~s~~~a~ 386 (590)
++.++++......+..+.+-..++|.+.++. ++|++ ..+++.++++++.+ ++||++|++ .++++|+
T Consensus 146 ~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~vg~g~s~e~A~ 224 (365)
T 3sr7_A 146 LLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL-QLPFILKEVGFGMDVKTIQ 224 (365)
T ss_dssp CEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEECSSCCCHHHHH
T ss_pred cEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEECCCCCCHHHHH
Confidence 3456666544333444444456777766654 24655 35789999999998 799999999 6999999
Q ss_pred HHHHCCCCEEEEccccccc---------C--CCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCC
Q psy1056 387 ATLLNFIYQIEMIKFIKKE---------Y--PDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGAS 454 (590)
Q Consensus 387 ~l~~~Gvd~i~v~~~~~~~---------~--~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~ 454 (590)
.+.++|||+|+|+...++. . ..+.+||. ++.++.+++... .++|||++|||+|+.|++|||++|||
T Consensus 225 ~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~--~~ipvia~GGI~~g~Dv~KaLalGAd 302 (365)
T 3sr7_A 225 TAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLM--DKVEILASGGIRHPLDIIKALVLGAK 302 (365)
T ss_dssp HHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGT--TTSEEEECSSCCSHHHHHHHHHHTCS
T ss_pred HHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhc--CCCeEEEeCCCCCHHHHHHHHHcCCC
Confidence 9999999999885443321 0 12457898 888887664321 25999999999999999999999999
Q ss_pred EEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHH
Q psy1056 455 TAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLP 534 (590)
Q Consensus 455 ~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~ 534 (590)
+|++|++|..+ ++ . .| ...+.++++
T Consensus 303 aV~ig~~~l~a--------------------~~-----~-----------------------~G-------~~~v~~~l~ 327 (365)
T 3sr7_A 303 AVGLSRTMLEL--------------------VE-----Q-----------------------HS-------VHEVIAIVN 327 (365)
T ss_dssp EEEESHHHHHH--------------------HH-----H-----------------------SC-------HHHHHHHHH
T ss_pred EEEECHHHHHH--------------------HH-----h-----------------------cC-------hHHHHHHHH
Confidence 99999988311 00 0 01 113778899
Q ss_pred HHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 535 YLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 535 ~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.|..+|+..|.++|++++.||++.
T Consensus 328 ~l~~eL~~~m~~~G~~si~eL~~~ 351 (365)
T 3sr7_A 328 GWKEDLRLIMCALNCQTIAELRNV 351 (365)
T ss_dssp HHHHHHHHHHHHTTCSSTGGGGGC
T ss_pred HHHHHHHHHHHHhCCcCHHHhccC
Confidence 999999999999999999999975
No 23
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.82 E-value=1.4e-20 Score=191.91 Aligned_cols=179 Identities=21% Similarity=0.257 Sum_probs=144.5
Q ss_pred ccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccccc
Q psy1056 21 YKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKIT 100 (590)
Q Consensus 21 ~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~~~ 100 (590)
++++|.++++++++++++.+|+++|.+++++++||+|++ ++++|++|.+| ++... ....
T Consensus 95 v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~---~~lvGivt~~d--l~~~~---------------~~~~- 153 (296)
T 3ddj_A 95 IIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN---DKPVGIVTERE--FLLLY---------------KDLD- 153 (296)
T ss_dssp GGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTT---SCEEEEEEHHH--HGGGG---------------GGSC-
T ss_pred HHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC---CcEEEEEeHHH--HHHhh---------------hccc-
Confidence 445599999999999999999999999999999999876 79999999994 43100 0000
Q ss_pred cCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcc
Q psy1056 101 LAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQ 180 (590)
Q Consensus 101 ~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~ 180 (590)
.. .+..+
T Consensus 154 ~~-------------------------------------------------------------------------~~v~~ 160 (296)
T 3ddj_A 154 EI-------------------------------------------------------------------------FPVKV 160 (296)
T ss_dssp CC-------------------------------------------------------------------------CBHHH
T ss_pred cc-------------------------------------------------------------------------ccHHH
Confidence 00 00011
Q ss_pred cccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcccc--------ccccccc
Q psy1056 181 VIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLEN--------SANMDLK 249 (590)
Q Consensus 181 im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~--------~~~~~~~ 249 (590)
+|..++.+ ++++.++++.| .+++++.+||+|+ +++++|++|.+|+..... ......+
T Consensus 161 ~m~~~~~~v~~~~~l~~~~~~m---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 161 FMSTKVQTIYKEVRLDQAVKLM---------LRRGFRRLPVIDD---DNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp HSBCSCCCEETTSBHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred hhcCCCeEECCCCCHHHHHHHH---------HHcCCCEEEEEcC---CCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 44444333 78899999999 9999999999997 699999999999972211 1123578
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+.++|++ +++++++++++.+|+++|.+++++++||+|++|+++|+||.+||++...
T Consensus 229 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~ 284 (296)
T 3ddj_A 229 VKDVMVT--NLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALH 284 (296)
T ss_dssp HHHHSBC--CCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHH
Confidence 9999998 9999999999999999999999999999999999999999999998754
No 24
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.80 E-value=1.2e-18 Score=190.20 Aligned_cols=270 Identities=21% Similarity=0.283 Sum_probs=188.8
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccC--CcccceeEEEEecccccccc
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTEN--GKLGEKLLGIVTSRDVDFLE 78 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~--~~~~~~lvGivT~~Did~l~ 78 (590)
+||+||+++.|..++++||+.+++|..+|+++++++|+.+|+++|.+++++++||+|+ + ++++|+||.+|+.+.
T Consensus 95 vIh~~~~~~~q~~~V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~---~~lvGiVt~rDl~~~- 170 (511)
T 3usb_A 95 IIHKNMSIEQQAEQVDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDE---RKLVGIITNRDMRFI- 170 (511)
T ss_dssp EECSSSCHHHHHHHHHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTT---CBEEEEEEHHHHTTC-
T ss_pred eecccCCHHHHHHHHHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCC---CEEEEEEEehHhhhh-
Confidence 5899999999999999999999999999999999999999999999999999999997 5 799999999954321
Q ss_pred CCCCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCC
Q psy1056 79 NSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSS 158 (590)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~ 158 (590)
.+...++.
T Consensus 171 ----------~~~~~~V~-------------------------------------------------------------- 178 (511)
T 3usb_A 171 ----------QDYSIKIS-------------------------------------------------------------- 178 (511)
T ss_dssp ----------CCSSSBHH--------------------------------------------------------------
T ss_pred ----------ccCCCcHH--------------------------------------------------------------
Confidence 01111111
Q ss_pred CCchHHHHHHHHHhhhcCCCcccccc-cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEec
Q psy1056 159 QGNSIYQIEMIKYIKKEYPDMQVIGG-NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTS 234 (590)
Q Consensus 159 ~~~~~~~~~~v~~vk~~~~~~~im~~-~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~ 234 (590)
++|+. ++.+ +.++.++++.| .++++..+||+|+ +++++|+||.
T Consensus 179 ---------------------~vM~~~~~vtv~~~~~l~eal~~m---------~~~~i~~lpVVDe---~g~l~GiIT~ 225 (511)
T 3usb_A 179 ---------------------DVMTKEQLITAPVGTTLSEAEKIL---------QKYKIEKLPLVDN---NGVLQGLITI 225 (511)
T ss_dssp ---------------------HHCCCCCCCCEETTCCHHHHHHHH---------HHHTCSEEEEECT---TSBEEEEEEH
T ss_pred ---------------------HhcccCCCEEECCCCCHHHHHHHH---------HHcCCCEEEEEeC---CCCEeeeccH
Confidence 13332 2222 67888999999 9999999999998 7999999999
Q ss_pred chhhccccccccccchhhccccCCCee--EEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCC
Q psy1056 235 RDVDFLENSANMDLKIEKVMTNVNEII--SAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSS 312 (590)
Q Consensus 235 ~Dl~~~~~~~~~~~~V~~im~~~~~~~--tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~ 312 (590)
+|+....... ..+++.+.+ .++ .+.......+.++.+.+.+.+.+.|-..++...+++ ++++...
T Consensus 226 ~Dil~~~~~p---~a~~D~~~r--l~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~---~~i~~i~----- 292 (511)
T 3usb_A 226 KDIEKVIEFP---NSAKDKQGR--LLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVI---DKVKEVR----- 292 (511)
T ss_dssp HHHHHHHHCT---TCCBCTTSC--BCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHH---HHHHHHH-----
T ss_pred HHHHHhhhcc---cchhhhccc--eeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhh---hHHHHHH-----
Confidence 9998332221 234455554 333 344444456667778889999887766555444333 2222221
Q ss_pred cccCC-ceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCc----------hhhHHHHHHHH---HHhCCCceEEe-c
Q psy1056 313 KDENN-QLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGN----------SIYQIEMIKFI---KKEYPDMQVIG-G 377 (590)
Q Consensus 313 ~d~~~-~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~----------~~~~l~~i~~i---~~~~~~vpvi~-g 377 (590)
+..+ ..++..++. ..+.+..+.++|+|.+.+....|. ....+..+..+ .+.+ ++|+|+ |
T Consensus 293 -~~~~~~~vi~g~v~----t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~-~iPVIa~G 366 (511)
T 3usb_A 293 -AKYPSLNIIAGNVA----TAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH-GIPVIADG 366 (511)
T ss_dssp -HHCTTSEEEEEEEC----SHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEES
T ss_pred -HhCCCceEEeeeec----cHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC-CCcEEEeC
Confidence 1111 123333443 346678889999999987432221 01123333333 3334 689996 8
Q ss_pred cccCcHHHHHHHHCCCCEEEE
Q psy1056 378 NVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 378 ~v~s~~~a~~l~~~Gvd~i~v 398 (590)
++.+.+++.++..+||+++-+
T Consensus 367 GI~~~~di~kala~GA~~V~v 387 (511)
T 3usb_A 367 GIKYSGDMVKALAAGAHVVML 387 (511)
T ss_dssp CCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHhCchhhee
Confidence 888999999999999999955
No 25
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.79 E-value=2.1e-19 Score=185.43 Aligned_cols=191 Identities=14% Similarity=0.180 Sum_probs=141.7
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccc--eeEEEEecccc-ccccCCCCCCCCccCCccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGE--KLLGIVTSRDV-DFLENSANMDLKIEKDLSS 93 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~--~lvGivT~~Di-d~l~~~~~~~~~~~~~~~~ 93 (590)
.+.++...|.++++++++++|+.+|++.|.+++++++||+|++..++ +++|++|.+|+ .++. ..
T Consensus 112 ~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~-~~------------ 178 (323)
T 3t4n_C 112 DIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVA-LN------------ 178 (323)
T ss_dssp HHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHH-HH------------
T ss_pred HHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHH-hc------------
Confidence 33344455899999999999999999999999999999999761111 29999999953 1110 00
Q ss_pred ccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhh
Q psy1056 94 PLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIK 173 (590)
Q Consensus 94 ~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk 173 (590)
........
T Consensus 179 -~~~~~~~~----------------------------------------------------------------------- 186 (323)
T 3t4n_C 179 -CRETHFLK----------------------------------------------------------------------- 186 (323)
T ss_dssp -CGGGGGCC-----------------------------------------------------------------------
T ss_pred -CCchhhhh-----------------------------------------------------------------------
Confidence 00000000
Q ss_pred hcCCCccc---ccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-ccc--c
Q psy1056 174 KEYPDMQV---IGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-ENS--A 244 (590)
Q Consensus 174 ~~~~~~~i---m~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~~--~ 244 (590)
.+..++ |..++.+ ++++.++++.| .+++++++||+|+ +|+++|+||.+|+... ... .
T Consensus 187 --~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m---------~~~~~~~~pVvd~---~~~~~Giit~~dl~~~~~~~~~~ 252 (323)
T 3t4n_C 187 --IPIGDLNIITQDNMKSCQMTTPVIDVIQML---------TQGRVSSVPIIDE---NGYLINVYEAYDVLGLIKGGIYN 252 (323)
T ss_dssp --SBGGGTTCSBCTTCCCBCTTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEEEEEETTHHHHHHHTTHHH
T ss_pred --CcHHHcCCCCCCCcEEECCCCcHHHHHHHH---------HHcCCCEEEEECC---CCeEEEEEeHHHHHHHHhhchhh
Confidence 011113 4444433 88999999999 9999999999998 7999999999999732 211 1
Q ss_pred ccccchhhccccCC----CeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 245 NMDLKIEKVMTNVN----EIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 245 ~~~~~V~~im~~~~----~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
....+++++|++.. +++++++++++.+|+++|.+++++++||+|++|+++|+||.+|+++..
T Consensus 253 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l 318 (323)
T 3t4n_C 253 DLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYI 318 (323)
T ss_dssp HTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred hccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHH
Confidence 23578999999633 589999999999999999999999999999999999999999999875
No 26
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.79 E-value=9.3e-19 Score=181.24 Aligned_cols=253 Identities=13% Similarity=0.165 Sum_probs=158.7
Q ss_pred cccCcc--ccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc-ccccCCCCCCC-CccCCcc-cc
Q psy1056 20 KYKHGF--IRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV-DFLENSANMDL-KIEKDLS-SP 94 (590)
Q Consensus 20 ~~~~~m--~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di-d~l~~~~~~~~-~~~~~~~-~~ 94 (590)
.++++| .++++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+|+ ..+. ...... ....++. ..
T Consensus 36 ~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~--~~~~vGivt~~Dll~~l~-~~~~~~~~~~~~l~~~~ 112 (330)
T 2v8q_E 36 RCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSK--KQSFVGMLTITDFINILH-RYYKSALVQIYELEEHK 112 (330)
T ss_dssp BGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETT--TTEEEEEEEHHHHHHHHH-HHHHHHTTTCCCGGGCB
T ss_pred cHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCC--CCeEEEEEEHHHHHHHHH-HHHhccccchhHHhhcc
Confidence 344559 8899999999999999999999999999999864 2589999999964 2111 000000 0000000 01
Q ss_pred cc------cccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecC-CCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHH
Q psy1056 95 LT------KKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIG-TREADKYRLKLLSQAGVDVVILDSSQGNSIYQIE 167 (590)
Q Consensus 95 l~------~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~-~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~ 167 (590)
+. ..++.+.++...+..++.+....+.-.....+.++.. +.. ++-+= .......
T Consensus 113 ~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~---------------~~Giv----t~~dl~~ 173 (330)
T 2v8q_E 113 IETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN---------------TLYIL----THKRILK 173 (330)
T ss_dssp HHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCC---------------EEEEE----CHHHHHH
T ss_pred HHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCc---------------EEEEE----cHHHHHH
Confidence 11 1122333333333333333222221222233444432 110 00000 0111111
Q ss_pred HHHHhhhcCCCcc----------ccc-ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEe
Q psy1056 168 MIKYIKKEYPDMQ----------VIG-GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVT 233 (590)
Q Consensus 168 ~v~~vk~~~~~~~----------im~-~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt 233 (590)
.+..-....+..+ +|+ .++.+ ++++.++++.| .+++++++||+|+ +++++|+||
T Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m---------~~~~~~~~~Vvd~---~~~l~Giit 241 (330)
T 2v8q_E 174 FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIF---------VQHRVSALPVVDE---KGRVVDIYS 241 (330)
T ss_dssp HHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHH---------HHHCCSEEEEECT---TSBEEEEEE
T ss_pred HHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHH---------HHcCCCeEEEECC---CCcEEEEEE
Confidence 1111000000001 232 34433 88999999999 9999999999997 699999999
Q ss_pred cchhhcccc-c--cccccchhhccc------cCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 234 SRDVDFLEN-S--ANMDLKIEKVMT------NVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 234 ~~Dl~~~~~-~--~~~~~~V~~im~------~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
.+|+..... . .....++.++|. + +++++++++++.+|+++|.+++++++||+|++|+++|+||..|+++
T Consensus 242 ~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~ 319 (330)
T 2v8q_E 242 KFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQ 319 (330)
T ss_dssp GGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCC--SCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred HHHHHHHHhccccccccCcHHHHHhccccccC--CCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHH
Confidence 999983322 1 113578999994 6 8999999999999999999999999999999999999999999998
Q ss_pred ccCC
Q psy1056 305 SRDY 308 (590)
Q Consensus 305 ~~~~ 308 (590)
....
T Consensus 320 ~~~~ 323 (330)
T 2v8q_E 320 ALVL 323 (330)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7653
No 27
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.77 E-value=1.3e-18 Score=181.65 Aligned_cols=162 Identities=21% Similarity=0.243 Sum_probs=126.8
Q ss_pred HHHcCCcEEEEec------CCCchh---hHHHHHHHHHHhCCCceEEeccc---cCcHHHHHHHHCCCCEEEEccccc--
Q psy1056 338 LSQAGVDVVILDS------SQGNSI---YQIEMIKFIKKEYPDMQVIGGNV---LFGYQPRATLLNFIYQIEMIKFIK-- 403 (590)
Q Consensus 338 li~~gad~i~V~~------~~G~~~---~~l~~i~~i~~~~~~vpvi~g~v---~s~~~a~~l~~~Gvd~i~v~~~~~-- 403 (590)
++++++..++++. ++|++. ++.+.++++++.+ ++||++|++ .++++|+.+.++|||+|+|+.+.+
T Consensus 146 ~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~ 224 (368)
T 3vkj_A 146 MIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL-SVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTN 224 (368)
T ss_dssp HTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC-SSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBC
T ss_pred HhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCc
Confidence 3345555555543 245553 4789999999988 799999988 699999999999999999855443
Q ss_pred -------ccC----------CCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 404 -------KEY----------PDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 404 -------~~~----------~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
|.. ..+.+||. +..++.++++.+. ++|||++|||+|+.|++|||++|||+|++|++|..+
T Consensus 225 ~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~ 302 (368)
T 3vkj_A 225 WIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP--DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 (368)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST--TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred ccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC--CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 321 12568899 8888888887654 499999999999999999999999999999988311
Q ss_pred CCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCc
Q psy1056 466 SEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQ 545 (590)
Q Consensus 466 ~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~ 545 (590)
+. +| ...+.++++.|..+|+..|+
T Consensus 303 -------------------------~~------------------------~G-------~~~v~~~l~~l~~eL~~~m~ 326 (368)
T 3vkj_A 303 -------------------------AI------------------------EG-------KESLEQFFRKIIFELKAAMM 326 (368)
T ss_dssp -------------------------HH------------------------HC-------HHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------Hh------------------------cC-------hHHHHHHHHHHHHHHHHHHH
Confidence 00 01 01277889999999999999
Q ss_pred ccCcCcHHHHHHh
Q psy1056 546 DIGAKSLSNLRAM 558 (590)
Q Consensus 546 ~~G~~~i~~l~~~ 558 (590)
++|++++.||++.
T Consensus 327 ~~G~~~i~el~~~ 339 (368)
T 3vkj_A 327 LTGSKDVDALKKT 339 (368)
T ss_dssp HTTCCBHHHHHTC
T ss_pred HhCCCCHHHhccC
Confidence 9999999999965
No 28
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.77 E-value=9e-19 Score=181.58 Aligned_cols=256 Identities=16% Similarity=0.200 Sum_probs=157.8
Q ss_pred cccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc-ccccCCCCCC--CCccC-Cc-c
Q psy1056 20 KYKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV-DFLENSANMD--LKIEK-DL-S 92 (590)
Q Consensus 20 ~~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di-d~l~~~~~~~--~~~~~-~~-~ 92 (590)
.+.++|+. +++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+|+ .++.. .+.. .+... .+ .
T Consensus 23 ~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~--~~~~vGiv~~~Dl~~~~~~-~~~~~~~~~~~~~~~~ 99 (334)
T 2qrd_G 23 TSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSE--ANKFAGLLTMADFVNVIKY-YYQSSSFPEAIAEIDK 99 (334)
T ss_dssp BGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETT--TTEEEEEECHHHHHHHHHH-HHHHCSCGGGGGGGGS
T ss_pred chhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCC--CCeEEEEEEHHHHHHHHHH-HhhccCCccHHHHHhh
Confidence 34455975 46799999999999999999999999999874 2699999999964 22210 0000 00000 00 1
Q ss_pred ccccc------ccccCCc--eeeCCCCCCchHHHHHHHHHcC--CeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCc-
Q psy1056 93 SPLTK------KITLAAP--LVSSPMDTVTESDMAIAMALCG--GIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGN- 161 (590)
Q Consensus 93 ~~l~~------~~~~~~p--iv~~~~~tv~~~~~~~~~~~~G--~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~- 161 (590)
.++.. .++...+ +...+..++.+ .+. .|...+ .+.++......+ ...++ |.
T Consensus 100 ~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~-a~~-~~~~~~~~~~~Vvd~~~~~~----------~~~~~------Giv 161 (334)
T 2qrd_G 100 FRLLGLREVERKIGAIPPETIYVHPMHSLMD-ACL-AMSKSRARRIPLIDVDGETG----------SEMIV------SVL 161 (334)
T ss_dssp CBHHHHHHHHHHHTCSCSSCCCBCTTSBHHH-HHH-HHHHSCCSEEEEEEEETTTT----------EEEEE------EEE
T ss_pred hchhhHHHHHHhhccCCCceeeeCCCCcHHH-HHH-HHHHCCceEEEEEeCCCCcC----------ccceE------EEe
Confidence 11111 1122222 22222222222 221 122222 222221100000 00000 10
Q ss_pred -hHHHHHHHHH-hh----hcCCCcc---cccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEE
Q psy1056 162 -SIYQIEMIKY-IK----KEYPDMQ---VIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLL 229 (590)
Q Consensus 162 -~~~~~~~v~~-vk----~~~~~~~---im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lv 229 (590)
.......+.. .. ...+..+ +|..++.+ ++++.++++.| .+++++++||+|+ +|+++
T Consensus 162 t~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m---------~~~~~~~~~Vvd~---~~~~~ 229 (334)
T 2qrd_G 162 TQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKML---------AEKNISAVPIVNS---EGTLL 229 (334)
T ss_dssp EHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEE
T ss_pred eHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHH---------HHcCCcEEEEEcC---CCcEE
Confidence 1111111110 00 0123334 46666554 88999999999 9999999999997 68999
Q ss_pred EEEecchhhcc-ccc--cccccchhhccccC----CCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccc
Q psy1056 230 GIVTSRDVDFL-ENS--ANMDLKIEKVMTNV----NEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDL 302 (590)
Q Consensus 230 Givt~~Dl~~~-~~~--~~~~~~V~~im~~~----~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dl 302 (590)
|+||.+|+... ... .....++.++|++. .+++++++++++.+|+++|.+++++++||+|++|+++|+||..|+
T Consensus 230 Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~di 309 (334)
T 2qrd_G 230 NVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADI 309 (334)
T ss_dssp EEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHH
T ss_pred EEEEHHHHHHHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHH
Confidence 99999999732 211 12467899999831 178999999999999999999999999999999999999999999
Q ss_pred ccccCC
Q psy1056 303 KKSRDY 308 (590)
Q Consensus 303 l~~~~~ 308 (590)
++....
T Consensus 310 l~~~~~ 315 (334)
T 2qrd_G 310 LNYIIY 315 (334)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 987653
No 29
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.76 E-value=6.1e-18 Score=183.97 Aligned_cols=270 Identities=23% Similarity=0.350 Sum_probs=163.5
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCC
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS 80 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~ 80 (590)
|||+||+++.|.+.+.+||+++++|+.+|+++++++|+.+|+++|.+++++++||+|++ ++++|+||.+|+.+..
T Consensus 71 vI~~n~s~e~qa~~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~---~~lvGiVt~rDL~~~~-- 145 (496)
T 4fxs_A 71 FIHKNMSIEQQAAQVHQVKIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTEN---NELVGIITGRDVRFVT-- 145 (496)
T ss_dssp EECSSSCHHHHHHHHHHHHHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS---SBEEEEEEHHHHTTCC--
T ss_pred eecCCCCHHHHHHHHHhccccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccC---CEEEEEEEHHHHhhcc--
Confidence 58999999999999999999999999999999999999999999999999999999976 8999999999543210
Q ss_pred CCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCC
Q psy1056 81 ANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQG 160 (590)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~ 160 (590)
+...++.
T Consensus 146 ---------~~~~~v~---------------------------------------------------------------- 152 (496)
T 4fxs_A 146 ---------DLTKSVA---------------------------------------------------------------- 152 (496)
T ss_dssp ---------CTTSBGG----------------------------------------------------------------
T ss_pred ---------cCCCcHH----------------------------------------------------------------
Confidence 1111122
Q ss_pred chHHHHHHHHHhhhcCCCccccc-c-cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecc
Q psy1056 161 NSIYQIEMIKYIKKEYPDMQVIG-G-NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSR 235 (590)
Q Consensus 161 ~~~~~~~~v~~vk~~~~~~~im~-~-~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~ 235 (590)
++|+ . ++.+ +.++.++++.| .++++..+||+|+ +|+++|+||.+
T Consensus 153 -------------------diM~p~~~~vtv~~~~~l~ea~~~m---------~~~~i~~lpVVDe---~G~l~GiIT~~ 201 (496)
T 4fxs_A 153 -------------------AVMTPKERLATVKEGATGAEVQEKM---------HKARVEKILVVND---EFQLKGMITAK 201 (496)
T ss_dssp -------------------GTSEEGGGCCEEECC----CGGGTC---------C---CCCEEEECT---TSBCCEEECCC
T ss_pred -------------------HHhcCCCCCEEECCCCCHHHHHHHH---------HHcCCCEEEEEcC---CCCEEEeehHh
Confidence 1333 1 1212 56677777888 9999999999998 79999999999
Q ss_pred hhhccccccccccchhhccccCCCeeEEc-CCCCHHHHHHHHHhcCCCcceEEcC-CCceEEEEeecccccccCCCCCCc
Q psy1056 236 DVDFLENSANMDLKIEKVMTNVNEIISAQ-AGISLEEANVILEKSKKGKLPILND-KGELIALIARTDLKKSRDYPDSSK 313 (590)
Q Consensus 236 Dl~~~~~~~~~~~~V~~im~~~~~~~tv~-~~~~l~ea~~~m~~~~~~~lpVvd~-~g~l~Giit~~dll~~~~~~~~~~ 313 (590)
|+....... ...++.-.+..-...+. ..++++.+ +.+.+.+.+.+ ++|- .+...+. .+.++...
T Consensus 202 DIl~~~~~p---~a~~d~~grL~v~aavG~~~d~~~~a-~~l~~aG~d~I-~id~a~g~~~~~---~~~i~~ir------ 267 (496)
T 4fxs_A 202 DFHKAESKP---NACKDEQGRLRVGAAVGAAPGNEERV-KALVEAGVDVL-LIDSSHGHSEGV---LQRIRETR------ 267 (496)
T ss_dssp -----CCCT---TCCBCTTSCBCCEEECCSSSCCHHHH-HHHHHTTCSEE-EEECSCTTSHHH---HHHHHHHH------
T ss_pred HHHHhhccc---chhhhcccceeeeeeeccccchHHHH-HHHHhccCceE-EeccccccchHH---HHHHHHHH------
Confidence 998432211 01111111100011222 23445554 45556677754 4432 2211000 02222211
Q ss_pred ccCCce-EEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCch----------hhHHHHHHHHHH---hCCCceEEe-cc
Q psy1056 314 DENNQL-IVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNS----------IYQIEMIKFIKK---EYPDMQVIG-GN 378 (590)
Q Consensus 314 d~~~~l-~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~----------~~~l~~i~~i~~---~~~~vpvi~-g~ 378 (590)
+..+.. ++..++. ..+.++.+.++|+|++.+....|.. ......+..+.+ .+ ++|+|+ |+
T Consensus 268 ~~~p~~~Vi~g~v~----t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~-~iPVIa~GG 342 (496)
T 4fxs_A 268 AAYPHLEIIGGNVA----TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY-GIPVIADGG 342 (496)
T ss_dssp HHCTTCCEEEEEEC----SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG-TCCEEEESC
T ss_pred HHCCCceEEEcccC----cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC-CCeEEEeCC
Confidence 111111 2222332 2466788899999999885322211 112344444444 23 689996 67
Q ss_pred ccCcHHHHHHHHCCCCEEEE
Q psy1056 379 VLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 379 v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.+.+++.++..+|||++-+
T Consensus 343 I~~~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 343 IRFSGDISKAIAAGASCVMV 362 (496)
T ss_dssp CCSHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHcCCCeEEe
Confidence 88999999999999999955
No 30
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.75 E-value=4.6e-18 Score=178.04 Aligned_cols=140 Identities=20% Similarity=0.197 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEec
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIAD 436 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~ 436 (590)
..+.++++++.+ ++|+++|++.+.++|+.+.++|+|+|.|+.+.+++ .+||. +...+.++.+.+.. ++|||++
T Consensus 217 ~~~~i~~lr~~~-~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~----~~~g~~~~~~l~~v~~~v~~-~ipVia~ 290 (368)
T 2nli_A 217 SPRDIEEIAGHS-GLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQ----LYEAPGSFDTLPAIAERVNK-RVPIVFD 290 (368)
T ss_dssp CHHHHHHHHHHS-SSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTS----CSSCCCHHHHHHHHHHHHTT-SSCEEEC
T ss_pred hHHHHHHHHHHc-CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCC----CCCCCChHHHHHHHHHHhCC-CCeEEEE
Confidence 356799999988 79999999999999999999999999998877655 35677 88888888877642 5999999
Q ss_pred CCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeec
Q psy1056 437 GGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVA 516 (590)
Q Consensus 437 GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (590)
|||+++.|++|||++|||+|++|++|. |+++..+.
T Consensus 291 GGI~~g~D~~kalalGAd~V~iGr~~l--------------------~~~~~~G~------------------------- 325 (368)
T 2nli_A 291 SGVRRGEHVAKALASGADVVALGRPVL--------------------FGLALGGW------------------------- 325 (368)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEECHHHH--------------------HHHHHHHH-------------------------
T ss_pred CCCCCHHHHHHHHHcCCCEEEECHHHH--------------------HHHHhcCh-------------------------
Confidence 999999999999999999999999883 33221111
Q ss_pred ccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 517 QGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 517 eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.++.++++.|..+|+..|.++|++++.||++.
T Consensus 326 ----------~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 357 (368)
T 2nli_A 326 ----------QGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGL 357 (368)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTC
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCcCHHHhccc
Confidence 12778899999999999999999999999986
No 31
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.75 E-value=2.2e-18 Score=177.80 Aligned_cols=246 Identities=12% Similarity=0.118 Sum_probs=167.6
Q ss_pred Ccccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc-ccccCCCCCCCCccCCccccccccc
Q psy1056 23 HGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV-DFLENSANMDLKIEKDLSSPLTKKI 99 (590)
Q Consensus 23 ~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di-d~l~~~~~~~~~~~~~~~~~l~~~~ 99 (590)
++|.. +++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+|+ +++.. . ........ .+
T Consensus 34 d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~--~~~lvGilt~~Dl~~~l~~--~------~~~~~~~~-~l 102 (323)
T 3t4n_C 34 DVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSK--TSRFAGLLTTTDFINVIQY--Y------FSNPDKFE-LV 102 (323)
T ss_dssp HHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETT--TTEEEEEECHHHHHHHHHH--H------HHCGGGGG-GG
T ss_pred hhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCC--CCeEEEEEEHHHHHHHHHH--H------HcCcchhH-HH
Confidence 35765 45689999999999999999999999999975 2599999999953 22210 0 00000000 00
Q ss_pred ccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCc
Q psy1056 100 TLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDM 179 (590)
Q Consensus 100 ~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~ 179 (590)
... ....+..+....
T Consensus 103 -----------~~~------------------------------------------------~~~~v~~i~~~~------ 117 (323)
T 3t4n_C 103 -----------DKL------------------------------------------------QLDGLKDIERAL------ 117 (323)
T ss_dssp -----------GGC------------------------------------------------BHHHHHHHHHHT------
T ss_pred -----------HHH------------------------------------------------HHHHHHHHHHHh------
Confidence 000 000111111111
Q ss_pred ccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCe-----EEEEEecchhh-ccc----ccccc
Q psy1056 180 QVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEK-----LLGIVTSRDVD-FLE----NSANM 246 (590)
Q Consensus 180 ~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~-----lvGivt~~Dl~-~~~----~~~~~ 246 (590)
.+|+.++.+ ++++.++++.| .+++++++||+++ ++. ++|++|.+|+. +.. .....
T Consensus 118 ~~~~~~~v~v~~~~~l~~a~~~m---------~~~~~~~lpVvd~---~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~ 185 (323)
T 3t4n_C 118 GVDQLDTASIHPSRPLFEACLKM---------LESRSGRIPLIDQ---DEETHREIVVSVLTQYRILKFVALNCRETHFL 185 (323)
T ss_dssp TC----CCCBCTTSBHHHHHHHH---------HHHTCSEEEEEEE---CTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGC
T ss_pred CCCCCCceEeCCCCcHHHHHHHH---------HhCCeeEEEEEec---CCCCCccceEEEecHHHHHHHHHhcCCchhhh
Confidence 145555444 88999999999 9999999999997 453 99999999997 211 12234
Q ss_pred ccchhhc---cccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCC------CCcccCC
Q psy1056 247 DLKIEKV---MTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPD------SSKDENN 317 (590)
Q Consensus 247 ~~~V~~i---m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~------~~~d~~~ 317 (590)
..+++++ |++ +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+++...... ...+...
T Consensus 186 ~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~ 263 (323)
T 3t4n_C 186 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALM 263 (323)
T ss_dssp CSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGG
T ss_pred hCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHh
Confidence 5789999 988 9999999999999999999999999999999999999999999987643221 1111111
Q ss_pred ce----EEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhH
Q psy1056 318 QL----IVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQ 358 (590)
Q Consensus 318 ~l----~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~ 358 (590)
.. .-...+....+..+.++.|.+.+...+.|...+|...|+
T Consensus 264 ~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Gi 308 (323)
T 3t4n_C 264 RRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGV 308 (323)
T ss_dssp GSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEE
T ss_pred hccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEE
Confidence 00 001234556678888999999999887776656655443
No 32
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.74 E-value=8.3e-18 Score=173.21 Aligned_cols=138 Identities=19% Similarity=0.234 Sum_probs=116.2
Q ss_pred HHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCC
Q psy1056 360 EMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGG 438 (590)
Q Consensus 360 ~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GG 438 (590)
+.++++++.+ ++|+++|.+.+.++|+.+.++|+|+|.|+.+.+++ ..+ +. +...+.++.+.+.. ++|||++||
T Consensus 207 ~~i~~lr~~~-~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~---~d~-~~~~~~~L~~i~~av~~-~ipVia~GG 280 (352)
T 3sgz_A 207 NDLSLLQSIT-RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQ---LDE-VSASIDALREVVAAVKG-KIEVYMDGG 280 (352)
T ss_dssp HHHHHHHHHC-CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTS---SCS-SCCHHHHHHHHHHHHTT-SSEEEEESS
T ss_pred HHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCc---cCC-CccHHHHHHHHHHHhCC-CCeEEEECC
Confidence 6799999998 79999999999999999999999999998887766 433 55 77788888776542 599999999
Q ss_pred CCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeeccc
Q psy1056 439 VQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQG 518 (590)
Q Consensus 439 i~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg 518 (590)
|+++.|++|||++|||+|++|++|. |+++..+.
T Consensus 281 I~~g~Dv~kaLalGA~aV~iGr~~l--------------------~~l~~~G~--------------------------- 313 (352)
T 3sgz_A 281 VRTGTDVLKALALGARCIFLGRPIL--------------------WGLACKGE--------------------------- 313 (352)
T ss_dssp CCSHHHHHHHHHTTCSEEEESHHHH--------------------HHHHHHHH---------------------------
T ss_pred CCCHHHHHHHHHcCCCEEEECHHHH--------------------HHHHhcCc---------------------------
Confidence 9999999999999999999999883 33221111
Q ss_pred ceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 519 VSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
..+.++++.|..+|+..|.++|++++.||++.
T Consensus 314 --------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~ 345 (352)
T 3sgz_A 314 --------DGVKEVLDILTAELHRCMTLSGCQSVAEISPD 345 (352)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGG
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhh
Confidence 12778899999999999999999999999865
No 33
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.72 E-value=2.7e-17 Score=178.75 Aligned_cols=271 Identities=25% Similarity=0.340 Sum_probs=91.8
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCC
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS 80 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~ 80 (590)
+||+||+++.+..++.+||+++++|..+|+++++++|+.||+++|.+++++++||+|+ ++++|+||.+|+++..
T Consensus 70 vI~~~~~~e~~a~~v~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~----g~lvGIVt~rDl~~~~-- 143 (490)
T 4avf_A 70 IIHKNMGIEQQAAEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQ----GELVGIVTGRDLRVKP-- 143 (490)
T ss_dssp EECCSSCHHHHHHHHHHHHHCCC---------------------------------------------------------
T ss_pred cccCCCCHHHHHHHhhhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEEC----CEEEEEEEhHHhhhcc--
Confidence 5899999999999999999999999999999999999999999999999999999994 6999999999543210
Q ss_pred CCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCC
Q psy1056 81 ANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQG 160 (590)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~ 160 (590)
+...++.
T Consensus 144 ---------~~~~~V~---------------------------------------------------------------- 150 (490)
T 4avf_A 144 ---------NAGDTVA---------------------------------------------------------------- 150 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------ccCCcHH----------------------------------------------------------------
Confidence 0000111
Q ss_pred chHHHHHHHHHhhhcCCCccccc-c-cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecc
Q psy1056 161 NSIYQIEMIKYIKKEYPDMQVIG-G-NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSR 235 (590)
Q Consensus 161 ~~~~~~~~v~~vk~~~~~~~im~-~-~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~ 235 (590)
++|+ . ++.+ ++++.++++.| .++++..+||+|+ +++++|+||.+
T Consensus 151 -------------------~vMtp~~~~vtv~~~~~l~ea~~~m---------~~~~i~~lpVVDe---~g~lvGiIT~~ 199 (490)
T 4avf_A 151 -------------------AIMTPKDKLVTAREGTPLEEMKAKL---------YENRIEKMLVVDE---NFYLRGLVTFR 199 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------HHhccCCCCEEECCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCcEEEEEehH
Confidence 1333 1 1222 77888999999 9999999999998 79999999999
Q ss_pred hhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEc-CCCceEEEEeecccccccCCCCCCcc
Q psy1056 236 DVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILN-DKGELIALIARTDLKKSRDYPDSSKD 314 (590)
Q Consensus 236 Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd-~~g~l~Giit~~dll~~~~~~~~~~d 314 (590)
|+....... ...++.-.+..-...+.......+..+.+.+.+.+.+ ++| ..+...+ ..+.++... +
T Consensus 200 Dil~~~~~p---~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~I-~id~a~g~~~~---~~~~v~~i~------~ 266 (490)
T 4avf_A 200 DIEKAKTYP---LASKDEQGRLRVGAAVGTGADTGERVAALVAAGVDVV-VVDTAHGHSKG---VIERVRWVK------Q 266 (490)
T ss_dssp -------CT---TCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEE-EEECSCCSBHH---HHHHHHHHH------H
T ss_pred HhhhhccCc---chhhhccCcceeeeeeccccchHHHHHHHhhcccceE-EecccCCcchh---HHHHHHHHH------H
Confidence 998432211 0011111110011223333344455556667787754 443 2222100 012222211 1
Q ss_pred cCCc-eEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCch----------hhHHHHHHHHHHhC--CCceEEe-cccc
Q psy1056 315 ENNQ-LIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNS----------IYQIEMIKFIKKEY--PDMQVIG-GNVL 380 (590)
Q Consensus 315 ~~~~-l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~----------~~~l~~i~~i~~~~--~~vpvi~-g~v~ 380 (590)
..+. .++..++. ..+.+..+.++|+|++.+-...|.. ...++.+..+.+.. .++|+|+ |++.
T Consensus 267 ~~p~~~Vi~g~v~----t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~ 342 (490)
T 4avf_A 267 TFPDVQVIGGNIA----TAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIR 342 (490)
T ss_dssp HCTTSEEEEEEEC----SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCC
T ss_pred HCCCceEEEeeeC----cHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCC
Confidence 1112 12222332 3466788999999999883222211 11345555555532 1689995 7788
Q ss_pred CcHHHHHHHHCCCCEEEE
Q psy1056 381 FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v 398 (590)
+.+++.++.++|||++-+
T Consensus 343 ~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 343 FSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp SHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHcCCCeeee
Confidence 999999999999999966
No 34
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.70 E-value=4.3e-17 Score=152.40 Aligned_cols=118 Identities=21% Similarity=0.264 Sum_probs=104.2
Q ss_pred CCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcccc----------
Q psy1056 176 YPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLEN---------- 242 (590)
Q Consensus 176 ~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~---------- 242 (590)
.+..++|+.++.+ ++++.+|++.| .+++++++||+|+ +|+++|+||.+|+.....
T Consensus 18 ~~V~diM~~~v~~v~~~~tl~~a~~~m---------~~~~~~~~pVvd~---~g~lvGiit~~Dll~~~~~~~~~~~~~~ 85 (170)
T 4esy_A 18 VPIRDILTSPVVTVREDDTLDAVAKTM---------LEHQIGCAPVVDQ---NGHLVGIITESDFLRGSIPFWIYEASEI 85 (170)
T ss_dssp SBGGGGCCSCCCCEETTSBHHHHHHHH---------HHTTCSEEEEECT---TSCEEEEEEGGGGGGGTCCTTHHHHHHH
T ss_pred CCHHHhcCCCCcEECCcCcHHHHHHHH---------HHcCCeEEEEEcC---CccEEEEEEHHHHHHHHhhccccchhhh
Confidence 7777899998877 99999999999 9999999999998 799999999999972211
Q ss_pred --------------ccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 243 --------------SANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 243 --------------~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
......+++++|++ +++++++++++.+|+++|.+++++++||+| +|+++|+||++||++.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 86 LSRAIPAPEVEHLFETGRKLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HTTTSCHHHHHHHHHHHTTCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCC
T ss_pred hhhccchhhHHhhhccccccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 01124689999999 999999999999999999999999999998 5999999999999998654
No 35
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.70 E-value=3e-17 Score=179.29 Aligned_cols=276 Identities=19% Similarity=0.184 Sum_probs=96.8
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCC
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS 80 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~ 80 (590)
+||+|++++++...+.+|+..+.+|+++++++++++|+.+|+++|.+++++++||+|++...++++|+||.+|+....
T Consensus 79 ~I~~~~~~e~~~~~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~-- 156 (503)
T 1me8_A 79 FIFGSQSIESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPIDL-- 156 (503)
T ss_dssp EECCSSCHHHHHHHHHHHHTTTC---------------------------------------------------------
T ss_pred eeeCCCCHHHHHHHHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhhh--
Confidence 589999999999999999999777999999999999999999999999999999998621115999999999432210
Q ss_pred CCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCC
Q psy1056 81 ANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQG 160 (590)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~ 160 (590)
.+...
T Consensus 157 --------~~~~~------------------------------------------------------------------- 161 (503)
T 1me8_A 157 --------TQTET------------------------------------------------------------------- 161 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------ccccC-------------------------------------------------------------------
Confidence 00000
Q ss_pred chHHHHHHHHHhhhcCCCccccccc--ccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecc
Q psy1056 161 NSIYQIEMIKYIKKEYPDMQVIGGN--VVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSR 235 (590)
Q Consensus 161 ~~~~~~~~v~~vk~~~~~~~im~~~--~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~ 235 (590)
+..++|+.+ +.+ ++++.++++.| .+++++.+||+|+ +++++|+||.+
T Consensus 162 ----------------~V~diM~~~~~~~tv~~~~sl~ea~~~m---------~~~~i~~lpVVDe---~g~lvGiIT~~ 213 (503)
T 1me8_A 162 ----------------KVSDMMTPFSKLVTAHQDTKLSEANKII---------WEKKLNALPIIDD---DQHLRYIVFRK 213 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------cHHHHhCCCCCCEEEcCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCeEEEEEEec
Confidence 001144432 222 78899999999 9999999999998 79999999999
Q ss_pred hhhccccccc-cccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcc
Q psy1056 236 DVDFLENSAN-MDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKD 314 (590)
Q Consensus 236 Dl~~~~~~~~-~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d 314 (590)
|+........ ...+...+|. ...+.. ....+..+.|.+.+++.++|--.+|...|+++.-+.++...
T Consensus 214 Dil~~~~~~~~~~d~~~~l~v----~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~------- 281 (503)
T 1me8_A 214 DYDRSQVCHNELVDSQKRYLV----GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKY------- 281 (503)
T ss_dssp --------CCCCBCTTSCBCC----EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHH-------
T ss_pred HHHHhhhcccchhcccccccc----ccccCc-hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhC-------
Confidence 9983221110 1111222222 123445 66667788899999987655334455555443333333211
Q ss_pred cC-CceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCc----h------hhHHHHHHHHHHhC--------CCceEE
Q psy1056 315 EN-NQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGN----S------IYQIEMIKFIKKEY--------PDMQVI 375 (590)
Q Consensus 315 ~~-~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~----~------~~~l~~i~~i~~~~--------~~vpvi 375 (590)
.. .. ++..++. ..+.+..+.++|++++.+....|. + ...+..+..+.+.. .++|+|
T Consensus 282 ~~~~~-Vi~G~V~----t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvi 356 (503)
T 1me8_A 282 GDKVK-VGAGNIV----DGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVC 356 (503)
T ss_dssp GGGSC-EEEEEEC----SHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEE
T ss_pred CCCce-Eeecccc----CHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEE
Confidence 01 12 2222332 245677888999999988332221 1 11233333332221 148888
Q ss_pred e-ccccCcHHHHHHHHCCCCEEEE
Q psy1056 376 G-GNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 376 ~-g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+ |++.+..++.+++.+||+++-+
T Consensus 357 a~GGi~~~~di~kAlalGA~~V~i 380 (503)
T 1me8_A 357 SDGGIVYDYHMTLALAMGADFIML 380 (503)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEE
T ss_pred EeCCCCCHHHHHHHHHcCCCEEEE
Confidence 5 7888999999999999999966
No 36
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.70 E-value=1.6e-17 Score=174.96 Aligned_cols=156 Identities=14% Similarity=0.187 Sum_probs=116.9
Q ss_pred HHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecC
Q psy1056 359 IEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 359 l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~G 437 (590)
.+.++++++.+ ++|+++|++.+.++|+.+.++|+|+|.|+.+.++. + +||. +...+.++.+.+ +.|||++|
T Consensus 214 ~~~i~~i~~~~-~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~---~-d~~~~~~~~l~~v~~~~---~~pVia~G 285 (380)
T 1p4c_A 214 WEALRWLRDLW-PHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQ---L-DCAISPMEVLAQSVAKT---GKPVLIDS 285 (380)
T ss_dssp HHHHHHHHHHC-CSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTS---C-TTCCCGGGTHHHHHHHH---CSCEEECS
T ss_pred HHHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCc---C-CCCcCHHHHHHHHHHHc---CCeEEEEC
Confidence 57899999998 79999999999999999999999999997766554 3 4567 888888887665 35999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQ 517 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~e 517 (590)
||+++.|++|+|++|||+|++|++|. +|++..+.
T Consensus 286 GI~~~~dv~kal~~GAdaV~iGr~~l--------------------~~~~~~g~-------------------------- 319 (380)
T 1p4c_A 286 GFRRGSDIVKALALGAEAVLLGRATL--------------------YGLAARGE-------------------------- 319 (380)
T ss_dssp SCCSHHHHHHHHHTTCSCEEESHHHH--------------------HHHHHHHH--------------------------
T ss_pred CCCCHHHHHHHHHhCCcHhhehHHHH--------------------HHHHhcCH--------------------------
Confidence 99999999999999999999999882 33211100
Q ss_pred cceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHhhccCceEEEEEecCccccCCCCcccccc
Q psy1056 518 GVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAMMYSGELKFEKRTLCAQNEGSVHGLYSYE 586 (590)
Q Consensus 518 g~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~~~~e~~~h~~~~~~ 586 (590)
.++.+.++.+..+|+..|.++|++++.||++.. . ..+++.|+++||+..+.
T Consensus 320 ---------~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~-------l--~~~g~~~~~~~d~~~~~ 370 (380)
T 1p4c_A 320 ---------TGVDEVLTLLKADIDRTLAQIGCPDITSLSPDY-------L--QNEGVTNTAPVDHLIGK 370 (380)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGG-------E--EEC--------------
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCe-------E--EecccccccCccccccc
Confidence 127788999999999999999999999999861 2 23577899999987553
No 37
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.69 E-value=1.8e-17 Score=174.63 Aligned_cols=140 Identities=20% Similarity=0.243 Sum_probs=116.2
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEec
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIAD 436 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~ 436 (590)
..+.++++++.+ ++|+++|++.+.++|+.+.++|+|+|.|+.+.+++ .+||. +...+.++.+.+.. ++|||++
T Consensus 240 ~~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~----~~~g~~~~~~l~~v~~av~~-~ipVia~ 313 (392)
T 2nzl_A 240 SWEDIKWLRRLT-SLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQ----LDGVPATIDVLPEIVEAVEG-KVEVFLD 313 (392)
T ss_dssp CHHHHHHHC--C-CSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTS----STTCCCHHHHHHHHHHHHTT-SSEEEEC
T ss_pred HHHHHHHHHHhh-CCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCc----CCCCcChHHHHHHHHHHcCC-CCEEEEE
Confidence 356699999988 79999999999999999999999999998777655 35677 88888888876642 5999999
Q ss_pred CCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeec
Q psy1056 437 GGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVA 516 (590)
Q Consensus 437 GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (590)
|||+++.|++|||++|||+|++|++|. |+++..+.
T Consensus 314 GGI~~g~Dv~kalalGAd~V~iGr~~l--------------------~~~~~~g~------------------------- 348 (392)
T 2nzl_A 314 GGVRKGTDVLKALALGAKAVFVGRPIV--------------------WGLAFQGE------------------------- 348 (392)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEECHHHH--------------------HHHHHHHH-------------------------
T ss_pred CCCCCHHHHHHHHHhCCCeeEECHHHH--------------------HHHHhcCh-------------------------
Confidence 999999999999999999999999883 33322111
Q ss_pred ccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 517 QGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 517 eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.++.++++.+..+|+..|.++|++++.||++.
T Consensus 349 ----------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~ 380 (392)
T 2nzl_A 349 ----------KGVQDVLEILKEEFRLAMALSGCQNVKVIDKT 380 (392)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGG
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhh
Confidence 12677899999999999999999999999876
No 38
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.68 E-value=8.9e-17 Score=174.85 Aligned_cols=140 Identities=16% Similarity=0.163 Sum_probs=116.0
Q ss_pred HHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhc----CCCcE
Q psy1056 359 IEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASR----RGVPV 433 (590)
Q Consensus 359 l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~----~~v~i 433 (590)
.+.++++++.+ ++|+++|++.+.++|+.+.++|||+|.|+.+.+++ + +.+. +...+.++.+.+.. .++||
T Consensus 332 ~~~i~~lr~~~-~~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~---~-d~~~~~~~~l~~v~~~v~~~~~~~~ipV 406 (511)
T 1kbi_A 332 WKDIEELKKKT-KLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQ---L-DFSRAPIEVLAETMPILEQRNLKDKLEV 406 (511)
T ss_dssp HHHHHHHHHHC-SSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTS---S-TTCCCHHHHHHHHHHHHHTTTCBTTBEE
T ss_pred HHHHHHHHHHh-CCcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCcc---C-CCCCchHHHHHHHHHHHHhhccCCCcEE
Confidence 46789999988 79999999999999999999999999998776665 3 2344 66677788777642 25999
Q ss_pred EecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccce
Q psy1056 434 IADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKL 513 (590)
Q Consensus 434 ia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~ 513 (590)
|++|||+++.|++|||++|||+|++|++|. |+++..+.
T Consensus 407 ia~GGI~~g~Dv~kaLalGAdaV~iGr~~l--------------------~~~~~~G~---------------------- 444 (511)
T 1kbi_A 407 FVDGGVRRGTDVLKALCLGAKGVGLGRPFL--------------------YANSCYGR---------------------- 444 (511)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEECHHHH--------------------HHHHHHHH----------------------
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEECHHHH--------------------HHHHhcCh----------------------
Confidence 999999999999999999999999999883 33322111
Q ss_pred eecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 514 KVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 514 ~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.++.++++.+..+|+..|.++|++++.||++.
T Consensus 445 -------------~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~ 476 (511)
T 1kbi_A 445 -------------NGVEKAIEILRDEIEMSMRLLGVTSIAELKPD 476 (511)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGG
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHH
Confidence 12677899999999999999999999999877
No 39
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.67 E-value=4.3e-16 Score=154.41 Aligned_cols=78 Identities=18% Similarity=0.327 Sum_probs=59.3
Q ss_pred EEEEEecchhhccccccccccchhhccc-cCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 228 LLGIVTSRDVDFLENSANMDLKIEKVMT-NVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 228 lvGivt~~Dl~~~~~~~~~~~~V~~im~-~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
+..+.|..|............+++++|+ + +++++++++++.+|+++|.+++++++||+|++|+++|+||.+|+++..
T Consensus 165 ~~~i~t~~d~~~~~~~~~~~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 165 ITVITTPHDSFTASRLIVQSLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp CEEEECSSCHHHHHHHGGGGSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred CeEEEeCCChHHHHHHHhcCCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 3456666676532222234588999999 6 999999999999999999999999999999999999999999999864
Q ss_pred C
Q psy1056 307 D 307 (590)
Q Consensus 307 ~ 307 (590)
.
T Consensus 243 ~ 243 (245)
T 3l2b_A 243 K 243 (245)
T ss_dssp -
T ss_pred h
Confidence 3
No 40
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.65 E-value=3.7e-16 Score=164.08 Aligned_cols=139 Identities=19% Similarity=0.224 Sum_probs=115.7
Q ss_pred HHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecC
Q psy1056 359 IEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 359 l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~G 437 (590)
.+.++++++.+ ++|+++|.+.+.++++.+.++|+|+|.|+.+.++. . +++. +...+.++.+.... ++|||++|
T Consensus 214 ~~~i~~l~~~~-~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~---~-~~~~~~~~~l~~v~~~~~~-~ipvia~G 287 (370)
T 1gox_A 214 WKDVAWLQTIT-SLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQ---L-DYVPATIMALEEVVKAAQG-RIPVFLDG 287 (370)
T ss_dssp HHHHHHHHHHC-CSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTS---S-TTCCCHHHHHHHHHHHTTT-SSCEEEES
T ss_pred HHHHHHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCcc---C-CCcccHHHHHHHHHHHhCC-CCEEEEEC
Confidence 46788999988 79999999999999999999999999998777765 3 3455 77777777765432 59999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQ 517 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~e 517 (590)
||+++.|+.|+|++|||+|++|++| +||++..+.
T Consensus 288 GI~~~~D~~k~l~~GAdaV~iGr~~--------------------l~~~~~~G~-------------------------- 321 (370)
T 1gox_A 288 GVRRGTDVFKALALGAAGVFIGRPV--------------------VFSLAAEGE-------------------------- 321 (370)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHH--------------------HHHHHHHHH--------------------------
T ss_pred CCCCHHHHHHHHHcCCCEEeecHHH--------------------HHHHhhccH--------------------------
Confidence 9999999999999999999999988 244331110
Q ss_pred cceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 518 GVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 518 g~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
..+.++++.+..+|+..|.++|++++.||++.
T Consensus 322 ---------~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~ 353 (370)
T 1gox_A 322 ---------AGVKKVLQMMRDEFELTMALSGCRSLKEISRS 353 (370)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGG
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhCCCCHHHhhhc
Confidence 12777899999999999999999999999987
No 41
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.65 E-value=5.1e-16 Score=169.76 Aligned_cols=273 Identities=21% Similarity=0.290 Sum_probs=92.9
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCC
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS 80 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~ 80 (590)
+||++++++++...+.+|++++++|+++++++++++|+.+|+++|.+++++++||+|++ ++++|+||.+|+....
T Consensus 77 ~i~~~~~~e~~~~~v~~v~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~---~~lvGivt~~Dl~~~~-- 151 (494)
T 1vrd_A 77 IIHKNLTPDEQARQVSIVKKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE---GRLVGLLTNRDVRFEK-- 151 (494)
T ss_dssp EECSSSCHHHHHHHHHHHHTC-----------------------------------------------------------
T ss_pred EEecCCChHHHHHHHHhhhhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC---CEEEEEEEHHHHHhhc--
Confidence 47999999999999999999999999999999999999999999999999999999976 7999999999432210
Q ss_pred CCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCC
Q psy1056 81 ANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQG 160 (590)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~ 160 (590)
+...++
T Consensus 152 ---------~~~~~v----------------------------------------------------------------- 157 (494)
T 1vrd_A 152 ---------NLSKKI----------------------------------------------------------------- 157 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------CCCCcH-----------------------------------------------------------------
Confidence 000000
Q ss_pred chHHHHHHHHHhhhcCCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecc
Q psy1056 161 NSIYQIEMIKYIKKEYPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSR 235 (590)
Q Consensus 161 ~~~~~~~~v~~vk~~~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~ 235 (590)
.++|+. ++.+ ++++.++++.| .++++..+||+|+ +++++|+||..
T Consensus 158 ------------------~~im~~~~~~~~v~~~~~l~ea~~~m---------~~~~~~~lpVVd~---~g~lvGiIt~~ 207 (494)
T 1vrd_A 158 ------------------KDLMTPREKLIVAPPDISLEKAKEIL---------HQHRIEKLPLVSK---DNKLVGLITIK 207 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------HHHhCCCCCCeEECCCCCHHHHHHHH---------HHcCCcEEEEEcC---CCeEEEEEEHH
Confidence 013332 2222 77888999999 9999999999998 79999999999
Q ss_pred hhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCccc
Q psy1056 236 DVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDE 315 (590)
Q Consensus 236 Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~ 315 (590)
|+....... ...++...+..--.-+.......+.+..+.+.+++.+.+--..|...+ ..+.++...... .
T Consensus 208 Dll~~~~~~---~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~---~~e~i~~i~~~~----p 277 (494)
T 1vrd_A 208 DIMSVIEHP---NAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRR---VIETLEMIKADY----P 277 (494)
T ss_dssp -CHHHHTCT---TCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHH---HHHHHHHHHHHC----T
T ss_pred HHHhhhccc---cccccchhhhccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHH---HHHHHHHHHHHC----C
Confidence 998322111 111111110000012334456677888888888887655222232110 112222211100 0
Q ss_pred CCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCc----------hhhHHHHHHHHHH---hCCCceEEe-ccccC
Q psy1056 316 NNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGN----------SIYQIEMIKFIKK---EYPDMQVIG-GNVLF 381 (590)
Q Consensus 316 ~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~----------~~~~l~~i~~i~~---~~~~vpvi~-g~v~s 381 (590)
.-.+.++ +. ...+.+..+.++|+|++.+....|. .......+..+++ .. ++|+++ |++.+
T Consensus 278 ~~pvi~g-~~----~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~-~ipvia~GGI~~ 351 (494)
T 1vrd_A 278 DLPVVAG-NV----ATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKY-DVPIIADGGIRY 351 (494)
T ss_dssp TSCEEEE-EE----CSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTT-TCCEEEESCCCS
T ss_pred CceEEeC-Cc----CCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhc-CCCEEEECCcCC
Confidence 1111222 22 2245567888999999998432220 0012233333333 33 689985 88889
Q ss_pred cHHHHHHHHCCCCEEEE
Q psy1056 382 GYQPRATLLNFIYQIEM 398 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v 398 (590)
.+++.+++.+|||++-+
T Consensus 352 ~~di~kala~GAd~V~i 368 (494)
T 1vrd_A 352 SGDIVKALAAGAESVMV 368 (494)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999965
No 42
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.64 E-value=5.9e-16 Score=160.49 Aligned_cols=158 Identities=21% Similarity=0.216 Sum_probs=120.7
Q ss_pred cCCcEEEEecC-------CCchh--hHHHHHHHHHHhCCCceEEeccc---cCcHHHHHHHHCCCCEEEEccccc-----
Q psy1056 341 AGVDVVILDSS-------QGNSI--YQIEMIKFIKKEYPDMQVIGGNV---LFGYQPRATLLNFIYQIEMIKFIK----- 403 (590)
Q Consensus 341 ~gad~i~V~~~-------~G~~~--~~l~~i~~i~~~~~~vpvi~g~v---~s~~~a~~l~~~Gvd~i~v~~~~~----- 403 (590)
.+++.+.++.. .++.. .+.+.++++++ + ++|+++|++ .+.++|+.+.++|+|+|+|+.+.+
T Consensus 144 ~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~ 221 (332)
T 1vcf_A 144 LEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP-L-PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWAR 221 (332)
T ss_dssp HTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS-C-SSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHH
T ss_pred cCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc-C-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchh
Confidence 35676655542 23332 35788999999 7 899999988 799999999999999998865432
Q ss_pred ----ccC-----CCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceE
Q psy1056 404 ----KEY-----PDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYF 473 (590)
Q Consensus 404 ----~~~-----~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~ 473 (590)
+.. .-+.+||. +...+.++++.+. ++|||++|||+++.|++|||++|||+|++|++|..
T Consensus 222 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~--------- 290 (332)
T 1vcf_A 222 VEEWVRFGEVRHPELCEIGIPTARAILEVREVLP--HLPLVASGGVYTGTDGAKALALGADLLAVARPLLR--------- 290 (332)
T ss_dssp HHHTC--------CCTTCSCBHHHHHHHHHHHCS--SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHH---------
T ss_pred HHHhhccccchhhhHhhccccHHHHHHHHHHhcC--CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHH---------
Confidence 320 00156777 7777777776543 59999999999999999999999999999998841
Q ss_pred eecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHH
Q psy1056 474 FSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLS 553 (590)
Q Consensus 474 ~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~ 553 (590)
++ . +|. ..+.++++.+..+|+..|.++|+++++
T Consensus 291 -----------~~------~-----------------------~G~-------~gv~~~~~~l~~el~~~m~~~G~~~i~ 323 (332)
T 1vcf_A 291 -----------PA------L-----------------------EGA-------ERVAAWIGDYLEELRTALFAIGARNPK 323 (332)
T ss_dssp -----------HH------T-----------------------TCH-------HHHHHHHHHHHHHHHHHHHHHTCSSGG
T ss_pred -----------HH------h-----------------------ccH-------HHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 11 0 010 127788999999999999999999999
Q ss_pred HHHHh
Q psy1056 554 NLRAM 558 (590)
Q Consensus 554 ~l~~~ 558 (590)
||++.
T Consensus 324 el~~~ 328 (332)
T 1vcf_A 324 EARGR 328 (332)
T ss_dssp GGTTC
T ss_pred HHhhh
Confidence 99875
No 43
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.64 E-value=1.1e-15 Score=159.66 Aligned_cols=165 Identities=18% Similarity=0.185 Sum_probs=122.2
Q ss_pred HHHHHcCCcEEEEecCC--------Cchh--hHHHHHHHHHHhCCCceEEeccc---cCcHHHHHHHHCCCCEEEEcccc
Q psy1056 336 KLLSQAGVDVVILDSSQ--------GNSI--YQIEMIKFIKKEYPDMQVIGGNV---LFGYQPRATLLNFIYQIEMIKFI 402 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~--------G~~~--~~l~~i~~i~~~~~~vpvi~g~v---~s~~~a~~l~~~Gvd~i~v~~~~ 402 (590)
..+...|++.+.++... |+.. .+.+.++++++.+ ++|+++|.+ .+.++|+.+.++|+|+|.++.+.
T Consensus 134 ~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~-~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~g 212 (349)
T 1p0k_A 134 EAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV-SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYG 212 (349)
T ss_dssp HHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC-SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC--
T ss_pred HHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCC
Confidence 34556789998887542 2322 3678899999888 799999866 78999999999999999886543
Q ss_pred c---------ccCC---Ccccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCC
Q psy1056 403 K---------KEYP---DMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAP 469 (590)
Q Consensus 403 ~---------~~~~---~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~ 469 (590)
+ +..+ .+.+||. +...+.++++.+ .++|||++|||+++.|+.|++++|||+|++|++|....+
T Consensus 213 gt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~--~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~-- 288 (349)
T 1p0k_A 213 GTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF--PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALT-- 288 (349)
T ss_dssp -------------CCGGGGTTCSCCHHHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH--
T ss_pred CcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc--CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh--
Confidence 2 3200 0145677 777777776543 269999999999999999999999999999998831110
Q ss_pred CceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCc
Q psy1056 470 GEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGA 549 (590)
Q Consensus 470 ~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~ 549 (590)
+ +|. ..+.+.++.+..+|+..|.++|+
T Consensus 289 ---------------------~-------------------------~g~-------~~~~~~~~~~~~~l~~~m~~~G~ 315 (349)
T 1p0k_A 289 ---------------------D-------------------------SGE-------EGLLEEIQLILEELKLIMTVLGA 315 (349)
T ss_dssp ---------------------H-------------------------HHH-------HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------h-------------------------cCH-------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 0 010 12667799999999999999999
Q ss_pred CcHHHHHHh
Q psy1056 550 KSLSNLRAM 558 (590)
Q Consensus 550 ~~i~~l~~~ 558 (590)
.++.||++.
T Consensus 316 ~~i~el~~~ 324 (349)
T 1p0k_A 316 RTIADLQKA 324 (349)
T ss_dssp CBHHHHTTC
T ss_pred CCHHHHhhC
Confidence 999999976
No 44
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.63 E-value=2.8e-16 Score=152.63 Aligned_cols=158 Identities=8% Similarity=0.068 Sum_probs=101.7
Q ss_pred cccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccccccccccchhhccc
Q psy1056 179 MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMT 255 (590)
Q Consensus 179 ~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~ 255 (590)
.++|..++.+ ++++.+|++.| .+++++++||+|+ +++++|+||.+|+..... ..+++++|+
T Consensus 16 ~~~~~~~~~~v~~~~tv~ea~~~m---------~~~~~~~~pVvd~---~~~l~Givt~~dl~~~~~----~~~v~~im~ 79 (213)
T 1vr9_A 16 KKWVTQDFPMVEESATVRECLHRM---------RQYQTNECIVKDR---EGHFRGVVNKEDLLDLDL----DSSVFNKVS 79 (213)
T ss_dssp GGGCBSCSCEEETTCBHHHHHHHH---------HHTTSSEEEEECT---TSBEEEEEEGGGGTTSCT----TSBSGGGCB
T ss_pred HHhhcCCCeEECCCCcHHHHHHHH---------HHCCCCEEEEEcC---CCEEEEEEEHHHHHhhcC----CCcHHHHcc
Confidence 3477777665 88999999999 9999999999997 699999999999984432 468999999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHH
Q psy1056 256 NVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRL 335 (590)
Q Consensus 256 ~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~ 335 (590)
+ +++++++++++.+|+++|.+++++++||+|++|+++|+||.+|+++.........+...++.+... .......+.+
T Consensus 80 ~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~~~ 156 (213)
T 1vr9_A 80 L--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALAMDVPGIRFSVLLE-DKPGELRKVV 156 (213)
T ss_dssp C--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC------------------------
T ss_pred C--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhcCCCCcEEEEEEeC-CCCccHHHHH
Confidence 8 999999999999999999999999999999889999999999999876644433333344332211 1122355678
Q ss_pred HHHHHcCCcEEEEecCCCch
Q psy1056 336 KLLSQAGVDVVILDSSQGNS 355 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~G~~ 355 (590)
+.|.+++++.+.|.+.+|+.
T Consensus 157 ~~l~~~~~~~l~V~~~~~~~ 176 (213)
T 1vr9_A 157 DALALSNINILSVITTRSGD 176 (213)
T ss_dssp --------------------
T ss_pred HHHHHCCCcEEEEEEEecCC
Confidence 88999999999988877754
No 45
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.63 E-value=4.6e-16 Score=170.77 Aligned_cols=270 Identities=27% Similarity=0.407 Sum_probs=153.0
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccC---CcccceeEEEEeccccccc
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTEN---GKLGEKLLGIVTSRDVDFL 77 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~---~~~~~~lvGivT~~Did~l 77 (590)
+||.|+|++.+...+++|++++++|.++|+++++++|+.+|+++|.+++++.+||+|+ + ++++|+||.+|+...
T Consensus 90 ii~~~~t~e~~~~~v~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~---~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 90 FIHHNCTPEFQANEVRKVKNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMG---SKLVGIVTSRDIDFL 166 (514)
T ss_dssp EECCSSCHHHHHHHHHHHHTCCTTSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC--
T ss_pred EEecCCCHHHHHHHHHhhhhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcC---CEEEEEEEHHHHHhh
Confidence 4789999999999999999999999999999999999999999999999999999997 4 699999999954321
Q ss_pred cCCCCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcC
Q psy1056 78 ENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDS 157 (590)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~ 157 (590)
. + .+...+
T Consensus 167 ~-~--------~~~~~~--------------------------------------------------------------- 174 (514)
T 1jcn_A 167 A-E--------KDHTTL--------------------------------------------------------------- 174 (514)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred h-h--------ccCCCC---------------------------------------------------------------
Confidence 0 0 000000
Q ss_pred CCCchHHHHHHHHHhhhcCCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEE
Q psy1056 158 SQGNSIYQIEMIKYIKKEYPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIV 232 (590)
Q Consensus 158 ~~~~~~~~~~~v~~vk~~~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGiv 232 (590)
..++|+. ++.+ ++++.++++.| .++++..+||+|+ +++++|+|
T Consensus 175 --------------------v~~vm~~~~~~~tv~~~~~l~ea~~~m---------~~~~~~~lpVVd~---~g~lvGiI 222 (514)
T 1jcn_A 175 --------------------LSEVMTPRIELVVAPAGVTLKEANEIL---------QRSKKGKLPIVND---CDELVAII 222 (514)
T ss_dssp --------------------------CCBCCCCEETTCCSTTTTTHH---------HHHTCSCCCEESS---SSCCC---
T ss_pred --------------------HHHHhCCCCCCeEECCCCCHHHHHHHH---------HHcCCCcccEECC---CCeEEEEE
Confidence 0113433 3333 67778888888 8899999999998 79999999
Q ss_pred ecchhhccccccccccchhhccccCCCee---EEcCCCCHHHHHHHHHhcCCCcceEEcC-CCceEEEEeecccccccCC
Q psy1056 233 TSRDVDFLENSANMDLKIEKVMTNVNEII---SAQAGISLEEANVILEKSKKGKLPILND-KGELIALIARTDLKKSRDY 308 (590)
Q Consensus 233 t~~Dl~~~~~~~~~~~~V~~im~~~~~~~---tv~~~~~l~ea~~~m~~~~~~~lpVvd~-~g~l~Giit~~dll~~~~~ 308 (590)
|.+|+....... ....+ +.. .+. .+.......+..+.+.+.+.+.+-+ |- .|.... ..++++...
T Consensus 223 t~~Dll~~~~~~---~~~~~-~~~--rl~vga~vG~~~~~~~~a~~~~~aG~d~v~i-~~~~G~~~~---~~~~i~~i~- 291 (514)
T 1jcn_A 223 ARTDLKKNRDYP---LASKD-SQK--QLLCGAAVGTREDDKYRLDLLTQAGVDVIVL-DSSQGNSVY---QIAMVHYIK- 291 (514)
T ss_dssp -CCCCSSCCCCT---TCCBC-TTS--CBCCEEEECSSTTHHHHHHHHHHTTCSEEEE-CCSCCCSHH---HHHHHHHHH-
T ss_pred EHHHHHHHhhCc---chhcc-cCC--ceeeeeEecCchhhHHHHHHHHHcCCCEEEe-eccCCcchh---HHHHHHHHH-
Confidence 999998332211 11112 222 222 2333344566677788888875543 22 222100 012232221
Q ss_pred CCCCcccCCceEEeE-eeccchhHHHHHHHHHHcCCcEEEEecCCC------------c-hhhHHHHHHHHHHhCCCceE
Q psy1056 309 PDSSKDENNQLIVGA-AIGTREADKNRLKLLSQAGVDVVILDSSQG------------N-SIYQIEMIKFIKKEYPDMQV 374 (590)
Q Consensus 309 ~~~~~d~~~~l~v~a-~i~~~~~~~e~~~~li~~gad~i~V~~~~G------------~-~~~~l~~i~~i~~~~~~vpv 374 (590)
+..+...+.. ++ ...+.+..+.++|+|.+.+....| . ....+..+..+++.+ ++|+
T Consensus 292 -----~~~~~~pvi~~~v----~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-~ipV 361 (514)
T 1jcn_A 292 -----QKYPHLQVIGGNV----VTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF-GVPI 361 (514)
T ss_dssp -----HHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG-TCCE
T ss_pred -----HhCCCCceEeccc----chHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC-CCCE
Confidence 1111222222 33 234668888999999998832111 1 122356666777666 7999
Q ss_pred Ee-ccccCcHHHHHHHHCCCCEEEE
Q psy1056 375 IG-GNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 375 i~-g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
++ |++.+.+++.+++.+|||++-+
T Consensus 362 ia~GGI~~~~di~kala~GAd~V~i 386 (514)
T 1jcn_A 362 IADGGIQTVGHVVKALALGASTVMM 386 (514)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred EEECCCCCHHHHHHHHHcCCCeeeE
Confidence 95 8888999999999999999954
No 46
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.60 E-value=1.4e-15 Score=134.71 Aligned_cols=112 Identities=13% Similarity=0.207 Sum_probs=97.0
Q ss_pred cccccc--ccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccchhhc
Q psy1056 180 QVIGGN--VVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLKIEKV 253 (590)
Q Consensus 180 ~im~~~--~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~V~~i 253 (590)
++|+.+ +.+ ++++.+|++.| .+++++++||+++ + ++++|++|.+|+...........+++++
T Consensus 7 diM~~~~~~~~v~~~~~~~~a~~~m---------~~~~~~~~pVvd~---~~~~~vGivt~~dl~~~~~~~~~~~~v~~~ 74 (127)
T 3nqr_A 7 DIMIPRSQMITLKRNQTLDECLDVI---------IESAHSRFPVISE---DKDHIEGILMAKDLLPFMRSDAEAFSMDKV 74 (127)
T ss_dssp HHSEEGGGCCCEETTCCHHHHHHHH---------HHHCCSEEEEESS---STTCEEEEEEGGGGGGGGSTTCCCCCHHHH
T ss_pred HhcccHHHeEEEcCCCCHHHHHHHH---------HhCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHhccCCCCCHHHH
Confidence 477743 544 89999999999 9999999999997 6 7999999999998432222346889999
Q ss_pred cccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 254 MTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 254 m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
|+ +++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 75 m~---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 75 LR---TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CB---CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred cC---CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 96 567999999999999999999999999999999999999999999864
No 47
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.59 E-value=2.3e-15 Score=135.19 Aligned_cols=114 Identities=11% Similarity=0.171 Sum_probs=97.4
Q ss_pred cccc--ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhcccc-ccccccchhh
Q psy1056 180 QVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLEN-SANMDLKIEK 252 (590)
Q Consensus 180 ~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~-~~~~~~~V~~ 252 (590)
++|+ .++.+ ++++.+|++.| .+++++++||+++ + ++++|+||.+|++.... ......++++
T Consensus 7 ~iM~~~~~~~~v~~~~~v~~a~~~m---------~~~~~~~~pVvd~---~~~~~vGivt~~dl~~~~~~~~~~~~~v~~ 74 (136)
T 3lfr_A 7 DIMVPRSQMISIKATQTPREFLPAV---------IDAAHSRYPVIGE---SHDDVLGVLLAKDLLPLILKADGDSDDVKK 74 (136)
T ss_dssp HHSEEGGGCCCEETTCCHHHHHHHH---------HHHCCSEEEEESS---STTCEEEEEEGGGGGGGGGSSSGGGCCGGG
T ss_pred hccccHHHEEEEcCCCCHHHHHHHH---------HhCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHHhccCCCcCHHH
Confidence 4776 44444 89999999999 9999999999997 5 79999999999984322 2234678999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
+|+ +++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+..
T Consensus 75 ~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 75 LLR---PATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp TCB---CCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--
T ss_pred HcC---CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 996 58899999999999999999999999999999999999999999987653
No 48
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.59 E-value=2e-15 Score=141.44 Aligned_cols=117 Identities=12% Similarity=0.137 Sum_probs=101.4
Q ss_pred CCCccccc--ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccc
Q psy1056 176 YPDMQVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLK 249 (590)
Q Consensus 176 ~~~~~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~ 249 (590)
.+..++|+ .++.+ ++++.+|++.| .+++++++||+++ + ++++|+||.+|+....... ...+
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m---------~~~~~~~~pVvd~---~~~~lvGivt~~dl~~~~~~~-~~~~ 108 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTV---------MQSPHSRFPVCRN---NVDDMVGIISAKQLLSESIAG-ERLE 108 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHH---------HTCCCSEEEEESS---STTSEEEEEEHHHHHHHHHTT-CCCC
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHH---------HhCCCCEEEEEeC---CCCeEEEEEEHHHHHHHHhhc-Cccc
Confidence 45567898 55554 88999999999 9999999999997 6 8999999999998432221 2578
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
++++| + +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++....
T Consensus 109 v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 109 LVDLV-K--NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp GGGGC-B--CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred HHHHh-c--CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 99999 7 89999999999999999999999999999999999999999999987653
No 49
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.59 E-value=1.1e-15 Score=136.12 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=98.5
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccc
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLK 249 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~ 249 (590)
.+..++|+. ++.+ ++++.+|++.| .+++++++||+++ + ++++|++|.+|+...........+
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m---------~~~~~~~~pVvd~---~~~~~~Givt~~dl~~~~~~~~~~~~ 73 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKH---------KDTPFSRPLVYSE---QKDNIIGFVHRLELFKMQQSGSGQKQ 73 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHT---------TTCSCSCCEEESS---STTCEEEECCHHHHHHHHHTTTTTSB
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHH---------HhCCCCEEEEEeC---CCCcEEEEEEHHHHHHHHhcCCCcCC
Confidence 345568874 3323 89999999999 9999999999997 5 899999999999844322224688
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
++++|+ +++++++++++.+|++.|.+++++.+||+|++|+++|+||..|+++..
T Consensus 74 v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 74 LGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp HHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred HHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 999994 688999999999999999999999999999999999999999998764
No 50
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.59 E-value=1.3e-15 Score=138.76 Aligned_cols=115 Identities=16% Similarity=0.291 Sum_probs=100.6
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccc
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLK 249 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~ 249 (590)
.+..++|+. ++.+ ++++.++++.| .+++++++||+++ + ++++|+||.+|+....... ...+
T Consensus 23 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m---------~~~~~~~~pVvd~---~~~~lvGivt~~dl~~~~~~~-~~~~ 89 (148)
T 3lv9_A 23 KKIREIMVPRTDMVCIYESDSEEKILAIL---------KEEGVTRYPVCRK---NKDDILGFVHIRDLYNQKINE-NKIE 89 (148)
T ss_dssp CBGGGTSEETTTCCCEETTCCHHHHHHHH---------HHSCCSEEEEESS---STTSEEEEEEHHHHHHHHHHH-SCCC
T ss_pred CCHHHccccHHHeEEECCCCCHHHHHHHH---------HHCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHhcC-CCcc
Confidence 556678987 6655 89999999999 9999999999997 6 7999999999998432111 1578
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
++++| + +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++..
T Consensus 90 v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l 143 (148)
T 3lv9_A 90 LEEIL-R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEI 143 (148)
T ss_dssp GGGTC-B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHH
T ss_pred HHHhc-C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 99999 7 899999999999999999999999999999999999999999998864
No 51
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.58 E-value=2.1e-15 Score=139.11 Aligned_cols=112 Identities=17% Similarity=0.272 Sum_probs=95.3
Q ss_pred cccc--ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc--c----ccccccc
Q psy1056 180 QVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL--E----NSANMDL 248 (590)
Q Consensus 180 ~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~--~----~~~~~~~ 248 (590)
++|. .++.+ ++++.+|++.| .+++++++||+|+ +++++|++|.+|+... . .......
T Consensus 19 ~iM~P~~~v~~v~~~~t~~~a~~~m---------~~~~~s~~pVvd~---~~~lvGiit~~Di~~~~~~~~~~~~~~~~~ 86 (156)
T 3k6e_A 19 TFLTPAKNLAVLIDTHNADHATLLL---------SQMTYTRVPVVTD---EKQFVGTIGLRDIMAYQMEHDLSQEIMADT 86 (156)
T ss_dssp GGEEETTSSCCEETTSBHHHHHHHH---------TTSSSSEEEEECC----CBEEEEEEHHHHHHHHHHHTCCHHHHTTS
T ss_pred HhCcchhHeEEECCcCCHHHHHHHH---------HHcCCcEEEEEcC---CCcEEEEEEecchhhhhhhccccccccccc
Confidence 3675 34544 99999999999 9999999999998 7999999999999722 1 1112467
Q ss_pred chhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 249 KIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 249 ~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+++++|++ +++++++++++.+|+++|.++++ +||+|++|+++|+||.+|++++..
T Consensus 87 ~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 87 DIVHMTKT--DVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp BGGGTCBC--SCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CHHHhhcC--CceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHH
Confidence 89999999 99999999999999999988764 999999999999999999999864
No 52
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.57 E-value=5.1e-15 Score=143.68 Aligned_cols=201 Identities=16% Similarity=0.119 Sum_probs=90.5
Q ss_pred HhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCccccc
Q psy1056 16 LKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPL 95 (590)
Q Consensus 16 ~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l 95 (590)
-++-.++++|.++++++++++|+.+|+++|.+++++++||+|++ ++++|++|.+|+.... ...++
T Consensus 10 ~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~---~~l~Givt~~dl~~~~------------~~~~v 74 (213)
T 1vr9_A 10 HHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDRE---GHFRGVVNKEDLLDLD------------LDSSV 74 (213)
T ss_dssp ---CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT---SBEEEEEEGGGGTTSC------------TTSBS
T ss_pred ccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC---CEEEEEEEHHHHHhhc------------CCCcH
Confidence 34555666799999999999999999999999999999999976 7999999999432210 00000
Q ss_pred ccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhc
Q psy1056 96 TKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKE 175 (590)
Q Consensus 96 ~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~ 175 (590)
T Consensus 75 -------------------------------------------------------------------------------- 74 (213)
T 1vr9_A 75 -------------------------------------------------------------------------------- 74 (213)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccccccccccchhh
Q psy1056 176 YPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEK 252 (590)
Q Consensus 176 ~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~~~~~~~V~~ 252 (590)
.++|..++.+ ++++.++++.| .+++++++||+|+ +++++|+||.+|+....... ..+.+
T Consensus 75 ---~~im~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVvd~---~g~lvGiit~~Dil~~~~~~---~~~~~ 136 (213)
T 1vr9_A 75 ---FNKVSLPDFFVHEEDNITHALLLF---------LEHQEPYLPVVDE---EMRLKGAVSLHDFLEALIEA---LAMDV 136 (213)
T ss_dssp ---GGGCBCTTCCEETTSBHHHHHHHH---------HHCCCSEEEEECT---TCBEEEEEEHHHHHHHHHHS---CC---
T ss_pred ---HHHccCCCEEECCCCcHHHHHHHH---------HHhCCCEEEEEcC---CCEEEEEEEHHHHHHHHHHH---hcCCC
Confidence 1144444333 77899999999 9999999999998 69999999999998332211 22344
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHH
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADK 332 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~ 332 (590)
.|.+. .+.+.....++.++.++|.+++++.+||.+.+|.- + ...+...+. ..+..
T Consensus 137 ~~~~l-~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~~-~----------------------~~~v~~~v~-~~~~~ 191 (213)
T 1vr9_A 137 PGIRF-SVLLEDKPGELRKVVDALALSNINILSVITTRSGD-G----------------------KREVLIKVD-AVDEG 191 (213)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEE-EEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecCC-C----------------------EEEEEEEEc-cCCHH
Confidence 44430 11122444569999999999999999998654331 1 001111111 12344
Q ss_pred HHHHHHHHcCCcEEEEecCCCc
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGN 354 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~ 354 (590)
+.++.|.+.|++++.++..+|+
T Consensus 192 ~i~~~le~~g~~v~~~~~~~g~ 213 (213)
T 1vr9_A 192 TLIKLFESLGIKIESIEKEEGF 213 (213)
T ss_dssp ----------------------
T ss_pred HHHHHHHHCCCEEEEeecccCC
Confidence 5667777888888877666653
No 53
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.57 E-value=5.5e-15 Score=131.35 Aligned_cols=111 Identities=14% Similarity=0.185 Sum_probs=95.4
Q ss_pred ccccc--ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccchhh
Q psy1056 179 MQVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLKIEK 252 (590)
Q Consensus 179 ~~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~V~~ 252 (590)
.++|+ .++.+ ++++.+|++.| .+++++++||+++ + ++++|+||.+|+...... ...++++
T Consensus 8 ~diM~~~~~~~~v~~~~~~~~a~~~m---------~~~~~~~~pVvd~---~~~~~~Givt~~dl~~~~~~--~~~~v~~ 73 (129)
T 3jtf_A 8 ADIMVPRSRMDLLDISQPLPQLLATI---------IETAHSRFPVYED---DRDNIIGILLAKDLLRYMLE--PALDIRS 73 (129)
T ss_dssp HHHCEEGGGCCCEETTSCHHHHHHHH---------HHSCCSEEEEESS---STTCEEEEEEGGGGGGGGTC--TTSCGGG
T ss_pred HHhCccHHHeEEECCCCCHHHHHHHH---------HHcCCCEEEEEcC---CCCcEEEEEEHHHHHhHhcc--CCcCHHH
Confidence 34777 44444 89999999999 9999999999987 5 899999999999843222 2578999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
+|+ +++++++++++.+|+++|.+++.+.+||+|++|+++|+||.+|+++.+
T Consensus 74 ~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 74 LVR---PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQI 124 (129)
T ss_dssp GCB---CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHH
T ss_pred HhC---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 996 578999999999999999999999999999999999999999999864
No 54
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.57 E-value=1.1e-14 Score=134.08 Aligned_cols=113 Identities=12% Similarity=0.181 Sum_probs=97.8
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccc
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLK 249 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~ 249 (590)
.+..++|+. ++.+ ++++.++++.| .+++++++||+++ + ++++|+||.+|+....... ...+
T Consensus 38 ~~v~diM~~~~~~~~v~~~~~i~~a~~~m---------~~~~~~~~pVvd~---~~~~lvGivt~~dl~~~~~~~-~~~~ 104 (156)
T 3oi8_A 38 LEVRDAMITRSRMNVLKENDSIERITAYV---------IDTAHSRFPVIGE---DKDEVLGILHAKDLLKYMFNP-EQFH 104 (156)
T ss_dssp CBGGGTCEEGGGCCCEETTCCHHHHHHHH---------HHHCCSEEEEESS---STTCEEEEEEGGGGGGGSSCG-GGCC
T ss_pred CCHhheeeeHHHeEEECCCCCHHHHHHHH---------HHCCCCEEEEEcC---CCCcEEEEEEHHHHHHHHHcC-Cccc
Confidence 556678975 4444 99999999999 9999999999997 5 4999999999998442221 4578
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKK 304 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~ 304 (590)
++++|+ +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++
T Consensus 105 v~~im~---~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dile 156 (156)
T 3oi8_A 105 LKSILR---PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIE 156 (156)
T ss_dssp HHHHCB---CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHCC
T ss_pred HHHHcC---CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhcC
Confidence 999996 5789999999999999999999999999999999999999999874
No 55
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.56 E-value=2.4e-15 Score=176.46 Aligned_cols=164 Identities=17% Similarity=0.141 Sum_probs=126.8
Q ss_pred hhHHHHHHHHHHhCCCceEEecccc---CcHHHHHHHHCCCCEEEEcccccccC----CCcccccc-chhHHHHHHHHHh
Q psy1056 356 IYQIEMIKFIKKEYPDMQVIGGNVL---FGYQPRATLLNFIYQIEMIKFIKKEY----PDMQVIGR-NGTAVYRVAEYAS 427 (590)
Q Consensus 356 ~~~l~~i~~i~~~~~~vpvi~g~v~---s~~~a~~l~~~Gvd~i~v~~~~~~~~----~~~~~~g~-~~~~l~~~~~~~~ 427 (590)
..+.+.++++++.+|++|+++|.+. ....|+.+.++|||+|.|+...+... ....+||. +..+|.++.+.+.
T Consensus 978 edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~ 1057 (1479)
T 1ea0_A 978 EDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLT 1057 (1479)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHH
Confidence 3457889999999989999999886 47789999999999998854322110 01245788 7788888888764
Q ss_pred cC----CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC-----------CCCCceEeecCeeeeeeeccccHHHH
Q psy1056 428 RR----GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS-----------EAPGEYFFSDGVRLKKYRGMGSLEAM 492 (590)
Q Consensus 428 ~~----~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~-----------es~~~~~~~~g~~~k~~~g~~s~~a~ 492 (590)
.. ++|||++|||+|+.|++|||+|||++|++|++|..+. +||..+.+++....|.|.|
T Consensus 1058 ~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~g------- 1130 (1479)
T 1ea0_A 1058 LNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVG------- 1130 (1479)
T ss_dssp TTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCC-------
T ss_pred HcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCC-------
Confidence 33 5999999999999999999999999999999885543 6676665555544433322
Q ss_pred hcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 493 SRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
| ...|.+++..|..+||..|.++|+++++||+.+
T Consensus 1131 -------------------------g-------~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~ 1164 (1479)
T 1ea0_A 1131 -------------------------T-------PEKVVNLFTFLAEEVREILAGLGFRSLNEVIGR 1164 (1479)
T ss_dssp -------------------------C-------HHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTC
T ss_pred -------------------------c-------hHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCc
Confidence 1 123788899999999999999999999999655
No 56
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.56 E-value=2.5e-15 Score=133.20 Aligned_cols=116 Identities=13% Similarity=0.156 Sum_probs=100.6
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccccc-cccccchhh
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS-ANMDLKIEK 252 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~-~~~~~~V~~ 252 (590)
+..++|..++.+ ++++.++++.| .+++++++||+++ ++++|++|.+|+...... .....++++
T Consensus 6 ~v~~~m~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~----~~~~Givt~~dl~~~~~~~~~~~~~v~~ 72 (128)
T 3gby_A 6 TFSYLAETDYPVFTLGGSTADAARRL---------AASGCACAPVLDG----ERYLGMVHLSRLLEGRKGWPTVKEKLGE 72 (128)
T ss_dssp BGGGGCBCCSCCEETTSBHHHHHHHH---------HHHTCSEEEEEET----TEEEEEEEHHHHHTTCSSSCCTTCBCCG
T ss_pred EHHHhhcCCcceECCCCCHHHHHHHH---------HHCCCcEEEEEEC----CEEEEEEEHHHHHHHHhhCCcccCcHHH
Confidence 344588877666 89999999999 9999999999996 899999999999843222 212377999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+|.+ +++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++...
T Consensus 73 ~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 73 ELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp GGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 9998 9999999999999999999999999999999999999999999998653
No 57
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.56 E-value=6.7e-15 Score=132.68 Aligned_cols=115 Identities=14% Similarity=0.183 Sum_probs=99.3
Q ss_pred Ccccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCC--eEEEEEecchhhcc-ccccccccchh
Q psy1056 178 DMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGE--KLLGIVTSRDVDFL-ENSANMDLKIE 251 (590)
Q Consensus 178 ~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~--~lvGivt~~Dl~~~-~~~~~~~~~V~ 251 (590)
..++|..++.+ ++++.++++.| .+++++.+||+|+ ++ +++|+||.+|+... ........+++
T Consensus 7 v~~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~~~Givt~~dl~~~~~~~~~~~~~v~ 74 (141)
T 2rih_A 7 TSELLKRPPVSLPETATIREVATEL---------AKNRVGLAVLTAR---DNPKRPVAVVSERDILRAVAQRLDLDGPAM 74 (141)
T ss_dssp GGGGCCSCCEEEETTCBHHHHHHHH---------HHHTCSEEEEEET---TEEEEEEEEEEHHHHHHHHHTTCCTTSBSG
T ss_pred HHHHhcCCCeEeCCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCcceeEEEEEHHHHHHHHhcCCCCCCCHH
Confidence 34578776655 88999999999 9999999999998 57 99999999999732 22222368899
Q ss_pred hccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 252 KVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 252 ~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
++|.+ ++++++++ ++.+|+++|.+++++.+||+|++|+++|+||.+|+++...
T Consensus 75 ~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 75 PIANS--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp GGCBC--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred HHcCC--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 99998 99999999 9999999999999999999999999999999999988643
No 58
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=4.3e-15 Score=132.39 Aligned_cols=113 Identities=13% Similarity=0.177 Sum_probs=95.2
Q ss_pred ccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcccc--ccccccchhh
Q psy1056 180 QVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLEN--SANMDLKIEK 252 (590)
Q Consensus 180 ~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~--~~~~~~~V~~ 252 (590)
++|+. ++.+ ++++.+|++.| .+++++++||+++. +++++|++|.+|++.... ......++++
T Consensus 6 ~iM~~~~~~~~v~~~~~v~~a~~~m---------~~~~~~~~pVv~~~--~~~lvGivt~~dl~~~~~~~~~~~~~~v~~ 74 (130)
T 3hf7_A 6 DIMVPRNEIVGIDINDDWKSIVRQL---------THSPHGRIVLYRDS--LDDAISMLRVREAYRLMTEKKEFTKEIMLR 74 (130)
T ss_dssp HHSEEGGGCCEEETTSCHHHHHHHH---------HTCSSSEEEEESSS--GGGEEEEEEHHHHHHHHTSSSCCCHHHHHH
T ss_pred HhCccHHHEEEEcCCCCHHHHHHHH---------HHCCCCeEEEEcCC--CCcEEEEEEHHHHHHHHhccCccchhhHHH
Confidence 47753 3433 89999999999 99999999999641 479999999999983322 2223467999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
+| + +++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 75 ~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 75 AA-D--EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEI 125 (130)
T ss_dssp HS-B--CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred hc-c--CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 99 4 789999999999999999999999999999999999999999999864
No 59
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.54 E-value=2.9e-13 Score=147.89 Aligned_cols=273 Identities=22% Similarity=0.282 Sum_probs=174.7
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeecc--CCcccceeEEEEecccccccc
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTE--NGKLGEKLLGIVTSRDVDFLE 78 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd--~~~~~~~lvGivT~~Did~l~ 78 (590)
+||++|+++++.+++.++++++++|..+++++++++|+.+|+++|.+++++++||+| ++ ++++|+||.+| ++.
T Consensus 72 ~i~~~~~~e~~~~~i~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~---~~lvGivt~~D--l~~ 146 (491)
T 1zfj_A 72 VIHKNMSITEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN---RKLVGIITNRD--MRF 146 (491)
T ss_dssp EECCSSCHHHHHHHHHHHHHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT---CBEEEEEEHHH--HHH
T ss_pred EEeCCCCHHHHHHHHHHHhhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC---CEEEEEEEHHH--Hhh
Confidence 368999999999999999999999999999999999999999999999999999998 65 79999999994 431
Q ss_pred CCCCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCC
Q psy1056 79 NSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSS 158 (590)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~ 158 (590)
.. +...++
T Consensus 147 ~~---------~~~~~v--------------------------------------------------------------- 154 (491)
T 1zfj_A 147 IS---------DYNAPI--------------------------------------------------------------- 154 (491)
T ss_dssp CS---------CSSSBT---------------------------------------------------------------
T ss_pred hc---------cCCCcH---------------------------------------------------------------
Confidence 00 000011
Q ss_pred CCchHHHHHHHHHhhhcCCCcccccc-cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEec
Q psy1056 159 QGNSIYQIEMIKYIKKEYPDMQVIGG-NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTS 234 (590)
Q Consensus 159 ~~~~~~~~~~v~~vk~~~~~~~im~~-~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~ 234 (590)
.++|+. ++.+ ++++.++++.| .++++..+||+|+ +++++|++|.
T Consensus 155 --------------------~~im~~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVVd~---~g~lvGivt~ 202 (491)
T 1zfj_A 155 --------------------SEHMTSEHLVTAAVGTDLETAERIL---------HEHRIEKLPLVDN---SGRLSGLITI 202 (491)
T ss_dssp --------------------TTSCCCSCCCCEETTCCHHHHHHHH---------HHTTCSEEEEECT---TSBEEEEEEH
T ss_pred --------------------HHHcCCCCCEEECCCCCHHHHHHHH---------HHcCCCEEEEEcC---CCcEEEEEEH
Confidence 124443 3222 67888999999 9999999999998 7999999999
Q ss_pred chhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcc
Q psy1056 235 RDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKD 314 (590)
Q Consensus 235 ~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d 314 (590)
.|+....... ...++......--..+.......+....+.+.+.+.+.+--..|+.-+. .+.++......
T Consensus 203 ~Dil~~~~~~---~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~---~~~i~~l~~~~---- 272 (491)
T 1zfj_A 203 KDIEKVIEFP---HAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGV---LRKIAEIRAHF---- 272 (491)
T ss_dssp HHHHHHHHCT---TCCBCTTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHH---HHHHHHHHHHC----
T ss_pred HHHHHHHhcc---ccccCcCCcEEEEEeccCchhHHHHHHHHHHcCCCeEEEeeecCcchhH---HHHHHHHHHHC----
Confidence 9998322110 0011111000011123333334455666777788876543222221110 11111111000
Q ss_pred cCCceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCc----------hhhHHHHHHHHHH---hCCCceEEe-cccc
Q psy1056 315 ENNQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGN----------SIYQIEMIKFIKK---EYPDMQVIG-GNVL 380 (590)
Q Consensus 315 ~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~----------~~~~l~~i~~i~~---~~~~vpvi~-g~v~ 380 (590)
+.-.+ +..++.. .+.+..+.+.|++.+.+....|. .....+.+..+.. .. ++|+|+ |++.
T Consensus 273 p~~pv-i~G~v~t----~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~-~ipvia~GGi~ 346 (491)
T 1zfj_A 273 PNRTL-IAGNIAT----AEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREY-GKTIIADGGIK 346 (491)
T ss_dssp SSSCE-EEEEECS----HHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHT-TCEEEEESCCC
T ss_pred CCCcE-eCCCccC----HHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhc-CCCEEeeCCCC
Confidence 01122 2333332 35666788999999987432111 0112334444443 33 789985 7888
Q ss_pred CcHHHHHHHHCCCCEEEE
Q psy1056 381 FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v 398 (590)
+.+++.++..+||+++-+
T Consensus 347 ~~~di~kal~~GA~~v~v 364 (491)
T 1zfj_A 347 YSGDIVKALAAGGNAVML 364 (491)
T ss_dssp SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHcCCcceee
Confidence 999999999999999955
No 60
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.54 E-value=6.7e-15 Score=131.89 Aligned_cols=117 Identities=22% Similarity=0.385 Sum_probs=100.4
Q ss_pred CCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchh-h-ccccccccccch
Q psy1056 176 YPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDV-D-FLENSANMDLKI 250 (590)
Q Consensus 176 ~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl-~-~~~~~~~~~~~V 250 (590)
.+..++|..++.+ ++++.++++.| .+++++++||+|+ +++++|++|.+|+ . ..........++
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v 75 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKM---------LKYKISSLPVIDD---ENKVIGIVTTTDIGYNLIRDKYTLETTI 75 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHH---------HHHTCCEEEEECT---TCBEEEEEEHHHHHHHHTTTCCCSSCBH
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHH---------HHCCCcEEEEECC---CCeEEEEEEHHHHHHHHHhhcccCCcCH
Confidence 4455688776655 88999999999 9999999999997 6999999999999 6 232222346789
Q ss_pred hhccccCCCeeEEcCCCCHHHHHHHHHhcC-----CCcceEEcCCCceEEEEeeccccccc
Q psy1056 251 EKVMTNVNEIISAQAGISLEEANVILEKSK-----KGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 251 ~~im~~~~~~~tv~~~~~l~ea~~~m~~~~-----~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
+++|.+ +++++++++++.++++.|.+++ ++.+||+|++|+++|+||..|+++..
T Consensus 76 ~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 134 (138)
T 2p9m_A 76 GDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTI 134 (138)
T ss_dssp HHHSCS--SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHHhCC--CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHH
Confidence 999998 9999999999999999999999 99999999999999999999998764
No 61
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.54 E-value=1.4e-14 Score=157.69 Aligned_cols=265 Identities=18% Similarity=0.250 Sum_probs=90.2
Q ss_pred CcCCCCCHHHHHHHHHhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCC
Q psy1056 1 IIHHNCTPEYQANEVLKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENS 80 (590)
Q Consensus 1 ~~~~~~~~~~~~~~~~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~ 80 (590)
+||+||+++++...+.+|+++++.|..+++++++++|+.+++++|.+++++++||+|++ +++|+||.+ |++. .
T Consensus 75 ~i~~~~~~e~~~~~I~~v~~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~----~lvGivt~~--Dl~~-~ 147 (486)
T 2cu0_A 75 VIHRNMGIEEQVEQVKRVKRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDE----KVVGIITKK--DIAA-R 147 (486)
T ss_dssp EECSSSCHHHHHHHHHHHHTCC----------------------------------------------------------
T ss_pred eecCCCCHHHHHHHHHhhcchhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECC----EEEEEEEHH--Hhcc-C
Confidence 47999999999999999999999999999999999999999999999999999999874 999999999 4431 0
Q ss_pred CCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCC
Q psy1056 81 ANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQG 160 (590)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~ 160 (590)
...++.
T Consensus 148 ----------~~~~v~---------------------------------------------------------------- 153 (486)
T 2cu0_A 148 ----------EGKLVK---------------------------------------------------------------- 153 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------CCCCHH----------------------------------------------------------------
Confidence 000000
Q ss_pred chHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchh
Q psy1056 161 NSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDV 237 (590)
Q Consensus 161 ~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl 237 (590)
++|+.++.+ ++++.++++.| .++++..+||+|+ +++++|++|.+|+
T Consensus 154 -------------------~im~~~~~~v~~~~~l~eal~~m---------~~~~~~~lpVVde---~g~lvGiiT~~Di 202 (486)
T 2cu0_A 154 -------------------ELMTKEVITVPESIEVEEALKIM---------IENRIDRLPVVDE---RGKLVGLITMSDL 202 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------HHccCCCeEECCcCcHHHHHHHH---------HHcCCCEEEEEec---CCeEEEEEEHHHH
Confidence 122222211 67788899999 9999999999998 7999999999999
Q ss_pred hccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCC
Q psy1056 238 DFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENN 317 (590)
Q Consensus 238 ~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~ 317 (590)
....... ...++.+....-...+..++ .+.+..|.+.+.+.++|-...|...++++.-..++... .-
T Consensus 203 l~~~~~~---~~~~~~~g~~~v~~~~~~~~--~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~~--------~v 269 (486)
T 2cu0_A 203 VARKKYK---NAVRDENGELLVAAAVSPFD--IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKV--------DA 269 (486)
T ss_dssp ----CCT---TCCBCTTSCBCCEEEECTTC--HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTC--------CS
T ss_pred HHhhhcc---ccccccCCceeecceechhh--HHHHHHHHHhcCCceEEEecCCcEeehhhHHHHHHHHh--------CC
Confidence 8443211 11122111100011233333 55677888899887644334566555554322222211 01
Q ss_pred ceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCC------------Cch-hhHHHHHHHHHHhCCCceEEe-ccccCcH
Q psy1056 318 QLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQ------------GNS-IYQIEMIKFIKKEYPDMQVIG-GNVLFGY 383 (590)
Q Consensus 318 ~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~------------G~~-~~~l~~i~~i~~~~~~vpvi~-g~v~s~~ 383 (590)
. ++.-+++. .+.+..+. |++.+.+.... |.+ ...+..+..+...+ ++|||+ |++.+..
T Consensus 270 p-vi~k~v~~----~~~a~~l~--G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~-~vpVia~GGi~~~~ 341 (486)
T 2cu0_A 270 D-FIVGNIAN----PKAVDDLT--FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY-GLYVIADGGIRYSG 341 (486)
T ss_dssp E-EEEEEECC----HHHHTTCT--TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH-TCEEEEESCCCSHH
T ss_pred c-cccCCcCC----HHHHHHhh--CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHc-CCcEEecCCCCCHH
Confidence 1 23334442 23333444 99998873211 111 12234445555555 789985 7788999
Q ss_pred HHHHHHHCCCCEEEE
Q psy1056 384 QPRATLLNFIYQIEM 398 (590)
Q Consensus 384 ~a~~l~~~Gvd~i~v 398 (590)
++.+++.+|||++-+
T Consensus 342 di~kalalGA~~v~~ 356 (486)
T 2cu0_A 342 DIVKAIAAGADAVML 356 (486)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCceee
Confidence 999999999999966
No 62
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.53 E-value=6e-15 Score=129.23 Aligned_cols=112 Identities=18% Similarity=0.317 Sum_probs=98.4
Q ss_pred ccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccccccccccchhhcccc
Q psy1056 180 QVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTN 256 (590)
Q Consensus 180 ~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~ 256 (590)
++|..++.+ ++++.++++.| .+++++.+||+++ +++++|++|.+|+....... ..++.++|.+
T Consensus 5 ~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~G~vt~~dl~~~~~~~--~~~v~~~~~~ 70 (122)
T 3kpb_A 5 DILSKPPITAHSNISIMEAAKIL---------IKHNINHLPIVDE---HGKLVGIITSWDIAKALAQN--KKTIEEIMTR 70 (122)
T ss_dssp HHCCSCCCCEETTSBHHHHHHHH---------HHHTCSCEEEECT---TSBEEEEECHHHHHHHHHTT--CCBGGGTSBS
T ss_pred HhhCCCCEEeCCCCcHHHHHHHH---------HHcCCCeEEEECC---CCCEEEEEEHHHHHHHHHhc--ccCHHHHhcC
Confidence 367766655 88999999999 9999999999997 69999999999998332211 2589999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 257 VNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 257 ~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+++++++++++.+++++|.+++.+.+||+|++|+++|+||.+|+++...
T Consensus 71 --~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 71 --NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp --SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred --CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998754
No 63
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.53 E-value=6.5e-15 Score=134.94 Aligned_cols=118 Identities=14% Similarity=0.186 Sum_probs=99.8
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEe-eCCCCCCeEEEEEecchhhccccccccccc
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVT-ENGKLGEKLLGIVTSRDVDFLENSANMDLK 249 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVv-d~~~~~~~lvGivt~~Dl~~~~~~~~~~~~ 249 (590)
.+..++|+. ++.+ ++++.+|++.| .+++++++||+ ++. +++++|+||.+|+....... ...+
T Consensus 20 ~~v~~iM~~~~~~~~v~~~~~~~~a~~~m---------~~~~~~~~pVv~d~~--~~~lvGivt~~dl~~~~~~~-~~~~ 87 (153)
T 3oco_A 20 KVASDVMVDRTSMSVVDVDETIADALLLY---------LEEQYSRFPVTADND--KDKIIGYAYNYDIVRQARID-DKAK 87 (153)
T ss_dssp CBHHHHSEEGGGCCCEETTSBHHHHHHHH---------HHHCCSEEEEEETTE--EEEEEEEEEHHHHHHHHHHH-TTSB
T ss_pred CEeeeEecchhheEEEcCCCCHHHHHHHH---------HhCCCCEEEEEECCC--CCcEEEEEEHHHHHhHHhcC-CCCc
Confidence 445568874 5544 89999999999 99999999999 530 38999999999998332111 2578
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
++++| + +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++....
T Consensus 88 v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 88 ISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp GGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred HHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 99999 7 89999999999999999999999999999999999999999999987653
No 64
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.53 E-value=7.9e-15 Score=135.27 Aligned_cols=120 Identities=15% Similarity=0.149 Sum_probs=103.7
Q ss_pred CCCcccccccccc--hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc--ccccccccchh
Q psy1056 176 YPDMQVIGGNVVT--TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL--ENSANMDLKIE 251 (590)
Q Consensus 176 ~~~~~im~~~~~~--~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~--~~~~~~~~~V~ 251 (590)
.+..++|..+++. ++++.+|++.| .+++++++||+|+ +++++|+||.+|+... ........++.
T Consensus 17 ~~v~~im~~~~~v~~~~~~~~a~~~m---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v~ 84 (159)
T 3fv6_A 17 LQVKDFQSIPVVIHENVSVYDAICTM---------FLEDVGTLFVVDR---DAVLVGVLSRKDLLRASIGQQELTSVPVH 84 (159)
T ss_dssp CBGGGSCBCCCEEETTSBHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHHHHHTSCSCTTTCBGG
T ss_pred CCHHHHcCCCEEECCCCcHHHHHHHH---------HHCCCCEEEEEcC---CCcEEEEEeHHHHHHHhhccCcccCcCHH
Confidence 5566789876644 89999999999 9999999999997 6999999999999832 22333468899
Q ss_pred hccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCC---ceEEEEeecccccccC
Q psy1056 252 KVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKG---ELIALIARTDLKKSRD 307 (590)
Q Consensus 252 ~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g---~l~Giit~~dll~~~~ 307 (590)
++|++..+++++++++++.+|+++|.+++++.+||+|++| +++|+||.+||++.+.
T Consensus 85 ~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 85 IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 9998645788999999999999999999999999999888 9999999999998754
No 65
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.53 E-value=1.2e-14 Score=132.45 Aligned_cols=114 Identities=13% Similarity=0.172 Sum_probs=99.3
Q ss_pred CCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc--ccccccccc
Q psy1056 177 PDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL--ENSANMDLK 249 (590)
Q Consensus 177 ~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~--~~~~~~~~~ 249 (590)
+..++|.. ++.+ ++++.++++.| .+++++.+||+|+ +++++|+||.+|+... ........+
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~ 96 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEI---------TRKNLGMTAICDD---DMNIIGIFTDGDLRRVFDTGVDMRDAS 96 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHH---------HHHTSSEEEEECT---TCBEEEEEEHHHHHHHHCSSSCCTTCB
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHH---------HhCCCcEEEEECC---CCcEEEEecHHHHHHHHhcCCCcccCc
Confidence 44568887 6655 88999999999 9999999999997 6999999999999832 222235689
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccc
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKS 305 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~ 305 (590)
++++|++ +++++++++++.+|+++|.+++++.+||+|++ +++|+||..||+++
T Consensus 97 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~a 149 (149)
T 3k2v_A 97 IADVMTR--GGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLRA 149 (149)
T ss_dssp HHHHSEE--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTCC
T ss_pred HHHHcCC--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhcC
Confidence 9999998 99999999999999999999999999999976 99999999999863
No 66
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.53 E-value=1.3e-14 Score=135.50 Aligned_cols=133 Identities=26% Similarity=0.298 Sum_probs=94.0
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccccccC
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLA 102 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (590)
++|+++++++++++|+.+|+++|.+++++++||+|++ |+++|+||.+| ++..... ....
T Consensus 22 diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~---g~lvGiit~~D--ll~~~~~----------~~~~------ 80 (170)
T 4esy_A 22 DILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN---GHLVGIITESD--FLRGSIP----------FWIY------ 80 (170)
T ss_dssp GGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT---SCEEEEEEGGG--GGGGTCC----------TTHH------
T ss_pred HhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC---ccEEEEEEHHH--HHHHHhh----------cccc------
Confidence 4499999999999999999999999999999999987 89999999995 4321000 0000
Q ss_pred CceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccc
Q psy1056 103 APLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVI 182 (590)
Q Consensus 103 ~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im 182 (590)
. ... . .. .... ........+.... .+..++|
T Consensus 81 ------------~-~~~--~-~~-------~~~~-------------------------~~~~~~~~~~~~~-~~v~~im 111 (170)
T 4esy_A 81 ------------E-ASE--I-LS-------RAIP-------------------------APEVEHLFETGRK-LTASAVM 111 (170)
T ss_dssp ------------H-HHH--H-HT-------TTSC-------------------------HHHHHHHHHHHTT-CBHHHHC
T ss_pred ------------c-hhh--h-hh-------hccc-------------------------hhhHHhhhccccc-cchhhhc
Confidence 0 000 0 00 0000 0001111112222 4445689
Q ss_pred cccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 183 GGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 183 ~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
+.++.+ ++++.++++.| .+++++++||+|+ |+++||||.+|+.
T Consensus 112 ~~~~~tv~~~~~l~~a~~~m---------~~~~~~~lpVvd~----g~lvGivt~~Dil 157 (170)
T 4esy_A 112 TQPVVTAAPEDSVGSIADQM---------RRHGIHRIPVVQD----GVPVGIVTRRDLL 157 (170)
T ss_dssp BCCSCCBCTTSBHHHHHHHH---------HHTTCSEEEEEET----TEEEEEEEHHHHT
T ss_pred ccCcccCCcchhHHHHHHHH---------HHcCCcEEEEEEC----CEEEEEEEHHHHH
Confidence 888776 89999999999 9999999999986 8999999999997
No 67
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.53 E-value=5e-15 Score=174.10 Aligned_cols=163 Identities=18% Similarity=0.165 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHhCCCceEEecccc---CcHHHHHHHHCCCCEEEEcccccccCC----Ccccccc-chhHHHHHHHHHhc
Q psy1056 357 YQIEMIKFIKKEYPDMQVIGGNVL---FGYQPRATLLNFIYQIEMIKFIKKEYP----DMQVIGR-NGTAVYRVAEYASR 428 (590)
Q Consensus 357 ~~l~~i~~i~~~~~~vpvi~g~v~---s~~~a~~l~~~Gvd~i~v~~~~~~~~~----~~~~~g~-~~~~l~~~~~~~~~ 428 (590)
.+.+.++++++.+|++||++|.+. ....|+.+.++|||+|.|+...+.... ...+||. +..+|.++.+.+..
T Consensus 1014 dl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~ 1093 (1520)
T 1ofd_A 1014 DLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLME 1093 (1520)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHh
Confidence 357889999999989999999885 468899999999999988544321100 0245788 88888888877643
Q ss_pred C----CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC-----------CCCCceEeecCeeeeeeeccccHHHHh
Q psy1056 429 R----GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS-----------EAPGEYFFSDGVRLKKYRGMGSLEAMS 493 (590)
Q Consensus 429 ~----~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~-----------es~~~~~~~~g~~~k~~~g~~s~~a~~ 493 (590)
. ++|||++|||+|+.|++|||+|||++|++|++|+.+. +||..+..++....|.|.|
T Consensus 1094 ~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L~~~~~g-------- 1165 (1520)
T 1ofd_A 1094 NQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKG-------- 1165 (1520)
T ss_dssp TTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHHHTTCCC--------
T ss_pred cCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHHHhhcCC--------
Confidence 2 4999999999999999999999999999999986655 4454433333222221111
Q ss_pred cccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 494 RKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
| ...|.++++.|..+||..|.++|+++++||+.+
T Consensus 1166 ------------------------g-------~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr 1199 (1520)
T 1ofd_A 1166 ------------------------V-------PGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGR 1199 (1520)
T ss_dssp ------------------------C-------HHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTC
T ss_pred ------------------------c-------HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCc
Confidence 1 224888899999999999999999999999643
No 68
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.53 E-value=2.8e-14 Score=137.69 Aligned_cols=126 Identities=16% Similarity=0.149 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhhcCC---Ccccccccccc---hHHHHHHHHHhcccccccccccc---CceeeEEeeCCCCCCeEEEEEe
Q psy1056 163 IYQIEMIKYIKKEYP---DMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCH---GFCGFPVTENGKLGEKLLGIVT 233 (590)
Q Consensus 163 ~~~~~~v~~vk~~~~---~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~---~~~~~pVvd~~~~~~~lvGivt 233 (590)
....+.++.+.. ++ +.++|+.++.+ +.|+.++++.| .++ +++.+||+|+ +++++|+||
T Consensus 39 ~~e~~~i~~~l~-~~~~~v~~iM~~~~~~v~~~~tv~eal~~~---------~~~~~~~~~~~~Vvd~---~~~lvGivt 105 (205)
T 3kxr_A 39 ERQRQRFELYDQ-YSENEIGRYTDHQMLVLSDKATVAQAQRFF---------RRIELDCNDNLFIVDE---ADKYLGTVR 105 (205)
T ss_dssp HHHHHHHHHHHH-SCTTCGGGGCBCCCCEEETTCBHHHHHHHH---------HHCCCTTCCEEEEECT---TCBEEEEEE
T ss_pred HHHHHHHHHHhC-CCcchHHhhccCceEEECCCCcHHHHHHHH---------HhhCccCeeEEEEEcC---CCeEEEEEE
Confidence 345555665555 54 46789888766 89999999999 776 7899999998 799999999
Q ss_pred cchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 234 SRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 234 ~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.+|+.... ...+++++|++ +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++...
T Consensus 106 ~~dll~~~----~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 106 RYDIFKHE----PHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVR 173 (205)
T ss_dssp HHHHTTSC----TTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHHHHhCC----CcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 99997542 34789999998 9999999999999999999999999999999999999999999998754
No 69
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.52 E-value=1.1e-14 Score=132.31 Aligned_cols=119 Identities=23% Similarity=0.365 Sum_probs=100.9
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcccc--------
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLEN-------- 242 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~-------- 242 (590)
.+..++|.. ++.+ ++++.++++.| .+++++++||+|+ +++++|++|.+|+.....
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~G~vt~~dl~~~~~~~~~~~~~ 72 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELL---------VENRITGFPVIDE---DWKLVGLVSDYDLLALDSGDSTWKTF 72 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHH---------HHTTCSEEEEECT---TCBEEEEEEHHHHTTCC----CCHHH
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHH---------HHcCCceEEEEeC---CCeEEEEEEHHHHHHhhcccCcccch
Confidence 344568877 4544 89999999999 9999999999998 689999999999973210
Q ss_pred -------ccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 243 -------SANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 243 -------~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
......++.++|.+ +++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++....
T Consensus 73 ~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 73 NAVQKLLSKTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp HHHHTC-----CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHHHHHHhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 11235789999998 89999999999999999999999999999999999999999999997653
No 70
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.52 E-value=1.2e-14 Score=129.49 Aligned_cols=116 Identities=20% Similarity=0.337 Sum_probs=99.9
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-ccccccccchhh
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-ENSANMDLKIEK 252 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~~~~~~~~V~~ 252 (590)
+..++|..++.+ ++++.++++.| .+++++.+||+++ ++++|++|.+|+... ........++++
T Consensus 5 ~v~~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~----~~~~Givt~~dl~~~~~~~~~~~~~v~~ 71 (133)
T 2ef7_A 5 IVKEYMKTQVISVTKDAKLNDIAKVM---------TEKNIGSVIVVDG----NKPVGIITERDIVKAIGKGKSLETKAEE 71 (133)
T ss_dssp BGGGTSBCSCCEEETTCBHHHHHHHH---------HHHTCSEEEEEET----TEEEEEEEHHHHHHHHHTTCCTTCBGGG
T ss_pred cHHHhccCCCEEECCCCcHHHHHHHH---------HhcCCCEEEEEEC----CEEEEEEcHHHHHHHHhcCCCcccCHHH
Confidence 344578776555 88999999999 9999999999995 899999999999732 222223578999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+|.+ +++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++...
T Consensus 72 ~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 72 FMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp TSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 9998 9999999999999999999999999999999999999999999998654
No 71
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.50 E-value=2.4e-14 Score=130.37 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=98.7
Q ss_pred CCCccccc--ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccc-c------c
Q psy1056 176 YPDMQVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLE-N------S 243 (590)
Q Consensus 176 ~~~~~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~-~------~ 243 (590)
.+..++|. .++.+ ++++.+|++.| .+++++++||+|+ +++++|+||.+|+.... . .
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~---------~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~ 82 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVL---------VKSGYSAIPVLDP---MYKLHGLISTAMILDGILGLERIEFE 82 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEEEEEEHHHHHHHTBCSSSBCGG
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHH---------HHcCCcEEEEECC---CCCEEEEEEHHHHHHHHHhhcccchh
Confidence 44456887 34544 88999999999 9999999999997 69999999999997221 1 1
Q ss_pred cccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 244 ANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 244 ~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.....++.++|.+ +++++++++++.+|+++|.++++ +||+|++|+++|+||..|+++...
T Consensus 83 ~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 83 RLEEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLN 142 (150)
T ss_dssp GGGGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHhcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHH
Confidence 2246889999998 99999999999999999999987 999999999999999999998754
No 72
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.50 E-value=2.6e-14 Score=128.13 Aligned_cols=117 Identities=14% Similarity=0.270 Sum_probs=101.0
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh--ccccccccccchh
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD--FLENSANMDLKIE 251 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~--~~~~~~~~~~~V~ 251 (590)
+..++|..++.+ ++++.++++.| .+++++.+||+|+ +++++|+||.+|+. ..........++.
T Consensus 8 ~v~~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~v~ 75 (138)
T 2yzi_A 8 PIKVYMTKKLLGVKPSTSVQEASRLM---------MEFDVGSLVVIND---DGNVVGFFTKSDIIRRVIVPGLPYDIPVE 75 (138)
T ss_dssp BGGGTCBCCCCEECTTSBHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHHHHTTTTCCCTTSBGG
T ss_pred hHHHHhcCCCeEECCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCcEEEEEeHHHHHHHHHhcCCcccCCHH
Confidence 344578776655 88999999999 9999999999997 69999999999995 2322223468899
Q ss_pred hccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 252 KVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 252 ~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
++|.+ +++++++++++.+|+++|.+++++++ |+|++|+++|+||..|+++....
T Consensus 76 ~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 76 RIMTR--NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp GTCBC--SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred HHhhC--CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 99998 99999999999999999999999999 99989999999999999987653
No 73
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.50 E-value=2.1e-14 Score=127.81 Aligned_cols=114 Identities=15% Similarity=0.308 Sum_probs=98.4
Q ss_pred cccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh--cccc-ccccccchhh
Q psy1056 179 MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD--FLEN-SANMDLKIEK 252 (590)
Q Consensus 179 ~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~--~~~~-~~~~~~~V~~ 252 (590)
.++|..++.+ ++++.++++.| .+++++++||+|+ +++++|++|.+|+. .... ......++++
T Consensus 11 ~~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 78 (133)
T 1y5h_A 11 RDIMNAGVTCVGEHETLTAAAQYM---------REHDIGALPICGD---DDRLHGMLTDRDIVIKGLAAGLDPNTATAGE 78 (133)
T ss_dssp HHHSEETCCCEETTSBHHHHHHHH---------HHHTCSEEEEECG---GGBEEEEEEHHHHHHTTGGGTCCTTTSBHHH
T ss_pred HHHhcCCceEeCCCCCHHHHHHHH---------HHhCCCeEEEECC---CCeEEEEEeHHHHHHHHHhcCCCccccCHHH
Confidence 3477766555 88999999999 9999999999987 69999999999997 2222 2223588999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+|.+ +++++++++++.+++++|.+++.+.+||+|+ |+++|+||.+|+++...
T Consensus 79 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 79 LARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp HHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred HhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 9998 9999999999999999999999999999998 99999999999998753
No 74
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.49 E-value=2.6e-14 Score=125.57 Aligned_cols=112 Identities=22% Similarity=0.252 Sum_probs=97.2
Q ss_pred ccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc--ccccccccchhhcc
Q psy1056 180 QVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL--ENSANMDLKIEKVM 254 (590)
Q Consensus 180 ~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~--~~~~~~~~~V~~im 254 (590)
++|..++.+ ++++.++++.| .+++++.+||+|+ ++++|++|.+|+... ........++.++|
T Consensus 5 ~~m~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~----~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m 71 (125)
T 1pbj_A 5 DVMVTDVDTIDITASLEDVLRNY---------VENAKGSSVVVKE----GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVM 71 (125)
T ss_dssp HHCBCSCCEEETTCBHHHHHHHH---------HHHCCCEEEEEET----TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHC
T ss_pred HhcCCCceEECCCCcHHHHHHHH---------HHcCCCEEEEEeC----CeeEEEEeHHHHHHHHhcCCcccccCHHHHc
Confidence 367666554 88999999999 9999999999995 999999999999732 22222468899999
Q ss_pred ccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 255 TNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 255 ~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.+ +++++++++++.++++.|.+++++.+||+|+ |+++|+||.+|+++...
T Consensus 72 ~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 72 ER--DLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp BC--GGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred CC--CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 98 9999999999999999999999999999998 99999999999998754
No 75
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.49 E-value=5.1e-14 Score=132.03 Aligned_cols=117 Identities=14% Similarity=0.133 Sum_probs=98.4
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCC-CeEEEEEecchhhccccccccccc
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLG-EKLLGIVTSRDVDFLENSANMDLK 249 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~-~~lvGivt~~Dl~~~~~~~~~~~~ 249 (590)
.+..++|+. ++.+ ++++.++++.| .+++++++||+++ + ++++|+||.+|++...... ...+
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m---------~~~~~~~~pVvd~---~~~~lvGivt~~Dl~~~~~~~-~~~~ 102 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQL---------TAAPHSFFPVCRG---SLDEVVGIGRAKDLVADLITE-GRVR 102 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHH---------HHSSCSEEEEESS---STTSEEEEEEHHHHHHHHHHH-SSCC
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHH---------HhCCCCEEEEEeC---CCCCEEEEEEHHHHHHHHhcC-Ccch
Confidence 556779963 4444 89999999999 9999999999987 5 7999999999998432111 2467
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCC
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYP 309 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~ 309 (590)
++ |.+ +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++.+...
T Consensus 103 v~--~~~--~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 103 RN--RLR--DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp GG--GSB--CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred hH--hcC--CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 77 445 889999999999999999999999999999999999999999999987643
No 76
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.49 E-value=2.9e-14 Score=131.64 Aligned_cols=116 Identities=22% Similarity=0.320 Sum_probs=99.1
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccc----------cc
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLE----------NS 243 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~----------~~ 243 (590)
+..++|..++.+ ++++.+|++.| .+++++.+||+|+ +++++|+||.+|+.... ..
T Consensus 6 ~v~dim~~~~~~v~~~~tl~~a~~~m---------~~~~~~~~pVvd~---~~~lvGivt~~dl~~~~~~~~~~~~~~~~ 73 (160)
T 2o16_A 6 KVEDMMTRHPHTLLRTHTLNDAKHLM---------EALDIRHVPIVDA---NKKLLGIVSQRDLLAAQESSLQRSAQGDS 73 (160)
T ss_dssp BGGGTSEESCCCBCTTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEEEEEEHHHHHHHHHHHCC-------
T ss_pred cHHHHhcCCCeEECCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCcEEEEEeHHHHHHHHHHhhcccccccc
Confidence 344588776655 88999999999 9999999999997 69999999999997321 11
Q ss_pred cccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 244 ANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 244 ~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.....++.++|.+ +++++++++++.+|+++|.+++++.+||+|+ |+++|+||.+||++...
T Consensus 74 ~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 74 LAFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp --CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred hhcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 2246889999998 9999999999999999999999999999998 99999999999998643
No 77
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.49 E-value=4.2e-14 Score=129.69 Aligned_cols=115 Identities=16% Similarity=0.261 Sum_probs=97.6
Q ss_pred CCccccc--ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccc-cc-----cc
Q psy1056 177 PDMQVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLE-NS-----AN 245 (590)
Q Consensus 177 ~~~~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~-~~-----~~ 245 (590)
+..++|+ .++.+ ++++.++++.| .+++++++||+|+ +++++|++|.+|+.... .. .+
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m---------~~~~~~~~~Vvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~ 83 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLL---------SQMTYTRVPVVTD---EKQFVGTIGLRDIMAYQMEHDLSQEIM 83 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHH---------TTCSSSEEEEECC----CBEEEEEEHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHH---------HHCCCceEeEECC---CCEEEEEEcHHHHHHHHHhcccccccc
Confidence 4456887 55554 89999999999 9999999999997 69999999999998321 11 11
Q ss_pred cccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 246 MDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 246 ~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
...++.++|++ +++++++++++.+|+++|.+++ ++||+|++|+++|+||.+|+++...
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 84 ADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp TTSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHH
T ss_pred ccCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 25889999998 9999999999999999999886 6999999999999999999998764
No 78
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.49 E-value=2.3e-14 Score=131.05 Aligned_cols=104 Identities=15% Similarity=0.237 Sum_probs=92.3
Q ss_pred hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccc-cc--cccccchhhccc------cCCC
Q psy1056 189 TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLE-NS--ANMDLKIEKVMT------NVNE 259 (590)
Q Consensus 189 ~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~-~~--~~~~~~V~~im~------~~~~ 259 (590)
++++.+|++.| .+++++.+||+|+ +++++|+||.+|+.... .. .....++.++|. + +
T Consensus 37 ~~~~~~a~~~m---------~~~~~~~~pVvd~---~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~--~ 102 (152)
T 2uv4_A 37 TTPVYVALGIF---------VQHRVSALPVVDE---KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--G 102 (152)
T ss_dssp TCBHHHHHHHH---------HHHCCSEEEEECT---TSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHH--T
T ss_pred CCcHHHHHHHH---------HHcCCceEeEECC---CCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccC--C
Confidence 88999999999 9999999999997 69999999999998321 11 123578999996 6 8
Q ss_pred eeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 260 IISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 260 ~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++..
T Consensus 103 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 103 VLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp CSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 99999999999999999999999999999999999999999998864
No 79
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.49 E-value=6.1e-14 Score=132.59 Aligned_cols=116 Identities=15% Similarity=0.264 Sum_probs=100.5
Q ss_pred Ccccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-c--cccccccchh
Q psy1056 178 DMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-E--NSANMDLKIE 251 (590)
Q Consensus 178 ~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~--~~~~~~~~V~ 251 (590)
..++|..++.+ ++++.+|++.| .+++++++||+++ +++++|++|.+|+... . .......+++
T Consensus 11 v~~im~~~~~~v~~~~~l~ea~~~~---------~~~~~~~~pVvd~---~g~~vGivt~~dl~~~~~~~~~~~~~~~v~ 78 (184)
T 1pvm_A 11 VEKIMNSNFKTVNWNTTVFDAVKIM---------NENHLYGLVVKDD---NGNDVGLLSERSIIKRFIPRNKKPDEVPIR 78 (184)
T ss_dssp GGGTSBTTCCEEETTCBHHHHHHHH---------HHHTCCEEEEECT---TSCEEEEEEHHHHHHHTGGGCCCGGGSBGG
T ss_pred HHHhcCCCCeEECCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCcEEEEEeHHHHHHHHhhcccCcccCCHH
Confidence 34578776655 88999999999 9999999999987 6899999999999732 2 1123457899
Q ss_pred hccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 252 KVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 252 ~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
++|.+ +++++++++++.+|+++|.+++.+.+||+|++|+++|+||..||++...
T Consensus 79 ~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 79 LVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GTSBS--SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred HHhCC--CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 99998 9999999999999999999999999999999899999999999998643
No 80
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.48 E-value=2.3e-14 Score=134.32 Aligned_cols=114 Identities=20% Similarity=0.359 Sum_probs=98.6
Q ss_pred ccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccc---c---------
Q psy1056 180 QVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLE---N--------- 242 (590)
Q Consensus 180 ~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~---~--------- 242 (590)
++|.. ++.+ ++++.+|++.| .+++++++||+|+ +++++|+||.+|+.... .
T Consensus 8 dim~~~~~~~~v~~~~~l~~a~~~m---------~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 75 (180)
T 3sl7_A 8 DFMTPRQNLHVVKPSTSVDDALELL---------VEKKVTGLPVIDD---NWTLVGVVSDYDLLALDSISGRSQNDTNLF 75 (180)
T ss_dssp HHSEEGGGCCCBCTTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEEEEEEHHHHTCC--------------
T ss_pred HhcCCCCCceeeCCCCcHHHHHHHH---------HHcCCCeEEEECC---CCeEEEEEEHHHHHhhhhhccccCCccccc
Confidence 47766 4544 89999999999 9999999999998 69999999999997321 0
Q ss_pred -----------------ccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccc
Q psy1056 243 -----------------SANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKS 305 (590)
Q Consensus 243 -----------------~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~ 305 (590)
......+++++|++ +++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 76 PDVDSTWKTFNELQKLISKTYGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRA 153 (180)
T ss_dssp -----CCCSHHHHHHHHHTTTTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHH
T ss_pred ccccchhhhhHHHHHHHhccccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHH
Confidence 01235789999998 89999999999999999999999999999999999999999999987
Q ss_pred cC
Q psy1056 306 RD 307 (590)
Q Consensus 306 ~~ 307 (590)
..
T Consensus 154 ~~ 155 (180)
T 3sl7_A 154 AL 155 (180)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 81
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.47 E-value=6.1e-14 Score=128.56 Aligned_cols=117 Identities=17% Similarity=0.166 Sum_probs=99.9
Q ss_pred CCCcccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-cc------c
Q psy1056 176 YPDMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-EN------S 243 (590)
Q Consensus 176 ~~~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~------~ 243 (590)
.+..++|.. ++.+ ++++.+|++.| .+++++++||+|+ +++++|+||.+|+... .. .
T Consensus 11 ~~v~~im~~~~~~~~v~~~~~~~~a~~~m---------~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~ 78 (157)
T 2emq_A 11 MTVKPFLIPADKVAHVQPGNYLDHALLVL---------TKTGYSAIPVLDT---SYKLHGLISMTMMMDAILGLERIEFE 78 (157)
T ss_dssp CBSTTTCEEGGGSCCBCTTSBHHHHHHHH---------HHSSSSEEEEECT---TCCEEEEEEHHHHHHHSBCSSSBCGG
T ss_pred CcHHhhccCCccceEECCCCcHHHHHHHH---------HHCCceEEEEEcC---CCCEEEEeeHHHHHHHHhcccccchH
Confidence 455568875 5544 88999999999 9999999999997 6999999999999732 11 1
Q ss_pred cccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 244 ANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 244 ~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
.....++.++|.+ +++++++++++.+|+++|.++++ +||+|++|+++|+||.+|+++....
T Consensus 79 ~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 79 RLETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GGGTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred HhcCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 2246789999998 99999999999999999999988 9999999999999999999987653
No 82
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.47 E-value=5e-14 Score=125.82 Aligned_cols=112 Identities=23% Similarity=0.362 Sum_probs=96.7
Q ss_pred cccc---ccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhc-cc-c-ccccccch
Q psy1056 180 QVIG---GNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDF-LE-N-SANMDLKI 250 (590)
Q Consensus 180 ~im~---~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~-~~-~-~~~~~~~V 250 (590)
++|. .++.+ ++++.++++.| .+++++++||+|+ ++++|++|.+|+.. .. . ......++
T Consensus 10 ~im~~~~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~----~~~~Givt~~dl~~~~~~~~~~~~~~~v 76 (135)
T 2rc3_A 10 HLLQEKGHTVVAIGPDDSVFNAMQKM---------AADNIGALLVMKD----EKLVGILTERDFSRKSYLLDKPVKDTQV 76 (135)
T ss_dssp HHHHHHCCCCCEECTTSBHHHHHHHH---------HHHTCSEEEEEET----TEEEEEEEHHHHHHHGGGSSSCGGGSBG
T ss_pred HHHhcCCCCcEEECCCCcHHHHHHHH---------HhcCCCEEEEEEC----CEEEEEEehHHHHHHHHHcCCCcccCCH
Confidence 4676 55544 88999999999 9999999999985 89999999999972 22 1 12346889
Q ss_pred hhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 251 EKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 251 ~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.++|.+ +++++++++++.+|+++|.+++++.+||+| +|+++|+||.+|+++...
T Consensus 77 ~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 77 KEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred HHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 999998 999999999999999999999999999999 799999999999998653
No 83
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=6.1e-14 Score=130.10 Aligned_cols=115 Identities=21% Similarity=0.284 Sum_probs=99.3
Q ss_pred cccccc---cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-ccc--cccccc
Q psy1056 179 MQVIGG---NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-ENS--ANMDLK 249 (590)
Q Consensus 179 ~~im~~---~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~~--~~~~~~ 249 (590)
.++|.. ++.+ ++++.+|++.| .+++++.+||+|+ +++++|+||.+|+... ... .....+
T Consensus 27 ~dim~~~~~~~~~v~~~~~l~~a~~~~---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 27 KDLLDRKGRDVVTVGPDVSIGEAAGTL---------HAHKIGAVVVTDA---DGVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp HHHHHHHCSCCCEECTTSBHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred HHHhccCCCCCeEECCCCCHHHHHHHH---------HHcCCCEEEEEcC---CCeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 447764 3433 88999999999 9999999999998 6999999999999722 111 234688
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
+.++|.+ +++++++++++.+|+++|.+++++.+||+|+ |+++|+||..||++....
T Consensus 95 v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 95 VSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGGTSBS--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred HHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 9999998 9999999999999999999999999999998 999999999999998654
No 84
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.43 E-value=1.1e-13 Score=124.51 Aligned_cols=114 Identities=14% Similarity=0.239 Sum_probs=95.0
Q ss_pred cccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-ccc--cccccchhhcc
Q psy1056 181 VIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-ENS--ANMDLKIEKVM 254 (590)
Q Consensus 181 im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~~--~~~~~~V~~im 254 (590)
+|..++.+ ++++.++++.| .+++++.+||+|+ +++++|++|.+|+... ... .....++.++|
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 83 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQML---------TQGRVSSVPIIDE---NGYLINVYEAYDVLGLIKGGIYNDLSLSVGEAL 83 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEEEEEEHHHHHHHHHTC----CCSBHHHHH
T ss_pred CCCCCceEECCCCcHHHHHHHH---------HHcCcceeeEEcC---CCcEEEEEcHHHHHHHhcccccccCCccHHHHH
Confidence 56555554 88999999999 9999999999997 6999999999999832 111 12357899999
Q ss_pred ccCC----CeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccccc
Q psy1056 255 TNVN----EIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSR 306 (590)
Q Consensus 255 ~~~~----~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~ 306 (590)
.+.. +++++++++++.+++++|.+++.+.+||+|++|+++|+||.+|+++..
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l 139 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYI 139 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHH
Confidence 8521 578999999999999999999999999999999999999999998864
No 85
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.43 E-value=1.2e-13 Score=126.87 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=96.9
Q ss_pred ccccccccc---hHHHHHHHHHhccccccccccccCcee-eEEeeCCCCCCeEEEEEecchhhccc--------------
Q psy1056 180 QVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCG-FPVTENGKLGEKLLGIVTSRDVDFLE-------------- 241 (590)
Q Consensus 180 ~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~-~pVvd~~~~~~~lvGivt~~Dl~~~~-------------- 241 (590)
++|..++.+ ++++.+|++.| .+++++. +||+|+ + +++|+||.+|+....
T Consensus 20 ~im~~~~~~v~~~~tl~ea~~~m---------~~~~~~~~~~Vvd~---~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 20 KLISLKPTVVEEDTPIEEIVDRI---------LEDPVTRTVYVARD---N-KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TSSCCCCEEECTTCBHHHHHHHH---------HHSTTCCEEEEEET---T-EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hcccCCCceECCCCCHHHHHHHH---------HhCCCCccEEEEEC---C-EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 478776655 88999999999 9999999 999998 5 999999999997321
Q ss_pred ---cccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 242 ---NSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 242 ---~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
.......+++++|.+ ++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++...
T Consensus 87 ~~~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp --CCCCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 012346789999984 789999999999999999999999999998999999999999998653
No 86
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.43 E-value=8.8e-14 Score=128.05 Aligned_cols=114 Identities=13% Similarity=0.120 Sum_probs=97.6
Q ss_pred Ccccccc--cccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-cc-c-----cc
Q psy1056 178 DMQVIGG--NVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-EN-S-----AN 245 (590)
Q Consensus 178 ~~~im~~--~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~-~-----~~ 245 (590)
..++|.. ++.+ ++++.++++.| .+++++.+||+|+ +++++|+||.+|+... .. . ..
T Consensus 16 v~~im~~~~~~~~v~~~~~l~~a~~~m---------~~~~~~~~pVvd~---~~~lvGivt~~dl~~~~~~~~~~~~~~~ 83 (159)
T 1yav_A 16 VGQFMIEADKVAHVQVGNNLEHALLVL---------TKTGYTAIPVLDP---SYRLHGLIGTNMIMNSIFGLERIEFEKL 83 (159)
T ss_dssp HHHHSEEGGGSCCEETTCBHHHHHHHH---------HHHCCSEEEEECT---TCBEEEEEEHHHHHHHHBCSSSBCGGGT
T ss_pred HHHHhCCccceEEECCCCcHHHHHHHH---------HhCCCcEEEEECC---CCCEEEEeEHHHHHHHhhhhcccchhhh
Confidence 3457766 5554 88999999999 9999999999998 6899999999999732 11 1 12
Q ss_pred cccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 246 MDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 246 ~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
...++.++|.+ +++++.+++++.+|+++|.++++ +||+|++|+++|+||.+|+++...
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 84 DQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp TTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred ccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHH
Confidence 46889999998 99999999999999999999987 999999999999999999998754
No 87
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.42 E-value=1.4e-13 Score=126.38 Aligned_cols=105 Identities=27% Similarity=0.389 Sum_probs=92.7
Q ss_pred hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhc-c-cc-ccccccchhhccccCCCeeEEcC
Q psy1056 189 TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDF-L-EN-SANMDLKIEKVMTNVNEIISAQA 265 (590)
Q Consensus 189 ~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~-~-~~-~~~~~~~V~~im~~~~~~~tv~~ 265 (590)
++++.+|++.| .+++++.+||++ +++++|++|.+|+.. . .. ......+++++|++ +++++++
T Consensus 29 ~~~~~~a~~~~---------~~~~~~~~~V~~----~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~ 93 (157)
T 4fry_A 29 NDFVYDAIKLM---------AEKGIGALLVVD----GDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA--KVRYVEP 93 (157)
T ss_dssp TSBHHHHHHHH---------HHHTCSEEEEES----SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS--SCCCBCT
T ss_pred CCcHHHHHHHH---------HHcCCCEEEEee----CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC--CCcEECC
Confidence 89999999999 999999999965 499999999999972 2 21 12246899999998 9999999
Q ss_pred CCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCC
Q psy1056 266 GISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYP 309 (590)
Q Consensus 266 ~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~ 309 (590)
++++.+|+++|.+++++.+||+| +|+++|+||.+|+++.....
T Consensus 94 ~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 94 SQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 99999999999999999999999 79999999999999986543
No 88
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.42 E-value=1.3e-13 Score=138.47 Aligned_cols=164 Identities=16% Similarity=0.228 Sum_probs=125.0
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-ccccccccchhh
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-ENSANMDLKIEK 252 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~~~~~~~~~V~~ 252 (590)
+..++|..++.+ ++++.++++.| .+++++++||+|+ +++++|++|.+|+... ........++++
T Consensus 85 ~v~~im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~Givt~~dl~~~~~~~~~~~~~v~~ 152 (280)
T 3kh5_A 85 PVREIMEENVITLKENADIDEAIETF---------LTKNVGGAPIVND---ENQLISLITERDVIRALLDKIDENEVIDD 152 (280)
T ss_dssp BGGGTSBCSCCCEETTCBHHHHHHHH---------HHTTCSEEEEECT---TCBEEEEEEHHHHHHHHGGGSCTTCBSGG
T ss_pred hHHHhcCCCCEEECCCCCHHHHHHHH---------HhCCCCEEEEEcC---CCEEEEEEEHHHHHHHHhhcCCCCCCHHH
Confidence 445688877655 88999999999 9999999999998 7999999999999832 222223458999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCC----------------CCcccC
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPD----------------SSKDEN 316 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~----------------~~~d~~ 316 (590)
+|++ +++++++++++.++++.|.+++++.+||+ ++|+++|+||.+|+++...... ...+..
T Consensus 153 ~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m 229 (280)
T 3kh5_A 153 YITR--DVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIM 229 (280)
T ss_dssp GCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHS
T ss_pred HhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHh
Confidence 9998 99999999999999999999999999999 6899999999999998764210 001111
Q ss_pred CceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhh
Q psy1056 317 NQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIY 357 (590)
Q Consensus 317 ~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~ 357 (590)
.+- ...+.+..+..+.++.|.+.+...+.|...+|...|
T Consensus 230 ~~~--~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~G 268 (280)
T 3kh5_A 230 KRD--VITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKG 268 (280)
T ss_dssp BSS--CCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEE
T ss_pred cCC--CEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEE
Confidence 010 123445567778888888888887777655554433
No 89
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.38 E-value=3.1e-13 Score=124.55 Aligned_cols=117 Identities=11% Similarity=0.212 Sum_probs=97.0
Q ss_pred Ccccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhccc-cc-----ccccc
Q psy1056 178 DMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFLE-NS-----ANMDL 248 (590)
Q Consensus 178 ~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~-~~-----~~~~~ 248 (590)
..++|..++.+ ++++.+|++.| .+++++++||+|+. .+++++|+||.+|+.... .. .....
T Consensus 15 v~dim~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~pVvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 84 (164)
T 2pfi_A 15 VEHFMNHSITTLAKDTPLEEVVKVV---------TSTDVTEYPLVEST-ESQILVGIVQRAQLVQALQAEPPSRAPGHQQ 84 (164)
T ss_dssp HHHHCBCCCCCEETTCBHHHHHHHH---------HTCCCSEEEEESCT-TTCBEEEEEEHHHHHHHHHC-------CCCC
T ss_pred HHHHcCCCCeEECCCCcHHHHHHHH---------HhCCCCceeEEecC-CCCEEEEEEEHHHHHHHHHhhccccCCcccc
Confidence 34578776655 88999999999 99999999999840 048999999999997321 11 01246
Q ss_pred chhhccccCCC------eeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 249 KIEKVMTNVNE------IISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 249 ~V~~im~~~~~------~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
++.++|.+ + ++++++++++.+|+++|.+++++.+||+| +|+++|+||.+|+++...
T Consensus 85 ~v~~~m~~--~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 85 CLQDILAR--GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp BHHHHHHT--TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred hhhhhhcc--cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 89999987 6 78999999999999999999999999999 799999999999998754
No 90
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.36 E-value=1.1e-12 Score=132.54 Aligned_cols=125 Identities=12% Similarity=0.239 Sum_probs=104.6
Q ss_pred HHHHHHHhhhcC---CCcccccccccc---hHHHHHHHHHhcccccccccccc-----CceeeEEeeCCCCCCeEEEEEe
Q psy1056 165 QIEMIKYIKKEY---PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCH-----GFCGFPVTENGKLGEKLLGIVT 233 (590)
Q Consensus 165 ~~~~v~~vk~~~---~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~-----~~~~~pVvd~~~~~~~lvGivt 233 (590)
....+..+.. + ...++|+.++.+ +.++.++++.| .++ +++.+||+++ +++++|+||
T Consensus 122 ~~~~i~~~l~-~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~---------~~~~~~~~~~~~~~Vvd~---~~~lvGivt 188 (278)
T 2yvy_A 122 TRAEVEALAR-YEEDEAGGLMTPEYVAVREGMTVEEVLRFL---------RRAAPDAETIYYIYVVDE---KGRLKGVLS 188 (278)
T ss_dssp HHHHHHHHHH-SCTTBGGGTCBSCCCEECTTSBHHHHHHHH---------HHHTTTCSCSSEEEEECT---TCBEEEEEE
T ss_pred HHHHHHHHHC-CCcchHHhhcCCCceEECCCCcHHHHHHHH---------HHccCCccceeEEEEECC---CCCEEEEEE
Confidence 3444444444 3 345689877666 88999999999 765 7899999998 699999999
Q ss_pred cchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCC
Q psy1056 234 SRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 234 ~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
.+|+.... ...+++++|.+ +++++++++++.+++++|.+++++.+||+|++|+++|+||..|+++....
T Consensus 189 ~~dll~~~----~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 189 LRDLIVAD----PRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp HHHHHHSC----TTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred HHHHhcCC----CCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 99998542 35789999998 99999999999999999999999999999999999999999999987653
No 91
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.35 E-value=6.4e-13 Score=134.81 Aligned_cols=123 Identities=16% Similarity=0.257 Sum_probs=104.7
Q ss_pred HHHHHHhhhcCCC---cccccccccc---hHHHHHHHHHhcccccccccccc-----CceeeEEeeCCCCCCeEEEEEec
Q psy1056 166 IEMIKYIKKEYPD---MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCH-----GFCGFPVTENGKLGEKLLGIVTS 234 (590)
Q Consensus 166 ~~~v~~vk~~~~~---~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~-----~~~~~pVvd~~~~~~~lvGivt~ 234 (590)
...++.+.. ++. .++|+.++.+ ++++.++++.| .++ +++++||+|+ +++++|+||.
T Consensus 125 ~~~i~~ll~-~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~---------~~~~~~~~~~~~~pVvd~---~~~lvGivt~ 191 (286)
T 2oux_A 125 AGEIKELLH-YEDETAGAIMTTEFVSIVANQTVRSAMYVL---------KNQADMAETIYYVYVVDQ---ENHLVGVISL 191 (286)
T ss_dssp HHHHHHHTT-SCTTBHHHHCBSCCCEECSSSBHHHHHHHH---------HHHCSSCSCCSEEEEECT---TCBEEEEEEH
T ss_pred HHHHHHHhc-CChHHHHHhCCCCceEECCCCcHHHHHHHH---------HHcccCccceeEEEEEcC---CCeEEEEEEH
Confidence 444555543 443 4588877665 88999999999 776 7888999998 6999999999
Q ss_pred chhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 235 RDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 235 ~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+|+.... ...+++++|.+ +++++++++++.+|+++|.+++++.+||+|++|+++|+||..|+++...
T Consensus 192 ~dll~~~----~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 192 RDLIVND----DDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp HHHTTSC----TTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHHHcCC----CCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 9998542 35789999998 9999999999999999999999999999999999999999999998754
No 92
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.34 E-value=6e-13 Score=125.26 Aligned_cols=104 Identities=20% Similarity=0.303 Sum_probs=91.9
Q ss_pred hHHHHHHHHHhccccccccccccCceeeEEe--eCCCCCCeEEEEEecchhhcc-cc-----------------------
Q psy1056 189 TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVT--ENGKLGEKLLGIVTSRDVDFL-EN----------------------- 242 (590)
Q Consensus 189 ~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVv--d~~~~~~~lvGivt~~Dl~~~-~~----------------------- 242 (590)
++++.+|++.| .+++++++||+ |+ +++++|+||.+|+... ..
T Consensus 33 ~~~~~~a~~~~---------~~~~~~~~pVv~~d~---~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 33 SMTVEDVETII---------SETTYSGFPVVVSRE---SQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CEEHHHHHHHH---------HHCCCSEEEEESCTT---TCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred CccHHHHHHHH---------HhcCCCceeEEEECC---CCeEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 88999999999 99999999999 66 6999999999999722 11
Q ss_pred --ccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 243 --SANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 243 --~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
......++.++|.+ +++++++++++.+|+++|.+++++.+||+| +|+++|+||.+|+++...
T Consensus 101 ~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 101 PPYTPPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CTTCCCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 01235789999998 999999999999999999999999999999 899999999999998754
No 93
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.33 E-value=2.2e-12 Score=118.71 Aligned_cols=119 Identities=11% Similarity=0.209 Sum_probs=88.2
Q ss_pred hhcccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCccccc
Q psy1056 18 VKKYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPL 95 (590)
Q Consensus 18 vk~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l 95 (590)
.+..+++|+ ++++++++++|+.+|+++|.+++++++||+|++ ++++|++|.+|+...+.
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~---~~lvGiit~~Di~~~~~---------------- 74 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE---KQFVGTIGLRDIMAYQM---------------- 74 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC----CBEEEEEEHHHHHHHHH----------------
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC---CcEEEEEEecchhhhhh----------------
Confidence 445556698 488999999999999999999999999999986 79999999994311100
Q ss_pred ccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhc
Q psy1056 96 TKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKE 175 (590)
Q Consensus 96 ~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~ 175 (590)
.... .. .....
T Consensus 75 ~~~~--------------~~------------------------------------------------------~~~~~- 85 (156)
T 3k6e_A 75 EHDL--------------SQ------------------------------------------------------EIMAD- 85 (156)
T ss_dssp HHTC--------------CH------------------------------------------------------HHHTT-
T ss_pred hccc--------------cc------------------------------------------------------ccccc-
Confidence 0000 00 00001
Q ss_pred CCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 176 YPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 176 ~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
.+..++|..++.+ ++++.++++.| .++++ +||+|+ +|+++||||.+|+.
T Consensus 86 ~~v~~im~~~~~~v~~~~~l~~~~~~m---------~~~~~--lpVVd~---~g~l~GiiT~~Dil 137 (156)
T 3k6e_A 86 TDIVHMTKTDVAVVSPDFTITEVLHKL---------VDESF--LPVVDA---EGIFQGIITRKSIL 137 (156)
T ss_dssp SBGGGTCBCSCCCBCTTCCHHHHHHHT---------TTSSE--EEEECT---TSBEEEEEEHHHHH
T ss_pred cCHHHhhcCCceecccccHHHHHHHHH---------HHcCC--eEEEec---CCEEEEEEEHHHHH
Confidence 2333477776655 88999999999 87765 999998 79999999999997
No 94
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.31 E-value=3.7e-12 Score=128.08 Aligned_cols=111 Identities=21% Similarity=0.219 Sum_probs=96.3
Q ss_pred cccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhc-ccc--ccccccchhh
Q psy1056 179 MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDF-LEN--SANMDLKIEK 252 (590)
Q Consensus 179 ~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~-~~~--~~~~~~~V~~ 252 (590)
.++|..++.+ ++++.++++.| .+++++.+||+|+ +++++|++|.+|+.. ... ......++++
T Consensus 63 ~~~m~~~~~~v~~~~~l~~a~~~m---------~~~~~~~~~Vvd~---~~~~~Giit~~di~~~~~~~~~~~~~~~v~~ 130 (282)
T 2yzq_A 63 AMLVKRDVPVVKENDTLKKAAKLM---------LEYDYRRVVVVDS---KGKPVGILTVGDIIRRYFAKSEKYKGVEIEP 130 (282)
T ss_dssp -CCCBSCCCEEETTSBHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHHHHTTTTCSGGGGCBSTT
T ss_pred HHHcCCCCcEECCCCcHHHHHHHH---------HHcCCCEEEEEcC---CCEEEEEEEHHHHHHHHHhccCCcccCcHHH
Confidence 3477665444 88999999999 9999999999998 689999999999974 322 1223578999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccc
Q psy1056 253 VMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLK 303 (590)
Q Consensus 253 im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll 303 (590)
+|.+ +++++++++++.++++.|.+++++.+||+|++|+++|++|..|++
T Consensus 131 ~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 131 YYQR--YVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp TSBS--CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred HhCC--CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 9998 999999999999999999999999999999999999999999999
No 95
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.29 E-value=4.4e-12 Score=137.46 Aligned_cols=127 Identities=12% Similarity=0.238 Sum_probs=108.9
Q ss_pred hHHHHHHHHHhhhcCCC---cccccccccc---hHHHHHHHHHhcccccccccccc-----CceeeEEeeCCCCCCeEEE
Q psy1056 162 SIYQIEMIKYIKKEYPD---MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCH-----GFCGFPVTENGKLGEKLLG 230 (590)
Q Consensus 162 ~~~~~~~v~~vk~~~~~---~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~-----~~~~~pVvd~~~~~~~lvG 230 (590)
...+...++.+.+ ++. .++|+.++.+ +.+++++++.| .++ +++++||+|+ +++++|
T Consensus 139 ~~~~~~~i~~~l~-~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~---------~~~~~~~~~~~~ipVvd~---~~~lvG 205 (473)
T 2zy9_A 139 DPRTRAEVEALAR-YEEDEAGGLMTPEYVAVREGMTVEEVLRFL---------RRAAPDAETIYYIYVVDE---KGRLKG 205 (473)
T ss_dssp CHHHHHHHHHHHT-SCTTBSTTTCBSCEEEECTTCBHHHHHHHH---------HHHGGGCSEEEEEEEECT---TSBEEE
T ss_pred CHHHHHHHHHHhc-CCCCCHHHhCCCCceEeCCCCcHHHHHHHH---------HhccCCcCceeEEEEECC---CCcEEE
Confidence 4456666777765 543 5689887766 88999999999 765 5899999998 699999
Q ss_pred EEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 231 IVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 231 ivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
++|.+|+.... .+.+++++|++ ++++++++++++++++.|.+++++.+||+|++|+++|+||.+|+++...
T Consensus 206 iVt~~Dll~~~----~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 206 VLSLRDLIVAD----PRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp EEEHHHHHHSC----TTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEEHHHHhcCC----CCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHH
Confidence 99999998542 35789999998 9999999999999999999999999999999999999999999998754
No 96
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.29 E-value=2.3e-12 Score=127.70 Aligned_cols=119 Identities=14% Similarity=0.223 Sum_probs=96.4
Q ss_pred CCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhhcc-c-c----cc--
Q psy1056 176 YPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-E-N----SA-- 244 (590)
Q Consensus 176 ~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~-~-~----~~-- 244 (590)
..+.++|+.++++ ++++.++.++| .+++++++|||++. .+++++|+||.+||... . . ..
T Consensus 13 ~~v~diMt~~vvtv~~~~tv~~~~~lm---------~~~~~~~~PVVd~~-~~~~LvGiIt~~dl~~~l~~~~~~~~~~~ 82 (250)
T 2d4z_A 13 IQVGDIMVRDVTSIASTSTYGDLLHVL---------RQTKLKFFPFVDTP-DTNTLLGSIDRTEVEGLLQRRISAYRRQP 82 (250)
T ss_dssp CBTTSSSBSSCCCEETTCBHHHHHHHH---------HHCCCSEEEEESCT-TTCBEEEEEEHHHHHHHHHHHHHTTSSSC
T ss_pred CChHHhcCCCCeEECCCCCHHHHHHHH---------HhcCCCEEEEEecC-CCCeEEEEEEHHHHHHHHHHhhhhhhhhh
Confidence 3455799998877 89999999999 99999999999861 02589999999999721 0 0 00
Q ss_pred --------------------------------------------------------------------------------
Q psy1056 245 -------------------------------------------------------------------------------- 244 (590)
Q Consensus 245 -------------------------------------------------------------------------------- 244 (590)
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (250)
T 2d4z_A 83 AAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQ 162 (250)
T ss_dssp CCCCCBCCC-----------------------------------------------------------------------
T ss_pred hhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------ccccch--h-hccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecc
Q psy1056 245 --------------------NMDLKI--E-KVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTD 301 (590)
Q Consensus 245 --------------------~~~~~V--~-~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~d 301 (590)
.+..+| . .+|.+ .++++.+++++.++..+|.+.+++++||++ +|+|+||||++|
T Consensus 163 ~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkD 239 (250)
T 2d4z_A 163 VASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAE 239 (250)
T ss_dssp ----CCSCCBHHHHHHHHHHHTTCBCCTTSSCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred cCcccccccChhhhhhHHHHhcCceeccccccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHH
Confidence 011222 2 36888 999999999999999999999999999997 699999999999
Q ss_pred cccccC
Q psy1056 302 LKKSRD 307 (590)
Q Consensus 302 ll~~~~ 307 (590)
|++++.
T Consensus 240 l~kai~ 245 (250)
T 2d4z_A 240 IQAAIE 245 (250)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 97
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.28 E-value=9.2e-12 Score=110.32 Aligned_cols=112 Identities=18% Similarity=0.218 Sum_probs=84.7
Q ss_pred hhhcccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccc
Q psy1056 17 KVKKYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSP 94 (590)
Q Consensus 17 ~vk~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~ 94 (590)
+|+++ |+ .+++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+ |++.... +...+
T Consensus 6 ~v~di---M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--~~~~~Givt~~--dl~~~~~--------~~~~~ 70 (129)
T 3jtf_A 6 TVADI---MVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDD--RDNIIGILLAK--DLLRYML--------EPALD 70 (129)
T ss_dssp BHHHH---CEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSS--TTCEEEEEEGG--GGGGGGT--------CTTSC
T ss_pred CHHHh---CccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCC--CCcEEEEEEHH--HHHhHhc--------cCCcC
Confidence 45555 99 778999999999999999999999999999872 15999999999 4431000 00000
Q ss_pred cccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhh
Q psy1056 95 LTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKK 174 (590)
Q Consensus 95 l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~ 174 (590)
+
T Consensus 71 v------------------------------------------------------------------------------- 71 (129)
T 3jtf_A 71 I------------------------------------------------------------------------------- 71 (129)
T ss_dssp G-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCcccccccccc--hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 175 EYPDMQVIGGNVVT--TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 175 ~~~~~~im~~~~~~--~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
.++|..++.+ ++++.++++.| .+++.+.+||+|+ +|+++|+||..|+.
T Consensus 72 ----~~~m~~~~~v~~~~~l~~~~~~m---------~~~~~~~~pVvd~---~g~~~Giit~~Dil 121 (129)
T 3jtf_A 72 ----RSLVRPAVFIPEVKRLNVLLREF---------RASRNHLAIVIDE---HGGISGLVTMEDVL 121 (129)
T ss_dssp ----GGGCBCCCEEETTCBHHHHHHHH---------HTSSCCEEEEECC----CCEEEEEEHHHHH
T ss_pred ----HHHhCCCeEeCCCCcHHHHHHHH---------HhcCCeEEEEEeC---CCCEEEEEEHHHHH
Confidence 1134333222 77889999999 9999999999998 69999999999997
No 98
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.28 E-value=5.6e-11 Score=121.85 Aligned_cols=166 Identities=17% Similarity=0.129 Sum_probs=114.6
Q ss_pred hHHHHHHHHHH-cCCcEEEEecC-----CC------chhhHHHHHHHHHHhCCCceEEecc---ccC-cHHHHHHHHCCC
Q psy1056 330 ADKNRLKLLSQ-AGVDVVILDSS-----QG------NSIYQIEMIKFIKKEYPDMQVIGGN---VLF-GYQPRATLLNFI 393 (590)
Q Consensus 330 ~~~e~~~~li~-~gad~i~V~~~-----~G------~~~~~l~~i~~i~~~~~~vpvi~g~---v~s-~~~a~~l~~~Gv 393 (590)
+..+.++.+.+ +|+|.+.++.. +| +...+.+.++.+++.. ++|+++|- +.+ .+.++.+.++|+
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G~ 190 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAGA 190 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCSHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCChHHHHHHHHHHHHcCC
Confidence 44455666666 89999988753 11 2345678899999887 68998863 334 345899999999
Q ss_pred CEEEEcc-------cc-cccC------CCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 394 YQIEMIK-------FI-KKEY------PDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 394 d~i~v~~-------~~-~~~~------~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
|+|.++. +. ++.. .++.+.......+..+++..+..++|||++|||+++.|+.+++++|||+|++|
T Consensus 191 d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 191 DGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp SEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred CEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 9998832 11 1100 00111000011223344444445799999999999999999999999999999
Q ss_pred ccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhh
Q psy1056 460 SLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCG 539 (590)
Q Consensus 460 ~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~ 539 (590)
+.|... | .++..+..+
T Consensus 271 ~~~l~~---p-------------------------------------------------------------~~~~~i~~~ 286 (311)
T 1ep3_A 271 TANFAD---P-------------------------------------------------------------FVCPKIIDK 286 (311)
T ss_dssp THHHHC---T-------------------------------------------------------------THHHHHHHH
T ss_pred HHHHcC---c-------------------------------------------------------------HHHHHHHHH
Confidence 988311 0 136788889
Q ss_pred hhhhCcccCcCcHHHHHHhhc
Q psy1056 540 LKHGCQDIGAKSLSNLRAMMY 560 (590)
Q Consensus 540 l~~~m~~~G~~~i~~l~~~~~ 560 (590)
++..|...|++|++||+..+.
T Consensus 287 l~~~~~~~g~~~~~~~~g~~~ 307 (311)
T 1ep3_A 287 LPELMDQYRIESLESLIQEVK 307 (311)
T ss_dssp HHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHhChhc
Confidence 999999999999999998743
No 99
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.27 E-value=3.9e-10 Score=116.25 Aligned_cols=126 Identities=22% Similarity=0.194 Sum_probs=92.1
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
.+.++.+.+.|++++.++.. .+ .+.++++++. +++++. .+.+.+.++.+.++|+|+|.+.. ....|..|
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g--~p---~~~~~~l~~~--g~~v~~-~v~s~~~a~~a~~~GaD~i~v~g---~~~GG~~G 160 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAG--NP---TKYIRELKEN--GTKVIP-VVASDSLARMVERAGADAVIAEG---MESGGHIG 160 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESS--CC---HHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSCEEEEC---TTSSEECC
T ss_pred HHHHHHHHHCCCCEEEECCC--Cc---HHHHHHHHHc--CCcEEE-EcCCHHHHHHHHHcCCCEEEEEC---CCCCccCC
Confidence 45677788899999887543 33 3455666664 677765 78899999999999999996632 11111111
Q ss_pred ccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCce
Q psy1056 412 IGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEY 472 (590)
Q Consensus 412 ~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~ 472 (590)
.. +...+.++. +..++|||++|||+++.|+++++++||++|++|+.|..+.||+++.
T Consensus 161 -~~~~~~ll~~i~---~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~~ 218 (326)
T 3bo9_A 161 -EVTTFVLVNKVS---RSVNIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHP 218 (326)
T ss_dssp -SSCHHHHHHHHH---HHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSCCSCH
T ss_pred -CccHHHHHHHHH---HHcCCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccccccH
Confidence 12 333344443 3347999999999999999999999999999999999999998763
No 100
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.26 E-value=2.6e-12 Score=144.21 Aligned_cols=116 Identities=9% Similarity=0.122 Sum_probs=96.8
Q ss_pred Cccccc--ccccc---hHHHHHHHHHhcccccccccc-ccCceeeEEeeCCCCCCeEEEEEecchhhcccccc-------
Q psy1056 178 DMQVIG--GNVVT---TDQAKNLIDAGVDGLRVGSHG-CHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSA------- 244 (590)
Q Consensus 178 ~~~im~--~~~~~---~~~~~~a~~~m~~~~~v~~~~-~~~~~~~pVvd~~~~~~~lvGivt~~Dl~~~~~~~------- 244 (590)
..++|+ +++.+ +++++++.+.| . +++++++||+|+ +++++|+||.+|++......
T Consensus 455 V~diM~p~~~v~~v~~~~t~~e~~~~~---------~~~~~~~~~PVvd~---~~~lvGiVt~~DL~~~l~~~~~~~~~~ 522 (632)
T 3org_A 455 AREIMHPIEGEPHLFPDSEPQHIKGIL---------EKFPNRLVFPVIDA---NGYLLGAISRKEIVDRLQHVLEDVPEP 522 (632)
T ss_dssp HHHHCBCTTTSCCBCSSSCHHHHHHHH---------HHSTTCCEECBBCT---TCBBCCEESHHHHTTTTTTC-------
T ss_pred HHHHhhcCCCceEecCCCcHHHHHHHH---------HhcCCcceEEEEec---CCeEEEEEEHHHHHHHHHHHhhhcccc
Confidence 346888 66665 89999999999 9 899999999998 79999999999998321100
Q ss_pred ------------------------------------------ccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCC
Q psy1056 245 ------------------------------------------NMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKG 282 (590)
Q Consensus 245 ------------------------------------------~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~ 282 (590)
....+++++|++ +++++++++++.+++++|.+++++
T Consensus 523 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~ 600 (632)
T 3org_A 523 IAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPS 600 (632)
T ss_dssp ------------------------------------------------CCSCCC--CCCEEETTCBHHHHHHHHHHTCCS
T ss_pred cccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcC--CCceecCCCcHHHHHHHHHhcCCC
Confidence 000137889999 999999999999999999999999
Q ss_pred cceEEcCCCceEEEEeecccccccCC
Q psy1056 283 KLPILNDKGELIALIARTDLKKSRDY 308 (590)
Q Consensus 283 ~lpVvd~~g~l~Giit~~dll~~~~~ 308 (590)
++||+ ++|+++|+||++|+++....
T Consensus 601 ~lpVv-e~G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 601 MIYVT-ERGKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp EEEEE-ETTEEEEEEEGGGTEECCCC
T ss_pred EEEEE-ECCEEEEEEehhhHHHHHhh
Confidence 99999 78999999999999998664
No 101
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.24 E-value=3.4e-12 Score=140.46 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=99.9
Q ss_pred CCcccccccccc---h-HHHHHHHHHhccccccccccccCceeeEEee-CCCCCCeEEEEEecchhh--ccccccccccc
Q psy1056 177 PDMQVIGGNVVT---T-DQAKNLIDAGVDGLRVGSHGCHGFCGFPVTE-NGKLGEKLLGIVTSRDVD--FLENSANMDLK 249 (590)
Q Consensus 177 ~~~~im~~~~~~---~-~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd-~~~~~~~lvGivt~~Dl~--~~~~~~~~~~~ 249 (590)
+..++|+.++.+ + +++.++++.| .+++++++||+| + +++++||||.+||+ +.........+
T Consensus 385 ~V~diM~~~~vtv~~~~~tv~ea~~~m---------~~~~~~~lpVvd~~---~g~lvGiVt~~Dll~~l~~~~~~~~~~ 452 (527)
T 3pc3_A 385 AIAELELPAPPVILKSDATVGEAIALM---------KKHRVDQLPVVDQD---DGSVLGVVGQETLITQIVSMNRQQSDP 452 (527)
T ss_dssp BGGGGCCCCCSCCEETTCBHHHHHHHH---------HHHTCSEEEEECTT---TCCEEEEEEHHHHHHHHHHHCCCTTSB
T ss_pred cHHHhCcCCCeEEcCCCCcHHHHHHHH---------HHcCCCeEEEEECC---CCEEEEEEEHHHHHHHHHhccCcCCCc
Confidence 345688877766 7 8999999999 999999999999 6 68999999999997 22222334689
Q ss_pred hhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCC----CceEEEEeecccccccCCC
Q psy1056 250 IEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDK----GELIALIARTDLKKSRDYP 309 (590)
Q Consensus 250 V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~----g~l~Giit~~dll~~~~~~ 309 (590)
|+++|++ +++++++++++.+++++|.++++ +||+|++ |+++||||+.||++.+...
T Consensus 453 V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 453 AIKALNK--RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp GGGGEET--TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred HHHHhcC--CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 9999998 99999999999999999977775 7999984 9999999999999987653
No 102
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.23 E-value=1.7e-11 Score=125.91 Aligned_cols=166 Identities=17% Similarity=0.089 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHcCCc---EEEEecCC----------CchhhHHHHHHHHHHhCCCceEEecccc--CcHH----HHHHH
Q psy1056 329 EADKNRLKLLSQAGVD---VVILDSSQ----------GNSIYQIEMIKFIKKEYPDMQVIGGNVL--FGYQ----PRATL 389 (590)
Q Consensus 329 ~~~~e~~~~li~~gad---~i~V~~~~----------G~~~~~l~~i~~i~~~~~~vpvi~g~v~--s~~~----a~~l~ 389 (590)
++..+.++.+.++|+| .+.++.+. ++.+...+.++.+++.. ++|+++|-.. +.++ |+.+.
T Consensus 106 ~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~~ 184 (314)
T 2e6f_A 106 EENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVLN 184 (314)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHH
Confidence 4556778888888999 89998642 13345678889998876 6899987544 4455 78888
Q ss_pred HCC-CCEEEEccccc--------ccCCCc---cc-ccc-----chhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHH
Q psy1056 390 LNF-IYQIEMIKFIK--------KEYPDM---QV-IGR-----NGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 390 ~~G-vd~i~v~~~~~--------~~~~~~---~~-~g~-----~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kala 450 (590)
++| +|+|.++..+. +..... .. +|+ .+.++..+.+..+.. ++|||+.|||+|+.|+.++++
T Consensus 185 ~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~ 264 (314)
T 2e6f_A 185 EFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHIL 264 (314)
T ss_dssp TCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH
T ss_pred hcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHH
Confidence 999 99998743321 000000 01 122 122333344443444 799999999999999999999
Q ss_pred cCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchh
Q psy1056 451 LGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVL 530 (590)
Q Consensus 451 lGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~ 530 (590)
+|||+|++|+.|.. + | |
T Consensus 265 ~GAd~V~ig~~~l~--~-----------------~--------------------------------------p------ 281 (314)
T 2e6f_A 265 AGASMVQVGTALQE--E-----------------G--------------------------------------P------ 281 (314)
T ss_dssp HTCSSEEECHHHHH--H-----------------C--------------------------------------T------
T ss_pred cCCCEEEEchhhHh--c-----------------C--------------------------------------c------
Confidence 99999999998831 0 0 0
Q ss_pred chHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 531 RFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 531 ~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.++..+..+|+..|...|+++++||+..
T Consensus 282 ~~~~~i~~~l~~~~~~~g~~~i~~~~g~ 309 (314)
T 2e6f_A 282 GIFTRLEDELLEIMARKGYRTLEEFRGR 309 (314)
T ss_dssp THHHHHHHHHHHHHHHHTCCSSTTTTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHhch
Confidence 2478899999999999999999999875
No 103
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.23 E-value=3e-11 Score=123.98 Aligned_cols=166 Identities=15% Similarity=0.136 Sum_probs=117.3
Q ss_pred hhHHHHHHHHHHcCCc-EEEEecC--C--------CchhhHHHHHHHHHHhCCCceEEecccc--CcHH----HHHHHHC
Q psy1056 329 EADKNRLKLLSQAGVD-VVILDSS--Q--------GNSIYQIEMIKFIKKEYPDMQVIGGNVL--FGYQ----PRATLLN 391 (590)
Q Consensus 329 ~~~~e~~~~li~~gad-~i~V~~~--~--------G~~~~~l~~i~~i~~~~~~vpvi~g~v~--s~~~----a~~l~~~ 391 (590)
++..+.++.+.++|+| .+.++.+ + ++.+...+.++++++.. ++|+++|-.. +.++ |+.+.++
T Consensus 106 ~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~~~~~ 184 (311)
T 1jub_A 106 AENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEILNQF 184 (311)
T ss_dssp HHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 4566788888899999 9999864 1 13345578888888876 7899987544 3333 7788889
Q ss_pred CCCEEEEcccc--------cccCCCc---ccc-cc-----chhHHHHHHHHHhcC--CCcEEecCCCCCHHHHHHHHHcC
Q psy1056 392 FIYQIEMIKFI--------KKEYPDM---QVI-GR-----NGTAVYRVAEYASRR--GVPVIADGGVQSVGHVMKALALG 452 (590)
Q Consensus 392 Gvd~i~v~~~~--------~~~~~~~---~~~-g~-----~~~~l~~~~~~~~~~--~v~iia~GGi~~~~di~kalalG 452 (590)
|+|+|.++..+ .+..... ..+ |+ .+.++..+++..+.. ++|||+.|||+|+.|+.+++++|
T Consensus 185 G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~G 264 (311)
T 1jub_A 185 PLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCG 264 (311)
T ss_dssp CCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHT
T ss_pred CCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcC
Confidence 99999874332 0000000 011 11 112344445554445 69999999999999999999999
Q ss_pred CCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhch
Q psy1056 453 ASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRF 532 (590)
Q Consensus 453 A~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~ 532 (590)
||+|++|+.|.. + | -.+
T Consensus 265 Ad~V~vg~~~l~--~-----------------~--------------------------------------------p~~ 281 (311)
T 1jub_A 265 ATMLQIGTALHK--E-----------------G--------------------------------------------PAI 281 (311)
T ss_dssp CSEEEECHHHHH--H-----------------C--------------------------------------------THH
T ss_pred CCEEEEchHHHh--c-----------------C--------------------------------------------cHH
Confidence 999999998831 0 0 024
Q ss_pred HHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 533 LPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 533 ~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
+..+..+|+..|...|++|++||+..
T Consensus 282 ~~~i~~~l~~~l~~~g~~si~e~~g~ 307 (311)
T 1jub_A 282 FDRIIKELEEIMNQKGYQSIADFHGK 307 (311)
T ss_dssp HHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 77889999999999999999999865
No 104
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.23 E-value=1.5e-11 Score=108.65 Aligned_cols=53 Identities=21% Similarity=0.439 Sum_probs=45.3
Q ss_pred hhhcccCccccC--CEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFIRD--PVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~~~--~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+|+++ |.++ ++++++++|+.+|+++|.+++++++||+|++ .|+++|++|.+|+
T Consensus 4 ~v~di---M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--~~~~vGivt~~dl 58 (127)
T 3nqr_A 4 RVRDI---MIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISED--KDHIEGILMAKDL 58 (127)
T ss_dssp BHHHH---SEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS--TTCEEEEEEGGGG
T ss_pred CHHHh---cccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC--CCcEEEEEEHHHH
Confidence 35555 9954 9999999999999999999999999999863 1499999999943
No 105
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.22 E-value=1.3e-11 Score=107.83 Aligned_cols=51 Identities=24% Similarity=0.438 Sum_probs=46.4
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~D 73 (590)
+|++. |.++++++++++|+.+|+++|.+++++.+||+|++ |+++|++|.+|
T Consensus 2 ~v~~i---m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~G~vt~~d 52 (122)
T 3kpb_A 2 LVKDI---LSKPPITAHSNISIMEAAKILIKHNINHLPIVDEH---GKLVGIITSWD 52 (122)
T ss_dssp BHHHH---CCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTT---SBEEEEECHHH
T ss_pred chHHh---hCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC---CCEEEEEEHHH
Confidence 34555 99999999999999999999999999999999976 79999999994
No 106
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.20 E-value=2e-11 Score=125.84 Aligned_cols=170 Identities=14% Similarity=0.114 Sum_probs=125.4
Q ss_pred cccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh-cccc-------ccccccc
Q psy1056 181 VIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD-FLEN-------SANMDLK 249 (590)
Q Consensus 181 im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~-~~~~-------~~~~~~~ 249 (590)
+|..++.+ ++++.++++.| .+++++++||+|++ +++++|++|.+|+. +... ......+
T Consensus 123 im~~~~~~v~~~~~~~~a~~~~---------~~~~~~~~~Vvd~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 191 (330)
T 2v8q_E 123 DSFKPLVCISPNASLFDAVSSL---------IRNKIHRLPVIDPE--SGNTLYILTHKRILKFLKLFITEFPKPEFMSKS 191 (330)
T ss_dssp SSCCCCCCBCTTSBHHHHHHHH---------HHHTCSCEEEECTT--TCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSB
T ss_pred cccCCceEeCCCCCHHHHHHHH---------HHCCCCeEEEEeCC--CCcEEEEEcHHHHHHHHHHHhhccCchhhhcCC
Confidence 56666655 88999999999 99999999999841 28999999999997 2211 1113466
Q ss_pred hhhc--cc-cCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCC------CcccC----
Q psy1056 250 IEKV--MT-NVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDS------SKDEN---- 316 (590)
Q Consensus 250 V~~i--m~-~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~------~~d~~---- 316 (590)
++++ |+ + +++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+++....... ..+..
T Consensus 192 v~~~~v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~ 269 (330)
T 2v8q_E 192 LEELQIGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRS 269 (330)
T ss_dssp HHHHTCSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCC
T ss_pred HHHhcccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccc
Confidence 7776 65 5 89999999999999999999999999999999999999999999987653210 00111
Q ss_pred ---CceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhH---HHHHHHHH
Q psy1056 317 ---NQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQ---IEMIKFIK 366 (590)
Q Consensus 317 ---~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~---l~~i~~i~ 366 (590)
.. ...+....+..+.+..|.+.+...+.|...+|...|+ .+.++.+.
T Consensus 270 ~~~~~---~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~ 322 (330)
T 2v8q_E 270 HYFEG---VLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALV 322 (330)
T ss_dssp SCCCS---CCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred cccCC---CeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 11 1233455677788999999999988776666655553 34444443
No 107
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.20 E-value=2.5e-11 Score=113.47 Aligned_cols=141 Identities=20% Similarity=0.248 Sum_probs=91.9
Q ss_pred hhhcccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccc-cCCCCCCCCccCCccc
Q psy1056 17 KVKKYKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFL-ENSANMDLKIEKDLSS 93 (590)
Q Consensus 17 ~vk~~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l-~~~~~~~~~~~~~~~~ 93 (590)
+|+++ |.+ +++++++++|+.+|+++|.+++++++||+|++ ++++|+||.+|+.-+ ..... .
T Consensus 5 ~v~di---m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~---~~~~Givt~~dl~~~~~~~~~----------~ 68 (180)
T 3sl7_A 5 TVGDF---MTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN---WTLVGVVSDYDLLALDSISGR----------S 68 (180)
T ss_dssp BHHHH---SEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT---CBEEEEEEHHHHTCC-----------------
T ss_pred eHHHh---cCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC---CeEEEEEEHHHHHhhhhhccc----------c
Confidence 44555 998 89999999999999999999999999999976 799999999953211 00000 0
Q ss_pred ccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhh
Q psy1056 94 PLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIK 173 (590)
Q Consensus 94 ~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk 173 (590)
..... +......... .+.... ..+....
T Consensus 69 ~~~~~------~~~~~~~~~~-----------------------~~~~~~-----------------------~~~~~~~ 96 (180)
T 3sl7_A 69 QNDTN------LFPDVDSTWK-----------------------TFNELQ-----------------------KLISKTY 96 (180)
T ss_dssp ------------------CCC-----------------------SHHHHH-----------------------HHHHTTT
T ss_pred CCccc------ccccccchhh-----------------------hhHHHH-----------------------HHHhccc
Confidence 00000 0000000000 000000 0001111
Q ss_pred hcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 174 KEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 174 ~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
. .+..++|..++.+ ++++.++++.| .+++++.+||+++ +|+++|+||.+|+.
T Consensus 97 ~-~~v~~~m~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVvd~---~g~~vGiit~~dil 151 (180)
T 3sl7_A 97 G-KVVGDLMTPSPLVVRDSTNLEDAARLL---------LETKFRRLPVVDA---DGKLIGILTRGNVV 151 (180)
T ss_dssp T-CBHHHHSEESCCCEETTSBHHHHHHHH---------TTSTTCEEEEECT---TCBEEEEEEHHHHH
T ss_pred c-ccHHHHhCCCceEeCCCCcHHHHHHHH---------HHcCCCEEEEECC---CCeEEEEEEHHHHH
Confidence 1 2333477766544 88999999999 9999999999997 69999999999997
No 108
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.20 E-value=2.9e-11 Score=108.22 Aligned_cols=115 Identities=16% Similarity=0.185 Sum_probs=86.3
Q ss_pred hhhcccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccc
Q psy1056 17 KVKKYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSP 94 (590)
Q Consensus 17 ~vk~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~ 94 (590)
+|+++ |+ ++++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+| ++..... .....
T Consensus 4 ~v~~i---M~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~--~~~~vGivt~~d--l~~~~~~-----~~~~~-- 69 (136)
T 3lfr_A 4 QVRDI---MVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGES--HDDVLGVLLAKD--LLPLILK-----ADGDS-- 69 (136)
T ss_dssp BHHHH---SEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS--TTCEEEEEEGGG--GGGGGGS-----SSGGG--
T ss_pred ChHhc---cccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC--CCcEEEEEEHHH--HHHHHHh-----ccCCC--
Confidence 35555 98 678999999999999999999999999999863 149999999994 4310000 00000
Q ss_pred cccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhh
Q psy1056 95 LTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKK 174 (590)
Q Consensus 95 l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~ 174 (590)
T Consensus 70 -------------------------------------------------------------------------------- 69 (136)
T 3lfr_A 70 -------------------------------------------------------------------------------- 69 (136)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcccccccccc--hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 175 EYPDMQVIGGNVVT--TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 175 ~~~~~~im~~~~~~--~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
.+..++|+.++++ ++++.++++.| .+++++.+||+|+ +|+++|+||.+|+.
T Consensus 70 -~~v~~~m~~~~~v~~~~~l~~~~~~m---------~~~~~~~~~Vvd~---~g~lvGiit~~Dil 122 (136)
T 3lfr_A 70 -DDVKKLLRPATFVPESKRLNVLLREF---------RANHNHMAIVIDE---YGGVAGLVTIEDVL 122 (136)
T ss_dssp -CCGGGTCBCCCEEETTCBHHHHHHHH---------HHHTCCEEEEECT---TSCEEEEEEHHHHH
T ss_pred -cCHHHHcCCCeEECCCCcHHHHHHHH---------HhcCCeEEEEEeC---CCCEEEEEEHHHHH
Confidence 1111245443333 78899999999 9999999999998 69999999999997
No 109
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.19 E-value=2.9e-11 Score=111.90 Aligned_cols=111 Identities=26% Similarity=0.337 Sum_probs=84.9
Q ss_pred cccc---CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccccc
Q psy1056 24 GFIR---DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKIT 100 (590)
Q Consensus 24 ~m~~---~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~~~ 100 (590)
+|.+ +++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+| ++.. +....
T Consensus 29 im~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~---~~~~Givt~~d--l~~~---------------~~~~~- 87 (165)
T 3fhm_A 29 LLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD---GVVLGIFTERD--LVKA---------------VAGQG- 87 (165)
T ss_dssp HHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT---SCEEEEEEHHH--HHHH---------------HHHHG-
T ss_pred HhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC---CeEEEEEEHHH--HHHH---------------HHhcC-
Confidence 3885 79999999999999999999999999999976 79999999994 3210 00000
Q ss_pred cCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcc
Q psy1056 101 LAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQ 180 (590)
Q Consensus 101 ~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~ 180 (590)
. .... .+..+
T Consensus 88 ----------------------~-----------------------------------------------~~~~-~~v~~ 97 (165)
T 3fhm_A 88 ----------------------A-----------------------------------------------ASLQ-QSVSV 97 (165)
T ss_dssp ----------------------G-----------------------------------------------GGGT-SBGGG
T ss_pred ----------------------C-----------------------------------------------cccc-CCHHH
Confidence 0 0000 12223
Q ss_pred cccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 181 VIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 181 im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
+|..++.+ ++++.++++.| .+++++.+||+|+ |+++|+||.+|+.
T Consensus 98 ~m~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVvd~----g~~~Giit~~dil 145 (165)
T 3fhm_A 98 AMTKNVVRCQHNSTTDQLMEIM---------TGGRFRHVPVEEN----GRLAGIISIGDVV 145 (165)
T ss_dssp TSBSSCCCBCTTCBHHHHHHHH---------HHHTCSEEEEEET----TEEEEEEEHHHHH
T ss_pred HhcCCCeEECCCCcHHHHHHHH---------HHcCCCEEEEEEC----CEEEEEEEHHHHH
Confidence 55554443 78999999999 9999999999997 8999999999998
No 110
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.19 E-value=2.6e-11 Score=111.28 Aligned_cols=52 Identities=15% Similarity=0.371 Sum_probs=45.5
Q ss_pred cccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccc
Q psy1056 20 KYKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73 (590)
Q Consensus 20 ~~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~D 73 (590)
.++++|++ +++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+|
T Consensus 39 ~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~--~~~lvGivt~~d 92 (156)
T 3oi8_A 39 EVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGED--KDEVLGILHAKD 92 (156)
T ss_dssp BGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS--TTCEEEEEEGGG
T ss_pred CHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC--CCcEEEEEEHHH
Confidence 34456997 78999999999999999999999999999975 139999999994
No 111
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.18 E-value=3e-11 Score=108.49 Aligned_cols=110 Identities=17% Similarity=0.226 Sum_probs=85.5
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccc--eeEEEEeccccccccCCCCCCCCccCCcccccccccc
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGE--KLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKIT 100 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~--~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~~~ 100 (590)
++|.++++++++++|+.+|+++|.+++++++||+|++ + +++|++|.+|+.-.+.. ..+..
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~~~Givt~~dl~~~~~~-------~~~~~-------- 70 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTARD---NPKRPVAVVSERDILRAVAQ-------RLDLD-------- 70 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETT---EEEEEEEEEEHHHHHHHHHT-------TCCTT--------
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC---CcceeEEEEEHHHHHHHHhc-------CCCCC--------
Confidence 3499999999999999999999999999999999987 7 99999999943211000 00000
Q ss_pred cCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcc
Q psy1056 101 LAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQ 180 (590)
Q Consensus 101 ~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~ 180 (590)
.+..+
T Consensus 71 ---------------------------------------------------------------------------~~v~~ 75 (141)
T 2rih_A 71 ---------------------------------------------------------------------------GPAMP 75 (141)
T ss_dssp ---------------------------------------------------------------------------SBSGG
T ss_pred ---------------------------------------------------------------------------CCHHH
Confidence 11112
Q ss_pred cccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 181 VIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 181 im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
+|..++.+ + ++.++++.| .+++++.+||+|+ +|+++|+||.+|+.
T Consensus 76 ~m~~~~~~v~~~-~l~~a~~~m---------~~~~~~~l~Vvd~---~g~~~Giit~~dll 123 (141)
T 2rih_A 76 IANSPITVLDTD-PVHVAAEKM---------RRHNIRHVVVVNK---NGELVGVLSIRDLC 123 (141)
T ss_dssp GCBCCCEEETTS-BHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHH
T ss_pred HcCCCCeEEcCC-CHHHHHHHH---------HHcCCeEEEEEcC---CCcEEEEEEHHHHH
Confidence 55444433 7 899999999 9999999999997 69999999999997
No 112
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.18 E-value=4.4e-11 Score=109.95 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=45.1
Q ss_pred cccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 20 KYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 20 ~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
.++++|.+ ++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 18 ~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~---~~~~Givt~~dl 68 (159)
T 3fv6_A 18 QVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRD---AVLVGVLSRKDL 68 (159)
T ss_dssp BGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTT---SCEEEEEEHHHH
T ss_pred CHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCC---CcEEEEEeHHHH
Confidence 44455987 6799999999999999999999999999976 799999999953
No 113
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.18 E-value=3e-11 Score=109.74 Aligned_cols=51 Identities=14% Similarity=0.177 Sum_probs=46.2
Q ss_pred ccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 21 YKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 21 ~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
++++|.+ +++++++++|+.+|+++|.+++++.+||+|++ |+++|++|.+|+
T Consensus 30 v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~---~~~~Givt~~dl 82 (149)
T 3k2v_A 30 VNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD---MNIIGIFTDGDL 82 (149)
T ss_dssp GGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT---CBEEEEEEHHHH
T ss_pred HHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC---CcEEEEecHHHH
Confidence 3344999 99999999999999999999999999999976 799999999953
No 114
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.17 E-value=1.9e-11 Score=110.68 Aligned_cols=127 Identities=19% Similarity=0.246 Sum_probs=88.9
Q ss_pred ccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccc
Q psy1056 21 YKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKK 98 (590)
Q Consensus 21 ~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~ 98 (590)
++++|.+ +++++++++|+.+|+++|.+++++++||+|++ ++++|++|.+| ++...... .. ...+.
T Consensus 7 v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~G~vt~~d--l~~~~~~~-----~~-~~~~~-- 73 (152)
T 4gqw_A 7 VGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED---WKLVGLVSDYD--LLALDSGD-----ST-WKTFN-- 73 (152)
T ss_dssp GGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT---CBEEEEEEHHH--HTTCC---------C-CHHHH--
T ss_pred hhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC---CeEEEEEEHHH--HHHhhccc-----Cc-ccchH--
Confidence 3445998 89999999999999999999999999999986 79999999994 43110000 00 00000
Q ss_pred cccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCC
Q psy1056 99 ITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPD 178 (590)
Q Consensus 99 ~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~ 178 (590)
.... +. ..... .+.
T Consensus 74 -----------------------~~~~-------------------~~-----------------------~~~~~-~~v 87 (152)
T 4gqw_A 74 -----------------------AVQK-------------------LL-----------------------SKTNG-KLV 87 (152)
T ss_dssp -----------------------HHHT-------------------C----------------------------C-CBH
T ss_pred -----------------------HHHH-------------------HH-----------------------HHhcc-ccH
Confidence 0000 00 00000 122
Q ss_pred cccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 179 MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 179 ~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
.++|..++.+ ++++.++++.| .+++++.+||+++ +|+++|+||.+|+.
T Consensus 88 ~~~m~~~~~~v~~~~~l~~a~~~~---------~~~~~~~l~Vvd~---~g~~~Giit~~dil 138 (152)
T 4gqw_A 88 GDLMTPAPLVVEEKTNLEDAAKIL---------LETKYRRLPVVDS---DGKLVGIITRGNVV 138 (152)
T ss_dssp HHHSEESCCCEESSSBHHHHHHHH---------HHSSCCEEEEECT---TSBEEEEEEHHHHH
T ss_pred HHhcCCCceEECCCCcHHHHHHHH---------HHCCCCEEEEECC---CCcEEEEEEHHHHH
Confidence 2366655444 88999999999 9999999999997 69999999999997
No 115
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.17 E-value=3.6e-11 Score=109.01 Aligned_cols=112 Identities=19% Similarity=0.248 Sum_probs=85.7
Q ss_pred ccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccc
Q psy1056 21 YKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKK 98 (590)
Q Consensus 21 ~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~ 98 (590)
++++|++ +++++++++|+.+|+++|.+++++++||+|++ .|+++|++|.+ |++.. +...
T Consensus 25 v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--~~~lvGivt~~--dl~~~---------------~~~~ 85 (148)
T 3lv9_A 25 IREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKN--KDDILGFVHIR--DLYNQ---------------KINE 85 (148)
T ss_dssp GGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSS--TTSEEEEEEHH--HHHHH---------------HHHH
T ss_pred HHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC--CCcEEEEEEHH--HHHHH---------------HhcC
Confidence 3456999 99999999999999999999999999999873 14999999999 44310 0000
Q ss_pred cccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCC
Q psy1056 99 ITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPD 178 (590)
Q Consensus 99 ~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~ 178 (590)
. ..+.
T Consensus 86 ~---------------------------------------------------------------------------~~~v 90 (148)
T 3lv9_A 86 N---------------------------------------------------------------------------KIEL 90 (148)
T ss_dssp S---------------------------------------------------------------------------CCCG
T ss_pred C---------------------------------------------------------------------------CccH
Confidence 0 0111
Q ss_pred cccccccccc--hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 179 MQVIGGNVVT--TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 179 ~~im~~~~~~--~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
.++|..++.+ ++++.++++.| .+++++.+||+|+ +|+++|+||..|+.
T Consensus 91 ~~~m~~~~~v~~~~~l~~~~~~m---------~~~~~~~l~Vvd~---~g~~~Giit~~dil 140 (148)
T 3lv9_A 91 EEILRDIIYISENLTIDKALERI---------RKEKLQLAIVVDE---YGGTSGVVTIEDIL 140 (148)
T ss_dssp GGTCBCCEEEETTSBHHHHHHHH---------HHHTCSEEEEECT---TSSEEEEEEHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHH---------HhcCCeEEEEEeC---CCCEEEEEEHHHHH
Confidence 2255222222 78899999999 9999999999998 79999999999997
No 116
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.17 E-value=2.6e-11 Score=125.18 Aligned_cols=165 Identities=9% Similarity=0.082 Sum_probs=121.3
Q ss_pred hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCC-e----EEEEEecchhhc-ccc----ccccccchhh---ccc
Q psy1056 189 TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGE-K----LLGIVTSRDVDF-LEN----SANMDLKIEK---VMT 255 (590)
Q Consensus 189 ~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~-~----lvGivt~~Dl~~-~~~----~~~~~~~V~~---im~ 255 (590)
++++.++++.| .+++++++||+++ ++ + ++|++|.+|+.. ... ......++++ +|.
T Consensus 125 ~~~~~~a~~~~---------~~~~~~~~~Vvd~---~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~ 192 (334)
T 2qrd_G 125 MHSLMDACLAM---------SKSRARRIPLIDV---DGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMTIGTW 192 (334)
T ss_dssp TSBHHHHHHHH---------HHSCCSEEEEEEE---ETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBC
T ss_pred CCcHHHHHHHH---------HHCCceEEEEEeC---CCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhCCccc
Confidence 78899999999 9999999999986 34 4 999999999972 211 1123578899 588
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCC------CcccCCc----eEEeEee
Q psy1056 256 NVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDS------SKDENNQ----LIVGAAI 325 (590)
Q Consensus 256 ~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~------~~d~~~~----l~v~a~i 325 (590)
+ +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+++....... ..+.... ..-...+
T Consensus 193 ~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v 270 (334)
T 2qrd_G 193 S--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANFDGVHTC 270 (334)
T ss_dssp S--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEE
T ss_pred C--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcccccCCCCEEE
Confidence 8 99999999999999999999999999999999999999999999986543210 0010000 0001234
Q ss_pred ccchhHHHHHHHHHHcCCcEEEEecCCCchhhH---HHHHHHHHH
Q psy1056 326 GTREADKNRLKLLSQAGVDVVILDSSQGNSIYQ---IEMIKFIKK 367 (590)
Q Consensus 326 ~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~---l~~i~~i~~ 367 (590)
....+..+.++.|.+.+...+.|...+|...|+ .+.++.+..
T Consensus 271 ~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 271 RATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp CTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHS
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHh
Confidence 556677888999999999877776555655443 344444443
No 117
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.17 E-value=1.1e-10 Score=112.29 Aligned_cols=107 Identities=15% Similarity=0.214 Sum_probs=86.8
Q ss_pred cCccccCCEEECCCCCHHHHHHHHHHc---CccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccc
Q psy1056 22 KHGFIRDPVCIAPSTTLGKVLQMKKQH---GFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKK 98 (590)
Q Consensus 22 ~~~m~~~~vtv~~~~ti~eA~~lM~~~---~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~ 98 (590)
.++|+.+++++++++|+.+|++.|.++ +++.+||+|++ ++++|++|.+ |++..+ ...++
T Consensus 57 ~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~---~~lvGivt~~--dll~~~----------~~~~v--- 118 (205)
T 3kxr_A 57 GRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA---DKYLGTVRRY--DIFKHE----------PHEPL--- 118 (205)
T ss_dssp GGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT---CBEEEEEEHH--HHTTSC----------TTSBG---
T ss_pred HhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC---CeEEEEEEHH--HHHhCC----------CcchH---
Confidence 357999999999999999999999997 89999999987 8999999999 554210 00011
Q ss_pred cccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCC
Q psy1056 99 ITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPD 178 (590)
Q Consensus 99 ~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~ 178 (590)
T Consensus 119 -------------------------------------------------------------------------------- 118 (205)
T 3kxr_A 119 -------------------------------------------------------------------------------- 118 (205)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 179 MQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 179 ~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
.++|..++.+ ++++.++++.| .++++..+||+|+ +|+++|+||..|+.
T Consensus 119 ~~im~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVVD~---~g~lvGiIT~~Dil 169 (205)
T 3kxr_A 119 ISLLSEDSRALTANTTLLDAAEAI---------EHSREIELPVIDD---AGELIGRVTLRAAT 169 (205)
T ss_dssp GGGCCSSCCCEETTSCHHHHHHHH---------HTSSCSEEEEECT---TSBEEEEEEHHHHH
T ss_pred HHHhcCCCeEECCCCCHHHHHHHH---------HhcCCCEEEEEcC---CCeEEEEEEHHHHH
Confidence 1245443333 77889999999 9999999999998 79999999999997
No 118
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.15 E-value=5.9e-11 Score=105.92 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=45.3
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
++|.++++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~Givt~~dl 60 (138)
T 2p9m_A 12 DVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDE---NKVIGIVTTTDI 60 (138)
T ss_dssp GTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTT---CBEEEEEEHHHH
T ss_pred HhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCC---CeEEEEEEHHHH
Confidence 4599999999999999999999999999999999976 799999999954
No 119
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.15 E-value=4.6e-11 Score=105.47 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=44.2
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccc
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~D 73 (590)
++|.++++++++++|+.+|+++|.+++++++||+|++ +++|++|.+|
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----~~~Givt~~d 55 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGE----RYLGMVHLSR 55 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETT----EEEEEEEHHH
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECC----EEEEEEEHHH
Confidence 3499999999999999999999999999999999985 9999999994
No 120
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.14 E-value=8e-11 Score=105.10 Aligned_cols=50 Identities=16% Similarity=0.300 Sum_probs=45.8
Q ss_pred cCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 22 KHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 22 ~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+++|.++++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~Givt~~dl 59 (138)
T 2yzi_A 10 KVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDD---GNVVGFFTKSDI 59 (138)
T ss_dssp GGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT---SCEEEEEEHHHH
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC---CcEEEEEeHHHH
Confidence 34599999999999999999999999999999999966 799999999954
No 121
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.14 E-value=2.7e-10 Score=111.18 Aligned_cols=123 Identities=17% Similarity=0.141 Sum_probs=89.1
Q ss_pred HHHHHHHHHcCCcEEEEecCCC-chhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQG-NSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G-~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
.+.+..+.++|+|++.++.+.. .+....+.++.+++. +.++++ ++.+.+.++++.++|+|+|-+... . ++
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~---g---~t 161 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMA-DCSTVNEGISCHQKGIEFIGTTLS---G---YT 161 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEE-ECSSHHHHHHHHHTTCSEEECTTT---T---SS
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEE-ecCCHHHHHHHHhCCCCEEEecCc---c---CC
Confidence 4556778899999999988754 334566777877765 666665 899999999999999999933211 1 11
Q ss_pred cccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 411 VIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 411 ~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
+.+. ....+..+.+.... ++|+|++|||.|+.|+.+++++|||+|++|+.|..
T Consensus 162 ~~~~~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 162 GPITPVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp SSCCCSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCcCCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 1111 11112233333333 79999999999999999999999999999999964
No 122
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.14 E-value=1.9e-11 Score=108.38 Aligned_cols=50 Identities=14% Similarity=0.197 Sum_probs=43.1
Q ss_pred cCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccc
Q psy1056 22 KHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73 (590)
Q Consensus 22 ~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~D 73 (590)
+++|++ +++++++++|+.+|+++|.+++++++||+|++ .|+++|++|.+|
T Consensus 9 ~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~--~~~~~Givt~~d 60 (130)
T 3i8n_A 9 TQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQ--KDNIIGFVHRLE 60 (130)
T ss_dssp TTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSS--TTCEEEECCHHH
T ss_pred hhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC--CCcEEEEEEHHH
Confidence 345994 46699999999999999999999999999863 159999999994
No 123
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.14 E-value=6e-11 Score=105.24 Aligned_cols=110 Identities=17% Similarity=0.296 Sum_probs=84.7
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccccccC
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLA 102 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (590)
++|.++++++++++|+.+|+++|.+++++.+||+| + |+++|++|.+|+.-.+... ....
T Consensus 8 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~---~~~~Givt~~dl~~~~~~~-------~~~~---------- 66 (133)
T 2ef7_A 8 EYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G---NKPVGIITERDIVKAIGKG-------KSLE---------- 66 (133)
T ss_dssp GTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T---TEEEEEEEHHHHHHHHHTT-------CCTT----------
T ss_pred HhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C---CEEEEEEcHHHHHHHHhcC-------CCcc----------
Confidence 44999999999999999999999999999999999 5 6999999999532111000 0000
Q ss_pred CceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccc
Q psy1056 103 APLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVI 182 (590)
Q Consensus 103 ~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im 182 (590)
.+..++|
T Consensus 67 -------------------------------------------------------------------------~~v~~~~ 73 (133)
T 2ef7_A 67 -------------------------------------------------------------------------TKAEEFM 73 (133)
T ss_dssp -------------------------------------------------------------------------CBGGGTS
T ss_pred -------------------------------------------------------------------------cCHHHHc
Confidence 0111244
Q ss_pred cccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 183 GGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 183 ~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
..++.+ ++++.++++.| .+++++.+||+++ +|+++|+||.+|+.
T Consensus 74 ~~~~~~v~~~~~l~~~~~~~---------~~~~~~~l~Vvd~---~g~~~Giit~~dll 120 (133)
T 2ef7_A 74 TASLITIREDSPITGALALM---------RQFNIRHLPVVDD---KGNLKGIISIRDIT 120 (133)
T ss_dssp EECCCCEETTSBHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHH
T ss_pred CCCCEEECCCCCHHHHHHHH---------HHcCCCEEEEECC---CCeEEEEEEHHHHH
Confidence 443333 78899999999 9999999999997 69999999999997
No 124
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=2.8e-11 Score=107.44 Aligned_cols=53 Identities=8% Similarity=0.154 Sum_probs=44.8
Q ss_pred hhhcccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+|+++ |+ ++++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+|+
T Consensus 3 ~v~~i---M~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~--~~~lvGivt~~dl 57 (130)
T 3hf7_A 3 SVNDI---MVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDS--LDDAISMLRVREA 57 (130)
T ss_dssp BHHHH---SEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSS--GGGEEEEEEHHHH
T ss_pred CHHHh---CccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCC--CCcEEEEEEHHHH
Confidence 34555 87 478999999999999999999999999999752 1699999999943
No 125
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.13 E-value=7.7e-11 Score=106.88 Aligned_cols=55 Identities=20% Similarity=0.333 Sum_probs=48.2
Q ss_pred HHHhhhcccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 14 EVLKVKKYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 14 ~~~~vk~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
.-.+|+++ |. .+++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 13 ~~~~v~~i---m~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~---~~~~Givt~~dl 69 (150)
T 3lqn_A 13 QQIFVKDL---MISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM---YKLHGLISTAMI 69 (150)
T ss_dssp HHCBHHHH---SEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT---CBEEEEEEHHHH
T ss_pred hcCChhhc---ccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC---CCEEEEEEHHHH
Confidence 33466666 99 569999999999999999999999999999976 799999999953
No 126
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.12 E-value=9.8e-11 Score=107.01 Aligned_cols=49 Identities=12% Similarity=0.263 Sum_probs=44.5
Q ss_pred cCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccc
Q psy1056 22 KHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73 (590)
Q Consensus 22 ~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~D 73 (590)
+++|+ ++++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|
T Consensus 18 ~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~---~~~~Giit~~d 68 (156)
T 3ctu_A 18 ETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE---KQFVGTIGLRD 68 (156)
T ss_dssp GGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC----CBEEEEEEHHH
T ss_pred HHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC---CEEEEEEcHHH
Confidence 34599 789999999999999999999999999999976 79999999994
No 127
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.12 E-value=6.4e-11 Score=110.51 Aligned_cols=112 Identities=21% Similarity=0.255 Sum_probs=86.0
Q ss_pred cccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCccccccc
Q psy1056 20 KYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTK 97 (590)
Q Consensus 20 ~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~ 97 (590)
.++++|+ ++++++++++|+.+|+++|.+++++++||+|++ .++++|++|.+ |++... ..
T Consensus 43 ~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~--~~~lvGivt~~--dl~~~~---------------~~ 103 (172)
T 3lhh_A 43 TISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNN--VDDMVGIISAK--QLLSES---------------IA 103 (172)
T ss_dssp CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSS--TTSEEEEEEHH--HHHHHH---------------HT
T ss_pred CHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC--CCeEEEEEEHH--HHHHHH---------------hh
Confidence 3445699 788999999999999999999999999999862 14999999999 443100 00
Q ss_pred ccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCC
Q psy1056 98 KITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYP 177 (590)
Q Consensus 98 ~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~ 177 (590)
+ .+ .+
T Consensus 104 ----------------------------~------~~-----------------------------------------~~ 108 (172)
T 3lhh_A 104 ----------------------------G------ER-----------------------------------------LE 108 (172)
T ss_dssp ----------------------------T------CC-----------------------------------------CC
T ss_pred ----------------------------c------Cc-----------------------------------------cc
Confidence 0 00 11
Q ss_pred Ccccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 178 DMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 178 ~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
..++| .++.+ ++++.++++.| .+++++.+||+|+ +|+++||||..|+.
T Consensus 109 v~~im-~~~~~v~~~~~l~~a~~~m---------~~~~~~~~pVvd~---~g~lvGiit~~Dil 159 (172)
T 3lhh_A 109 LVDLV-KNCNFVPNSLSGMELLEHF---------RTTGSQMVFVVDE---YGDLKGLVTLQDMM 159 (172)
T ss_dssp GGGGC-BCCEEEETTCCHHHHHHHH---------HHHTCSEEEEECT---TSCEEEEEEHHHHH
T ss_pred HHHHh-cCCeEeCCCCCHHHHHHHH---------HHcCCeEEEEEeC---CCCEEEEeeHHHHH
Confidence 11255 33333 78899999999 9999999999998 79999999999997
No 128
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.12 E-value=3.7e-10 Score=139.40 Aligned_cols=95 Identities=8% Similarity=-0.082 Sum_probs=63.2
Q ss_pred ccCcHHHHHH----HHCCCCEEEE-cccccccCCCcccc-ccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHH---
Q psy1056 379 VLFGYQPRAT----LLNFIYQIEM-IKFIKKEYPDMQVI-GRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKAL--- 449 (590)
Q Consensus 379 v~s~~~a~~l----~~~Gvd~i~v-~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kal--- 449 (590)
+.+..+|+++ .++|+|+|.+ ... +....|..|+ ......+..+.+..+..++|||++|||.++.|+++||
T Consensus 699 v~~~~~a~~~v~~l~~aG~D~iV~~q~~-G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ 777 (2060)
T 2uva_G 699 KPGSVDAIQQVINIAKANPTFPIILQWT-GGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGS 777 (2060)
T ss_dssp CCCSHHHHHHHHHHHHHCTTSCEEEEEC-CTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeeeE-cccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCc
Confidence 4444555544 8899998841 111 1111111111 0112223344455555679999999999999999999
Q ss_pred --------HcCCCEEEECccccCCCCCCCceEe
Q psy1056 450 --------ALGASTAMMGSLLAGTSEAPGEYFF 474 (590)
Q Consensus 450 --------alGA~~v~~g~~l~~~~es~~~~~~ 474 (590)
+||||+|+||++|+.|.||+.+-.+
T Consensus 778 ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~ 810 (2060)
T 2uva_G 778 WSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQA 810 (2060)
T ss_dssp GGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHH
T ss_pred chhhcCCCCCCCCEEEEchhhhcCcCCCCCHHH
Confidence 9999999999999999999977433
No 129
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.11 E-value=6.6e-11 Score=108.92 Aligned_cols=50 Identities=26% Similarity=0.459 Sum_probs=45.7
Q ss_pred cCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 22 KHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 22 ~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+++|.++++++++++|+.+|+++|.+++++++||+|++ |+++|+||.+|+
T Consensus 8 ~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~---~~lvGivt~~dl 57 (160)
T 2o16_A 8 EDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN---KKLLGIVSQRDL 57 (160)
T ss_dssp GGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT---CBEEEEEEHHHH
T ss_pred HHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC---CcEEEEEeHHHH
Confidence 34499999999999999999999999999999999976 799999999953
No 130
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.10 E-value=5.3e-11 Score=105.60 Aligned_cols=53 Identities=21% Similarity=0.471 Sum_probs=47.2
Q ss_pred HhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 16 LKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 16 ~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
.+|+++ |.++++++++++|+.+|+++|.+++++++||+|++ ++++|++|.+|+
T Consensus 8 ~~v~~i---m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~Givt~~dl 60 (133)
T 1y5h_A 8 TTARDI---MNAGVTCVGEHETLTAAAQYMREHDIGALPICGDD---DRLHGMLTDRDI 60 (133)
T ss_dssp CCHHHH---SEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGG---GBEEEEEEHHHH
T ss_pred cCHHHH---hcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCC---CeEEEEEeHHHH
Confidence 345555 99999999999999999999999999999999876 799999999953
No 131
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.09 E-value=4.9e-11 Score=108.91 Aligned_cols=112 Identities=17% Similarity=0.271 Sum_probs=85.8
Q ss_pred hhhcccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeec-cCCcccceeEEEEeccccccccCCCCCCCCccCCccc
Q psy1056 17 KVKKYKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVT-ENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSS 93 (590)
Q Consensus 17 ~vk~~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVv-d~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~ 93 (590)
+|+++ |++ +++++++++|+.+|+++|.+++++++||+ |++ .|+++|++|.+ |++..
T Consensus 21 ~v~~i---M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~--~~~lvGivt~~--dl~~~-------------- 79 (153)
T 3oco_A 21 VASDV---MVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADND--KDKIIGYAYNY--DIVRQ-------------- 79 (153)
T ss_dssp BHHHH---SEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTE--EEEEEEEEEHH--HHHHH--------------
T ss_pred EeeeE---ecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCC--CCcEEEEEEHH--HHHhH--------------
Confidence 45555 996 89999999999999999999999999999 541 16999999999 44310
Q ss_pred ccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhh
Q psy1056 94 PLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIK 173 (590)
Q Consensus 94 ~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk 173 (590)
+... .
T Consensus 80 -~~~~---------------------------~----------------------------------------------- 84 (153)
T 3oco_A 80 -ARID---------------------------D----------------------------------------------- 84 (153)
T ss_dssp -HHHH---------------------------T-----------------------------------------------
T ss_pred -HhcC---------------------------C-----------------------------------------------
Confidence 0000 0
Q ss_pred hcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 174 KEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 174 ~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
. .+..++| .++.+ ++++.++++.| .++++..+||+++ +|+++|+||..|+.
T Consensus 85 ~-~~v~~~m-~~~~~v~~~~~l~~~~~~m---------~~~~~~~lpVvd~---~g~~vGivt~~dil 138 (153)
T 3oco_A 85 K-AKISTIM-RDIVSVPENMKVPDVMEEM---------SAHRVPMAIVIDE---YGGTSGIITDKDVY 138 (153)
T ss_dssp T-SBGGGTC-BCCEEEETTSBHHHHHHHH---------HHTTCSCEEEECT---TSCEEEEECHHHHH
T ss_pred C-CcHHHHh-CCCeEECCCCCHHHHHHHH---------HHcCCcEEEEEeC---CCCEEEEeeHHHHH
Confidence 0 1112355 33333 78899999999 9999999999998 79999999999997
No 132
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.09 E-value=1.4e-10 Score=103.18 Aligned_cols=51 Identities=29% Similarity=0.427 Sum_probs=45.8
Q ss_pred hhhcccCccc---cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFI---RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~---~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+|+++ |. ++++++++++|+.+|+++|.+++++++||+| + |+++|++|.+|+
T Consensus 7 ~v~~i---m~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~---~~~~Givt~~dl 60 (135)
T 2rc3_A 7 TVKHL---LQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D---EKLVGILTERDF 60 (135)
T ss_dssp BHHHH---HHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T---TEEEEEEEHHHH
T ss_pred eHHHH---HhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C---CEEEEEEehHHH
Confidence 45555 98 8999999999999999999999999999999 4 699999999953
No 133
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.09 E-value=1.7e-10 Score=108.78 Aligned_cols=113 Identities=15% Similarity=0.219 Sum_probs=86.8
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccccccccC
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTKKITLA 102 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (590)
++|.++++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+| ++..+.. . . ...
T Consensus 13 ~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~---g~~vGivt~~d--l~~~~~~-----~-------~-~~~-- 72 (184)
T 1pvm_A 13 KIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN---GNDVGLLSERS--IIKRFIP-----R-------N-KKP-- 72 (184)
T ss_dssp GTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT---SCEEEEEEHHH--HHHHTGG-----G-------C-CCG--
T ss_pred HhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC---CcEEEEEeHHH--HHHHHhh-----c-------c-cCc--
Confidence 4499999999999999999999999999999999876 79999999994 4311000 0 0 000
Q ss_pred CceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccc
Q psy1056 103 APLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVI 182 (590)
Q Consensus 103 ~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im 182 (590)
.. .+..++|
T Consensus 73 ----------------------------------------------------------------------~~-~~v~~im 81 (184)
T 1pvm_A 73 ----------------------------------------------------------------------DE-VPIRLVM 81 (184)
T ss_dssp ----------------------------------------------------------------------GG-SBGGGTS
T ss_pred ----------------------------------------------------------------------cc-CCHHHHh
Confidence 00 1122355
Q ss_pred cccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 183 GGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 183 ~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
..++.+ ++++.++++.| .+++++.+||+|+ +|+++|+||.+|+.
T Consensus 82 ~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVvd~---~g~~~Givt~~dll 128 (184)
T 1pvm_A 82 RKPIPKVKSDYDVKDVAAYL---------SENGLERCAVVDD---PGRVVGIVTLTDLS 128 (184)
T ss_dssp BSSCCEEETTCBHHHHHHHH---------HHHTCSEEEEECT---TCCEEEEEEHHHHT
T ss_pred CCCCcEECCCCCHHHHHHHH---------HHcCCcEEEEEcC---CCeEEEEEEHHHHH
Confidence 544433 78899999999 9999999999998 69999999999997
No 134
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.09 E-value=8.6e-11 Score=102.85 Aligned_cols=51 Identities=25% Similarity=0.272 Sum_probs=45.9
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+|+++ |.++++++++++|+.+|+++|.+++++.+||+| + |+++|++|.+|+
T Consensus 2 ~v~~~---m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~---~~~~G~it~~dl 52 (125)
T 1pbj_A 2 RVEDV---MVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-E---GVRVGIVTTWDV 52 (125)
T ss_dssp CHHHH---CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T---TEEEEEEEHHHH
T ss_pred CHHHh---cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C---CeeEEEEeHHHH
Confidence 35555 999999999999999999999999999999999 5 699999999943
No 135
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.08 E-value=7.5e-11 Score=105.83 Aligned_cols=55 Identities=16% Similarity=0.171 Sum_probs=48.4
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
++++..-+|.++++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 9 ~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~---~~~~Givt~~dl 63 (144)
T 2nyc_A 9 PIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN---GYLINVYEAYDV 63 (144)
T ss_dssp BGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT---CBEEEEEEHHHH
T ss_pred chhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCC---CcEEEEEcHHHH
Confidence 4555433699999999999999999999999999999999976 799999999953
No 136
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.08 E-value=1.1e-10 Score=106.77 Aligned_cols=51 Identities=20% Similarity=0.356 Sum_probs=44.0
Q ss_pred hhhcccCccc------cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFI------RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~------~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+|+++ |. ++++++++++|+.+|+++|.+++++.+||+|+ |+++|++|.+|+
T Consensus 8 ~v~di---m~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~----~~~~Givt~~dl 64 (157)
T 4fry_A 8 TVAQI---LKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDG----DDIAGIVTERDY 64 (157)
T ss_dssp BHHHH---HHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESS----SSEEEEEEHHHH
T ss_pred HHHHH---HhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeC----CEEEEEEEHHHH
Confidence 45555 88 44599999999999999999999999999764 599999999953
No 137
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.08 E-value=7.6e-10 Score=108.29 Aligned_cols=124 Identities=16% Similarity=0.103 Sum_probs=88.8
Q ss_pred HHHHHHHHHcCCcEEEEecCCCc-hhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGN-SIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~-~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
.+.+..+.++|+|++.++.+... +....+.++.+++. +.++++ ++.+.+.++++.++|+|+|-+.+..... +..
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~--~~~ 165 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMA-DCSSVDDGLACQRLGADIIGTTMSGYTT--PDT 165 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTSSS--SSC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccCCC--CCC
Confidence 45567788999999999887542 34566777777765 666655 8999999999999999999332211000 000
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 411 VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 411 ~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
..+.....+.++. .. ++|+|++|||.|+.|+.+++++|||+|++|+.|..
T Consensus 166 ~~~~~~~~i~~l~---~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 166 PEEPDLPLVKALH---DA-GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp CSSCCHHHHHHHH---HT-TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCCCHHHHHHHH---hc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 0111333333333 33 79999999999999999999999999999999964
No 138
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.08 E-value=8.4e-10 Score=115.82 Aligned_cols=174 Identities=18% Similarity=0.180 Sum_probs=113.2
Q ss_pred EEeEeeccc-------hhHHHHHHHHHHcCCcEEEEecCCCc---------hhhHHHHHHHHHHhC--------------
Q psy1056 320 IVGAAIGTR-------EADKNRLKLLSQAGVDVVILDSSQGN---------SIYQIEMIKFIKKEY-------------- 369 (590)
Q Consensus 320 ~v~a~i~~~-------~~~~e~~~~li~~gad~i~V~~~~G~---------~~~~l~~i~~i~~~~-------------- 369 (590)
+++.+++.. +++.+.++.+.+. +|++.||.+-.+ .+.+.+.++.+++..
T Consensus 183 ~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~ 261 (415)
T 3i65_A 183 IVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFL 261 (415)
T ss_dssp EEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHH
T ss_pred eEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhccccccccccc
Confidence 456666543 2344445555444 999999875322 223345666666531
Q ss_pred -----CCce-EEeccccC------cHHHHHHHHCCCCEEEEcccccccC---------CCcccccc---chhHHHHHHHH
Q psy1056 370 -----PDMQ-VIGGNVLF------GYQPRATLLNFIYQIEMIKFIKKEY---------PDMQVIGR---NGTAVYRVAEY 425 (590)
Q Consensus 370 -----~~vp-vi~g~v~s------~~~a~~l~~~Gvd~i~v~~~~~~~~---------~~~~~~g~---~~~~l~~~~~~ 425 (590)
.++| |.+|=-.. .+-|+.+.++|+|+|.+++.+.++. .|+.|... +...+.++++.
T Consensus 262 ~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~ 341 (415)
T 3i65_A 262 WFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY 341 (415)
T ss_dssp CCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHH
T ss_pred ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHH
Confidence 2578 78774442 3457888999999997765443220 01112111 12233444433
Q ss_pred HhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchh
Q psy1056 426 ASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRY 505 (590)
Q Consensus 426 ~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~ 505 (590)
+. .++|||+.|||+|+.|+.+++.+|||+|++|+.+. |.|
T Consensus 342 v~-~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l-------------------~~G-------------------- 381 (415)
T 3i65_A 342 TN-KQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLV-------------------FNG-------------------- 381 (415)
T ss_dssp TT-TCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHH-------------------HHG--------------------
T ss_pred hC-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHH-------------------hcC--------------------
Confidence 22 15999999999999999999999999999999872 111
Q ss_pred hhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 506 FHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 506 ~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
-.++..+..+|+..|...|+.+|+|++..
T Consensus 382 ------------------------P~~~~~i~~~L~~~l~~~G~~si~e~~G~ 410 (415)
T 3i65_A 382 ------------------------MKSAVQIKRELNHLLYQRGYYNLKEAIGR 410 (415)
T ss_dssp ------------------------GGHHHHHHHHHHHHHHHTTCSSSTTTTTT
T ss_pred ------------------------HHHHHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 02477888999999999999999999865
No 139
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.07 E-value=2.2e-10 Score=104.86 Aligned_cols=52 Identities=15% Similarity=0.258 Sum_probs=46.7
Q ss_pred HhhhcccCccccCCEEECCCCCHHHHHHHHHHcCccc-eeeccCCcccceeEEEEecccc
Q psy1056 16 LKVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCG-FPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 16 ~~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~-lpVvd~~~~~~~lvGivT~~Di 74 (590)
.+|+++ |.++++++++++|+.+|+++|.++++++ +||+|++ +++|++|.+|+
T Consensus 16 ~~v~~i---m~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~----~~vGivt~~dl 68 (157)
T 1o50_A 16 KDVCKL---ISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN----KLVGMIPVMHL 68 (157)
T ss_dssp HHHTTS---SCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT----EEEEEEEHHHH
T ss_pred ccHhhc---ccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC----EEEEEEEHHHH
Confidence 345555 9999999999999999999999999999 9999985 99999999953
No 140
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.07 E-value=1e-10 Score=115.84 Aligned_cols=51 Identities=27% Similarity=0.432 Sum_probs=45.6
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
++|+++++|+++++|+.+|+++|.+++++++||||++ ..++++|+||.+|+
T Consensus 17 diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~-~~~~LvGiIt~~dl 67 (250)
T 2d4z_A 17 DIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTP-DTNTLLGSIDRTEV 67 (250)
T ss_dssp SSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCT-TTCBEEEEEEHHHH
T ss_pred HhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecC-CCCeEEEEEEHHHH
Confidence 4499999999999999999999999999999999963 11589999999975
No 141
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.06 E-value=9.3e-09 Score=107.87 Aligned_cols=131 Identities=19% Similarity=0.168 Sum_probs=92.1
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc-c-c---ccc
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-F-I---KKE 405 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-~-~---~~~ 405 (590)
..+.++.+.+.|++++.++..... .+.++.+++. +++++. .+.+.+.++.+.++|+|+|.+.. . . +..
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~~----~~~i~~~~~~--g~~v~~-~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~ 183 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVPD----REVIARLRRA--GTLTLV-TATTPEEARAVEAAGADAVIAQGVEAGGHQGTH 183 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCCC----HHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSEEEEECTTCSEECCCS
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCc----HHHHHHHHHC--CCeEEE-ECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCc
Confidence 456778888999999988653321 3456666664 677665 68899999999999999997621 1 0 000
Q ss_pred CCCc--ccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCc
Q psy1056 406 YPDM--QVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471 (590)
Q Consensus 406 ~~~~--~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~ 471 (590)
.... .+++. +...+.++ .+..++|||++|||+++.++.+++++|||+|++|+.|..+.|++..
T Consensus 184 ~~~~~~~~~~~~~~~~l~~i---~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~~~ 249 (369)
T 3bw2_A 184 RDSSEDDGAGIGLLSLLAQV---REAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESGAP 249 (369)
T ss_dssp SCCGGGTTCCCCHHHHHHHH---HHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCCCC
T ss_pred ccccccccccccHHHHHHHH---HHhcCceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccCcc
Confidence 0000 01112 23333333 3335799999999999999999999999999999999999998765
No 142
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.04 E-value=2.1e-09 Score=111.01 Aligned_cols=128 Identities=23% Similarity=0.226 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
..+.++.+.+.|++++.++.. .+ .+.++++++. +++++. .+.+.++++.+.++|+|+|.+. +....|..
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g--~p---~~~~~~l~~~--gi~vi~-~v~t~~~a~~~~~~GaD~i~v~---g~~~GG~~ 153 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGN--DP---GEHIAEFRRH--GVKVIH-KCTAVRHALKAERLGVDAVSID---GFECAGHP 153 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEES--CC---HHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSEEEEE---CTTCSBCC
T ss_pred HHHHHHHHHhcCCCEEEEcCC--Cc---HHHHHHHHHc--CCCEEe-eCCCHHHHHHHHHcCCCEEEEE---CCCCCcCC
Confidence 356778888999999988653 23 3556667665 688874 6889999999999999999652 11100111
Q ss_pred cccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCc
Q psy1056 411 VIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471 (590)
Q Consensus 411 ~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~ 471 (590)
|. ....+..+.+..+..++|||++|||+++.++.+++++|||+|++|+.|..+.||+++
T Consensus 154 --G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e~~~~ 213 (328)
T 2gjl_A 154 --GEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIH 213 (328)
T ss_dssp --CSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSSSCSC
T ss_pred --CCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCcccccc
Confidence 11 112333344444445799999999999999999999999999999999999998776
No 143
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.04 E-value=2e-10 Score=104.85 Aligned_cols=50 Identities=22% Similarity=0.383 Sum_probs=45.4
Q ss_pred cCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 22 KHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 22 ~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+++|.+ +++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 14 ~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~---~~~~Givt~~dl 65 (157)
T 2emq_A 14 KPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS---YKLHGLISMTMM 65 (157)
T ss_dssp TTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT---CCEEEEEEHHHH
T ss_pred HhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC---CCEEEEeeHHHH
Confidence 345987 89999999999999999999999999999976 799999999953
No 144
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.03 E-value=1e-09 Score=116.75 Aligned_cols=125 Identities=17% Similarity=0.108 Sum_probs=85.8
Q ss_pred Cce-EEeccccC--cHH----HHHHHHCCCCEEEEcccccccCC---------CccccccchhHHHHHHHHHhcC--CCc
Q psy1056 371 DMQ-VIGGNVLF--GYQ----PRATLLNFIYQIEMIKFIKKEYP---------DMQVIGRNGTAVYRVAEYASRR--GVP 432 (590)
Q Consensus 371 ~vp-vi~g~v~s--~~~----a~~l~~~Gvd~i~v~~~~~~~~~---------~~~~~g~~~~~l~~~~~~~~~~--~v~ 432 (590)
++| |++|--.. .++ |+.+.++|+|+|.++..+....+ |+.|....+.++..+++..+.. ++|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 578 88774432 224 88899999999988654432100 1111111111222333333333 699
Q ss_pred EEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccc
Q psy1056 433 VIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDK 512 (590)
Q Consensus 433 iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~ 512 (590)
||+.|||+|+.|+.+++++|||+|++|+.|. |.|
T Consensus 376 VIg~GGI~s~~DA~e~l~aGAd~Vqigrall-------------------~~g--------------------------- 409 (443)
T 1tv5_A 376 IIASGGIFSGLDALEKIEAGASVCQLYSCLV-------------------FNG--------------------------- 409 (443)
T ss_dssp EEEESSCCSHHHHHHHHHTTEEEEEESHHHH-------------------HHG---------------------------
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEcHHHH-------------------hcC---------------------------
Confidence 9999999999999999999999999999872 001
Q ss_pred eeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 513 LKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 513 ~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
-.++..+..+|+..|...|+.+++|++..
T Consensus 410 -----------------P~l~~~i~~~l~~~l~~~G~~si~e~~G~ 438 (443)
T 1tv5_A 410 -----------------MKSAVQIKRELNHLLYQRGYYNLKEAIGR 438 (443)
T ss_dssp -----------------GGHHHHHHHHHHHHHHHHTCSSSGGGTTT
T ss_pred -----------------hHHHHHHHHHHHHHHHHhCCCCHHHHhhh
Confidence 02477888899999999999999999865
No 145
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.03 E-value=1.3e-09 Score=129.02 Aligned_cols=174 Identities=17% Similarity=0.144 Sum_probs=119.2
Q ss_pred EEeEee--cc-chhHHHHHHHHHHcCCcEEEEecC--C------------CchhhHHHHHHHHHHhCCCceEEeccccCc
Q psy1056 320 IVGAAI--GT-READKNRLKLLSQAGVDVVILDSS--Q------------GNSIYQIEMIKFIKKEYPDMQVIGGNVLFG 382 (590)
Q Consensus 320 ~v~a~i--~~-~~~~~e~~~~li~~gad~i~V~~~--~------------G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~ 382 (590)
.+.+++ +. ..+..+.++.+.++|+|++.++.+ + .+...+.+.++++++.. ++|+++|-..+.
T Consensus 636 ~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~ 714 (1025)
T 1gte_A 636 IVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTPNV 714 (1025)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCS
T ss_pred CeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCCCh
Confidence 455555 32 345556777777899999999853 1 12244678899999887 799999876643
Q ss_pred ----HHHHHHHHCCCCEEEEcccc-------------------cccC-CCccccccchhHHHHHHHHHhcC-CCcEEecC
Q psy1056 383 ----YQPRATLLNFIYQIEMIKFI-------------------KKEY-PDMQVIGRNGTAVYRVAEYASRR-GVPVIADG 437 (590)
Q Consensus 383 ----~~a~~l~~~Gvd~i~v~~~~-------------------~~~~-~~~~~~g~~~~~l~~~~~~~~~~-~v~iia~G 437 (590)
+.|+.+.++|+|+|.+++.. .+.. +++.+-...+.++..+.+..+.. ++|||++|
T Consensus 715 ~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~G 794 (1025)
T 1gte_A 715 TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATG 794 (1025)
T ss_dssp SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEec
Confidence 44889999999999883211 0000 00111000011122233333334 69999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQ 517 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~e 517 (590)
||+|+.|+.++|++|||+|++|+.+.. ++
T Consensus 795 GI~s~~da~~~l~~Ga~~v~vg~~~l~-------------------~~-------------------------------- 823 (1025)
T 1gte_A 795 GIDSAESGLQFLHSGASVLQVCSAVQN-------------------QD-------------------------------- 823 (1025)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESHHHHT-------------------SC--------------------------------
T ss_pred CcCCHHHHHHHHHcCCCEEEEeecccc-------------------CC--------------------------------
Confidence 999999999999999999999998831 01
Q ss_pred cceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHH
Q psy1056 518 GVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRA 557 (590)
Q Consensus 518 g~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~ 557 (590)
-.+++.+..+|+..|...|+.+++||+.
T Consensus 824 ------------~~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 824 ------------FTVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp ------------TTHHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred ------------ccHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 0347788899999999999999999876
No 146
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.03 E-value=4.7e-10 Score=104.90 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=45.3
Q ss_pred hcccCccc--cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEeccc
Q psy1056 19 KKYKHGFI--RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRD 73 (590)
Q Consensus 19 k~~~~~m~--~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~D 73 (590)
.+++++|+ ++++++++++|+.+|+++|.+++++++||+|++ .++++|+||.+|
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--~~~lvGivt~~D 90 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGS--LDEVVGIGRAKD 90 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSS--TTSEEEEEEHHH
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCC--CCCEEEEEEHHH
Confidence 34456797 478899999999999999999999999999853 159999999994
No 147
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.03 E-value=2.7e-10 Score=104.45 Aligned_cols=52 Identities=17% Similarity=0.399 Sum_probs=46.8
Q ss_pred hhhcccCcccc--CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFIR--DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~~--~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+|+++ |.+ +++++++++|+.+|+++|.+++++++||+|++ |+++|++|.+|+
T Consensus 15 ~v~~i---m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~---~~lvGivt~~dl 68 (159)
T 1yav_A 15 TVGQF---MIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS---YRLHGLIGTNMI 68 (159)
T ss_dssp BHHHH---SEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT---CBEEEEEEHHHH
T ss_pred hHHHH---hCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC---CCEEEEeEHHHH
Confidence 45554 988 89999999999999999999999999999976 799999999953
No 148
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.01 E-value=2.3e-10 Score=105.11 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=46.7
Q ss_pred hhhcccCccccCCEEECCCCCHHHHHHHHHHcCccceeeccC--CcccceeEEEEecccc
Q psy1056 17 KVKKYKHGFIRDPVCIAPSTTLGKVLQMKKQHGFCGFPVTEN--GKLGEKLLGIVTSRDV 74 (590)
Q Consensus 17 ~vk~~~~~m~~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~--~~~~~~lvGivT~~Di 74 (590)
+|+++ |.++++++++++|+.+|+++|.+++++++||+|+ + |+++|++|.+|+
T Consensus 14 ~v~di---m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~---~~~~Givt~~dl 67 (164)
T 2pfi_A 14 RVEHF---MNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTES---QILVGIVQRAQL 67 (164)
T ss_dssp BHHHH---CBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTT---CBEEEEEEHHHH
T ss_pred CHHHH---cCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCC---CEEEEEEEHHHH
Confidence 45555 9999999999999999999999999999999996 5 799999999953
No 149
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.00 E-value=9.8e-10 Score=113.75 Aligned_cols=166 Identities=16% Similarity=0.053 Sum_probs=110.2
Q ss_pred hhHHHHHHHHH---HcCCcEEEEecC--C--C------chhhHHHHHHHHHHhCCCceEEecccc--CcHH----HHHHH
Q psy1056 329 EADKNRLKLLS---QAGVDVVILDSS--Q--G------NSIYQIEMIKFIKKEYPDMQVIGGNVL--FGYQ----PRATL 389 (590)
Q Consensus 329 ~~~~e~~~~li---~~gad~i~V~~~--~--G------~~~~~l~~i~~i~~~~~~vpvi~g~v~--s~~~----a~~l~ 389 (590)
+++.+.++.+. +.++|.+.+|.+ + | +.+.+.+.++.+++.. ++||.+|--. +.++ ++.+.
T Consensus 139 ~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~-~~PV~vKi~p~~d~~~~~~~a~~~~ 217 (354)
T 4ef8_A 139 RENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAHFDAAAEILN 217 (354)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh-CCCeEEEecCCCCHHHHHHHHHHHH
Confidence 34455566665 568999999864 2 1 2344567888888887 7899987444 2222 33444
Q ss_pred HCC-CCEEEEcccc---------ccc-----C---CCccccccchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHH
Q psy1056 390 LNF-IYQIEMIKFI---------KKE-----Y---PDMQVIGRNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 390 ~~G-vd~i~v~~~~---------~~~-----~---~~~~~~g~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kala 450 (590)
++| +|+|.+.+.+ ++. . .|+.|-.+.+.++..+.+..+.. ++|||+.|||+|+.|+.+++.
T Consensus 218 ~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~ 297 (354)
T 4ef8_A 218 EFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVL 297 (354)
T ss_dssp TCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHH
T ss_pred hCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHH
Confidence 787 9999653211 110 0 00111111122333344443333 599999999999999999999
Q ss_pred cCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchh
Q psy1056 451 LGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVL 530 (590)
Q Consensus 451 lGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~ 530 (590)
+|||+||+|+.+. |.| -
T Consensus 298 aGAd~V~vgra~l-------------------~~G--------------------------------------------P 314 (354)
T 4ef8_A 298 AGASMVQVGTALQ-------------------EEG--------------------------------------------P 314 (354)
T ss_dssp HTEEEEEECHHHH-------------------HHC--------------------------------------------T
T ss_pred cCCCEEEEhHHHH-------------------HhC--------------------------------------------H
Confidence 9999999999772 000 0
Q ss_pred chHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 531 RFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 531 ~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.++.++..+|+..|...|+.+++||+..
T Consensus 315 ~~~~~i~~~l~~~m~~~G~~si~el~G~ 342 (354)
T 4ef8_A 315 SIFERLTSELLGVMAKKRYQTLDEFRGK 342 (354)
T ss_dssp THHHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 2477889999999999999999999876
No 150
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.99 E-value=4.5e-10 Score=113.75 Aligned_cols=106 Identities=22% Similarity=0.349 Sum_probs=85.4
Q ss_pred CccccCCEEECCCCCHHHHHHHHHHc-----CccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCccccccc
Q psy1056 23 HGFIRDPVCIAPSTTLGKVLQMKKQH-----GFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLTK 97 (590)
Q Consensus 23 ~~m~~~~vtv~~~~ti~eA~~lM~~~-----~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~~ 97 (590)
++|+++++++++++|+.+|++.|.++ +++++||+|++ ++++|++|.+ +++..+ ...++
T Consensus 141 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~---~~lvGivt~~--dll~~~----------~~~~v-- 203 (286)
T 2oux_A 141 AIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE---NHLVGVISLR--DLIVND----------DDTLI-- 203 (286)
T ss_dssp HHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT---CBEEEEEEHH--HHTTSC----------TTSBH--
T ss_pred HhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC---CeEEEEEEHH--HHHcCC----------CCCcH--
Confidence 46999999999999999999999998 88999999976 7999999999 554210 00000
Q ss_pred ccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCC
Q psy1056 98 KITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYP 177 (590)
Q Consensus 98 ~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~ 177 (590)
.
T Consensus 204 ---------------------------------------------------------------------------~---- 204 (286)
T 2oux_A 204 ---------------------------------------------------------------------------A---- 204 (286)
T ss_dssp ---------------------------------------------------------------------------H----
T ss_pred ---------------------------------------------------------------------------H----
Confidence 0
Q ss_pred Ccccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 178 DMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 178 ~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
++|..++.+ ++++.++++.| .++++..+||+|+ +|+++|+||..|+.
T Consensus 205 --~im~~~~~~v~~~~~l~ea~~~m---------~~~~~~~lpVVd~---~g~lvGiIT~~Dil 254 (286)
T 2oux_A 205 --DILNERVISVHVGDDQEDVAQTI---------RDYDFLAVPVTDY---DDHLLGIVTVDDII 254 (286)
T ss_dssp --HHSBSCCCCEETTSBHHHHHHHH---------HHHTCSEEEEECT---TCBEEEEEEHHHHH
T ss_pred --HHcCCCCeeecCCCCHHHHHHHH---------HHcCCcEEEEEcC---CCeEEEEEEHHHHH
Confidence 144333333 78899999999 9999999999998 79999999999997
No 151
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.99 E-value=5.9e-09 Score=108.66 Aligned_cols=156 Identities=13% Similarity=0.073 Sum_probs=102.2
Q ss_pred HcCCcEEEEecCC----Cc-----hhhHHHHHHHHHHh---C---CCceEEeccccC------cHHHHHHHHCCCCEEEE
Q psy1056 340 QAGVDVVILDSSQ----GN-----SIYQIEMIKFIKKE---Y---PDMQVIGGNVLF------GYQPRATLLNFIYQIEM 398 (590)
Q Consensus 340 ~~gad~i~V~~~~----G~-----~~~~l~~i~~i~~~---~---~~vpvi~g~v~s------~~~a~~l~~~Gvd~i~v 398 (590)
...+|.+.++.+- |. ...+.+.++.+++. . .++||++|--.. .+-|+.+.++|+|+|.+
T Consensus 174 ~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v 253 (367)
T 3zwt_A 174 GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIV 253 (367)
T ss_dssp GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 3468999998642 21 12234555555542 1 268999885442 23578888999999977
Q ss_pred ccccc-ccC----------CCccccccchhHHHHHHHHHhcC--CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 399 IKFIK-KEY----------PDMQVIGRNGTAVYRVAEYASRR--GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 399 ~~~~~-~~~----------~~~~~~g~~~~~l~~~~~~~~~~--~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
+..+. +.. .|+.|-.+.+.++..+.+..+.. ++|||+.|||+|+.|+.+++.+|||+||+|+.+.
T Consensus 254 ~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l-- 331 (367)
T 3zwt_A 254 TNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALT-- 331 (367)
T ss_dssp CCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH--
T ss_pred eCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHH--
Confidence 54331 110 01111111111223333333333 6999999999999999999999999999999772
Q ss_pred CCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHHHHHhhhhhhCc
Q psy1056 466 SEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQ 545 (590)
Q Consensus 466 ~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~ 545 (590)
|.| -.++..+..+|+..|.
T Consensus 332 -----------------~~g--------------------------------------------P~~~~~i~~~l~~~m~ 350 (367)
T 3zwt_A 332 -----------------FWG--------------------------------------------PPVVGKVKRELEALLK 350 (367)
T ss_dssp -----------------HHC--------------------------------------------THHHHHHHHHHHHHHH
T ss_pred -----------------hcC--------------------------------------------cHHHHHHHHHHHHHHH
Confidence 001 0247788899999999
Q ss_pred ccCcCcHHHHHHh
Q psy1056 546 DIGAKSLSNLRAM 558 (590)
Q Consensus 546 ~~G~~~i~~l~~~ 558 (590)
..|+.+++|++..
T Consensus 351 ~~G~~~i~e~~G~ 363 (367)
T 3zwt_A 351 EQGFGGVTDAIGA 363 (367)
T ss_dssp HTTCSSHHHHTTG
T ss_pred HcCCCCHHHhhCc
Confidence 9999999999865
No 152
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.98 E-value=8.4e-10 Score=119.54 Aligned_cols=126 Identities=20% Similarity=0.305 Sum_probs=98.4
Q ss_pred cCCCCCHHHHHHHHHhhhccc-----CccccCCEEECCCCCHHHHHHHHHHc-----CccceeeccCCcccceeEEEEec
Q psy1056 2 IHHNCTPEYQANEVLKVKKYK-----HGFIRDPVCIAPSTTLGKVLQMKKQH-----GFCGFPVTENGKLGEKLLGIVTS 71 (590)
Q Consensus 2 ~~~~~~~~~~~~~~~~vk~~~-----~~m~~~~vtv~~~~ti~eA~~lM~~~-----~i~~lpVvd~~~~~~~lvGivT~ 71 (590)
+|+.|+. .+...+..+.++. ++|+++++++++++|+.+|++.|+++ +++++||+|++ ++++|++|.
T Consensus 134 ll~~l~~-~~~~~i~~~l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~---~~lvGiVt~ 209 (473)
T 2zy9_A 134 LKDLLDP-RTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK---GRLKGVLSL 209 (473)
T ss_dssp HTTSSCH-HHHHHHHHHHTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT---SBEEEEEEH
T ss_pred HHhcCCH-HHHHHHHHHhcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC---CcEEEEEEH
Confidence 4567776 4556666676665 58999999999999999999999986 68999999986 799999999
Q ss_pred cccccccCCCCCCCCccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCc
Q psy1056 72 RDVDFLENSANMDLKIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVD 151 (590)
Q Consensus 72 ~Did~l~~~~~~~~~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~d 151 (590)
+ |++..+ ...++
T Consensus 210 ~--Dll~~~----------~~~~v-------------------------------------------------------- 221 (473)
T 2zy9_A 210 R--DLIVAD----------PRTRV-------------------------------------------------------- 221 (473)
T ss_dssp H--HHHHSC----------TTSBG--------------------------------------------------------
T ss_pred H--HHhcCC----------CCCcH--------------------------------------------------------
Confidence 9 554210 00111
Q ss_pred EEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeE
Q psy1056 152 VVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKL 228 (590)
Q Consensus 152 vv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~l 228 (590)
.++|++++.+ ++++.++++.| .++++..+||+|+ +|++
T Consensus 222 ---------------------------~dim~~~~~~v~~~~~l~ea~~~m---------~~~~~~~lpVVDe---~g~l 262 (473)
T 2zy9_A 222 ---------------------------AEIMNPKVVYVRTDTDQEEVARLM---------ADYDFTVLPVVDE---EGRL 262 (473)
T ss_dssp ---------------------------GGTSBSSCCCEESSSBHHHHHHHH---------HHHTCSEEEEECT---TSBE
T ss_pred ---------------------------HHHhCCCCeEEeCCCcHHHHHHHH---------HhcCCcEEEEEcC---CCEE
Confidence 1245433333 77889999999 9999999999998 7999
Q ss_pred EEEEecchhh
Q psy1056 229 LGIVTSRDVD 238 (590)
Q Consensus 229 vGivt~~Dl~ 238 (590)
+|+||.+|+.
T Consensus 263 vGiIT~~Dil 272 (473)
T 2zy9_A 263 VGIVTVDDVL 272 (473)
T ss_dssp EEEEEHHHHH
T ss_pred EEEEehHhhH
Confidence 9999999997
No 153
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.98 E-value=2.7e-10 Score=106.97 Aligned_cols=53 Identities=23% Similarity=0.401 Sum_probs=46.4
Q ss_pred HhhhcccCccccC----CEEE--CCCCCHHHHHHHHHHcCccceeec--cCCcccceeEEEEecccc
Q psy1056 16 LKVKKYKHGFIRD----PVCI--APSTTLGKVLQMKKQHGFCGFPVT--ENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 16 ~~vk~~~~~m~~~----~vtv--~~~~ti~eA~~lM~~~~i~~lpVv--d~~~~~~~lvGivT~~Di 74 (590)
.+|+++ |.++ ++++ ++++|+.+|+++|.+++++++||+ |++ |+++|++|.+|+
T Consensus 11 ~~v~di---m~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~---~~lvGiit~~dl 71 (185)
T 2j9l_A 11 TLAMDV---MKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES---QRLVGFVLRRDL 71 (185)
T ss_dssp CBHHHH---SBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT---CBEEEEEEHHHH
T ss_pred CcHHHH---hcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC---CeEEEEEEHHHH
Confidence 345555 9987 7889 999999999999999999999999 665 799999999964
No 154
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.98 E-value=6.5e-10 Score=101.16 Aligned_cols=45 Identities=20% Similarity=0.301 Sum_probs=42.3
Q ss_pred cCCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 27 RDPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 27 ~~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
++++++++++|+.+|+++|.+++++.+||+|++ |+++|++|.+|+
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~---~~~vGivt~~dl 73 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK---GRVVDIYSKFDV 73 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT---SBEEEEEEHHHH
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC---CcEEEEEeHHHH
Confidence 788999999999999999999999999999976 799999999953
No 155
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.97 E-value=7.2e-09 Score=100.80 Aligned_cols=128 Identities=13% Similarity=0.182 Sum_probs=90.7
Q ss_pred HHHHHHHHHcCCcEEEEecCCCch--hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEccc-ccccCCC
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNS--IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKF-IKKEYPD 408 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~--~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~-~~~~~~~ 408 (590)
.+.++.+.++|++.++++...... ..+.+.++.+++.+|+.++++ ++.+.++++++.++|+|+|.+... .+.. .
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t~~--~ 154 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYTSY--T 154 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTT--S
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCcCC--C
Confidence 355667788999999987654221 245678899999887777765 788999999999999999944221 1111 0
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.... .....+..+++..+..++|+|++|||+|+.++.+++++|||+|++|+.|.
T Consensus 155 ~~~~-~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 155 QGQL-LYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp TTCC-TTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCC-CCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHc
Confidence 0000 01112233444444457999999999999999999999999999999884
No 156
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.97 E-value=9.3e-10 Score=110.92 Aligned_cols=107 Identities=20% Similarity=0.264 Sum_probs=86.0
Q ss_pred cCccccCCEEECCCCCHHHHHHHHHHc-----CccceeeccCCcccceeEEEEeccccccccCCCCCCCCccCCcccccc
Q psy1056 22 KHGFIRDPVCIAPSTTLGKVLQMKKQH-----GFCGFPVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKDLSSPLT 96 (590)
Q Consensus 22 ~~~m~~~~vtv~~~~ti~eA~~lM~~~-----~i~~lpVvd~~~~~~~lvGivT~~Did~l~~~~~~~~~~~~~~~~~l~ 96 (590)
.++|+++++++++++|+.+|++.|.++ +++++||+|++ ++++|++|.+ +++..+ ..
T Consensus 138 ~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~---~~lvGivt~~--dll~~~----------~~---- 198 (278)
T 2yvy_A 138 GGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK---GRLKGVLSLR--DLIVAD----------PR---- 198 (278)
T ss_dssp GGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT---CBEEEEEEHH--HHHHSC----------TT----
T ss_pred HhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC---CCEEEEEEHH--HHhcCC----------CC----
Confidence 357999999999999999999999997 79999999976 7999999999 554210 00
Q ss_pred cccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCcchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcC
Q psy1056 97 KKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTREADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEY 176 (590)
Q Consensus 97 ~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~ 176 (590)
.
T Consensus 199 -------------------------------------------------------------------------------~ 199 (278)
T 2yvy_A 199 -------------------------------------------------------------------------------T 199 (278)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCcccccccccc---hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh
Q psy1056 177 PDMQVIGGNVVT---TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD 238 (590)
Q Consensus 177 ~~~~im~~~~~~---~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~ 238 (590)
+..++|..++.+ ++++.++++.| .++++..+||+|+ +|+++|+||..|+.
T Consensus 200 ~v~~im~~~~~~v~~~~~l~~a~~~m---------~~~~~~~lpVvd~---~g~lvGivT~~Dil 252 (278)
T 2yvy_A 200 RVAEIMNPKVVYVRTDTDQEEVARLM---------ADYDFTVLPVVDE---EGRLVGIVTVDDVL 252 (278)
T ss_dssp BSTTTSBSSCCCEETTSBHHHHHHHH---------HHHTCSEEEEECT---TSBEEEEEEHHHHH
T ss_pred cHHHHhCCCCeEEeCCCCHHHHHHHH---------HhcCCCEEEEEeC---CCeEEEEEEHHHHH
Confidence 011244433333 77889999999 9999999999998 69999999999997
No 157
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.95 E-value=6.7e-09 Score=107.35 Aligned_cols=127 Identities=20% Similarity=0.145 Sum_probs=92.4
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
..+.++.+.+.|++.+.++.. .+. +.++.+++. ++|+++ .+.+.+.++.+.++|+|+|.+.. ....+..
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g--~p~---~~i~~l~~~--g~~v~~-~v~~~~~a~~~~~~GaD~i~v~g---~~~GG~~ 145 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAG--NPS---KYMERFHEA--GIIVIP-VVPSVALAKRMEKIGADAVIAEG---MEAGGHI 145 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSS--CGG---GTHHHHHHT--TCEEEE-EESSHHHHHHHHHTTCSCEEEEC---TTSSEEC
T ss_pred HHHHHHHHHHCCCCEEEECCC--ChH---HHHHHHHHc--CCeEEE-EeCCHHHHHHHHHcCCCEEEEEC---CCCCCCC
Confidence 456788888999999988653 332 345566654 688876 47899999999999999996631 1100111
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCc
Q psy1056 411 VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGE 471 (590)
Q Consensus 411 ~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~ 471 (590)
|...+...+.++. +..++|||++|||.++.++.+++++|||+|++|+.|..+.|++..
T Consensus 146 g~~~~~~ll~~i~---~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~~~ 203 (332)
T 2z6i_A 146 GKLTTMTLVRQVA---TAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAH 203 (332)
T ss_dssp CSSCHHHHHHHHH---HHCSSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCCSC
T ss_pred CCccHHHHHHHHH---HhcCCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCcccccc
Confidence 1011333333443 334799999999999999999999999999999999999999843
No 158
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.92 E-value=7.7e-10 Score=124.15 Aligned_cols=53 Identities=13% Similarity=0.279 Sum_probs=47.3
Q ss_pred HhhhcccCccc--cCCEEECCCCCHHHHHHHHH-HcCccceeeccCCcccceeEEEEecccc
Q psy1056 16 LKVKKYKHGFI--RDPVCIAPSTTLGKVLQMKK-QHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 16 ~~vk~~~~~m~--~~~vtv~~~~ti~eA~~lM~-~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
.+|++. |+ ++++++++++|+.|++++|. +++++++||+|++ ++++|++|.+|+
T Consensus 453 ~~V~di---M~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~---~~lvGiVt~~DL 508 (632)
T 3org_A 453 MTAREI---MHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN---GYLLGAISRKEI 508 (632)
T ss_dssp SBHHHH---CBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT---CBBCCEESHHHH
T ss_pred CcHHHH---hhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC---CeEEEEEEHHHH
Confidence 345555 99 89999999999999999999 8999999999976 799999999964
No 159
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.90 E-value=2.9e-09 Score=109.87 Aligned_cols=166 Identities=17% Similarity=0.155 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHcCCc-EEEEecC--C--C------chhhHHHHHHHHHHhCCCceEEecccc---CcHHHHHHHHCCCC
Q psy1056 329 EADKNRLKLLSQAGVD-VVILDSS--Q--G------NSIYQIEMIKFIKKEYPDMQVIGGNVL---FGYQPRATLLNFIY 394 (590)
Q Consensus 329 ~~~~e~~~~li~~gad-~i~V~~~--~--G------~~~~~l~~i~~i~~~~~~vpvi~g~v~---s~~~a~~l~~~Gvd 394 (590)
+++.+.++.+.+++++ .+.++.+ + | +.+.+.+.++.+++.. ++||.+|=-. ..+-++.+.++|++
T Consensus 141 ~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~~~~~~~a~~~~~aga~ 219 (345)
T 3oix_A 141 EETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPYFDIVHFDQAAAIFNXY 219 (345)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHhCCC
Confidence 4555667777778876 9999864 2 1 2244567777777766 6899987433 34455666777777
Q ss_pred EEEE---c--------ccccccCC-Cccc-ccc-----chhHHHHHHHHHhcC--CCcEEecCCCCCHHHHHHHHHcCCC
Q psy1056 395 QIEM---I--------KFIKKEYP-DMQV-IGR-----NGTAVYRVAEYASRR--GVPVIADGGVQSVGHVMKALALGAS 454 (590)
Q Consensus 395 ~i~v---~--------~~~~~~~~-~~~~-~g~-----~~~~l~~~~~~~~~~--~v~iia~GGi~~~~di~kalalGA~ 454 (590)
+|++ . ++..+..- .-.. .|+ .+.++..+.+..+.. ++|||+.|||+|+.|+.+++.+|||
T Consensus 220 ~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd 299 (345)
T 3oix_A 220 PLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGAS 299 (345)
T ss_dssp CCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCS
T ss_pred ceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCC
Confidence 6643 1 11111000 0001 122 111233444444444 5999999999999999999999999
Q ss_pred EEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhccccceeecccceeEEeeCCchhchHH
Q psy1056 455 TAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNEMDKLKVAQGVSGAIVDKGSVLRFLP 534 (590)
Q Consensus 455 ~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~~~~~~~ 534 (590)
+|++|+.|. |.| -.++.
T Consensus 300 ~V~igra~~-------------------~~g--------------------------------------------P~~~~ 316 (345)
T 3oix_A 300 MVQIGTALH-------------------QEG--------------------------------------------PQIFK 316 (345)
T ss_dssp EEEESHHHH-------------------HHC--------------------------------------------THHHH
T ss_pred EEEEChHHH-------------------hcC--------------------------------------------hHHHH
Confidence 999999862 011 02477
Q ss_pred HHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 535 YLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 535 ~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
.+..+|+..|...|+++++|++..
T Consensus 317 ~i~~~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 317 RITKELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp HHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHhH
Confidence 888999999999999999999865
No 160
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.84 E-value=1.4e-08 Score=105.20 Aligned_cols=131 Identities=15% Similarity=0.052 Sum_probs=84.4
Q ss_pred HHHHHHHHHHcCCcEEEEecCC----Cc-----hhhHHHHHHHHHHhC--------CCceEEeccccC------cHHHHH
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQ----GN-----SIYQIEMIKFIKKEY--------PDMQVIGGNVLF------GYQPRA 387 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~----G~-----~~~~l~~i~~i~~~~--------~~vpvi~g~v~s------~~~a~~ 387 (590)
..+.++.+. .++|.+.++.+. |. .....+.++++++.. +++|+++|-... .+-|+.
T Consensus 155 ~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~ 233 (336)
T 1f76_A 155 YLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADS 233 (336)
T ss_dssp HHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHH
Confidence 334444443 489999888632 11 233457778887765 268999985442 333789
Q ss_pred HHHCCCCEEEEcccccccCC-----Ccccc-cc--------chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCC
Q psy1056 388 TLLNFIYQIEMIKFIKKEYP-----DMQVI-GR--------NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGA 453 (590)
Q Consensus 388 l~~~Gvd~i~v~~~~~~~~~-----~~~~~-g~--------~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA 453 (590)
+.++|+|+|.|+..+....+ ....+ |+ +...+.++++.+. .++|||++|||+|+.|+.++|++||
T Consensus 234 l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~-~~ipVi~~GGI~~~~da~~~l~~GA 312 (336)
T 1f76_A 234 LVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELN-GRLPIIGVGGIDSVIAAREKIAAGA 312 (336)
T ss_dssp HHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHT-TSSCEEEESSCCSHHHHHHHHHHTC
T ss_pred HHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhC-CCCCEEEECCCCCHHHHHHHHHCCC
Confidence 99999999988654311100 00111 11 1122333443332 1699999999999999999999999
Q ss_pred CEEEECcccc
Q psy1056 454 STAMMGSLLA 463 (590)
Q Consensus 454 ~~v~~g~~l~ 463 (590)
|+|++|+.|.
T Consensus 313 d~V~igr~~l 322 (336)
T 1f76_A 313 SLVQIYSGFI 322 (336)
T ss_dssp SEEEESHHHH
T ss_pred CEEEeeHHHH
Confidence 9999999873
No 161
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.80 E-value=3.6e-08 Score=94.21 Aligned_cols=107 Identities=20% Similarity=0.141 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
+.....++.+++.|++.+.|..... ..++.|+.+++.+|+..+.+|+|.|.++++.++++|+++| |+++.+.
T Consensus 25 ~~a~~~a~al~~gGi~~iEvt~~t~---~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fi-vsP~~~~---- 96 (217)
T 3lab_A 25 VHAIPMAKALVAGGVHLLEVTLRTE---AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFI-VSPGLTP---- 96 (217)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTST---THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEE-EESSCCH----
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCc---cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEE-EeCCCcH----
Confidence 4567889999999999999976543 3478999999999988888999999999999999999999 5544332
Q ss_pred ccccccchhHHHHHHHHHhcCCC------cEEecCCCCCHHHHHHHHHcCCCEEE
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGV------PVIADGGVQSVGHVMKALALGASTAM 457 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v------~iia~GGi~~~~di~kalalGA~~v~ 457 (590)
++.+.+.+.++ |++. |+.|+.|+.+|+.+|||.+-
T Consensus 97 ------------evi~~~~~~~v~~~~~~~~~P--G~~TptE~~~A~~~Gad~vK 137 (217)
T 3lab_A 97 ------------ELIEKAKQVKLDGQWQGVFLP--GVATASEVMIAAQAGITQLK 137 (217)
T ss_dssp ------------HHHHHHHHHHHHCSCCCEEEE--EECSHHHHHHHHHTTCCEEE
T ss_pred ------------HHHHHHHHcCCCccCCCeEeC--CCCCHHHHHHHHHcCCCEEE
Confidence 34455555568 9999 99999999999999999993
No 162
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.80 E-value=4.7e-09 Score=115.42 Aligned_cols=50 Identities=24% Similarity=0.407 Sum_probs=45.7
Q ss_pred ccCccccCCEEECCC-CCHHHHHHHHHHcCccceeecc-CCcccceeEEEEeccc
Q psy1056 21 YKHGFIRDPVCIAPS-TTLGKVLQMKKQHGFCGFPVTE-NGKLGEKLLGIVTSRD 73 (590)
Q Consensus 21 ~~~~m~~~~vtv~~~-~ti~eA~~lM~~~~i~~lpVvd-~~~~~~~lvGivT~~D 73 (590)
++++|++++++++++ +|+.+|+++|.+++++++||+| ++ ++++|+||.+|
T Consensus 386 V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~---g~lvGiVt~~D 437 (527)
T 3pc3_A 386 IAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDD---GSVLGVVGQET 437 (527)
T ss_dssp GGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT---CCEEEEEEHHH
T ss_pred HHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC---CEEEEEEEHHH
Confidence 344599999999999 9999999999999999999999 55 79999999994
No 163
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.80 E-value=2e-08 Score=103.12 Aligned_cols=125 Identities=12% Similarity=0.096 Sum_probs=87.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC----------C-----chhhHHHHHHHHHHhCCCceEEec---cccC---cHHHHH
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ----------G-----NSIYQIEMIKFIKKEYPDMQVIGG---NVLF---GYQPRA 387 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~----------G-----~~~~~l~~i~~i~~~~~~vpvi~g---~v~s---~~~a~~ 387 (590)
+...+.++.+.++ +|.+.++..- | +...+.+.++.+++.+ +.||.+| ++.. .+.|+.
T Consensus 71 ~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~~ 148 (318)
T 1vhn_A 71 NELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYRI 148 (318)
T ss_dssp HHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHHH
Confidence 3455677777778 9999988522 1 2345678899999988 5899988 4432 268999
Q ss_pred HHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH-cCCCEEEECccccC
Q psy1056 388 TLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA-LGASTAMMGSLLAG 464 (590)
Q Consensus 388 l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala-lGA~~v~~g~~l~~ 464 (590)
+.++|+|+|.|...+... ++. |. ....+.+++ + ++|||++|||+|+.|+.++++ .|||+||+|+++..
T Consensus 149 l~~~G~d~i~v~g~~~~~--~~~--~~~~~~~i~~i~----~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~ 218 (318)
T 1vhn_A 149 LVEEGVDEVFIHTRTVVQ--SFT--GRAEWKALSVLE----K-RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIG 218 (318)
T ss_dssp HHHTTCCEEEEESSCTTT--TTS--SCCCGGGGGGSC----C-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTT
T ss_pred HHHhCCCEEEEcCCCccc--cCC--CCcCHHHHHHHH----c-CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHh
Confidence 999999999774221111 111 11 222222222 2 699999999999999999999 79999999998853
No 164
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.78 E-value=3.9e-08 Score=96.32 Aligned_cols=124 Identities=16% Similarity=0.275 Sum_probs=89.1
Q ss_pred HHHHHHHHHcCCcEEEEecCCCc-h--hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEE--EcccccccC
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGN-S--IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIE--MIKFIKKEY 406 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~-~--~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~--v~~~~~~~~ 406 (590)
.+.++.+.++|++.+.++..... . ....+.++.+++.+|+.++++ ++.+.++++.+.++|+|+|. +...+...
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~- 168 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSGYTPYS- 168 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTS-
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccccCCCC-
Confidence 45677889999999998765322 1 245678899999887777655 78899999999999999982 21111100
Q ss_pred CCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 407 PDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 407 ~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.++. +.. +..+++.... ++|++++|||+|+.++.+++++|||+|++|+.|.
T Consensus 169 ~~~~--~~~---~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 169 RQEA--GPD---VALIEALCKA-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp CCSS--SCC---HHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred cCCC--CCC---HHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 0011 112 2233444434 7999999999999999999999999999999884
No 165
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.74 E-value=2.3e-07 Score=92.21 Aligned_cols=182 Identities=12% Similarity=0.076 Sum_probs=119.6
Q ss_pred EcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcC
Q psy1056 263 AQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAG 342 (590)
Q Consensus 263 v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~g 342 (590)
+.++....+..+.+.+.+...+=|+++.+.+-| +..||........ -.++..-.+ . + ...+......|
T Consensus 75 i~~~~dp~~~A~~y~~~GA~~IsVltd~~~f~G--s~~~L~~ir~~v~------lPVl~Kdfi-~--d-~~qi~ea~~~G 142 (272)
T 3tsm_A 75 IRPDFDPPALAKAYEEGGAACLSVLTDTPSFQG--APEFLTAARQACS------LPALRKDFL-F--D-PYQVYEARSWG 142 (272)
T ss_dssp SCSSCCHHHHHHHHHHTTCSEEEEECCSTTTCC--CHHHHHHHHHTSS------SCEEEESCC-C--S-THHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHCCCCEEEEeccccccCC--CHHHHHHHHHhcC------CCEEECCcc-C--C-HHHHHHHHHcC
Confidence 456778888999999999999999987776666 4455533321100 011111001 1 1 12355677899
Q ss_pred CcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHH
Q psy1056 343 VDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRV 422 (590)
Q Consensus 343 ad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~ 422 (590)
+|.+.+..+--....+.+.++..+. + ++.+++ +|.+.++++++.++|+|.|-+ +.|. ............++
T Consensus 143 AD~VlLi~a~L~~~~l~~l~~~a~~-l-Gl~~lv-evh~~eEl~~A~~~ga~iIGi---nnr~---l~t~~~dl~~~~~L 213 (272)
T 3tsm_A 143 ADCILIIMASVDDDLAKELEDTAFA-L-GMDALI-EVHDEAEMERALKLSSRLLGV---NNRN---LRSFEVNLAVSERL 213 (272)
T ss_dssp CSEEEEETTTSCHHHHHHHHHHHHH-T-TCEEEE-EECSHHHHHHHTTSCCSEEEE---ECBC---TTTCCBCTHHHHHH
T ss_pred CCEEEEcccccCHHHHHHHHHHHHH-c-CCeEEE-EeCCHHHHHHHHhcCCCEEEE---CCCC---CccCCCChHHHHHH
Confidence 9999987764332333444444444 4 666665 889999999999999998833 2233 22223323333344
Q ss_pred HHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC
Q psy1056 423 AEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS 466 (590)
Q Consensus 423 ~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~ 466 (590)
.+... .++|+|+.|||+|+.|+.++..+||++|.+|+.|..+.
T Consensus 214 ~~~ip-~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~ 256 (272)
T 3tsm_A 214 AKMAP-SDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQH 256 (272)
T ss_dssp HHHSC-TTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSS
T ss_pred HHhCC-CCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCc
Confidence 44433 26899999999999999999999999999999997654
No 166
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.73 E-value=1.2e-07 Score=91.90 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=88.6
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
+...+.++.+++.|++.+.+...... ..+.|+.+++.+|+..+.+|+|.+.++++.++++|+++| ++.+..
T Consensus 46 ~~a~~~a~al~~gGi~~iEvt~~t~~---a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fI-vsP~~~----- 116 (232)
T 4e38_A 46 EDIIPLGKVLAENGLPAAEITFRSDA---AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFV-VSPGFN----- 116 (232)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTT---HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEE-ECSSCC-----
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCC---HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEE-EeCCCC-----
Confidence 35678899999999999999765433 478899999999888888999999999999999999999 433221
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
.++.+++.+.++|+++ |+.|+.|+.+|+.+|||.|-+
T Consensus 117 -----------~~vi~~~~~~gi~~ip--Gv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 117 -----------PNTVRACQEIGIDIVP--GVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp -----------HHHHHHHHHHTCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHcCCCEEc--CCCCHHHHHHHHHcCCCEEEE
Confidence 2344555556899999 899999999999999999954
No 167
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.70 E-value=1e-08 Score=80.61 Aligned_cols=43 Identities=26% Similarity=0.486 Sum_probs=40.1
Q ss_pred CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 28 DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 28 ~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
.+++++|++|+.||+++|.+++++++||+|++ +++||+|.+|+
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~----~lvGIvT~~Di 43 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGD----EILGVVTERDI 43 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETT----EEEEEEEHHHH
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEECC----EEEEEEEHHHH
Confidence 36899999999999999999999999999975 99999999965
No 168
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.66 E-value=1.1e-07 Score=94.86 Aligned_cols=180 Identities=11% Similarity=0.132 Sum_probs=109.7
Q ss_pred EcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEe-ecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHc
Q psy1056 263 AQAGISLEEANVILEKSKKGKLPILNDKGELIALIA-RTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQA 341 (590)
Q Consensus 263 v~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit-~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~ 341 (590)
+.++....+..+.+.+.+...+=|+++++.+-|-.. ...+.+.... .++.. ....+ ...+......
T Consensus 68 i~~~~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~l---------Pvl~k-dfiid---~~qv~~A~~~ 134 (272)
T 3qja_A 68 LATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSI---------PVLRK-DFVVQ---PYQIHEARAH 134 (272)
T ss_dssp -----CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSS---------CEEEE-SCCCS---HHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCC---------CEEEC-ccccC---HHHHHHHHHc
Confidence 455667788888899999999999887766655322 1111111111 11111 01111 1235566789
Q ss_pred CCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHH
Q psy1056 342 GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYR 421 (590)
Q Consensus 342 gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~ 421 (590)
|+|.+++-.+.-....+.+.++..++ + ++.+++ ++.+.+++.++.++|+|+|-+. .+. ....+.....+.+
T Consensus 135 GAD~VlLi~a~l~~~~l~~l~~~a~~-l-Gl~~lv-ev~t~ee~~~A~~~Gad~IGv~---~r~---l~~~~~dl~~~~~ 205 (272)
T 3qja_A 135 GADMLLLIVAALEQSVLVSMLDRTES-L-GMTALV-EVHTEQEADRALKAGAKVIGVN---ARD---LMTLDVDRDCFAR 205 (272)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHH-T-TCEEEE-EESSHHHHHHHHHHTCSEEEEE---SBC---TTTCCBCTTHHHH
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHH-C-CCcEEE-EcCCHHHHHHHHHCCCCEEEEC---CCc---ccccccCHHHHHH
Confidence 99999885433222233444555444 4 666665 8889999999999999999543 222 1111222233333
Q ss_pred HHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 422 VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 422 ~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
+.+... .++|+|+.|||+|+.|+.+++.+||++|.+|+.|..+
T Consensus 206 l~~~v~-~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 206 IAPGLP-SSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp HGGGSC-TTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHhCc-ccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 332221 1699999999999999999999999999999999644
No 169
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.64 E-value=1.3e-08 Score=80.03 Aligned_cols=60 Identities=22% Similarity=0.346 Sum_probs=50.4
Q ss_pred hHHHHHHHHHhccccccccccccCceeeEEeeCCCCCCeEEEEEecchhh--cc-ccccccccchhhccccCCCeeEE
Q psy1056 189 TDQAKNLIDAGVDGLRVGSHGCHGFCGFPVTENGKLGEKLLGIVTSRDVD--FL-ENSANMDLKIEKVMTNVNEIISA 263 (590)
Q Consensus 189 ~~~~~~a~~~m~~~~~v~~~~~~~~~~~pVvd~~~~~~~lvGivt~~Dl~--~~-~~~~~~~~~V~~im~~~~~~~tv 263 (590)
++++.+|++.| .+++++++||+|+ ++++||+|.+|+. .. ........+|+++|++ +++|+
T Consensus 8 ~~tv~ea~~~M---------~~~~i~~~~V~d~----~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~--~~iTV 70 (70)
T 3ghd_A 8 KDTVDRVAKIL---------SRNKAGSAVVMEG----DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK--NPVKI 70 (70)
T ss_dssp TCBHHHHHHHH---------HHTTCSEEEEEET----TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE--CTTCC
T ss_pred CCcHHHHHHHH---------HHcCCCEEEEEEC----CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCC--CCeEC
Confidence 88999999999 9999999999986 8999999999996 22 2333356899999998 87764
No 170
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.51 E-value=5.3e-07 Score=86.32 Aligned_cols=130 Identities=16% Similarity=0.092 Sum_probs=89.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC-CceEEeccccCcHHHHHHHHCCCCEEEEcccccc---
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP-DMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKK--- 404 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~--- 404 (590)
++..+.++.+.+.|++.+.++.... ...+.++.+++.+| +.++.++.+.+.++++.+.++|+|+| ++.....
T Consensus 22 ~~~~~~~~~~~~~G~~~iev~~~~~---~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~~~~~ 97 (205)
T 1wa3_A 22 EEAKEKALAVFEGGVHLIEITFTVP---DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHLDEEIS 97 (205)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETTST---THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSCCHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCCCCHHHH
Confidence 3455678888899999999876542 33556788887765 57777888889999999999999999 7322210
Q ss_pred ----------------cCC-------Cccccccc---hhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHcCCCEEE
Q psy1056 405 ----------------EYP-------DMQVIGRN---GTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALALGASTAM 457 (590)
Q Consensus 405 ----------------~~~-------~~~~~g~~---~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalalGA~~v~ 457 (590)
..+ |....... ...+..+.+..... ++|++++|||. +.++.+.+.+||++|.
T Consensus 98 ~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~ 176 (205)
T 1wa3_A 98 QFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVG 176 (205)
T ss_dssp HHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEE
T ss_pred HHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEE
Confidence 000 00000111 11123334444444 69999999995 7899999999999999
Q ss_pred ECcccc
Q psy1056 458 MGSLLA 463 (590)
Q Consensus 458 ~g~~l~ 463 (590)
+|+.+.
T Consensus 177 vGs~i~ 182 (205)
T 1wa3_A 177 VGSALV 182 (205)
T ss_dssp ECHHHH
T ss_pred ECcccc
Confidence 999884
No 171
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.50 E-value=4e-07 Score=88.31 Aligned_cols=121 Identities=18% Similarity=0.163 Sum_probs=81.8
Q ss_pred HHHHHHH-c-CCcEEEEecC------CCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEccccccc
Q psy1056 334 RLKLLSQ-A-GVDVVILDSS------QGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKE 405 (590)
Q Consensus 334 ~~~~li~-~-gad~i~V~~~------~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~ 405 (590)
.++...+ . +-+.+-+..- ..+....++..+.+.+. +..++.--+.++..++++.++|++++-. .....
T Consensus 92 ~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~--Gf~Vlpy~~dd~~~akrl~~~G~~aVmP--lg~pI 167 (265)
T 1wv2_A 92 TCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKD--GFDVMVYTSDDPIIARQLAEIGCIAVMP--LAGLI 167 (265)
T ss_dssp HHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHSCCSEEEE--CSSST
T ss_pred HHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHhCCCEEEe--CCccC
Confidence 3444444 3 5666665442 13344455566666554 4555544677899999999999999922 01111
Q ss_pred CCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 406 YPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 406 ~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
-+|.|+ ++..+..+.+ ..++|||++|||.+|.|+++|+.||||+|++|+.+..
T Consensus 168 ---GsG~Gi~~~~lI~~I~e---~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 168 ---GSGLGICNPYNLRIILE---EAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp ---TCCCCCSCHHHHHHHHH---HCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred ---CCCCCcCCHHHHHHHHh---cCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 123355 6555555544 3469999999999999999999999999999999974
No 172
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.50 E-value=6.2e-07 Score=88.10 Aligned_cols=60 Identities=17% Similarity=0.359 Sum_probs=56.1
Q ss_pred cccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 246 MDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 246 ~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
...+|+++|++ +++++++++++.+|+++|.+++++++||+|++|+++|+||..|+++...
T Consensus 5 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 5 VKLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred ccCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 35789999998 9999999999999999999999999999999999999999999998753
No 173
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.48 E-value=1.5e-06 Score=90.23 Aligned_cols=130 Identities=12% Similarity=0.073 Sum_probs=88.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC----------C-----chhhHHHHHHHHHHhCCCceEEecc-cc---------CcH
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ----------G-----NSIYQIEMIKFIKKEYPDMQVIGGN-VL---------FGY 383 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~----------G-----~~~~~l~~i~~i~~~~~~vpvi~g~-v~---------s~~ 383 (590)
....+.++.+.++|+|.|.++..- | +...+.+.++.+++.. ++||.+|- .+ +.+
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHH
Confidence 445567778888999999998521 1 2245678888898887 78988852 11 245
Q ss_pred HHHHHHHCCCCEEEEcccccccCCCcccc-----c-cchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHcCCCEE
Q psy1056 384 QPRATLLNFIYQIEMIKFIKKEYPDMQVI-----G-RNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALALGASTA 456 (590)
Q Consensus 384 ~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~-----g-~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalalGA~~v 456 (590)
-++.+.++|+|+|.|+..+... ++.+- . .....+..+.+ .. ++|||+.|||+|+.|+.++++ |||+|
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~--g~~g~~~~~~~~~~~~~i~~ik~---~~~~iPVianGgI~s~eda~~~l~-GaD~V 222 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALL--ALSTKANREIPPLRHDWVHRLKG---DFPQLTFVTNGGIRSLEEALFHLK-RVDGV 222 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC------------CCCCCHHHHHHHHH---HCTTSEEEEESSCCSHHHHHHHHT-TSSEE
T ss_pred HHHHHHHcCCCEEEEecCchhc--ccCcccccCCCcccHHHHHHHHH---hCCCCeEEEECCcCCHHHHHHHHh-CCCEE
Confidence 5788999999999774221100 11110 0 12223333433 34 699999999999999999998 99999
Q ss_pred EECccccCC
Q psy1056 457 MMGSLLAGT 465 (590)
Q Consensus 457 ~~g~~l~~~ 465 (590)
|+|+.+...
T Consensus 223 ~iGRa~l~~ 231 (350)
T 3b0p_A 223 MLGRAVYED 231 (350)
T ss_dssp EECHHHHHC
T ss_pred EECHHHHhC
Confidence 999987544
No 174
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.46 E-value=1.5e-07 Score=115.84 Aligned_cols=136 Identities=12% Similarity=0.010 Sum_probs=88.4
Q ss_pred HHHHHHHHcCCcEEEEecCCCch--hhHHHHHHHHHHhCCCceEEecc---ccCcHHHHHHHHCCCCEE-EEcccccccC
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNS--IYQIEMIKFIKKEYPDMQVIGGN---VLFGYQPRATLLNFIYQI-EMIKFIKKEY 406 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~--~~~l~~i~~i~~~~~~vpvi~g~---v~s~~~a~~l~~~Gvd~i-~v~~~~~~~~ 406 (590)
+.++.+++.|+.+-.+..+-|.+ +...+.++.+ ++++|.-- +.....+....++|+|++ .+.++..+.
T Consensus 664 ~~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~i~~l-----G~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~ea- 737 (2051)
T 2uv8_G 664 PLIKELRSKGYPIQFLTIGAGVPSLEVASEYIETL-----GLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRG- 737 (2051)
T ss_dssp HHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHS-----CCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSC-
T ss_pred HHHHHHHHcCCCcceEEecCCCCchhhHHHHHHHc-----CCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCc-
Confidence 67788889999983333344543 2223333333 56665423 334455577778899994 334443332
Q ss_pred CCccccc-cchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHH-----------HcCCCEEEECccccCCCCCCCceEe
Q psy1056 407 PDMQVIG-RNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKAL-----------ALGASTAMMGSLLAGTSEAPGEYFF 474 (590)
Q Consensus 407 ~~~~~~g-~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kal-----------alGA~~v~~g~~l~~~~es~~~~~~ 474 (590)
.|..||- .....+..+.+++...++||||+|||.+|.+++.|| +||||+|+||++|+.|.||+.+-.+
T Consensus 738 GGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~ 817 (2051)
T 2uv8_G 738 GGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDA 817 (2051)
T ss_dssp SEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHH
T ss_pred CCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCHHH
Confidence 1222221 112233334555555689999999999999999999 9999999999999999999987544
No 175
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.44 E-value=1.3e-07 Score=93.14 Aligned_cols=177 Identities=19% Similarity=0.136 Sum_probs=103.3
Q ss_pred CHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEE
Q psy1056 268 SLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVI 347 (590)
Q Consensus 268 ~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~ 347 (590)
...+..+.+.+.+.+.+-|.+.++...|-.+. ++++..... ..-.+.+...+. ..+.++.++++|++.++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~-----~~ipv~v~ggI~----~~~~~~~~l~~Gad~V~ 102 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQA-----MDIKVELSGGIR----DDDTLAAALATGCTRVN 102 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHH-----CSSEEEEESSCC----SHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHh-----cCCcEEEECCcC----CHHHHHHHHHcCCCEEE
Confidence 56677788999999999988765554444444 444443211 112223322222 13457888899999998
Q ss_pred EecCC-CchhhHHHHHHHHHHhCCCceEEeccc-----c---------C-cHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 348 LDSSQ-GNSIYQIEMIKFIKKEYPDMQVIGGNV-----L---------F-GYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 348 V~~~~-G~~~~~l~~i~~i~~~~~~vpvi~g~v-----~---------s-~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
+.... .++. .+..+.+.++...++.-++ . + .+.++.+.++|++.|.+. ..++. ..+
T Consensus 103 lg~~~l~~p~----~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~-~~~~~---~~~ 174 (244)
T 1vzw_A 103 LGTAALETPE----WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVT-DIAKD---GTL 174 (244)
T ss_dssp ECHHHHHCHH----HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEE-EC---------
T ss_pred ECchHhhCHH----HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEe-ccCcc---ccc
Confidence 86532 1222 2333333322111111111 1 3 455788999999988442 11122 111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHc---CCCEEEECccccCC
Q psy1056 412 IGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALAL---GASTAMMGSLLAGT 465 (590)
Q Consensus 412 ~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalal---GA~~v~~g~~l~~~ 465 (590)
.|.....+..+. ...++|||++|||+++.|+.+++++ |||+|++|+.|...
T Consensus 175 ~g~~~~~~~~i~---~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~ 228 (244)
T 1vzw_A 175 QGPNLELLKNVC---AATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAK 228 (244)
T ss_dssp -CCCHHHHHHHH---HTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred CCCCHHHHHHHH---HhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcC
Confidence 222333333333 3447999999999999999999999 99999999988543
No 176
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.44 E-value=2.7e-06 Score=88.30 Aligned_cols=131 Identities=14% Similarity=0.051 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCC-CceEEeccc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYP-DMQVIGGNV----- 379 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~-~vpvi~g~v----- 379 (590)
+..+.++.+.++|.|.|.|+.++|+ .+..++.++.+++..+ +.||.++=-
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~ 232 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWG 232 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccccc
Confidence 4455677888999999999976531 1235788899999884 677876422
Q ss_pred ---cCcHH----HHHHHHCCCCEEEEcccccccCCC-ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHc
Q psy1056 380 ---LFGYQ----PRATLLNFIYQIEMIKFIKKEYPD-MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALAL 451 (590)
Q Consensus 380 ---~s~~~----a~~l~~~Gvd~i~v~~~~~~~~~~-~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalal 451 (590)
.+.++ ++.|.++|+|+|.++......... ..+-++....+..+++. .++|||+.|||+++.++.++|+.
T Consensus 233 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~---~~iPVi~~Ggi~t~e~a~~~l~~ 309 (349)
T 3hgj_A 233 EGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR---VGLRTGAVGLITTPEQAETLLQA 309 (349)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH---HCCEEEECSSCCCHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH---cCceEEEECCCCCHHHHHHHHHC
Confidence 13344 778888999999885322211000 00111222233334433 36999999999999999999999
Q ss_pred C-CCEEEECcccc
Q psy1056 452 G-ASTAMMGSLLA 463 (590)
Q Consensus 452 G-A~~v~~g~~l~ 463 (590)
| ||+|++|++|.
T Consensus 310 G~aD~V~iGR~~l 322 (349)
T 3hgj_A 310 GSADLVLLGRVLL 322 (349)
T ss_dssp TSCSEEEESTHHH
T ss_pred CCceEEEecHHHH
Confidence 9 99999999885
No 177
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.42 E-value=1.3e-07 Score=93.20 Aligned_cols=178 Identities=17% Similarity=0.109 Sum_probs=103.7
Q ss_pred CHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEE
Q psy1056 268 SLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVI 347 (590)
Q Consensus 268 ~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~ 347 (590)
...+..+.+.+.+.+.+-|.+.++...+-.+. +.++..... ..-.+.+...+ . ..+.++.++++|++.++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~-----~~ipv~v~ggi--~--~~~~~~~~l~~Gad~V~ 101 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGK-----LDVQVELSGGI--R--DDESLAAALATGCARVN 101 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHH-----CSSEEEEESSC--C--SHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHh-----cCCcEEEECCC--C--CHHHHHHHHHcCCCEEE
Confidence 45667778888999999888755444333333 444433211 11122222222 2 23457888899999998
Q ss_pred EecCC-CchhhHHHHHHHHHHhCCCceEE---ec------cc----------cCcHHHHHHHHCCCCEEEEcccccccCC
Q psy1056 348 LDSSQ-GNSIYQIEMIKFIKKEYPDMQVI---GG------NV----------LFGYQPRATLLNFIYQIEMIKFIKKEYP 407 (590)
Q Consensus 348 V~~~~-G~~~~~l~~i~~i~~~~~~vpvi---~g------~v----------~s~~~a~~l~~~Gvd~i~v~~~~~~~~~ 407 (590)
+.... .++ +.+..+.+.++...++ ++ ++ ...+.++.+.++|++.|.+ +++..+
T Consensus 102 lg~~~l~~p----~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~---~~~~~~ 174 (244)
T 2y88_A 102 VGTAALENP----QWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVV---TDITKD 174 (244)
T ss_dssp ECHHHHHCH----HHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEE---EETTTT
T ss_pred ECchHhhCh----HHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEE---EecCCc
Confidence 86532 122 2233333332211111 11 11 1257778999999998843 222211
Q ss_pred CccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHc---CCCEEEECccccCCC
Q psy1056 408 DMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALAL---GASTAMMGSLLAGTS 466 (590)
Q Consensus 408 ~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalal---GA~~v~~g~~l~~~~ 466 (590)
...-|.....+.++ .+..++|||++|||.++.|+.+++.+ ||++|++|+.|....
T Consensus 175 -~~~~g~~~~~~~~l---~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~ 232 (244)
T 2y88_A 175 -GTLGGPNLDLLAGV---ADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARR 232 (244)
T ss_dssp -TTTSCCCHHHHHHH---HTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTS
T ss_pred -cccCCCCHHHHHHH---HHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCC
Confidence 11112233333333 33457999999999999999999999 999999999886543
No 178
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.40 E-value=3.2e-06 Score=87.31 Aligned_cols=131 Identities=16% Similarity=0.038 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCCCceEEeccc------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYPDMQVIGGNV------ 379 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~~vpvi~g~v------ 379 (590)
+..+.++.+.++|.|.+.|+.++|+ .+..++.++.+++.. +.||.++=-
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~ 223 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCC
Confidence 4456677888999999999976531 133578899999988 788887621
Q ss_pred --cC----cHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-
Q psy1056 380 --LF----GYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG- 452 (590)
Q Consensus 380 --~s----~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG- 452 (590)
.+ .+-++.|.++|+|+|.|+..+.....-..+-++....+..+++. .++|||+.|||+++.++.++|+.|
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~---~~iPVi~~Ggi~s~~~a~~~l~~G~ 300 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ---ADMATGAVGMITDGSMAEEILQNGR 300 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH---HCCEEEECSSCCSHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHHcCC
Confidence 12 35567888899999987532211100000111122233344433 369999999999999999999999
Q ss_pred CCEEEECccccC
Q psy1056 453 ASTAMMGSLLAG 464 (590)
Q Consensus 453 A~~v~~g~~l~~ 464 (590)
||+|++|++|..
T Consensus 301 aD~V~iGR~~i~ 312 (338)
T 1z41_A 301 ADLIFIGRELLR 312 (338)
T ss_dssp CSEEEECHHHHH
T ss_pred ceEEeecHHHHh
Confidence 999999998853
No 179
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.40 E-value=1.4e-06 Score=85.97 Aligned_cols=137 Identities=19% Similarity=0.237 Sum_probs=93.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCc--h-hhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE------
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGN--S-IYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM------ 398 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~--~-~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v------ 398 (590)
.+..+.++.+.++|++.+++...... . ....+.++.+++.+ ++|+++ |.+.+.++++.+.++|+|++.+
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 35677888999999998887543322 2 22357788888876 799996 6777899999999999999987
Q ss_pred ----------c-----c--ccccc---------------------CC--------Cc-----ccc---cc-chhHHHHHH
Q psy1056 399 ----------I-----K--FIKKE---------------------YP--------DM-----QVI---GR-NGTAVYRVA 423 (590)
Q Consensus 399 ----------~-----~--~~~~~---------------------~~--------~~-----~~~---g~-~~~~l~~~~ 423 (590)
. + ..... .. |. ++. |. +...+..+.
T Consensus 110 ~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~ 189 (252)
T 1ka9_F 110 RPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTR 189 (252)
T ss_dssp CTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHH
T ss_pred CcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHH
Confidence 0 0 00000 00 00 000 11 000123334
Q ss_pred HHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC
Q psy1056 424 EYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS 466 (590)
Q Consensus 424 ~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~ 466 (590)
+.....++|+|++|||+++.|+.+++..|||+|++|+.|....
T Consensus 190 ~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~ 232 (252)
T 1ka9_F 190 MVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGE 232 (252)
T ss_dssp HHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTS
T ss_pred HHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCC
Confidence 4444457999999999999999999999999999999996443
No 180
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.40 E-value=3.2e-06 Score=83.51 Aligned_cols=134 Identities=18% Similarity=0.223 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch---hhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE-------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS---IYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM------- 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~---~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v------- 398 (590)
+..+.++.+.++|++.+++....+.. ....+.++.+++.. ++|+++ |.+.++++++.+.++|||++.+
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~ 109 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI-DIPFTVGGGIHDFETASELILRGADKVSINTAAVEN 109 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhC
Confidence 55677888999999999987655432 22357778888776 789886 4667899999999999999977
Q ss_pred ---------c-----c--ccc-c-------------------cC-C--------Ccccc--------cc-chhHHHHHHH
Q psy1056 399 ---------I-----K--FIK-K-------------------EY-P--------DMQVI--------GR-NGTAVYRVAE 424 (590)
Q Consensus 399 ---------~-----~--~~~-~-------------------~~-~--------~~~~~--------g~-~~~~l~~~~~ 424 (590)
. + ... + .. . |.... |. +...+..+.+
T Consensus 110 p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~ 189 (253)
T 1thf_D 110 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF 189 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHH
T ss_pred hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHH
Confidence 0 0 000 0 00 0 00000 10 0001233444
Q ss_pred HHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 425 YASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 425 ~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
.....++|+|++|||+++.|+.+++..|||+|++|+.|..
T Consensus 190 l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 190 VRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp HGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 4444579999999999999999999999999999998853
No 181
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.36 E-value=5.4e-06 Score=85.59 Aligned_cols=130 Identities=15% Similarity=0.087 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--------------------c----hhhHHHHHHHHHHhCCCceEEecccc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--------------------N----SIYQIEMIKFIKKEYPDMQVIGGNVL----- 380 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--------------------~----~~~~l~~i~~i~~~~~~vpvi~g~v~----- 380 (590)
+..+.+..+.++|.|.|.|+.++| . .+..++.++.+++.. +.||.++=-.
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~ 223 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHP 223 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCST
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccC
Confidence 344567778889999999996542 1 133578889999988 7888764221
Q ss_pred -------CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-
Q psy1056 381 -------FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG- 452 (590)
Q Consensus 381 -------s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG- 452 (590)
..+-++.|.++|+|+|.|+...........+-++....+..+++ ..++|||+.|||+++.++.++|..|
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~---~~~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRR---EADIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHH---HTTCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHH---HcCCcEEeeCCCCCHHHHHHHHHCCC
Confidence 23557788889999998753221110000111222222333333 3469999999999999999999999
Q ss_pred CCEEEECcccc
Q psy1056 453 ASTAMMGSLLA 463 (590)
Q Consensus 453 A~~v~~g~~l~ 463 (590)
||+|++|+++.
T Consensus 301 aD~V~iGR~~l 311 (340)
T 3gr7_A 301 ADLVFLGRELL 311 (340)
T ss_dssp CSEEEECHHHH
T ss_pred eeEEEecHHHH
Confidence 99999999885
No 182
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.36 E-value=2.2e-06 Score=84.72 Aligned_cols=176 Identities=10% Similarity=0.071 Sum_probs=111.4
Q ss_pred CCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEE
Q psy1056 267 ISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVV 346 (590)
Q Consensus 267 ~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i 346 (590)
....+..+.+.+.+...+=|+++++.+-|-...-..++.. ... .++..--+ . + ...+....+.|+|.+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-v~l-------Pvl~kdfI--~-d-~~qi~~a~~~GAD~V 132 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-VDL-------PLLRKDFV--V-D-PFMLEEARAFGASAA 132 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-CCS-------CEEEESCC--C-S-HHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-cCC-------CEEECCcC--C-C-HHHHHHHHHcCCCEE
Confidence 5678888899999999999998877766643322222211 011 11111111 1 1 224566888999999
Q ss_pred EEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHH
Q psy1056 347 ILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYA 426 (590)
Q Consensus 347 ~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 426 (590)
++...--. ..+.+.+...+.. ++.+++ ++.+.+++.++.++|+|+|-+. .+. +++.+.......++.+..
T Consensus 133 lL~~~~l~-~~l~~l~~~a~~l--Gl~~lv-ev~~~~E~~~a~~~gad~IGvn---~~~---l~~~~~dl~~~~~L~~~i 202 (254)
T 1vc4_A 133 LLIVALLG-ELTGAYLEEARRL--GLEALV-EVHTERELEIALEAGAEVLGIN---NRD---LATLHINLETAPRLGRLA 202 (254)
T ss_dssp EEEHHHHG-GGHHHHHHHHHHH--TCEEEE-EECSHHHHHHHHHHTCSEEEEE---SBC---TTTCCBCTTHHHHHHHHH
T ss_pred EECccchH-HHHHHHHHHHHHC--CCeEEE-EECCHHHHHHHHHcCCCEEEEc---ccc---CcCCCCCHHHHHHHHHhC
Confidence 98654222 2333444443343 555554 7888999999999999998442 222 223333333344444444
Q ss_pred hcC--CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 427 SRR--GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 427 ~~~--~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
... ++|+|++|||.|+.|+.+... ||++|.+|+.|...
T Consensus 203 ~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 203 RKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp HHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred ccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 321 589999999999999999999 99999999998644
No 183
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.34 E-value=6.9e-06 Score=79.03 Aligned_cols=108 Identities=21% Similarity=0.202 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
.+..+.++.+++.|++.+.+.... ....+.++.+++.+|+..+.+|.+.+.++++.++++|+|++ +....
T Consensus 28 ~~~~~~~~al~~gGv~~iel~~k~---~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v----~~p~~--- 97 (214)
T 1wbh_A 28 EHAVPMAKALVAGGVRVLNVTLRT---ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFA----ISPGL--- 97 (214)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESCS---TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCE----EESSC---
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC---hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEE----EcCCC---
Confidence 356788999999999999997543 23467888899999888888999999999999999999999 22211
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
. .++.+.+...++|+|. |+.|+.++.+|+.+|||+|.+
T Consensus 98 ------d----~~v~~~~~~~g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 98 ------T----EPLLKAATEGTIPLIP--GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp ------C----HHHHHHHHHSSSCEEE--EESSHHHHHHHHHTTCCEEEE
T ss_pred ------C----HHHHHHHHHhCCCEEE--ecCCHHHHHHHHHCCCCEEEE
Confidence 1 2455556667899998 699999999999999999977
No 184
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.34 E-value=4.6e-06 Score=80.78 Aligned_cols=108 Identities=17% Similarity=0.194 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
++..+.++.+++.|++.+.+..... ...+.++.+++.+|++.+.+|.+.+.++++.++++|+|++ ++.. .
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~---~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v-~~p~---~--- 98 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSE---AAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFV-VTPG---L--- 98 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTST---THHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSS---C---
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCc---hHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEE-EECC---C---
Confidence 3567889999999999999975432 3467889899999988888999999999999999999999 2211 1
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
. .++.+.+.+.+.|+|. |+.|+.++.+|+.+|||+|.+
T Consensus 99 ------d----~~v~~~ar~~g~~~i~--Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 99 ------N----PKIVKLCQDLNFPITP--GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp ------C----HHHHHHHHHTTCCEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred ------C----HHHHHHHHHhCCCEEe--ccCCHHHHHHHHHCCCCEEEE
Confidence 1 2334444456789888 699999999999999999977
No 185
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.32 E-value=2.7e-06 Score=83.59 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCc---hhhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE------
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGN---SIYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM------ 398 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~---~~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v------ 398 (590)
.+..+.++.+.+.|++.+++....+. .....+.++.+++.+ ++|+++ +.+.++++++.+.++|+|+|.+
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 35677888999999998888654332 223467888898887 788885 5677999999999999999987
Q ss_pred ------cccccc----c-------------------------CC-----------Ccccc--------cc-chhHHHHHH
Q psy1056 399 ------IKFIKK----E-------------------------YP-----------DMQVI--------GR-NGTAVYRVA 423 (590)
Q Consensus 399 ------~~~~~~----~-------------------------~~-----------~~~~~--------g~-~~~~l~~~~ 423 (590)
..+... . .+ |.... |. +...+..++
T Consensus 112 ~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~ 191 (253)
T 1h5y_A 112 NPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIR 191 (253)
T ss_dssp CTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHH
T ss_pred CcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHH
Confidence 000000 0 00 00000 00 000111223
Q ss_pred HHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 424 EYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 424 ~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+.....++|++++|||.++.|+.+++..||++|++|+.|.
T Consensus 192 ~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 192 RVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp HHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHH
Confidence 3333346999999999999999999999999999999884
No 186
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.31 E-value=4.1e-06 Score=87.36 Aligned_cols=131 Identities=12% Similarity=0.036 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch------------------------hhHHHHHHHHHHhCC-CceEEeccc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS------------------------IYQIEMIKFIKKEYP-DMQVIGGNV----- 379 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~------------------------~~~l~~i~~i~~~~~-~vpvi~g~v----- 379 (590)
+..+.+..+.++|.|.|.|+.++|+. ++.++.++.+++..+ +.||.++=-
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 44456777888999999999754211 235688889998874 567775321
Q ss_pred ----cC----cHHHHHHHHCCCCEEEEcccccccCCC-ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 380 ----LF----GYQPRATLLNFIYQIEMIKFIKKEYPD-MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 380 ----~s----~~~a~~l~~~Gvd~i~v~~~~~~~~~~-~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
.+ .+-++.|.++|+|+|.++......... ..+-++....+..+++. .++|||+.|||+++.++.++|+
T Consensus 239 ~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~---~~iPVi~~GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 239 GRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE---AKLPVTSAWGFGTPQLAEAALQ 315 (363)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH---HTCCEEECSSTTSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH---cCCcEEEeCCCCCHHHHHHHHH
Confidence 12 334778888999999885432211000 00111222223344443 3699999999999999999999
Q ss_pred cC-CCEEEECcccc
Q psy1056 451 LG-ASTAMMGSLLA 463 (590)
Q Consensus 451 lG-A~~v~~g~~l~ 463 (590)
.| ||+|++|++|.
T Consensus 316 ~G~aD~V~iGR~~l 329 (363)
T 3l5l_A 316 ANQLDLVSVGRAHL 329 (363)
T ss_dssp TTSCSEEECCHHHH
T ss_pred CCCccEEEecHHHH
Confidence 99 99999999885
No 187
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.31 E-value=9.5e-06 Score=78.77 Aligned_cols=120 Identities=15% Similarity=0.102 Sum_probs=81.7
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCCCceEEeccc-----cCc----HHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYPDMQVIGGNV-----LFG----YQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~~vpvi~g~v-----~s~----~~a~~l~~~Gvd~i~v 398 (590)
..++..++.|++.+-+... .|+...+.+.++.+++..+ |+++|-+ .+. +.++.+.++|+|+|..
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~--pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t 151 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP--SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT 151 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT--TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc--CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 3456777899999875332 2444556677888988874 5454442 243 3467788899999922
Q ss_pred cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 399 IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
+ .. +...|.+...+..+.+... .++||+++|||+|+.|+.+.+.+|||.+.+++.+
T Consensus 152 s----tg---~~~gga~~~~i~~v~~~v~-~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~~ 207 (225)
T 1mzh_A 152 S----TG---FAPRGTTLEEVRLIKSSAK-GRIKVKASGGIRDLETAISMIEAGADRIGTSSGI 207 (225)
T ss_dssp C----CS---CSSSCCCHHHHHHHHHHHT-TSSEEEEESSCCSHHHHHHHHHTTCSEEEESCHH
T ss_pred C----CC---CCCCCCCHHHHHHHHHHhC-CCCcEEEECCCCCHHHHHHHHHhCchHHHHccHH
Confidence 1 11 2112336666666666542 2599999999999999999999999988766544
No 188
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.30 E-value=5.4e-06 Score=82.75 Aligned_cols=134 Identities=16% Similarity=0.134 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch---------------------hhHHHHHHHHHHhCCCceEEe---ccc----cC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS---------------------IYQIEMIKFIKKEYPDMQVIG---GNV----LF 381 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~---------------------~~~l~~i~~i~~~~~~vpvi~---g~v----~s 381 (590)
...+.++.+.++|+|.++++.+..++ ....+.++.+++.++++|+++ -+. +.
T Consensus 32 ~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~ 111 (268)
T 1qop_A 32 QSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGI 111 (268)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhH
Confidence 45677889999999999998744321 223477899998855788764 221 12
Q ss_pred cHHHHHHHHCCCCEEEE---ccc-----------------------cccc--------CCC------ccc-ccc-ch---
Q psy1056 382 GYQPRATLLNFIYQIEM---IKF-----------------------IKKE--------YPD------MQV-IGR-NG--- 416 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v---~~~-----------------------~~~~--------~~~------~~~-~g~-~~--- 416 (590)
.+.++.+.++|+|++.+ ..+ +... ..+ ..| .|. +.
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~ 191 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRGAL 191 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--
T ss_pred HHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCc
Confidence 56778899999998876 000 0000 000 011 122 11
Q ss_pred hHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 417 TAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 417 ~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.....+++..+..++||+++|||+|+.++.+++..|||+|++|+.+.
T Consensus 192 ~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 192 PLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred hHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 11222333333346999999999999999999999999999999884
No 189
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.30 E-value=2.3e-07 Score=90.55 Aligned_cols=128 Identities=15% Similarity=0.121 Sum_probs=79.1
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHH-hCCCceEEeccccCcHHHHHHHHCCCCEEEEccc--cc-----
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKK-EYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKF--IK----- 403 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~-~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~--~~----- 403 (590)
...++.+...|+|+| |-++..+. .+.+..+.+ .| ++|+++ ++.+.++|.+.++.|++.|....+ ++
T Consensus 80 ~~EAqilea~GaD~I--Desevltp--ad~~~~I~k~~f-~vpfv~-~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~a 153 (291)
T 3o07_A 80 FVEAQIIEALEVDYI--DESEVLTP--ADWTHHIEKDKF-KVPFVC-GAKDLGEALRRINEGAAMIRTKGEAGTGDVSEA 153 (291)
T ss_dssp HHHHHHHHHTTCSEE--EEETTSCC--SCSSCCCCGGGC-SSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCTHHH
T ss_pred HHHHHHHHHcCCCEE--ecccCCCH--HHHHHHhhhhcC-CCcEEe-eCCCHHHHHHHHHCCCCEEEecCcCCCccHHHH
Confidence 456777888999988 55443220 112222233 34 788877 899999999999999999943211 00
Q ss_pred -----------ccCCCc-ccc-ccch----h-HHHHHHHHHhcCCCcE--EecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 404 -----------KEYPDM-QVI-GRNG----T-AVYRVAEYASRRGVPV--IADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 404 -----------~~~~~~-~~~-g~~~----~-~l~~~~~~~~~~~v~i--ia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+...++ +.- .++. . ....+.+.....++|| |+.|||.|+.|+.+++.+|||+||+|+.+.
T Consensus 154 v~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~ 233 (291)
T 3o07_A 154 VKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIF 233 (291)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHh
Confidence 000001 000 0000 0 0112233333346888 579999999999999999999999999886
Q ss_pred CC
Q psy1056 464 GT 465 (590)
Q Consensus 464 ~~ 465 (590)
.+
T Consensus 234 ~s 235 (291)
T 3o07_A 234 KS 235 (291)
T ss_dssp GS
T ss_pred CC
Confidence 53
No 190
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.28 E-value=2e-06 Score=89.43 Aligned_cols=66 Identities=21% Similarity=0.245 Sum_probs=56.9
Q ss_pred CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCCCCCCceEeecCeeeeeeeccccHHHHhcccCCCcccchhhhcc
Q psy1056 430 GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMSRKDGGAAAMDRYFHNE 509 (590)
Q Consensus 430 ~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~es~~~~~~~~g~~~k~~~g~~s~~a~~~~~~~~~~~~~~~~~~ 509 (590)
++|||+.|||.|+.|+.+.+.+|||+||+|+.|. |+|
T Consensus 277 ~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~-------------------y~G------------------------ 313 (354)
T 3tjx_A 277 GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQ-------------------EEG------------------------ 313 (354)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHH-------------------HHC------------------------
T ss_pred CCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhh-------------------hcC------------------------
Confidence 5899999999999999999999999999999772 122
Q ss_pred ccceeecccceeEEeeCCchhchHHHHHhhhhhhCcccCcCcHHHHHHh
Q psy1056 510 MDKLKVAQGVSGAIVDKGSVLRFLPYLQCGLKHGCQDIGAKSLSNLRAM 558 (590)
Q Consensus 510 ~~~~~~~eg~~~~~~~~~~~~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 558 (590)
-.++.++..+|+..|.--|.++|+|++.+
T Consensus 314 --------------------P~~~~~I~~~L~~~L~~~G~~si~e~~G~ 342 (354)
T 3tjx_A 314 --------------------PSIFERLTSELLGVMAKKRYQTLDEFRGK 342 (354)
T ss_dssp --------------------TTHHHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred --------------------chHHHHHHHHHHHHHHHcCCCCHHHHhCh
Confidence 02377888999999999999999999876
No 191
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.28 E-value=5e-06 Score=82.72 Aligned_cols=135 Identities=17% Similarity=0.135 Sum_probs=88.4
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC--------------------Cch-hhHHHHHHHHHHhCCCceEEec---cc----c
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ--------------------GNS-IYQIEMIKFIKKEYPDMQVIGG---NV----L 380 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~--------------------G~~-~~~l~~i~~i~~~~~~vpvi~g---~v----~ 380 (590)
+...+.+..|.++|+|++.+..+. |.+ ..+++.++.+|+.++++|+++= |. +
T Consensus 34 ~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g 113 (271)
T 3nav_A 34 EQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARG 113 (271)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHh
Confidence 345678999999999999997543 211 2456788999988668888742 21 2
Q ss_pred CcHHHHHHHHCCCCEEEE--------------------------ccccccc--C------CCcc------c-ccc-c--h
Q psy1056 381 FGYQPRATLLNFIYQIEM--------------------------IKFIKKE--Y------PDMQ------V-IGR-N--G 416 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v--------------------------~~~~~~~--~------~~~~------~-~g~-~--~ 416 (590)
...-++.+.++|+|++.+ +..++.. + .+|- | .|. + .
T Consensus 114 ~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~ 193 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKAN 193 (271)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CC
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCc
Confidence 345588899999999877 1111000 0 0111 1 122 1 1
Q ss_pred hHHHHH-HHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 417 TAVYRV-AEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 417 ~~l~~~-~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
..+.+. .+..+..++|++..|||+++.++.++++.|||+|.+|+.|.
T Consensus 194 ~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 194 MPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp HHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred hhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 223332 32222346999999999999999999999999999999884
No 192
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.28 E-value=4e-06 Score=81.13 Aligned_cols=116 Identities=17% Similarity=0.122 Sum_probs=75.1
Q ss_pred HHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc-cccccCCCcccccc
Q psy1056 336 KLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-FIKKEYPDMQVIGR 414 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-~~~~~~~~~~~~g~ 414 (590)
+.+.+.|++.+++..... .++.+++.+++..+.+ .+.+.++++.+.++|+|+|-+.. ..+.. +.| .
T Consensus 82 ~~a~~~gad~v~l~~~~~-------~~~~~~~~~~~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~f~~~~---~~g--~ 148 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGSF-------SPKQIRARFPHLHIGR-SVHSLEEAVQAEKEDADYVLFGHVFETDC---KKG--L 148 (221)
T ss_dssp HHHHTTTCCEEEECTTSC-------CHHHHHHHCTTCEEEE-EECSHHHHHHHHHTTCSEEEEECCC-------------
T ss_pred HHHHHcCCCEEEeCCCcc-------CHHHHHHHCCCCEEEE-EcCCHHHHHHHHhCCCCEEEECCccccCC---CCC--C
Confidence 556778999998864321 1233444444444444 67799999999999999996522 11211 111 1
Q ss_pred chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 415 NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 415 ~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
....+..+++.....++|++++||| |+.++.++++.||++|.+|+.+..+
T Consensus 149 ~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 149 EGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp --CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred CCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhCC
Confidence 1111223333333347999999999 9999999999999999999988543
No 193
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.27 E-value=8.2e-07 Score=87.63 Aligned_cols=133 Identities=19% Similarity=0.248 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--c-hhhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE-------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--N-SIYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM------- 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--~-~~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v------- 398 (590)
+..+.++.+.+.|++.+++..-.. . .....+.++.+++.+ ++|+++ |.+.++++++.+.++|+|.+.+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~-~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~d 114 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN 114 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhC
Confidence 567889999999999998865321 1 112367888888887 789885 5777999999999999999976
Q ss_pred ---------c-----c--ccc-c-------cC----------C------Cc--ccccc-chhH-----------HHHHHH
Q psy1056 399 ---------I-----K--FIK-K-------EY----------P------DM--QVIGR-NGTA-----------VYRVAE 424 (590)
Q Consensus 399 ---------~-----~--~~~-~-------~~----------~------~~--~~~g~-~~~~-----------l~~~~~ 424 (590)
. + ... + .. + .. .|.+. ..+. +..+.+
T Consensus 115 p~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g~~~~~~~~ 194 (247)
T 3tdn_A 115 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF 194 (247)
T ss_dssp THHHHHHHHHHC--------------------------------------------------------------------
T ss_pred hHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCCCCHHHHHH
Confidence 0 0 000 0 00 0 00 00110 0000 111222
Q ss_pred HHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 425 YASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 425 ~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
..+..++|+|+.|||+++.|+.+++.+|||+|++|+.+.
T Consensus 195 i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~ 233 (247)
T 3tdn_A 195 VRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAV 233 (247)
T ss_dssp ---------------------------------------
T ss_pred HHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHH
Confidence 223346999999999999999999999999999999884
No 194
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.27 E-value=2e-06 Score=83.70 Aligned_cols=99 Identities=14% Similarity=0.084 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCC-CcEEe
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRG-VPVIA 435 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~-v~iia 435 (590)
.++..+.+.+. +..++.....+++.++++.++|+++| +.. .... =+|.|+ ++..+..+.+. ..+ +|||+
T Consensus 113 tv~aa~~L~k~--Gf~Vlpy~~~D~~~ak~l~~~G~~aV-mPl-g~pI---GsG~Gi~~~~~L~~i~~~--~~~~vPVI~ 183 (268)
T 2htm_A 113 TLKAAERLIEE--DFLVLPYMGPDLVLAKRLAALGTATV-MPL-AAPI---GSGWGVRTRALLELFARE--KASLPPVVV 183 (268)
T ss_dssp HHHHHHHHHHT--TCEECCEECSCHHHHHHHHHHTCSCB-EEB-SSST---TTCCCSTTHHHHHHHHHT--TTTSSCBEE
T ss_pred HHHHHHHHHHC--CCEEeeccCCCHHHHHHHHhcCCCEE-Eec-CccC---cCCcccCCHHHHHHHHHh--cCCCCeEEE
Confidence 34444444443 33333223468899999999999988 210 1111 123355 54444444431 346 99999
Q ss_pred cCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 436 DGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 436 ~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
+|||.+|.|+++|+.||||+|++|+.+..+
T Consensus 184 ~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a 213 (268)
T 2htm_A 184 DAGLGLPSHAAEVMELGLDAVLVNTAIAEA 213 (268)
T ss_dssp ESCCCSHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred eCCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 999999999999999999999999999743
No 195
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.26 E-value=5e-06 Score=80.62 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
+..+.++.+++.|++.+.+.... ....+.++.+++.+|++.+.+|.+.+.++++.++++|+|++ +....
T Consensus 39 ~~~~~~~al~~gGv~~iel~~k~---~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v----~~p~~---- 107 (225)
T 1mxs_A 39 DILPLADALAAGGIRTLEVTLRS---QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFV----VTPGI---- 107 (225)
T ss_dssp GHHHHHHHHHHTTCCEEEEESSS---THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSE----ECSSC----
T ss_pred HHHHHHHHHHHCCCCEEEEecCC---ccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEE----EeCCC----
Confidence 56788999999999999997543 23467888899999989888999999999999999999999 22211
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 410 QVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 410 ~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
. .++.+.+...++|+|. |+.|+.++.+|+.+|||+|.+
T Consensus 108 -----d----~~v~~~~~~~g~~~i~--G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 108 -----T----EDILEAGVDSEIPLLP--GISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp -----C----HHHHHHHHHCSSCEEC--EECSHHHHHHHHTTTCCEEEE
T ss_pred -----C----HHHHHHHHHhCCCEEE--eeCCHHHHHHHHHCCCCEEEE
Confidence 1 2455555567899998 699999999999999999977
No 196
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.24 E-value=9.6e-06 Score=80.53 Aligned_cols=135 Identities=17% Similarity=0.175 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHcCCcEEEEecC------CCc--------------h-hhHHHHHHHHHHhCCCceEEec---cc----c
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSS------QGN--------------S-IYQIEMIKFIKKEYPDMQVIGG---NV----L 380 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~------~G~--------------~-~~~l~~i~~i~~~~~~vpvi~g---~v----~ 380 (590)
+...+.++.|.++|+|++++..+ .|. + ..+++.++.+|+.++++|+++= |. +
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g 111 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANG 111 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhh
Confidence 34667899999999999999843 221 1 2346888889887557887742 32 2
Q ss_pred CcHHHHHHHHCCCCEEEE--------------------------ccccccc--C------CCc------cc-ccc-c--h
Q psy1056 381 FGYQPRATLLNFIYQIEM--------------------------IKFIKKE--Y------PDM------QV-IGR-N--G 416 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v--------------------------~~~~~~~--~------~~~------~~-~g~-~--~ 416 (590)
...-++.+.++|+|++.+ +..+... + ++| .| .|. + .
T Consensus 112 ~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~ 191 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAG 191 (267)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC-------
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCc
Confidence 244578899999999877 1111000 0 011 11 122 1 1
Q ss_pred hHHHH-HHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 417 TAVYR-VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 417 ~~l~~-~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
..+.+ +.+..+..++|++.+|||+++.++.+++..|||+|++|+.|.
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 192 EPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp -CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 11222 233323346999999999999999999999999999999883
No 197
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.24 E-value=7.5e-06 Score=81.51 Aligned_cols=181 Identities=16% Similarity=0.105 Sum_probs=97.2
Q ss_pred CHHHHHHHHHhcCCCcceEEcCCCc--eEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcE
Q psy1056 268 SLEEANVILEKSKKGKLPILNDKGE--LIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDV 345 (590)
Q Consensus 268 ~l~ea~~~m~~~~~~~lpVvd~~g~--l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~ 345 (590)
+..+..+.+.+.+.+.+.+.|.+.. ..| ...++++.... ...-++++...+.. .+.+..+.+.|++.
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g--~~~~~i~~i~~-----~~~iPvi~~ggi~~----~~~i~~~~~~Gad~ 99 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSG--YDTEMIRFVRP-----LTTLPIIASGGAGK----MEHFLEAFLAGADK 99 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSC--CCHHHHHHHGG-----GCCSCEEEESCCCS----THHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCc--ccHHHHHHHHH-----hcCCCEEEECCCCC----HHHHHHHHHcCCcH
Confidence 4567788889999999999875421 111 11222222211 11223333333322 23455666789999
Q ss_pred EEEecCCCchhhHHHHHHHHHHhCC--CceE-Eeccc--------------------cCcHHHHHHHHCCCCEEEEcccc
Q psy1056 346 VILDSSQGNSIYQIEMIKFIKKEYP--DMQV-IGGNV--------------------LFGYQPRATLLNFIYQIEMIKFI 402 (590)
Q Consensus 346 i~V~~~~G~~~~~l~~i~~i~~~~~--~vpv-i~g~v--------------------~s~~~a~~l~~~Gvd~i~v~~~~ 402 (590)
+++-...-....-.+.+..+.+.++ .-.+ +.-.+ ...+-++.+.++|++.|.+ +
T Consensus 100 v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~---t 176 (266)
T 2w6r_A 100 ALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILL---T 176 (266)
T ss_dssp EECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEE---E
T ss_pred hhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEE---E
Confidence 9875543200001122333322332 1111 11111 1245578899999999944 2
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS 466 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~ 466 (590)
....++ ...|.. +..+.+.....++|+|++|||+++.|+.+++..|||+|++|+.|....
T Consensus 177 ~~~~~g-~~~g~~---~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~ 236 (266)
T 2w6r_A 177 SIDRDG-TKSGYD---TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFRE 236 (266)
T ss_dssp ETTTTT-TCSCCC---HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC---
T ss_pred eecCCC-CcCCCC---HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCC
Confidence 211111 011222 223344444457999999999999999999999999999999996543
No 198
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.23 E-value=1.4e-05 Score=84.90 Aligned_cols=120 Identities=14% Similarity=0.137 Sum_probs=85.5
Q ss_pred HHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc
Q psy1056 335 LKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR 414 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~ 414 (590)
+.+...+|+|++.++.+--....+.+.++..++ + ++.+++ +|.+.+++.++.++|++.|-+ +.|. +.....
T Consensus 123 i~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~-l-gm~~Lv-Evh~~eE~~~A~~lga~iIGi---nnr~---L~t~~~ 193 (452)
T 1pii_A 123 IYLARYYQADACLLMLSVLDDDQYRQLAAVAHS-L-EMGVLT-EVSNEEEQERAIALGAKVVGI---NNRD---LRDLSI 193 (452)
T ss_dssp HHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHH-T-TCEEEE-EECSHHHHHHHHHTTCSEEEE---ESEE---TTTTEE
T ss_pred HHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHH-c-CCeEEE-EeCCHHHHHHHHHCCCCEEEE---eCCC---CCCCCC
Confidence 445888999999988775333344455555555 3 677766 999999999999999998833 2233 222222
Q ss_pred chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 415 NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 415 ~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
......++..... .++++|+.|||.|+.|+.++..+ |++|.+|+.|+.+
T Consensus 194 dl~~~~~L~~~ip-~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~ 242 (452)
T 1pii_A 194 DLNRTRELAPKLG-HNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH 242 (452)
T ss_dssp CTHHHHHHHHHHC-TTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC
T ss_pred CHHHHHHHHHhCC-CCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC
Confidence 2233334444443 26899999999999999999999 9999999999544
No 199
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.22 E-value=3.9e-06 Score=82.38 Aligned_cols=121 Identities=11% Similarity=0.148 Sum_probs=83.5
Q ss_pred HHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHC-CCCEEEEcccccccCCCccccc
Q psy1056 335 LKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLN-FIYQIEMIKFIKKEYPDMQVIG 413 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~-Gvd~i~v~~~~~~~~~~~~~~g 413 (590)
+.....+|+|++.++.+--....+.+.++..++ + +..+++ +|.+.++++++.++ |+|.|-+ +.|. +.+.+
T Consensus 116 i~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~-l-Gl~~lv-Ev~~~eE~~~A~~l~g~~iIGi---nnr~---l~t~~ 186 (251)
T 1i4n_A 116 VKLASSVGADAILIIARILTAEQIKEIYEAAEE-L-GMDSLV-EVHSREDLEKVFSVIRPKIIGI---NTRD---LDTFE 186 (251)
T ss_dssp HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHT-T-TCEEEE-EECSHHHHHHHHTTCCCSEEEE---ECBC---TTTCC
T ss_pred HHHHHHcCCCEEEEecccCCHHHHHHHHHHHHH-c-CCeEEE-EeCCHHHHHHHHhcCCCCEEEE---eCcc---cccCC
Confidence 444888999999988764222334444554444 4 676666 99999999999999 9998833 2233 22223
Q ss_pred cchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC
Q psy1056 414 RNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS 466 (590)
Q Consensus 414 ~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~ 466 (590)
.......++.+... .++++|+.|||.|+.|+.++..+ |++|.+|+.|+.+.
T Consensus 187 ~d~~~~~~l~~~ip-~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr~~ 237 (251)
T 1i4n_A 187 IKKNVLWELLPLVP-DDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKAE 237 (251)
T ss_dssp BCTTHHHHHGGGSC-TTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHHCS
T ss_pred CCHHHHHHHHHhCC-CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcCCc
Confidence 22222223322221 25899999999999999999999 99999999996553
No 200
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.21 E-value=5.6e-07 Score=90.60 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=80.9
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
.+.++.+.++|+|.+ +.+.+.. ..+.++.+++.+.+.++++ ++.+.+++++++++|+|.|.+.. +. -+|
T Consensus 90 ide~qil~aaGAD~I--d~s~~~~--~~~li~~i~~~~~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g---~~---gTG 158 (297)
T 4adt_A 90 FVEAQILEELKVDML--DESEVLT--MADEYNHINKHKFKTPFVC-GCTNLGEALRRISEGASMIRTKG---EA---GTG 158 (297)
T ss_dssp HHHHHHHHHTTCSEE--EEETTSC--CSCSSCCCCGGGCSSCEEE-EESSHHHHHHHHHHTCSEEEECC---CT---TSC
T ss_pred HHHHHHHHHcCCCEE--EcCCCCC--HHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHhCCCCEEEECC---Cc---CCC
Confidence 455666678999998 4444311 1123444445434678877 78999999999999999995431 11 111
Q ss_pred -------c-----------------cc-c-----hhHHHHHHHHHhcCCCcEE--ecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 412 -------I-----------------GR-N-----GTAVYRVAEYASRRGVPVI--ADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 412 -------~-----------------g~-~-----~~~l~~~~~~~~~~~v~ii--a~GGi~~~~di~kalalGA~~v~~g 459 (590)
| +. + ...+..+.+.....++|++ ++|||+|+.|+.+++.+|||+|++|
T Consensus 159 ~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVG 238 (297)
T 4adt_A 159 NIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVG 238 (297)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEES
T ss_pred chHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEh
Confidence 0 10 0 1112223333333457876 9999999999999999999999999
Q ss_pred ccccCC
Q psy1056 460 SLLAGT 465 (590)
Q Consensus 460 ~~l~~~ 465 (590)
+.|..+
T Consensus 239 sai~~a 244 (297)
T 4adt_A 239 SGIFES 244 (297)
T ss_dssp HHHHTS
T ss_pred HHHHcC
Confidence 998654
No 201
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.21 E-value=6.5e-06 Score=81.90 Aligned_cols=133 Identities=17% Similarity=0.161 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--------------------c-hhhHHHHHHHHHHhCCCceEEec---cccCcHHH
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--------------------N-SIYQIEMIKFIKKEYPDMQVIGG---NVLFGYQP 385 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--------------------~-~~~~l~~i~~i~~~~~~vpvi~g---~v~s~~~a 385 (590)
...+.++.+.++|+|.++++.+.. . .....+.++.+++.. ++|+++- +.......
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~~~~~ 111 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVLLSYYKPIMFRSL 111 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEEECCSHHHHSCCT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEEecCcHHHHHHH
Confidence 456778889999999999986432 1 133467788888775 7888752 11111123
Q ss_pred HHHHHCCCCEEEEc--------------------------ccccccC--------CC------ccc-ccc-c---hhHHH
Q psy1056 386 RATLLNFIYQIEMI--------------------------KFIKKEY--------PD------MQV-IGR-N---GTAVY 420 (590)
Q Consensus 386 ~~l~~~Gvd~i~v~--------------------------~~~~~~~--------~~------~~~-~g~-~---~~~l~ 420 (590)
..+.++|+|++.+. .++.... .+ ..| .|. + ...+.
T Consensus 112 ~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~ 191 (262)
T 1rd5_A 112 AKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVES 191 (262)
T ss_dssp HHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHH
T ss_pred HHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHH
Confidence 44889999988650 0000000 01 111 121 1 11222
Q ss_pred HHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 421 RVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 421 ~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.++...+..++||+++|||+|+.++.+++++|||.|.+|+.+.
T Consensus 192 ~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~ 234 (262)
T 1rd5_A 192 LIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMV 234 (262)
T ss_dssp HHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHH
Confidence 3444433347999999999999999999999999999999884
No 202
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.17 E-value=1.7e-05 Score=77.99 Aligned_cols=132 Identities=16% Similarity=0.055 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHcCCcEEEEec------CCCc---------------hhhHHHHHHHHHHhCCCceEEeccccC-------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDS------SQGN---------------SIYQIEMIKFIKKEYPDMQVIGGNVLF------- 381 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~------~~G~---------------~~~~l~~i~~i~~~~~~vpvi~g~v~s------- 381 (590)
...+.++.+.+. +|.++++. ..|. .....+.++.+++.. ++|+.+....+
T Consensus 20 ~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~ 97 (248)
T 1geq_A 20 STLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIYRAGV 97 (248)
T ss_dssp HHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHHHHHHCH
T ss_pred HHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccchhhhcCH
Confidence 556778888888 99999993 3332 123467888888876 67877655333
Q ss_pred cHHHHHHHHCCCCEEEEcc------------------------c-ccccC--C----Cccc-------ccc--c-----h
Q psy1056 382 GYQPRATLLNFIYQIEMIK------------------------F-IKKEY--P----DMQV-------IGR--N-----G 416 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v~~------------------------~-~~~~~--~----~~~~-------~g~--~-----~ 416 (590)
.+.++.+.++|+|+|.+.. . .+... . +..+ .|. + .
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~ 177 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPK 177 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CCCH
T ss_pred HHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCCh
Confidence 4788999999999997610 0 00000 0 0000 111 1 1
Q ss_pred hHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 417 TAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 417 ~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
..+..+++..+..++|++++|||+++.++.+.+.+|||+|.+|+.+.
T Consensus 178 ~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~ 224 (248)
T 1geq_A 178 TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALV 224 (248)
T ss_dssp HHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred hHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHH
Confidence 22333444444447999999999999999999999999999999883
No 203
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.16 E-value=1.6e-06 Score=67.33 Aligned_cols=48 Identities=17% Similarity=0.334 Sum_probs=44.7
Q ss_pred CeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccC
Q psy1056 259 EIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRD 307 (590)
Q Consensus 259 ~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~ 307 (590)
+++++++++++.+|+++|.+++++.+||+|+ |+++|+||.+|+++...
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 4678999999999999999999999999997 99999999999998754
No 204
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.16 E-value=1.5e-06 Score=67.42 Aligned_cols=43 Identities=26% Similarity=0.486 Sum_probs=39.8
Q ss_pred CCEEECCCCCHHHHHHHHHHcCccceeeccCCcccceeEEEEecccc
Q psy1056 28 DPVCIAPSTTLGKVLQMKKQHGFCGFPVTENGKLGEKLLGIVTSRDV 74 (590)
Q Consensus 28 ~~vtv~~~~ti~eA~~lM~~~~i~~lpVvd~~~~~~~lvGivT~~Di 74 (590)
+++++++++|+.+|+++|.+++++++||+|++ +++|++|.+|+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~----~l~Givt~~dl 43 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGD----EILGVVTERDI 43 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETT----EEEEEEEHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEECC----EEEEEEEHHHH
Confidence 46799999999999999999999999999975 99999999964
No 205
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.15 E-value=1.5e-05 Score=76.46 Aligned_cols=118 Identities=19% Similarity=0.124 Sum_probs=79.5
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--ccccCc-HHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GNVLFG-YQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~v~s~-~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
.++.+.++|++.+.++...+ .....+.++.+++. +.++++ -++.+. +.++.+.++|+|+|.+.. . ++
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~-~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~----g---~~ 138 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTD-VLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAVHT----G---TD 138 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSC-HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEEC----C---HH
T ss_pred HHHHHHhcCCCEEEEeCCCC-hhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcC----C---Cc
Confidence 47888999999999876543 22334556666665 566654 234443 668999999999984421 1 21
Q ss_pred c--ccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 411 V--IGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 411 ~--~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
+ .+. ....+.++++.. .++|++++|||+ +.++.+++.+|||+|.+|+.+..
T Consensus 139 g~~~~~~~~~~i~~l~~~~--~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 139 QQAAGRKPIDDLITMLKVR--RKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp HHHTTCCSHHHHHHHHHHC--SSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHT
T ss_pred ccccCCCCHHHHHHHHHHc--CCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcC
Confidence 1 111 223333444332 269999999995 99999999999999999998853
No 206
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.12 E-value=2.5e-05 Score=77.67 Aligned_cols=133 Identities=19% Similarity=0.242 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch---------------------hhHHHHHHHHHHhCCCceEEec---c-cc---C
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS---------------------IYQIEMIKFIKKEYPDMQVIGG---N-VL---F 381 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~---------------------~~~l~~i~~i~~~~~~vpvi~g---~-v~---s 381 (590)
...+.++.+.++|+|++.+..+..++ ..+++.++.+++..|++|+++= | +. .
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~ 111 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGL 111 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhH
Confidence 45678899999999999998754321 2345778999998778898761 1 11 2
Q ss_pred cHHHHHHHHCCCCEEEE--------------------------ccccccc--------CCCc------c-cccc-ch---
Q psy1056 382 GYQPRATLLNFIYQIEM--------------------------IKFIKKE--------YPDM------Q-VIGR-NG--- 416 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v--------------------------~~~~~~~--------~~~~------~-~~g~-~~--- 416 (590)
...++.+.++|+|++.+ +..+... ..+| . ..|. +.
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~ 191 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPY 191 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------C
T ss_pred HHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCc
Confidence 45678889999999876 0000000 0000 0 1122 21
Q ss_pred hHHH-HHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 417 TAVY-RVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 417 ~~l~-~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
..+. .+....+..++|++++|||+++.++.+ +..|||+|++|+.|.
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~ 238 (262)
T 2ekc_A 192 ERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGSALV 238 (262)
T ss_dssp HHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHH
T ss_pred ccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHH
Confidence 1122 233333334799999999999999988 889999999999984
No 207
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.08 E-value=3.4e-05 Score=80.32 Aligned_cols=127 Identities=13% Similarity=0.073 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCCCceEEec----c-cc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYPDMQVIGG----N-VL 380 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~~vpvi~g----~-v~ 380 (590)
+..+.++.+.++|+|.|.|+.++|+ .+..++.++.+++..++-||.++ + ..
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 162 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 4455677778899999999876542 12357889999998853377762 1 11
Q ss_pred -------CcHH----HHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHH
Q psy1056 381 -------FGYQ----PRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKAL 449 (590)
Q Consensus 381 -------s~~~----a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kal 449 (590)
+.++ ++.|.++|+|+|.++..+... .. +.....+..++ +..++|||+.||| ++.++.++|
T Consensus 242 ~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~---~~--~~~~~~~~~v~---~~~~iPvi~~Ggi-t~~~a~~~l 312 (364)
T 1vyr_A 242 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG---GK--PYSEAFRQKVR---ERFHGVIIGAGAY-TAEKAEDLI 312 (364)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB---CC--CCCHHHHHHHH---HHCCSEEEEESSC-CHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC---CC--cccHHHHHHHH---HHCCCCEEEECCc-CHHHHHHHH
Confidence 2333 788889999999775322111 00 11222222333 3457999999999 999999999
Q ss_pred HcC-CCEEEECccccCC
Q psy1056 450 ALG-ASTAMMGSLLAGT 465 (590)
Q Consensus 450 alG-A~~v~~g~~l~~~ 465 (590)
+.| ||+|++|+++..-
T Consensus 313 ~~g~aD~V~~gR~~l~~ 329 (364)
T 1vyr_A 313 GKGLIDAVAFGRDYIAN 329 (364)
T ss_dssp HTTSCSEEEESHHHHHC
T ss_pred HCCCccEEEECHHHHhC
Confidence 999 9999999988643
No 208
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.06 E-value=4.7e-05 Score=73.71 Aligned_cols=119 Identities=14% Similarity=0.069 Sum_probs=84.5
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCCC--ceEEecccc--CcHHHHHH----HHCCCCEEEEc
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYPD--MQVIGGNVL--FGYQPRAT----LLNFIYQIEMI 399 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~~--vpvi~g~v~--s~~~a~~l----~~~Gvd~i~v~ 399 (590)
..++..++.|++-+-+..+ .|+...+.+.|+.+++..++ +++|+ +.. +.+...++ .++|+|+|+.|
T Consensus 99 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIl-Et~~Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 99 YETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVII-ECCYLTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEEC-CGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEE-ecCCCCHHHHHHHHHHHHHHCcCEEECC
Confidence 3567778889998766543 36667788888888877543 56665 333 66666655 78999999432
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
- ||...|.|+..+...++... .+++|.++|||||..|+.+.+.+||+.+...+
T Consensus 178 T-------Gf~~ggAt~~dv~lmr~~vg-~~v~VKasGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 178 T-------GFGTHGATPEDVKLMKDTVG-DKALVKAAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp C-------SSSSCCCCHHHHHHHHHHHG-GGSEEEEESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred C-------CCCCCCCCHHHHHHHHHhhC-CCceEEEeCCCCCHHHHHHHHHhcccceeccc
Confidence 1 13222337777766776653 46999999999999999999999999875543
No 209
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.05 E-value=3.3e-05 Score=80.51 Aligned_cols=127 Identities=11% Similarity=-0.017 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch------------------------hhHHHHHHHHHHhCCCceEEeccc------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS------------------------IYQIEMIKFIKKEYPDMQVIGGNV------ 379 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~------------------------~~~l~~i~~i~~~~~~vpvi~g~v------ 379 (590)
+..+.++.+.++|+|.|.|+.++|+. +...+.++.+++..+.-||.++=-
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~ 241 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLN 241 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccC
Confidence 44456777788999999998765311 235678888988874227776211
Q ss_pred -----cCcHH----HHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 380 -----LFGYQ----PRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 380 -----~s~~~----a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
.+.++ ++.|.++|+|+|.++..+... .. +.....+..++ +..++|||+.||| ++.++.++|+
T Consensus 242 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~---~~--~~~~~~~~~i~---~~~~iPvi~~Ggi-~~~~a~~~l~ 312 (365)
T 2gou_A 242 GTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDD---AP--DTPVSFKRALR---EAYQGVLIYAGRY-NAEKAEQAIN 312 (365)
T ss_dssp SCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB---CC--CCCHHHHHHHH---HHCCSEEEEESSC-CHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC---CC--CccHHHHHHHH---HHCCCcEEEeCCC-CHHHHHHHHH
Confidence 12333 788889999999775322111 00 11122223333 3356999999999 9999999999
Q ss_pred cC-CCEEEECccccCC
Q psy1056 451 LG-ASTAMMGSLLAGT 465 (590)
Q Consensus 451 lG-A~~v~~g~~l~~~ 465 (590)
.| ||+|++|+.|..-
T Consensus 313 ~g~aD~V~igR~~i~~ 328 (365)
T 2gou_A 313 DGLADMIGFGRPFIAN 328 (365)
T ss_dssp TTSCSEEECCHHHHHC
T ss_pred CCCcceehhcHHHHhC
Confidence 99 9999999988643
No 210
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.04 E-value=3e-05 Score=74.38 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccc
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVI 412 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~ 412 (590)
+.++.+.+.|++.+++.. . . .+.++..++ + +.+++++ +.|++++.++.++|+|+|.+- .+.. .
T Consensus 71 ~~i~~a~~~Gad~V~~~~--~-~---~~~~~~~~~-~-g~~~~~g-~~t~~e~~~a~~~G~d~v~v~--~t~~------~ 133 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN--I-H---SEVIRRAVG-Y-GMTVCPG-CATATEAFTALEAGAQALKIF--PSSA------F 133 (212)
T ss_dssp HHHHHHHHTTCCEEECSS--C-C---HHHHHHHHH-T-TCEEECE-ECSHHHHHHHHHTTCSEEEET--THHH------H
T ss_pred HHHHHHHHcCCCEEEeCC--C-C---HHHHHHHHH-c-CCCEEee-cCCHHHHHHHHHCCCCEEEEe--cCCC------C
Confidence 467888899999997322 1 1 233444433 4 5677776 889999999999999999541 1100 0
Q ss_pred ccchhHHHHHHHHHhcC--CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 413 GRNGTAVYRVAEYASRR--GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 413 g~~~~~l~~~~~~~~~~--~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
.... +.+..... ++|++++|||. +.++.+++++||++|.+|+.|..
T Consensus 134 --g~~~---~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 134 --GPQY---IKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp --CHHH---HHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCC
T ss_pred --CHHH---HHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 2222 33333333 49999999996 99999999999999999998853
No 211
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.03 E-value=1.4e-05 Score=77.10 Aligned_cols=122 Identities=14% Similarity=0.076 Sum_probs=82.6
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE--eccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI--GGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi--~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
.++.+.++|++.+.++...+. +.+.+.++.+++. +.+.+ +=++.|.+.++.+.+.|+|++.+....+.. +.|
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~-~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~---~~g 148 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHI-ATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAE---LAG 148 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCH-HHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHH---HHT
T ss_pred HHHHHHhcCCCEEEEecCCCH-HHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCccceeeeeccccc---cCC
Confidence 567888999999999876542 2234555666665 45443 335568889999999999988441111111 211
Q ss_pred cccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 412 IGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 412 ~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.......+..+++... .++|++++||| ++..+.++++.|||.+.+|+++.
T Consensus 149 ~~~~~~~l~~i~~~~~-~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~ 198 (218)
T 3jr2_A 149 IGWTTDDLDKMRQLSA-LGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALA 198 (218)
T ss_dssp CCSCHHHHHHHHHHHH-TTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGS
T ss_pred CcCCHHHHHHHHHHhC-CCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhc
Confidence 1113344555555442 46999999999 58999999999999999999884
No 212
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.02 E-value=1.8e-05 Score=87.15 Aligned_cols=183 Identities=16% Similarity=0.060 Sum_probs=108.4
Q ss_pred CHHHHHHHHHhcCCCcceEEcCCCceEEEEee---cccccccCCCCCCcccCCceEEeEeeccc-------hhHHHHHHH
Q psy1056 268 SLEEANVILEKSKKGKLPILNDKGELIALIAR---TDLKKSRDYPDSSKDENNQLIVGAAIGTR-------EADKNRLKL 337 (590)
Q Consensus 268 ~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~---~dll~~~~~~~~~~d~~~~l~v~a~i~~~-------~~~~e~~~~ 337 (590)
...+..+.+.+.+...+-++|=++..-|-..+ .++++..... ..-.+.++..+... .+..+.++.
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~-----~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~ 355 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKT-----VFVPLTVGGGIKDIVDVDGTKIPALEVASL 355 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTT-----CCSCEEEESSCSCEECTTCCEECHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhh-----CCCcEEEeCccccchhcccccchHHHHHHH
Confidence 34566777888899999998743321111011 1223322211 12234444444322 236688999
Q ss_pred HHHcCCcEEEEecCCCc----------hhhHHHHHHHHHHhCCC-ceEE---ecc-------------------------
Q psy1056 338 LSQAGVDVVILDSSQGN----------SIYQIEMIKFIKKEYPD-MQVI---GGN------------------------- 378 (590)
Q Consensus 338 li~~gad~i~V~~~~G~----------~~~~l~~i~~i~~~~~~-vpvi---~g~------------------------- 378 (590)
++++|++.+.|++.--. ...-.+.++.+.+.|++ .-++ ++.
T Consensus 356 ~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (555)
T 1jvn_A 356 YFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEK 435 (555)
T ss_dssp HHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCC
T ss_pred HHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCc
Confidence 99999999999764200 00013567777776642 1222 221
Q ss_pred ----------------ccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCH
Q psy1056 379 ----------------VLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSV 442 (590)
Q Consensus 379 ----------------v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~ 442 (590)
+...+.++++.++|++.|.+ +.+.++|.. -|...+.+.++.+ ..++||||+|||.++
T Consensus 436 ~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~---t~~~~dG~~-~G~d~~li~~l~~---~~~iPVIasGGi~s~ 508 (555)
T 1jvn_A 436 YCWYQCTIKGGRESRDLGVWELTRACEALGAGEILL---NCIDKDGSN-SGYDLELIEHVKD---AVKIPVIASSGAGVP 508 (555)
T ss_dssp EEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEE---CCGGGTTTC-SCCCHHHHHHHHH---HCSSCEEECSCCCSH
T ss_pred ceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEE---eCCCCCCCC-CCCCHHHHHHHHH---hCCccEEEECCCCCH
Confidence 11347889999999999943 333211110 1233334444443 356999999999999
Q ss_pred HHHHHHHH-cCCCEEEECccc
Q psy1056 443 GHVMKALA-LGASTAMMGSLL 462 (590)
Q Consensus 443 ~di~kala-lGA~~v~~g~~l 462 (590)
.|+.+++. .||++|++|+.|
T Consensus 509 ~d~~~~~~~~G~~gvivg~a~ 529 (555)
T 1jvn_A 509 EHFEEAFLKTRADACLGAGMF 529 (555)
T ss_dssp HHHHHHHHHSCCSEEEESHHH
T ss_pred HHHHHHHHhcCChHHHHHHHH
Confidence 99999998 899999999988
No 213
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.02 E-value=2.4e-06 Score=86.72 Aligned_cols=126 Identities=14% Similarity=0.049 Sum_probs=77.2
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc--
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM-- 409 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~-- 409 (590)
.+.++.+.++|++.+....... . .+.++.+++...++++++ ++.+++.+..+.++|+|+|-+....+.. +-+
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~-~---~~~~~~~~~~~~~i~l~~-~v~~~~~~~~a~~~Gad~I~v~G~~~~g-~~~e~ 163 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLT-P---ADEEHHIDKWKFKVPFVC-GARNLGEALRRIAEGAAMIRTKGEAGTG-NVVEA 163 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSC-C---SCSSCCCCGGGCSSCEEE-EESSHHHHHHHHHTTCSEEEECCCSSSC-CTHHH
T ss_pred HHHHHHHHHCCCCEEeeeCCCC-h---HHHHHHHHHhCCCceEEe-ecCCHHHHHHHHHcCCCEEEEcccccCc-chHHH
Confidence 5677888899999993322111 1 112223333233677765 4778999999999999998443100000 000
Q ss_pred c------------ccccc-h----------hHHHHHHHHHhcCCCcEE--ecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 410 Q------------VIGRN-G----------TAVYRVAEYASRRGVPVI--ADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 410 ~------------~~g~~-~----------~~l~~~~~~~~~~~v~ii--a~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
. -.|++ . ..+..+++.....++|+| ++|||+|+.|+.+++.+|||+|++|+.+.
T Consensus 164 ~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~ 242 (297)
T 2zbt_A 164 VRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIF 242 (297)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGG
T ss_pred HhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHh
Confidence 0 00110 0 012223333333468988 99999999999999999999999999884
No 214
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.01 E-value=0.00012 Score=72.64 Aligned_cols=121 Identities=15% Similarity=0.106 Sum_probs=84.6
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCCC--ceEEeccc-cCcHH----HHHHHHCCCCEEEEcc
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYPD--MQVIGGNV-LFGYQ----PRATLLNFIYQIEMIK 400 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~~--vpvi~g~v-~s~~~----a~~l~~~Gvd~i~v~~ 400 (590)
..++..++.|++-|-+... .|+...+.+.|..+++..++ +.+|+-.. .+.++ ++.+.++|+|+|+.|
T Consensus 130 ~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS- 208 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTS- 208 (288)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC-
T ss_pred HHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcC-
Confidence 3677788899998765443 35666778888888887532 45554322 25555 566778999999433
Q ss_pred cccccCCCccccccchhHHHHHHHHHh--cCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYAS--RRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~--~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
+ ||...|.|+..+...++..+ ..+++|.++||||+..|+.+.+.+||+.+...+
T Consensus 209 -T-----Gf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 209 -T-----GFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp -C-----SSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred -C-----CCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 1 13333446666666666654 346999999999999999999999999875543
No 215
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.99 E-value=6.4e-05 Score=77.49 Aligned_cols=131 Identities=16% Similarity=0.064 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--------------------c----hhhHHHHHHHHHHhCC-CceEEecccc----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--------------------N----SIYQIEMIKFIKKEYP-DMQVIGGNVL---- 380 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--------------------~----~~~~l~~i~~i~~~~~-~vpvi~g~v~---- 380 (590)
+..+.+..+.++|.|.|.|+.++| . .++.++.++.+++..+ +.||.++=-.
T Consensus 144 ~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~ 223 (343)
T 3kru_A 144 AFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYM 223 (343)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSS
T ss_pred HHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhh
Confidence 445567778889999999995432 1 1345788999999885 5688764211
Q ss_pred ----C----cHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC
Q psy1056 381 ----F----GYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG 452 (590)
Q Consensus 381 ----s----~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG 452 (590)
+ .+-++.|.++ +|+|.++...+........-|+.......+++. .++|||+.|||.++.++.++|+.|
T Consensus 224 ~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~---~~iPVi~~Ggi~t~e~Ae~~l~~G 299 (343)
T 3kru_A 224 EGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR---CNIKTSAVGLITTQELAEEILSNE 299 (343)
T ss_dssp TTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH---HTCEEEEESSCCCHHHHHHHHHTT
T ss_pred ccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh---cCcccceeeeeeHHHHHHHHHhch
Confidence 2 3446677779 999987432221100000112222223334433 359999999999999999999999
Q ss_pred -CCEEEECccccC
Q psy1056 453 -ASTAMMGSLLAG 464 (590)
Q Consensus 453 -A~~v~~g~~l~~ 464 (590)
||+|++|++|..
T Consensus 300 ~aD~V~iGR~~la 312 (343)
T 3kru_A 300 RADLVALGRELLR 312 (343)
T ss_dssp SCSEEEESHHHHH
T ss_pred hhHHHHHHHHHhc
Confidence 999999998853
No 216
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.98 E-value=6.3e-05 Score=79.64 Aligned_cols=133 Identities=16% Similarity=0.080 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC--------------------Cch-----hhHHHHHHHHHHhC-----CCceEEecc-
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ--------------------GNS-----IYQIEMIKFIKKEY-----PDMQVIGGN- 378 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~--------------------G~~-----~~~l~~i~~i~~~~-----~~vpvi~g~- 378 (590)
+..+.+....++|.|.|.|+.++ |.. ++.++.++.+++.. ++.||.++=
T Consensus 171 ~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis 250 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRAT 250 (419)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecc
Confidence 34456777889999999999754 211 34567888888765 356777541
Q ss_pred ---------ccC----cHHHHHHHH-CCCCEEEEccccccc---CCCccccccchhHHHHHHHHHhcCCCcEEecCCCCC
Q psy1056 379 ---------VLF----GYQPRATLL-NFIYQIEMIKFIKKE---YPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQS 441 (590)
Q Consensus 379 ---------v~s----~~~a~~l~~-~Gvd~i~v~~~~~~~---~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~ 441 (590)
..+ .+-++.|.+ +|+|+|.|+..+... .....+.+........+++... .++|||+.|||++
T Consensus 251 ~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~-~~iPVI~~GgI~t 329 (419)
T 3l5a_A 251 PEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA-GRIPLIASGGINS 329 (419)
T ss_dssp SCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT-TSSCEEECSSCCS
T ss_pred cccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC-CCCeEEEECCCCC
Confidence 112 345677888 999999885432100 0001111112223334554432 1499999999999
Q ss_pred HHHHHHHHHcCCCEEEECccccC
Q psy1056 442 VGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 442 ~~di~kalalGA~~v~~g~~l~~ 464 (590)
+.++.++|+. ||+|++|++|..
T Consensus 330 ~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 330 PESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp HHHHHHHGGG-CSEEEESTHHHH
T ss_pred HHHHHHHHHh-CCcHHHHHHHHH
Confidence 9999999999 999999998854
No 217
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.97 E-value=2.6e-05 Score=81.53 Aligned_cols=128 Identities=11% Similarity=0.010 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCCCceEEeccc------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYPDMQVIGGNV------ 379 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~~vpvi~g~v------ 379 (590)
+..+.++.+.++|+|.|.|+.++|+ .+..++.++.+++..+.-||.++=-
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 4455677778899999999876531 1235788899998875237776511
Q ss_pred -----c----CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 380 -----L----FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 380 -----~----s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
. ..+-++.|.++|+|+|.++..+... ...+ .....+..+++ ..++|||+.||| ++.++.++|+
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--~~~~--~~~~~~~~ik~---~~~iPvi~~Ggi-~~~~a~~~l~ 318 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIG--GDIT--YPEGFREQMRQ---RFKGGLIYCGNY-DAGRAQARLD 318 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------C--CCTTHHHHHHH---HCCSEEEEESSC-CHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccC--CCCc--chHHHHHHHHH---HCCCCEEEECCC-CHHHHHHHHH
Confidence 1 2233788889999999774322111 0000 01222333443 346999999999 7999999999
Q ss_pred cC-CCEEEECccccCC
Q psy1056 451 LG-ASTAMMGSLLAGT 465 (590)
Q Consensus 451 lG-A~~v~~g~~l~~~ 465 (590)
.| ||+|++|+.+..-
T Consensus 319 ~g~aD~V~igR~~l~~ 334 (377)
T 2r14_A 319 DNTADAVAFGRPFIAN 334 (377)
T ss_dssp TTSCSEEEESHHHHHC
T ss_pred CCCceEEeecHHHHhC
Confidence 98 9999999988643
No 218
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=97.95 E-value=4.2e-05 Score=77.75 Aligned_cols=134 Identities=14% Similarity=0.120 Sum_probs=82.4
Q ss_pred HHHHHHHHHHcCCcEEEEec--------CCCc-hhhHHHHHHHHHHhCCCceEEeccc-cCcHHHHHHHHCCCCEEEEcc
Q psy1056 331 DKNRLKLLSQAGVDVVILDS--------SQGN-SIYQIEMIKFIKKEYPDMQVIGGNV-LFGYQPRATLLNFIYQIEMIK 400 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~--------~~G~-~~~~l~~i~~i~~~~~~vpvi~g~v-~s~~~a~~l~~~Gvd~i~v~~ 400 (590)
..+.++.+.++|++.+++.. ..|. .....+.++.+++.. ++|++++.- +..+.++.+.++|||+|..+.
T Consensus 30 ~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~-~iPv~~k~r~g~~~~~~~~~a~GAd~V~~~~ 108 (305)
T 2nv1_A 30 NAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV-SIPVMAKARIGHIVEARVLEAMGVDYIDESE 108 (305)
T ss_dssp SHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC-SSCEEEEECTTCHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC-CCCEEecccccchHHHHHHHHCCCCEEEEec
Confidence 35778888899999994322 1121 111356777788777 789886542 236777788888888885310
Q ss_pred c----ccccC-C------------------------C-----cccc------------------------cc---ch---
Q psy1056 401 F----IKKEY-P------------------------D-----MQVI------------------------GR---NG--- 416 (590)
Q Consensus 401 ~----~~~~~-~------------------------~-----~~~~------------------------g~---~~--- 416 (590)
. ..+.. . | +.|| |+ ..
T Consensus 109 ~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~ 188 (305)
T 2nv1_A 109 VLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTE 188 (305)
T ss_dssp TSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHH
T ss_pred cCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcc
Confidence 0 00000 0 0 0011 00 00
Q ss_pred -----hHHHHHHHHHhcCCCcEE--ecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 417 -----TAVYRVAEYASRRGVPVI--ADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 417 -----~~l~~~~~~~~~~~v~ii--a~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
..+..+.+.....++|++ +.|||+|+.|+.+++.+|||+|++|+.|...
T Consensus 189 ~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~ 244 (305)
T 2nv1_A 189 AKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS 244 (305)
T ss_dssp HHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS
T ss_pred cccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC
Confidence 011223333333468999 9999999999999999999999999998643
No 219
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=97.95 E-value=4.2e-05 Score=76.03 Aligned_cols=123 Identities=19% Similarity=0.122 Sum_probs=76.8
Q ss_pred HHHHHHHc-CCcEEEEecCCCch---hhHHHHHHHHHHhC-CCceEEeccccCcHHHHHHHHCCCCEEEEcc-cccccCC
Q psy1056 334 RLKLLSQA-GVDVVILDSSQGNS---IYQIEMIKFIKKEY-PDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-FIKKEYP 407 (590)
Q Consensus 334 ~~~~li~~-gad~i~V~~~~G~~---~~~l~~i~~i~~~~-~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-~~~~~~~ 407 (590)
.++.+.++ +.+.+.++..-..+ ....+.++..++.+ ++..++.-.+.+.+.++++.++|+|+| ++. ..+-
T Consensus 84 f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v-~~~~~~~G--- 159 (264)
T 1xm3_A 84 IARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAI-MPGASPIG--- 159 (264)
T ss_dssp HHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCB-EECSSSTT---
T ss_pred HHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEE-EECCcccC---
Confidence 45555565 45666554322111 22234444444432 234444334557889999999999998 321 1000
Q ss_pred Ccccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 408 DMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 408 ~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
++.+. +...+..+++ ..++|+++.|||+++.|+.+++++|||+|.+|+.|..+
T Consensus 160 --t~~~~~~~~~l~~i~~---~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~a 213 (264)
T 1xm3_A 160 --SGQGILNPLNLSFIIE---QAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGA 213 (264)
T ss_dssp --CCCCCSCHHHHHHHHH---HCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred --CCCCCCCHHHHHHHHh---cCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhCC
Confidence 11233 4444545544 34699999999999999999999999999999998654
No 220
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.95 E-value=4.9e-05 Score=74.48 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=73.4
Q ss_pred HHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc-cccccCCCccccccch
Q psy1056 338 LSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-FIKKEYPDMQVIGRNG 416 (590)
Q Consensus 338 li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-~~~~~~~~~~~~g~~~ 416 (590)
..+.|+|.+++....-. ...+++.++.-.++--.+.|.++++++.+.|+|+|-++. ..+..+++.... .
T Consensus 108 A~~~gAdGVHLg~~dl~-------~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~--g- 177 (243)
T 3o63_A 108 ARAAGADVLHLGQRDLP-------VNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAP--G- 177 (243)
T ss_dssp HHHHTCSEEEECTTSSC-------HHHHHHHSCTTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCCCC-----CC--C-
T ss_pred HHHhCCCEEEecCCcCC-------HHHHHHhhCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchh--h-
Confidence 44568888877433221 233445443333444477899999999999999997632 222221111111 2
Q ss_pred hHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 417 TAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 417 ~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
+..++.++.. .++|++|.||| |+.++..+++.||++|.+|+.|..+
T Consensus 178 --l~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a 225 (243)
T 3o63_A 178 --LGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSA 225 (243)
T ss_dssp --HHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTC
T ss_pred --HHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 2233333332 36999999999 9999999999999999999988654
No 221
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.92 E-value=3e-05 Score=75.13 Aligned_cols=110 Identities=14% Similarity=0.152 Sum_probs=80.0
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
.+.++..+++|+++++. ++ .. .+.++..++. ++|++.| +.|+.++.++.++|+|++++-+... . |
T Consensus 96 ~~~a~~Ai~AGA~fIvs--P~-~~---~~vi~~~~~~--gi~~ipG-v~TptEi~~A~~~Gad~vK~FPa~~-----~-g 160 (232)
T 4e38_A 96 GEQALAAKEAGATFVVS--PG-FN---PNTVRACQEI--GIDIVPG-VNNPSTVEAALEMGLTTLKFFPAEA-----S-G 160 (232)
T ss_dssp HHHHHHHHHHTCSEEEC--SS-CC---HHHHHHHHHH--TCEEECE-ECSHHHHHHHHHTTCCEEEECSTTT-----T-T
T ss_pred HHHHHHHHHcCCCEEEe--CC-CC---HHHHHHHHHc--CCCEEcC-CCCHHHHHHHHHcCCCEEEECcCcc-----c-c
Confidence 57788899999999973 32 22 4556666665 7898884 8899999999999999996622111 0 0
Q ss_pred cccchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 412 IGRNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 412 ~g~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
| +.-+ ....... ++|+++.||| ++..+...|++||.+++.|+.+.
T Consensus 161 -G--~~~l---kal~~p~p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 161 -G--ISMV---KSLVGPYGDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp -H--HHHH---HHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGGG
T ss_pred -C--HHHH---HHHHHHhcCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchhc
Confidence 1 1222 3232222 5999999999 58999999999999999999885
No 222
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.92 E-value=5e-05 Score=79.42 Aligned_cols=128 Identities=14% Similarity=0.058 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCCCceEEecccc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYPDMQVIGGNVL----- 380 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~~vpvi~g~v~----- 380 (590)
+..+.++.+.++|.|.|.|+.++|+ .+..++.++.+++..++-||.++--.
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 4456777888999999999986542 12357888999988752277754211
Q ss_pred ----------CcHHHHHHHHCCCCEEEEcccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHH
Q psy1056 381 ----------FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKAL 449 (590)
Q Consensus 381 ----------s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kal 449 (590)
..+-++.|.++|+|+|.++..+... ... +. ....+..+++ ..++|||+.||| ++.++.++|
T Consensus 248 g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~--~~~--~~~~~~~~~~vr~---~~~iPvi~~G~i-~~~~a~~~l 319 (376)
T 1icp_A 248 EAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKT--AWE--KIECTESLVPMRK---AYKGTFIVAGGY-DREDGNRAL 319 (376)
T ss_dssp TCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC----------CCCCSHHHHH---HCCSCEEEESSC-CHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC--CCC--ccccHHHHHHHHH---HcCCCEEEeCCC-CHHHHHHHH
Confidence 1345677888999999774322111 000 11 1112233443 346899999999 999999999
Q ss_pred HcC-CCEEEECccccCC
Q psy1056 450 ALG-ASTAMMGSLLAGT 465 (590)
Q Consensus 450 alG-A~~v~~g~~l~~~ 465 (590)
+.| ||+|++|++|..-
T Consensus 320 ~~g~aD~V~~gR~~l~~ 336 (376)
T 1icp_A 320 IEDRADLVAYGRLFISN 336 (376)
T ss_dssp HTTSCSEEEESHHHHHC
T ss_pred HCCCCcEEeecHHHHhC
Confidence 998 9999999988643
No 223
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.88 E-value=1.7e-05 Score=77.68 Aligned_cols=176 Identities=13% Similarity=0.080 Sum_probs=96.5
Q ss_pred CHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEEE
Q psy1056 268 SLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVVI 347 (590)
Q Consensus 268 ~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i~ 347 (590)
...+..+.+.+.+.+.+-+.|.+..--+--...++++... ...-.+.+...+ ...+.++.+++.|++.++
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~------~~~ipvi~~Ggi----~~~~~~~~~~~~Gad~V~ 100 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS------EFAEHIQIGGGI----RSLDYAEKLRKLGYRRQI 100 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG------GGGGGEEEESSC----CSHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH------hcCCcEEEECCC----CCHHHHHHHHHCCCCEEE
Confidence 4566777788888888877653210000000111122111 011223332222 223456667788999988
Q ss_pred EecCC-CchhhHHHHHHHHHHhCCCceEEeccc---------------cC-cHHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 348 LDSSQ-GNSIYQIEMIKFIKKEYPDMQVIGGNV---------------LF-GYQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 348 V~~~~-G~~~~~l~~i~~i~~~~~~vpvi~g~v---------------~s-~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
+-... .++ +.+..+ +.+++..++.-.+ .+ .+-++++.++|+++|.+ +.+..++ .
T Consensus 101 lg~~~l~~p----~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~---t~~~~~g-~ 171 (241)
T 1qo2_A 101 VSSKVLEDP----SFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVH---TEIEKDG-T 171 (241)
T ss_dssp ECHHHHHCT----THHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEE---EETTHHH-H
T ss_pred ECchHhhCh----HHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEE---Eeecccc-c
Confidence 74321 111 234555 5553221121122 13 34578899999998844 2221000 0
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHc-----C-CCEEEECccccCC
Q psy1056 411 VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALAL-----G-ASTAMMGSLLAGT 465 (590)
Q Consensus 411 ~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalal-----G-A~~v~~g~~l~~~ 465 (590)
..|...+.+.++++. .++|+|++|||+++.|+.+++.+ | ||+|++|+.|...
T Consensus 172 ~~g~~~~~i~~l~~~---~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~ 229 (241)
T 1qo2_A 172 LQEHDFSLTKKIAIE---AEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG 229 (241)
T ss_dssp TCCCCHHHHHHHHHH---HTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT
T ss_pred CCcCCHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC
Confidence 012233344444443 36999999999999999999999 9 9999999998544
No 224
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.87 E-value=0.00011 Score=76.12 Aligned_cols=121 Identities=18% Similarity=0.152 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCCCceEEecccc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYPDMQVIGGNVL----- 380 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~~vpvi~g~v~----- 380 (590)
+..+.+..+.++|.|.|.|+.++|+ .++.++.++.+++..++-||.++=-.
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~ 241 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAH 241 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccC
Confidence 3445677788999999999976521 13457889999988753377764111
Q ss_pred ----------CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 381 ----------FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 381 ----------s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
..+-++.|.++|+|+|.|+..+ . |. ..+..+++.. ++|||+.||+ ++.++.++|+
T Consensus 242 g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~-------~~--~~~~~ik~~~---~iPvi~~Ggi-t~e~a~~~l~ 306 (361)
T 3gka_A 242 TMGDSDPAATFGHVARELGRRRIAFLFARESF--G-------GD--AIGQQLKAAF---GGPFIVNENF-TLDSAQAALD 306 (361)
T ss_dssp SCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--S-------TT--CCHHHHHHHH---CSCEEEESSC-CHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC--C-------CH--HHHHHHHHHc---CCCEEEeCCC-CHHHHHHHHH
Confidence 1334677888999999774322 1 11 1233444443 5899999999 9999999999
Q ss_pred cC-CCEEEECccccCC
Q psy1056 451 LG-ASTAMMGSLLAGT 465 (590)
Q Consensus 451 lG-A~~v~~g~~l~~~ 465 (590)
.| ||+|++|++|..-
T Consensus 307 ~G~aD~V~iGR~~lad 322 (361)
T 3gka_A 307 AGQADAVAWGKLFIAN 322 (361)
T ss_dssp TTSCSEEEESHHHHHC
T ss_pred cCCccEEEECHHhHhC
Confidence 98 9999999988543
No 225
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.87 E-value=0.00012 Score=75.93 Aligned_cols=121 Identities=19% Similarity=0.098 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCCCceEEecccc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYPDMQVIGGNVL----- 380 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~~vpvi~g~v~----- 380 (590)
+..+.+..+.++|.|.|.|+.++|+ .++.++.++.+++.++.-||.++--.
T Consensus 154 ~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~ 233 (362)
T 4ab4_A 154 AYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAH 233 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSS
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccccc
Confidence 3445677788899999999976521 13457888999988753377754211
Q ss_pred ----------CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 381 ----------FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 381 ----------s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
..+-++.|.++|+|+|.|+..+ . |. ..+..+++.. ++|||+.||+ ++.++.++|+
T Consensus 234 g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~-------~~--~~~~~ik~~~---~iPvi~~Ggi-t~e~a~~~l~ 298 (362)
T 4ab4_A 234 DMGDADRAETFTYVARELGKRGIAFICSRERE--A-------DD--SIGPLIKEAF---GGPYIVNERF-DKASANAALA 298 (362)
T ss_dssp SCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC--C-------TT--CCHHHHHHHH---CSCEEEESSC-CHHHHHHHHH
T ss_pred ccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC--C-------CH--HHHHHHHHHC---CCCEEEeCCC-CHHHHHHHHH
Confidence 1233678888999999775322 1 11 1233444443 5899999999 9999999999
Q ss_pred cC-CCEEEECccccCC
Q psy1056 451 LG-ASTAMMGSLLAGT 465 (590)
Q Consensus 451 lG-A~~v~~g~~l~~~ 465 (590)
.| ||+|++|+++..-
T Consensus 299 ~g~aD~V~iGR~~lan 314 (362)
T 4ab4_A 299 SGKADAVAFGVPFIAN 314 (362)
T ss_dssp TTSCSEEEESHHHHHC
T ss_pred cCCccEEEECHHhHhC
Confidence 98 9999999988543
No 226
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.86 E-value=0.00011 Score=70.73 Aligned_cols=181 Identities=17% Similarity=0.123 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHhcCCCcceEEcCCCceEEEEee-cccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcE
Q psy1056 267 ISLEEANVILEKSKKGKLPILNDKGELIALIAR-TDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDV 345 (590)
Q Consensus 267 ~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~-~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~ 345 (590)
.++.++++.+.+.+.+.+=+..-+|.+...++. -++++...... ...+.+..-+.... +.++.+.+.|++.
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~-----~~~~~v~l~v~d~~---~~i~~~~~~gad~ 87 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS-----KLVFDCHLMVVDPE---RYVEAFAQAGADI 87 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-----CSEEEEEEESSSGG---GGHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC-----CCCEEEEEeecCHH---HHHHHHHHcCCCE
Confidence 567888899988888775443323443333332 23333222110 11233333333221 2347778899999
Q ss_pred EEEecCCCchhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEE-cccccccCCCcccc--cc-chhHHH
Q psy1056 346 VILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEM-IKFIKKEYPDMQVI--GR-NGTAVY 420 (590)
Q Consensus 346 i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~--g~-~~~~l~ 420 (590)
++++...+. .....++.+++. +.++++. +..+..+..+....++|+|.+ +...+ ++|. ++ ....+.
T Consensus 88 v~vh~~~~~--~~~~~~~~~~~~--g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g-----~~g~~~~~~~~~~i~ 158 (220)
T 2fli_A 88 MTIHTESTR--HIHGALQKIKAA--GMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPG-----FGGQAFIPECLEKVA 158 (220)
T ss_dssp EEEEGGGCS--CHHHHHHHHHHT--TSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTT-----CSSCCCCGGGHHHHH
T ss_pred EEEccCccc--cHHHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCC-----CcccccCHHHHHHHH
Confidence 999876552 234555666554 4444331 224554444444567998843 22211 2221 22 222344
Q ss_pred HHHHHHhcC--CCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 421 RVAEYASRR--GVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 421 ~~~~~~~~~--~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
.+++.+... ++|++++|||+ +.++.+++.+|||++.+|+.+...
T Consensus 159 ~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 159 TVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp HHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred HHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 455544322 58999999998 889999999999999999998543
No 227
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.86 E-value=8.9e-05 Score=72.05 Aligned_cols=122 Identities=14% Similarity=0.091 Sum_probs=80.4
Q ss_pred HHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccccc
Q psy1056 335 LKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGR 414 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~ 414 (590)
+......|+|++.+-.+-=.... +..+..+...+ ++.+++ +|-+.++..++.++|++.|-| +.|. +..+-.
T Consensus 119 I~eAr~~GADaILLI~a~L~~~~-l~~l~~~A~~l-Gl~~Lv-EVh~~~El~rAl~~~a~iIGI---NNRn---L~tf~v 189 (258)
T 4a29_A 119 IDDAYNLGADTVLLIVKILTERE-LESLLEYARSY-GMEPLI-LINDENDLDIALRIGARFIGI---MSRD---FETGEI 189 (258)
T ss_dssp HHHHHHHTCSEEEEEGGGSCHHH-HHHHHHHHHHT-TCCCEE-EESSHHHHHHHHHTTCSEEEE---CSBC---TTTCCB
T ss_pred HHHHHHcCCCeeehHHhhcCHHH-HHHHHHHHHHH-hHHHHH-hcchHHHHHHHhcCCCcEEEE---eCCC---cccccc
Confidence 34455679999876554322222 33333444444 565555 999999999999999998833 3343 222222
Q ss_pred chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCCC
Q psy1056 415 NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGTS 466 (590)
Q Consensus 415 ~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~~ 466 (590)
.......++.... .++.+|+.+||+++.|+.+....|++++.+|..|+.+.
T Consensus 190 dl~~t~~L~~~ip-~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~ 240 (258)
T 4a29_A 190 NKENQRKLISMIP-SNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNP 240 (258)
T ss_dssp CHHHHHHHHTTSC-TTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCT
T ss_pred CHHHHHHHHhhCC-CCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCC
Confidence 2222223333222 25889999999999999999999999999999997543
No 228
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.84 E-value=7.4e-05 Score=74.41 Aligned_cols=130 Identities=14% Similarity=0.029 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc--------------------h-hhHHHHHHHHHHhCCCceEEe---cc-c---cC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN--------------------S-IYQIEMIKFIKKEYPDMQVIG---GN-V---LF 381 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~--------------------~-~~~l~~i~~i~~~~~~vpvi~---g~-v---~s 381 (590)
...+.++.+.++ +|++.+..+..+ + ..+++.++.+++. +++|+++ -| + +.
T Consensus 31 ~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~~~Pii~m~y~n~v~~~g~ 108 (271)
T 1ujp_A 31 GFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-TEKPLFLMTYLNPVLAWGP 108 (271)
T ss_dssp HHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CCSCEEEECCHHHHHHHCH
T ss_pred HHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHhhH
Confidence 345677778888 999998764322 1 3356789999988 4789886 13 2 23
Q ss_pred cHHHHHHHHCCCCEEEE---c-----------------------cccccc--------CCCcc------c-ccc-c--hh
Q psy1056 382 GYQPRATLLNFIYQIEM---I-----------------------KFIKKE--------YPDMQ------V-IGR-N--GT 417 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v---~-----------------------~~~~~~--------~~~~~------~-~g~-~--~~ 417 (590)
...++.+.++|+|++.+ . .+++.. ..||. | .|. + ..
T Consensus 109 ~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~ 188 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPE 188 (271)
T ss_dssp HHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC------------
T ss_pred HHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCc
Confidence 55677899999998865 0 111100 00111 0 121 1 11
Q ss_pred HH-HHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 418 AV-YRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 418 ~l-~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.+ ..+.+..+..++|+++.|||+|+.++.++ .|||+|++|+.|.
T Consensus 189 ~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~ 233 (271)
T 1ujp_A 189 EVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGSALV 233 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHH
T ss_pred cHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHh
Confidence 11 12333333347999999999999999985 9999999999984
No 229
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.82 E-value=0.00014 Score=82.15 Aligned_cols=134 Identities=14% Similarity=0.109 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCC-CceEEec----c--
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYP-DMQVIGG----N-- 378 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~-~vpvi~g----~-- 378 (590)
...+.+..+.++|.|.+.++.++|+ .+...+.++.+++..+ +.|+.++ +
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 3445677788999999999876532 1335788889998773 6787652 1
Q ss_pred --ccCc----HHHHHHHHCCCCEEEEcccccccC-CCcc-ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 379 --VLFG----YQPRATLLNFIYQIEMIKFIKKEY-PDMQ-VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 379 --v~s~----~~a~~l~~~Gvd~i~v~~~~~~~~-~~~~-~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
..+. +-++.|.++|+|+|.++..+.... +... ..+ ....+..+....+..++|||+.|||.++.++.++++
T Consensus 222 ~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~ 300 (671)
T 1ps9_A 222 EDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVP-RGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILS 300 (671)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSC-TTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCC-cchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHH
Confidence 1233 446778889999998753221110 0000 001 111122233333445799999999999999999999
Q ss_pred cC-CCEEEECccccC
Q psy1056 451 LG-ASTAMMGSLLAG 464 (590)
Q Consensus 451 lG-A~~v~~g~~l~~ 464 (590)
.| ||+|++|++|..
T Consensus 301 ~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 301 RGDADMVSMARPFLA 315 (671)
T ss_dssp TTSCSEEEESTHHHH
T ss_pred cCCCCEEEeCHHHHh
Confidence 99 999999998864
No 230
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.82 E-value=0.00014 Score=76.65 Aligned_cols=134 Identities=13% Similarity=0.068 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--------------------c----hhhHHHHHHHHHHhCCCceEEeccc------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--------------------N----SIYQIEMIKFIKKEYPDMQVIGGNV------ 379 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--------------------~----~~~~l~~i~~i~~~~~~vpvi~g~v------ 379 (590)
...+.+..+.++|.|.|.|+.++| . .+..++.++.+++..++.||.++=-
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 445567788899999999997542 1 1335788899998875347776511
Q ss_pred --c-------CcHHHHHHHHCC------CCEEEEcccccccCCCcccccc--ch-hHHHHHHHHHhcCCCcEEecCCCCC
Q psy1056 380 --L-------FGYQPRATLLNF------IYQIEMIKFIKKEYPDMQVIGR--NG-TAVYRVAEYASRRGVPVIADGGVQS 441 (590)
Q Consensus 380 --~-------s~~~a~~l~~~G------vd~i~v~~~~~~~~~~~~~~g~--~~-~~l~~~~~~~~~~~v~iia~GGi~~ 441 (590)
. ..+-++.|.++| +|+|.|+..+.... ....... .. ..+..+....+..++|||+.||| +
T Consensus 252 g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~ 329 (402)
T 2hsa_B 252 DAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAY-GQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-T 329 (402)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTT-TTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-C
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccc-cCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-C
Confidence 0 234567888899 99998743221100 0000000 01 11122223333457999999999 9
Q ss_pred HHHHHHHHHcC-CCEEEECccccCC
Q psy1056 442 VGHVMKALALG-ASTAMMGSLLAGT 465 (590)
Q Consensus 442 ~~di~kalalG-A~~v~~g~~l~~~ 465 (590)
+.++.++|+.| ||+|++|++|..-
T Consensus 330 ~~~a~~~l~~g~aD~V~igR~~l~d 354 (402)
T 2hsa_B 330 RELGIEAVAQGDADLVSYGRLFISN 354 (402)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHCCCCceeeecHHHHhC
Confidence 99999999998 9999999988654
No 231
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.79 E-value=0.00011 Score=73.22 Aligned_cols=118 Identities=13% Similarity=0.072 Sum_probs=73.9
Q ss_pred HHHHHHHHHcCCcEE--EEecCCCchhhHHHHHHH---HHHhCCCceEEeccc---------cCc---HHH-HHHHHCCC
Q psy1056 332 KNRLKLLSQAGVDVV--ILDSSQGNSIYQIEMIKF---IKKEYPDMQVIGGNV---------LFG---YQP-RATLLNFI 393 (590)
Q Consensus 332 ~e~~~~li~~gad~i--~V~~~~G~~~~~l~~i~~---i~~~~~~vpvi~g~v---------~s~---~~a-~~l~~~Gv 393 (590)
.+.++..++.|++.+ .+..........++.++. +.+.+ ++|+++... .+. +.+ +.+.++|+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~-g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Ga 180 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYW-GMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGA 180 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHH-TCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHc-CCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCC
Confidence 455677888999999 544433333323333333 22334 677776420 233 344 77889999
Q ss_pred CEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCC--HHH----HHHHHHcCCCEEEECccccCC
Q psy1056 394 YQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQS--VGH----VMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 394 d~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~--~~d----i~kalalGA~~v~~g~~l~~~ 465 (590)
|+|.++.. . ....+.++. ...++|+++.|||.+ ..| +.+++..||++|.+|+.+...
T Consensus 181 d~i~~~~~---~---------~~~~l~~i~---~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~ 243 (273)
T 2qjg_A 181 DIVKTSYT---G---------DIDSFRDVV---KGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQH 243 (273)
T ss_dssp SEEEECCC---S---------SHHHHHHHH---HHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTS
T ss_pred CEEEECCC---C---------CHHHHHHHH---HhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCC
Confidence 99955421 1 222333333 334699999999995 667 777778999999999988543
No 232
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.79 E-value=0.00018 Score=68.67 Aligned_cols=106 Identities=25% Similarity=0.254 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
++..+.++.+++.|++.+.+..... ...+.++.+++ ++..+.+|.+.+.++++.++++|+|++ +....
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~k~~---~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GAd~v----~~~~~--- 92 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITLRTE---KGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAAFL----VSPGL--- 92 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEECSST---HHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTCSEE----EESSC---
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCh---HHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCCCEE----EcCCC---
Confidence 3567889999999999999876433 23567777777 688888999889999999999999999 22211
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
. .++.+.+...++|+|. |+.|+.++.+|+.+|||++.+
T Consensus 93 ------d----~~v~~~~~~~g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 93 ------L----EEVAALAQARGVPYLP--GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp ------C----HHHHHHHHHHTCCEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred ------C----HHHHHHHHHhCCCEEe--cCCCHHHHHHHHHCCCCEEEE
Confidence 1 1344444445789998 699999999999999999977
No 233
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.77 E-value=3.3e-05 Score=98.77 Aligned_cols=132 Identities=12% Similarity=0.095 Sum_probs=86.5
Q ss_pred HHHHHHHHcC--CcEEEEecCCCch--hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCC------EEEEcccc
Q psy1056 333 NRLKLLSQAG--VDVVILDSSQGNS--IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIY------QIEMIKFI 402 (590)
Q Consensus 333 e~~~~li~~g--ad~i~V~~~~G~~--~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd------~i~v~~~~ 402 (590)
+.++.+++.| ++.+.+.. |.+ +...+.++.+++. ++.+|.=-+.|.+.++++.++|+| +|.+.
T Consensus 505 ~~~~~~~~~g~~vdgv~~~a--G~P~~ee~~~~i~~l~~~--Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~--- 577 (3089)
T 3zen_D 505 RLVQRARQSGAPIDGLVVSA--GIPDLEEAVDIIDELNEV--GISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIE--- 577 (3089)
T ss_dssp HHHHHHHHTTCSCCEEEEES--SCCCHHHHHHHHTSTTHH--HHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEEC---
T ss_pred HHHHHHHHcCCCceEEEEeC--CCCchhHhHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEe---
Confidence 5677888999 66676643 333 2234555555554 444444367789999999999998 55331
Q ss_pred cccCCCccccccchhHHHHHHHH-HhcCCCcEEecCCCCCHHHHHHHH-----------HcCCCEEEECccccCCCCCCC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEY-ASRRGVPVIADGGVQSVGHVMKAL-----------ALGASTAMMGSLLAGTSEAPG 470 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~-~~~~~v~iia~GGi~~~~di~kal-----------alGA~~v~~g~~l~~~~es~~ 470 (590)
+-...|..++.-+.+.+.+.... ....++|||+.|||.++.+++.+| +||||+|+||++|..|.||..
T Consensus 578 G~eaGGH~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea~~ 657 (3089)
T 3zen_D 578 GGRAGGHHSWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEATT 657 (3089)
T ss_dssp CSSSSEECCSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTSCB
T ss_pred CCCcCCCCCcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcccCC
Confidence 11100111111022223222222 233579999999999999999999 999999999999999999975
Q ss_pred c
Q psy1056 471 E 471 (590)
Q Consensus 471 ~ 471 (590)
+
T Consensus 658 s 658 (3089)
T 3zen_D 658 S 658 (3089)
T ss_dssp C
T ss_pred C
Confidence 5
No 234
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.76 E-value=0.00036 Score=69.44 Aligned_cols=118 Identities=11% Similarity=0.118 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
+..+.+....+.|+..+.|.+..+...+..+.++.+++.. ++|++.++.. +..+...+.++|||+|-+-....
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l----- 146 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAAL----- 146 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGS-----
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEEEecccC-----
Confidence 4567888889999999999988887788888999999887 7999988765 77789999999999994411110
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
....+.++.+.+...++.++. .+.|..++.+|+.+|||.+.++..
T Consensus 147 ------~~~~l~~l~~~a~~lGl~~lv--ev~t~ee~~~A~~~Gad~IGv~~r 191 (272)
T 3qja_A 147 ------EQSVLVSMLDRTESLGMTALV--EVHTEQEADRALKAGAKVIGVNAR 191 (272)
T ss_dssp ------CHHHHHHHHHHHHHTTCEEEE--EESSHHHHHHHHHHTCSEEEEESB
T ss_pred ------CHHHHHHHHHHHHHCCCcEEE--EcCCHHHHHHHHHCCCCEEEECCC
Confidence 222344555666667888887 688999999999999999988753
No 235
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.73 E-value=0.00016 Score=70.92 Aligned_cols=131 Identities=18% Similarity=0.138 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHcCCcEEEEec---CCCchhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEE-------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDS---SQGNSIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEM------- 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~---~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v------- 398 (590)
+..+.++...+.|++-+++-. +...+....+.++.+.+.. .+|+.+| ++.+.++++++.++|||-+.+
T Consensus 32 dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~ 110 (243)
T 4gj1_A 32 NPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKD 110 (243)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEEEccccccC
Confidence 456778888999999887643 2122222357788888877 6888875 445999999999999999977
Q ss_pred ------------------cccccccCCC---cccc-------------------------------cc-chhHHHHHHHH
Q psy1056 399 ------------------IKFIKKEYPD---MQVI-------------------------------GR-NGTAVYRVAEY 425 (590)
Q Consensus 399 ------------------~~~~~~~~~~---~~~~-------------------------------g~-~~~~l~~~~~~ 425 (590)
++......+. ..+| |. +---+..+...
T Consensus 111 p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l 190 (243)
T 4gj1_A 111 ATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLI 190 (243)
T ss_dssp HHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHH
T ss_pred CchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHH
Confidence 1110000000 0011 11 00011112223
Q ss_pred HhcC-CCcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 426 ASRR-GVPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 426 ~~~~-~v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
++.. ++|+|++||+++..|+.+ |.-++++|.+|++|
T Consensus 191 ~~~~~~ipviasGGv~~~~Dl~~-l~~~~~gvivg~Al 227 (243)
T 4gj1_A 191 HEIFPNICIQASGGVASLKDLEN-LKGICSGVIVGKAL 227 (243)
T ss_dssp HHHCTTSEEEEESCCCSHHHHHH-TTTTCSEEEECHHH
T ss_pred HHhcCCCCEEEEcCCCCHHHHHH-HHccCchhehHHHH
Confidence 3333 599999999999999975 56679999999988
No 236
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.72 E-value=0.00016 Score=69.03 Aligned_cols=112 Identities=19% Similarity=0.181 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
.+.++..+++|+++++. ++.+ .+.++..+.. +.+++.| +.|++++.++.++|+|++.+-. ... ..
T Consensus 73 ~d~~~~A~~~GAd~v~~--~~~d----~~v~~~~~~~--g~~~i~G-~~t~~e~~~A~~~Gad~v~~fp--a~~---~g- 137 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVS--PGLL----EEVAALAQAR--GVPYLPG-VLTPTEVERALALGLSALKFFP--AEP---FQ- 137 (207)
T ss_dssp HHHHHHHHHHTCSEEEE--SSCC----HHHHHHHHHH--TCCEEEE-ECSHHHHHHHHHTTCCEEEETT--TTT---TT-
T ss_pred HHHHHHHHHcCCCEEEc--CCCC----HHHHHHHHHh--CCCEEec-CCCHHHHHHHHHCCCCEEEEec--Ccc---cc-
Confidence 36788888999999874 3322 3344445554 6778776 8899999999999999996621 111 00
Q ss_pred cccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 412 IGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 412 ~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
| ++.+..++.... ++|+++.|||. ..++...+++||++|.+|+.+..
T Consensus 138 -G--~~~lk~l~~~~~--~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 138 -G--VRVLRAYAEVFP--EVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp -H--HHHHHHHHHHCT--TCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred -C--HHHHHHHHhhCC--CCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 1 122333333221 69999999995 79999999999999999998853
No 237
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.71 E-value=0.00017 Score=68.93 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=71.4
Q ss_pred HHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc-cccccCCCcccccc
Q psy1056 336 KLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-FIKKEYPDMQVIGR 414 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-~~~~~~~~~~~~g~ 414 (590)
+.+.+.|++.+++....-. .+.++.+ .++..+. -.+.+.+++..+.+.|+|+|.+.. ..+.. -.+...
T Consensus 80 ~~a~~~gad~v~l~~~~~~----~~~~~~~---~~~~~~~-v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~---~~~~~~ 148 (215)
T 1xi3_A 80 DVALAVDADGVQLGPEDMP----IEVAKEI---APNLIIG-ASVYSLEEALEAEKKGADYLGAGSVFPTKT---KEDARV 148 (215)
T ss_dssp HHHHHHTCSEEEECTTSCC----HHHHHHH---CTTSEEE-EEESSHHHHHHHHHHTCSEEEEECSSCC-------CCCC
T ss_pred HHHHHcCCCEEEECCccCC----HHHHHHh---CCCCEEE-EecCCHHHHHHHHhcCCCEEEEcCCccCCC---CCCCCC
Confidence 4567789999987432211 2223333 2233332 256788889889999999996532 22211 111001
Q ss_pred -chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 415 -NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 415 -~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
....+.++++ ..++|++++|||. +.++.+++.+||++|.+|+.+..
T Consensus 149 ~~~~~l~~l~~---~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 149 IGLEGLRKIVE---SVKIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMG 195 (215)
T ss_dssp CHHHHHHHHHH---HCSSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHT
T ss_pred cCHHHHHHHHH---hCCCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhC
Confidence 2223333333 3469999999998 99999999999999999998854
No 238
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.70 E-value=0.00012 Score=70.69 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=71.5
Q ss_pred HHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc-ccccccCCCcccccc
Q psy1056 336 KLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI-KFIKKEYPDMQVIGR 414 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~-~~~~~~~~~~~~~g~ 414 (590)
+.+.+.|++.+++... +.. +..+++.++. .++.-.+.+.++++.+.+.|+|++.++ +..+.. -.+.+.
T Consensus 88 ~~a~~~gad~v~l~~~--~~~-----~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~---~~~~~~ 156 (227)
T 2tps_A 88 ELALNLKADGIHIGQE--DAN-----AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTET---KKDTRA 156 (227)
T ss_dssp HHHHHHTCSEEEECTT--SSC-----HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCS---SSSCCC
T ss_pred HHHHHcCCCEEEECCC--ccC-----HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCC---CCCCCC
Confidence 4566789999987322 111 3444444422 222224568888999999999999652 222221 111111
Q ss_pred --chhHHHHHHHHHhcCC-CcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 415 --NGTAVYRVAEYASRRG-VPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 415 --~~~~l~~~~~~~~~~~-v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
....+.+++ ...+ +|++++|||. +.++.+++.+||++|.+|+.+.
T Consensus 157 ~~~~~~l~~~~---~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~ 204 (227)
T 2tps_A 157 VQGVSLIEAVR---RQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAIS 204 (227)
T ss_dssp CCTTHHHHHHH---HTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHH
T ss_pred ccCHHHHHHHH---HhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhh
Confidence 222333333 3335 9999999998 9999999999999999999884
No 239
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.70 E-value=0.00016 Score=75.58 Aligned_cols=124 Identities=11% Similarity=-0.051 Sum_probs=84.1
Q ss_pred hHHHHHHHHH-HcCCcEEEEecCCC----------------------ch----hhHHHHHHHHHHhCCCceEEec----c
Q psy1056 330 ADKNRLKLLS-QAGVDVVILDSSQG----------------------NS----IYQIEMIKFIKKEYPDMQVIGG----N 378 (590)
Q Consensus 330 ~~~e~~~~li-~~gad~i~V~~~~G----------------------~~----~~~l~~i~~i~~~~~~vpvi~g----~ 378 (590)
+..+.++.+. ++|.|.|.|+.++| .. +..++.++.+++..++-||.++ +
T Consensus 175 ~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~ 254 (379)
T 3aty_A 175 LFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLN 254 (379)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccc
Confidence 3445677788 89999999987543 11 2346788889888753466663 1
Q ss_pred ----c---c----CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHH
Q psy1056 379 ----V---L----FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMK 447 (590)
Q Consensus 379 ----v---~----s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~k 447 (590)
+ . ..+-++.|.++|+|+|.++..+. . .-++... +..+.+..++|||+.||| ++.++.+
T Consensus 255 ~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-~-----~~~~~~~----~~~ir~~~~iPvi~~G~i-t~~~a~~ 323 (379)
T 3aty_A 255 GVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDM-V-----NQQIGDV----VAWVRGSYSGVKISNLRY-DFEEADQ 323 (379)
T ss_dssp CGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCT-T-----SCCCCCH----HHHHHTTCCSCEEEESSC-CHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCc-C-----CCCccHH----HHHHHHHCCCcEEEECCC-CHHHHHH
Confidence 0 1 23446677789999997753221 1 0012112 333334457999999999 9999999
Q ss_pred HHHcC-CCEEEECccccC
Q psy1056 448 ALALG-ASTAMMGSLLAG 464 (590)
Q Consensus 448 alalG-A~~v~~g~~l~~ 464 (590)
+|+.| ||+|++|++|..
T Consensus 324 ~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 324 QIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHTTSCSEEEESHHHHH
T ss_pred HHHcCCCeEEEecHHHHh
Confidence 99998 999999998864
No 240
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.66 E-value=0.00019 Score=70.17 Aligned_cols=143 Identities=14% Similarity=0.067 Sum_probs=90.6
Q ss_pred EEeEeecc--chhHHHHHHHHHHcCCcEEEEecCCCch----hhHHHHHHHHHHhCCCceEEecc-ccCcH-HHHHHHHC
Q psy1056 320 IVGAAIGT--READKNRLKLLSQAGVDVVILDSSQGNS----IYQIEMIKFIKKEYPDMQVIGGN-VLFGY-QPRATLLN 391 (590)
Q Consensus 320 ~v~a~i~~--~~~~~e~~~~li~~gad~i~V~~~~G~~----~~~l~~i~~i~~~~~~vpvi~g~-v~s~~-~a~~l~~~ 391 (590)
.+..++-. ...+.+.++.+.++|++.+++|.-.|+. ..=...++.+|+..|+.|+-+.= +.+++ -++.+.++
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~a 108 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKA 108 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHH
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHc
Confidence 34444432 2345678888889999999999876652 11157888888887667765422 22333 46678899
Q ss_pred CCCEEEEccccc----------ccC---------------------------------CCccccccchhH---HHHHHHH
Q psy1056 392 FIYQIEMIKFIK----------KEY---------------------------------PDMQVIGRNGTA---VYRVAEY 425 (590)
Q Consensus 392 Gvd~i~v~~~~~----------~~~---------------------------------~~~~~~g~~~~~---l~~~~~~ 425 (590)
|+|+|-+-.+.+ +.. +||.|-.+.+.. +.++++.
T Consensus 109 GAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~ 188 (246)
T 3inp_A 109 GATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKW 188 (246)
T ss_dssp TCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHH
Confidence 999998811100 000 022221112333 4444544
Q ss_pred Hhc--CCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 426 ASR--RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 426 ~~~--~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
... .+++|-++|||+ +..+..+..+|||.+++|+.+.
T Consensus 189 ~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 189 ISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIF 227 (246)
T ss_dssp HHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHH
T ss_pred HHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHh
Confidence 432 358899999997 6789999999999999999874
No 241
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.60 E-value=0.00026 Score=68.68 Aligned_cols=134 Identities=17% Similarity=0.126 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch----hhHHHHHHHHHHhC-CCceEEecc-ccCc-HHHHHHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS----IYQIEMIKFIKKEY-PDMQVIGGN-VLFG-YQPRATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~----~~~l~~i~~i~~~~-~~vpvi~g~-v~s~-~~a~~l~~~Gvd~i~v~~~~ 402 (590)
.+.+.++.+.++|++.+++|.-.|+. ..=...++.+++.+ ++.|+-++= +.++ .-.+.+.++|+|+|-+-.+.
T Consensus 18 ~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea 97 (228)
T 3ovp_A 18 NLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEA 97 (228)
T ss_dssp GHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCC
Confidence 45677888889999999998876652 11256788888775 566554321 1222 34677888999999871110
Q ss_pred cc--------------------------cC--------C-----C-cccc-cc--chhHHHHHHHHHhcC-CCcEEecCC
Q psy1056 403 KK--------------------------EY--------P-----D-MQVI-GR--NGTAVYRVAEYASRR-GVPVIADGG 438 (590)
Q Consensus 403 ~~--------------------------~~--------~-----~-~~~~-g~--~~~~l~~~~~~~~~~-~v~iia~GG 438 (590)
+. .. + . ..|+ |. .+..+..+++..... +.++.++||
T Consensus 98 ~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGG 177 (228)
T 3ovp_A 98 TENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGG 177 (228)
T ss_dssp CSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESS
T ss_pred chhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCC
Confidence 00 00 0 0 1122 11 234444444433222 488999999
Q ss_pred CCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 439 VQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 439 i~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
| ++..+..+...|||.+++|+.+..
T Consensus 178 I-~~~t~~~~~~aGAd~~VvGsaIf~ 202 (228)
T 3ovp_A 178 V-GPDTVHKCAEAGANMIVSGSAIMR 202 (228)
T ss_dssp C-STTTHHHHHHHTCCEEEESHHHHT
T ss_pred c-CHHHHHHHHHcCCCEEEEeHHHhC
Confidence 9 589999999999999999998743
No 242
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.57 E-value=0.00061 Score=64.77 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=76.0
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--ccccCcHH-HHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GNVLFGYQ-PRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~v~s~~~-a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
.++.+.++|++.++++...+. ....+.++.+++. +.++.+ ....++++ ++.+.+.|+|++.+....+.. +
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~~-~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~---~- 141 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSADD-STIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQ---A- 141 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSCH-HHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHH---T-
T ss_pred HHHHHHhCCCCEEEEeccCCh-HHHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEEEEeccccc---c-
Confidence 467788999999998876652 1233444555554 445422 22225555 677778899998442111111 1
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 411 VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 411 ~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
+|..+.. ..+++.+.. ++|++++|||+ +..+.++++.|||++.+|+.+..+
T Consensus 142 -~g~~~~~-~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 142 -KPGFDLN-GLLAAGEKA-RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp -STTCCTH-HHHHHHHHH-TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHTS
T ss_pred -cCCCchH-HHHHHhhCC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccCC
Confidence 1221111 344444432 58999999997 788889999999999999988543
No 243
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.56 E-value=0.0004 Score=69.88 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCcEEEEec--------CCCc-hhhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEE
Q psy1056 332 KNRLKLLSQAGVDVVILDS--------SQGN-SIYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~--------~~G~-~~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v 398 (590)
.+.++...++|+..+.+.. ..|. +-.-.+.++.+++.. ++||+.|.=. ..+.++.+.++|||+|+.
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av-~iPV~~K~rig~~~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAV-SIPVMAKCRIGHTTEALVLEAIGVDMIDE 102 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHC-SSCEEEEEETTCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhc-CCCeEEEEeecchHHHHHHHHcCCCEEeh
Confidence 4677777888999985532 1231 111256778888877 7999987544 467888888899999975
No 244
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.54 E-value=0.0004 Score=66.92 Aligned_cols=120 Identities=18% Similarity=0.145 Sum_probs=74.5
Q ss_pred HHHHHcCCcEEEEecCCCch--hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccc
Q psy1056 336 KLLSQAGVDVVILDSSQGNS--IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIG 413 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~G~~--~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g 413 (590)
..+.+.|++.+.+..++... ....+.++..++. ++.+++ .+.+.++.+++.+.|.++|-+ ..+. .-|.|
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~--Gl~~iv-~v~~~~e~~~~~~~~~~~i~~---~~~~---~iGtG 146 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNL--GLETIV-CTNNINTSKAVAALSPDCIAV---EPPE---LIGTG 146 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHH--TCEEEE-EESSSHHHHHHTTTCCSEEEE---CCCC--------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHC--CCeEEE-EeCCchHHHHHHhCCCCEEEE---Eecc---ccccC
Confidence 56778999999985543111 2234555555555 554444 566667778888889987733 1111 10222
Q ss_pred ---c--chh---HHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 414 ---R--NGT---AVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 414 ---~--~~~---~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
. ++. ...+..+... .++|+++.|||+++.++.++...|||+|.+|+.+..+
T Consensus 147 ~~~~t~~~~~~~~~~~~ir~~~-~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 147 IPVSKANPEVVEGTVRAVKEIN-KDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp ---------CSHHHHHHHHHHC-TTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred CCCccCCHHHHHHHHHHHHhcc-CCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 1 121 2222222221 2699999999999999999999999999999988654
No 245
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.49 E-value=0.0004 Score=66.47 Aligned_cols=80 Identities=13% Similarity=0.072 Sum_probs=49.7
Q ss_pred ccCcHHHHHHHHCCCCEEEEcc-cccccCCCc-cccccchhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHcCCC
Q psy1056 379 VLFGYQPRATLLNFIYQIEMIK-FIKKEYPDM-QVIGRNGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALALGAS 454 (590)
Q Consensus 379 v~s~~~a~~l~~~Gvd~i~v~~-~~~~~~~~~-~~~g~~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalalGA~ 454 (590)
+.|.+++.++. .|+|+|.++. ..+..+.+. ..+ .... ++..+.. .++|+++.|||. +.++..+++.||+
T Consensus 95 ~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~--g~~~---l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~ 167 (210)
T 3ceu_A 95 CHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTY--TAEE---LREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFG 167 (210)
T ss_dssp ECSHHHHHTTG-GGSSEEEECCCC---------CCC--CHHH---HHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCS
T ss_pred cCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCC--CHHH---HHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCC
Confidence 34667777666 7888885522 111111110 011 2222 3333333 369999999996 8999999999999
Q ss_pred EEEECccccCC
Q psy1056 455 TAMMGSLLAGT 465 (590)
Q Consensus 455 ~v~~g~~l~~~ 465 (590)
+|.+++.+...
T Consensus 168 gVav~s~i~~~ 178 (210)
T 3ceu_A 168 GAVVLGDLWNK 178 (210)
T ss_dssp EEEESHHHHTT
T ss_pred EEEEhHHhHcC
Confidence 99999988654
No 246
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.00043 Score=68.51 Aligned_cols=172 Identities=13% Similarity=0.069 Sum_probs=97.9
Q ss_pred CCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEE
Q psy1056 267 ISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVV 346 (590)
Q Consensus 267 ~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i 346 (590)
.+..+..+.+.+.+...+-++|=++ ...++++..... ..-.+.++..+. +. .++.++ +|++.+
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~------~n~~~i~~i~~~-----~~~pv~vgGGir---~~--~~~~~l-~Ga~~V 100 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP------NNDDAAREALQE-----SPQFLQVGGGIN---DT--NCLEWL-KWASKV 100 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS------SCHHHHHHHHHH-----STTTSEEESSCC---TT--THHHHT-TTCSCE
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC------CCHHHHHHHHhc-----CCceEEEeCCCC---HH--HHHHHh-cCCCEE
Confidence 3456677788888999999987544 222333332111 112233444443 22 445566 999999
Q ss_pred EEecCC-Cc-----hhhHHHHHHHHHHhCCCc--eEEec---c----c-----------cCc-HHHHHHHHCCCCEEEEc
Q psy1056 347 ILDSSQ-GN-----SIYQIEMIKFIKKEYPDM--QVIGG---N----V-----------LFG-YQPRATLLNFIYQIEMI 399 (590)
Q Consensus 347 ~V~~~~-G~-----~~~~l~~i~~i~~~~~~v--pvi~g---~----v-----------~s~-~~a~~l~~~Gvd~i~v~ 399 (590)
.+.+.- .+ ++.+.+.++.+..+ .+ ++=++ + | .-. +.++.+.++ ++.|.+
T Consensus 101 iigs~a~~~~g~~~p~~~~~~~~~~g~~--~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~- 176 (260)
T 2agk_A 101 IVTSWLFTKEGHFQLKRLERLTELCGKD--RIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLI- 176 (260)
T ss_dssp EECGGGBCTTCCBCHHHHHHHHHHHCGG--GEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEE-
T ss_pred EECcHHHhhcCCCCHHHHHHHHHHhCcC--cEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEE-
Confidence 887641 22 33333334433311 11 11122 1 1 113 788999999 999844
Q ss_pred ccccccCCCccccccchhHHHHHHHHHh-cCCCcEEecCCCCCHHHHHHHHHc--CCCEEEECccc
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYAS-RRGVPVIADGGVQSVGHVMKALAL--GASTAMMGSLL 462 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~-~~~v~iia~GGi~~~~di~kalal--GA~~v~~g~~l 462 (590)
+.+.+++ +.-|...+.+.++.+.+. ..++|+|++|||+++.|+.+++.+ ||++|++|+.|
T Consensus 177 --t~i~~dG-~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 177 --HAADVEG-LCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp --EC--------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred --Eeecccc-CcCCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 2222111 111333444445554431 005999999999999999999999 99999999985
No 247
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.48 E-value=0.0003 Score=67.11 Aligned_cols=111 Identities=15% Similarity=0.139 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCc------eEEeccccCcHHHHHHHHCCCCEEEEccccccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDM------QVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKE 405 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~v------pvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~ 405 (590)
.+.++..+++|+++++. -+.. .+.++..++. ++ |++. ++.|+.++.++.++|+|++++-+.....
T Consensus 75 ~~~a~~ai~AGA~fivs---P~~~---~evi~~~~~~--~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~FPa~~~g 145 (217)
T 3lab_A 75 ADDFQKAIDAGAQFIVS---PGLT---PELIEKAKQV--KLDGQWQGVFLP-GVATASEVMIAAQAGITQLKCFPASAIG 145 (217)
T ss_dssp HHHHHHHHHHTCSEEEE---SSCC---HHHHHHHHHH--HHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEETTTTTTT
T ss_pred HHHHHHHHHcCCCEEEe---CCCc---HHHHHHHHHc--CCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEECcccccc
Confidence 56788899999999974 2222 3445555544 45 8776 7799999999999999999663221100
Q ss_pred CCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 406 YPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 406 ~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
| +..+..++... .++|+++.|||. +..+...+++||.+++.|+.+.
T Consensus 146 -------G--~~~lkal~~p~--p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 146 -------G--AKLLKAWSGPF--PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp -------H--HHHHHHHHTTC--TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred -------C--HHHHHHHHhhh--cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 1 22233333221 258999999996 8999999999999998888884
No 248
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.47 E-value=0.00051 Score=66.54 Aligned_cols=124 Identities=15% Similarity=0.196 Sum_probs=78.4
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCch-hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE---ccccccc-
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNS-IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM---IKFIKKE- 405 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~-~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v---~~~~~~~- 405 (590)
..+.++.+.++|+|++.+-.+.|.+ ..+.+.++.+|+ . ++|++.= .-..+ .+.+|+|++.+ .++....
T Consensus 22 t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~-~-~~Pivl~-~y~~n----~i~~gvDg~iipdLp~ee~~~~ 94 (234)
T 2f6u_A 22 TDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ-Y-GLPIVVE-PSDPS----NVVYDVDYLFVPTVLNSADGDW 94 (234)
T ss_dssp CHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT-S-CCCEEEC-CSSCC----CCCCCSSEEEEEEETTBSBGGG
T ss_pred cHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC-C-CCCEEEe-cCCcc----hhhcCCCEEEEcccCCCCCHHH
Confidence 3567889999999999998777755 557889999987 4 7888741 11100 11667777765 0000000
Q ss_pred ------------------CC--------------------------------------------------Cc---ccccc
Q psy1056 406 ------------------YP--------------------------------------------------DM---QVIGR 414 (590)
Q Consensus 406 ------------------~~--------------------------------------------------~~---~~~g~ 414 (590)
.+ ++ ...|.
T Consensus 95 ~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl~~~G~ 174 (234)
T 2f6u_A 95 ITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIEYSGT 174 (234)
T ss_dssp TTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTS
T ss_pred HhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEEeCCCC
Confidence 00 00 00011
Q ss_pred chhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 415 NGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 415 ~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
......+.+..+.. ++|++..|||+++.++.+++. |||.|.+|+++.
T Consensus 175 -~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v 222 (234)
T 2f6u_A 175 -YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIY 222 (234)
T ss_dssp -CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHH
T ss_pred -cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHH
Confidence 00011223333344 689999999999999999998 999999999884
No 249
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.43 E-value=0.0014 Score=64.91 Aligned_cols=119 Identities=11% Similarity=0.046 Sum_probs=90.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccc-cCcHHHHHHHHCCCCEEEEcccccccCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNV-LFGYQPRATLLNFIYQIEMIKFIKKEYP 407 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v-~s~~~a~~l~~~Gvd~i~v~~~~~~~~~ 407 (590)
-+..+.+....++|++.+.|.+..+...+-.+.+..+++.. ++||+.|+. .+..++..+..+|||+|-+- +...
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi-~a~L--- 153 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCILII-MASV--- 153 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEEEE-TTTS---
T ss_pred CCHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEEEc-cccc---
Confidence 35567888999999999998776555545577888888877 799999875 48889999999999998431 1111
Q ss_pred CccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 408 DMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 408 ~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
....+.++.+.+...++.+++ =+.|..++.+|+.+||+.+.+..+
T Consensus 154 -------~~~~l~~l~~~a~~lGl~~lv--evh~~eEl~~A~~~ga~iIGinnr 198 (272)
T 3tsm_A 154 -------DDDLAKELEDTAFALGMDALI--EVHDEAEMERALKLSSRLLGVNNR 198 (272)
T ss_dssp -------CHHHHHHHHHHHHHTTCEEEE--EECSHHHHHHHTTSCCSEEEEECB
T ss_pred -------CHHHHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHhcCCCEEEECCC
Confidence 223355566666667888887 468999999999999999987743
No 250
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.42 E-value=0.00074 Score=65.69 Aligned_cols=129 Identities=13% Similarity=0.149 Sum_probs=74.5
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCch-hhHHHHHHHHHHhCCCceEEe--cc---cc---------------CcHH-----
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNS-IYQIEMIKFIKKEYPDMQVIG--GN---VL---------------FGYQ----- 384 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~-~~~l~~i~~i~~~~~~vpvi~--g~---v~---------------s~~~----- 384 (590)
..+.++.+.++|+|++.+-.+.|-+ ..+++.++.+|+ . ++|++. +. +. +.+-
T Consensus 22 t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~-~-~~Pivlm~y~~n~i~~G~dg~iiPdLp~ee~~~~~~g~~ 99 (240)
T 1viz_A 22 PDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-F-LVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMH 99 (240)
T ss_dssp CHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT-S-SSCEEEECSCGGGCCSCCSEEEEEEETTBSSGGGTTHHH
T ss_pred cHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC-c-CCCEEEecCccccccCCCCEEEEcccCcccChhhhcchh
Confidence 4567889999999999998877766 447889999988 4 789884 11 10 0111
Q ss_pred HHHHHHCC-----CCEEE----E-ccccc--cc------CC----------------Cc---cccccchhHHHHHHHHHh
Q psy1056 385 PRATLLNF-----IYQIE----M-IKFIK--KE------YP----------------DM---QVIGRNGTAVYRVAEYAS 427 (590)
Q Consensus 385 a~~l~~~G-----vd~i~----v-~~~~~--~~------~~----------------~~---~~~g~~~~~l~~~~~~~~ 427 (590)
...+.+.| .+.|- + ...+. |. .+ +| .+.|. ......+.+..+
T Consensus 100 ~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s~G~-~~~~~~i~~i~~ 178 (240)
T 1viz_A 100 QKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSGV-LGDIEAVKKTKA 178 (240)
T ss_dssp HHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTTS-CCCHHHHHHHHH
T ss_pred HHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeCCCc-cChHHHHHHHHH
Confidence 22333344 33332 1 00000 00 00 00 00111 001112333333
Q ss_pred cC-CCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 428 RR-GVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 428 ~~-~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.. ++|++..|||+|+.++.+++. |||.|.+|+++.
T Consensus 179 ~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v 214 (240)
T 1viz_A 179 VLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVY 214 (240)
T ss_dssp TCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHH
T ss_pred hcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHH
Confidence 44 689999999999999999888 999999999884
No 251
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.40 E-value=0.0036 Score=61.20 Aligned_cols=119 Identities=14% Similarity=0.087 Sum_probs=80.8
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCCCc--eEEecccc-CcHHH----HHHHHCCCCEEEEcc
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYPDM--QVIGGNVL-FGYQP----RATLLNFIYQIEMIK 400 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~~v--pvi~g~v~-s~~~a----~~l~~~Gvd~i~v~~ 400 (590)
..++..++.|++-+-+..+ .|+...+.+.+..+++..++. .+|+-... +.+.. +.+.++|+|+|+.|
T Consensus 115 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS- 193 (260)
T 3r12_A 115 HEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTS- 193 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC-
T ss_pred HHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcC-
Confidence 3567778889998766543 356666788888888776443 44442221 43333 44567999999433
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
|+ |...|.|+..+...++... .+++|-++|||||..|+.+-+.+||+-+...
T Consensus 194 -TG-----f~~~GAT~edV~lm~~~vg-~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 194 -TG-----FGTGGATAEDVHLMKWIVG-DEMGVKASGGIRTFEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp -CS-----SSSCCCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred -CC-----CCCCCCCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCceeecc
Confidence 11 3323336766666666653 4699999999999999999999999977444
No 252
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.39 E-value=0.002 Score=61.94 Aligned_cols=119 Identities=18% Similarity=0.127 Sum_probs=81.2
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCC--CceEEecccc-CcH----HHHHHHHCCCCEEEEcc
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYP--DMQVIGGNVL-FGY----QPRATLLNFIYQIEMIK 400 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~--~vpvi~g~v~-s~~----~a~~l~~~Gvd~i~v~~ 400 (590)
..++..++.|++.+-+... .|+...+.+.+..+++..+ .+|+|+-... +.+ .++.+.++|+|+|+.+-
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 4677788899998876554 3455667788888887653 4566653322 444 34556679999993321
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
. |...|.++..+...++.. ...+||-++|||++..|+.+.+.+||+-+...
T Consensus 155 ----G---f~~~gat~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 155 ----G---FGPRGASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRLGTS 205 (220)
T ss_dssp ----S---SSSCCCCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred ----C---CCCCCCCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCcccchh
Confidence 1 222233666666666655 44699999999999999999999999955443
No 253
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.39 E-value=0.00049 Score=77.86 Aligned_cols=132 Identities=14% Similarity=0.040 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc-------------------------hhhHHHHHHHHHHhCC-CceEEecc-----
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN-------------------------SIYQIEMIKFIKKEYP-DMQVIGGN----- 378 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~-------------------------~~~~l~~i~~i~~~~~-~vpvi~g~----- 378 (590)
+..+.+..+.++|.|.|.|+.++|+ .++.++.++.+++.++ +.||.++=
T Consensus 157 ~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~ 236 (690)
T 3k30_A 157 WHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEE 236 (690)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcccc
Confidence 3445677788899999999887766 1245788899998874 56777542
Q ss_pred ---ccCcH----HHHHHHHCCCCEEEEcccccc---cCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHH
Q psy1056 379 ---VLFGY----QPRATLLNFIYQIEMIKFIKK---EYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKA 448 (590)
Q Consensus 379 ---v~s~~----~a~~l~~~Gvd~i~v~~~~~~---~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~ka 448 (590)
..+.+ -++.|.+ |+|++.|+..+.. ....+...++... .+....+..++|||+.|||.++.++.++
T Consensus 237 ~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~pvi~~G~i~~~~~a~~~ 312 (690)
T 3k30_A 237 IDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEE---FVAGLKKLTTKPVVGVGRFTSPDAMVRQ 312 (690)
T ss_dssp STTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHH---HHTTSGGGCSSCEEECSCCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHH---HHHHHHHHcCCeEEEeCCCCCHHHHHHH
Confidence 11233 3455544 8999988542210 0000111111111 1222223347999999999999999999
Q ss_pred HHcC-CCEEEECccccCC
Q psy1056 449 LALG-ASTAMMGSLLAGT 465 (590)
Q Consensus 449 lalG-A~~v~~g~~l~~~ 465 (590)
|+-| ||+|++|+++.+-
T Consensus 313 l~~g~~d~v~~gR~~~~~ 330 (690)
T 3k30_A 313 IKAGILDLIGAARPSIAD 330 (690)
T ss_dssp HHTTSCSEEEESHHHHHC
T ss_pred HHCCCcceEEEcHHhHhC
Confidence 9998 9999999887643
No 254
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.39 E-value=0.00055 Score=66.13 Aligned_cols=109 Identities=16% Similarity=0.240 Sum_probs=77.0
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
.+.++..+++|+++++. ++.+ .+.++..++ + +.+++.| +.|++++.++.++|+|++.+-. ...
T Consensus 79 ~d~~~~A~~aGAd~v~~--p~~d----~~v~~~ar~-~-g~~~i~G-v~t~~e~~~A~~~Gad~vk~Fp--a~~------ 141 (224)
T 1vhc_A 79 AEQVVLAKSSGADFVVT--PGLN----PKIVKLCQD-L-NFPITPG-VNNPMAIEIALEMGISAVKFFP--AEA------ 141 (224)
T ss_dssp HHHHHHHHHHTCSEEEC--SSCC----HHHHHHHHH-T-TCCEECE-ECSHHHHHHHHHTTCCEEEETT--TTT------
T ss_pred HHHHHHHHHCCCCEEEE--CCCC----HHHHHHHHH-h-CCCEEec-cCCHHHHHHHHHCCCCEEEEee--Ccc------
Confidence 37788889999999963 3322 344555666 4 6788887 8899999999999999996611 110
Q ss_pred cccchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHc-CCCEEEECcccc
Q psy1056 412 IGRNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALAL-GASTAMMGSLLA 463 (590)
Q Consensus 412 ~g~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalal-GA~~v~~g~~l~ 463 (590)
.| .+..+.+++. .. ++|+++.||| |+..+..-+++ |+++|. |+.+.
T Consensus 142 ~g-G~~~lk~l~~---~~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~ 189 (224)
T 1vhc_A 142 SG-GVKMIKALLG---PYAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFV 189 (224)
T ss_dssp TT-HHHHHHHHHT---TTTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGG
T ss_pred cc-CHHHHHHHHh---hCCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-Echhc
Confidence 00 1222333332 33 5999999999 67889999998 999998 88874
No 255
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.38 E-value=0.00056 Score=66.41 Aligned_cols=121 Identities=12% Similarity=0.047 Sum_probs=78.4
Q ss_pred HHHHHHHcCCcEEEEecC--CCchhhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE-cccccccCCCc
Q psy1056 334 RLKLLSQAGVDVVILDSS--QGNSIYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM-IKFIKKEYPDM 409 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~--~G~~~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~ 409 (590)
.++.+.++|+|.++++.. .. ....+.++.+++. +..+.+ =+..|+.+..+....++|+|-+ ++..+ +
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~--~~~~~~~~~i~~~--g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg-----~ 147 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS--PHLHRTLCQIREL--GKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPG-----F 147 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC--TTHHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC-------
T ss_pred HHHHHHHcCCCEEEECcccccc--hhHHHHHHHHHHc--CCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccc-----c
Confidence 457788899999998865 33 2345667777665 443332 2445666665555669998854 44333 2
Q ss_pred cc--ccc-chhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 410 QV--IGR-NGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 410 ~~--~g~-~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
.+ +.. ...-+.++++.... .++||.++|||.. ..+.++...|||.+.+|+.+..
T Consensus 148 ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 148 GGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp --CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred CCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 22 111 33345555554421 2699999999976 8888899999999999998854
No 256
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.37 E-value=0.00098 Score=75.87 Aligned_cols=131 Identities=11% Similarity=0.045 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc------------------------hhhHHHHHHHHHHhCC-CceEEecc------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN------------------------SIYQIEMIKFIKKEYP-DMQVIGGN------ 378 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~------------------------~~~~l~~i~~i~~~~~-~vpvi~g~------ 378 (590)
...+.+..+.++|.|.|.|+.++|+ .++.++.++.+++..+ +.||.++=
T Consensus 150 ~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~ 229 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVY 229 (729)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCc
Confidence 4445677788899999999976631 1335788899998874 67877542
Q ss_pred ---ccC-c----HHHHHHHHCCCCEEEEccccc-----cc-CCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHH
Q psy1056 379 ---VLF-G----YQPRATLLNFIYQIEMIKFIK-----KE-YPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGH 444 (590)
Q Consensus 379 ---v~s-~----~~a~~l~~~Gvd~i~v~~~~~-----~~-~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~d 444 (590)
..+ . +-++.|. .|+|++.|+.... .. ...+.+-++. +..+....+..++|||+.|||.++.+
T Consensus 230 ~~~G~~~~~~~~~~~~~l~-~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~pvi~~G~i~~~~~ 305 (729)
T 1o94_A 230 GPGQIEAEVDGQKFVEMAD-SLVDMWDITIGDIAEWGEDAGPSRFYQQGHT---IPWVKLVKQVSKKPVLGVGRYTDPEK 305 (729)
T ss_dssp CTTSCCTTTHHHHHHHHHG-GGCSEEEEEECCSTTGGGTSCCTTTCCTTTT---HHHHHHHHTTCSSCEECCSCCCCHHH
T ss_pred CCCCCCchHHHHHHHHHHH-hhcCEEEEeeecccccccccCCccccCcccc---HHHHHHHHHHCCCEEEEeCCCCCHHH
Confidence 112 2 2344444 4899998843221 00 0001111111 22223333345799999999999999
Q ss_pred HHHHHHcC-CCEEEECccccC
Q psy1056 445 VMKALALG-ASTAMMGSLLAG 464 (590)
Q Consensus 445 i~kalalG-A~~v~~g~~l~~ 464 (590)
+.++|+.| ||+|++|++|..
T Consensus 306 a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 306 MIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp HHHHHHTTSCSBEEESHHHHH
T ss_pred HHHHHHCCCCCEEEeCchhhc
Confidence 99999998 999999987754
No 257
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.35 E-value=0.00078 Score=65.26 Aligned_cols=123 Identities=16% Similarity=0.084 Sum_probs=75.9
Q ss_pred HHHHHHHHcCCcEEEEecC--CCchhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEE-cccccccCCC
Q psy1056 333 NRLKLLSQAGVDVVILDSS--QGNSIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEM-IKFIKKEYPD 408 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~--~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~~~ 408 (590)
+.++.+.++|++.++++.. .+. ...+.++.+++. +..+++- ...+..+..+....++|+|-+ +...+
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~~--~~~~~~~~~~~~--g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg----- 152 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSSTI--HLHRTINQIKSL--GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPG----- 152 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTCS--CHHHHHHHHHHT--TSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTT-----
T ss_pred HHHHHHHHcCCCEEEEEecCccch--hHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCC-----
Confidence 5677778899999998876 442 234566666654 4444321 123444444444578998843 22111
Q ss_pred cccc--cc-chhHHHHHHHHHh--cCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 409 MQVI--GR-NGTAVYRVAEYAS--RRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 409 ~~~~--g~-~~~~l~~~~~~~~--~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
++|. .+ ....+.++++... ..++|++++|||+ +..+.++++.|||+|.+|+.+..+
T Consensus 153 ~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a 213 (230)
T 1rpx_A 153 FGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGA 213 (230)
T ss_dssp CSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred CCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCC
Confidence 2221 11 2222344444432 1258999999997 788988999999999999998644
No 258
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.35 E-value=0.00024 Score=69.80 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=54.7
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+-|+.+.++|+++|.+.-.. +. ..+.|... ..+.+.++..++|+|+.|||+++.|+.++++.|||.|++|+
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~-~~---~~~~~~~~---~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSID-RD---GTKSGYDT---EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETT-TT---TCSSCCCH---HHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSH
T ss_pred HHHHHHHHHHcCCCEEEEEecC-cc---cCCCcccH---HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhh
Confidence 4577889999999999652111 11 11112222 23444555568999999999999999999999999999998
Q ss_pred ccc
Q psy1056 461 LLA 463 (590)
Q Consensus 461 ~l~ 463 (590)
.+.
T Consensus 110 ~~l 112 (247)
T 3tdn_A 110 AAV 112 (247)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 259
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.34 E-value=0.00063 Score=65.28 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=75.0
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccc
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVI 412 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~ 412 (590)
+.++..+++|+++++. ++.+ .+.++..+ .+ +.+++.| +.|++++.++.++|+|++.+-. ... .
T Consensus 79 d~~~~A~~aGAd~v~~--p~~d----~~v~~~~~-~~-g~~~i~G-~~t~~e~~~A~~~Gad~v~~Fp--a~~------~ 141 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAIS--PGLT----EPLLKAAT-EG-TIPLIPG-ISTVSELMLGMDYGLKEFKFFP--AEA------N 141 (214)
T ss_dssp HHHHHHHHHTCSCEEE--SSCC----HHHHHHHH-HS-SSCEEEE-ESSHHHHHHHHHTTCCEEEETT--TTT------T
T ss_pred HHHHHHHHcCCCEEEc--CCCC----HHHHHHHH-Hh-CCCEEEe-cCCHHHHHHHHHCCCCEEEEec--Ccc------c
Confidence 6788889999999974 3322 23333333 34 6788876 8999999999999999996611 111 0
Q ss_pred ccchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHc-CCCEEEECcccc
Q psy1056 413 GRNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALAL-GASTAMMGSLLA 463 (590)
Q Consensus 413 g~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalal-GA~~v~~g~~l~ 463 (590)
| .+. .+....... ++|+++.||| |+..+..-+++ |+++|. |+.+.
T Consensus 142 g-G~~---~lk~i~~~~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~ 188 (214)
T 1wbh_A 142 G-GVK---ALQAIAGPFSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLV 188 (214)
T ss_dssp T-HHH---HHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGS
T ss_pred c-CHH---HHHHHhhhCCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-ecccc
Confidence 0 122 233333333 6999999999 67889999998 999988 88884
No 260
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.27 E-value=0.0022 Score=64.27 Aligned_cols=113 Identities=16% Similarity=0.103 Sum_probs=72.7
Q ss_pred HHHHHHcCCcEEEEecCCCc--hhhHHHHHHHHHH---hCCCceEEecc-----c-cCc----HHHHHHHHCCCCEEEEc
Q psy1056 335 LKLLSQAGVDVVILDSSQGN--SIYQIEMIKFIKK---EYPDMQVIGGN-----V-LFG----YQPRATLLNFIYQIEMI 399 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G~--~~~~l~~i~~i~~---~~~~vpvi~g~-----v-~s~----~~a~~l~~~Gvd~i~v~ 399 (590)
++..++.|++.+.++..-|. ....++.+..+++ .+ ++|+|+-. + .+. ..++.+.++|+|+|+++
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~-GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKV-GMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTT-TCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHc-CCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 45567899999887765443 2334554444443 34 68888611 1 122 25567778999999664
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHH-----HHHHHHHcCCCEEEECccccCC
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVG-----HVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~-----di~kalalGA~~v~~g~~l~~~ 465 (590)
.. . ..+.++. ....+||+++||+..+. .+..|+..||+++.+|+.+...
T Consensus 210 ~t-~-------------e~~~~vv---~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 210 YV-E-------------KGFERIV---AGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp CC-T-------------TTHHHHH---HTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred CC-H-------------HHHHHHH---HhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 21 1 1223333 33469999999999643 4667889999999999887544
No 261
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.27 E-value=0.0025 Score=61.62 Aligned_cols=120 Identities=15% Similarity=0.057 Sum_probs=75.2
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEec-cccCc-HHHHHHHHC--CCCEEEE-cccccccCCC
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-NVLFG-YQPRATLLN--FIYQIEM-IKFIKKEYPD 408 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~s~-~~a~~l~~~--Gvd~i~v-~~~~~~~~~~ 408 (590)
.++.+.++|+|.++++..+... .+.+.++.+++. +..+++- +..+. +..+.+.+. ++|+|-+ ++..+
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~-~~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg----- 150 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRD-NWQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPG----- 150 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTT-THHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTT-----
T ss_pred HHHHHHHcCCCEEEECCCCccc-HHHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCC-----
Confidence 4666777999999887754332 124566666665 4544431 22344 445555565 9999965 33322
Q ss_pred ccc--ccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 409 MQV--IGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 409 ~~~--~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
+++ +.+ ....+.++++... ++|++++|||.. ..+.+++..|||.+.+|+.+..
T Consensus 151 ~~g~~~~~~~l~~i~~~~~~~~--~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~ 206 (228)
T 1h1y_A 151 FGGQKFMPEMMEKVRALRKKYP--SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFG 206 (228)
T ss_dssp CSSCCCCGGGHHHHHHHHHHCT--TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHT
T ss_pred CCcccCCHHHHHHHHHHHHhcC--CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 222 222 2233334443321 689999999976 7888899999999999998854
No 262
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.23 E-value=0.001 Score=64.26 Aligned_cols=108 Identities=10% Similarity=0.118 Sum_probs=74.6
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccc
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVI 412 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~ 412 (590)
+.++..+++|+++++. .+-+ .+.++. ++.+ +.+++.| +.|++++.++.++|+|++.+-. ... . .
T Consensus 89 d~~~~A~~aGAd~v~~--p~~d----~~v~~~-~~~~-g~~~i~G-~~t~~e~~~A~~~Gad~vk~FP--a~~---~--~ 152 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVT--PGIT----EDILEA-GVDS-EIPLLPG-ISTPSEIMMGYALGYRRFKLFP--AEI---S--G 152 (225)
T ss_dssp HHHHHHHHHTCSSEEC--SSCC----HHHHHH-HHHC-SSCEECE-ECSHHHHHHHHTTTCCEEEETT--HHH---H--T
T ss_pred HHHHHHHHCCCCEEEe--CCCC----HHHHHH-HHHh-CCCEEEe-eCCHHHHHHHHHCCCCEEEEcc--Ccc---c--c
Confidence 6788889999999973 3322 233333 3344 6788876 8999999999999999996511 000 0 0
Q ss_pred ccchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHH-cCCCEEEECcccc
Q psy1056 413 GRNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALA-LGASTAMMGSLLA 463 (590)
Q Consensus 413 g~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kala-lGA~~v~~g~~l~ 463 (590)
| +..+....... ++|+++.||| |+..+..-++ .||++|. |+.+.
T Consensus 153 G-----~~~lk~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~ 198 (225)
T 1mxs_A 153 G-----VAAIKAFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWML 198 (225)
T ss_dssp H-----HHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTS
T ss_pred C-----HHHHHHHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-Echhc
Confidence 1 12233333333 6999999999 6778988999 5999999 88884
No 263
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.22 E-value=0.0021 Score=70.12 Aligned_cols=85 Identities=13% Similarity=0.051 Sum_probs=58.3
Q ss_pred cccCcHHHHHHHHCC---CCEEEE-cccccccCCCc--cccccchhHHHHHHHHHh---cCCCcEEecCCCCCHHHHHHH
Q psy1056 378 NVLFGYQPRATLLNF---IYQIEM-IKFIKKEYPDM--QVIGRNGTAVYRVAEYAS---RRGVPVIADGGVQSVGHVMKA 448 (590)
Q Consensus 378 ~v~s~~~a~~l~~~G---vd~i~v-~~~~~~~~~~~--~~~g~~~~~l~~~~~~~~---~~~v~iia~GGi~~~~di~ka 448 (590)
.+.+.++++++.+.| +|||-+ .+..+..+.+. ...| +..+.++.+.+. ..++|++|-||| ++.++.+.
T Consensus 114 S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G--~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v 190 (540)
T 3nl6_A 114 SVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMG--TAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERV 190 (540)
T ss_dssp EECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCH--HHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHH
T ss_pred ECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCC--HHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHH
Confidence 555889999999999 999976 23333222111 1122 333444444432 136999999999 88999999
Q ss_pred HH--------cCCCEEEECccccCC
Q psy1056 449 LA--------LGASTAMMGSLLAGT 465 (590)
Q Consensus 449 la--------lGA~~v~~g~~l~~~ 465 (590)
++ .||++|.+++.+..+
T Consensus 191 ~~~~~~~g~~~GadgvAVvsaI~~a 215 (540)
T 3nl6_A 191 LYQCVSSNGKRSLDGICVVSDIIAS 215 (540)
T ss_dssp HHHCBCTTSSCBCSCEEESHHHHTC
T ss_pred HHhhcccccccCceEEEEeHHHhcC
Confidence 98 899999999988754
No 264
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.21 E-value=0.0023 Score=63.39 Aligned_cols=117 Identities=16% Similarity=0.157 Sum_probs=75.2
Q ss_pred HHHHHHHHcCCcEEEEec--CCCchhhHHHHHHHHHH---hCCCceEEecccc---------CcHH----HHHHHHCCCC
Q psy1056 333 NRLKLLSQAGVDVVILDS--SQGNSIYQIEMIKFIKK---EYPDMQVIGGNVL---------FGYQ----PRATLLNFIY 394 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~--~~G~~~~~l~~i~~i~~---~~~~vpvi~g~v~---------s~~~----a~~l~~~Gvd 394 (590)
..++..++.|++.+.+.. ..++...+++.++.+++ .+ ++|+|+-.-. +.+. ++.+.++|+|
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~-~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKF-DLPLVVESFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHH-TCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHc-CCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 345667889999887655 44444445555555543 34 6777752111 2232 3567789999
Q ss_pred EEEEcccccccCCCccccccchhHHHHHHHHHhcCCC-cEEecCCCC--CHHHHHHHH----HcCCCEEEECccccCC
Q psy1056 395 QIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGV-PVIADGGVQ--SVGHVMKAL----ALGASTAMMGSLLAGT 465 (590)
Q Consensus 395 ~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v-~iia~GGi~--~~~di~kal----alGA~~v~~g~~l~~~ 465 (590)
+|.++. + . +.+.+.++.+.+ +. ||+++|||+ +..|..+.+ ..||+++.+|+.+...
T Consensus 175 ~vkt~~--~-~---------~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 175 AMKIKY--T-G---------DPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp EEEEEC--C-S---------SHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred EEEEcC--C-C---------CHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 996651 1 1 333444454443 45 999999999 777766655 8999999999988544
No 265
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.19 E-value=0.0086 Score=57.65 Aligned_cols=119 Identities=17% Similarity=0.081 Sum_probs=80.9
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCCCc--eEEec--cc---cCcHHH----HHHHHCCCCEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYPDM--QVIGG--NV---LFGYQP----RATLLNFIYQI 396 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~~v--pvi~g--~v---~s~~~a----~~l~~~Gvd~i 396 (590)
..++..++.|++-+-+..+ .|+...+.+.+..+++..++. .+|+- .. .+.+.. +.+.++|+|+|
T Consensus 84 ~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfV 163 (231)
T 3ndo_A 84 TEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFV 163 (231)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEE
Confidence 3577788899998766543 366667788888888876443 44431 11 133333 44556999999
Q ss_pred EEcccccccCCCcc-ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 397 EMIKFIKKEYPDMQ-VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 397 ~v~~~~~~~~~~~~-~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
+.| . ||. ..|.|+..+...++... .+++|-++|||||..|+.+-+.+||+-+...
T Consensus 164 KTS----T---Gf~~~~gAt~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS 219 (231)
T 3ndo_A 164 KTS----T---GFHPSGGASVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATRLGLS 219 (231)
T ss_dssp ECC----C---SCCTTCSCCHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred EcC----C---CCCCCCCCCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchhcccc
Confidence 332 1 132 22337777777777664 4699999999999999999999999976443
No 266
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.19 E-value=0.0016 Score=62.76 Aligned_cols=121 Identities=14% Similarity=0.147 Sum_probs=75.4
Q ss_pred HHHHHHHcCCcEEEEecCCCch-hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE-cccccccC-----
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNS-IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM-IKFIKKEY----- 406 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~-~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~----- 406 (590)
.++.+.+.|.|++.|-.+.|-+ +.+.+.++.+++ + ++|++. ...+.+.. ..|+|++.+ +.-+++..
T Consensus 23 ~~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~-~-~~Pvvl-fp~~~~~v----~~gaD~~l~pslln~~~~~~i~g 95 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-F-LVPCVL-EVSAIEAI----VPGFDLYFIPSVLNSKNADWIVG 95 (228)
T ss_dssp HHHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTT-S-SSCEEE-ECSCGGGC----CSCCSEEEEEEETTBSSGGGTTH
T ss_pred HHHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhc-c-CCCEEE-eCCCHHHc----cccCCEEEEeeecCCCCcchhhh
Confidence 4555678899999987777654 557788888887 5 788875 44444322 357777765 00000000
Q ss_pred ----------------------------C------------------------------C---ccccccchhHHHHHHHH
Q psy1056 407 ----------------------------P------------------------------D---MQVIGRNGTAVYRVAEY 425 (590)
Q Consensus 407 ----------------------------~------------------------------~---~~~~g~~~~~l~~~~~~ 425 (590)
+ + ..+-|. ......+++.
T Consensus 96 ~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~sG~-~~~~~~i~~i 174 (228)
T 3vzx_A 96 MHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSGV-LGDIEAVKKT 174 (228)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTTS-CCCHHHHHHH
T ss_pred HHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecCCCC-cCCHHHHHHH
Confidence 0 0 001122 0111223333
Q ss_pred HhcC-CCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 426 ASRR-GVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 426 ~~~~-~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.+.. ++|++..|||+++.++.+++ .|||.|.+|+++.
T Consensus 175 ~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v 212 (228)
T 3vzx_A 175 KAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVY 212 (228)
T ss_dssp HHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHH
T ss_pred HHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHh
Confidence 3334 58999999999999999887 7999999999883
No 267
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.11 E-value=0.004 Score=59.35 Aligned_cols=107 Identities=21% Similarity=0.152 Sum_probs=76.8
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--ccccCcHHHHHHHHCCCCEEEEcccccccC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GNVLFGYQPRATLLNFIYQIEMIKFIKKEY 406 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~ 406 (590)
.+..+.++.+.+.|++.+++...... ..+.++.+++.+ ++++++ +.+.+.+.++.+.++|+|+| +....
T Consensus 19 ~~~~~~~~~~~~~G~~~i~l~~~~~~---~~~~i~~i~~~~-~~~l~vg~g~~~~~~~i~~a~~~Gad~V----~~~~~- 89 (212)
T 2v82_A 19 DEALAHVGAVIDAGFDAVEIPLNSPQ---WEQSIPAIVDAY-GDKALIGAGTVLKPEQVDALARMGCQLI----VTPNI- 89 (212)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTSTT---HHHHHHHHHHHH-TTTSEEEEECCCSHHHHHHHHHTTCCEE----ECSSC-
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCChh---HHHHHHHHHHhC-CCCeEEEeccccCHHHHHHHHHcCCCEE----EeCCC-
Confidence 34566788888999999999766432 245667777766 455554 66778899999999999999 21111
Q ss_pred CCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 407 PDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 407 ~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
. .++.+.++..+.+++. |+.|+.++.+|..+|||++.+
T Consensus 90 --------~----~~~~~~~~~~g~~~~~--g~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 --------H----SEVIRRAVGYGMTVCP--GCATATEAFTALEAGAQALKI 127 (212)
T ss_dssp --------C----HHHHHHHHHTTCEEEC--EECSHHHHHHHHHTTCSEEEE
T ss_pred --------C----HHHHHHHHHcCCCEEe--ecCCHHHHHHHHHCCCCEEEE
Confidence 1 1223344455778877 499999999999999999975
No 268
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.11 E-value=0.0091 Score=57.38 Aligned_cols=120 Identities=8% Similarity=-0.055 Sum_probs=80.1
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCC--CceEEecccc-CcHH----HHHHHHCCCCEEEEcc
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYP--DMQVIGGNVL-FGYQ----PRATLLNFIYQIEMIK 400 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~--~vpvi~g~v~-s~~~----a~~l~~~Gvd~i~v~~ 400 (590)
..++. ++.|++-+-+... .|+...+.+.+..+++..+ .+++|+-... +.+. ++.+.++|+|+|+.|-
T Consensus 71 ~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTST 149 (226)
T 1vcv_A 71 ALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSST 149 (226)
T ss_dssp HHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 35667 8999998765543 4666667888888888653 3566653333 4443 3456669999994431
Q ss_pred cccccCCCcc----------ccccchhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHc---CCC----EEEECc
Q psy1056 401 FIKKEYPDMQ----------VIGRNGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALAL---GAS----TAMMGS 460 (590)
Q Consensus 401 ~~~~~~~~~~----------~~g~~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalal---GA~----~v~~g~ 460 (590)
. |. ..|.|+..+...++..+. .+++|-++|||||..|+.+-+.+ ||+ -+...+
T Consensus 150 G-------f~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 150 G-------FAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp S-------CCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred C-------CCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 1 22 223366666655655222 34999999999999999999999 999 665443
No 269
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.09 E-value=0.0034 Score=58.57 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.8
Q ss_pred cCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 428 RRGVPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 428 ~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
..++|+||.|+|++..|+.+||..||++|..|..-
T Consensus 148 ~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 148 KLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp HHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGG
T ss_pred hcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHH
Confidence 34799999999999999999999999999998654
No 270
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.09 E-value=0.0021 Score=62.03 Aligned_cols=59 Identities=8% Similarity=0.123 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCcEEEEecCCCch-hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNS-IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~-~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.++.+.+.|+|++.|-.+.|-+ +.+.+.++.+|+ + ++|++. ...+.+.. ..|+|++.+
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~-~~Piil-~p~~~~~~----~~gaD~il~ 86 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-Y-PLPLVL-EISNIESV----MPGFDFYFV 86 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-S-CSCEEE-ECCCSTTC----CTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-c-CCCEEE-ecCCHHHh----hcCCCEEEE
Confidence 45566788999999998877765 557888888888 4 788875 33333222 347777765
No 271
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.06 E-value=0.0045 Score=60.83 Aligned_cols=127 Identities=15% Similarity=0.036 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC---------------Cch-hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ---------------GNS-IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFI 393 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~---------------G~~-~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gv 393 (590)
.....++.+.++|+..+ +|.+. |.. ....+.++..++. +.. -+--+.++++|+.+.++|+
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~--gL~-Ti~~v~~~eeA~amA~agp 184 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL--DLL-TTPYVFSPEDAVAMAKAGA 184 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT--TCE-ECCEECSHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC--CCe-EEEecCCHHHHHHHHHcCC
Confidence 34456688999999998 77651 111 1224555555554 433 3346779999999999999
Q ss_pred CEEEEcccccccCCCcccccc--c----hhHHHHHHHHHhc--CCCcEEecC-CCCCHHHHHHHHHc--CCCEEEECccc
Q psy1056 394 YQIEMIKFIKKEYPDMQVIGR--N----GTAVYRVAEYASR--RGVPVIADG-GVQSVGHVMKALAL--GASTAMMGSLL 462 (590)
Q Consensus 394 d~i~v~~~~~~~~~~~~~~g~--~----~~~l~~~~~~~~~--~~v~iia~G-Gi~~~~di~kalal--GA~~v~~g~~l 462 (590)
|+|.+-+..|.. +.-|++. + ++.+.++.++++. .++.+++.| ||.+|.|+.+++.+ ||+.+..++.+
T Consensus 185 DiI~~h~glT~g--glIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsi 262 (286)
T 2p10_A 185 DILVCHMGLTTG--GAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSM 262 (286)
T ss_dssp SEEEEECSCC-----------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHH
T ss_pred CEEEECCCCCCC--CcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhh
Confidence 999553322211 1333332 2 1223334444433 257777755 99999999999999 99999888766
No 272
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.03 E-value=0.00092 Score=65.58 Aligned_cols=77 Identities=21% Similarity=0.124 Sum_probs=54.7
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+.++.+.++|+|+|.++-. ... . .+ ....+..+++.++..++|+|+.|||++..++.+++++|||+|.+|+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~d~-~~~---~--~~-~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 105 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFLDI-SAT---H--EE-RAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNS 105 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEEEC-CSS---T--TC-HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEEcC-Ccc---c--cC-ccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 346778889999999855311 101 0 01 2222334555555668999999999999999999999999999998
Q ss_pred cccC
Q psy1056 461 LLAG 464 (590)
Q Consensus 461 ~l~~ 464 (590)
.+..
T Consensus 106 ~~l~ 109 (252)
T 1ka9_F 106 AAVR 109 (252)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7653
No 273
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.02 E-value=0.0052 Score=60.46 Aligned_cols=119 Identities=12% Similarity=0.029 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
+..+.++...++|+..+++.+..+...+..+.++.+++.. ++|++.|+.. +..++..+.++|||+|-+-. ..
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~---~~--- 138 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLIV---AL--- 138 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEEH---HH---
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEECc---cc---
Confidence 4568889999999999999776665555677888888887 8999988754 77789999999999995410 00
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+ + ..+.++.+.+...++.++. -+++..++.+|+.+||+.+.++..+.
T Consensus 139 l-----~-~~l~~l~~~a~~lGl~~lv--ev~~~~E~~~a~~~gad~IGvn~~~l 185 (254)
T 1vc4_A 139 L-----G-ELTGAYLEEARRLGLEALV--EVHTERELEIALEAGAEVLGINNRDL 185 (254)
T ss_dssp H-----G-GGHHHHHHHHHHHTCEEEE--EECSHHHHHHHHHHTCSEEEEESBCT
T ss_pred h-----H-HHHHHHHHHHHHCCCeEEE--EECCHHHHHHHHHcCCCEEEEccccC
Confidence 0 1 2233444444445666665 56788999999999999999987764
No 274
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.98 E-value=0.0036 Score=60.61 Aligned_cols=120 Identities=18% Similarity=0.135 Sum_probs=77.0
Q ss_pred HHHHHHHcCCcEEEEecCC-CchhhHHHHHHHHHHhCCCceEE-eccccCcHHHHHHHHCCCCEEEE-cccccccCCCcc
Q psy1056 334 RLKLLSQAGVDVVILDSSQ-GNSIYQIEMIKFIKKEYPDMQVI-GGNVLFGYQPRATLLNFIYQIEM-IKFIKKEYPDMQ 410 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~-G~~~~~l~~i~~i~~~~~~vpvi-~g~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~ 410 (590)
.++.+.++|++.+.++... .. ...+.++.+++. +..+. .=+..|+.+..+-...++|.|-+ +++.+ |.
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~~--~~~~~i~~i~~~--G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pG-----fg 142 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETING--QAFRLIDEIRRH--DMKVGLILNPETPVEAMKYYIHKADKITVMTVDPG-----FA 142 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCTT--THHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTT-----CS
T ss_pred HHHHHHHcCCCEEEECcccCCc--cHHHHHHHHHHc--CCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccC-----cC
Confidence 4577889999999987643 32 345677777776 33322 22555554433333348998854 44332 33
Q ss_pred cc--cc-chhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHcCCCEEEEC-cccc
Q psy1056 411 VI--GR-NGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALALGASTAMMG-SLLA 463 (590)
Q Consensus 411 ~~--g~-~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalalGA~~v~~g-~~l~ 463 (590)
|. .. +..-+.++++.... .+++|.++|||. ...+.++...|||.+++| +.+.
T Consensus 143 gQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif 200 (231)
T 3ctl_A 143 GQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLF 200 (231)
T ss_dssp SCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTG
T ss_pred CccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHh
Confidence 32 21 33334556655532 358999999995 677889999999999999 9883
No 275
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=96.98 E-value=0.017 Score=59.08 Aligned_cols=65 Identities=17% Similarity=0.284 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEEecC--CCch--hhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS--QGNS--IYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~--~G~~--~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.+..+.+.|+|.+.++.. .|+. ....+.+..+++.. ++|+++ |++.+++++.+++++|+|++.+
T Consensus 121 ~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~v 190 (332)
T 2z6i_A 121 ALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQV 190 (332)
T ss_dssp HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEe
Confidence 4566778899999999753 2221 23457888888877 789885 6777899999999999999977
No 276
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.96 E-value=0.0037 Score=60.73 Aligned_cols=124 Identities=14% Similarity=-0.031 Sum_probs=79.5
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC-------Cc-eEEeccccCcHHHHHHHHCCCCEEEE-cccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP-------DM-QVIGGNVLFGYQPRATLLNFIYQIEM-IKFI 402 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-------~v-pvi~g~v~s~~~a~~l~~~Gvd~i~v-~~~~ 402 (590)
...++.+.++|+|.+.++..... ...+.++++++.++ +. .-+.=+..|+.+..+-...++|+|-+ +++.
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~~--~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~p 159 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQYH--DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDP 159 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCTT--SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEEEESEET
T ss_pred HHHHHHHHHcCCCEEEEecCCcc--cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceeeeeeecc
Confidence 46788889999999988876542 24556666665411 11 22222445665554444468998855 4433
Q ss_pred cccCCCcccccc---chhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHH--cCCCEEEECcccc
Q psy1056 403 KKEYPDMQVIGR---NGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALA--LGASTAMMGSLLA 463 (590)
Q Consensus 403 ~~~~~~~~~~g~---~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kala--lGA~~v~~g~~l~ 463 (590)
+ |.|.-. ...-+.++++.... .++||.++||| |...+.++.. .|||.+++|+.+.
T Consensus 160 g-----fggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI-~~~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 160 R-----NGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSM-TLELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp T-----TTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSC-CHHHHHHHHHSSSCCCCEEECGGGG
T ss_pred C-----cCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCc-CHHHHHHHHHhCCCCcEEEEeeHHh
Confidence 2 322111 23334555555532 25899999999 5888999999 9999999999884
No 277
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.94 E-value=0.003 Score=63.45 Aligned_cols=89 Identities=13% Similarity=-0.003 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G 437 (590)
+.+.++.+++.+|+.++++ ++.+.++++++.++|+|+|.+.. . ++..+.++.+... .++++.++|
T Consensus 195 i~~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~----~---------~~e~l~~~v~~~~-~~~~I~ASG 259 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDN----F---------NTDQMREAVKRVN-GQARLEVSG 259 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESS----C---------CHHHHHHHHHTTC-TTCCEEECC
T ss_pred HHHHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhC-CCCeEEEEC
Confidence 4677888888887655655 88899999999999999994421 1 3344444444332 258999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l 462 (590)
|| |...+..-...|||.+.+|++.
T Consensus 260 GI-t~~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 260 NV-TAETLREFAETGVDFISVGALT 283 (296)
T ss_dssp CS-CHHHHHHHHHTTCSEEECSHHH
T ss_pred CC-CHHHHHHHHHcCCCEEEEeHHH
Confidence 99 9999999999999999999854
No 278
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.90 E-value=0.03 Score=57.08 Aligned_cols=65 Identities=22% Similarity=0.219 Sum_probs=48.7
Q ss_pred HHHHHHHHcCCcEEEEecCC--Cch----hhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSSQ--GNS----IYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~--G~~----~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.+..+.+.|+|.+.++... |+. ....+.+..+++.. ++|+++ |++.+.+++.++..+|+|++.+
T Consensus 129 ~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~v 200 (328)
T 2gjl_A 129 RHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINM 200 (328)
T ss_dssp HHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 44556778999999987532 231 13467788887766 789885 6666899999999999999977
No 279
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.88 E-value=0.003 Score=66.14 Aligned_cols=67 Identities=49% Similarity=0.760 Sum_probs=53.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhccccccc
Q psy1056 139 KYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVG 206 (590)
Q Consensus 139 ~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v~ 206 (590)
.+++..++++|+|+|++|+++++.....+.++++++.++ ..++-.++.+.+..+.+.+..+|+|+||
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~-i~Vi~g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMN-IDVIVGNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCC-CEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCC-CeEEEeecCCHHHHHHHHHcCCCEEEEe
Confidence 467788899999999999999998888999999887553 3355566666777778888888888776
No 280
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=96.86 E-value=0.0027 Score=62.60 Aligned_cols=69 Identities=13% Similarity=0.003 Sum_probs=49.3
Q ss_pred HHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 385 PRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 385 a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
++...++|...+++.... +. .....+..+++.+. .++|+++.|||+++.|+.+++.+|||.|.+|+.+.
T Consensus 192 a~~gad~G~~lV~LD~~~-~~--------v~~e~V~~I~~~~~-~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav 260 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN-EH--------VPPEVVRHFRKGLG-PDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALE 260 (286)
T ss_dssp HHHHHHTTCSEEEEECSS-SC--------CCHHHHHHHHHHSC-TTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGS
T ss_pred HHHHHHcCCCEEEEcCCC-Cc--------CCHHHHHHHHHhcC-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhh
Confidence 344557888888664322 11 13344444544321 06999999999999999999999999999999884
No 281
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=96.84 E-value=0.016 Score=55.78 Aligned_cols=122 Identities=15% Similarity=0.097 Sum_probs=78.2
Q ss_pred HHHHHHcCCcEEEEecCC--CchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCcccc
Q psy1056 335 LKLLSQAGVDVVILDSSQ--GNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVI 412 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~--G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~ 412 (590)
+..+.+.|++.+.+-.++ -....+.+.++...+. +...++ .|++.++.+.+...+.+.|- ...+- .-|.
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~--GL~~iv-cVge~~e~~~~~~~~~~iIa---yep~w---aiGt 151 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEV--GLMTMV-CSNNPAVSAAVAALNPDYVA---VEPPE---LIGT 151 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHH--TCEEEE-EESSHHHHHHHHTTCCSEEE---ECCTT---TTTT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHC--CCEEEE-EeCCHHHHHHHhcCCCCEEE---EeChh---hhcc
Confidence 355778899998876554 1112234444444444 444444 67777777788888888662 22232 3445
Q ss_pred c----c-chhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 413 G----R-NGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 413 g----~-~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
| . +++.+.+..+..+. .+++++..|||.++.++..+...|+|++.+|+.+..+
T Consensus 152 G~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a 211 (225)
T 1hg3_A 152 GIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKA 211 (225)
T ss_dssp SCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTC
T ss_pred CCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCC
Confidence 5 2 34323333322221 2589999999999999999999999999999887543
No 282
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.83 E-value=0.016 Score=55.79 Aligned_cols=121 Identities=21% Similarity=0.177 Sum_probs=77.4
Q ss_pred HHHHHcCCcEEEEecCCC--chhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccc
Q psy1056 336 KLLSQAGVDVVILDSSQG--NSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIG 413 (590)
Q Consensus 336 ~~li~~gad~i~V~~~~G--~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g 413 (590)
..+.+.|++.+.+-.++- ....+.+.++...+. +...++ .|++.++.+.+...+.+.|- ...+- .-|.|
T Consensus 79 ~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~--GL~~iv-cVge~~e~~~~~~~~~~iIa---yep~w---aiGtG 149 (226)
T 1w0m_A 79 ENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSL--GLDVVV-CAPDPRTSLAAAALGPHAVA---VEPPE---LIGTG 149 (226)
T ss_dssp HHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHT--TCEEEE-EESSHHHHHHHHHTCCSEEE---ECCGG---GTTTS
T ss_pred HHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHC--CCEEEE-EeCCHHHHHHHhcCCCCEEE---EcChh---hhccC
Confidence 456788999988866552 112233444444333 444444 67777777788888888662 22222 34455
Q ss_pred ----c-chhHHHHHHHHHhc--CCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 414 ----R-NGTAVYRVAEYASR--RGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 414 ----~-~~~~l~~~~~~~~~--~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
. +++.+.+..+..+. .+++++..|||.++.++..+...|+|++.+|+.+..+
T Consensus 150 ~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 150 RAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred CCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC
Confidence 2 33323333222221 2589999999999999999999999999999887543
No 283
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.81 E-value=0.0036 Score=62.50 Aligned_cols=90 Identities=18% Similarity=0.086 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhCCC-ceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEec
Q psy1056 358 QIEMIKFIKKEYPD-MQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIAD 436 (590)
Q Consensus 358 ~l~~i~~i~~~~~~-vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~ 436 (590)
+...++..++.+|. .++.+ ++.+.++++++.++|+|+|-+.. . .++.+.++.+..+. ++|+.++
T Consensus 182 i~~av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~----~---------~~~~~k~av~~v~~-~ipi~As 246 (286)
T 1x1o_A 182 VGEAVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDN----F---------PLEALREAVRRVGG-RVPLEAS 246 (286)
T ss_dssp HHHHHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEES----C---------CHHHHHHHHHHHTT-SSCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhCC-CCeEEEE
Confidence 35678888888865 46666 88899999999999999993311 1 33344444444432 5999999
Q ss_pred CCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 437 GGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 437 GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
||| |...+..-.+.|+|++.+|+...
T Consensus 247 GGI-t~eni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 247 GNM-TLERAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp SSC-CHHHHHHHHHHTCSEEECTHHHH
T ss_pred cCC-CHHHHHHHHHcCCCEEEEcHHHc
Confidence 999 78999999999999999998663
No 284
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.81 E-value=0.0051 Score=60.95 Aligned_cols=115 Identities=14% Similarity=0.057 Sum_probs=75.5
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchh---hHHHHHHHHHHhCCCce--EEecccc--CcH----HHHHHHHCCCCEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSI---YQIEMIKFIKKEYPDMQ--VIGGNVL--FGY----QPRATLLNFIYQI 396 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~---~~l~~i~~i~~~~~~vp--vi~g~v~--s~~----~a~~l~~~Gvd~i 396 (590)
..++..++.|++-|-+... .|+.. .+.+.+..+++..++.| +|+-... +.+ .++.+.++|+|+|
T Consensus 110 ~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfV 189 (281)
T 2a4a_A 110 NDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNGNADFI 189 (281)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEE
Confidence 4567778889998765543 34555 66778888887764444 3432221 333 3456777999999
Q ss_pred EEcccccccCCCccccccchhHHHHHHHHHh---------cCCCcEEecCCCCCHHHHHHHHHcCCC
Q psy1056 397 EMIKFIKKEYPDMQVIGRNGTAVYRVAEYAS---------RRGVPVIADGGVQSVGHVMKALALGAS 454 (590)
Q Consensus 397 ~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~---------~~~v~iia~GGi~~~~di~kalalGA~ 454 (590)
+.| - ||...|.|+..+...++..+ ..+++|-++|||||..|+.+-+.+||+
T Consensus 190 KTS----T---Gf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 190 KTS----T---GKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp ECC----C---SCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred EeC----C---CCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 332 1 13322336666555555542 346999999999999999999999876
No 285
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=96.80 E-value=0.0023 Score=63.31 Aligned_cols=76 Identities=18% Similarity=0.199 Sum_probs=54.0
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+.++.+.++|+++|.++- .... ..+.|... ..+.+.++..++|+|+.|||++..++.+++.+|||+|.+|+
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d-~~~~---~~~~g~~~---~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~ 104 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTS-IDRD---GTKSGYDT---EMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAAS 104 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEE-TTTS---SCSSCCCH---HHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHHHCCCCEEEEEe-cCcc---cCCCcccH---HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhH
Confidence 45678888999999996621 1111 11112222 33444555568999999999999999999999999999998
Q ss_pred ccc
Q psy1056 461 LLA 463 (590)
Q Consensus 461 ~l~ 463 (590)
.+.
T Consensus 105 ~~~ 107 (266)
T 2w6r_A 105 VFH 107 (266)
T ss_dssp CC-
T ss_pred HHH
Confidence 876
No 286
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.80 E-value=0.0022 Score=62.84 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=53.0
Q ss_pred cHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 382 GYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
.+-++.+.++|+|+|.+..-. .. +. + ....+..+.+.++..++|+++.|||+++.++.++++.|||.|++|+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~-~~---~~--~-~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDIT-AS---VE--K-RKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESS-CS---SS--H-HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHcCCCEEEEECCc-hh---hc--C-CcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 456788899999998553111 11 11 1 11222334445555679999999999999999999999999999986
Q ss_pred cc
Q psy1056 462 LA 463 (590)
Q Consensus 462 l~ 463 (590)
+.
T Consensus 106 ~l 107 (253)
T 1thf_D 106 AV 107 (253)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 287
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.78 E-value=0.0017 Score=64.64 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhCCC-ceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhc--CCCcEE
Q psy1056 358 QIEMIKFIKKEYPD-MQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASR--RGVPVI 434 (590)
Q Consensus 358 ~l~~i~~i~~~~~~-vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~--~~v~ii 434 (590)
..+.++.+++.+|. .++++ ++.+.++++++.++|+|+|.+.. . .+..+.++.+.+.. .++|+.
T Consensus 168 ~~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~----~---------~~~~l~~~v~~l~~~~~~~~i~ 233 (273)
T 2b7n_A 168 LKSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDN----L---------SVLETKEIAAYRDAHYPFVLLE 233 (273)
T ss_dssp HHHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEET----C---------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhhccCCCcEEE
Confidence 35678888888865 46666 88899999999999999994421 1 23334444444332 248999
Q ss_pred ecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 435 ADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 435 a~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
++||| |...+..-.+.|||.+.+|+.+.
T Consensus 234 AsGGI-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 234 ASGNI-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp EESSC-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred EECCC-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 99999 89999999999999999998764
No 288
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.77 E-value=0.0095 Score=57.26 Aligned_cols=122 Identities=16% Similarity=-0.006 Sum_probs=78.0
Q ss_pred HHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEE--eccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 335 LKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVI--GGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi--~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
...+.+.|++.+.++...|. ..+...++.+++.. +...+. +-...+.+.++.+.+.|++.+.+....... .
T Consensus 75 ~~~~~~~Gad~vtVH~~~g~-~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~---~-- 148 (221)
T 3exr_A 75 AKNNAVRGADWMTCICSATI-PTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDAL---L-- 148 (221)
T ss_dssp HHHHHTTTCSEEEEETTSCH-HHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHH---H--
T ss_pred HHHHHHcCCCEEEEeccCCH-HHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcC---C--
Confidence 34478899999999887663 22344555555542 112222 223336778888888999877442111111 1
Q ss_pred ccc--chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 412 IGR--NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 412 ~g~--~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
.|. ++.-+..+++.+. .+.+|..+||| ++.++..+...|||.+++|+++..
T Consensus 149 ~Gvv~s~~e~~~ir~~~~-~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~~ 201 (221)
T 3exr_A 149 AGETWGEKDLNKVKKLIE-MGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGITE 201 (221)
T ss_dssp HTCCCCHHHHHHHHHHHH-HTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHHT
T ss_pred CccccCHHHHHHHHHhhc-CCceEEEECCC-CHHHHHHHHHCCCCEEEECchhhC
Confidence 133 4444555666553 35889999999 667888899999999999998753
No 289
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=96.76 E-value=0.0026 Score=66.62 Aligned_cols=130 Identities=12% Similarity=0.027 Sum_probs=81.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCCC--------------------c----hhhHHHHHHHHHHhCCCceEEecccc------
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQG--------------------N----SIYQIEMIKFIKKEYPDMQVIGGNVL------ 380 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G--------------------~----~~~~l~~i~~i~~~~~~vpvi~g~v~------ 380 (590)
..+.+....++|.|.|.|+.++| . .++.++.++.+++..+.-||.++=-.
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g 249 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQN 249 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCC
Confidence 45667778899999999997552 1 13457888888888754465543111
Q ss_pred -----C--------cHHHHHH---HHCC--CCEEEEcccccccCCCcc-ccccchhHHHHHHHHHhcCCCcEEecCCCCC
Q psy1056 381 -----F--------GYQPRAT---LLNF--IYQIEMIKFIKKEYPDMQ-VIGRNGTAVYRVAEYASRRGVPVIADGGVQS 441 (590)
Q Consensus 381 -----s--------~~~a~~l---~~~G--vd~i~v~~~~~~~~~~~~-~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~ 441 (590)
+ .+-+++| .++| +++|.|+-..+.. ... +-++....+..+++. .+.|+|+.|||.+
T Consensus 250 ~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~--~~~~~~~~~~~~~~~ir~~---~~~PvI~~Ggi~~ 324 (407)
T 3tjl_A 250 MKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSG--NVDVSEEDQAGDNEFVSKI---WKGVILKAGNYSY 324 (407)
T ss_dssp CCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEET--TEECCGGGCCCCSHHHHHH---CCSEEEEESCGGG
T ss_pred CcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCC--CCcCCccchhHHHHHHHHH---hCCCEEecCCCCC
Confidence 1 2345777 7889 9999774211111 000 000011122334443 3579999999999
Q ss_pred HHHHHHHHHc----CCCEEEECccccCC
Q psy1056 442 VGHVMKALAL----GASTAMMGSLLAGT 465 (590)
Q Consensus 442 ~~di~kalal----GA~~v~~g~~l~~~ 465 (590)
..|+.+++.. +||+|++|+.|..-
T Consensus 325 ~~dA~~~i~~~~~g~aDlVa~GR~~iaN 352 (407)
T 3tjl_A 325 DAPEFKTLKEDIADKRTLVGFSRYFTSN 352 (407)
T ss_dssp GTTTTHHHHHHHTTSSEEEECSHHHHHC
T ss_pred HHHHHHHHHhhccCCCeEEEeChhhhhC
Confidence 8887777775 59999999988654
No 290
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.73 E-value=0.0057 Score=61.62 Aligned_cols=89 Identities=10% Similarity=0.016 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G 437 (590)
+.+.++.+++..|..++.+ +|-|.+++++++++|+|+|.+.. - ++..+.++.+... .++++.+||
T Consensus 218 i~~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn----~---------~~~~l~~av~~l~-~~v~ieaSG 282 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDN----F---------SLEMMREAVKINA-GRAALENSG 282 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----C---------CHHHHHHHHHHHT-TSSEEEEES
T ss_pred HHHHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhC-CCCeEEEEC
Confidence 4577888888888777776 89999999999999999994421 1 3334455554443 359999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l 462 (590)
|| |...+..-.+.|+|.+.+|++.
T Consensus 283 GI-t~~~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 283 NI-TLDNLKECAETGVDYISVGALT 306 (320)
T ss_dssp SC-CHHHHHHHHTTTCSEEECTHHH
T ss_pred CC-CHHHHHHHHHcCCCEEEECcee
Confidence 99 7888877777899999999753
No 291
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.69 E-value=0.012 Score=55.92 Aligned_cols=111 Identities=13% Similarity=0.062 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCc-----------HHHHHHHHCCCCEEEEcc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFG-----------YQPRATLLNFIYQIEMIK 400 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~-----------~~a~~l~~~Gvd~i~v~~ 400 (590)
...++.+.++|+|.+.++...|. +.++.+++.. ++.+.... ... .-++...+.|++++.++.
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~g~-----~~i~~~~~~~-gv~vl~~t-~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~ 140 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFVGR-----DSVMAVKELG-EIIMVVEM-SHPGALEFINPLTDRFIEVANEIEPFGVIAPG 140 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTTCH-----HHHHHHHTTS-EEEEECCC-CSGGGGTTTGGGHHHHHHHHHHHCCSEEECCC
T ss_pred HHHHHHHHhcCCCEEEEeccCCH-----HHHHHHHHhC-CcEEEEec-CCcchhhHHHHHHHHHHHHHHHhCCcEEEECC
Confidence 44677788999999999887663 2366666553 45554431 111 124566678888882221
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCC-HHHHHHHHHcCCCEEEECccccC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQS-VGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~-~~di~kalalGA~~v~~g~~l~~ 464 (590)
. .+..+..+++.+. .-++|.+|||+. +.++.+++++|||.+.+||.+..
T Consensus 141 ~-------------~~~~i~~lr~~~~--~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~ 190 (208)
T 2czd_A 141 T-------------RPERIGYIRDRLK--EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYN 190 (208)
T ss_dssp S-------------STHHHHHHHHHSC--TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHT
T ss_pred C-------------ChHHHHHHHHhCC--CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhc
Confidence 1 2233445555542 135779999986 55899999999999999998854
No 292
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=96.68 E-value=0.0085 Score=58.54 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=71.7
Q ss_pred HHHHHHHHHcCCcEEEEec-CCCchhhHHHHHHHHHHhCCCceEE--eccccCcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 332 KNRLKLLSQAGVDVVILDS-SQGNSIYQIEMIKFIKKEYPDMQVI--GGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~-~~G~~~~~l~~i~~i~~~~~~vpvi--~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
...++.+.++|++.+.+-. +-.. ..+..+..++. ++..+ +....+.+..+++.+.+-.+|.+ ..+. |
T Consensus 106 e~F~~~~~~aGvdG~IipDLP~eE---~~~~~~~~~~~--Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~---Vs~~--G 175 (252)
T 3tha_A 106 EKFVKKAKSLGICALIVPELSFEE---SDDLIKECERY--NIALITLVSVTTPKERVKKLVKHAKGFIYL---LASI--G 175 (252)
T ss_dssp HHHHHHHHHTTEEEEECTTCCGGG---CHHHHHHHHHT--TCEECEEEETTSCHHHHHHHHTTCCSCEEE---ECCS--C
T ss_pred HHHHHHHHHcCCCEEEeCCCCHHH---HHHHHHHHHHc--CCeEEEEeCCCCcHHHHHHHHHhCCCeEEE---EecC--C
Confidence 3567888899999887633 2221 22333333333 33222 33444678888888887677633 1111 1
Q ss_pred cccccc-chhHHHHHHHHH-hcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 409 MQVIGR-NGTAVYRVAEYA-SRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 409 ~~~~g~-~~~~l~~~~~~~-~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
.+|... ....+.+..+.+ +..++|++..+||+++.++.++.. +||+|.+|+.|.
T Consensus 176 vTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiV 231 (252)
T 3tha_A 176 ITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIV 231 (252)
T ss_dssp SSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHH
T ss_pred CCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHH
Confidence 222211 112233332222 234699999999999999987655 799999999884
No 293
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.63 E-value=0.014 Score=56.32 Aligned_cols=116 Identities=17% Similarity=0.023 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCcEEEEecCCCch-hhHHHHHHHHHHh---CCCceE--Eecccc-CcH----HHHHHHHCCCCEEEEccc
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNS-IYQIEMIKFIKKE---YPDMQV--IGGNVL-FGY----QPRATLLNFIYQIEMIKF 401 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~-~~~l~~i~~i~~~---~~~vpv--i~g~v~-s~~----~a~~l~~~Gvd~i~v~~~ 401 (590)
..++..++.|++.+-+...-|.. ..+.+.+..+++. | +.|+ |+-... +.+ .++.+.++|+|+|+.+
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~-g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSY-GAVVKVILEAPLWDDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEEESC--
T ss_pred HHHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhc-CCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 46777888899998776654432 2455556665553 3 3554 542222 433 3345667999999332
Q ss_pred ccccCCCccc-cccchhHHHH--HHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 402 IKKEYPDMQV-IGRNGTAVYR--VAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 402 ~~~~~~~~~~-~g~~~~~l~~--~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
.. |.+ .|.+...+.. .++.. ++||-++|||++..|+.+.+.+||+-+...
T Consensus 169 --TG---~~~~~gAt~~dv~l~~m~~~v---~v~VKaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 169 --TG---VYTKGGDPVTVFRLASLAKPL---GMGVKASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp --CS---SSCCCCSHHHHHHHHHHHGGG---TCEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred --CC---CCCCCCCCHHHHHHHHHHHHH---CCCEEEecCCCCHHHHHHHHHcCccccchH
Confidence 11 322 2324444444 44333 299999999999999999999999955443
No 294
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.63 E-value=0.0073 Score=59.30 Aligned_cols=115 Identities=16% Similarity=0.101 Sum_probs=73.4
Q ss_pred HHHHHHHHcCCcEEEEecC-----CCchhhHHHHHHHHHHhCC--Cce--EEecccc--CcH----HHHHHHHCCCCEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS-----QGNSIYQIEMIKFIKKEYP--DMQ--VIGGNVL--FGY----QPRATLLNFIYQIE 397 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-----~G~~~~~l~~i~~i~~~~~--~vp--vi~g~v~--s~~----~a~~l~~~Gvd~i~ 397 (590)
..++..++.|++-+-+... .|+...+.+.+..+++..+ +.| +|+-... +.+ .++.+.++|+|+|+
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEE
Confidence 4567788889998765443 4566667777777776432 233 3542222 333 34567779999993
Q ss_pred EcccccccCCCccccccchhHHHHHHHHHh----cCCCcEEecCCCCCHHHHHHHHHcCCC
Q psy1056 398 MIKFIKKEYPDMQVIGRNGTAVYRVAEYAS----RRGVPVIADGGVQSVGHVMKALALGAS 454 (590)
Q Consensus 398 v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~----~~~v~iia~GGi~~~~di~kalalGA~ 454 (590)
.| - ||...|.|+..+...++..+ ..+++|-++|||||..|+.+-+.+||+
T Consensus 169 TS----T---Gf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 169 TS----T---GKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp CC----C---SCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred eC----C---CCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 32 1 13322336665555554422 235999999999999999999999886
No 295
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=96.60 E-value=0.011 Score=61.22 Aligned_cols=129 Identities=11% Similarity=-0.016 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc--------------------h----hhHHHHHHHHHHhCCCceEEec--------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN--------------------S----IYQIEMIKFIKKEYPDMQVIGG-------- 377 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~--------------------~----~~~l~~i~~i~~~~~~vpvi~g-------- 377 (590)
...+.+....++|.|.|.|+.+||+ . ++.++.++.+++..++-++.+.
T Consensus 153 ~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~ 232 (358)
T 4a3u_A 153 DYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQ 232 (358)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccC
Confidence 3445677888999999999976531 1 3457889999988765455432
Q ss_pred cccC-------cHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH
Q psy1056 378 NVLF-------GYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA 450 (590)
Q Consensus 378 ~v~s-------~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala 450 (590)
+..+ .+.++.+.++|++++.++...... ..+.+........+++. ...|+++ ||+.++..+.++|+
T Consensus 233 g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~a~~ik~~---~~~~v~~-~g~~~~~~ae~~l~ 305 (358)
T 4a3u_A 233 GTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDG---TFGKTDQPKLSPEIRKV---FKPPLVL-NQDYTFETAQAALD 305 (358)
T ss_dssp TBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTC---SSSBCSSCCCHHHHHHH---CCSCEEE-ESSCCHHHHHHHHH
T ss_pred CCcccchHHHHHHHHHhhhccCccccccccccccC---cccccccHHHHHHHHHh---cCCcEEE-eCCCCHHHHHHHHH
Confidence 1111 123567778999999774222111 11112222222334433 2356664 78889999999999
Q ss_pred cC-CCEEEECccccCC
Q psy1056 451 LG-ASTAMMGSLLAGT 465 (590)
Q Consensus 451 lG-A~~v~~g~~l~~~ 465 (590)
-| ||+|.+|++|..-
T Consensus 306 ~G~aD~V~~gR~~lad 321 (358)
T 4a3u_A 306 SGVADAISFGRPFIGN 321 (358)
T ss_dssp HTSCSEEEESHHHHHC
T ss_pred cCCceEeHhhHHHHhC
Confidence 99 9999999988644
No 296
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.59 E-value=0.0059 Score=60.83 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhc--CCCcEEe
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASR--RGVPVIA 435 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~--~~v~iia 435 (590)
+...++..++.+|..++.+ ++.+.++++++.++|+|+|-+.. . +++.+.++.+.+.. .++++.+
T Consensus 181 i~~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn----~---------~~~~~~~~v~~l~~~~~~v~iea 246 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDN----F---------AVWQTQTAVQRRDSRAPTVMLES 246 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEET----C---------CHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhhccCCCeEEEE
Confidence 4567888888887666666 89999999999999999883311 1 33334444444333 2589999
Q ss_pred cCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 436 DGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 436 ~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+||| |+..+..-...|+|.+.+|++..
T Consensus 247 SGGI-t~~~i~~~a~tGVD~isvG~l~~ 273 (284)
T 1qpo_A 247 SGGL-SLQTAATYAETGVDYLAVGALTH 273 (284)
T ss_dssp ESSC-CTTTHHHHHHTTCSEEECGGGTS
T ss_pred ECCC-CHHHHHHHHhcCCCEEEECHHHc
Confidence 9999 78888888889999999998663
No 297
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=96.57 E-value=0.0014 Score=63.96 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=52.8
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+.++.+.++|+|+|.++-- ... ..+.+.... .+++.+ ..++|+++.|||++..++.++++.|||.|++|+
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~-~~~---~~~~~~~~~---~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 103 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDL-SNA---IENSGENLP---VLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSS 103 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEH-HHH---HHCCCTTHH---HHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEecc-ccc---ccCCchhHH---HHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECc
Confidence 456788899999999965211 000 001111322 334433 456999999999999999999999999999998
Q ss_pred cccC
Q psy1056 461 LLAG 464 (590)
Q Consensus 461 ~l~~ 464 (590)
.+..
T Consensus 104 ~~l~ 107 (241)
T 1qo2_A 104 KVLE 107 (241)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 7643
No 298
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.55 E-value=0.013 Score=59.07 Aligned_cols=119 Identities=14% Similarity=0.057 Sum_probs=71.5
Q ss_pred HHHHHHcCCcEEEEecCCC--c-hhhHHHHHHHHH---HhCCCceEEec------cccC--------cHHHHHHHHCCCC
Q psy1056 335 LKLLSQAGVDVVILDSSQG--N-SIYQIEMIKFIK---KEYPDMQVIGG------NVLF--------GYQPRATLLNFIY 394 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G--~-~~~~l~~i~~i~---~~~~~vpvi~g------~v~s--------~~~a~~l~~~Gvd 394 (590)
++..++.|++++.+...-+ + ....++.++.+. ..+ ++|+++- .+.. .+.++.+.+.|+|
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~-G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSN-GLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHc-CCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 4567788999987544211 1 233344444433 345 7887642 2221 2247788889999
Q ss_pred EEEEcccccccCCCccccccchhHHHHHHHHHhc-CCCc-EEecCCCCCHH----HHHHHHHcCCCEEEECcccc
Q psy1056 395 QIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASR-RGVP-VIADGGVQSVG----HVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 395 ~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~-~~v~-iia~GGi~~~~----di~kalalGA~~v~~g~~l~ 463 (590)
++++..... . + | +...+.++.+.... .++| |+++||+ +.. .+..|+..||+.|.+||.+.
T Consensus 193 ~iKv~~~~~-~---~---g-~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~ 258 (304)
T 1to3_A 193 LYKVEMPLY-G---K---G-ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVW 258 (304)
T ss_dssp EEEECCGGG-G---C---S-CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHH
T ss_pred EEEeCCCcC-C---C---C-CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHh
Confidence 996633111 1 0 1 23334444333222 4799 9999999 563 37788899999999998773
No 299
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.53 E-value=0.011 Score=56.59 Aligned_cols=121 Identities=12% Similarity=0.036 Sum_probs=75.6
Q ss_pred HHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE---eccccCcHHHHHHHHCCCCEEEEcccccccCCCccc
Q psy1056 335 LKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI---GGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQV 411 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi---~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~ 411 (590)
++.+.+.|+|.+.++...|.. .+...++.+++. +.++. .+.+. ...+..+.+.|.+.+.+.........|+.|
T Consensus 73 ~~~~~~~Gad~itvh~~~g~~-~l~~~~~~~~~~--g~~~~~~ll~~~t-~~~~~~l~~~~~~~~vl~~a~~~~~~G~~g 148 (216)
T 1q6o_A 73 SRMCFEANADWVTVICCADIN-TAKGALDVAKEF--NGDVQIELTGYWT-WEQAQQWRDAGIGQVVYHRSRDAQAAGVAW 148 (216)
T ss_dssp HHHHHHTTCSEEEEETTSCHH-HHHHHHHHHHHT--TCEEEEEECSCCC-HHHHHHHHHTTCCEEEEECCHHHHHTTCCC
T ss_pred HHHHHhCCCCEEEEeccCCHH-HHHHHHHHHHHc--CCCceeeeeeCCC-hhhHHHHHhcCcHHHHHHHHHHHHhcCCCC
Confidence 447888999999998876532 233455555554 45532 21222 556677777887766331100000011221
Q ss_pred cccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccC
Q psy1056 412 IGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 412 ~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~ 464 (590)
++..+..+++.+. .+.|++++|||+ +..+.+++..|||.+.+|+.+..
T Consensus 149 ---~~~~i~~lr~~~~-~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 149 ---GEADITAIKRLSD-MGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRD 196 (216)
T ss_dssp ---CHHHHHHHHHHHH-TTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHT
T ss_pred ---CHHHHHHHHHhcC-CCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcC
Confidence 2444556666553 358899999997 77788999999999999998854
No 300
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.52 E-value=0.0028 Score=63.84 Aligned_cols=90 Identities=11% Similarity=-0.000 Sum_probs=66.9
Q ss_pred HHHHHHHHHhCCC-ceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhc--CCCcEEe
Q psy1056 359 IEMIKFIKKEYPD-MQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASR--RGVPVIA 435 (590)
Q Consensus 359 l~~i~~i~~~~~~-vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~--~~v~iia 435 (590)
.+.++.+++.+|. .++++ ++.+.++++++.++|+|+|.+.. . .+..+.++.+.+.. .++||.+
T Consensus 184 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~----~---------~~~~l~~~v~~l~~~~~~~~I~A 249 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDN----F---------KPEELHPTATVLKAQFPSVAVEA 249 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----C---------CHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhhccCCCeeEEE
Confidence 5677778877754 56666 88899999999999999994421 1 23334444444432 2389999
Q ss_pred cCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 436 DGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 436 ~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+||| |...+..-.+.|||.+.+|+++.
T Consensus 250 SGGI-t~~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 250 SGGI-TLDNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp ESSC-CTTTHHHHCCTTCCEEECTHHHH
T ss_pred ECCC-CHHHHHHHHHCCCCEEEEChhhc
Confidence 9999 99999988899999999998663
No 301
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.51 E-value=0.0072 Score=59.98 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G 437 (590)
+.+.++..++..|..++.+ +|.|.++++++.++|+|+|-+.. - ++..+.++.+... .++++.+||
T Consensus 185 i~~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn----~---------~~~~l~~av~~~~-~~v~ieaSG 249 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDN----F---------SGEDIDIAVSIAR-GKVALEVSG 249 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----C---------CHHHHHHHHHHHT-TTCEEEEES
T ss_pred HHHHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcC----C---------CHHHHHHHHHhhc-CCceEEEEC
Confidence 4567777787777788877 99999999999999999993321 1 3333444444443 258999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l 462 (590)
|| |...+..-...|+|.+.+|.+.
T Consensus 250 GI-t~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 250 NI-DRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp SC-CTTTHHHHHTTTCSEEECSHHH
T ss_pred CC-CHHHHHHHHHcCCCEEEEChhh
Confidence 99 7778877777899999998765
No 302
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.51 E-value=0.0024 Score=64.18 Aligned_cols=90 Identities=10% Similarity=0.041 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCCC-ceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcC-----CC
Q psy1056 358 QIEMIKFIKKEYPD-MQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRR-----GV 431 (590)
Q Consensus 358 ~l~~i~~i~~~~~~-vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~-----~v 431 (590)
+.+.++.+++.+|. .++++ ++.+.++++++.++|+|+|.+.. + .+..+.++.+..... ++
T Consensus 185 i~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~-----------~--~~~~l~~~v~~l~~~~~g~~~v 250 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDN-----------F--KGDGLKMCAQSLKNKWNGKKHF 250 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC----------------------------------CC
T ss_pred HHHHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECC-----------C--CHHHHHHHHHHhcccccCCCCe
Confidence 45677888887764 56666 88899999999999999994321 1 122233333333221 28
Q ss_pred cEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 432 PVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 432 ~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
||.++||| |...+..-...|||.+.+|+.+
T Consensus 251 ~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 251 LLECSGGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp EEEEECCC-CC------CCCSCSEEECGGGT
T ss_pred EEEEECCC-CHHHHHHHHHcCCCEEEEechh
Confidence 99999999 9999998888999999999876
No 303
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.48 E-value=0.016 Score=55.91 Aligned_cols=110 Identities=11% Similarity=-0.031 Sum_probs=69.9
Q ss_pred CcEEEEecCCCchhhHHHHHH---HHHHhCCCceEEe-ccccC-cHHHHHHHHCC-CCEEEE-cccccccCCCcccccc-
Q psy1056 343 VDVVILDSSQGNSIYQIEMIK---FIKKEYPDMQVIG-GNVLF-GYQPRATLLNF-IYQIEM-IKFIKKEYPDMQVIGR- 414 (590)
Q Consensus 343 ad~i~V~~~~G~~~~~l~~i~---~i~~~~~~vpvi~-g~v~s-~~~a~~l~~~G-vd~i~v-~~~~~~~~~~~~~~g~- 414 (590)
++.+.++...... .....++ .+++. +..+.+ =+..| .+..+.+.++| +|+|-+ +++.+ |.|..+
T Consensus 86 Ad~itvH~ea~~~-~~~~~i~~~~~i~~~--G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pG-----f~gq~f~ 157 (227)
T 1tqx_A 86 SNQLTFHFEALNE-DTERCIQLAKEIRDN--NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPG-----FGGQSFM 157 (227)
T ss_dssp SSEEEEEGGGGTT-CHHHHHHHHHHHHTT--TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTT-----CSSCCCC
T ss_pred CCEEEEeecCCcc-CHHHHHHHHHHHHHc--CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccC-----CCCcccc
Confidence 8888887654320 2344555 66665 333322 24444 45667777776 999955 54433 333222
Q ss_pred --chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 415 --NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 415 --~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+..-+.++++... +++|.++|||. ...+.++.+.|||.+++|+.+.
T Consensus 158 ~~~l~ki~~lr~~~~--~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 158 HDMMGKVSFLRKKYK--NLNIQVDGGLN-IETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp GGGHHHHHHHHHHCT--TCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHH
T ss_pred hHHHHHHHHHHHhcc--CCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHh
Confidence 2333444444432 68999999994 7899999999999999999874
No 304
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.43 E-value=0.0031 Score=62.88 Aligned_cols=91 Identities=11% Similarity=-0.046 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhCCC-ceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhc--CCCcEE
Q psy1056 358 QIEMIKFIKKEYPD-MQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASR--RGVPVI 434 (590)
Q Consensus 358 ~l~~i~~i~~~~~~-vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~--~~v~ii 434 (590)
+...++..++..|. .++.+ +|.|.++++++.++|+|+|-+.. - +++.+.++.+.... .++|+.
T Consensus 179 i~~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn----~---------~~e~l~~av~~l~~~~~~v~ie 244 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDN----L---------SPEEVKDISRRIKDINPNVIVE 244 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----C---------CHHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhhccCCCceEE
Confidence 45678888888765 57766 88999999999999999993321 1 33344444444432 258999
Q ss_pred ecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 435 ADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 435 a~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
++||| |...+..-.+.|+|.+.+|++..
T Consensus 245 ASGGI-t~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 245 VSGGI-TEENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp EEECC-CTTTGGGGCCTTCCEEEEGGGTS
T ss_pred EECCC-CHHHHHHHHHcCCCEEEEeHHHc
Confidence 99999 77788877788999999998663
No 305
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=96.33 E-value=0.0079 Score=60.01 Aligned_cols=89 Identities=15% Similarity=0.025 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G 437 (590)
+.+.++.+++..|..++.+ +|-|.+++++++++|+|+|.+.. - ++..+.++.+... .++++.+||
T Consensus 196 i~~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn----~---------~~~~l~~av~~i~-~~v~ieaSG 260 (298)
T 3gnn_A 196 VGEALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDN----F---------TLDMMRDAVRVTE-GRAVLEVSG 260 (298)
T ss_dssp HHHHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEES----C---------CHHHHHHHHHHHT-TSEEEEEES
T ss_pred HHHHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECC----C---------CHHHHHHHHHHhC-CCCeEEEEc
Confidence 4577888888887777666 78999999999999999993321 0 2333444444332 358999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l 462 (590)
|| |...+..-...|+|++.+|+..
T Consensus 261 GI-~~~~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 261 GV-NFDTVRAIAETGVDRISIGALT 284 (298)
T ss_dssp SC-STTTHHHHHHTTCSEEECGGGG
T ss_pred CC-CHHHHHHHHHcCCCEEEECCee
Confidence 99 7777877777899999999854
No 306
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.31 E-value=0.0055 Score=59.63 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=53.3
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+.++.+.++|+|+|.++.-. .. + .+ ....+..+++..+..++|+++.||++++.++.+++++|||+|.+|+
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~-~~---~--~~-~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDIT-AA---P--EG-RATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECC-CC---T--TT-HHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHHHcCCCEEEEEeCC-cc---c--cC-CcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 4577888999999988653111 11 0 01 1112223344444557999999999999999999999999999997
Q ss_pred ccc
Q psy1056 461 LLA 463 (590)
Q Consensus 461 ~l~ 463 (590)
.+.
T Consensus 108 ~~~ 110 (253)
T 1h5y_A 108 AAV 110 (253)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 307
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.30 E-value=0.012 Score=58.59 Aligned_cols=89 Identities=13% Similarity=0.087 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG 437 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G 437 (590)
+.+.++.+++..|..++.+ +|.|.+++++++++|+|.|-+.. + ++..+.++.+.... ++.+.+||
T Consensus 194 i~~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn--------~-----s~~~l~~av~~~~~-~v~leaSG 258 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDN--------M-----SISEIKKAVDIVNG-KSVLEVSG 258 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEES--------C-----CHHHHHHHHHHHTT-SSEEEEES
T ss_pred HHHHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECC--------C-----CHHHHHHHHHhhcC-ceEEEEEC
Confidence 4577888888888788777 99999999999999999993321 1 33344444444432 58999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 438 GVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 438 Gi~~~~di~kalalGA~~v~~g~~l 462 (590)
|| |...+..-...|+|++.+|.+.
T Consensus 259 GI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 259 CV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp SC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred CC-CHHHHHHHHHcCCCEEEeCccc
Confidence 99 7777776666799999999765
No 308
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.28 E-value=0.036 Score=53.49 Aligned_cols=109 Identities=13% Similarity=0.104 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--cc------c-c--CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GN------V-L--FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~------v-~--s~~~a~~l~~~Gvd~i~v 398 (590)
...+.+....++|+..+.+.. .+.++.+++.. ++|++. +. + . +.++++.+.++|+|+|.+
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~~--------~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l 107 (229)
T 3q58_A 37 IVAAMAQAAASAGAVAVRIEG--------IENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAF 107 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEEES--------HHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEEEECC--------HHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEE
Confidence 455678888899999987631 56788888887 789872 21 2 2 456899999999998833
Q ss_pred cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 399 IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
.++.+. .+..+.++.+.+++.++++++ .+.|..++.+|..+|||++.+.
T Consensus 108 -~~~~~~---------~p~~l~~~i~~~~~~g~~v~~--~v~t~eea~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 108 -DASFRS---------RPVDIDSLLTRIRLHGLLAMA--DCSTVNEGISCHQKGIEFIGTT 156 (229)
T ss_dssp -ECCSSC---------CSSCHHHHHHHHHHTTCEEEE--ECSSHHHHHHHHHTTCSEEECT
T ss_pred -CccccC---------ChHHHHHHHHHHHHCCCEEEE--ecCCHHHHHHHHhCCCCEEEec
Confidence 122211 223344555555566788888 7899999999999999999653
No 309
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.26 E-value=0.025 Score=54.88 Aligned_cols=115 Identities=11% Similarity=0.005 Sum_probs=85.6
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEEcccccccCCCcc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEMIKFIKKEYPDMQ 410 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~ 410 (590)
.+.++ ..++|+.++.|-+-..+..|-++.+..+++.. ++|++.|+.. ++.+..++..+|||+|-+ +....
T Consensus 67 ~~iA~-~~~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v-~lPvLrKDFiid~yQI~eAr~~GADaILL-I~a~L------ 137 (258)
T 4a29_A 67 IEYAK-FMERYAVGLSITTEEKYFNGSYETLRKIASSV-SIPILMSDFIVKESQIDDAYNLGADTVLL-IVKIL------ 137 (258)
T ss_dssp HHHHH-HHTTTCSEEEEECCSTTTCCCHHHHHHHHTTC-SSCEEEESCCCSHHHHHHHHHHTCSEEEE-EGGGS------
T ss_pred HHHHH-HHhCCCeEEEEeCCCCCCCCCHHHHHHHHHhc-CCCEeeccccccHHHHHHHHHcCCCeeeh-HHhhc------
Confidence 34443 44689999998876655556677888888877 7999999855 999999999999999943 11111
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 411 VIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 411 ~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
+...+.++.+.+...|+.++. =+.|..++-+|+.+||+.+++-.+
T Consensus 138 ----~~~~l~~l~~~A~~lGl~~Lv--EVh~~~El~rAl~~~a~iIGINNR 182 (258)
T 4a29_A 138 ----TERELESLLEYARSYGMEPLI--LINDENDLDIALRIGARFIGIMSR 182 (258)
T ss_dssp ----CHHHHHHHHHHHHHTTCCCEE--EESSHHHHHHHHHTTCSEEEECSB
T ss_pred ----CHHHHHHHHHHHHHHhHHHHH--hcchHHHHHHHhcCCCcEEEEeCC
Confidence 223355666666777887777 589999999999999999977643
No 310
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.21 E-value=0.042 Score=53.09 Aligned_cols=109 Identities=17% Similarity=0.096 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--cc------c---cCcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GN------V---LFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~------v---~s~~~a~~l~~~Gvd~i~v 398 (590)
...+.+....+.|+..+.+.. .+.++.+++.. ++|++. +. + .+.++++.+.++|+|+|.+
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~~--------~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l 107 (232)
T 3igs_A 37 IVAAMALAAEQAGAVAVRIEG--------IDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHHHTTCSEEEEES--------HHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHHCCCeEEEECC--------HHHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEE
Confidence 456678888899999987631 46788888887 789862 21 2 2456899999999998843
Q ss_pred cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 399 IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
. ++.+. .+..+.++.+.+++.++++++ .+.|..++.+|..+|||++.++
T Consensus 108 ~-~~~~~---------~p~~l~~~i~~~~~~g~~v~~--~v~t~eea~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 108 D-GTARQ---------RPVAVEALLARIHHHHLLTMA--DCSSVDDGLACQRLGADIIGTT 156 (232)
T ss_dssp E-CCSSC---------CSSCHHHHHHHHHHTTCEEEE--ECCSHHHHHHHHHTTCSEEECT
T ss_pred C-ccccC---------CHHHHHHHHHHHHHCCCEEEE--eCCCHHHHHHHHhCCCCEEEEc
Confidence 1 11111 223344555555566788888 7899999999999999999653
No 311
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.20 E-value=0.0096 Score=57.87 Aligned_cols=75 Identities=19% Similarity=0.135 Sum_probs=52.7
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+.++.+.++|+|+|-+...... +.+ ..+. ..+.+.++..++|++..|||+++.++..++++|||.|.+|+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~----~~~-~~~~---~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAA----FGR-GSNH---ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGT 104 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHH----TTS-CCCH---HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEEcCccc----ccC-CChH---HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECc
Confidence 356778889999999966321111 111 1122 23344444557999999999999999999999999999997
Q ss_pred ccc
Q psy1056 461 LLA 463 (590)
Q Consensus 461 ~l~ 463 (590)
.+.
T Consensus 105 ~~l 107 (244)
T 2y88_A 105 AAL 107 (244)
T ss_dssp HHH
T ss_pred hHh
Confidence 653
No 312
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.20 E-value=0.035 Score=54.26 Aligned_cols=115 Identities=9% Similarity=0.032 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
+..+.+....+. +..+.|.+-..+..+-.+.+..+++.. ++|++.|+-. +..+...+..+|||+|-+- ++.+
T Consensus 62 ~~~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~v-~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi-~a~l---- 134 (251)
T 1i4n_A 62 SLEDFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARNLT-CRPILAKDFYIDTVQVKLASSVGADAILII-ARIL---- 134 (251)
T ss_dssp CHHHHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHTTC-CSCEEEECCCCSTHHHHHHHHTTCSEEEEE-GGGS----
T ss_pred CHHHHHHHHHHh-CCceEEEecccccCCCHHHHHHHHHhC-CCCEEEeeCCCCHHHHHHHHHcCCCEEEEe-cccC----
Confidence 445667777777 888888765544455567788888876 7999988755 6677888999999999441 2211
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHc-CCCEEEEC
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALAL-GASTAMMG 459 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalal-GA~~v~~g 459 (590)
+...+.++.+.+...|..+++ =+.|..++.+|+.+ ||+.+++=
T Consensus 135 ------~~~~l~~l~~~a~~lGl~~lv--Ev~~~eE~~~A~~l~g~~iIGin 178 (251)
T 1i4n_A 135 ------TAEQIKEIYEAAEELGMDSLV--EVHSREDLEKVFSVIRPKIIGIN 178 (251)
T ss_dssp ------CHHHHHHHHHHHHTTTCEEEE--EECSHHHHHHHHTTCCCSEEEEE
T ss_pred ------CHHHHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHhcCCCCEEEEe
Confidence 223456666677777888888 67899999999999 99998554
No 313
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.12 E-value=0.0076 Score=58.69 Aligned_cols=75 Identities=16% Similarity=0.096 Sum_probs=52.4
Q ss_pred CcHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 381 FGYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
..+.++.+.++|+|+|-+..... . +. +. ... ..+.+.++..++|++..|||+++.++..++.+|||.|.+|+
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~-~---~~--~~-~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDA-A---FG--TG-DNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHH-H---HT--SC-CCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEecCch-h---hc--CC-ChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECc
Confidence 34667888999999996632111 0 11 11 111 23344444557999999999999999999999999999997
Q ss_pred ccc
Q psy1056 461 LLA 463 (590)
Q Consensus 461 ~l~ 463 (590)
...
T Consensus 106 ~~l 108 (244)
T 1vzw_A 106 AAL 108 (244)
T ss_dssp HHH
T ss_pred hHh
Confidence 553
No 314
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.94 E-value=0.013 Score=58.84 Aligned_cols=111 Identities=14% Similarity=0.174 Sum_probs=76.4
Q ss_pred HHHHHHHHcCCcEEEEec--------CCC-chhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEEcccc
Q psy1056 333 NRLKLLSQAGVDVVILDS--------SQG-NSIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEMIKFI 402 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~--------~~G-~~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v~~~~ 402 (590)
+.++.--++|++.+.+-. .+| .+....+.++.+++.. ++|++++ .+...+.++.+.++|||+|+.+-..
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD~Id~s~~~ 110 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVDMLDESEVL 110 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCSEEEEETTS
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCCEEEcCCCC
Confidence 556777788999887762 223 2222578888999887 8999986 4556899999999999999432110
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
+.. ..+..+.+ ...++++++ +++|..++.+++.+||+.+.+.
T Consensus 111 ~~~-----------~li~~i~~--~~~g~~vvv--~v~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 111 TMA-----------DEYNHINK--HKFKTPFVC--GCTNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp CCS-----------CSSCCCCG--GGCSSCEEE--EESSHHHHHHHHHHTCSEEEEC
T ss_pred CHH-----------HHHHHHHh--cCCCCeEEE--EeCCHHHHHHHHhCCCCEEEEC
Confidence 110 00011111 124688998 7999999999999999999665
No 315
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=95.79 E-value=0.082 Score=50.55 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC--CceEEeccccC----------cHHHHHHHHCCCCEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP--DMQVIGGNVLF----------GYQPRATLLNFIYQI 396 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~--~vpvi~g~v~s----------~~~a~~l~~~Gvd~i 396 (590)
.+..+..+...+.+++.++++.. ++. ..++.+. ++++.. -++. ..+++++++.|||.|
T Consensus 19 ~~i~~l~~~a~~~~~~aVcv~p~------~v~---~~~~~l~~~~v~v~~-vigFP~G~~~~~~k~~e~~~Ai~~GAdev 88 (220)
T 1ub3_A 19 EEVAKAAEEALEYGFYGLCIPPS------YVA---WVRARYPHAPFRLVT-VVGFPLGYQEKEVKALEAALACARGADEV 88 (220)
T ss_dssp HHHHHHHHHHHHHTCSEEECCGG------GHH---HHHHHCTTCSSEEEE-EESTTTCCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECHH------HHH---HHHHHhCCCCceEEE-EecCCCCCCchHHHHHHHHHHHHcCCCEE
Confidence 34555677788889999987442 122 2222222 344331 1121 257889999999999
Q ss_pred EEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHH----HHHcCCCEEEE
Q psy1056 397 EMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 397 ~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~k----alalGA~~v~~ 458 (590)
|+-+..+..++ ..|.....-+..+.+.|....+|+|..-+..+..++.+ |..+|||+|=-
T Consensus 89 d~vinig~~~~--g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKT 152 (220)
T 1ub3_A 89 DMVLHLGRAKA--GDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKT 152 (220)
T ss_dssp EEECCHHHHHT--TCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred EecccchhhhC--CCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 98443332100 11222344455666666555689999889999998887 45579999933
No 316
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.66 E-value=0.064 Score=54.37 Aligned_cols=126 Identities=18% Similarity=0.129 Sum_probs=68.2
Q ss_pred HHHHHHcCCcEEEEecC---CCchh---hHHHHHHHH---HHhCCCceEEe-----cc-cc---C-----------cHHH
Q psy1056 335 LKLLSQAGVDVVILDSS---QGNSI---YQIEMIKFI---KKEYPDMQVIG-----GN-VL---F-----------GYQP 385 (590)
Q Consensus 335 ~~~li~~gad~i~V~~~---~G~~~---~~l~~i~~i---~~~~~~vpvi~-----g~-v~---s-----------~~~a 385 (590)
++.+++.|+|++-+... +.... ..+..+..+ ...+ ++|+++ .. +. + ...+
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~-GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~ 194 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAE-DIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAM 194 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHc-CCceEEEEeccCCCCCCCcchhhhccCHHHHHHHH
Confidence 56678899998876542 21111 122333322 2333 677664 21 11 1 1234
Q ss_pred HHH--HHCCCCEEEEcccccccC-CCccc--ccc-chhHHHHHHHHHhcCCCcEE-ecCCCCCHHHHH----HHHHcCC-
Q psy1056 386 RAT--LLNFIYQIEMIKFIKKEY-PDMQV--IGR-NGTAVYRVAEYASRRGVPVI-ADGGVQSVGHVM----KALALGA- 453 (590)
Q Consensus 386 ~~l--~~~Gvd~i~v~~~~~~~~-~~~~~--~g~-~~~~l~~~~~~~~~~~v~ii-a~GGi~~~~di~----kalalGA- 453 (590)
+.+ .+.|+|.+++........ .||.+ .-+ ..++...+++......+|+| .+||. +..+.. -|+..||
T Consensus 195 R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~~A~~aGa~ 273 (332)
T 3iv3_A 195 KVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLVFAHKAGAK 273 (332)
T ss_dssp HHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHHHHHHHTCC
T ss_pred HHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHHHHHHcCCC
Confidence 555 467999998832221110 01111 122 23333345555555679965 69998 454444 4777899
Q ss_pred -CEEEECccc
Q psy1056 454 -STAMMGSLL 462 (590)
Q Consensus 454 -~~v~~g~~l 462 (590)
..|.+||..
T Consensus 274 f~Gv~~GRnv 283 (332)
T 3iv3_A 274 FNGVLCGRAT 283 (332)
T ss_dssp CCEEEECHHH
T ss_pred cceEEeeHHH
Confidence 999999876
No 317
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.62 E-value=0.075 Score=56.32 Aligned_cols=115 Identities=10% Similarity=0.047 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEEcccccccCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEMIKFIKKEYPD 408 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v~~~~~~~~~~ 408 (590)
+..+.+....+. +..+.+.+-..+..+-.+.+..+++.. ++|++.|+-. +..+..++..+|||+|-+ +++.+
T Consensus 69 ~~~~iA~~y~~~-A~~IsvLTd~~~F~gs~~dL~~vr~~v-~lPvLrKDFI~d~~Qi~ea~~~GAD~ILL-i~a~l---- 141 (452)
T 1pii_A 69 DPARIAAIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQIA-PQPILCKDFIIDPYQIYLARYYQADACLL-MLSVL---- 141 (452)
T ss_dssp CHHHHHHHHTTT-CSEEEEECCSTTTCCCTTHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEE-ETTTC----
T ss_pred CHHHHHHHHHhh-CcEEEEEecccccCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHcCCCEEEE-EcccC----
Confidence 345566666666 999988776544445567788888887 7999988765 677888899999999943 12211
Q ss_pred ccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 409 MQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 409 ~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
+...+.++.+.+...++.+++ =++|..++.+|+.+||+.+++=
T Consensus 142 ------~~~~l~~l~~~a~~lgm~~Lv--Evh~~eE~~~A~~lga~iIGin 184 (452)
T 1pii_A 142 ------DDDQYRQLAAVAHSLEMGVLT--EVSNEEEQERAIALGAKVVGIN 184 (452)
T ss_dssp ------CHHHHHHHHHHHHHTTCEEEE--EECSHHHHHHHHHTTCSEEEEE
T ss_pred ------CHHHHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHHCCCCEEEEe
Confidence 223456666666677888898 6889999999999999998765
No 318
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=95.53 E-value=0.026 Score=53.81 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=48.6
Q ss_pred HHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 383 YQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 383 ~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
+-++++...|+..+.+ .+ +.. -++-|.. ...+.+.....++|+|+.||+.++.++.+++..||+++++|++
T Consensus 134 ~~i~~~~~~~~~~vli~~~--~~~---g~~~g~~---~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a 205 (237)
T 3cwo_X 134 DWVVEVEKRGAGEILLTSI--DRD---GTKSGYD---TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASV 205 (237)
T ss_dssp HHHHHHHHHTCSEEEEEET--TTT---TCCSCCC---HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHhhcCCCeEEEEec--CCC---Ccccccc---HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHH
Confidence 4456666777775522 21 111 0111222 2234444445579999999999999999999999999999998
Q ss_pred c
Q psy1056 462 L 462 (590)
Q Consensus 462 l 462 (590)
|
T Consensus 206 ~ 206 (237)
T 3cwo_X 206 F 206 (237)
T ss_dssp H
T ss_pred H
Confidence 8
No 319
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.48 E-value=0.17 Score=48.17 Aligned_cols=114 Identities=16% Similarity=0.094 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe---c---c--c---cCcHHHHHHHHCCCCEEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG---G---N--V---LFGYQPRATLLNFIYQIE 397 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~---g---~--v---~s~~~a~~l~~~Gvd~i~ 397 (590)
....+.+..+.++|++.++++. .+.++.+++.. +.|++. + + + .+.+.++.+.++|+|++.
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~~--------~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~ 93 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRANT--------KEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIA 93 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEES--------HHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred ccHHHHHHHHHHCCCeeeccCC--------HHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEE
Confidence 3456788888899999998742 35688888877 788852 1 1 1 245788899999999985
Q ss_pred EcccccccCCCccccccchhHHHHHHHHHhcC--CCcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 398 MIKFIKKEYPDMQVIGRNGTAVYRVAEYASRR--GVPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 398 v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~--~v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
+....... ....+.++.+.+++. +.+++. ++.+..++.++..+|||+++++...
T Consensus 94 l~~~~~~~---------p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 94 LDATLQQR---------PKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAARLGFDYIGTTLHG 149 (223)
T ss_dssp EECSCSCC---------SSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred EeeecccC---------cccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHHHcCCCEEEeCCCc
Confidence 42211110 001122332222222 577777 6789999999999999999887543
No 320
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=95.46 E-value=0.23 Score=47.37 Aligned_cols=121 Identities=11% Similarity=0.109 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
...+.++.+.+.+-+ +.|-.+-- .+| +..++.+.++ ++++-+=-+.|..+|..+.++|+++| |+..+| .
T Consensus 68 ~mi~eA~~L~~~~~n-v~IKIP~T-~eG-l~A~~~L~~~--GI~vn~TlifS~~QA~~Aa~AGa~yI--SPfvgR----i 136 (223)
T 3s1x_A 68 GMVEEARKIHGLGDN-AVVKIPMT-EDG-LRAIKTLSSE--HINTNCTLVFNPIQALLAAKAGVTYV--SPFVGR----L 136 (223)
T ss_dssp HHHHHHHHHHHTCTT-EEEEEESS-HHH-HHHHHHHHHT--TCCEEEEEECSHHHHHHHHHTTCSEE--EEBSHH----H
T ss_pred HHHHHHHHHHHhCCC-EEEEeCCC-HHH-HHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHcCCeEE--Eeecch----H
Confidence 344566777776533 34433211 122 5677777776 67776666779999999999999988 444444 3
Q ss_pred ccccc-chhHHHHHHHHHhcCC--CcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 410 QVIGR-NGTAVYRVAEYASRRG--VPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 410 ~~~g~-~~~~l~~~~~~~~~~~--v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
.+||. ....+.++.+..+.++ ..|++ ..+|++.++..|..+|||.+-+...+
T Consensus 137 ~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-AS~Rn~~~v~~aa~~G~d~~Tip~~v 191 (223)
T 3s1x_A 137 DDIGEDGMQIIDMIRTIFNNYIIKTQILV-ASIRNPIHVLRSAVIGADVVTVPFNV 191 (223)
T ss_dssp HHTTSCTHHHHHHHHHHHHHTTCCSEEEE-BSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred hhcCCCHHHHHHHHHHHHHHcCCCCEEEE-EeCCCHHHHHHHHHcCCCEEEeCHHH
Confidence 56777 6777778877776654 33444 57999999999999999999888654
No 321
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.29 E-value=0.019 Score=56.22 Aligned_cols=109 Identities=15% Similarity=0.205 Sum_probs=74.9
Q ss_pred HHHHHHHHHcCCcEEEEec-------CCC-c-hhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEEccc
Q psy1056 332 KNRLKLLSQAGVDVVILDS-------SQG-N-SIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEMIKF 401 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~-------~~G-~-~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v~~~ 401 (590)
.+.++..-++|+..+.+.. ..| . +-.-.+.|+.+++.. ++|||.+ -++...+|+.|.++|||+||-+-.
T Consensus 21 ~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aV-sIPVm~k~righ~~EAqilea~GaD~IDesev 99 (291)
T 3o07_A 21 PEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSV-SIPVMAKVRIGHFVEAQIIEALEVDYIDESEV 99 (291)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhC-CCCeEEEEecCcHHHHHHHHHcCCCEEecccC
Confidence 3556666678998887652 122 1 111278899999988 8999965 456789999999999999965411
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEE
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTA 456 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v 456 (590)
.+.. +. ...+.+ ...++|+++ |++|-+++.+++..||+.+
T Consensus 100 ltpa-----d~------~~~I~k--~~f~vpfv~--~~~~l~EAlrri~eGA~mI 139 (291)
T 3o07_A 100 LTPA-----DW------THHIEK--DKFKVPFVC--GAKDLGEALRRINEGAAMI 139 (291)
T ss_dssp SCCS-----CS------SCCCCG--GGCSSCEEE--EESSHHHHHHHHHHTCSEE
T ss_pred CCHH-----HH------HHHhhh--hcCCCcEEe--eCCCHHHHHHHHHCCCCEE
Confidence 1111 00 001111 134689999 9999999999999999988
No 322
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.09 E-value=0.19 Score=47.91 Aligned_cols=128 Identities=9% Similarity=0.011 Sum_probs=76.9
Q ss_pred CceEEeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--ccccCc-HHHHHHHHCCC
Q psy1056 317 NQLIVGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GNVLFG-YQPRATLLNFI 393 (590)
Q Consensus 317 ~~l~v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~v~s~-~~a~~l~~~Gv 393 (590)
+++.+.......+...+.++.+ +.+++++.+...-- ...-.+.++.+++.+++.|++. +-...+ ..++.+.++|+
T Consensus 7 ~~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~-~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 7 PMIQIALDQTNLTDAVAVASNV-ASYVDVIEVGTILA-FAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGA 84 (218)
T ss_dssp CEEEEEECCSSHHHHHHHHHHH-GGGCSEEEECHHHH-HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTC
T ss_pred CCeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCcHHH-HhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCC
Confidence 4455555554444555666664 66899988753210 0111568899999877666652 211122 25688999999
Q ss_pred CEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEe-cCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 394 YQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIA-DGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 394 d~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia-~GGi~~~~di~kalalGA~~v~~ 458 (590)
|++.+-.+... ..+.++.+.+++.+++.++ -=|..|+.++..+..+|+|.+.+
T Consensus 85 d~i~vh~~~~~------------~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 85 DWITVSAAAHI------------ATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp SEEEEETTSCH------------HHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEecCCCH------------HHHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceee
Confidence 99944222111 1233444444445666553 33678999999898899998754
No 323
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.00 E-value=0.24 Score=46.64 Aligned_cols=126 Identities=15% Similarity=0.095 Sum_probs=75.9
Q ss_pred EeEeeccchhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecccc--CcHH-HHHHHHCCCCEEE
Q psy1056 321 VGAAIGTREADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVL--FGYQ-PRATLLNFIYQIE 397 (590)
Q Consensus 321 v~a~i~~~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~--s~~~-a~~l~~~Gvd~i~ 397 (590)
+.......+...+.++.+. .++|++.+-.+.- ..+-.+.++.+++.+++.|+.+.-.. ..+. ++.+.++|+|++.
T Consensus 5 ~a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~-~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~ 82 (211)
T 3f4w_A 5 LALDELTLPEAMVFMDKVV-DDVDIIEVGTPFL-IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVT 82 (211)
T ss_dssp EEECSCCHHHHHHHHHHHG-GGCSEEEECHHHH-HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred EEeCCCCHHHHHHHHHHhh-cCccEEEeCcHHH-HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEE
Confidence 3333333344555666663 5889887643110 11225788999988778888653322 2344 8899999999994
Q ss_pred EcccccccCCCccccccchhHHHHHHHHHhcCCCcEEec-CCCCCHHH-HHHHHHcCCCEEEECc
Q psy1056 398 MIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIAD-GGVQSVGH-VMKALALGASTAMMGS 460 (590)
Q Consensus 398 v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~-GGi~~~~d-i~kalalGA~~v~~g~ 460 (590)
+.... ....+.++.+.+++.+++++.+ -+..++.+ +.+++.+|+|.+.+.+
T Consensus 83 v~~~~------------~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 83 VLGVT------------DVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp EETTS------------CHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEEC
T ss_pred EeCCC------------ChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 42111 1122344555555557777764 35567644 6778889999986643
No 324
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.86 E-value=0.19 Score=47.16 Aligned_cols=116 Identities=17% Similarity=0.133 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe--ccccC-cHH-HHHHHHCCCCEEEEcccccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG--GNVLF-GYQ-PRATLLNFIYQIEMIKFIKK 404 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~--g~v~s-~~~-a~~l~~~Gvd~i~v~~~~~~ 404 (590)
+...+.++.+.+ +++.+.+....- ...-.+.++.+++.+|+.|+++ + +.+ +++ ++.+.++|+|++-|.....
T Consensus 13 ~~~~~~~~~~~~-~v~~iev~~~~~-~~~g~~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~~~~- 88 (207)
T 3ajx_A 13 EAALELAGKVAE-YVDIIELGTPLI-KAEGLSVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAGADLVTVLGSAD- 88 (207)
T ss_dssp HHHHHHHHHHGG-GCSEEEECHHHH-HHHCTHHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEETTSC-
T ss_pred HHHHHHHHHhhc-cCCEEEECcHHH-HhhCHHHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEeccCC-
Confidence 344556666656 889988844220 1111467888898887778774 4 345 556 8889999999994422211
Q ss_pred cCCCccccccchhHHHHHHHHHhcCCCcEEe-cCCCCCHHHHHH-HHHcCCCEEEEC
Q psy1056 405 EYPDMQVIGRNGTAVYRVAEYASRRGVPVIA-DGGVQSVGHVMK-ALALGASTAMMG 459 (590)
Q Consensus 405 ~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia-~GGi~~~~di~k-alalGA~~v~~g 459 (590)
...+.++.+.+++.+.++-. --...|+.+.++ +..+|+|.|.+.
T Consensus 89 -----------~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 89 -----------DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp -----------HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEE
T ss_pred -----------hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEE
Confidence 12233455555444666522 113337777444 446799998443
No 325
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=94.86 E-value=0.075 Score=50.31 Aligned_cols=122 Identities=13% Similarity=0.081 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
...+.++.+.+.+-+ +.|-.+-- .+| +..++.+.+. ++++-+=-+.|..+|..+.++|+++| |+..+| .
T Consensus 66 ~mi~ea~~l~~~~~n-v~IKIP~T-~eG-l~A~~~L~~~--GI~vn~TlifS~~Qa~~Aa~AGa~yI--SPfvgR----i 134 (212)
T 3r8r_A 66 EMIEEGKELAKIAPN-ITVKIPMT-SDG-LKAVRALTDL--GIKTNVTLIFNANQALLAARAGATYV--SPFLGR----L 134 (212)
T ss_dssp HHHHHHHHHHTTCTT-EEEEEESS-HHH-HHHHHHHHHT--TCCEEEEEECSHHHHHHHHHHTCSEE--EEBHHH----H
T ss_pred HHHHHHHHHHHhCCC-EEEEeCCC-HHH-HHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHcCCeEE--Eeccch----h
Confidence 334556666666433 33433211 122 5677777776 67776666779999999999999988 444444 3
Q ss_pred ccccc-chhHHHHHHHHHhcCC-CcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 410 QVIGR-NGTAVYRVAEYASRRG-VPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 410 ~~~g~-~~~~l~~~~~~~~~~~-v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
.+||. ....+.++.+..+.++ -.-|..-.+|++.++..|..+|||.+-+...+
T Consensus 135 ~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~Tip~~v 189 (212)
T 3r8r_A 135 DDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKV 189 (212)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred hhcCCChHHHHHHHHHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEEEcCHHH
Confidence 56777 6666777777766544 23333458999999999999999999887654
No 326
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=94.75 E-value=0.12 Score=53.98 Aligned_cols=63 Identities=17% Similarity=0.285 Sum_probs=51.1
Q ss_pred EeccccccccCCCCCCC-CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCC
Q psy1056 69 VTSRDVDFLENSANMDL-KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGT 134 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~ 134 (590)
.+++ |+.+.|++... ++++++++.+. ...++.|++.++|+.++...++.+++..|+.++++.+
T Consensus 36 ~~fd--~v~l~p~~~~~~~~~vdlst~l~-g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~ 99 (393)
T 2qr6_A 36 YSLD--DISVVSSRRTRSSKDVDTTWHID-AYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAE 99 (393)
T ss_dssp CCGG--GEEECCCSCCCCGGGCBCCEEET-TEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETT
T ss_pred CChh--hEEEccCCCCCChhHCCceeEEc-ccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEec
Confidence 5677 67777875555 67888888884 6778999999999999888888889999999988754
No 327
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.72 E-value=0.28 Score=50.58 Aligned_cols=113 Identities=13% Similarity=0.077 Sum_probs=69.6
Q ss_pred HHHHHHHHHc-CCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccc-cCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 332 KNRLKLLSQA-GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNV-LFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 332 ~e~~~~li~~-gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v-~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
.+.+.++..+ |+.+++ .+-..+...+.++.+++.. ..|+.+.-. .+.+.++.++++|+|+|.+... .
T Consensus 59 ~~lA~avA~~GGlgii~---~~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a--~----- 127 (361)
T 3khj_A 59 HLMAVGMARLGGIGIIH---KNMDMESQVNEVLKVKNSG-GLRVGAAIGVNEIERAKLLVEAGVDVIVLDSA--H----- 127 (361)
T ss_dssp HHHHHHHHHTTCEEEEC---SSSCHHHHHHHHHHHHHTT-CCCCEEEECTTCHHHHHHHHHTTCSEEEECCS--C-----
T ss_pred HHHHHHHHHcCCCeEEe---cCCCHHHHHHHHHHHHhcc-CceEEEEeCCCHHHHHHHHHHcCcCeEEEeCC--C-----
Confidence 3555555555 444543 2223455667778777653 566554322 2378899999999999844211 1
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEEC
Q psy1056 410 QVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMG 459 (590)
Q Consensus 410 ~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g 459 (590)
|.....+..+....+..++|+|+ |.+.++.++.++..+|||+|.+|
T Consensus 128 ---G~~~~~~~~i~~i~~~~~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 128 ---GHSLNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp ---CSBHHHHHHHHHHHHHCCCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred ---CCcHHHHHHHHHHHHhcCCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 11111112233333334789998 67899999999999999999886
No 328
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=94.67 E-value=0.076 Score=51.65 Aligned_cols=73 Identities=16% Similarity=0.129 Sum_probs=51.1
Q ss_pred HHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 383 YQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 383 ~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
+.|+...+.|+|.+-+ .+..... +.......+ .+.++...+|+-..||||+-.++.+.|.+||+-|.+|+.
T Consensus 35 ~~a~~~~~~gad~lhvvDld~a~~-----~~~~~~~~i---~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 35 KKFKEYEKAGAKELHLVDLTGAKD-----PSKRQFALI---EKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHHHC-----GGGCCHHHH---HHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred HHHHHHHHCCCCEEEEEecCcccc-----cchhHHHHH---HHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 5677888899998865 2221111 001122233 334445679999999999999999999999999999976
Q ss_pred cc
Q psy1056 462 LA 463 (590)
Q Consensus 462 l~ 463 (590)
..
T Consensus 107 a~ 108 (243)
T 4gj1_A 107 AI 108 (243)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 329
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=94.66 E-value=0.29 Score=50.33 Aligned_cols=118 Identities=15% Similarity=0.072 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEeccc--cCcHHH----HHHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGNV--LFGYQP----RATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~~~a----~~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-++...++....++.++.+++.+ +++++.+.-- -+.+++ +.|.+.|+++| +-
T Consensus 147 ~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----E~ 222 (359)
T 1mdl_A 147 LATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI----EE 222 (359)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE----EC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE----EC
Confidence 3446677788899999999876655566788999999887 5788886422 255555 45666899988 21
Q ss_pred cccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 403 KKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 403 ~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
. + .. ... ..++..+..++||++++.+.++.++.+++..| +|+|++....
T Consensus 223 --P---~---~~~~~~---~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~ 273 (359)
T 1mdl_A 223 --P---T---LQHDYE---GHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMK 273 (359)
T ss_dssp --C---S---CTTCHH---HHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTT
T ss_pred --C---C---ChhhHH---HHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchh
Confidence 1 1 11 222 23333334579999999999999999999987 7888776544
No 330
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=94.56 E-value=0.43 Score=49.29 Aligned_cols=118 Identities=8% Similarity=-0.006 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEeccc--cCcHHH----HHHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGNV--LFGYQP----RATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~~~a----~~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+....++....++.++.+++.+ |++++.+.-- -+.+++ +.|.+.|+++| +-
T Consensus 149 ~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----Eq 224 (371)
T 2ovl_A 149 DLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWI----EE 224 (371)
T ss_dssp HHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEE----EC
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE----EC
Confidence 3456677788899999998877666666688899999877 5788876422 255555 44556899988 21
Q ss_pred cccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 403 KKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 403 ~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
. + .. ....+.++++. .++||++++.+.+..++.+++..| +|.|++....
T Consensus 225 --P---~---~~~d~~~~~~l~~~---~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 275 (371)
T 2ovl_A 225 --P---T---IPDDLVGNARIVRE---SGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSN 275 (371)
T ss_dssp --C---S---CTTCHHHHHHHHHH---HCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTT
T ss_pred --C---C---CcccHHHHHHHHhh---CCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccc
Confidence 1 1 11 23333444433 369999999999999999999987 7888776544
No 331
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=94.45 E-value=0.063 Score=56.30 Aligned_cols=132 Identities=14% Similarity=0.083 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc-----------------------h-hhHHHHHHHHHHhCCCceEEecc-------
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN-----------------------S-IYQIEMIKFIKKEYPDMQVIGGN------- 378 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~-----------------------~-~~~l~~i~~i~~~~~~vpvi~g~------- 378 (590)
...+.+....++|.|.|.|+.+||+ + ++.++.++.+|+.+++-||.+.=
T Consensus 173 ~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~ 252 (400)
T 4gbu_A 173 EYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFN 252 (400)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 4456788888999999999976531 1 44578999999988655776431
Q ss_pred -ccC----------cHHHHHHHH---CC--CCEEEEcc-cccccCCCccccc-cchhHHHHHHHHHhcCCCcEEecCCCC
Q psy1056 379 -VLF----------GYQPRATLL---NF--IYQIEMIK-FIKKEYPDMQVIG-RNGTAVYRVAEYASRRGVPVIADGGVQ 440 (590)
Q Consensus 379 -v~s----------~~~a~~l~~---~G--vd~i~v~~-~~~~~~~~~~~~g-~~~~~l~~~~~~~~~~~v~iia~GGi~ 440 (590)
..+ .+.+..|.. +| .+++.+.. ...... ...+.+ +.......+++. .++|+|+.||+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ir~~---~~~pvi~~G~~~ 328 (400)
T 4gbu_A 253 SMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPF-LTEGEGEYEGGSNDFVYSI---WKGPVIRAGNFA 328 (400)
T ss_dssp TCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTT-SCTTTTCCCSCCSTHHHHH---CCSCEEEESSCT
T ss_pred CCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcc-cccccchhhhHHHHHHHHH---hCCCEEEeCCCC
Confidence 000 112223322 22 23443311 000000 000111 111111113322 368999999999
Q ss_pred CHHHHHHHHHc-CCCEEEECccccCC
Q psy1056 441 SVGHVMKALAL-GASTAMMGSLLAGT 465 (590)
Q Consensus 441 ~~~di~kalal-GA~~v~~g~~l~~~ 465 (590)
+..+++.++.. |||+|.+|++|..-
T Consensus 329 ~~~~~~~~~~~~~aDlV~~gR~~iad 354 (400)
T 4gbu_A 329 LHPEVVREEVKDKRTLIGYGRFFISN 354 (400)
T ss_dssp TCHHHHHHHTTSTTEEEECCHHHHHC
T ss_pred ChHHHHHHHHcCCCeEhHHHHHHHHC
Confidence 98888877654 69999999988643
No 332
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=94.32 E-value=0.19 Score=47.94 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=69.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCchhhH---HHHH---HHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccc
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNSIYQ---IEMI---KFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKK 404 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~~~~---l~~i---~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~ 404 (590)
..+.++.+.+.|++.+++....+....+ .+.+ ..+...+ ++++++. +.++.+.++|+|++-+ ..
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~-~v~v~v~-----~~~~~a~~~gad~v~l----~~ 102 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREA-GVPFIVN-----DDVELALNLKADGIHI----GQ 102 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHH-TCCEEEE-----SCHHHHHHHTCSEEEE----CT
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHc-CCeEEEc-----CHHHHHHHcCCCEEEE----CC
Confidence 5677888999999999988655444333 3333 3333444 6777773 4567788899999932 11
Q ss_pred cCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 405 EYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 405 ~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
. .. .+.++++.. +. ++..-.+.|+.++.++...|||++.+|+.|.
T Consensus 103 ~---------~~-~~~~~~~~~---g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~ 147 (227)
T 2tps_A 103 E---------DA-NAKEVRAAI---GD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYP 147 (227)
T ss_dssp T---------SS-CHHHHHHHH---TT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSC
T ss_pred C---------cc-CHHHHHHhc---CC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcC
Confidence 1 11 123333322 23 3331124799999999999999999988763
No 333
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=94.22 E-value=0.73 Score=47.69 Aligned_cols=119 Identities=12% Similarity=0.056 Sum_probs=81.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCC------chhhHHHHHHHHHHhC-CCceEEeccc--cCcHHH----HHHHHCCCCE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQG------NSIYQIEMIKFIKKEY-PDMQVIGGNV--LFGYQP----RATLLNFIYQ 395 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G------~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~~~a----~~l~~~Gvd~ 395 (590)
+...+.+..+.+.|.+.+-++..++ +....++.++.+++.+ |++++.+.-- -+.++| +.|.+.|+++
T Consensus 151 e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 230 (382)
T 1rvk_A 151 EDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDW 230 (382)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCE
Confidence 3445677778888999999887664 4456678899999876 5788886422 255555 4455689998
Q ss_pred EEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCC-HHHHHHHHHcC-CCEEEECcc
Q psy1056 396 IEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQS-VGHVMKALALG-ASTAMMGSL 461 (590)
Q Consensus 396 i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~-~~di~kalalG-A~~v~~g~~ 461 (590)
| +-- +... ....+..++ +..++||++++.+.+ ..++.+++..| +|.|++-..
T Consensus 231 i----E~P-----~~~~--~~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 231 I----EEP-----MDEQ--SLSSYKWLS---DNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp E----ECC-----SCTT--CHHHHHHHH---HHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred E----eCC-----CChh--hHHHHHHHH---hhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 8 211 1000 222333333 345799999999999 99999999987 688877543
No 334
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.22 E-value=0.3 Score=46.83 Aligned_cols=109 Identities=17% Similarity=0.054 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEe---cc-----c---cCcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIG---GN-----V---LFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~---g~-----v---~s~~~a~~l~~~Gvd~i~v 398 (590)
...+.++.+.++|++.++++. .+.++.+++.. ++|++. ++ + .+.+.++.+.++|+|+|.+
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~--------~~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l 107 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS--------VRDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAM 107 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES--------HHHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEeecCC--------HHHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEE
Confidence 456788899999999998852 34577777776 688751 11 1 1457899999999999955
Q ss_pred cccccccCCCcccccc-chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEE
Q psy1056 399 IKFIKKEYPDMQVIGR-NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTA 456 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v 456 (590)
....... ..|. ....+..+++... +.+++. ++.+..++.+++.+|||++
T Consensus 108 ~~~~~~~-----~~~~~~~~~i~~i~~~~~--~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 108 DCTKRDR-----HDGLDIASFIRQVKEKYP--NQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp ECCSSCC-----TTCCCHHHHHHHHHHHCT--TCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred cccccCC-----CCCccHHHHHHHHHHhCC--CCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 3222111 0011 1223333443321 577777 7889999999999999999
No 335
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.20 E-value=0.03 Score=51.85 Aligned_cols=31 Identities=26% Similarity=0.219 Sum_probs=28.9
Q ss_pred CCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 429 RGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 429 ~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
.++|+||.|+|++.+|+.. +..||++|.-|.
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 4689999999999999999 999999998885
No 336
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=94.19 E-value=0.73 Score=47.75 Aligned_cols=118 Identities=15% Similarity=0.072 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEecc--ccCcHHH----HHHHHCCCCEEEEccccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGN--VLFGYQP----RATLLNFIYQIEMIKFIK 403 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~--v~s~~~a----~~l~~~Gvd~i~v~~~~~ 403 (590)
...+.+..+.+.|.+.+-+.... ......+.++.+++.+++.++.+.- .-+.+++ +.|.+.|+++| +
T Consensus 150 ~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~i----E-- 222 (384)
T 2pgw_A 150 ELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFI----E-- 222 (384)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEE----E--
T ss_pred HHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEE----e--
Confidence 44567778889999999887643 4455678899999888767777631 1255555 44556899988 2
Q ss_pred ccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 404 KEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 404 ~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
.. +..+ ....+.+++ +..++||++++.+.++.++.+++..| +|.|++....
T Consensus 223 qP---~~~~--~~~~~~~l~---~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 223 QP---TVSW--SIPAMAHVR---EKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp CC---SCTT--CHHHHHHHH---HHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CC---CChh--hHHHHHHHH---hhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 11 1100 223333343 34579999999999999999999987 7999886443
No 337
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=94.17 E-value=0.4 Score=49.98 Aligned_cols=116 Identities=10% Similarity=-0.001 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+....++....++.++.+++.+ +++++.+.- .-+.+++. .|.+.|+++| +-
T Consensus 165 ~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----E~ 240 (393)
T 2og9_A 165 QLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWI----EE 240 (393)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE----EC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE----EC
Confidence 3456777788999999998877655666788899999886 578887642 22666654 4455788887 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
. +..+ .... .++..+..++||++++.+.++.++.+++..| +|+|++-
T Consensus 241 --P---~~~~--~~~~---~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 241 --P---LDAY--DHEG---HAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp --C---SCTT--CHHH---HHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred --C---CCcc--cHHH---HHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 1 1100 2222 3333334579999999999999999999998 7888764
No 338
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=94.15 E-value=0.47 Score=45.83 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=43.7
Q ss_pred HHHHHHHcC----CcEEEEecCCCchhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEE
Q psy1056 334 RLKLLSQAG----VDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 334 ~~~~li~~g----ad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v 398 (590)
++....+.+ ..++-++. .|. ....+.++.+++..++.|+++| ++.++++++++.+ |||.+.|
T Consensus 143 ~~~~~a~~g~~~~~~~VYl~s-~G~-~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIV 209 (240)
T 1viz_A 143 DIVAYARVSELLQLPIFYLEY-SGV-LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVV 209 (240)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC-TTS-CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHhCcccCCCEEEEeC-CCc-cChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEE
Confidence 444444443 36676666 453 3346788888887656898875 5559999999988 9999955
No 339
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=94.13 E-value=0.085 Score=52.86 Aligned_cols=111 Identities=14% Similarity=0.189 Sum_probs=72.9
Q ss_pred HHHHHHHHHcCCcEEEEecC--------CCc-hhhHHHHHHHHHHhCCCceEEec-cccCcHHHHHHHHCCCCEEEEccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSS--------QGN-SIYQIEMIKFIKKEYPDMQVIGG-NVLFGYQPRATLLNFIYQIEMIKF 401 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~--------~G~-~~~~l~~i~~i~~~~~~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v~~~ 401 (590)
.+.+..+.++|++.+++... .|. .....+.++.+++.+ ++|++++ ...+.+.++.+.++|+|+|+....
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad~v~~~~~ 109 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVDFIDESEV 109 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCCEEeeeCC
Confidence 57888889999999987311 110 111256778888777 7898764 455789999999999999943211
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
.+.. . .. ..+.+. ..++++++ ++.++.++.++..+|||.+.+
T Consensus 110 ~~~~-------~-~~---~~~~~~--~~~i~l~~--~v~~~~~~~~a~~~Gad~I~v 151 (297)
T 2zbt_A 110 LTPA-------D-EE---HHIDKW--KFKVPFVC--GARNLGEALRRIAEGAAMIRT 151 (297)
T ss_dssp SCCS-------C-SS---CCCCGG--GCSSCEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred CChH-------H-HH---HHHHHh--CCCceEEe--ecCCHHHHHHHHHcCCCEEEE
Confidence 1100 0 00 001110 12578887 588999999999999999844
No 340
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=94.02 E-value=0.43 Score=45.93 Aligned_cols=124 Identities=11% Similarity=0.063 Sum_probs=74.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE--ecc----cc---CcHHHHHHHHCCCCEEEEcc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI--GGN----VL---FGYQPRATLLNFIYQIEMIK 400 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi--~g~----v~---s~~~a~~l~~~Gvd~i~v~~ 400 (590)
+..+..+...+.++..++|+.. ++...-+.++.. ++.+. ++. .. -..+++++++.|||.||+-+
T Consensus 44 ~i~~lc~eA~~~~~~aVcV~p~-----~v~~a~~~L~~s--~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVi 116 (239)
T 3ngj_A 44 QIRKLCSEAAEYKFASVCVNPT-----WVPLCAELLKGT--GVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVI 116 (239)
T ss_dssp HHHHHHHHHHHHTCSEEEECGG-----GHHHHHHHHTTS--SCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCcEEEECHH-----HHHHHHHHhCCC--CCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEe
Confidence 4445667777889999998442 222222223221 34332 221 11 24577889999999999843
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHH----HHcCCCEEEECccc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKA----LALGASTAMMGSLL 462 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~ka----lalGA~~v~~g~~l 462 (590)
..+.-++ .+|.....-+..+.+.|...-+++|..-|..+..++.+| ..+|||+|=-.+-|
T Consensus 117 Nig~lk~--g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf 180 (239)
T 3ngj_A 117 NIGMVKA--KKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGF 180 (239)
T ss_dssp CHHHHHT--TCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS
T ss_pred ehHHhcc--ccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCC
Confidence 3322100 112223334555666665434788998889999999998 88999999554433
No 341
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=93.66 E-value=0.16 Score=49.20 Aligned_cols=90 Identities=14% Similarity=0.042 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCCCCcccCCceEEeEeeccchhHHHHHHHHHHcCCcEE
Q psy1056 267 ISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPDSSKDENNQLIVGAAIGTREADKNRLKLLSQAGVDVV 346 (590)
Q Consensus 267 ~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~~~~d~~~~l~v~a~i~~~~~~~e~~~~li~~gad~i 346 (590)
....++.+.+.+.++..+|++.++ ...++.+.+.|++++
T Consensus 122 ~~tv~aa~~L~~~Gf~Vlpy~~dd-----------------------------------------~~~akrl~~~G~~aV 160 (265)
T 1wv2_A 122 VETLKAAEQLVKDGFDVMVYTSDD-----------------------------------------PIIARQLAEIGCIAV 160 (265)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECSC-----------------------------------------HHHHHHHHHSCCSEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC-----------------------------------------HHHHHHHHHhCCCEE
Confidence 334567788888888888866421 355677888999988
Q ss_pred EEecC-CCchhh--HHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE
Q psy1056 347 ILDSS-QGNSIY--QIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 347 ~V~~~-~G~~~~--~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
.-... -|...+ -.+.++.+++.. ++|||+ |+|.++++|.++.++|+|++-|
T Consensus 161 mPlg~pIGsG~Gi~~~~lI~~I~e~~-~vPVI~eGGI~TPsDAa~AmeLGAdgVlV 215 (265)
T 1wv2_A 161 MPLAGLIGSGLGICNPYNLRIILEEA-KVPVLVDAGVGTASDAAIAMELGCEAVLM 215 (265)
T ss_dssp EECSSSTTCCCCCSCHHHHHHHHHHC-SSCBEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred EeCCccCCCCCCcCCHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 55332 122211 156778888864 799885 5888999999999999999955
No 342
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.61 E-value=0.9 Score=44.62 Aligned_cols=65 Identities=17% Similarity=0.027 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCcEEEEecC---CCch----hhHHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS---QGNS----IYQIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~---~G~~----~~~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v 398 (590)
++++.+.+..-.++.+-+. .|.+ ..+.+.++.+++.. +.|+++|... ++++++++..+|+|++.|
T Consensus 162 eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~-~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 162 DTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN-APPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp HHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT-CCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 5666666665555544222 2222 23567888888876 7899987666 799999899999999966
No 343
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=93.39 E-value=0.86 Score=44.96 Aligned_cols=114 Identities=11% Similarity=-0.062 Sum_probs=70.6
Q ss_pred HHHHHHHcCCcEEEEecCC--------CchhhHHHHHHHHHHhCCC--ceEEecccc--CcH----HHHHHHHCCCCEEE
Q psy1056 334 RLKLLSQAGVDVVILDSSQ--------GNSIYQIEMIKFIKKEYPD--MQVIGGNVL--FGY----QPRATLLNFIYQIE 397 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~--------G~~~~~l~~i~~i~~~~~~--vpvi~g~v~--s~~----~a~~l~~~Gvd~i~ 397 (590)
.++..++.|++-|-+...- |+...+.+.|+.+++...+ +.||+-... +.+ ..+.++++|+|+|+
T Consensus 105 Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVK 184 (297)
T 4eiv_A 105 EAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQ 184 (297)
T ss_dssp HHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEE
Confidence 5667788899977554432 4445566777777766432 455542222 333 23456679999993
Q ss_pred EcccccccCCCccccccchhHHHHHHHHHh---------------------cCCCcEEec-CCCCCHHHHHHHHHcCCC
Q psy1056 398 MIKFIKKEYPDMQVIGRNGTAVYRVAEYAS---------------------RRGVPVIAD-GGVQSVGHVMKALALGAS 454 (590)
Q Consensus 398 v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~---------------------~~~v~iia~-GGi~~~~di~kalalGA~ 454 (590)
-| - ||...|.|+..+...++..+ ..++.|=|+ |||||..|+.+-+.+...
T Consensus 185 TS----T---Gf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e 256 (297)
T 4eiv_A 185 TS----S---GLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE 256 (297)
T ss_dssp CC----C---SSSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cC----C---CCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH
Confidence 21 1 13333446666665555542 235889999 999999999999986544
No 344
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=93.38 E-value=0.79 Score=42.96 Aligned_cols=109 Identities=16% Similarity=0.130 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHH---HhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIK---KEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEY 406 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~---~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~ 406 (590)
+..+.++.+.+.|++.+++...........+.++.++ ..+ ++++++. +.++.+.++|+|+|-+. ....
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~-~v~v~v~-----~~~~~a~~~gad~v~l~--~~~~- 97 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY-DALFFVD-----DRVDVALAVDADGVQLG--PEDM- 97 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT-TCEEEEE-----SCHHHHHHHTCSEEEEC--TTSC-
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc-CCeEEEc-----ChHHHHHHcCCCEEEEC--CccC-
Confidence 4567788899999999998765544444444444444 344 6777773 56678889999999221 0000
Q ss_pred CCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 407 PDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 407 ~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
. ...+++.. .++.+.. .+.|+.++.++...|||++.+++.+
T Consensus 98 --------~---~~~~~~~~--~~~~~~v--~~~t~~e~~~~~~~g~d~i~~~~~~ 138 (215)
T 1xi3_A 98 --------P---IEVAKEIA--PNLIIGA--SVYSLEEALEAEKKGADYLGAGSVF 138 (215)
T ss_dssp --------C---HHHHHHHC--TTSEEEE--EESSHHHHHHHHHHTCSEEEEECSS
T ss_pred --------C---HHHHHHhC--CCCEEEE--ecCCHHHHHHHHhcCCCEEEEcCCc
Confidence 1 12333332 2332222 3679999999999999999887655
No 345
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=93.29 E-value=0.42 Score=46.33 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCc---------hhhH---HHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGN---------SIYQ---IEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIE 397 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~---------~~~~---l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~ 397 (590)
+..+.++.+++.|++.+.+-..+.. .... ...+..+.+.+ ++++++-+ ..+.+.++|+|+|
T Consensus 44 ~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~-~~~liInd-----~~~lA~~~gAdGV- 116 (243)
T 3o63_A 44 DLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRY-GALFAVND-----RADIARAAGADVL- 116 (243)
T ss_dssp CHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHT-TCEEEEES-----CHHHHHHHTCSEE-
T ss_pred hHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhh-CCEEEEeC-----HHHHHHHhCCCEE-
Confidence 4678888899999999998655421 2223 34455566666 78888742 3344667899998
Q ss_pred EcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcccc
Q psy1056 398 MIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 398 v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~ 463 (590)
+.+.. .. ...++++... .+..+-+ -+.|..++.+|...|||++.+|+.|.
T Consensus 117 ---HLg~~---------dl-~~~~~r~~~~-~~~~iG~--S~ht~~Ea~~A~~~GaDyI~vgpvf~ 166 (243)
T 3o63_A 117 ---HLGQR---------DL-PVNVARQILA-PDTLIGR--STHDPDQVAAAAAGDADYFCVGPCWP 166 (243)
T ss_dssp ---EECTT---------SS-CHHHHHHHSC-TTCEEEE--EECSHHHHHHHHHSSCSEEEECCSSC
T ss_pred ---EecCC---------cC-CHHHHHHhhC-CCCEEEE--eCCCHHHHHHHhhCCCCEEEEcCccC
Confidence 33322 00 1223444322 1232333 47899999999999999999999874
No 346
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=93.26 E-value=0.16 Score=48.81 Aligned_cols=123 Identities=11% Similarity=-0.063 Sum_probs=79.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCch----hhHHHHHHHHHHhCCCceEEecccc-C-cHHHHHHHHCCCCEEEEccc-
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNS----IYQIEMIKFIKKEYPDMQVIGGNVL-F-GYQPRATLLNFIYQIEMIKF- 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~----~~~l~~i~~i~~~~~~vpvi~g~v~-s-~~~a~~l~~~Gvd~i~v~~~- 401 (590)
....+.++.+.+.|++.++++...|+. ..-.+.++.+++.. +.|+.+.=.. + ..-.+.+.++|+|++.+-.+
T Consensus 17 ~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 17 SRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSSGGGTHHHHHHHTCSEEEEECST
T ss_pred hHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccCHHHHHHHHHHcCCCEEEECccc
Confidence 456678888899999999998765542 12247788888765 3444321111 2 23468888999999955333
Q ss_pred -ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccccCC
Q psy1056 402 -IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 402 -~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l~~~ 465 (590)
.+.. ..++.+.+.+.++.+..+=.-.|+.+..+++.-|+|.|.+++.+.++
T Consensus 96 ~~~~~-------------~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ 147 (230)
T 1tqj_A 96 NASPH-------------LHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGF 147 (230)
T ss_dssp TTCTT-------------HHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC--
T ss_pred ccchh-------------HHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEecccc
Confidence 2211 22334444455665555445578888899999999999998887543
No 347
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=93.19 E-value=0.46 Score=49.41 Aligned_cols=116 Identities=6% Similarity=-0.023 Sum_probs=79.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHH----HHHHHCCCCEEEEccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQP----RATLLNFIYQIEMIKF 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a----~~l~~~Gvd~i~v~~~ 401 (590)
+...+.+..+.+.|.+.+-++....+... ++.++.+++.+ +++++.+.- .-+.+++ +.|.+.|+++| +
T Consensus 166 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----E 240 (388)
T 2nql_A 166 KARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFA----E 240 (388)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCE----E
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEE----E
Confidence 34456777788999999998865434566 88999999876 578888642 1255555 44555788887 2
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
- . + . ...+...++..+..++||++++.+.++.++.+++..| +|+|++-
T Consensus 241 q--P---~---~--~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 241 A--P---V---W--TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp C--C---S---C--TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred C--C---C---C--hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 1 1 1 1 1112233444445579999999999999999999887 7888654
No 348
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.15 E-value=0.21 Score=51.60 Aligned_cols=72 Identities=42% Similarity=0.726 Sum_probs=60.5
Q ss_pred cchHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhcccccccc
Q psy1056 136 EADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRVGS 207 (590)
Q Consensus 136 ~d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v~~ 207 (590)
++..+++..++++++|+|.+++++++.....+.++++++.+|...++-.++.+.+..+.+.+..+|+++||+
T Consensus 107 ~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~ 178 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGI 178 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred hhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEec
Confidence 456788999999999999999999998888999999998776665666777777778888899988887763
No 349
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=93.13 E-value=0.12 Score=56.66 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=50.7
Q ss_pred cHHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHH-----------HHHHH
Q psy1056 382 GYQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGH-----------VMKAL 449 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~d-----------i~kal 449 (590)
.+-|+.+.+.|+|.+-+ .+...+. +-......+..+.+.++...+||+..|||++..| +.+.+
T Consensus 283 ~~~A~~~~~~Ga~~l~~~dl~~~~~-----~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 283 VQLAQKYYQQGADEVTFLNITSFRD-----CPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC---C-----CCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCCcccc-----ccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 35678888899999855 2221111 0000112233445555556799999999999844 99999
Q ss_pred HcCCCEEEECccc
Q psy1056 450 ALGASTAMMGSLL 462 (590)
Q Consensus 450 alGA~~v~~g~~l 462 (590)
.+|||.|.+|+..
T Consensus 358 ~aGad~V~igt~~ 370 (555)
T 1jvn_A 358 RSGADKVSIGTDA 370 (555)
T ss_dssp HHTCSEEEECHHH
T ss_pred HcCCCEEEECCHH
Confidence 9999999999765
No 350
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.11 E-value=5.8 Score=40.36 Aligned_cols=171 Identities=16% Similarity=0.110 Sum_probs=104.4
Q ss_pred HHHHHHHHHhcCCCcceEEcCCCceEEEEeeccccc-----cc-----------CCCCCCccc---------------CC
Q psy1056 269 LEEANVILEKSKKGKLPILNDKGELIALIARTDLKK-----SR-----------DYPDSSKDE---------------NN 317 (590)
Q Consensus 269 l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~-----~~-----------~~~~~~~d~---------------~~ 317 (590)
+.++.+.+.+.++..-++...+..++|+|-.+..+. .. .|+...++. .+
T Consensus 26 ~~~~~~~~~~~g~~~~~~~g~~~~~ig~~g~~~~~~~~~~~~~~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~~iG~~ 105 (350)
T 1vr6_A 26 IRKVVKLAESYNLKCHISKGQERTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNG 105 (350)
T ss_dssp HHHHHHHHHHTTEEEEEEECSSCEEEEEEEEESSCCHHHHHTSTTEEEEEECSCSCCTTBTTTCCSCCCEECSSCEESTT
T ss_pred HHHHHHHHHhCCCeEEEEecCceEEEEEECCcCcCCHHHhhCCccceeeccCCCChhhhhhhcCCcCCEEEECCEEECCC
Confidence 445555667777776677777778888876543221 11 122221110 01
Q ss_pred ceEEeEeec---cchhHHHHHHHHHHcCCcEEEEecC---------CCchhhHHHHHHHHHHhCCCceEEeccccCcHHH
Q psy1056 318 QLIVGAAIG---TREADKNRLKLLSQAGVDVVILDSS---------QGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQP 385 (590)
Q Consensus 318 ~l~v~a~i~---~~~~~~e~~~~li~~gad~i~V~~~---------~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a 385 (590)
++++.+... ..+...+.++.+.++|++++-.... +|.....+..+..+++++ ++|++. ++.+.+.+
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~-Gl~~~t-e~~d~~~~ 183 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY-GMYVVT-EALGEDDL 183 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH-TCEEEE-ECSSGGGH
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc-CCcEEE-EeCCHHHH
Confidence 233333222 2234556788889999998765431 222233456666667666 788876 99999999
Q ss_pred HHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCC-CHHHHHHHHH----cCCCEE
Q psy1056 386 RATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQ-SVGHVMKALA----LGASTA 456 (590)
Q Consensus 386 ~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~-~~~di~kala----lGA~~v 456 (590)
..+.+. +|++.+.-.+.+. ...+++.+ +.+.||+.+=|.. |..|+..|.. .|..-+
T Consensus 184 ~~l~~~-vd~lkIgAr~~~n-------------~~LL~~va-~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~v 244 (350)
T 1vr6_A 184 PKVAEY-ADIIQIGARNAQN-------------FRLLSKAG-SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKI 244 (350)
T ss_dssp HHHHHH-CSEEEECGGGTTC-------------HHHHHHHH-TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHh-CCEEEECcccccC-------------HHHHHHHH-ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeE
Confidence 999998 9999773222222 12233333 5689999999997 9999887664 476444
No 351
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.09 E-value=1.5 Score=45.31 Aligned_cols=116 Identities=9% Similarity=-0.038 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHHHH----HHCCCCEEEEccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPRAT----LLNFIYQIEMIKF 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~~l----~~~Gvd~i~v~~~ 401 (590)
+...+.+..+.+.|.+.+-++..+ +....++.++.+++.+ ++.++.+.- .-+.+++.++ .+.|+ +| +
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~i----E 220 (379)
T 2rdx_A 147 AETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-IL----E 220 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EE----E
T ss_pred HHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EE----e
Confidence 345667788889999999987654 3455678899999888 478888642 2266666443 44677 76 2
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
.. +. .+...++..+..++||++++.+.++.++.+++..| +|.|++....
T Consensus 221 --~P---~~-------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~ 270 (379)
T 2rdx_A 221 --QP---CR-------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISN 270 (379)
T ss_dssp --CC---SS-------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTT
T ss_pred --CC---cC-------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccc
Confidence 11 11 12233444445579999999999999999999987 7899886544
No 352
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.01 E-value=1.2 Score=43.77 Aligned_cols=40 Identities=13% Similarity=-0.088 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhCCCceEEecccc-CcHHHHHHHHCCCCEEEE
Q psy1056 358 QIEMIKFIKKEYPDMQVIGGNVL-FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 358 ~l~~i~~i~~~~~~vpvi~g~v~-s~~~a~~l~~~Gvd~i~v 398 (590)
..+.++.+++.. +.|+.++... +++++.+++.+|||++.|
T Consensus 193 ~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 193 LHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp CHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 367888888876 7899887666 599999999999999966
No 353
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=92.98 E-value=1.5 Score=45.55 Aligned_cols=115 Identities=6% Similarity=-0.078 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEeccc--cCcHHH----HHHHH--CCCCEEEEcc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGNV--LFGYQP----RATLL--NFIYQIEMIK 400 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~~~a----~~l~~--~Gvd~i~v~~ 400 (590)
...+.+..+.+.|.+.+-+....++....++.++.+++.+ +++++.+.-- -+.++| +.|.+ .|+++|
T Consensus 148 ~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~i---- 223 (389)
T 2oz8_A 148 AFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWV---- 223 (389)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEE----
T ss_pred HHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEE----
Confidence 3456677788899999998876655566688999999987 5788876321 255555 45666 677766
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcC-CCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRR-GVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~-~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
+-- +... ....+ ++..+.. ++||++++.+ +..++.+++..| +|.|++.
T Consensus 224 EqP-----~~~~--~~~~~---~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 224 EDP-----ILRH--DHDGL---RTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp ESC-----BCTT--CHHHH---HHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred eCC-----CCCc--CHHHH---HHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 211 1000 22223 3333345 6999999999 999999999998 7889885
No 354
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=92.93 E-value=1.3 Score=45.87 Aligned_cols=119 Identities=12% Similarity=-0.062 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+....++....++.++.+++.+ +++++.+.- .-+.++|. .|.+.|+++| +-
T Consensus 168 ~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----Eq 243 (392)
T 1tzz_A 168 MLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWY----EE 243 (392)
T ss_dssp HHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEE----EC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCee----cC
Confidence 3456677788899999998877655566688899999876 578887632 22566654 4445788887 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-----CCEEEECccc
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-----ASTAMMGSLL 462 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-----A~~v~~g~~l 462 (590)
- + ....+...++..+..++||++++.+.+..++.+++..| +|.+++-...
T Consensus 244 P-----~-----~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~ 298 (392)
T 1tzz_A 244 V-----G-----DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCAL 298 (392)
T ss_dssp C-----S-----CTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTT
T ss_pred C-----C-----ChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccc
Confidence 1 1 11112233444444579999999999999999999998 8999775443
No 355
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=92.87 E-value=1 Score=46.26 Aligned_cols=118 Identities=12% Similarity=0.007 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHH-cCCcEEEEecCCCchhhHHHHHHHHHHhCC-CceEEecc-c-cCcHHH----HHHHHCCCCEEEEcc
Q psy1056 329 EADKNRLKLLSQ-AGVDVVILDSSQGNSIYQIEMIKFIKKEYP-DMQVIGGN-V-LFGYQP----RATLLNFIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~-~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~vpvi~g~-v-~s~~~a----~~l~~~Gvd~i~v~~ 400 (590)
+...+.+..+++ .|.+.+-++...++....++.++.+++.++ ++++.+.- . -+.+++ +.|.+.|+++|
T Consensus 144 e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i---- 219 (370)
T 1nu5_A 144 ARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELV---- 219 (370)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEE----
T ss_pred HHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceE----
Confidence 345567777888 999999988776555566788999998764 67777642 1 255555 44666899988
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+-- +... ....+..++ +..++||++++.+.+..++.+++..| +|.|++-.
T Consensus 220 EqP-----~~~~--~~~~~~~l~---~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 220 EQP-----VPRA--NFGALRRLT---EQNGVAILADESLSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp ECC-----SCTT--CHHHHHHHH---HHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred eCC-----CCcc--cHHHHHHHH---HhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEch
Confidence 211 1000 222333333 34579999999999999999999987 78887754
No 356
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.75 E-value=0.58 Score=44.75 Aligned_cols=123 Identities=7% Similarity=-0.034 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCch----hhHHHHHHHHHHhCCCceEEecccc--CcHHHHHHHHCCCCEEEEcccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNS----IYQIEMIKFIKKEYPDMQVIGGNVL--FGYQPRATLLNFIYQIEMIKFI 402 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~----~~~l~~i~~i~~~~~~vpvi~g~v~--s~~~a~~l~~~Gvd~i~v~~~~ 402 (590)
....+.++.+.+.|++.++++...|+. ..-.+.++.+++.. +.|+.++=.. ..+.++.+.++|+|++-+-.+.
T Consensus 19 ~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~-~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 19 ANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT-KAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCC
Confidence 456678888899999999998654431 12247778888765 3343322111 2335888889999999443222
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHc---CCCEEEECccccC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALAL---GASTAMMGSLLAG 464 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalal---GA~~v~~g~~l~~ 464 (590)
+.. .+.++.+.+++.++.++.+=.-.|+.+..+++.- |+|+|.+++.+.+
T Consensus 98 ~~~------------~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg 150 (228)
T 1h1y_A 98 SRD------------NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPG 150 (228)
T ss_dssp CTT------------THHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTT
T ss_pred ccc------------HHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCC
Confidence 211 2123333334456777765455677777778777 9999988877643
No 357
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=92.62 E-value=0.32 Score=48.14 Aligned_cols=122 Identities=10% Similarity=-0.033 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC--CceEE--ecc----cc---CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP--DMQVI--GGN----VL---FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~--~vpvi--~g~----v~---s~~~a~~l~~~Gvd~i~v 398 (590)
+..+.++...+.|+..++|+.. .+...++.+. ++++. ++. .. -..+++.+++.|||.||+
T Consensus 75 dI~~lc~eA~~~g~aaVCV~P~---------~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDm 145 (288)
T 3oa3_A 75 QIDVLCAEAKEYGFATVCVRPD---------YVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDM 145 (288)
T ss_dssp HHHHHHHHHHHHTCSEEEECGG---------GHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhcCCcEEEECHH---------HHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 3445667777889999998532 1222233332 34443 221 11 235778899999999997
Q ss_pred cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHH----HHHcCCCEEEECccc
Q psy1056 399 IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMK----ALALGASTAMMGSLL 462 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~k----alalGA~~v~~g~~l 462 (590)
-+..+..++ .+|.....-+..+.+.|....+.+|..-|..+..++.+ |..+|||+|=-.+-|
T Consensus 146 VINig~lk~--g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf 211 (288)
T 3oa3_A 146 VMNYPWLSE--KRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGF 211 (288)
T ss_dssp ECCHHHHHT--TCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSS
T ss_pred EeehhhhcC--CcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 433332100 11222333455566666543378899889999999766 556899999444433
No 358
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=92.49 E-value=1.3 Score=45.81 Aligned_cols=110 Identities=15% Similarity=0.214 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecC---------CCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSS---------QGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK 400 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~---------~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~ 400 (590)
...+.++.+.++|++++..... +|.....+..+..+++++ ++|++. ++.+.+.+..+.+. +|++.+.-
T Consensus 157 ~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~-Gl~~~t-e~~d~~~~~~l~~~-vd~lkIgs 233 (385)
T 3nvt_A 157 QVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY-GLGVIS-EIVTPADIEVALDY-VDVIQIGA 233 (385)
T ss_dssp HHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-TCEEEE-ECCSGGGHHHHTTT-CSEEEECG
T ss_pred HHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc-CCEEEE-ecCCHHHHHHHHhh-CCEEEECc
Confidence 4556788899999999876541 232333356666666666 788876 99999999999888 99997732
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCC-CCHHHHHHHHH----cCCCEE
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGV-QSVGHVMKALA----LGASTA 456 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi-~~~~di~kala----lGA~~v 456 (590)
.+.+. . .+.+.+.+.+.||+.+-|. .|..|+..|.. .|..-+
T Consensus 234 ~~~~n-------------~-~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i 280 (385)
T 3nvt_A 234 RNMQN-------------F-ELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKI 280 (385)
T ss_dssp GGTTC-------------H-HHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred ccccC-------------H-HHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 22222 1 2333444678999999999 99999987754 366544
No 359
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=92.42 E-value=1.1 Score=46.74 Aligned_cols=116 Identities=8% Similarity=0.001 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+....+.....++.++.+++.+ +++++.+.- .-+.+++. .|.+.|+++| +-
T Consensus 178 ~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~i----Eq 253 (398)
T 2pp0_A 178 QVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWI----EE 253 (398)
T ss_dssp HHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCE----EC
T ss_pred HHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCcee----eC
Confidence 3456677788899999988776555566688899999886 578887642 22556654 4455788877 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
- +... .......++ +..++||++++.+.+..++.+++..| +|.+++-
T Consensus 254 P-----~~~~--d~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 254 P-----LDAY--DIEGHAQLA---AALDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp C-----SCTT--CHHHHHHHH---HHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred C-----CChh--hHHHHHHHH---hhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 1 1000 222233333 34579999999999999999999988 6888664
No 360
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=92.30 E-value=1.5 Score=46.01 Aligned_cols=118 Identities=10% Similarity=-0.078 Sum_probs=80.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCc------hhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHHHCCCCE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGN------SIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATLLNFIYQ 395 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~------~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~~~Gvd~ 395 (590)
+...+.+..+++.|.+.+-+....|. ...-++.++.+|+.+ |++++++.- .-+.++|. .|.+.|+++
T Consensus 181 e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~ 260 (412)
T 3stp_A 181 EAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRW 260 (412)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCE
Confidence 34556777888899999999876541 234578889999887 578888642 22666654 455689998
Q ss_pred EEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 396 IEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 396 i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
| +- . +... ... ..++..+..++||++++-+.+..++.+++..| +|.|++-.
T Consensus 261 i----Ee--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~ 312 (412)
T 3stp_A 261 L----EE--P---VIAD--DVA---GYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDT 312 (412)
T ss_dssp E----EC--C---SCTT--CHH---HHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred E----EC--C---CCcc--cHH---HHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecCh
Confidence 8 21 1 1000 222 33333344679999999999999999999987 67886543
No 361
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.27 E-value=1.1 Score=46.60 Aligned_cols=118 Identities=7% Similarity=-0.062 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHH----HHHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQP----RATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a----~~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+..........++.++.+++.+ |++++.+.- .-+.+++ +.|.+.|+++| +-
T Consensus 152 ~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----Eq 227 (391)
T 2qgy_A 152 DYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWI----EE 227 (391)
T ss_dssp HHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEE----EC
T ss_pred HHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeE----eC
Confidence 4456777788899999988754322355678899999876 578888642 2255555 44556899988 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECcc
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSL 461 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~ 461 (590)
. +..+ ....+..++ +..++||++++.+.++.++.+++..| +|.|++-..
T Consensus 228 --P---~~~~--d~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 277 (391)
T 2qgy_A 228 --P---VDGE--NISLLTEIK---NTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDIS 277 (391)
T ss_dssp --S---SCTT--CHHHHHHHH---HHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred --C---CChh--hHHHHHHHH---hhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcc
Confidence 1 1100 222333333 34579999999999999999999987 688877533
No 362
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.25 E-value=2.4 Score=43.61 Aligned_cols=123 Identities=15% Similarity=0.066 Sum_probs=80.1
Q ss_pred eEEeEeeccc-----hhHHHHHHHHHHcCCcEEEEecC-------------C----------------CchhhHHHHHHH
Q psy1056 319 LIVGAAIGTR-----EADKNRLKLLSQAGVDVVILDSS-------------Q----------------GNSIYQIEMIKF 364 (590)
Q Consensus 319 l~v~a~i~~~-----~~~~e~~~~li~~gad~i~V~~~-------------~----------------G~~~~~l~~i~~ 364 (590)
.++.+.++.. +...+.++...++||+++-.... + +........+..
T Consensus 29 ~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~ 108 (385)
T 1vli_A 29 VFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLD 108 (385)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHH
T ss_pred cEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHH
Confidence 3555655432 23445677778889999865421 1 111123455666
Q ss_pred HHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHH
Q psy1056 365 IKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVG 443 (590)
Q Consensus 365 i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~ 443 (590)
.++.. +++++. ++.+.+.+..|.+.|+|++.| |-+.+. +..+...+ +.+.|||.+-|+.|-.
T Consensus 109 ~~~~~-Gi~~~s-tpfD~~svd~l~~~~vd~~KIgS~~~~N--------------~pLL~~va-~~gKPViLStGmaTl~ 171 (385)
T 1vli_A 109 YCREK-QVIFLS-TVCDEGSADLLQSTSPSAFKIASYEINH--------------LPLLKYVA-RLNRPMIFSTAGAEIS 171 (385)
T ss_dssp HHHHT-TCEEEC-BCCSHHHHHHHHTTCCSCEEECGGGTTC--------------HHHHHHHH-TTCSCEEEECTTCCHH
T ss_pred HHHHc-CCcEEE-ccCCHHHHHHHHhcCCCEEEECcccccC--------------HHHHHHHH-hcCCeEEEECCCCCHH
Confidence 66665 677654 899999999999999999987 333221 12334333 4689999999999999
Q ss_pred HHHHHHH----cCC-CEEEE
Q psy1056 444 HVMKALA----LGA-STAMM 458 (590)
Q Consensus 444 di~kala----lGA-~~v~~ 458 (590)
++..|.. .|. +.+.+
T Consensus 172 Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 172 DVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp HHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHHCCCCcEEEE
Confidence 9988764 476 44443
No 363
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.14 E-value=0.82 Score=45.08 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=64.6
Q ss_pred HHHHHHHHHcCCcEEEEec--CCCchhhHHHHHHHHHHhCCCceEEeccc----cCc-HHHHHHHHCCCCEEEEcccccc
Q psy1056 332 KNRLKLLSQAGVDVVILDS--SQGNSIYQIEMIKFIKKEYPDMQVIGGNV----LFG-YQPRATLLNFIYQIEMIKFIKK 404 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~--~~G~~~~~l~~i~~i~~~~~~vpvi~g~v----~s~-~~a~~l~~~Gvd~i~v~~~~~~ 404 (590)
.+.+..+.++|++.+++-. .+|.. ......+.+...- ..++...-- .++ +..++|+++|++-|-.+.. .
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~i-D~~~~~~Li~~a~-~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~--~ 189 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHI-DKELCMSLMAICR-PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGC--D 189 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCB-CHHHHHHHHHHHT-TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTT--S
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCc-CHHHHHHHHHHcC-CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCC--C
Confidence 3467788899999999865 44432 1111222222322 467775433 234 4446788899998822211 0
Q ss_pred cCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH-cCCCEE
Q psy1056 405 EYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA-LGASTA 456 (590)
Q Consensus 405 ~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala-lGA~~v 456 (590)
. ..-. ....|.++.+.+. ..++|++.||| +...+.+-++ .|++.+
T Consensus 190 ~---~a~~--Gl~~Lk~Lv~~a~-~rI~ImaGGGV-~~~Ni~~l~~~tG~~~~ 235 (287)
T 3iwp_A 190 S---SALE--GLPLIKRLIEQAK-GRIVVMPGGGI-TDRNLQRILEGSGATEF 235 (287)
T ss_dssp S---STTT--THHHHHHHHHHHT-TSSEEEECTTC-CTTTHHHHHHHHCCSEE
T ss_pred C---ChHH--hHHHHHHHHHHhC-CCCEEEECCCc-CHHHHHHHHHhhCCCEE
Confidence 0 0011 2233444444332 25999999999 4566666555 899999
No 364
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=92.13 E-value=0.83 Score=47.33 Aligned_cols=118 Identities=10% Similarity=-0.008 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHH----HHHHHC-CCCEEEEcc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQP----RATLLN-FIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a----~~l~~~-Gvd~i~v~~ 400 (590)
+...+.+..+.+.|.+.+-+...+++....++.++.+++.+ +++++.+.- .-+.++| +.|.+. |+++|
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~i---- 216 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWL---- 216 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEE----
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEE----
Confidence 34456677788899999998877655666788899999877 578888642 2255655 344456 77777
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+-- +. ...+...++..+..++||++++.+.+..++.+++..| +|.+++-.
T Consensus 217 EqP-----~~-----~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 267 (382)
T 2gdq_A 217 EEP-----LP-----FDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDV 267 (382)
T ss_dssp ECC-----SC-----SSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCT
T ss_pred ECC-----CC-----cccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 211 10 0112233444445579999999999999999999987 68886643
No 365
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.86 E-value=2.5 Score=43.06 Aligned_cols=112 Identities=15% Similarity=0.076 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHcCCcEEEEec--------C-----CC---------------chhhHHHHHHHHHHhCCCceEEeccccC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDS--------S-----QG---------------NSIYQIEMIKFIKKEYPDMQVIGGNVLF 381 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~--------~-----~G---------------~~~~~l~~i~~i~~~~~~vpvi~g~v~s 381 (590)
...+.++...++|++++-... . ++ ........+...++.. +++++. ++.+
T Consensus 36 ~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~-Gi~~~s-t~~d 113 (349)
T 2wqp_A 36 TAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK-GMIFIS-TLFS 113 (349)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT-TCEEEE-EECS
T ss_pred HHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh-CCeEEE-eeCC
Confidence 445567788889999986642 1 11 1122345556666665 677665 8999
Q ss_pred cHHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH----cCCCEE
Q psy1056 382 GYQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA----LGASTA 456 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala----lGA~~v 456 (590)
.+.+..|.+.|+|++.| |-+.+. +..+...+ +.+.|||.+-|+.|-.++..|.. .|.+.+
T Consensus 114 ~~svd~l~~~~v~~~KI~S~~~~n--------------~~LL~~va-~~gkPviLstGmat~~Ei~~Ave~i~~~G~~ii 178 (349)
T 2wqp_A 114 RAAALRLQRMDIPAYKIGSGECNN--------------YPLIKLVA-SFGKPIILSTGMNSIESIKKSVEIIREAGVPYA 178 (349)
T ss_dssp HHHHHHHHHHTCSCEEECGGGTTC--------------HHHHHHHH-TTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhcCCCEEEECcccccC--------------HHHHHHHH-hcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999977 322221 12333333 46899999999999999987753 577766
Q ss_pred EE
Q psy1056 457 MM 458 (590)
Q Consensus 457 ~~ 458 (590)
.+
T Consensus 179 Ll 180 (349)
T 2wqp_A 179 LL 180 (349)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 366
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=91.82 E-value=2.5 Score=43.36 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=78.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEeccc--cCcHHHH-HHHH----CCCCEEEEcc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGNV--LFGYQPR-ATLL----NFIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~~~a~-~l~~----~Gvd~i~v~~ 400 (590)
+...+.+..+.+.|.+.+-++..+ +....++.++.+++.+ |++++.+.-- -+.+++. ++.+ .|+++|
T Consensus 143 ~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~i---- 217 (369)
T 2p8b_A 143 ENMAEEAASMIQKGYQSFKMKVGT-NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWI---- 217 (369)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCE----
T ss_pred HHHHHHHHHHHHcCcCEEEEEeCC-CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEE----
Confidence 344567777888999999887654 3455678899999877 5788876422 2666665 5443 677776
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+- . + .. ..+...++..+..++||++++.+.++.++.+++..| +|.|++-.
T Consensus 218 Eq--P---~---~~--~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 218 EQ--P---V---IA--DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp EC--C---B---CT--TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EC--C---C---Cc--ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeec
Confidence 21 1 1 11 112223333344579999999999999999999986 78888854
No 367
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=91.80 E-value=1.9 Score=42.95 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=64.3
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEec-cccC---cH----------------HHHHHHHCCC
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-NVLF---GY----------------QPRATLLNFI 393 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~s---~~----------------~a~~l~~~Gv 393 (590)
.+..+.+.|+|.+.++...|.. .++......+.+...|.+++ .+.| .+ -|+.+.++|+
T Consensus 95 av~~~a~lGaD~vTVHa~~G~~--~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~ 172 (303)
T 3ru6_A 95 ACEEVSKLGVDMINIHASAGKI--AIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGL 172 (303)
T ss_dssp HHHHHHTTTCSEEEEEGGGCHH--HHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCEEEEeccCCHH--HHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCC
Confidence 4566777899999998876632 22222222222322233321 2221 11 2334556888
Q ss_pred CEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHH----------HHHHHHHcCCCEEEECcccc
Q psy1056 394 YQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVG----------HVMKALALGASTAMMGSLLA 463 (590)
Q Consensus 394 d~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~----------di~kalalGA~~v~~g~~l~ 463 (590)
+++ +|...+ +..+++.+.. -.++..+||+-.+ .+..|+..|||.+++|+++.
T Consensus 173 dGv---V~s~~E-------------~~~IR~~~~~--~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~ 234 (303)
T 3ru6_A 173 DGM---VCSVFE-------------SKKIKEHTSS--NFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIY 234 (303)
T ss_dssp SEE---ECCTTT-------------HHHHHHHSCT--TSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHHH
T ss_pred CEE---EECHHH-------------HHHHHHhCCC--ccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHh
Confidence 887 453332 3345554422 3577889998332 36667788999999999886
Q ss_pred CC
Q psy1056 464 GT 465 (590)
Q Consensus 464 ~~ 465 (590)
.+
T Consensus 235 ~a 236 (303)
T 3ru6_A 235 KN 236 (303)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 368
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.72 E-value=0.24 Score=50.90 Aligned_cols=135 Identities=28% Similarity=0.351 Sum_probs=112.4
Q ss_pred EeccccccccCCCCCCC-C-ccCCcc--cccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCc--------
Q psy1056 69 VTSRDVDFLENSANMDL-K-IEKDLS--SPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTRE-------- 136 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~-~-~~~~~~--~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~-------- 136 (590)
+|++ |+++.|+.+.. + +++|++ +.+ ..+.++.|+++++|+++++..++.+++..||+|++|.+.+
T Consensus 8 ~~fd--dv~l~P~~~~~~~r~~vd~~~~t~l-~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i 84 (361)
T 3r2g_A 8 ITFD--DVLLVPSYNHHESRRVVETTSTDRL-GKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEF 84 (361)
T ss_dssp CCGG--GEEECCCCCCSCTTCCCCCCEECTT-SSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHH
T ss_pred cccc--eEEEECCCCCCCccccccceeeEEE-CCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHH
Confidence 7888 88888998877 5 575544 477 5788899999999999999999999999999999998743
Q ss_pred ---------------chHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhcc
Q psy1056 137 ---------------ADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVD 201 (590)
Q Consensus 137 ---------------d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~ 201 (590)
+..++++.++++|+|+|.+|.++++.....+.++++++.++...++.+++.+.+..+.+.+..+|
T Consensus 85 ~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD 164 (361)
T 3r2g_A 85 KKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGAD 164 (361)
T ss_dssp HTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCS
T ss_pred hhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCC
Confidence 24677888999999999999999998888889999998666666777777776677888888888
Q ss_pred ccccc
Q psy1056 202 GLRVG 206 (590)
Q Consensus 202 ~~~v~ 206 (590)
+|+||
T Consensus 165 ~I~Vg 169 (361)
T 3r2g_A 165 IIKAG 169 (361)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88776
No 369
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=91.40 E-value=2 Score=44.48 Aligned_cols=119 Identities=7% Similarity=-0.022 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-ccc-CcHHH----HHHHHCCCCEEEEccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-NVL-FGYQP----RATLLNFIYQIEMIKF 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~v~-s~~~a----~~l~~~Gvd~i~v~~~ 401 (590)
+...+.++.+.+.|.+.+-+.... +...-++.++.+++.+ |+.++.+. |.+ +.++| +.|.+.|+++| +
T Consensus 153 e~~~~~a~~~~~~G~~~iKiKvG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i----E 227 (389)
T 3ozy_A 153 DQAADELAGWVEQGFTAAKLKVGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWF----E 227 (389)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEE----E
T ss_pred HHHHHHHHHHHHCCCCEEeeccCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEE----E
Confidence 445567788888999999887643 3455678899999887 57888864 222 56655 45667899998 2
Q ss_pred ccccCCCccccccchhHHHHHHHHH-hcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYA-SRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~-~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
- . +. ...+...++.. ...++||++++.+.+..|+.+++..| +|.|++-...
T Consensus 228 q--P---~~-----~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~ 280 (389)
T 3ozy_A 228 E--P---LS-----IDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASR 280 (389)
T ss_dssp S--C---SC-----TTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred C--C---CC-----cccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccc
Confidence 1 1 11 11123344444 45679999999999999999999886 6888776444
No 370
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=91.40 E-value=3.4 Score=43.45 Aligned_cols=117 Identities=15% Similarity=0.066 Sum_probs=78.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC------C------chhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHH
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ------G------NSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATL 389 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~------G------~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~ 389 (590)
+...+.++..++.|...+-+.... | +....++.++.+|+.+ +++++++.- .-+.++|. .|.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le 227 (433)
T 3rcy_A 148 DMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIE 227 (433)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhh
Confidence 455667788889999999887542 1 1234578889999887 578888642 22666654 455
Q ss_pred HCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 390 LNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 390 ~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
+.|+++| +-- +... ....+..++ +..++||++++.+.+..|+.+++..| +|.+++-
T Consensus 228 ~~~i~~i----EeP-----~~~~--~~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d 284 (433)
T 3rcy_A 228 PYSPLWY----EEP-----VPPD--NVGAMAQVA---RAVRIPVATGERLTTKAEFAPVLREGAAAILQPA 284 (433)
T ss_dssp GGCCSEE----ECC-----SCTT--CHHHHHHHH---HHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred hcCCCEE----ECC-----CChh--hHHHHHHHH---hccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 5888888 211 1000 222333333 34579999999999999999999987 6888664
No 371
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=91.38 E-value=2.1 Score=43.89 Aligned_cols=118 Identities=13% Similarity=0.056 Sum_probs=80.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecccc--CcHHH----HHHHH--CCCCEEEEc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGNVL--FGYQP----RATLL--NFIYQIEMI 399 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~v~--s~~~a----~~l~~--~Gvd~i~v~ 399 (590)
+...+.+..+.+.|.+.+-+....++....++.++.+++.+ |++++.+.-=. +.++| +.|.+ .|+++|
T Consensus 142 ~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~i--- 218 (366)
T 1tkk_A 142 EEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELV--- 218 (366)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEE---
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEE---
Confidence 34456677778889999988776545566688899999877 57888764222 55555 45666 777777
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+- . +... ....+..++ +..++||++++-+.+..++.+++..| +|.+++-.
T Consensus 219 -Eq--P---~~~~--d~~~~~~l~---~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 269 (366)
T 1tkk_A 219 -EQ--P---VHKD--DLAGLKKVT---DATDTPIMADESVFTPRQAFEVLQTRSADLINIKL 269 (366)
T ss_dssp -EC--C---SCTT--CHHHHHHHH---HHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred -EC--C---CCcc--cHHHHHHHH---hhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeeh
Confidence 21 1 1000 222333333 34579999999999999999999877 78887754
No 372
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=91.24 E-value=3.3 Score=42.59 Aligned_cols=117 Identities=13% Similarity=0.018 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEeccc--cCcHHHHHHHH---CCCCEEEEcccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGNV--LFGYQPRATLL---NFIYQIEMIKFI 402 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~~~a~~l~~---~Gvd~i~v~~~~ 402 (590)
+...+.+..+.+.|.+.+-+....++....++.++.+++.+ +++++.+.-- -+.+++.++.+ .|+ +| +
T Consensus 147 e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~i----E- 220 (378)
T 2qdd_A 147 DQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WI----E- 220 (378)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EE----E-
T ss_pred HHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EE----E-
Confidence 34456677788889999998876655566788999999987 4788876422 26777766554 355 54 2
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
.. +. .+...++..+..++||++++-+.++.++.+++..| +|.|++....
T Consensus 221 -qP---~~-------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 221 -QP---CQ-------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp -CC---SS-------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred -cC---CC-------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccc
Confidence 11 11 12233444445579999999999999999999877 7888886433
No 373
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=91.07 E-value=0.61 Score=49.30 Aligned_cols=69 Identities=13% Similarity=0.160 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--------------ch-----hhHHHHHHHHHHhCC-CceEE-eccccCcHHHHHH
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--------------NS-----IYQIEMIKFIKKEYP-DMQVI-GGNVLFGYQPRAT 388 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--------------~~-----~~~l~~i~~i~~~~~-~vpvi-~g~v~s~~~a~~l 388 (590)
+..+.++.+.++|+|.+.+..... .+ ...++.+..+++..+ ++||| +|+|.|.++|.+.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~ 391 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 391 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHH
Confidence 456678899999999998865311 11 113578888888874 68988 7899999999999
Q ss_pred HHCCCCEEEE
Q psy1056 389 LLNFIYQIEM 398 (590)
Q Consensus 389 ~~~Gvd~i~v 398 (590)
+.+|||.|-+
T Consensus 392 l~aGAd~Vqi 401 (443)
T 1tv5_A 392 IEAGASVCQL 401 (443)
T ss_dssp HHTTEEEEEE
T ss_pred HHcCCCEEEE
Confidence 9999999833
No 374
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=91.02 E-value=2.2 Score=41.59 Aligned_cols=129 Identities=12% Similarity=0.095 Sum_probs=70.5
Q ss_pred ceEEeEeeccchhH-HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC-C--ce-EEecccc-Cc---------
Q psy1056 318 QLIVGAAIGTREAD-KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP-D--MQ-VIGGNVL-FG--------- 382 (590)
Q Consensus 318 ~l~v~a~i~~~~~~-~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~--vp-vi~g~v~-s~--------- 382 (590)
.++....+..-+.+ ...++.+.+.|+|.+.|+..-|.. .+...++.+++..+ + .| +++=.+. |.
T Consensus 58 ~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~G~~-~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~ 136 (259)
T 3tfx_A 58 KIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALGGSQ-MIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQ 136 (259)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHH-HHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTS
T ss_pred cEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCCCHH-HHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHh
Confidence 33444444332333 234566778899999998876632 22223333333211 1 22 3321222 21
Q ss_pred -----------HHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHH-------
Q psy1056 383 -----------YQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGH------- 444 (590)
Q Consensus 383 -----------~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~d------- 444 (590)
+-|+.+.++|+|++ +|...+ +..+++.+.. -.++...|||-.++
T Consensus 137 g~~~~~~e~v~~~A~~a~~~G~dGv---V~s~~e-------------~~~ir~~~~~--~f~~vtPGIr~~g~~~gDQ~R 198 (259)
T 3tfx_A 137 NCRLPMAEQVLSLAKMAKHSGADGV---ICSPLE-------------VKKLHENIGD--DFLYVTPGIRPAGNAKDDQSR 198 (259)
T ss_dssp CBSSCHHHHHHHHHHHHHHTTCCEE---ECCGGG-------------HHHHHHHHCS--SSEEEECCCCCC---------
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEE---EECHHH-------------HHHHHhhcCC--ccEEEcCCcCCCCCCcCCccc
Confidence 12344456788877 444332 3455655532 34677889986432
Q ss_pred ---HHHHHHcCCCEEEECccccCC
Q psy1056 445 ---VMKALALGASTAMMGSLLAGT 465 (590)
Q Consensus 445 ---i~kalalGA~~v~~g~~l~~~ 465 (590)
+..|+..|||.+++|+++..+
T Consensus 199 v~T~~~a~~aGad~iVvGr~I~~a 222 (259)
T 3tfx_A 199 VATPKMAKEWGSSAIVVGRPITLA 222 (259)
T ss_dssp --CHHHHHHTTCSEEEECHHHHTS
T ss_pred cCCHHHHHHcCCCEEEEChHHhCC
Confidence 778899999999999988544
No 375
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.86 E-value=0.65 Score=47.58 Aligned_cols=68 Identities=13% Similarity=0.250 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC---Cchh--------hHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ---GNSI--------YQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIE 397 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~---G~~~--------~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~ 397 (590)
+..+.++.+.++|++.++++... |... ...+.+..+++.+|++||++ |++.|.+++.++++ |+|+|-
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~ 223 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVM 223 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEE
Confidence 45677888999999999997632 2110 12577888999887899985 77789999999998 999995
Q ss_pred E
Q psy1056 398 M 398 (590)
Q Consensus 398 v 398 (590)
+
T Consensus 224 i 224 (350)
T 3b0p_A 224 L 224 (350)
T ss_dssp E
T ss_pred E
Confidence 5
No 376
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.85 E-value=0.82 Score=43.15 Aligned_cols=116 Identities=7% Similarity=-0.036 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCc-hhh---HHHHHHHHHHhCCCceEEeccc-cCc-HHHHHHHHCCCCEEEEcccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGN-SIY---QIEMIKFIKKEYPDMQVIGGNV-LFG-YQPRATLLNFIYQIEMIKFI 402 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~-~~~---~l~~i~~i~~~~~~vpvi~g~v-~s~-~~a~~l~~~Gvd~i~v~~~~ 402 (590)
.+..+.++.+.+.|++.++++...|. ... -.+.++.+++.. +.|+.++-. .+. +.++.+.++|+|++-+....
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~-~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS-KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC-CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC-CCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCc
Confidence 45667888888999999888765454 111 167888888876 566665433 233 35788999999999442111
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
. . . ..++.+.+.+.+..++.+=...|+.+..+++..++|.|.+
T Consensus 95 ~-~---------~---~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~ 137 (220)
T 2fli_A 95 T-R---------H---IHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLI 137 (220)
T ss_dssp C-S---------C---HHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEE
T ss_pred c-c---------c---HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEE
Confidence 1 1 1 2233344444466666643336788888888888999843
No 377
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=90.84 E-value=3.1 Score=40.59 Aligned_cols=105 Identities=11% Similarity=0.133 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC---------CchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ---------GNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI 399 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~---------G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~ 399 (590)
+...+.++.+.++|++++-..... |.....+..+..+++++ ++|++. ++.+.+.+..+.+. +|++.+.
T Consensus 37 e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~-Gl~~~t-e~~d~~~~~~l~~~-vd~~kIg 113 (262)
T 1zco_A 37 EQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY-GLVTVT-EVMDTRHVELVAKY-SDILQIG 113 (262)
T ss_dssp HHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-TCEEEE-ECCCGGGHHHHHHH-CSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc-CCcEEE-eeCCHHhHHHHHhh-CCEEEEC
Confidence 445667888899999988765421 22233355666666665 788876 99999999999999 9999773
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCC-CHHHHHHHHH
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQ-SVGHVMKALA 450 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~-~~~di~kala 450 (590)
-.+.+. ...+++.+ +.+.||+.+-|.. |..++..|..
T Consensus 114 a~~~~n-------------~~ll~~~a-~~~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 114 ARNSQN-------------FELLKEVG-KVENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp GGGTTC-------------HHHHHHHT-TSSSCEEEECCTTCCHHHHHHHHH
T ss_pred cccccC-------------HHHHHHHH-hcCCcEEEecCCCCCHHHHHHHHH
Confidence 222222 12234333 4689999999997 9999998874
No 378
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=90.77 E-value=0.57 Score=47.58 Aligned_cols=68 Identities=18% Similarity=0.164 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC----------------Cch-----hhHHHHHHHHHHhCC-CceEE-eccccCcHHHH
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ----------------GNS-----IYQIEMIKFIKKEYP-DMQVI-GGNVLFGYQPR 386 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~----------------G~~-----~~~l~~i~~i~~~~~-~vpvi-~g~v~s~~~a~ 386 (590)
+..+.++.+.++|+|.+.+.... |.. ...++.++.+++..+ ++||+ .|+|.+.++|.
T Consensus 226 ~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~ 305 (336)
T 1f76_A 226 ELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAR 305 (336)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHH
Confidence 45667888999999999886321 111 123577888888764 68988 68888999999
Q ss_pred HHHHCCCCEEE
Q psy1056 387 ATLLNFIYQIE 397 (590)
Q Consensus 387 ~l~~~Gvd~i~ 397 (590)
+++++|||+|-
T Consensus 306 ~~l~~GAd~V~ 316 (336)
T 1f76_A 306 EKIAAGASLVQ 316 (336)
T ss_dssp HHHHHTCSEEE
T ss_pred HHHHCCCCEEE
Confidence 99999999993
No 379
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=90.76 E-value=2.8 Score=43.57 Aligned_cols=120 Identities=13% Similarity=-0.024 Sum_probs=81.6
Q ss_pred hhHHHHH-HHHHHcCCcEEEEecCCC------chhhHHHHHHHHHHhC-CCceEEec-cc-cCcHHH----HHHHHCCCC
Q psy1056 329 EADKNRL-KLLSQAGVDVVILDSSQG------NSIYQIEMIKFIKKEY-PDMQVIGG-NV-LFGYQP----RATLLNFIY 394 (590)
Q Consensus 329 ~~~~e~~-~~li~~gad~i~V~~~~G------~~~~~l~~i~~i~~~~-~~vpvi~g-~v-~s~~~a----~~l~~~Gvd 394 (590)
+...+.+ +..++.|...+-+..... +...-++.++.+++.+ +++++++. |. -+.++| +.|.+.|++
T Consensus 141 e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 220 (393)
T 4dwd_A 141 DEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYS 220 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCC
Confidence 3445566 777888999998876432 3455678899999886 57888864 22 266665 456678999
Q ss_pred EEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 395 QIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 395 ~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
+| +- . +... .... .++..+..++||++++-+.+..|+.+++..|+|.+++-...
T Consensus 221 ~i----Eq--P---~~~~--d~~~---~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~~~ 274 (393)
T 4dwd_A 221 WF----EE--P---VQHY--HVGA---MGEVAQRLDITVSAGEQTYTLQALKDLILSGVRMVQPDIVK 274 (393)
T ss_dssp EE----EC--C---SCTT--CHHH---HHHHHHHCSSEEEBCTTCCSHHHHHHHHHHTCCEECCCTTT
T ss_pred EE----EC--C---CCcc--cHHH---HHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCEEEeCccc
Confidence 88 21 1 1100 2222 33333345799999999999999999999999999776443
No 380
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=90.56 E-value=0.76 Score=47.99 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC--------------Cc---h--hhHHHHHHHHHHhCC-CceEE-eccccCcHHHHHH
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ--------------GN---S--IYQIEMIKFIKKEYP-DMQVI-GGNVLFGYQPRAT 388 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~--------------G~---~--~~~l~~i~~i~~~~~-~vpvi-~g~v~s~~~a~~l 388 (590)
+..+.++.+.++|+|.+++.... |. . ...++.+..+++..+ ++||| .|+|.|.++|.++
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~ 363 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 363 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHH
Confidence 46678889999999999876421 11 1 123578888888874 68988 6888999999999
Q ss_pred HHCCCCEEEE
Q psy1056 389 LLNFIYQIEM 398 (590)
Q Consensus 389 ~~~Gvd~i~v 398 (590)
+.+|||++-|
T Consensus 364 l~aGAd~VqI 373 (415)
T 3i65_A 364 IEAGASVCQL 373 (415)
T ss_dssp HHHTEEEEEE
T ss_pred HHcCCCEEEE
Confidence 9999999843
No 381
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=90.54 E-value=0.74 Score=47.47 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC----------------Cch-----hhHHHHHHHHHHhCC-CceEE-eccccCcHHHH
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ----------------GNS-----IYQIEMIKFIKKEYP-DMQVI-GGNVLFGYQPR 386 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~----------------G~~-----~~~l~~i~~i~~~~~-~vpvi-~g~v~s~~~a~ 386 (590)
+..+.++.+.++|+|.++++... |.+ ...++.+..+++..+ ++||| .|+|.|.++|.
T Consensus 235 ~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~ 314 (367)
T 3zwt_A 235 DKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDAL 314 (367)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHH
Confidence 45678888899999999876321 111 113578899999885 68988 68899999999
Q ss_pred HHHHCCCCEEEE
Q psy1056 387 ATLLNFIYQIEM 398 (590)
Q Consensus 387 ~l~~~Gvd~i~v 398 (590)
+++++|||+|-+
T Consensus 315 ~~l~~GAd~V~v 326 (367)
T 3zwt_A 315 EKIRAGASLVQL 326 (367)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999943
No 382
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=90.44 E-value=15 Score=40.01 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHH---HHHCCCCEEEE-----cc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRA---TLLNFIYQIEM-----IK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~---l~~~Gvd~i~v-----~~ 400 (590)
+...+-+...++.++|++.+...+. ...+.+.-+.+.+.-.+.++++ -+-+++.... .+++ +|+|-| .+
T Consensus 193 ekD~~dl~f~~~~~vD~Ia~SFVr~-a~Dv~~~r~~l~~~~~~i~Iia-KIE~~eav~nldeIl~~-sDGImVARGDLgv 269 (606)
T 3t05_A 193 EKDAEDIRFGIKENVDFIAASFVRR-PSDVLEIREILEEQKANISVFP-KIENQEGIDNIEEILEV-SDGLMVARGDMGV 269 (606)
T ss_dssp HHHHHHHHHHHHTTCSEEEETTCCS-HHHHHHHHHHHHHTTCCCEEEE-CCCSHHHHHTHHHHHHH-CSCEEEEHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEECCCCC-HHHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHhHHHHHHh-CCEEEEccccccC
Confidence 3444556677889999998754332 2333333344444433566665 4555555433 3334 788866 22
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCC---------C---HHHHHHHHHcCCCEEEEC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQ---------S---VGHVMKALALGASTAMMG 459 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~---------~---~~di~kalalGA~~v~~g 459 (590)
+...+ . -+..-..+...|...+.|+|..--+. | ..|++.|..-|||+||+.
T Consensus 270 ei~~e-----~---vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLS 332 (606)
T 3t05_A 270 EIPPE-----K---VPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLS 332 (606)
T ss_dssp HSCGG-----G---HHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEEC
T ss_pred cCCHH-----H---HHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEec
Confidence 21111 1 11112233444555578999744332 2 258899999999999997
No 383
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=90.43 E-value=2.1 Score=41.58 Aligned_cols=124 Identities=14% Similarity=0.009 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE--ecccc-------CcHHHHHHHHCCCCEEEEcc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI--GGNVL-------FGYQPRATLLNFIYQIEMIK 400 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi--~g~v~-------s~~~a~~l~~~Gvd~i~v~~ 400 (590)
+..+..+...+.|+..++|+.. ++...-+.++.. ++.+. ++.-. -..+++++++.|||-||+-+
T Consensus 60 ~I~~lc~eA~~~~~aaVCV~p~-----~V~~a~~~L~gs--~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVi 132 (260)
T 3r12_A 60 DIKKLCLEARENRFHGVCVNPC-----YVKLAREELEGT--DVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVI 132 (260)
T ss_dssp HHHHHHHHHHHTTCSEEEECGG-----GHHHHHHHHTTS--CCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHhcCCcEEEECHH-----HHHHHHHHhcCC--CCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4445677777889999998432 122222223221 34333 22111 13477889999999999843
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHH----HHcCCCEEEECccc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKA----LALGASTAMMGSLL 462 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~ka----lalGA~~v~~g~~l 462 (590)
..+..++ ..|.....-+..+.+++...-+.+|..-|..+..++.+| ..+|||+|=-.+-|
T Consensus 133 Nig~lk~--g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf 196 (260)
T 3r12_A 133 NVGMLKA--KEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGF 196 (260)
T ss_dssp CHHHHHT--TCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSS
T ss_pred ehhhhcc--ccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCC
Confidence 3332100 122223334555666665334678888889999998874 45799999444433
No 384
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=90.36 E-value=3.6 Score=42.62 Aligned_cols=117 Identities=15% Similarity=0.045 Sum_probs=78.8
Q ss_pred hhHHHHHHHHHHc---CCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-c-ccCcHHHH----HHHHCCCCEEEE
Q psy1056 329 EADKNRLKLLSQA---GVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-N-VLFGYQPR----ATLLNFIYQIEM 398 (590)
Q Consensus 329 ~~~~e~~~~li~~---gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~-v~s~~~a~----~l~~~Gvd~i~v 398 (590)
+...+.++.+++. |...+-+.....+...-++.++.+++.+ |++++.+. | .-+.++|. .|.+.|+++|
T Consensus 173 e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i-- 250 (390)
T 3ugv_A 173 EVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWI-- 250 (390)
T ss_dssp HHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEE--
T ss_pred HHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE--
Confidence 3445667777888 9999988775545555678899999887 57888864 2 22666654 4445788888
Q ss_pred cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 399 IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
+- . +... ... ..++..+..++||.++.-+.+..|+.+++..| +|.+++-
T Consensus 251 --Eq--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik 300 (390)
T 3ugv_A 251 --EE--P---VVYD--NFD---GYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPD 300 (390)
T ss_dssp --EC--C---SCTT--CHH---HHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred --EC--C---CCcc--cHH---HHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 21 1 1100 222 23333344579999999999999999999987 5777543
No 385
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=90.24 E-value=5.6 Score=41.03 Aligned_cols=120 Identities=10% Similarity=0.034 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHc-CCcEEEEecCCCchhhHHHHHHHHHHhCC-CceEEec-cc-cCcHHH----HHHHHCCCCEEEEcc
Q psy1056 329 EADKNRLKLLSQA-GVDVVILDSSQGNSIYQIEMIKFIKKEYP-DMQVIGG-NV-LFGYQP----RATLLNFIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~-gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~vpvi~g-~v-~s~~~a----~~l~~~Gvd~i~v~~ 400 (590)
+...+.+...++. |...+-+.....+...-++.++.+++.++ ++++.+. |. -+.++| +.|.+.|+++|
T Consensus 150 ~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i---- 225 (383)
T 3i4k_A 150 DVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELF---- 225 (383)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEE----
T ss_pred HHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE----
Confidence 3445566666776 99999887755455566888999999985 5788764 22 255655 45666899988
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
+- . +... ....+..+++ ..++||++++-+.+..|+.+++..| +|.|++-...
T Consensus 226 Eq--P---~~~~--d~~~~~~l~~---~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~ 278 (383)
T 3i4k_A 226 EQ--P---TPAD--DLETLREITR---RTNVSVMADESVWTPAEALAVVKAQAADVIALKTTK 278 (383)
T ss_dssp ES--C---SCTT--CHHHHHHHHH---HHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTT
T ss_pred EC--C---CChh--hHHHHHHHHh---hCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccc
Confidence 21 1 1100 2233334443 3469999999999999999999988 7888887544
No 386
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=90.22 E-value=2.9 Score=43.35 Aligned_cols=115 Identities=16% Similarity=0.126 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+.... +....++.++.+++.+ +++++.+.- .-+.++|. .|.+.|+++| +-
T Consensus 148 ~~~~~a~~~~~~Gf~~vKik~g~-~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----Eq 222 (397)
T 2qde_A 148 AVAEEALAVLREGFHFVKLKAGG-PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKI----EQ 222 (397)
T ss_dssp HHHHHHHHHHHHTCSCEEEECCS-CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE----EC
T ss_pred HHHHHHHHHHHhhhhheeecccC-CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEE----EC
Confidence 44566777888899999887653 3345578889999886 578887642 22666654 4555788877 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
- + ....+...++..+..++||++++.+.+..++.+++..| +|.+++-
T Consensus 223 P-----~-----~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 270 (397)
T 2qde_A 223 P-----L-----PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIK 270 (397)
T ss_dssp C-----S-----CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred C-----C-----ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEe
Confidence 1 1 11112233444444579999999999999999999886 7888874
No 387
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=90.19 E-value=2.7 Score=40.23 Aligned_cols=115 Identities=14% Similarity=0.104 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE--ecc----cc---CcHHHHHHHHCCCCEEEEc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI--GGN----VL---FGYQPRATLLNFIYQIEMI 399 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi--~g~----v~---s~~~a~~l~~~Gvd~i~v~ 399 (590)
.+..+..+...+.|++.++++.. ++ ...+.++.. +++.+. ++. -. -..+++.+++.|||.||+-
T Consensus 36 ~~i~~l~~~a~~~~~~aVcv~p~-----~v-~a~~~l~~~-~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdEID~v 108 (234)
T 1n7k_A 36 EDVRNLVREASDYGFRCAVLTPV-----YT-VKISGLAEK-LGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATELDVV 108 (234)
T ss_dssp HHHHHHHHHHHHHTCSEEEECHH-----HH-HHHHHHHHH-HTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEEchH-----Hh-eeehHhCCC-CCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 34556777888889999987432 22 223334332 123332 211 11 1267788999999999884
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcE--EecCCCCCHHHHHH----HHHcCCCEE
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPV--IADGGVQSVGHVMK----ALALGASTA 456 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~i--ia~GGi~~~~di~k----alalGA~~v 456 (590)
+..+.. .. ....-+..+.+.|...++|+ |..-+..+..++.+ |..+|||+|
T Consensus 109 inig~~---~~---~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ria~eaGADfV 165 (234)
T 1n7k_A 109 PHLSLG---PE---AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDSSRRAGADIV 165 (234)
T ss_dssp CCGGGC---HH---HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHHHHHTTCSEE
T ss_pred ccchHH---HH---HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHHHHHhCCCEE
Confidence 433322 11 12233455666666556675 88778888888876 456799999
No 388
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=90.15 E-value=0.52 Score=45.71 Aligned_cols=128 Identities=17% Similarity=0.142 Sum_probs=69.1
Q ss_pred HHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHh--CC-Cce-EEeccccCcHHHHHH-HHCCCC--EEEEcccccccC
Q psy1056 334 RLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKE--YP-DMQ-VIGGNVLFGYQPRAT-LLNFIY--QIEMIKFIKKEY 406 (590)
Q Consensus 334 ~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~--~~-~vp-vi~g~v~s~~~a~~l-~~~Gvd--~i~v~~~~~~~~ 406 (590)
.++.+.+.|+|.+.++..-|.. .+...++.+++. +. ..+ +++=+..|......+ .+.|++ ..+.-...++..
T Consensus 74 ~~~~~~~~Gad~vTvH~~~g~~-~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~ 152 (246)
T 2yyu_A 74 AMKGLARVGADLVNVHAAGGRR-MMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEELWISRPLVETVAHYAALA 152 (246)
T ss_dssp HHHHHHHTTCSEEEEEGGGCHH-HHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCCCHH-HHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 5677889999999998866532 233556666652 31 234 443344444344455 555431 111000110000
Q ss_pred CCcccccc--chhHHHHHHHHHhcCCCcEEecCCCCCH-H---------HHHHHHHcCCCEEEECccccC
Q psy1056 407 PDMQVIGR--NGTAVYRVAEYASRRGVPVIADGGVQSV-G---------HVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 407 ~~~~~~g~--~~~~l~~~~~~~~~~~v~iia~GGi~~~-~---------di~kalalGA~~v~~g~~l~~ 464 (590)
.++.+.|+ ....+..+++.+. ..+++.+|||+-. . .+..|+..|||.+++||.+..
T Consensus 153 ~~~G~~g~V~~~~ei~~lr~~~~--~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 220 (246)
T 2yyu_A 153 KESGLDGVVCSANEAAFIKERCG--ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTR 220 (246)
T ss_dssp HHHTCCEEECCHHHHHHHHHHHC--TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHT
T ss_pred HHhCCCEEEeCHHHHHHHHHhcC--CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcC
Confidence 00212233 2222445555543 2458999999843 2 366778889999999998854
No 389
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.15 E-value=1 Score=45.85 Aligned_cols=69 Identities=23% Similarity=0.268 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC--C----chh-hHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCC-CCEEEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ--G----NSI-YQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNF-IYQIEM 398 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~--G----~~~-~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~G-vd~i~v 398 (590)
++..+.++.+.++|++.+++.... . ... ...+.++.+++.+ ++||++ |.+.++++|.++++.| +|.|-+
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 456778999999999999987421 0 011 2367788899888 789885 6677999999999999 999833
No 390
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=90.06 E-value=2.5 Score=40.36 Aligned_cols=186 Identities=12% Similarity=0.070 Sum_probs=91.8
Q ss_pred hhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEcCCCceEEEEeecccccccCCCC--CCcc-cCCceEEeEeecc
Q psy1056 251 EKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILNDKGELIALIARTDLKKSRDYPD--SSKD-ENNQLIVGAAIGT 327 (590)
Q Consensus 251 ~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~dll~~~~~~~--~~~d-~~~~l~v~a~i~~ 327 (590)
-++|...++++..-.-.++++++++..+.+-. +..+. +|+ .++....... .+++ ....++...-+..
T Consensus 6 ~~~m~~~~~lilAlD~~~~~~a~~~v~~~~~~-v~~~K-----vg~----~lf~~~G~~~v~~l~~~~g~~v~lD~Kl~D 75 (228)
T 3m47_A 6 VDVMDVMNRLILAMDLMNRDDALRVTGEVREY-IDTVK-----IGY----PLVLSEGMDIIAEFRKRFGCRIIADFKVAD 75 (228)
T ss_dssp TTSCCCGGGEEEECCCCSHHHHHHHHHTTTTT-CSEEE-----EEH----HHHHHHCTHHHHHHHHHHCCEEEEEEEECS
T ss_pred HHHhhcCCCeEEEeCCCCHHHHHHHHHHcCCc-ccEEE-----EcH----HHHHhcCHHHHHHHHhcCCCeEEEEEeecc
Confidence 35555312455555557788888888765421 11111 011 1111110000 0111 2233444554442
Q ss_pred chh-HHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccC-----------cHHHHHHHHCCCCE
Q psy1056 328 REA-DKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLF-----------GYQPRATLLNFIYQ 395 (590)
Q Consensus 328 ~~~-~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s-----------~~~a~~l~~~Gvd~ 395 (590)
-+. ....++.+.+.|+|.+.++..-|. ..+...++.+++.-+.+.++. ...+ ..-++.+.++|+++
T Consensus 76 ipnTv~~~~~~~~~~gad~vtvh~~~G~-~~l~~~~~~~~~~g~~v~vLt-~~s~~~~~~~~~~~~~~~a~~a~~~G~~G 153 (228)
T 3m47_A 76 IPETNEKICRATFKAGADAIIVHGFPGA-DSVRACLNVAEEMGREVFLLT-EMSHPGAEMFIQGAADEIARMGVDLGVKN 153 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESTTCH-HHHHHHHHHHHHHTCEEEEEC-CCCSGGGGTTHHHHHHHHHHHHHHTTCCE
T ss_pred cHhHHHHHHHHHHhCCCCEEEEeccCCH-HHHHHHHHHHHhcCCCeEEEE-eCCCccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 222 334677788999999999877663 223344455554432333321 1111 12345666799998
Q ss_pred EEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCH-HHHHHHHHcCCCEEEECccccC
Q psy1056 396 IEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSV-GHVMKALALGASTAMMGSLLAG 464 (590)
Q Consensus 396 i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~-~di~kalalGA~~v~~g~~l~~ 464 (590)
+ +|.... +..+..+++.+.. +.+ |.++||+-. .+. .++..|||.+++|+++..
T Consensus 154 v---V~~at~----------~~e~~~ir~~~~~-~~~-iv~PGI~~~g~~p-~~~~aGad~iVvGr~I~~ 207 (228)
T 3m47_A 154 Y---VGPSTR----------PERLSRLREIIGQ-DSF-LISPGVGAQGGDP-GETLRFADAIIVGRSIYL 207 (228)
T ss_dssp E---ECCSSC----------HHHHHHHHHHHCS-SSE-EEECC----------CGGGTCSEEEECHHHHT
T ss_pred E---EECCCC----------hHHHHHHHHhcCC-CCE-EEecCcCcCCCCH-hHHHcCCCEEEECHHHhC
Confidence 8 333211 2234455555432 244 467788643 356 888999999999998853
No 391
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=90.03 E-value=1.6 Score=41.55 Aligned_cols=119 Identities=9% Similarity=-0.031 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCc----hhhHHHHHHHHHHhCCCceEEecccc-Cc-HHHHHHHHCCCCEEEEccc-
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGN----SIYQIEMIKFIKKEYPDMQVIGGNVL-FG-YQPRATLLNFIYQIEMIKF- 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~----~~~~l~~i~~i~~~~~~vpvi~g~v~-s~-~~a~~l~~~Gvd~i~v~~~- 401 (590)
....+.++.+.+.|++.++++...|. .....+.++.+++.+ +.|+.+.-.. ++ +.++.+.++|+|+|-+...
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSSHHHHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecC
Confidence 35567888899999999998743221 112257788888776 4454433222 33 4688889999999943222
Q ss_pred -ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 402 -IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 402 -~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
.. . . ..++.+.+.+.++.++.+---.|+.+..+++..|+|+|.+.+.
T Consensus 102 ~~~-~---------~---~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~ 149 (230)
T 1rpx_A 102 SST-I---------H---LHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSV 149 (230)
T ss_dssp TTC-S---------C---HHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESS
T ss_pred ccc-h---------h---HHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEE
Confidence 11 1 1 1233444444466666543234777888888889999954443
No 392
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=90.02 E-value=4.3 Score=41.71 Aligned_cols=116 Identities=9% Similarity=-0.011 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHc-CCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-c-ccCcHHHHHHH----HCCCCEEEEccc
Q psy1056 330 ADKNRLKLLSQA-GVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-N-VLFGYQPRATL----LNFIYQIEMIKF 401 (590)
Q Consensus 330 ~~~e~~~~li~~-gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~-v~s~~~a~~l~----~~Gvd~i~v~~~ 401 (590)
...+.+...++. |...+-+.....+...-++.++.+++.+ |+.++.+. | .-+.++|.++. +.|+++| +
T Consensus 154 ~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----E 229 (372)
T 3tj4_A 154 DLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWF----E 229 (372)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEE----E
T ss_pred HHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEE----E
Confidence 445667778888 9999988775444555688899999988 57888864 2 22667665443 4566666 2
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
- . +... ... ..++.....++||++++-+.+..|+.+++..| +|.+++-
T Consensus 230 q--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 230 E--P---LWYD--DVT---SHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp S--C---SCTT--CHH---HHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred C--C---CCch--hHH---HHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeC
Confidence 1 1 1000 222 23333344579999999999999999999987 5777554
No 393
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=90.02 E-value=5.3 Score=40.92 Aligned_cols=117 Identities=9% Similarity=0.063 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHc-CCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-c-ccCcHHHHHH----HHCCCCEEEEcc
Q psy1056 329 EADKNRLKLLSQA-GVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-N-VLFGYQPRAT----LLNFIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~-gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~-v~s~~~a~~l----~~~Gvd~i~v~~ 400 (590)
+...+.++.+++. |...+-+.........-++.++.+++.+ |+.++.+. | .-+.++|.++ .+.|+++|
T Consensus 141 ~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i---- 216 (367)
T 3dg3_A 141 VKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFA---- 216 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCE----
T ss_pred HHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEE----
Confidence 4455677778888 9999888764322224577888899887 57788763 2 2266666544 44788877
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
+- . +... ... ..++.....++||++++.+.+..|+.+++..| +|.+++-
T Consensus 217 Eq--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 217 EE--L---CPAD--DVL---SRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp ES--C---SCTT--SHH---HHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEEC
T ss_pred EC--C---CCcc--cHH---HHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEee
Confidence 21 1 1100 222 23333334579999999999999999999988 6888664
No 394
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=90.00 E-value=0.75 Score=44.57 Aligned_cols=144 Identities=12% Similarity=0.086 Sum_probs=73.1
Q ss_pred ceEEeEeeccchhH-HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCce-EEeccccCcHHHHHHHHCCCC-
Q psy1056 318 QLIVGAAIGTREAD-KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQ-VIGGNVLFGYQPRATLLNFIY- 394 (590)
Q Consensus 318 ~l~v~a~i~~~~~~-~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vp-vi~g~v~s~~~a~~l~~~Gvd- 394 (590)
.+++..-+...+.. ...++.+.+.|+|.+.++..-|.. .+...++.+++.-...+ ++.=.+.|.-....+.+.|++
T Consensus 67 ~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~g~~-~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~ 145 (245)
T 1eix_A 67 DIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGAR-MMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTL 145 (245)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGGCHH-HHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCS
T ss_pred cEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccCCHH-HHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCC
Confidence 34444444422222 235677888999999998765522 12334444443310023 332233333334445444431
Q ss_pred -EEEEcccccccCCCcccccc--chhHHHHHHHHHhcCCCcEEecCCCCCHH----------HHHHHHHcCCCEEEECcc
Q psy1056 395 -QIEMIKFIKKEYPDMQVIGR--NGTAVYRVAEYASRRGVPVIADGGVQSVG----------HVMKALALGASTAMMGSL 461 (590)
Q Consensus 395 -~i~v~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~v~iia~GGi~~~~----------di~kalalGA~~v~~g~~ 461 (590)
..+.-...++...++.+.|. ....+..+++.+. +.+++.+|||+-.+ .+.+|+..|||.+++||.
T Consensus 146 ~~~d~Vl~ma~~~~~~G~~g~V~~~~ei~~lr~~~~--~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 223 (245)
T 1eix_A 146 SPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFG--QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRP 223 (245)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEECCGGGHHHHHHHHC--SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEeCHHHHHHHHHhcC--CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHH
Confidence 11100011000000112222 2222556666653 35899999998532 367788899999999998
Q ss_pred ccC
Q psy1056 462 LAG 464 (590)
Q Consensus 462 l~~ 464 (590)
+..
T Consensus 224 I~~ 226 (245)
T 1eix_A 224 VTQ 226 (245)
T ss_dssp HHT
T ss_pred HcC
Confidence 854
No 395
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=89.97 E-value=3.2 Score=42.89 Aligned_cols=118 Identities=18% Similarity=0.117 Sum_probs=80.0
Q ss_pred hhHHHHHHHHHHc-CCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-c-ccCcHHHH----HHHHCCCCEEEEcc
Q psy1056 329 EADKNRLKLLSQA-GVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-N-VLFGYQPR----ATLLNFIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~-gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~-v~s~~~a~----~l~~~Gvd~i~v~~ 400 (590)
+...+.++.+++. |...+-+.....+...-++.++.+++.+ |++++++. | .-+.++|. .|.+.|+++|
T Consensus 169 e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i---- 244 (383)
T 3toy_A 169 RDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWI---- 244 (383)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEE----
T ss_pred HHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEE----
Confidence 4455677788888 9999988775544555678899999887 67888863 2 22666654 4555788888
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+- . +..+ ... ..++..+..++||.++.-+.+..|+.+++..| +|.+++-.
T Consensus 245 Ee--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 245 EE--P---VPQE--NLS---GHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp EC--C---SCTT--CHH---HHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred EC--C---CCcc--hHH---HHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 21 1 1100 222 23333344579999999999999999999988 57775553
No 396
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=89.82 E-value=0.6 Score=44.64 Aligned_cols=65 Identities=17% Similarity=0.166 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh--hHHHHHHHHHHhC-CCceEE-eccccCcHHHHHHHHCCCCEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI--YQIEMIKFIKKEY-PDMQVI-GGNVLFGYQPRATLLNFIYQI 396 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~--~~l~~i~~i~~~~-~~vpvi-~g~v~s~~~a~~l~~~Gvd~i 396 (590)
...+.++.+.++|+|++.+++ |... ...+.++.+++.. +++||+ .|++.|.++|.+++++|+|.|
T Consensus 133 ~~~~~a~~a~eaGad~I~tst--g~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTST--GFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCC--SCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEEEECC--CCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 355678888899999995544 2211 1345666666654 268888 688889999999999999976
No 397
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=89.79 E-value=5.7 Score=40.33 Aligned_cols=81 Identities=14% Similarity=0.028 Sum_probs=57.3
Q ss_pred HHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCC
Q psy1056 360 EMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGG 438 (590)
Q Consensus 360 ~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GG 438 (590)
..+...++.. +++++. ++.+.+.+..|.+.|+|++.| |-+.+. +..++..+ +.+.|||.+-|
T Consensus 81 ~~L~~~~~~~-Gi~~~s-t~fD~~svd~l~~~~v~~~KI~S~~~~N--------------~pLL~~va-~~gKPviLstG 143 (350)
T 3g8r_A 81 QKLVAEMKAN-GFKAIC-TPFDEESVDLIEAHGIEIIKIASCSFTD--------------WPLLERIA-RSDKPVVASTA 143 (350)
T ss_dssp HHHHHHHHHT-TCEEEE-EECSHHHHHHHHHTTCCEEEECSSSTTC--------------HHHHHHHH-TSCSCEEEECT
T ss_pred HHHHHHHHHc-CCcEEe-ccCCHHHHHHHHHcCCCEEEECcccccC--------------HHHHHHHH-hhCCcEEEECC
Confidence 3444455555 677655 899999999999999999977 322221 22344333 56899999999
Q ss_pred CCCHHHHHHHHH----cCCCEEE
Q psy1056 439 VQSVGHVMKALA----LGASTAM 457 (590)
Q Consensus 439 i~~~~di~kala----lGA~~v~ 457 (590)
+.|-.++..|.. .|.+.+.
T Consensus 144 mstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 144 GARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp TCCHHHHHHHHHHHHTTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE
Confidence 999999988765 3666554
No 398
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=89.71 E-value=0.85 Score=43.80 Aligned_cols=114 Identities=12% Similarity=-0.014 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch----hhHHHHHHHHHHhCCCceEEecc-ccCcH-HHHHHHHCCCCEEEEcccc-
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS----IYQIEMIKFIKKEYPDMQVIGGN-VLFGY-QPRATLLNFIYQIEMIKFI- 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~----~~~l~~i~~i~~~~~~vpvi~g~-v~s~~-~a~~l~~~Gvd~i~v~~~~- 402 (590)
.+.+.++.+ +.|++.+++|.-.|+. ..-...++.+++.. +.|+-+.= +.+++ -.+.+.++|||+|-+-.+.
T Consensus 14 ~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~-~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~ 91 (231)
T 3ctl_A 14 KFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA-TKPLDCHLMVTRPQDYIAQLARAGADFITLHPETI 91 (231)
T ss_dssp GHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC-CSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGC
T ss_pred hHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccC
Confidence 455677777 9999999999766651 22256788888764 44443311 11233 3688999999999654333
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEE
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMM 458 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~ 458 (590)
+.. +..+.+.+++.++.+..+=--.||.+..+.+.-++|.|.+
T Consensus 92 ~~~-------------~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~Vlv 134 (231)
T 3ctl_A 92 NGQ-------------AFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITV 134 (231)
T ss_dssp TTT-------------HHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEE
T ss_pred Ccc-------------HHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEE
Confidence 322 2334444445565444433555888888888889999954
No 399
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=89.70 E-value=1.5 Score=41.78 Aligned_cols=121 Identities=18% Similarity=0.155 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
...+.++.+.+.. +-+.|-.+-- .+| +..++.+.++ ++++-+=-+.|.++|..+.++|+++| |+..+| .
T Consensus 74 ~~i~eA~~l~~~~-~nv~IKIP~T-~eG-l~A~~~L~~~--GI~vN~TliFS~~Qa~~aa~AGa~~i--SpFVgR----i 142 (223)
T 1wx0_A 74 AMVAEGRRLAAIH-PNIVVKLPTT-EEG-LKACKRLSAE--GIKVNMTLIFSANQALLAARAGASYV--SPFLGR----V 142 (223)
T ss_dssp HHHHHHHHHHHHC-TTEEEEEESS-HHH-HHHHHHHHHT--TCCEEEEEECSHHHHHHHHHTTCSEE--EEBHHH----H
T ss_pred HHHHHHHHHHhhC-CCEEEEeCCC-HHH-HHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHCCCeEE--Eeccch----H
Confidence 3445566666655 3344433211 122 6677777776 67776656779999999999999987 444444 3
Q ss_pred ccccc-chhHHHHHHHHHhcCC--CcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 410 QVIGR-NGTAVYRVAEYASRRG--VPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 410 ~~~g~-~~~~l~~~~~~~~~~~--v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
.+||. ....+.++..+.+.++ ..+++ .++|++.++..|..+|+|.+-+...+
T Consensus 143 dd~g~~G~~~v~~i~~~~~~~~~~t~vl~-AS~r~~~~v~~~~l~G~d~~Tip~~~ 197 (223)
T 1wx0_A 143 DDISWDGGELLREIVEMIQVQDLPVKVIA-ASIRHPRHVTEAALLGADIATMPHAV 197 (223)
T ss_dssp HHTTSCHHHHHHHHHHHHHHTTCSCEEEE-BCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred hhcCCCHHHHHHHHHHHHHHcCCCeEEee-cccCCHHHHHHHHHhCCCEEECCHHH
Confidence 55776 5666677777666554 33444 48999999999999999999777544
No 400
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=89.70 E-value=0.73 Score=44.02 Aligned_cols=122 Identities=11% Similarity=0.023 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE--ec----cccC---cHHHHHHHHCCCCEEEEc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI--GG----NVLF---GYQPRATLLNFIYQIEMI 399 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi--~g----~v~s---~~~a~~l~~~Gvd~i~v~ 399 (590)
.+..+..+...+.++..++++.. .+...++.+.++.+. ++ .-.+ ..+++. ++.|||.||+-
T Consensus 17 ~~i~~l~~~A~~~~~~aVcv~p~---------~v~~a~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdEID~V 86 (226)
T 1vcv_A 17 DEAVAGARKAEELGVAAYCVNPI---------YAPVVRPLLRKVKLCVVADFPFGALPTASRIALVSR-LAEVADEIDVV 86 (226)
T ss_dssp HHHHHHHHHHHHHTCSEEEECGG---------GHHHHGGGCSSSEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECHH---------HHHHHHHHhCCCeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCEEEEe
Confidence 34455677777889999998543 222333333233332 11 1111 256778 99999999984
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHH----HHHcCCCEEEECccc
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMK----ALALGASTAMMGSLL 462 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~k----alalGA~~v~~g~~l 462 (590)
+..+.-++ ..|.....-+..+.+.|....+++|..-+..+..++.+ |..+|||+|=-.+-|
T Consensus 87 inig~~~~--g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf 151 (226)
T 1vcv_A 87 APIGLVKS--RRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGF 151 (226)
T ss_dssp CCHHHHHT--TCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred cchhhhcC--CCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 43332100 11222333455666666555689999999999888877 456799999544433
No 401
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=89.61 E-value=6.1 Score=40.75 Aligned_cols=117 Identities=17% Similarity=0.168 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEec-ccc-CcHHH----HHHHHCCCCEEEEccccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-NVL-FGYQP----RATLLNFIYQIEMIKFIK 403 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v~-s~~~a----~~l~~~Gvd~i~v~~~~~ 403 (590)
...+.++..++.|...+-+.........-++.++.+++.+|++++++. |.. +.++| +.|.+.|+++| +-
T Consensus 151 ~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~i----Eq- 225 (385)
T 3i6e_A 151 ADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFI----EQ- 225 (385)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCE----EC-
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE----EC-
Confidence 344566777788999998877554445557888999988888888864 222 55555 45556888888 21
Q ss_pred ccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 404 KEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 404 ~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
. + ....+...++.....++||.++.-+.+..|+.+++..| +|.+++-.
T Consensus 226 -P---~-----~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 274 (385)
T 3i6e_A 226 -P---V-----RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKI 274 (385)
T ss_dssp -C---S-----CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred -C---C-----CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecc
Confidence 1 1 11112334444445679999999999999999999887 57777653
No 402
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=89.58 E-value=7.2 Score=38.28 Aligned_cols=118 Identities=18% Similarity=0.129 Sum_probs=70.9
Q ss_pred HHHHHHHHHHcCCcEEEEec--CCC--chhhHHHHHHHHHHhCCCceEEe-----cccc----CcHHH----HHHHHCC-
Q psy1056 331 DKNRLKLLSQAGVDVVILDS--SQG--NSIYQIEMIKFIKKEYPDMQVIG-----GNVL----FGYQP----RATLLNF- 392 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~--~~G--~~~~~l~~i~~i~~~~~~vpvi~-----g~v~----s~~~a----~~l~~~G- 392 (590)
....++.+...|+|++.+-. -.. ....+.+.++.+++..++.|+|+ .+.+ +.+.- +.+++.|
T Consensus 54 ~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~ 133 (276)
T 3o1n_A 54 VKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGL 133 (276)
T ss_dssp HHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCC
Confidence 33445555567999998743 222 22457788889998877789985 2222 22222 3445678
Q ss_pred CCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC----CCCCHHHHH----HHHHcCCCEE-EECc
Q psy1056 393 IYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG----GVQSVGHVM----KALALGASTA-MMGS 460 (590)
Q Consensus 393 vd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G----Gi~~~~di~----kalalGA~~v-~~g~ 460 (590)
+|+|||....... .+.++.+.+.+.+..||+|- +-.+..++. ++..+|||.| ++..
T Consensus 134 ~dyIDvEl~~~~~------------~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~ 198 (276)
T 3o1n_A 134 VDMIDLELFTGDD------------EVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVM 198 (276)
T ss_dssp CSEEEEEGGGCHH------------HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CCEEEEECcCCHH------------HHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 9999885432211 23344444445578899963 433434443 5778999999 4443
No 403
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.49 E-value=2.1 Score=42.45 Aligned_cols=92 Identities=15% Similarity=-0.034 Sum_probs=63.2
Q ss_pred HHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---ccccccCCCcccccc-chhHH-HHHHHHHhcCCCcEEec
Q psy1056 362 IKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KFIKKEYPDMQVIGR-NGTAV-YRVAEYASRRGVPVIAD 436 (590)
Q Consensus 362 i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~~~~~~~~~~~~g~-~~~~l-~~~~~~~~~~~v~iia~ 436 (590)
+..+.+. +-|+.+-++-+.-.|+.+.++|+|+|.++ +..... ..+.+. +.+.+ ..++..+...++|||+|
T Consensus 7 lr~l~~~--~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G---~pD~~~vt~~em~~~~~~I~~~~~~PviaD 81 (290)
T 2hjp_A 7 LRAALDS--GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYA---VPDANILSMSTHLEMMRAIASTVSIPLIAD 81 (290)
T ss_dssp HHHHHHH--CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTT---SCTTTCSCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCC---CCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 4444444 45777778889999999999999999883 222222 445555 65554 34566666667999996
Q ss_pred C--CCCCHHHHHH----HHHcCCCEEEE
Q psy1056 437 G--GVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 437 G--Gi~~~~di~k----alalGA~~v~~ 458 (590)
+ |..++.++++ .+..||.+|-+
T Consensus 82 ~d~Gyg~~~~~~~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 82 IDTGFGNAVNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp CTTTTSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 5 7667776654 45679999954
No 404
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=89.43 E-value=5.3 Score=40.69 Aligned_cols=119 Identities=11% Similarity=0.051 Sum_probs=78.9
Q ss_pred chhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-c-ccCcHHHHHH----HHCCCCEEEEcc
Q psy1056 328 READKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-N-VLFGYQPRAT----LLNFIYQIEMIK 400 (590)
Q Consensus 328 ~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~-v~s~~~a~~l----~~~Gvd~i~v~~ 400 (590)
.+...+.++.+++.|...+-+..... ...-++.++.+++.+ |++++.+. | .-+.++|.++ .+.|+++|
T Consensus 140 ~~~~~~~a~~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~i---- 214 (354)
T 3jva_A 140 PNVMAQKAVEKVKLGFDTLKIKVGTG-IEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELV---- 214 (354)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEE----
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE----
Confidence 34456677788889999988876432 344578889999887 67888863 2 2266666543 34677777
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECcc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSL 461 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~ 461 (590)
+- . +... ... ..++.....++||++++.+.+..|+.+++..| +|.|++-..
T Consensus 215 Eq--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 215 EQ--P---VKRR--DLE---GLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp EC--C---SCTT--CHH---HHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EC--C---CChh--hHH---HHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECch
Confidence 21 1 1100 222 23333334579999999999999999999886 688877643
No 405
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=89.31 E-value=6.9 Score=39.59 Aligned_cols=115 Identities=18% Similarity=0.102 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEec-cc-cCcHHH----HHHHHCCCC--EEEEcc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-NV-LFGYQP----RATLLNFIY--QIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~v-~s~~~a----~~l~~~Gvd--~i~v~~ 400 (590)
+...+.+..+.+.|.+.+-+...+ +...-++.++.+++..|++++.+. |. -+.++| +.|.+.|++ +|
T Consensus 141 ~~~~~~a~~~~~~Gf~~iKik~g~-~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~i---- 215 (345)
T 2zad_A 141 ENRVKEAKKIFEEGFRVIKIKVGE-NLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVY---- 215 (345)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEE----
T ss_pred HHHHHHHHHHHHcCcCEEEEeecC-CHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeee----
Confidence 344566777888999999887654 334456778888887557888763 21 255555 456668999 88
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEE
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMM 458 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~ 458 (590)
+-- +... ....+..++ +..++||++++.+.+..++.+.+..| +|.+++
T Consensus 216 E~P-----~~~~--~~~~~~~l~---~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 216 EQP-----VRRE--DIEGLKFVR---FHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp ECC-----SCTT--CHHHHHHHH---HHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred eCC-----CCcc--cHHHHHHHH---HhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 211 1100 222333333 34579999999999999999999988 678855
No 406
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=89.23 E-value=11 Score=36.45 Aligned_cols=120 Identities=15% Similarity=0.096 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHcCCcEEEEec--CCC--chhhHHHHHHHHHHhCCCceEEe-----cccc----CcHH----HHHHHHC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDS--SQG--NSIYQIEMIKFIKKEYPDMQVIG-----GNVL----FGYQ----PRATLLN 391 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~--~~G--~~~~~l~~i~~i~~~~~~vpvi~-----g~v~----s~~~----a~~l~~~ 391 (590)
++..+.++.+...|+|++.+-. -+. +...+.+.+..++...++.|+++ .+.+ +.+. .+.+.+.
T Consensus 32 ~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~ 111 (258)
T 4h3d_A 32 KDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNT 111 (258)
T ss_dssp HHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhc
Confidence 3445566677778999998754 222 33556788888998877789984 2222 2221 2345556
Q ss_pred C-CCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecC----CCCCHHH----HHHHHHcCCCEE-EECc
Q psy1056 392 F-IYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADG----GVQSVGH----VMKALALGASTA-MMGS 460 (590)
Q Consensus 392 G-vd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~G----Gi~~~~d----i~kalalGA~~v-~~g~ 460 (590)
| +|+|||....... .+.++.+.+...++.||+|- +-.+-.+ +.++.++|||.+ ++..
T Consensus 112 ~~~d~iDvEl~~~~~------------~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~ 178 (258)
T 4h3d_A 112 GLVDLIDVELFMGDE------------VIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVM 178 (258)
T ss_dssp TCCSEEEEEGGGCHH------------HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CCchhhHHhhhccHH------------HHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEc
Confidence 6 8999885433222 12334444445568888865 4333344 446778899998 4443
No 407
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.13 E-value=5.6 Score=41.21 Aligned_cols=119 Identities=10% Similarity=0.054 Sum_probs=79.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecC-CC-ch-hhHHHHHHHHHHhC-CCceEEec--ccc--CcHHH----HHHHHCCCCEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSS-QG-NS-IYQIEMIKFIKKEY-PDMQVIGG--NVL--FGYQP----RATLLNFIYQI 396 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~-~G-~~-~~~l~~i~~i~~~~-~~vpvi~g--~v~--s~~~a----~~l~~~Gvd~i 396 (590)
+...+.+..+.+.|.+.+-+..+ -| +. ...++.++.+++.+ +++++.+. ..- +.+++ +.|.+.|+++|
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~i 226 (401)
T 2hzg_A 147 QETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWL 226 (401)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 34456777788899999988721 12 33 45678899999877 57888864 222 44444 55667899988
Q ss_pred EEcccccccCCCccccccchhHHHHHHHHHh-cCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECcc
Q psy1056 397 EMIKFIKKEYPDMQVIGRNGTAVYRVAEYAS-RRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSL 461 (590)
Q Consensus 397 ~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~-~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~ 461 (590)
+-- + .. ..+...++..+ ..++||++++.+.+..++.+++..| +|.+++-..
T Consensus 227 ----EqP-----~---~~--~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 227 ----EEP-----F---DA--GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp ----ECC-----S---CT--TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred ----ECC-----C---Cc--cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 211 1 01 11223344444 4579999999999999999999887 799988543
No 408
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.09 E-value=2.7 Score=41.89 Aligned_cols=69 Identities=14% Similarity=0.041 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-C-CceEEecccc-----CcHHHHHHHHCCCCEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-P-DMQVIGGNVL-----FGYQPRATLLNFIYQIE 397 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~-~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~ 397 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. . .+||++|-.. +.+-++.+.++|+|++-
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavl 108 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGIL 108 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44567888999999999987766643 22245555555544 3 4899986554 34556677889999995
Q ss_pred E
Q psy1056 398 M 398 (590)
Q Consensus 398 v 398 (590)
+
T Consensus 109 v 109 (301)
T 3m5v_A 109 S 109 (301)
T ss_dssp E
T ss_pred E
Confidence 5
No 409
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=89.00 E-value=1.5 Score=44.42 Aligned_cols=92 Identities=25% Similarity=0.222 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
...+.+..+.++|++++-+..+.. ...+.+..+++.. ++|+++.--.++.-|..++++|+|.+.+-+.+-
T Consensus 47 atv~Qi~~l~~aG~diVRvavp~~---~~a~al~~I~~~~-~vPlvaDiHf~~~lal~a~e~G~dklRINPGNi------ 116 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVPHK---EDVEALEEIVKKS-PMPVIADIHFAPSYAFLSMEKGVHGIRINPGNI------ 116 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCSH---HHHHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHTTCSEEEECHHHH------
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCh---HHHHHHHHHHhcC-CCCEEEeCCCCHHHHHHHHHhCCCeEEECCccc------
Confidence 445678889999999998876542 2367889999988 799987444799999999999999986532221
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEe
Q psy1056 410 QVIGRNGTAVYRVAEYASRRGVPVIA 435 (590)
Q Consensus 410 ~~~g~~~~~l~~~~~~~~~~~v~iia 435 (590)
| ....+.++.+.+++.++|+-.
T Consensus 117 ---g-~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 117 ---G-KEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp ---S-CHHHHHHHHHHHHHHTCEEEE
T ss_pred ---C-chhHHHHHHHHHHHcCCCEEE
Confidence 1 122345566667777888766
No 410
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=88.99 E-value=2 Score=38.64 Aligned_cols=69 Identities=16% Similarity=0.066 Sum_probs=53.7
Q ss_pred chhHHHHHHHHHHcCCcEEEEecCCCc-hhhHHHHHHHHHHhC-CCceEEeccccCcHHHHHHHHCCCCEE
Q psy1056 328 READKNRLKLLSQAGVDVVILDSSQGN-SIYQIEMIKFIKKEY-PDMQVIGGNVLFGYQPRATLLNFIYQI 396 (590)
Q Consensus 328 ~~~~~e~~~~li~~gad~i~V~~~~G~-~~~~l~~i~~i~~~~-~~vpvi~g~v~s~~~a~~l~~~Gvd~i 396 (590)
..+..+.++.+.+.+++++.+....+. ...+.+.++.+++.. +++++++|+....++...+.+.|+|++
T Consensus 55 ~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v 125 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREI 125 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEE
Confidence 345567788888999999998776543 355678888888874 479999988877777777889999986
No 411
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=88.86 E-value=3.2 Score=41.38 Aligned_cols=112 Identities=13% Similarity=0.179 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 113 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVML 113 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 34567888999999999988766643 12244555555443 36899986554 345566778899999955
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEe-c----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIA-D----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia-~----GGi~~~~di~kala 450 (590)
.+.-.+ .+...+. -....+...++|||. . .|+.-+.+..+.|+
T Consensus 114 ~~P~y~~---------~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 114 VAPYYNK---------PSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp ECCCSSC---------CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred cCCCCCC---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 221111 1222222 233444445688776 1 35554555555565
No 412
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=88.85 E-value=3.4 Score=43.17 Aligned_cols=118 Identities=10% Similarity=-0.019 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCC------------chhhHHHHHHHHHHhC-CCceEEecccc--CcHHHH----HHH
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQG------------NSIYQIEMIKFIKKEY-PDMQVIGGNVL--FGYQPR----ATL 389 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G------------~~~~~l~~i~~i~~~~-~~vpvi~g~v~--s~~~a~----~l~ 389 (590)
+...+.++.+++.|...+-+..... +...-++.++.+|+.+ +++++++.--. +.++|. .|.
T Consensus 146 e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~ 225 (412)
T 4e4u_A 146 DLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLE 225 (412)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhh
Confidence 4455677788889999998865321 1234577888899887 57888864222 666654 455
Q ss_pred HCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 390 LNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 390 ~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+.|+++| +- . +. . ..+...++..+..++||++++.+.+..++.+++..| +|.+++-.
T Consensus 226 ~~~i~~i----Ee--P---~~---~--~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 226 KYDPLWF----EE--P---VP---P--GQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp GGCCSEE----EC--C---SC---S--SCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred hcCCcEE----EC--C---CC---h--hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 6888888 21 1 11 1 112233444445679999999999999999999988 67776653
No 413
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=88.78 E-value=3.1 Score=41.29 Aligned_cols=69 Identities=17% Similarity=0.087 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh-----hHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI-----YQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~-----~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|... .-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALV 101 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345678888999999999877666431 2244555555443 36899986554 345566778899999955
No 414
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=88.76 E-value=1 Score=44.42 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=48.8
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.+....++|+|++.+++ .....+....+.++..+|++|+.+-+..+.+.+..+.++|||+|-+
T Consensus 193 ee~~~A~~aGaD~I~ld~--~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCDN--LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISV 256 (273)
T ss_dssp HHHHHHHHHTCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEE
Confidence 445556678999999876 3344555566667777888998866656999999999999999955
No 415
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=88.72 E-value=1.4 Score=41.78 Aligned_cols=121 Identities=14% Similarity=0.156 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
...+.++.+.+..-+ +.|-.+- ..+| +..++.+.++ ++++-+=-+.|.++|..+.++|++++ |+..+| .
T Consensus 67 ~mi~eA~~l~~~~~n-v~IKIP~-T~eG-l~A~~~L~~~--GI~vn~TliFS~~QA~~aa~AGa~~i--SpfvgR----i 135 (220)
T 1l6w_A 67 GMVNDALKLRSIIAD-IVVKVPV-TAEG-LAAIKMLKAE--GIPTLGTAVYGAAQGLLSALAGAEYV--APYVNR----I 135 (220)
T ss_dssp HHHHHHHHHHHHSTT-CEEEEEC-SHHH-HHHHHHHHHH--TCCEEEEEECSHHHHHHHHHHTCSEE--EEBHHH----H
T ss_pred HHHHHHHHHHHhCCC-EEEEeCC-CHHH-HHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHCCCeEE--Eeccch----h
Confidence 334556666665422 3333221 1122 6677778777 67776656779999999999999988 444444 3
Q ss_pred ccccc-chhHHHHHHHHHhcCC--CcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 410 QVIGR-NGTAVYRVAEYASRRG--VPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 410 ~~~g~-~~~~l~~~~~~~~~~~--v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
.+||. ....+.++..+.+.++ ..+++. ++|++.++..|..+|+|.+-+...+
T Consensus 136 dd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S~r~~~~v~~~~l~G~d~~Tip~~~ 190 (220)
T 1l6w_A 136 DAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-SFKTPRQALDCLLAGCESITLPLDV 190 (220)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-CCSSHHHHHHHHHTTCSEEEECHHH
T ss_pred hcccccHHHHHHHHHHHHHhcCCCeEEeec-ccCCHHHHHHHHHhCCCeEECCHHH
Confidence 55666 5556666666655443 445554 7999999999999999999777544
No 416
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=88.63 E-value=28 Score=37.03 Aligned_cols=265 Identities=17% Similarity=0.131 Sum_probs=0.0
Q ss_pred chHHHHHHHHHcCCcEEEEcCCCCchHHHHHHHHHhhhcCCCcccccccccchHHHHHHHHHhcccccc----ccccccC
Q psy1056 137 ADKYRLKLLSQAGVDVVILDSSQGNSIYQIEMIKYIKKEYPDMQVIGGNVVTTDQAKNLIDAGVDGLRV----GSHGCHG 212 (590)
Q Consensus 137 d~~~~~~~l~~~~~dvv~~~~~~~~~~~~~~~v~~vk~~~~~~~im~~~~~~~~~~~~a~~~m~~~~~v----~~~~~~~ 212 (590)
++.+.+..|+++|.|+.-++-+||..+...+.++.+++ -..+......+. | .+-+
T Consensus 33 ~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~-------------------~~~~~g~~vaIl~Dl~G--PkIR 91 (499)
T 3hqn_D 33 QSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQ-------------------AAAELGVNIAIALDTKG--PEIR 91 (499)
T ss_dssp CSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHH-------------------HHHHHTCCCEEEEECCC--CCCB
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHH-------------------HHHHhCCcEEEEEeCCC--CEEe
Q ss_pred ceee----EEeeCCCCCCeEEEEEecchhhccccccccccchhhccccCCCeeEEcCCCCHHHHHHHHHhcCCCcceEEc
Q psy1056 213 FCGF----PVTENGKLGEKLLGIVTSRDVDFLENSANMDLKIEKVMTNVNEIISAQAGISLEEANVILEKSKKGKLPILN 288 (590)
Q Consensus 213 ~~~~----pVvd~~~~~~~lvGivt~~Dl~~~~~~~~~~~~V~~im~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVvd 288 (590)
.+.+ +++.. |..+=+.+..+....... +.+.++... +...-+.+....+|
T Consensus 92 ~g~~~~~~~vL~~----G~~~~lt~~~~~~~~g~~---------------~~i~v~y~~-------l~~~v~~G~~ilid 145 (499)
T 3hqn_D 92 TGQFVGGDAVMER----GATCYVTTDPAFADKGTK---------------DKFYIDYQN-------LSKVVRPGNYIYID 145 (499)
T ss_dssp BCCBGGGEEEECT----TCEEEEECCGGGTTCBCS---------------SEEEBSCTT-------HHHHCCTTCEEEET
T ss_pred eeccCCCCeEEcC----CCEEEEEecCcccCCCCC---------------CEEecchHH-------HHhhcCCCCEEEEe
Q ss_pred CCCceEEEEeecc----cccccCCCCCCcccCCceEEeEeeccc---hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHH
Q psy1056 289 DKGELIALIARTD----LKKSRDYPDSSKDENNQLIVGAAIGTR---EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEM 361 (590)
Q Consensus 289 ~~g~l~Giit~~d----ll~~~~~~~~~~d~~~~l~v~a~i~~~---~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~ 361 (590)
||.+.-.|...+ +.-.....-.+....+--+-+..+... +...+-+...++.|+|++.+...+. ...+.+.
T Consensus 146 -DG~i~l~V~~~~~~~~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~-a~dv~~~ 223 (499)
T 3hqn_D 146 -DGILILQVQSHEDEQTLECTVTNSHTISDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRS-AEQVGDV 223 (499)
T ss_dssp -TTTEEEEEEEEEETTEEEEEECSCEEEETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCS-HHHHHHH
T ss_pred -CCEEEEEEEEEcCCCeEEEEEEeCcEeeCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCC-HHHHHHH
Q ss_pred HHHHHHhCCCceEEec--cccCcHHHHHHHHCCCCEEEE-----cccccccCCCccccccchhHHHHHHHHHhcCCCcEE
Q psy1056 362 IKFIKKEYPDMQVIGG--NVLFGYQPRATLLNFIYQIEM-----IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVI 434 (590)
Q Consensus 362 i~~i~~~~~~vpvi~g--~v~s~~~a~~l~~~Gvd~i~v-----~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~ii 434 (590)
-+.+.+.-.+++++++ +....+.....+++ +|+|-| +++...+ . -+..-..+...|...+.|+|
T Consensus 224 r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~-sDgImVaRGDLgvEi~~e---~-----vp~~Qk~iI~~c~~agkpVi 294 (499)
T 3hqn_D 224 RKALGPKGRDIMIICKIENHQGVQNIDSIIEE-SDGIMVARGDLGVEIPAE---K-----VVVAQKILISKCNVAGKPVI 294 (499)
T ss_dssp HHHHCGGGTTSEEEEEECSHHHHHTHHHHHHH-SSEEEEEHHHHHHHSCHH---H-----HHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh-CCcEEEccccccCcCCHH---H-----HHHHHHHHHHHHHHcCCCeE
Q ss_pred ecCCCCCHH------------HHHHHHHcCCCEEEEC
Q psy1056 435 ADGGVQSVG------------HVMKALALGASTAMMG 459 (590)
Q Consensus 435 a~GGi~~~~------------di~kalalGA~~v~~g 459 (590)
...-+..+. |++.|+.-|||+||+.
T Consensus 295 ~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLS 331 (499)
T 3hqn_D 295 CATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLS 331 (499)
T ss_dssp EESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred EeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEe
No 417
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=88.61 E-value=0.24 Score=48.64 Aligned_cols=67 Identities=16% Similarity=0.066 Sum_probs=47.4
Q ss_pred cHHHHHHHHCCCCEEEE-cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECc
Q psy1056 382 GYQPRATLLNFIYQIEM-IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGS 460 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v-~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~ 460 (590)
.+.|+.+.+.|++.+.+ .+.. . .... +.+.++...+|+...|||++- |+.+.+ +||+-|.+|+
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~--~---------n~~~---i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs 104 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP--N---------NDDA---AREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTS 104 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS--S---------CHHH---HHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECG
T ss_pred HHHHHHHHHcCCCEEEEEeCCC--C---------CHHH---HHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECc
Confidence 35678888899997743 1110 1 2222 333444456999999999986 999999 9999999998
Q ss_pred cccC
Q psy1056 461 LLAG 464 (590)
Q Consensus 461 ~l~~ 464 (590)
.+..
T Consensus 105 ~a~~ 108 (260)
T 2agk_A 105 WLFT 108 (260)
T ss_dssp GGBC
T ss_pred HHHh
Confidence 8654
No 418
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=88.56 E-value=3.5 Score=41.12 Aligned_cols=69 Identities=19% Similarity=0.225 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv 117 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLV 117 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 34567888999999999987766543 22244555555443 36899986554 345566778899999955
No 419
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=88.41 E-value=4.8 Score=41.96 Aligned_cols=115 Identities=7% Similarity=-0.007 Sum_probs=76.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecC-----------CCc--------------hhhHHHHHHHHHHhC-CCceEEecc--cc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSS-----------QGN--------------SIYQIEMIKFIKKEY-PDMQVIGGN--VL 380 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~-----------~G~--------------~~~~l~~i~~i~~~~-~~vpvi~g~--v~ 380 (590)
+...+.++..++.|...+-+... .|. ....++.++.+|+.+ |+.++++.- .-
T Consensus 145 e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~~~ 224 (409)
T 3go2_A 145 DGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNFNA 224 (409)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 34556777888899999887650 010 123467889999887 678888642 22
Q ss_pred CcHHHHH----HHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCE
Q psy1056 381 FGYQPRA----TLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-AST 455 (590)
Q Consensus 381 s~~~a~~----l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~ 455 (590)
+.++|.+ |.+.|+++|.. . .. ... ..++..+..++||++++.+.+..++.+++..| +|.
T Consensus 225 ~~~~A~~~~~~L~~~~i~~iE~------P---~~----d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 288 (409)
T 3go2_A 225 KPEGYLKILRELADFDLFWVEI------D---SY----SPQ---GLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDV 288 (409)
T ss_dssp CHHHHHHHHHHTTTSCCSEEEC------C---CS----CHH---HHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSE
T ss_pred CHHHHHHHHHHHhhcCCeEEEe------C---cC----CHH---HHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCE
Confidence 6666544 44578888831 1 10 222 23333344579999999999999999999988 688
Q ss_pred EEEC
Q psy1056 456 AMMG 459 (590)
Q Consensus 456 v~~g 459 (590)
+++-
T Consensus 289 v~~k 292 (409)
T 3go2_A 289 AIVD 292 (409)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 7664
No 420
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=88.41 E-value=1.5 Score=44.58 Aligned_cols=65 Identities=18% Similarity=0.127 Sum_probs=51.4
Q ss_pred EeccccccccCCCCCCC--CccCCcccccccccccCCceeeCCCCCCchHHHHHHHHHcCCeeEecCCCc
Q psy1056 69 VTSRDVDFLENSANMDL--KIEKDLSSPLTKKITLAAPLVSSPMDTVTESDMAIAMALCGGIGAAIGTRE 136 (590)
Q Consensus 69 vT~~Did~l~~~~~~~~--~~~~~~~~~l~~~~~~~~piv~~~~~tv~~~~~~~~~~~~G~~gi~~~~~~ 136 (590)
.+++ ++.+.|+.... .+++++++.+. ...++.|++.++|..++...++.+++..|++++++...+
T Consensus 14 ~~fd--~v~l~p~~~~~~~~~~vdl~t~i~-g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~ 80 (336)
T 1ypf_A 14 FDYE--DIQLIPAKCIVNSRSECDTTVTLG-KHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQP 80 (336)
T ss_dssp CCGG--GEEECCCCCCCSSGGGCBCCEEET-TEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSG
T ss_pred CCcc--eEEEecccCCCCCcccCcceEEEC-CEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCC
Confidence 4567 77778887655 45788888887 477889999999999999888877889999998776543
No 421
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.37 E-value=3.2 Score=41.14 Aligned_cols=69 Identities=14% Similarity=0.022 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh-----hHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI-----YQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~-----~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|... .-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 101 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLS 101 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345678889999999999877666432 2244555555433 36899986554 345567778899999955
No 422
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.32 E-value=3.8 Score=40.67 Aligned_cols=168 Identities=9% Similarity=0.005 Sum_probs=99.0
Q ss_pred HHHHHHHHHhcCCCcceEEcCCCceEEEEeec---ccccccCCCCCCcccCCceEEeEeec--cchhHHHHHHHHHHcCC
Q psy1056 269 LEEANVILEKSKKGKLPILNDKGELIALIART---DLKKSRDYPDSSKDENNQLIVGAAIG--TREADKNRLKLLSQAGV 343 (590)
Q Consensus 269 l~ea~~~m~~~~~~~lpVvd~~g~l~Giit~~---dll~~~~~~~~~~d~~~~l~v~a~i~--~~~~~~e~~~~li~~ga 343 (590)
+.+..+.+.+++++.+.+....|+..- +|.. .+++.... ...++..+.+.++ ...+..+.++...+.|+
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~-----~~~gr~pviaGvg~~~t~~ai~la~~A~~~Ga 99 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCS-VGSRERQAILSSFIA-----AGIAPSRIVTGVLVDSIEDAADQSAEALNAGA 99 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGG-SCHHHHHHHHHHHHH-----TTCCGGGEEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHH-----HhCCCCcEEEeCCCccHHHHHHHHHHHHhcCC
Confidence 556677778889998888766565322 1222 22222111 1122322333333 33556677888888999
Q ss_pred cEEEEecCC----CchhhHHHHHHHHHHhCC--CceEEecccc-------CcHHHHHHH-HCC--CCEEEEcccccccCC
Q psy1056 344 DVVILDSSQ----GNSIYQIEMIKFIKKEYP--DMQVIGGNVL-------FGYQPRATL-LNF--IYQIEMIKFIKKEYP 407 (590)
Q Consensus 344 d~i~V~~~~----G~~~~~l~~i~~i~~~~~--~vpvi~g~v~-------s~~~a~~l~-~~G--vd~i~v~~~~~~~~~ 407 (590)
|.+.+..+. ...+++.+..+.+.+..| ++|+++.|+. +.+...+|. +.. +-+|+-+ ..
T Consensus 100 davlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiKds---~g--- 173 (294)
T 3b4u_A 100 RNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDS---SG--- 173 (294)
T ss_dssp SEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEEEC---CC---
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEEEC---CC---
Confidence 998886643 234667788888888876 7999987753 788888887 542 2233111 00
Q ss_pred CccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcCCCEEEECcc
Q psy1056 408 DMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 408 ~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalGA~~v~~g~~ 461 (590)
....+.++.+.+. +..++. | +...+.-++++||++++-|..
T Consensus 174 -------d~~~~~~~~~~~~--~f~v~~--G--~d~~~l~~l~~G~~G~is~~~ 214 (294)
T 3b4u_A 174 -------NWSHTERLLKEHG--DLAILI--G--DERDLARGVRLGGQGAISGVA 214 (294)
T ss_dssp -------CHHHHHHHHHHHT--TSEEEE--C--CHHHHHHHHHTTCCEEEESGG
T ss_pred -------CHHHHHHHHHhCC--CeEEEE--c--cHHHHHHHHHCCCCEEEeCHH
Confidence 1122333433332 455554 3 355677899999999988754
No 423
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=88.29 E-value=4.6 Score=39.71 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecC---------CCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSS---------QGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI 399 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~---------~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~ 399 (590)
+...+.++.+.++|++++-+..- +|....-+..++.+++++ ++|++. ++.+.+.+..+.+. +|++.+.
T Consensus 52 e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~-Gl~~~t-e~~d~~~~~~l~~~-vd~~kIg 128 (276)
T 1vs1_A 52 EQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA-GLPVVT-EVLDPRHVETVSRY-ADMLQIG 128 (276)
T ss_dssp HHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-TCCEEE-ECCCGGGHHHHHHH-CSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc-CCcEEE-ecCCHHHHHHHHHh-CCeEEEC
Confidence 44556788888999999765431 122223356666666666 788876 99999999999999 9999773
Q ss_pred ccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCC-CHHHHHHHHH----cCCCEE
Q psy1056 400 KFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQ-SVGHVMKALA----LGASTA 456 (590)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~-~~~di~kala----lGA~~v 456 (590)
-.+.+. ...++.++ +.+.||+.+=|.. |..|+..|+. .|..-+
T Consensus 129 s~~~~n-------------~~ll~~~a-~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i 176 (276)
T 1vs1_A 129 ARNMQN-------------FPLLREVG-RSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQV 176 (276)
T ss_dssp GGGTTC-------------HHHHHHHH-HHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCE
T ss_pred cccccC-------------HHHHHHHH-ccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 222222 11222222 4579999999997 9999987765 466433
No 424
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=88.23 E-value=2.8 Score=41.16 Aligned_cols=66 Identities=11% Similarity=-0.049 Sum_probs=52.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCC---chhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHC--CCCEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQG---NSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLN--FIYQI 396 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G---~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~--Gvd~i 396 (590)
+...+.+..+++.|++++-|..... ....+...++.+++.. ++|+.+ +...++.++.+.++ |++.|
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pisI-DT~~~~v~~aal~a~~Ga~iI 104 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPCCL-DSTNPDAIEAGLKVHRGHAMI 104 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCEEE-ECSCHHHHHHHHHHCCSCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeEEE-eCCCHHHHHHHHHhCCCCCEE
Confidence 3456678899999999999876332 2345678888888877 789887 66689999999999 99988
No 425
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=88.19 E-value=3.3 Score=41.33 Aligned_cols=112 Identities=16% Similarity=0.175 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 116 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLV 116 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44567888999999999988776643 22244555555543 36899987543 455567788899999955
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEec-----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIAD-----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia~-----GGi~~~~di~kala 450 (590)
.+.-.. .+...+. -....+...++|||.= .|+.=+.+..+.|+
T Consensus 117 ~~P~y~~---------~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 117 VTPYYSK---------PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp ECCCSSC---------CCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred CCCCCCC---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 211111 1222222 2344444456787752 25555555556665
No 426
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.11 E-value=2.8 Score=41.73 Aligned_cols=96 Identities=7% Similarity=0.066 Sum_probs=62.4
Q ss_pred HHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcc-cccccCCCcccccc-chhHH-HHHHHHHhcCCCcEEecC
Q psy1056 361 MIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIK-FIKKEYPDMQVIGR-NGTAV-YRVAEYASRRGVPVIADG 437 (590)
Q Consensus 361 ~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~-~~~~~~~~~~~~g~-~~~~l-~~~~~~~~~~~v~iia~G 437 (590)
.++.+.+. +-|+++-++-+.-.|+.+.++|+|+|.++- .......|..+.+. +.+.+ ..++..+...++|||+|+
T Consensus 13 ~lr~l~~~--~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~ 90 (298)
T 3eoo_A 13 KFRAAVAA--EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDI 90 (298)
T ss_dssp HHHHHHHH--SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred HHHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEEC
Confidence 45555555 457777788899999999999999998821 11100012444455 55543 345556556679999966
Q ss_pred --CCCCHHHHHH----HHHcCCCEEEE
Q psy1056 438 --GVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 438 --Gi~~~~di~k----alalGA~~v~~ 458 (590)
|..++.++.+ ....||.+|-+
T Consensus 91 d~Gyg~~~~v~~~v~~l~~aGaagv~i 117 (298)
T 3eoo_A 91 DTGWGGAFNIARTIRSFIKAGVGAVHL 117 (298)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 7667777654 34589999944
No 427
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=88.07 E-value=2.9 Score=42.33 Aligned_cols=112 Identities=14% Similarity=0.011 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh-----hHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI-----YQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~-----~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|... .-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 135 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLL 135 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345678889999999999887666431 2245555555443 36899986544 345566777899999955
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEec-----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIAD-----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia~-----GGi~~~~di~kala 450 (590)
.+.-. ..+...+. -....+...++|||.= .|+.-+.+..+.|+
T Consensus 136 ~~P~Y~---------~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 185 (332)
T 2r8w_A 136 APVSYT---------PLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLA 185 (332)
T ss_dssp CCCCSS---------CCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHH
T ss_pred CCCCCC---------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 21111 11222222 2333444456887762 36654555555665
No 428
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=88.06 E-value=3.6 Score=42.87 Aligned_cols=120 Identities=13% Similarity=0.014 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCC------------chhhHHHHHHHHHHhC-CCceEEecccc--CcHHHH----HHH
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQG------------NSIYQIEMIKFIKKEY-PDMQVIGGNVL--FGYQPR----ATL 389 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G------------~~~~~l~~i~~i~~~~-~~vpvi~g~v~--s~~~a~----~l~ 389 (590)
+...+.++..++.|...+-+..... +...-++.++.+|+.+ ++.++++.--. +.++|. .|.
T Consensus 153 e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~ 232 (404)
T 4e5t_A 153 DMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLE 232 (404)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHh
Confidence 3455667788888999998865321 1233477888899887 47888864222 666654 455
Q ss_pred HCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 390 LNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 390 ~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
+.|+++| +- . +..+ ... ..++..+..++||++++.+.+..++.+++..| +|.+++-...
T Consensus 233 ~~~i~~i----Ee--P---~~~~--~~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~ 292 (404)
T 4e5t_A 233 AYDPLWF----EE--P---IPPE--KPE---DMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGR 292 (404)
T ss_dssp GGCCSEE----EC--C---SCTT--CHH---HHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTT
T ss_pred hcCCcEE----EC--C---CCcc--cHH---HHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccc
Confidence 6899988 21 1 1100 222 23333344579999999999999999999988 5777665433
No 429
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=88.02 E-value=3.8 Score=42.57 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecC----CCc--------------hhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH--
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSS----QGN--------------SIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR-- 386 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~----~G~--------------~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~-- 386 (590)
...+.+..+.+.|.+.+-+... .|. ....++.++.+++.+ +++++.+.- .-+.++|.
T Consensus 155 ~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~ 234 (407)
T 2o56_A 155 QYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQF 234 (407)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHH
Confidence 4456777788899999988753 243 134578888888876 578888642 22555554
Q ss_pred --HHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 387 --ATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 387 --~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
.|.+.|+++| +-- +..+ ....+.+++ +..++||++++.+.+..++.+++..| +|.|++-.
T Consensus 235 ~~~l~~~~i~~i----E~P-----~~~~--~~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 297 (407)
T 2o56_A 235 GRMIEELGIFYY----EEP-----VMPL--NPAQMKQVA---DKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDI 297 (407)
T ss_dssp HHHHGGGCCSCE----ECS-----SCSS--SHHHHHHHH---HHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHhcCCCEE----eCC-----CChh--hHHHHHHHH---HhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 4555788877 211 1000 223333343 34579999999999999999999988 68886643
No 430
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=88.00 E-value=1.5 Score=41.94 Aligned_cols=121 Identities=16% Similarity=0.138 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
...+.++.+.+.. +-+.|-.+-- .+| +..++.+.++ ++++-+=-+.|.++|..+.++|++++ |+..+| .
T Consensus 77 ~mi~eA~~L~~~~-~nv~IKIP~T-~eG-l~Ai~~L~~e--GI~vNvTliFS~~QA~laa~AGa~~i--SpFVgR----i 145 (230)
T 1vpx_A 77 GMVREARELAQIS-EYVVIKIPMT-PDG-IKAVKTLSAE--GIKTNVTLVFSPAQAILAAKAGATYV--SPFVGR----M 145 (230)
T ss_dssp HHHHHHHHHHTTC-TTEEEEEESS-HHH-HHHHHHHHHT--TCCEEEEEECSHHHHHHHHHHTCSEE--EEBHHH----H
T ss_pred HHHHHHHHHHHhC-CCEEEEeCCC-HHH-HHHHHHHHHC--CCCEEEEEeCCHHHHHHHHhCCCeEE--Eeccch----h
Confidence 3445666666665 3344433211 122 6677778777 67776656779999999999999988 444444 3
Q ss_pred ccccc-chhHHHHHHHHHhcCC--CcEEecCCCCCHHHHHHHHHcCCCEEEECccc
Q psy1056 410 QVIGR-NGTAVYRVAEYASRRG--VPVIADGGVQSVGHVMKALALGASTAMMGSLL 462 (590)
Q Consensus 410 ~~~g~-~~~~l~~~~~~~~~~~--v~iia~GGi~~~~di~kalalGA~~v~~g~~l 462 (590)
.+||. ....+.++..+.+.++ ..+++. ++|++.++..|..+|||.+-+...+
T Consensus 146 dd~g~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~~~~v~~~~l~G~d~~Tip~~~ 200 (230)
T 1vpx_A 146 DDLSNDGMRMLGEIVEIYNNYGFETEIIAA-SIRHPMHVVEAALMGVDIVTMPFAV 200 (230)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-SCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred hhccccHHHHHHHHHHHHHHcCCCeEEEee-ccCCHHHHHHHHHhCCCEEECCHHH
Confidence 55666 5555666666555443 445554 6999999999999999998777544
No 431
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=87.81 E-value=4.8 Score=41.43 Aligned_cols=116 Identities=12% Similarity=0.011 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHHHH----HHCCCCEEEEccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPRAT----LLNFIYQIEMIKF 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~~l----~~~Gvd~i~v~~~ 401 (590)
+...+.++.+.+.|.+.+-+.... +...-++.++.+++.+ |++++++.- .-+.++|.++ .+.|+ +| +
T Consensus 147 e~~~~~a~~~~~~G~~~iKiK~G~-~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~i----E 220 (378)
T 3eez_A 147 EETRAVIDRYRQRGYVAHSVKIGG-DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MF----E 220 (378)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CE----E
T ss_pred HHHHHHHHHHHhCCCCEEEeccCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EE----e
Confidence 345567777888999998887643 3445578888899888 578888642 2266666544 34666 66 2
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
.. +. .....++.....++||++++-+.+..|+.+++..| +|.|++....
T Consensus 221 --qP---~~-------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 221 --QP---GE-------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp --CC---SS-------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred --cC---CC-------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 11 11 12233444445679999999999999999999987 6888776433
No 432
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=87.78 E-value=3.7 Score=42.27 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-ccc-CcHHH----HHHHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-NVL-FGYQP----RATLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~v~-s~~~a----~~l~~~Gvd~i~v~~~~ 402 (590)
...+.+...++.|...+-+.........-++.++.+++.+ |++++++. |.. +.++| +.|.+.|+++| +-
T Consensus 149 ~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i----Eq 224 (377)
T 3my9_A 149 ADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFI----EQ 224 (377)
T ss_dssp HHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCE----EC
T ss_pred HHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEE----EC
Confidence 3445666777789999888765444445578888999887 57888764 222 55544 45666888888 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
. +... ... ..++.....++||.+++-+.+..|+.+++..| +|.+++-.
T Consensus 225 --P---~~~~--d~~---~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 273 (377)
T 3my9_A 225 --P---VPRR--HLD---AMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKI 273 (377)
T ss_dssp --C---SCTT--CHH---HHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCH
T ss_pred --C---CCcc--CHH---HHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecc
Confidence 1 1100 222 33333344579999999999999999999887 67776653
No 433
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=87.76 E-value=7.2 Score=40.02 Aligned_cols=118 Identities=8% Similarity=-0.004 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC--CchhhHHHHHHHHHHhC-CCceEEeccc--cC-cHHHHH----HHHCCCCEEEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ--GNSIYQIEMIKFIKKEY-PDMQVIGGNV--LF-GYQPRA----TLLNFIYQIEM 398 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~--G~~~~~l~~i~~i~~~~-~~vpvi~g~v--~s-~~~a~~----l~~~Gvd~i~v 398 (590)
+...+.++..++.|.+.+-+.... ++...-++.++.+|+.+ |++++++.-= -+ .++|.+ |.+.|+++|
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~i-- 225 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWI-- 225 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEE--
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEE--
Confidence 456677888889999999988753 34566688899999886 5788886422 26 667654 444788888
Q ss_pred cccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 399 IKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
+- . +..+ .... .++..+..++||++++-+.+..++.+++..| +|.+++-.
T Consensus 226 --Eq--P---~~~~--~~~~---~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 226 --EE--P---VLAD--SLIS---YEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp --EC--S---SCTT--CHHH---HHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred --EC--C---CCcc--cHHH---HHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 21 1 1100 2222 3333334579999999999999999999875 67776544
No 434
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=87.75 E-value=4.1 Score=40.48 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 108 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS 108 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 44567888999999999998776643 22234555554433 36899986544 345567788899999954
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEec-----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIAD-----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia~-----GGi~~~~di~kala 450 (590)
.+.-.. .+...+. -....+...++||+.= .|+.-+.+..+.|+
T Consensus 109 ~~P~y~~---------~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 109 VVPYYNK---------PSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp ECCCSSC---------CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred CCCCCCC---------CCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 221111 1212222 2333444456887762 25555555655664
No 435
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.72 E-value=2.8 Score=42.11 Aligned_cols=69 Identities=14% Similarity=0.062 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhCCCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEYPDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+....+||++|-.. +.+-++.+.++|+|++-+
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMI 108 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44567888999999999987666543 2224555555555457999986554 445567778899999965
No 436
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=87.71 E-value=4.6 Score=42.02 Aligned_cols=117 Identities=13% Similarity=0.068 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecC----CCc-------------------hhhHHHHHHHHHHhC-CCceEEecc--ccCcH
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSS----QGN-------------------SIYQIEMIKFIKKEY-PDMQVIGGN--VLFGY 383 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~----~G~-------------------~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~ 383 (590)
...+.+..+.+.|.+.+-+... .|. ....++.++.+++.+ +++++.+.- .-+.+
T Consensus 153 ~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~ 232 (410)
T 2gl5_A 153 EYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLLGTN 232 (410)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHH
T ss_pred HHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHH
Confidence 4456777788899999998753 343 133568888888876 578888642 22566
Q ss_pred HHH----HHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEE
Q psy1056 384 QPR----ATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMM 458 (590)
Q Consensus 384 ~a~----~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~ 458 (590)
+|. .|.+.|+++| +-- +... ....+.+++ +..++||++++.+.+..++.+++..| +|.|++
T Consensus 233 ~ai~~~~~l~~~~i~~i----E~P-----~~~~--~~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 233 SAIQFAKAIEKYRIFLY----EEP-----IHPL--NSDNMQKVS---RSTTIPIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp HHHHHHHHHGGGCEEEE----ECS-----SCSS--CHHHHHHHH---HHCSSCEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHhcCCCeE----ECC-----CChh--hHHHHHHHH---hhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 654 4445777777 211 1000 223333343 34579999999999999999999988 688866
Q ss_pred Cc
Q psy1056 459 GS 460 (590)
Q Consensus 459 g~ 460 (590)
-.
T Consensus 299 k~ 300 (410)
T 2gl5_A 299 DL 300 (410)
T ss_dssp CT
T ss_pred Cc
Confidence 43
No 437
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.54 E-value=2.5 Score=42.21 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=61.4
Q ss_pred HHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---ccccccCCCcccccc-chhHH-HHHHHHHhcCCCcEE
Q psy1056 360 EMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KFIKKEYPDMQVIGR-NGTAV-YRVAEYASRRGVPVI 434 (590)
Q Consensus 360 ~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~~~~~~~~~~~~g~-~~~~l-~~~~~~~~~~~v~ii 434 (590)
..++.+++. +-|+++-++-+.-.|+.+.++|+|+|.++ ..... |..+.+. +.+.+ ..++..+...++|||
T Consensus 19 ~~lr~l~~~--~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~---G~pD~~~vt~~em~~~~~~I~r~~~~pvi 93 (305)
T 3ih1_A 19 NRFRALVEA--NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASK---GLPDLGIVTSTEVAERARDLVRATDLPVL 93 (305)
T ss_dssp HHHHHHHHS--SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHH---TCCSSSCSCHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHhC--CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhC---CCCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 344444444 45777778889999999999999999882 22212 2444455 55543 334555555579999
Q ss_pred ecC--CCCCHHHHHH----HHHcCCCEEEE
Q psy1056 435 ADG--GVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 435 a~G--Gi~~~~di~k----alalGA~~v~~ 458 (590)
+|+ |..++.++.+ ....||++|-+
T Consensus 94 aD~d~Gyg~~~~v~~~v~~l~~aGaagv~i 123 (305)
T 3ih1_A 94 VDIDTGFGGVLNVARTAVEMVEAKVAAVQI 123 (305)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 966 7767777654 34579999943
No 438
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.46 E-value=4.8 Score=41.91 Aligned_cols=118 Identities=13% Similarity=0.017 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCC--------chhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH----HHHHCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQG--------NSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR----ATLLNFI 393 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G--------~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~----~l~~~Gv 393 (590)
+...+.++..++.|...+-+....+ ....-++.++.+|+.+ |++++++.- .-+.++|. .|.+.|+
T Consensus 127 e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i 206 (405)
T 3rr1_A 127 ADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRP 206 (405)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 3455677788889999887722211 1233478889999988 578888632 22666654 4556888
Q ss_pred CEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 394 YQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 394 d~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
++| +- . +... ... ..++..+..++||++++.+.+..++.+++..| +|.+++-.
T Consensus 207 ~~i----Ee--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 207 LFI----EE--P---VLAE--QAE---TYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp SCE----EC--S---SCCS--STH---HHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred CEE----EC--C---CCcc--cHH---HHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 888 21 1 1000 222 23444445679999999999999999999886 67876643
No 439
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=87.40 E-value=3.6 Score=41.28 Aligned_cols=67 Identities=16% Similarity=0.238 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHcCCcEEEEecC---CCch-------hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSS---QGNS-------IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQI 396 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~---~G~~-------~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i 396 (590)
+...+.+..+++.|+++|-|... -|.. ..++..++.+++.+|++|+.+ +....+.++.++++|++.|
T Consensus 65 ~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI-DT~~~~VaeaAl~aGa~iI 141 (318)
T 2vp8_A 65 AAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV-DTWRAQVAKAACAAGADLI 141 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE-ECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE-eCCCHHHHHHHHHhCCCEE
Confidence 45667889999999999988641 1211 124556788888877889877 7778999999999999988
No 440
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=87.35 E-value=6.9 Score=40.67 Aligned_cols=115 Identities=12% Similarity=0.015 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecC--CCc--------------hhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHHH---
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSS--QGN--------------SIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPRA--- 387 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~--~G~--------------~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~~--- 387 (590)
...+.+..+.+.|.+.+-+... .|. ....++.++.+++.+ +++++.+.- .-+.++|.+
T Consensus 152 ~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~ 231 (410)
T 2qq6_A 152 EYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFAR 231 (410)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHH
Confidence 4456777888899999988763 232 134578888888876 578887632 226666644
Q ss_pred -HHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEE
Q psy1056 388 -TLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMM 458 (590)
Q Consensus 388 -l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~ 458 (590)
|.+.|+++| +-- + ....+...++..+..++||++++.+.+..++.+++..| +|.+++
T Consensus 232 ~l~~~~i~~i----EeP-----~-----~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 232 AMEPFGLLWL----EEP-----T-----PPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp HHGGGCCSEE----ECC-----S-----CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHhhcCCCeE----ECC-----C-----ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 455788887 211 1 01112233334344579999999999999999999987 688866
No 441
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=87.34 E-value=2.3 Score=41.30 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCcEEEEecC-CCchhh--HHHHHHHHHHhCCC-ceEE-eccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSS-QGNSIY--QIEMIKFIKKEYPD-MQVI-GGNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~-~G~~~~--~l~~i~~i~~~~~~-vpvi-~g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
..++.+.+.|++++.--.+ -|...+ -...++.+++..++ +||| .|+|.++++|..+.++|+|++-|
T Consensus 136 ~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 136 VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 5566677788888743121 122211 14567888873446 8888 57888999999999999999955
No 442
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.32 E-value=1.2 Score=45.92 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred HhCCCceEEecccc---CcHHHHHHH-HCCCCEEEEcccccccCCCcccccc-chh-HHHHHHHHHhcCCCcEEecCCC-
Q psy1056 367 KEYPDMQVIGGNVL---FGYQPRATL-LNFIYQIEMIKFIKKEYPDMQVIGR-NGT-AVYRVAEYASRRGVPVIADGGV- 439 (590)
Q Consensus 367 ~~~~~vpvi~g~v~---s~~~a~~l~-~~Gvd~i~v~~~~~~~~~~~~~~g~-~~~-~l~~~~~~~~~~~v~iia~GGi- 439 (590)
+..|+.++++ +++ +.+.+++++ .+|+|++.+.+...++. ...-|- ... .+..+....+..++|||+-| +
T Consensus 140 r~~P~~~~ia-nig~~~~~e~~~~~ve~~~adal~ihln~~qe~--~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg 215 (365)
T 3sr7_A 140 KSRPHLLLAT-NIGLDKPYQAGLQAVRDLQPLFLQVHINLMQEL--LMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VG 215 (365)
T ss_dssp -----CCEEE-EEETTSCHHHHHHHHHHHCCSCEEEEECHHHHH--TSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CS
T ss_pred hhCCCCcEEE-EeCCCCCHHHHHHHHHhcCCCEEEEeccccccc--cCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CC
Confidence 3347787763 444 566666666 68999997622211100 001122 221 12234444444579999963 6
Q ss_pred --CCHHHHHHHHHcCCCEEEECcc
Q psy1056 440 --QSVGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 440 --~~~~di~kalalGA~~v~~g~~ 461 (590)
.++.++.++..+|||++.++..
T Consensus 216 ~g~s~e~A~~l~~aGad~I~V~g~ 239 (365)
T 3sr7_A 216 FGMDVKTIQTAIDLGVKTVDISGR 239 (365)
T ss_dssp SCCCHHHHHHHHHHTCCEEECCCB
T ss_pred CCCCHHHHHHHHHcCCCEEEEeCC
Confidence 6899999999999999987643
No 443
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=87.29 E-value=4.3 Score=42.11 Aligned_cols=117 Identities=10% Similarity=-0.094 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCcEEEEe-cCC--CchhhHHHHHHHHHHhC-CCceEEecc--cc-CcHHHHH----HHHCCCCEEEEcc
Q psy1056 332 KNRLKLLSQAGVDVVILD-SSQ--GNSIYQIEMIKFIKKEY-PDMQVIGGN--VL-FGYQPRA----TLLNFIYQIEMIK 400 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~-~~~--G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~-s~~~a~~----l~~~Gvd~i~v~~ 400 (590)
.+.++..++.|...+-++ ... .+...-++.++.+++.+ |+.++++.- .- +.++|.+ |.+.|+++|
T Consensus 157 ~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~i---- 232 (394)
T 3mqt_A 157 KPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFI---- 232 (394)
T ss_dssp HHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEE----
T ss_pred HHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEE----
Confidence 346777888999998883 332 23445678899999887 578888642 22 4565544 445788888
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
+- . +... .... .++..+..++||++++.+.+..++.+++..| +|.|++-...
T Consensus 233 Ee--P---~~~~--~~~~---~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 285 (394)
T 3mqt_A 233 EA--C---LQHD--DLIG---HQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNR 285 (394)
T ss_dssp ES--C---SCTT--CHHH---HHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTT
T ss_pred EC--C---CCcc--cHHH---HHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccc
Confidence 21 1 1100 2222 3333334579999999999999999999886 7888665433
No 444
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=87.24 E-value=34 Score=36.44 Aligned_cols=120 Identities=16% Similarity=0.106 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHH---HHHCCCCEEEE-----ccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRA---TLLNFIYQIEM-----IKF 401 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~---l~~~Gvd~i~v-----~~~ 401 (590)
...+-+...++.|++.+.+--.+. .+.+.+..+.+.+.-..+++++ -+-+++.... .+++ +|+|-| +.+
T Consensus 194 ~D~~DI~~~l~~g~d~I~lpfV~s-aeDv~~~~~~l~~~~~~i~Iia-kIEt~eav~nldeI~~~-~DgImvgrgDLgve 270 (500)
T 1a3w_A 194 KDKEDLRFGVKNGVHMVFASFIRT-ANDVLTIREVLGEQGKDVKIIV-KIENQQGVNNFDEILKV-TDGVMVARGDLGIE 270 (500)
T ss_dssp HHHHHHHHHHHHTCSEEEECSCCS-HHHHHHHHHHHHHHHTTSEEEE-EECSSHHHHSHHHHHHH-SSEEEECHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEECCCCC-HHHHHHHHHHHHhcCCCcEEEE-EECChHHHHhHHHHHHh-CCEEEECchHhhhh
Confidence 344556778889999998744332 2333333344433323566665 4455544433 3333 688855 111
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCCCcEEe---------cCCCCCH---HHHHHHHHcCCCEEEECc
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIA---------DGGVQSV---GHVMKALALGASTAMMGS 460 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia---------~GGi~~~---~di~kalalGA~~v~~g~ 460 (590)
.... . -+.....+...|...++|+|. ....-+- .|++.|+..|+|+||++.
T Consensus 271 lg~~-----~---v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~ 333 (500)
T 1a3w_A 271 IPAP-----E---VLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSG 333 (500)
T ss_dssp TTGG-----G---HHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBST
T ss_pred cCcH-----H---HHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecc
Confidence 1111 0 122233444555566899985 2332221 299999999999999873
No 445
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=87.10 E-value=2.9 Score=39.96 Aligned_cols=123 Identities=9% Similarity=0.043 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE--ecccc-------CcHHHHHHHHCCCCEEEEcc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI--GGNVL-------FGYQPRATLLNFIYQIEMIK 400 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi--~g~v~-------s~~~a~~l~~~Gvd~i~v~~ 400 (590)
+..+..+...+.|+..++|+.. ++...+.++.. ++.+. ++.-. -..+++++++.|||-||+-+
T Consensus 30 ~i~~lc~eA~~~~~~aVcV~p~------~v~~a~~l~~~--~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVi 101 (231)
T 3ndo_A 30 DVTALVDEAADLGVFAVCVSPP------LVSVAAGVAPS--GLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVI 101 (231)
T ss_dssp HHHHHHHHHHHHTCSEEEECGG------GHHHHHHHCCT--TCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHhCCcEEEECHH------HHHHHHHhcCC--CCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4445677777889999998443 12222233211 33332 22111 13477889999999999843
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCC----CHHHHHHH----HHcCCCEEEECccc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQ----SVGHVMKA----LALGASTAMMGSLL 462 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~----~~~di~ka----lalGA~~v~~g~~l 462 (590)
..+..++ ..|.....-+..+.++|...-+.+|..-|.. +..++.+| ..+|||+|=-.+-|
T Consensus 102 nig~lk~--g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf 169 (231)
T 3ndo_A 102 DVGAALA--GDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGF 169 (231)
T ss_dssp CHHHHHT--TCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSC
T ss_pred ehHhhhc--ccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCC
Confidence 3322100 1122233345566666654346788887888 89888874 45799999444433
No 446
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=87.01 E-value=4.1 Score=42.24 Aligned_cols=116 Identities=15% Similarity=0.050 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHcCCcEEEEecC----CCc--------------hhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH--
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSS----QGN--------------SIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR-- 386 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~----~G~--------------~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~-- 386 (590)
...+.+..+.+.|.+.+-+... .|. .....+.++.+++.. +++++.+.- .-+.++|.
T Consensus 149 ~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~ 228 (403)
T 2ox4_A 149 EYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQF 228 (403)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 4456777788899999988753 343 134578888888876 578888642 22556654
Q ss_pred --HHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 387 --ATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 387 --~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
.|.+.|+++| +-- +..+ ....+.+++ +..++||++++.+.+..++.+++..| +|.|++-
T Consensus 229 ~~~l~~~~i~~i----E~P-----~~~~--d~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 290 (403)
T 2ox4_A 229 AKAIEEFNIFFY----EEI-----NTPL--NPRLLKEAK---KKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPD 290 (403)
T ss_dssp HHHHGGGCEEEE----ECC-----SCTT--STHHHHHHH---HTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHhhCCCEE----eCC-----CChh--hHHHHHHHH---HhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 4445777777 211 1100 222233333 34579999999999999999999987 6888764
No 447
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=86.98 E-value=3.5 Score=41.37 Aligned_cols=69 Identities=13% Similarity=0.017 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh-----hHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI-----YQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~-----~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|... .-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv 123 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLV 123 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 445678889999999999877766432 2234555555433 36899986544 345567788899999955
No 448
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=86.97 E-value=2.9 Score=43.33 Aligned_cols=117 Identities=9% Similarity=-0.024 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC-----------------chhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHH---
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG-----------------NSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPR--- 386 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G-----------------~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~--- 386 (590)
...+.+..+.+.|.+.+-+...+| .....++.++.+++.+ +++++.+.- .-+.++|.
T Consensus 140 ~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~ 219 (392)
T 2poz_A 140 EFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFC 219 (392)
T ss_dssp HHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHH
Confidence 345667778889999998876632 1134568888888876 578888642 22566654
Q ss_pred -HHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 387 -ATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 387 -~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
.|.+.|+++| +-- +... ....+.+++ +..++||++++.+.+..++.+++..| +|.+++-.
T Consensus 220 ~~l~~~~i~~i----E~P-----~~~~--~~~~~~~l~---~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 281 (392)
T 2poz_A 220 RKIGELDICFV----EEP-----CDPF--DNGALKVIS---EQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDI 281 (392)
T ss_dssp HHHGGGCEEEE----ECC-----SCTT--CHHHHHHHH---HHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCT
T ss_pred HHHHhcCCCEE----ECC-----CCcc--cHHHHHHHH---hhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 3445677776 211 1000 222333333 34579999999999999999999887 68886643
No 449
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=86.92 E-value=1.5 Score=43.93 Aligned_cols=64 Identities=13% Similarity=-0.057 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-------hhHHHHHHHHHHhCCCceEEeccc----cCcHHHHHHHHCCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-------IYQIEMIKFIKKEYPDMQVIGGNV----LFGYQPRATLLNFIY 394 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-------~~~l~~i~~i~~~~~~vpvi~g~v----~s~~~a~~l~~~Gvd 394 (590)
...+.+..+++.|+++|-|......+ +...+.++.+++.+ ++|+.+++. ..++.++.+.++|++
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCCCCCHHHHHHHHHhCCC
Confidence 45677888899999999987632221 23466788888887 899999777 789999999999997
No 450
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=86.89 E-value=4.3 Score=40.30 Aligned_cols=116 Identities=13% Similarity=0.066 Sum_probs=67.2
Q ss_pred HHHHHHcCCcEEE--EecCCCc--hhhHHHHHHHHH---HhCCCceEEec---------cc---cC----cHHHHHHHHC
Q psy1056 335 LKLLSQAGVDVVI--LDSSQGN--SIYQIEMIKFIK---KEYPDMQVIGG---------NV---LF----GYQPRATLLN 391 (590)
Q Consensus 335 ~~~li~~gad~i~--V~~~~G~--~~~~l~~i~~i~---~~~~~vpvi~g---------~v---~s----~~~a~~l~~~ 391 (590)
++..+..|+|.+. +...-|. ....++.+..+. ..| ++|+++- .+ .+ ...++.+.++
T Consensus 134 Ve~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~-GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 134 VSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAA-QLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp HHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHT-TCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHc-CCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 4556677999866 4333332 233344444333 345 6776641 12 13 2345666778
Q ss_pred CCC----EEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCC--HHHH----HHHHH-cCCCEEEECc
Q psy1056 392 FIY----QIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQS--VGHV----MKALA-LGASTAMMGS 460 (590)
Q Consensus 392 Gvd----~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~--~~di----~kala-lGA~~v~~g~ 460 (590)
|+| +|++... . +..+......+|++..||=.+ ..+. ..|+. .||..+.+|+
T Consensus 213 GADs~~tivK~~y~---e---------------~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGR 274 (307)
T 3fok_A 213 GNDSSYTWMKLPVV---E---------------EMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGR 274 (307)
T ss_dssp SSCCSSEEEEEECC---T---------------THHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECT
T ss_pred CCCcCCCEEEeCCc---H---------------HHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeech
Confidence 999 9976322 1 123333444689998888774 4444 45888 6999999997
Q ss_pred cccC-CCCCC
Q psy1056 461 LLAG-TSEAP 469 (590)
Q Consensus 461 ~l~~-~~es~ 469 (590)
-+.. +.+.|
T Consensus 275 NIfQ~~~~dp 284 (307)
T 3fok_A 275 TLLYPQDGDV 284 (307)
T ss_dssp TTSSCSSSCH
T ss_pred hhccCCCCCH
Confidence 6643 34444
No 451
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=86.88 E-value=3.1 Score=41.63 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC---Cch------------hhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCC
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ---GNS------------IYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFI 393 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~---G~~------------~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gv 393 (590)
+...+.+..+++.||++|-|.... |.. ..+...++.+++.+ ++|+.+ +...++.++.++++|+
T Consensus 49 ~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISI-DT~~~~Va~aAl~aGa 126 (314)
T 3tr9_A 49 NSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISV-DTSRPRVMREAVNTGA 126 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEE-ECSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEE-eCCCHHHHHHHHHcCC
Confidence 456778999999999999886421 211 11456677777776 788877 7778999999999999
Q ss_pred CEE
Q psy1056 394 YQI 396 (590)
Q Consensus 394 d~i 396 (590)
+.|
T Consensus 127 ~iI 129 (314)
T 3tr9_A 127 DMI 129 (314)
T ss_dssp CEE
T ss_pred CEE
Confidence 988
No 452
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=86.87 E-value=11 Score=39.14 Aligned_cols=114 Identities=11% Similarity=0.080 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHc-CCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEec-c-ccCcHHHHH----HHHCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQA-GVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGG-N-VLFGYQPRA----TLLNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~-gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g-~-v~s~~~a~~----l~~~Gvd~i~v~~~~ 402 (590)
...+.++..++. |...+-+... .+...-++.++.+++.+|++++++. | .-+.++|.+ |.+.|+.+| +
T Consensus 171 ~~~~~a~~~~~~~G~~~~K~KvG-~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~i----E- 244 (398)
T 4dye_A 171 AMAEHAVRVVEEGGFDAVKLKGT-TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYL----E- 244 (398)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECC-SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEE----E-
T ss_pred HHHHHHHHHHHhcCCCEEEEecC-CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEE----c-
Confidence 445667778888 9999988765 3445557888999998888888863 2 226677654 445788877 2
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECc
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGS 460 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~ 460 (590)
.. +. .+...++.....++||.++.-+.+..|+.+++..| +|.+++-.
T Consensus 245 -qP---~~-------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 292 (398)
T 4dye_A 245 -DP---CV-------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDV 292 (398)
T ss_dssp -CC---SS-------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECH
T ss_pred -CC---CC-------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCc
Confidence 11 11 22333444445579999999999999999999987 67777654
No 453
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=86.83 E-value=8.4 Score=40.47 Aligned_cols=118 Identities=13% Similarity=-0.033 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHHHHH----HCCCCEEEEcccc
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPRATL----LNFIYQIEMIKFI 402 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~~l~----~~Gvd~i~v~~~~ 402 (590)
...+.+..+.+.|.+.+-+.... +....++.++.+++.+ |++++.+.- .-+.++|.++. +.|+++| +-
T Consensus 201 ~~~~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----Eq 275 (441)
T 2hxt_A 201 KLVRLAKEAVADGFRTIKLKVGA-NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWI----EE 275 (441)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCE----EC
T ss_pred HHHHHHHHHHHcCCCEEEEccCC-CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCee----eC
Confidence 35567778889999999887653 3455578889998876 578887632 22666665544 4677777 21
Q ss_pred cccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECcc
Q psy1056 403 KKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSL 461 (590)
Q Consensus 403 ~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~ 461 (590)
- +... .......+++... ++||++++.+.++.++.+.+..| +|.|++-..
T Consensus 276 P-----~~~~--d~~~~~~l~~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 326 (441)
T 2hxt_A 276 P-----TSPD--DVLGHAAIRQGIT--PVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAA 326 (441)
T ss_dssp C-----SCTT--CHHHHHHHHHHHT--TSCEEECTTCCSHHHHHHHHHHTCCSEECCCTT
T ss_pred C-----CCHH--HHHHHHHHHhhCC--CCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcc
Confidence 1 1100 2233334443321 59999999999999999999887 688876543
No 454
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.80 E-value=1.3 Score=44.32 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCC-------------------------Cch--hhHHHHHHHHHHhCC-CceEE-eccccC
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQ-------------------------GNS--IYQIEMIKFIKKEYP-DMQVI-GGNVLF 381 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~-------------------------G~~--~~~l~~i~~i~~~~~-~vpvi-~g~v~s 381 (590)
..+.++.+.++|++.+.+.... |.. ...++.++.+++..+ ++||+ .|+|.+
T Consensus 174 ~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~ 253 (311)
T 1jub_A 174 FDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIET 253 (311)
T ss_dssp HHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCS
T ss_pred HHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 4456788888999998775321 110 113577888888764 78988 688889
Q ss_pred cHHHHHHHHCCCCEEEE
Q psy1056 382 GYQPRATLLNFIYQIEM 398 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v 398 (590)
.++|.+++.+|||++-+
T Consensus 254 ~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 254 GQDAFEHLLCGATMLQI 270 (311)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999944
No 455
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.78 E-value=1.8 Score=44.06 Aligned_cols=68 Identities=22% Similarity=0.196 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC---C---chh-hHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCC-CCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ---G---NSI-YQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNF-IYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~---G---~~~-~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~G-vd~i~v 398 (590)
+..+.++.+.+.|++.+++.... . ... ...+.++.+++.+ ++|+++ |.+.++++|.++++.| +|.|-+
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 45677888899999999986531 0 111 2367788888887 789985 5566999999999999 999943
No 456
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=86.73 E-value=2.7 Score=41.83 Aligned_cols=93 Identities=13% Similarity=0.016 Sum_probs=58.8
Q ss_pred HHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---ccccccCCCcccccc-chhH-HHHHHHHHhcCCCcEEe
Q psy1056 361 MIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KFIKKEYPDMQVIGR-NGTA-VYRVAEYASRRGVPVIA 435 (590)
Q Consensus 361 ~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~~~~~~~~~~~~g~-~~~~-l~~~~~~~~~~~v~iia 435 (590)
.+..+.+. +-|+.+-++-+.-.|+.+.++|+|+|.++ ..... |..+.+. +.+. +..++..+...++|||+
T Consensus 10 ~lr~l~~~--~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~l---G~pD~~~vt~~em~~~~~~I~~~~~~Pvia 84 (295)
T 1s2w_A 10 QLKQMLNS--KDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQL---GVRDSNEASWTQVVEVLEFMSDASDVPILL 84 (295)
T ss_dssp HHHHHHHS--SSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC------------CHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhC---CCCCCCCCCHHHHHHHHHHHHhcCCCCEEe
Confidence 34444443 45777778889999999999999999883 22222 2444454 5544 44456666666799999
Q ss_pred cC--CCCCHHHHHH----HHHcCCCEEEE
Q psy1056 436 DG--GVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 436 ~G--Gi~~~~di~k----alalGA~~v~~ 458 (590)
|+ |..++.++++ ....||.+|-+
T Consensus 85 D~d~Gyg~~~~v~~~v~~l~~aGaagv~i 113 (295)
T 1s2w_A 85 DADTGYGNFNNARRLVRKLEDRGVAGACL 113 (295)
T ss_dssp ECCSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 75 7667766654 45689999944
No 457
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.69 E-value=3.9 Score=41.05 Aligned_cols=92 Identities=14% Similarity=0.063 Sum_probs=61.9
Q ss_pred HHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---cc-ccccCCCcccccc-chhHH-HHHHHHHhcC-CCcEE
Q psy1056 362 IKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KF-IKKEYPDMQVIGR-NGTAV-YRVAEYASRR-GVPVI 434 (590)
Q Consensus 362 i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~-~~~~~~~~~~~g~-~~~~l-~~~~~~~~~~-~v~ii 434 (590)
+..+.+. +-|+.+-++-+.-.|+.+.++|+|+|.++ +. .... ..+.+. +.+.+ ..++..+... ++|||
T Consensus 31 lr~l~~~--~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG---~pD~~~vt~~em~~~~~~I~r~~~~~Pvi 105 (318)
T 1zlp_A 31 MHRLIEE--HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLG---LPDFGLLTTTEVVEATRRITAAAPNLCVV 105 (318)
T ss_dssp HHHHHHH--SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHC---CCSSSCSCHHHHHHHHHHHHHHSSSSEEE
T ss_pred HHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcC---CCCCCCCCHHHHHHHHHHHHhhccCCCEE
Confidence 4444444 45677778889999999999999999882 22 1122 444455 55543 3455555555 79999
Q ss_pred ecC--CCCCHHHHHH----HHHcCCCEEEE
Q psy1056 435 ADG--GVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 435 a~G--Gi~~~~di~k----alalGA~~v~~ 458 (590)
+|. |..++.++++ .+..||.+|-+
T Consensus 106 aD~d~Gyg~~~~v~~tv~~l~~aGaagv~i 135 (318)
T 1zlp_A 106 VDGDTGGGGPLNVQRFIRELISAGAKGVFL 135 (318)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EeCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 976 7667776654 45689999954
No 458
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=86.60 E-value=3.8 Score=41.07 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 124 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLL 124 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 34557888899999999987665543 22234455444433 36899986554 345566778899999955
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEec-----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIAD-----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia~-----GGi~~~~di~kala 450 (590)
.+.-.. .+...+. -....+...++|||.= .|+.=+.+..+.|+
T Consensus 125 ~~P~y~~---------~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 125 VTPYYNK---------PTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp ECCCSSC---------CCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCCCC---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 211111 1212222 2333444456787762 25554555555665
No 459
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=86.58 E-value=3.6 Score=41.15 Aligned_cols=69 Identities=12% Similarity=0.012 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv 113 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLV 113 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 34567888999999999987665543 12244555555433 36899986554 345566777899999955
No 460
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=86.52 E-value=2.7 Score=42.16 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC---Cc--------hhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ---GN--------SIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQI 396 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~---G~--------~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i 396 (590)
+...+.+..+++.|+++|-|.... |. ...++..++.+++.+ ++|+.+ +...++.++.++++|++.|
T Consensus 33 ~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSI-DT~~~~Va~aAl~aGa~iI 109 (314)
T 2vef_A 33 EQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISI-DTWKSQVAEAALAAGADLV 109 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEE-ECSCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEE-eCCCHHHHHHHHHcCCCEE
Confidence 455678899999999999887521 21 122456677788776 788877 7789999999999999988
No 461
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=86.50 E-value=4.9 Score=41.20 Aligned_cols=113 Identities=14% Similarity=0.019 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHHHH----H-HHCCCCEEEEcc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQPRA----T-LLNFIYQIEMIK 400 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a~~----l-~~~Gvd~i~v~~ 400 (590)
+...+.+..+.+.|.+.+-++... +....++.++.+++.+ +++++.+.- .-+.+++.+ | .+.|+ +|
T Consensus 148 ~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~i---- 221 (371)
T 2ps2_A 148 EDMRARVAKYRAKGYKGQSVKISG-EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-AL---- 221 (371)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCS-CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EE----
T ss_pred HHHHHHHHHHHHhChheEEeecCC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cC----
Confidence 345566777888999999887653 3455578888888877 468887642 226666644 3 44577 66
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
+- . +. . +...++..+..++||++++.+.++.++.+++..| +|.+++-
T Consensus 222 E~--P---~~----~---~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 222 EA--P---CA----T---WRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp EC--C---BS----S---HHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred cC--C---cC----C---HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 21 1 11 1 2233444444579999999999999999999987 6888774
No 462
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=86.45 E-value=11 Score=38.44 Aligned_cols=120 Identities=9% Similarity=0.011 Sum_probs=80.3
Q ss_pred chhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-ccc-CcHHHH----HHHHCCCCEEEEcc
Q psy1056 328 READKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-NVL-FGYQPR----ATLLNFIYQIEMIK 400 (590)
Q Consensus 328 ~~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~v~-s~~~a~----~l~~~Gvd~i~v~~ 400 (590)
.+...+.++..++.|...+-+.... +...-++.++.+++.+ |+.++++. |.. +.++|. .|.+.|+++|
T Consensus 141 ~e~~~~~a~~~~~~G~~~~K~KvG~-~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i---- 215 (368)
T 3q45_A 141 PHKMAADAVQIKKNGFEIIKVKVGG-SKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHC---- 215 (368)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS-CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCE----
T ss_pred HHHHHHHHHHHHHcCCCeEEEEecC-CHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEE----
Confidence 3455667777888999998887643 2344578889999887 67888864 222 666654 4555788888
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
+- . +..+ ....+..++ +..++||.+++.+.+..|+.+++..| +|.+++-...
T Consensus 216 Eq--P---~~~~--~~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 268 (368)
T 3q45_A 216 EE--P---VSRN--LYTALPKIR---QACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSK 268 (368)
T ss_dssp EC--C---BCGG--GGGGHHHHH---HTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTT
T ss_pred EC--C---CChh--HHHHHHHHH---hhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhh
Confidence 21 1 1100 222233333 34579999999999999999999876 6888776544
No 463
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=86.42 E-value=2.5 Score=43.85 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCC--------chhhHHHHHHHHHHhC-CCceEEec--cccCcHHHHHHH----HCCCC
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQG--------NSIYQIEMIKFIKKEY-PDMQVIGG--NVLFGYQPRATL----LNFIY 394 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G--------~~~~~l~~i~~i~~~~-~~vpvi~g--~v~s~~~a~~l~----~~Gvd 394 (590)
...+.+..+.+.|.+.+-+....+ .....++.++.+++.+ +++++++. ..-+.++|.++. +.|++
T Consensus 151 ~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~ 230 (392)
T 3p3b_A 151 LMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNLY 230 (392)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 445667778889999998876543 2345578888888876 57887753 222667665544 35666
Q ss_pred EEEEcccccccCCCccccccchhHHHHHHHHHh--cCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 395 QIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYAS--RRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 395 ~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~--~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
+| + .. +. + ......++++.+. ..++||++++ +.++.++.+++..| +|.|++-
T Consensus 231 ~i----E--~P---~~-~--d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 231 WL----E--EA---FH-E--DEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp EE----E--CS---SS-C--CHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred EE----e--cC---Cc-c--cHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 65 2 11 11 0 2223333443211 0469999999 99999999999998 6777553
No 464
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=86.42 E-value=1.3 Score=44.16 Aligned_cols=64 Identities=19% Similarity=0.133 Sum_probs=48.5
Q ss_pred HHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.+....++|+|++-+++ .....+....+.++..+|++++.+-+..+.++++.+.++|||+|-+
T Consensus 208 ee~~~A~~aGaD~I~ld~--~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~v 271 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDN--FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISM 271 (299)
T ss_dssp HHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEEC
T ss_pred HHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 445556678999999876 3344555566667777888898865555999999999999999955
No 465
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=86.41 E-value=4.2 Score=40.29 Aligned_cols=69 Identities=12% Similarity=0.037 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 102 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALL 102 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 44567888899999999988776643 22244555555443 36899986554 345566788899999954
No 466
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=86.38 E-value=4.8 Score=39.90 Aligned_cols=113 Identities=12% Similarity=0.050 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhCC-CceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEYP-DMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~~-~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+... .+||++|-.. +.+-++.+.++|+|++-+
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 104 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILL 104 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 34567888999999999988776643 223455666666543 5899976554 345566777899999955
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcC---CCcEEe-c----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRR---GVPVIA-D----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~---~v~iia-~----GGi~~~~di~kala 450 (590)
.+.-.+ ..+...+. -....+... ++|||. . .|+.-+.+..+.|+
T Consensus 105 ~~P~y~~--------~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 105 APPSYFK--------NVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp CCCCSSC--------SCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCcCCC--------CCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 221111 01112222 223333334 588876 2 36655556666665
No 467
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=86.37 E-value=6.8 Score=40.54 Aligned_cols=116 Identities=7% Similarity=-0.094 Sum_probs=76.2
Q ss_pred HHHHHHHHHcCCcEEEEe-cCC--CchhhHHHHHHHHHHhC-CCceEEecc--cc-CcHHHH----HHHHCCCCEEEEcc
Q psy1056 332 KNRLKLLSQAGVDVVILD-SSQ--GNSIYQIEMIKFIKKEY-PDMQVIGGN--VL-FGYQPR----ATLLNFIYQIEMIK 400 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~-~~~--G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~-s~~~a~----~l~~~Gvd~i~v~~ 400 (590)
.+.++..++.|...+-++ ... .+...-++.++.+|+.+ |+.++++.- .- +.++|. .|.+.|+++|
T Consensus 162 ~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~i---- 237 (394)
T 3mkc_A 162 APLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFA---- 237 (394)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEE----
T ss_pred HHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEE----
Confidence 346777888999998883 331 23445578899999887 578888642 22 456654 4445788888
Q ss_pred cccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECcc
Q psy1056 401 FIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSL 461 (590)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~ 461 (590)
+- . +... ... ..++..+..++||++++.+.+..++.+++..| +|.+++-..
T Consensus 238 Ee--P---~~~~--d~~---~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 289 (394)
T 3mkc_A 238 EA--T---LQHD--DLS---GHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYN 289 (394)
T ss_dssp ES--C---SCTT--CHH---HHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred EC--C---CCch--hHH---HHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCcc
Confidence 21 1 1000 222 23333334579999999999999999999987 688866543
No 468
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=86.32 E-value=3.5 Score=40.86 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh-----hHHHHHHHHHHhC-CCceEEecccc-C----cHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI-----YQIEMIKFIKKEY-PDMQVIGGNVL-F----GYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~-----~~l~~i~~i~~~~-~~vpvi~g~v~-s----~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|... .-.+.++...+.. ..+||++|-.. + .+-++.+.++|+|++-+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 102 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT 102 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 345678888999999999877666431 2244555555433 36899986554 2 34455566699999954
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEe-c----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIA-D----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia-~----GGi~~~~di~kala 450 (590)
.+.-. ..+...+. -....+...++|||. . .|+.-+.+..+.|+
T Consensus 103 ~~P~y~---------~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 103 VTPYYN---------RPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp ECCCSS---------CCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred CCCCCC---------CCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHH
Confidence 21111 11222222 234444455688876 2 36655556666665
No 469
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=86.30 E-value=3.3 Score=41.62 Aligned_cols=69 Identities=14% Similarity=-0.011 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 125 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMV 125 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 44567888999999999987665543 22244555555443 36899986543 345567788899999955
No 470
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=86.28 E-value=1.1 Score=44.95 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHcC-CcEEEEecCC----------------------Cch-----hhHHHHHHHHHHhCCCceEE-ecccc
Q psy1056 330 ADKNRLKLLSQAG-VDVVILDSSQ----------------------GNS-----IYQIEMIKFIKKEYPDMQVI-GGNVL 380 (590)
Q Consensus 330 ~~~e~~~~li~~g-ad~i~V~~~~----------------------G~~-----~~~l~~i~~i~~~~~~vpvi-~g~v~ 380 (590)
+..+.++.+.++| ++.+.+.... |.+ ...++.++.+++..+++|++ .|+|.
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~ 254 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVY 254 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3445678888999 9998764321 100 11357888888887789998 67888
Q ss_pred CcHHHHHHHHCCCCEEEE
Q psy1056 381 FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 381 s~~~a~~l~~~Gvd~i~v 398 (590)
+.++|.+++.+|||++-+
T Consensus 255 ~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 255 SGEDAFLHILAGASMVQV 272 (314)
T ss_dssp SHHHHHHHHHHTCSSEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 999999999999999844
No 471
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=86.26 E-value=6.5 Score=40.82 Aligned_cols=120 Identities=12% Similarity=-0.002 Sum_probs=78.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC-Cc----------------------hhhHHHHHHHHHHhC-CCceEEeccc--cCc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ-GN----------------------SIYQIEMIKFIKKEY-PDMQVIGGNV--LFG 382 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~-G~----------------------~~~~l~~i~~i~~~~-~~vpvi~g~v--~s~ 382 (590)
+...+.++..++.|...+-+.... +. ....++.++.+|+.+ +++++++.-- -+.
T Consensus 135 e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~ 214 (401)
T 3sbf_A 135 EGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFP 214 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCSCH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCCCCCH
Confidence 455667788888999988776421 10 123477888999887 5788886422 266
Q ss_pred HHHH----HHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEE
Q psy1056 383 YQPR----ATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAM 457 (590)
Q Consensus 383 ~~a~----~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~ 457 (590)
++|. .|.+.|+++| +- . +... ....+ ++..+..++||++++.+.+..|+.+++..| +|.++
T Consensus 215 ~~A~~~~~~L~~~~i~~i----Eq--P---~~~~--~~~~~---~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 280 (401)
T 3sbf_A 215 NQAIQFAKEVEQYKPYFI----ED--I---LPPN--QTEWL---DNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIR 280 (401)
T ss_dssp HHHHHHHHHHGGGCCSCE----EC--S---SCTT--CGGGH---HHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred HHHHHHHHHHHhcCCCEE----EC--C---CChh--HHHHH---HHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEe
Confidence 6664 4455788888 21 1 1100 22223 333345579999999999999999999987 67776
Q ss_pred ECccc
Q psy1056 458 MGSLL 462 (590)
Q Consensus 458 ~g~~l 462 (590)
+-...
T Consensus 281 ~k~~~ 285 (401)
T 3sbf_A 281 CHVSQ 285 (401)
T ss_dssp CCGGG
T ss_pred cCccc
Confidence 65433
No 472
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=86.20 E-value=2.3 Score=43.67 Aligned_cols=65 Identities=22% Similarity=0.352 Sum_probs=49.4
Q ss_pred HHHHHHHHcCCcEEEEecCC--Cc---h----------hhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEE
Q psy1056 333 NRLKLLSQAGVDVVILDSSQ--GN---S----------IYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQI 396 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~--G~---~----------~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i 396 (590)
+.+..+.+.|+|.+.++... |+ . ....+.+..+++.. ++|+++ |++.+++++.+++++|+|+|
T Consensus 156 ~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPViaaGGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 156 EEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVAAGGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc-CceEEEECCCCCHHHHHHHHHcCCCEE
Confidence 44667788999999996532 11 1 23467788888776 789885 66669999999999999999
Q ss_pred EE
Q psy1056 397 EM 398 (590)
Q Consensus 397 ~v 398 (590)
.+
T Consensus 235 ~v 236 (369)
T 3bw2_A 235 QL 236 (369)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 473
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.20 E-value=3.8 Score=41.66 Aligned_cols=69 Identities=16% Similarity=0.032 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 132 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVV 132 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 34567888999999999987766643 12244555555443 36899986554 345566777899999955
No 474
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.18 E-value=4.2 Score=40.54 Aligned_cols=69 Identities=10% Similarity=0.107 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCchh-----hHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNSI-----YQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~~-----~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|... .-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 112 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSA 112 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEe
Confidence 345678889999999999887666431 2244555555443 36899986544 345566777899999955
No 475
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=86.16 E-value=2.5 Score=41.54 Aligned_cols=60 Identities=20% Similarity=0.140 Sum_probs=46.5
Q ss_pred HHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC-CceEEec-cccCcHHHHHHHHCCCCEEEE
Q psy1056 337 LLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP-DMQVIGG-NVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 337 ~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~vpvi~g-~v~s~~~a~~l~~~Gvd~i~v 398 (590)
.-.+.|..++.++.+. .....+.++.+++..+ ++|+++| +|.|.++++++.++|||.|.|
T Consensus 194 ~gad~G~~lV~LD~~~--~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVV 255 (286)
T 3vk5_A 194 VARAFGFHMVYLYSRN--EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGF 255 (286)
T ss_dssp HHHHTTCSEEEEECSS--SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHcCCCEEEEcCCC--CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 3357788999888643 3334688888888874 6899876 566999999999999999955
No 476
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=86.13 E-value=5.1 Score=41.93 Aligned_cols=118 Identities=14% Similarity=0.044 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCC-Cc----------------------hhhHHHHHHHHHHhC-CCceEEecc--ccCc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQ-GN----------------------SIYQIEMIKFIKKEY-PDMQVIGGN--VLFG 382 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~-G~----------------------~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~ 382 (590)
+...+.++..++.|...+-+.... +. ....++.++.+|+.+ |++++++.- .-+.
T Consensus 156 e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~ 235 (422)
T 3tji_A 156 EALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHERLFP 235 (422)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCCCCCH
Confidence 455667788888999998876532 10 123477889999887 578888632 2266
Q ss_pred HHHH----HHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEE
Q psy1056 383 YQPR----ATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAM 457 (590)
Q Consensus 383 ~~a~----~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~ 457 (590)
++|. .|.+.|+++| +- . +... ....+.++++ ..++||++++.+.+..++.+++..| +|.++
T Consensus 236 ~~A~~~~~~Le~~~i~~i----Eq--P---~~~~--d~~~~~~l~~---~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~ 301 (422)
T 3tji_A 236 QQAVQLAKQLEPFQPYFI----ED--I---LPPQ--QSAWLEQVRQ---QSCVPLALGELFNNPAEWHDLIVNRRIDFIR 301 (422)
T ss_dssp HHHHHHHHHHGGGCCSEE----EC--C---SCGG--GGGGHHHHHH---HCCCCEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred HHHHHHHHHHHhhCCCeE----EC--C---CChh--hHHHHHHHHh---hCCCCEEEeCCcCCHHHHHHHHhcCCCCEEe
Confidence 6664 4455788888 21 1 1100 2233334443 4579999999999999999999987 67876
Q ss_pred ECc
Q psy1056 458 MGS 460 (590)
Q Consensus 458 ~g~ 460 (590)
+-.
T Consensus 302 ~k~ 304 (422)
T 3tji_A 302 CHV 304 (422)
T ss_dssp CCG
T ss_pred cCc
Confidence 654
No 477
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=85.97 E-value=1.3 Score=44.08 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCcEEEEecC---------C----------Cch-h----hHHHHHHHHHHhCCCceEEe-ccccCcHHH
Q psy1056 331 DKNRLKLLSQAGVDVVILDSS---------Q----------GNS-I----YQIEMIKFIKKEYPDMQVIG-GNVLFGYQP 385 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~---------~----------G~~-~----~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a 385 (590)
..+.++.+.++|++.+.+... . |.. . ..++.++.+++.. ++|+++ |++.+.+++
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvia~GGI~~~~d~ 256 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQDV 256 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEEECSSCCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEEEECCcCCHHHH
Confidence 346678888999999988320 0 111 0 1257778888776 789885 677799999
Q ss_pred HHHHHCCCCEEEE
Q psy1056 386 RATLLNFIYQIEM 398 (590)
Q Consensus 386 ~~l~~~Gvd~i~v 398 (590)
.+++++|||++-+
T Consensus 257 ~~~l~~GAd~V~v 269 (311)
T 1ep3_A 257 LEMYMAGASAVAV 269 (311)
T ss_dssp HHHHHHTCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999999944
No 478
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=85.90 E-value=6.9 Score=38.29 Aligned_cols=95 Identities=9% Similarity=-0.030 Sum_probs=61.4
Q ss_pred HHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE--cccccccCCCcccccc-chhH-HHHHHHHHhcC-CCcE
Q psy1056 359 IEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM--IKFIKKEYPDMQVIGR-NGTA-VYRVAEYASRR-GVPV 433 (590)
Q Consensus 359 l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v--~~~~~~~~~~~~~~g~-~~~~-l~~~~~~~~~~-~v~i 433 (590)
+..++.+++. +-|+++-++=+.-.|+.+.++|+|+|-+ |...... |..+.+. |.+- +..++..++.. ..||
T Consensus 18 ~~~lr~~~~~--g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~l--G~~dt~~vtldem~~h~~aV~r~~~~~~v 93 (275)
T 3vav_A 18 VPKLQAMREA--GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQ--GQTTTLPVTLDDIAYHTACVARAQPRALI 93 (275)
T ss_dssp HHHHHHHHHH--TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTT--CCSSSTTCCHHHHHHHHHHHHHTCCSSEE
T ss_pred HHHHHHHHHC--CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHc--CCCCCCccCHHHHHHHHHHHHhcCCCCCE
Confidence 4455556665 4567777888999999999999999955 2221111 1333333 4443 33455555554 3889
Q ss_pred Eec---CCCCCHHHHH----HHHHcCCCEEE
Q psy1056 434 IAD---GGVQSVGHVM----KALALGASTAM 457 (590)
Q Consensus 434 ia~---GGi~~~~di~----kalalGA~~v~ 457 (590)
++| ||..++.+++ +.+..||++|-
T Consensus 94 vaD~pfgsY~s~~~a~~~a~rl~kaGa~aVk 124 (275)
T 3vav_A 94 VADLPFGTYGTPADAFASAVKLMRAGAQMVK 124 (275)
T ss_dssp EEECCTTSCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 996 4577888875 45667999993
No 479
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=85.81 E-value=5.6 Score=41.71 Aligned_cols=116 Identities=11% Similarity=0.014 Sum_probs=78.5
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEecc--ccCcHHH----HHHHHCCCCEEEEccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGGN--VLFGYQP----RATLLNFIYQIEMIKF 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g~--v~s~~~a----~~l~~~Gvd~i~v~~~ 401 (590)
+...+.+..+.+.|.+.+-+...+ +....++.++.+++.+ +++++.+.- .-+.++| +.|.+.|+++| +
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~-~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~i----E 261 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD-AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWL----E 261 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCE----E
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE----E
Confidence 445567778888999999887654 3345578889999876 578887642 2255555 45666899888 2
Q ss_pred ccccCCCccccccchhHHHHHHHHHhcCC-CcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 402 IKKEYPDMQVIGRNGTAVYRVAEYASRRG-VPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 402 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~-v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
-- + ....+...++..+..+ +||++++.+.+..++.+++..| +|.|++-
T Consensus 262 qP-----~-----~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 262 EP-----F-----ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp CC-----S-----CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred CC-----C-----CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 11 1 1111223344444557 9999999999999999999887 5666553
No 480
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=85.66 E-value=5.3 Score=39.68 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=62.8
Q ss_pred HHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---ccccccCCCcccccc-chhHH-HHHHHHHhcCCCcEEe
Q psy1056 361 MIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KFIKKEYPDMQVIGR-NGTAV-YRVAEYASRRGVPVIA 435 (590)
Q Consensus 361 ~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~~~~~~~~~~~~g~-~~~~l-~~~~~~~~~~~v~iia 435 (590)
.+..+.+. +-|+.+-++-+.-.|+.+.++|+|+|.++ +..... |..+.+. +.+.+ ..++..+...++|||+
T Consensus 8 ~lr~l~~~--~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~--G~pD~~~vt~~em~~~~~~I~~~~~~Pvia 83 (295)
T 1xg4_A 8 AFRAALTK--ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSL--GLPDLGISTLDDVLTDIRRITDVCSLPLLV 83 (295)
T ss_dssp HHHHHHHH--SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTT--CCCSSSCSCHHHHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHhC--CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhc--CCCCCCCCCHHHHHHHHHHHHhhCCCCEEe
Confidence 34444444 45777778889999999999999999882 222111 2445555 65543 3455565566799999
Q ss_pred cC--CCC-CHHHHHH----HHHcCCCEEEE
Q psy1056 436 DG--GVQ-SVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 436 ~G--Gi~-~~~di~k----alalGA~~v~~ 458 (590)
|. |.. ++.++++ ....||++|-+
T Consensus 84 D~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 84 DADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 76 765 6766654 45679999944
No 481
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.66 E-value=4.1 Score=40.71 Aligned_cols=69 Identities=9% Similarity=0.021 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 115 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMV 115 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34557888889999999987766543 22345566666654 36899986543 345567788899999955
No 482
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=85.58 E-value=3.5 Score=40.86 Aligned_cols=114 Identities=15% Similarity=0.092 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccC------cHHHHHHHHCCCCEEEEccccccc
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLF------GYQPRATLLNFIYQIEMIKFIKKE 405 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s------~~~a~~l~~~Gvd~i~v~~~~~~~ 405 (590)
.+.++.+.+. +|++.|-..+-.. .+.++++... +.||++++..+ ...+..+.+.|-+-|.+--|++..
T Consensus 122 ~~~v~~l~~~-vd~lkIgA~~~~n---~~LLr~va~~--gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y 195 (298)
T 3fs2_A 122 EEQCAAVAPV-VDVLQIPAFLCRQ---TDLLIAAART--GRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSF 195 (298)
T ss_dssp HHHHHHHTTT-CSEEEECGGGTTC---HHHHHHHHHT--TSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEEC
T ss_pred HHHHHHHHhh-CCEEEECccccCC---HHHHHHHHcc--CCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC
Q ss_pred CCCcccccc-chhHHHHHHHHHhcCCCcEEec---------------CCCCCHHHHH--HHHHcCCCEEEE
Q psy1056 406 YPDMQVIGR-NGTAVYRVAEYASRRGVPVIAD---------------GGVQSVGHVM--KALALGASTAMM 458 (590)
Q Consensus 406 ~~~~~~~g~-~~~~l~~~~~~~~~~~v~iia~---------------GGi~~~~di~--kalalGA~~v~~ 458 (590)
++ +...-.......++.++||+.| ||-|.-.-.+ .|.|+|||++++
T Consensus 196 -------~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~I 259 (298)
T 3fs2_A 196 -------GYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFI 259 (298)
T ss_dssp -------SSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEE
T ss_pred -------CCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEE
No 483
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=85.50 E-value=2.3 Score=42.03 Aligned_cols=65 Identities=8% Similarity=0.006 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
.+.+.+.+++|+|++.+|.- ....+.+.++.++..++++++.+-+..++++++.+.+.|||+|.+
T Consensus 204 ~eea~eal~aGaD~I~LDn~--~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isv 268 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF--AVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAV 268 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC--CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECCC--CHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEE
Confidence 46677778899999998874 334556677777776677888887778999999999999999965
No 484
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=85.49 E-value=4.4 Score=37.93 Aligned_cols=115 Identities=18% Similarity=0.158 Sum_probs=66.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEE-eccccCcHHHHHHHHCCCCEEEEcccccccCCCc
Q psy1056 331 DKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVI-GGNVLFGYQPRATLLNFIYQIEMIKFIKKEYPDM 409 (590)
Q Consensus 331 ~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi-~g~v~s~~~a~~l~~~Gvd~i~v~~~~~~~~~~~ 409 (590)
..+..+.+...+.+++.+|..+. .+.++.++. ..|++ +=.+.+.++...+.+..+|++-+.-... . .
T Consensus 65 ~~~i~~~~~~~~ld~vQLHG~e~-----~~~~~~l~~---~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~-~---~ 132 (205)
T 1nsj_A 65 PEKILDVASYVQLNAVQLHGEEP-----IELCRKIAE---RILVIKAVGVSNERDMERALNYREFPILLDTKTP-E---Y 132 (205)
T ss_dssp HHHHHHHHHHHTCSEEEECSCCC-----HHHHHHHHT---TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCS-S---S
T ss_pred HHHHHHHHHhhCCCEEEECCCCC-----HHHHHHHhc---CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCC-C---C
Confidence 34555556667999999975442 234444542 35665 2234455555555455589885521110 1 1
Q ss_pred ccccc--chhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHH-cCCCEEEECccc
Q psy1056 410 QVIGR--NGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALA-LGASTAMMGSLL 462 (590)
Q Consensus 410 ~~~g~--~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kala-lGA~~v~~g~~l 462 (590)
.|.|. ..+.+.. .. ....|+|.+||+ |+..+..|+. +++.+|=+.+-+
T Consensus 133 GGtG~~fdw~~l~~---~~-~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 133 GGSGKTFDWSLILP---YR-DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp SSCCSCCCGGGTGG---GG-GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred CCCCCccCHHHHHh---hh-cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCce
Confidence 12222 1111111 10 124799999999 8999999987 699999887766
No 485
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=85.47 E-value=2.7 Score=42.84 Aligned_cols=66 Identities=18% Similarity=0.172 Sum_probs=47.4
Q ss_pred HHHHHHHHcCCcEEEEecCCCc--------h------------hhHHHHHHHHHHhCCCceEE-eccccCcHHHHHHHHC
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGN--------S------------IYQIEMIKFIKKEYPDMQVI-GGNVLFGYQPRATLLN 391 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~--------~------------~~~l~~i~~i~~~~~~vpvi-~g~v~s~~~a~~l~~~ 391 (590)
+.+..+.++|+|.+.+....|. + ....+.+..+++..+++|++ .|+|.+.+++.+++.+
T Consensus 193 ~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~ 272 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIAL 272 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHc
Confidence 5567788899999988532220 0 11245677777766679988 4788899999999999
Q ss_pred CCCEEEE
Q psy1056 392 FIYQIEM 398 (590)
Q Consensus 392 Gvd~i~v 398 (590)
|||++-+
T Consensus 273 GAd~V~i 279 (349)
T 1p0k_A 273 GASCTGM 279 (349)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999944
No 486
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=85.41 E-value=3.3 Score=41.21 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLC 101 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 34567888999999999887665533 12244555555433 25899986554 345567777899999955
Q ss_pred -cccccccCCCccccccchhHHH-HHHHHHhcCCCcEEe-c----CCCCCHHHHHHHHH
Q psy1056 399 -IKFIKKEYPDMQVIGRNGTAVY-RVAEYASRRGVPVIA-D----GGVQSVGHVMKALA 450 (590)
Q Consensus 399 -~~~~~~~~~~~~~~g~~~~~l~-~~~~~~~~~~v~iia-~----GGi~~~~di~kala 450 (590)
.+.-. ..+...+. -....+...++|||. . .|+.-+.+..+.|+
T Consensus 102 ~~P~y~---------~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (297)
T 2rfg_A 102 VAGYYN---------RPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLA 151 (297)
T ss_dssp CCCTTT---------CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCCC---------CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 21111 11222222 233344445688776 1 35554555555665
No 487
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.39 E-value=2.1 Score=43.65 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHcCCcEEEEecCC--Cc------hhhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCC-CCEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQ--GN------SIYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNF-IYQIE 397 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~--G~------~~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~G-vd~i~ 397 (590)
+..+.++.+.+.|++.+++.... .. .....+.++.+++.+ ++|+++ |.+.++++|.++++.| +|.|-
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVL 316 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEE
Confidence 45667888999999999987411 10 112367788888877 789885 4566999999999999 99983
No 488
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=85.35 E-value=4.8 Score=39.06 Aligned_cols=92 Identities=12% Similarity=-0.038 Sum_probs=60.2
Q ss_pred HHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---ccccccCCCcccccc-chhH-HHHHHHHHhcCCCcEEec
Q psy1056 362 IKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KFIKKEYPDMQVIGR-NGTA-VYRVAEYASRRGVPVIAD 436 (590)
Q Consensus 362 i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~~~~~~~~~~~~g~-~~~~-l~~~~~~~~~~~v~iia~ 436 (590)
++.+++. +-|+++-++-+.-.|+.+.++|+|+|.++ ..... |+.+.+. +.+. +..++..+...++|||+|
T Consensus 12 lr~l~~~--~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~---G~pD~~~vt~~em~~~~~~I~r~~~~pviaD 86 (255)
T 2qiw_A 12 FASDHES--GKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADAT---GSSDGENMNFADYMAVVKKITSAVSIPVSVD 86 (255)
T ss_dssp HHHHHHT--CCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHT---TCCTTTCSCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHhC--CCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhC---CCCCCCCcCHHHHHHHHHHHHhcCCCCEEec
Confidence 4444443 45788778889999999999999999883 22222 2444444 5554 344555555667999996
Q ss_pred C--CCCC--HHHHHHHHHcCCCEEEE
Q psy1056 437 G--GVQS--VGHVMKALALGASTAMM 458 (590)
Q Consensus 437 G--Gi~~--~~di~kalalGA~~v~~ 458 (590)
. |..+ -.-+.+.+..||++|-+
T Consensus 87 ~~~Gyg~~~~~~~~~l~~aGa~gv~i 112 (255)
T 2qiw_A 87 VESGYGLSPADLIAQILEAGAVGINV 112 (255)
T ss_dssp CTTCTTCCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCcCcHHHHHHHHHHHcCCcEEEE
Confidence 5 6543 23344566789999944
No 489
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=85.32 E-value=3.8 Score=40.96 Aligned_cols=69 Identities=10% Similarity=-0.009 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 109 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMA 109 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEE
Confidence 44567888999999999987665543 22244555555443 36899987544 445567788899999955
No 490
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=85.26 E-value=3.7 Score=39.04 Aligned_cols=68 Identities=15% Similarity=0.051 Sum_probs=45.7
Q ss_pred cHHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCH-HHHHHHHHcCCCEEEECc
Q psy1056 382 GYQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSV-GHVMKALALGASTAMMGS 460 (590)
Q Consensus 382 ~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~-~di~kalalGA~~v~~g~ 460 (590)
..-|+.+.++|++++ +|.... +..+..+++.+. + .++..+||+-. .+...|+..|||.+++||
T Consensus 125 ~~~a~~a~~~g~~Gv---V~sat~----------p~e~~~ir~~~~--~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR 188 (222)
T 4dbe_A 125 DYIKNVIREISPKGI---VVGGTK----------LDHITQYRRDFE--K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGR 188 (222)
T ss_dssp HHHHHHHHHHCCSEE---EECTTC----------HHHHHHHHHHCT--T-CEEEECCBSTTSBCTTHHHHHTCSEEEECH
T ss_pred HHHHHHHHHhCCCEE---EECCCC----------HHHHHHHHHhCC--C-CEEEcCCcccCccCHHHHHHcCCCEEEECH
Confidence 456677778999998 444321 122444555543 2 56777899753 256678889999999999
Q ss_pred cccCC
Q psy1056 461 LLAGT 465 (590)
Q Consensus 461 ~l~~~ 465 (590)
++..+
T Consensus 189 ~I~~A 193 (222)
T 4dbe_A 189 SIYNA 193 (222)
T ss_dssp HHHTS
T ss_pred HhcCC
Confidence 99654
No 491
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=85.25 E-value=1.7 Score=44.09 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCcEEEEecCCCc--------h--------------hhHHHHHHHHHHhCCCceEE-eccccCcHHHHHHH
Q psy1056 333 NRLKLLSQAGVDVVILDSSQGN--------S--------------IYQIEMIKFIKKEYPDMQVI-GGNVLFGYQPRATL 389 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~G~--------~--------------~~~l~~i~~i~~~~~~vpvi-~g~v~s~~~a~~l~ 389 (590)
+.+..+.++|+|.+.+....|. + ....+.+..+++..+++||+ .|++.+.+++.+++
T Consensus 196 e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal 275 (332)
T 1vcf_A 196 EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKAL 275 (332)
T ss_dssp HHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHH
Confidence 4466788899999988543331 1 12356778888877678988 58888999999999
Q ss_pred HCCCCEEEE
Q psy1056 390 LNFIYQIEM 398 (590)
Q Consensus 390 ~~Gvd~i~v 398 (590)
.+|||++-+
T Consensus 276 ~~GAd~V~i 284 (332)
T 1vcf_A 276 ALGADLLAV 284 (332)
T ss_dssp HHTCSEEEE
T ss_pred HhCCChHhh
Confidence 999999944
No 492
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=85.03 E-value=4.2 Score=40.17 Aligned_cols=92 Identities=13% Similarity=0.020 Sum_probs=62.7
Q ss_pred HHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEEc---cccc-ccCCCcccccc-chhH-HHHHHHHHhcCCCcEEe
Q psy1056 362 IKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEMI---KFIK-KEYPDMQVIGR-NGTA-VYRVAEYASRRGVPVIA 435 (590)
Q Consensus 362 i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v~---~~~~-~~~~~~~~~g~-~~~~-l~~~~~~~~~~~v~iia 435 (590)
++.+.+. +-|+.+-++-+.-.|+.+.++|+|+|.++ +... .. ..+.+. +.+. +..++..+...++|||+
T Consensus 13 lr~l~~~--~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG---~pD~~~vt~~em~~~~~~I~r~~~~Pvia 87 (287)
T 3b8i_A 13 FRALLDS--SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLA---APDFALITLSEFVEQATRIGRVARLPVIA 87 (287)
T ss_dssp HHHHHHS--SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHS---CCSSSCSCHHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHhC--CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcC---CCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 4444443 45777778889999999999999999882 2211 22 444455 6554 34456666666799999
Q ss_pred cC--CCCCHHHHHH----HHHcCCCEEEE
Q psy1056 436 DG--GVQSVGHVMK----ALALGASTAMM 458 (590)
Q Consensus 436 ~G--Gi~~~~di~k----alalGA~~v~~ 458 (590)
|. |..++.++++ .+..||++|-+
T Consensus 88 D~d~Gyg~~~~~~~~v~~l~~aGa~gv~i 116 (287)
T 3b8i_A 88 DADHGYGNALNVMRTVVELERAGIAALTI 116 (287)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 65 6668777654 45679999954
No 493
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.02 E-value=2 Score=43.34 Aligned_cols=65 Identities=18% Similarity=0.326 Sum_probs=49.6
Q ss_pred HHHHHHHHcCCcEEEEecCC--Cch--hhHHHHHHHHHHhCCCceEEe-ccccCcHHHHHHHHCCCCEEEE
Q psy1056 333 NRLKLLSQAGVDVVILDSSQ--GNS--IYQIEMIKFIKKEYPDMQVIG-GNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 333 e~~~~li~~gad~i~V~~~~--G~~--~~~l~~i~~i~~~~~~vpvi~-g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
+.+..+.+.|+|.+.++... |+. ...++.+..+++.. ++|+++ |++.+.+++.++..+|++++.+
T Consensus 135 ~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~v 204 (326)
T 3bo9_A 135 SLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQM 204 (326)
T ss_dssp HHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEe
Confidence 45566778999999997632 321 23467778888776 788884 7777899999999999999977
No 494
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=85.00 E-value=0.69 Score=43.91 Aligned_cols=67 Identities=15% Similarity=0.065 Sum_probs=44.8
Q ss_pred HHHHHHHHCCCCEEEEcccccccCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCC-HHHHHHHHHcCCCEEEECcc
Q psy1056 383 YQPRATLLNFIYQIEMIKFIKKEYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQS-VGHVMKALALGASTAMMGSL 461 (590)
Q Consensus 383 ~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~-~~di~kalalGA~~v~~g~~ 461 (590)
.-|+.+.++|++++ +|.... +..+..+++.+. + .++.++||+- +.+...|+..|||.+++||+
T Consensus 119 ~~a~~a~~~G~~Gv---V~sat~----------~~e~~~ir~~~~--~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~ 182 (215)
T 3ve9_A 119 YLREVARRVNPKGF---VAPATR----------PSMISRVKGDFP--D-KLVISPGVGTQGAKPGIALCHGADYEIVGRS 182 (215)
T ss_dssp HHHHHHHHHCCSEE---ECCTTS----------HHHHHHHHHHCT--T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCce---eeCCCC----------HHHHHHHHHhCC--C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHH
Confidence 34556667899988 454322 222344555443 3 6888999984 23677788899999999999
Q ss_pred ccCC
Q psy1056 462 LAGT 465 (590)
Q Consensus 462 l~~~ 465 (590)
+..+
T Consensus 183 I~~a 186 (215)
T 3ve9_A 183 VYQS 186 (215)
T ss_dssp HHTS
T ss_pred HcCC
Confidence 9644
No 495
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=84.93 E-value=3.8 Score=40.64 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhCCC-ceEEecccc-----CcHHHHHHHHCCCCEEE
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEYPD-MQVIGGNVL-----FGYQPRATLLNFIYQIE 397 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~~~-vpvi~g~v~-----s~~~a~~l~~~Gvd~i~ 397 (590)
+.....++.+++.|++.+.+..+.|.. +.-.+.++...+...+ +||++|-.. +.+-++.+.++|+|++-
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavl 100 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVL 100 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEE
Q ss_pred E-cccccccCCCccccccchhHHHH-HHHHHhcCCCcEEe
Q psy1056 398 M-IKFIKKEYPDMQVIGRNGTAVYR-VAEYASRRGVPVIA 435 (590)
Q Consensus 398 v-~~~~~~~~~~~~~~g~~~~~l~~-~~~~~~~~~v~iia 435 (590)
+ .+.-.+. +...+.+ ....+...++|||.
T Consensus 101 v~~P~y~~~---------s~~~l~~~f~~ia~a~~lPiil 131 (292)
T 2vc6_A 101 IVSPYYNKP---------TQEGIYQHFKAIDAASTIPIIV 131 (292)
T ss_dssp EECCCSSCC---------CHHHHHHHHHHHHHHCSSCEEE
T ss_pred EcCCCCCCC---------CHHHHHHHHHHHHHhCCCCEEE
No 496
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=84.92 E-value=1.8 Score=41.68 Aligned_cols=143 Identities=15% Similarity=0.145 Sum_probs=69.8
Q ss_pred eEEeEeeccchhHH-HHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCC-Cc--e-EEeccccCcHHHHHH-HHCC
Q psy1056 319 LIVGAAIGTREADK-NRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYP-DM--Q-VIGGNVLFGYQPRAT-LLNF 392 (590)
Q Consensus 319 l~v~a~i~~~~~~~-e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~v--p-vi~g~v~s~~~a~~l-~~~G 392 (590)
+++..-+...+... ..++.+.+.|+|.+.++..-|.. -+...++.+++..+ +. | .+.=.+.|.-....+ .+.|
T Consensus 57 v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~g~~-~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~ 135 (239)
T 1dbt_A 57 LFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKK-MMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELL 135 (239)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHH-HHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSC
T ss_pred EEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcCCHH-HHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhc
Confidence 34444444222222 35667888999999998866532 12345566665410 22 3 222123222112233 2322
Q ss_pred C--CEEEEcccccccCCCcccccc--chhHHHHHHHHHhcCCCcEEecCCCCCHHH----------HHHHHHcCCCEEEE
Q psy1056 393 I--YQIEMIKFIKKEYPDMQVIGR--NGTAVYRVAEYASRRGVPVIADGGVQSVGH----------VMKALALGASTAMM 458 (590)
Q Consensus 393 v--d~i~v~~~~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~v~iia~GGi~~~~d----------i~kalalGA~~v~~ 458 (590)
. +..+.-...++...++.+.|+ ...-+..+++.+. ..+++.+|||+-... ...|+..|||.+++
T Consensus 136 ~~~~~~d~Vl~ma~~~~~~G~~g~v~~~~~i~~lr~~~~--~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVv 213 (239)
T 1dbt_A 136 IEKSLIDTVVHYSKQAEESGLDGVVCSVHEAKAIYQAVS--PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVV 213 (239)
T ss_dssp BCSCHHHHHHHHHHHHHHTTCSEEECCGGGHHHHTTTSC--TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEE
T ss_pred cCCCHHHHHHHHHHHHHHhCCCEEEECHHHHHHHHHhcC--CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEE
Confidence 1 101100001000000111222 2222334443321 367999999986544 46788999999999
Q ss_pred CccccC
Q psy1056 459 GSLLAG 464 (590)
Q Consensus 459 g~~l~~ 464 (590)
||.+..
T Consensus 214 Gr~I~~ 219 (239)
T 1dbt_A 214 GRSITK 219 (239)
T ss_dssp CHHHHT
T ss_pred ChhhcC
Confidence 998854
No 497
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=84.88 E-value=4 Score=40.43 Aligned_cols=69 Identities=14% Similarity=0.055 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHcCCcEEEEecCCCch-----hhHHHHHHHHHHhC-CCceEEecccc-----CcHHHHHHHHCCCCEEEE
Q psy1056 330 ADKNRLKLLSQAGVDVVILDSSQGNS-----IYQIEMIKFIKKEY-PDMQVIGGNVL-----FGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 330 ~~~e~~~~li~~gad~i~V~~~~G~~-----~~~l~~i~~i~~~~-~~vpvi~g~v~-----s~~~a~~l~~~Gvd~i~v 398 (590)
.....++.+++.|++.+.+..+.|.. +.-.+.++...+.. ..+||++|-.. +.+-++.+.++|+|++-+
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 103 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIML 103 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEE
Confidence 44567888999999999987765543 22234555554432 36899986543 345566778899999955
No 498
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=84.88 E-value=1.3 Score=43.95 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhCCCceEEeccccCcHHHHHHHHCCCCEEEE
Q psy1056 332 KNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEYPDMQVIGGNVLFGYQPRATLLNFIYQIEM 398 (590)
Q Consensus 332 ~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~~~vpvi~g~v~s~~~a~~l~~~Gvd~i~v 398 (590)
.+.+.+..++|+|++.++.- ....+.+.++.++..+|.+|+.+-+..+.++++.+.++|||+|.|
T Consensus 203 leea~eA~~aGaD~I~LDn~--~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~Isv 267 (285)
T 1o4u_A 203 LEDALRAVEAGADIVMLDNL--SPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISS 267 (285)
T ss_dssp HHHHHHHHHTTCSEEEEESC--CHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEECCC--CHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 46667778899999998873 334455666777766667888887777999999999999999976
No 499
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=84.83 E-value=8 Score=40.01 Aligned_cols=116 Identities=9% Similarity=0.023 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHHcCCcEEEEecCCCchhhHHHHHHHHHHhC-CCceEEec-cc-cCcHHHH----HHHHCCCCEEEEccc
Q psy1056 329 EADKNRLKLLSQAGVDVVILDSSQGNSIYQIEMIKFIKKEY-PDMQVIGG-NV-LFGYQPR----ATLLNFIYQIEMIKF 401 (590)
Q Consensus 329 ~~~~e~~~~li~~gad~i~V~~~~G~~~~~l~~i~~i~~~~-~~vpvi~g-~v-~s~~~a~----~l~~~Gvd~i~v~~~ 401 (590)
+...+.++.+++.|...+-+.... +...-++.++.+++.+ |++++++. |. -+.++|. .|.+.|+++| +
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~-~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~i----E 231 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGF-DDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWL----E 231 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSS-CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEE----E
T ss_pred HHHHHHHHHHHHcCCCEEEEecCC-CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEE----E
Confidence 345677788888999988887654 3445578899999887 57788763 22 2666654 4556888888 2
Q ss_pred ccccCCCccccccc-hhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEEC
Q psy1056 402 IKKEYPDMQVIGRN-GTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMG 459 (590)
Q Consensus 402 ~~~~~~~~~~~g~~-~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g 459 (590)
- . +... . ...+..++ +..++||.+++.+.+..|+.+++..| +|.+++-
T Consensus 232 e--P---~~~~--d~~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 232 E--P---LRAD--RPAAEWAELA---QAAPMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp C--C---SCTT--SCHHHHHHHH---HHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred C--C---CCcc--chHHHHHHHH---HhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 1 1 1100 1 23333333 34579999999999999999999887 5666554
No 500
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=84.80 E-value=11 Score=38.66 Aligned_cols=116 Identities=7% Similarity=-0.065 Sum_probs=76.2
Q ss_pred HHHHHHHH-cCCcEEEEecCCCchhhHHHHHHHHHHhCC-CceEEec-ccc-CcHHH----HHHHHCCCCEEEEcccccc
Q psy1056 333 NRLKLLSQ-AGVDVVILDSSQGNSIYQIEMIKFIKKEYP-DMQVIGG-NVL-FGYQP----RATLLNFIYQIEMIKFIKK 404 (590)
Q Consensus 333 e~~~~li~-~gad~i~V~~~~G~~~~~l~~i~~i~~~~~-~vpvi~g-~v~-s~~~a----~~l~~~Gvd~i~v~~~~~~ 404 (590)
+.+...++ .|...+-+.....+...-++.++.+++.++ ++++++. |.. +.++| +.|.+.|+++| +-
T Consensus 148 ~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i----Eq-- 221 (370)
T 1chr_A 148 DSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELI----EQ-- 221 (370)
T ss_dssp HHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEE----EC--
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE----EC--
Confidence 33444444 799988877655445556888999999986 4788764 222 55555 45666788877 21
Q ss_pred cCCCccccccchhHHHHHHHHHhcCCCcEEecCCCCCHHHHHHHHHcC-CCEEEECccc
Q psy1056 405 EYPDMQVIGRNGTAVYRVAEYASRRGVPVIADGGVQSVGHVMKALALG-ASTAMMGSLL 462 (590)
Q Consensus 405 ~~~~~~~~g~~~~~l~~~~~~~~~~~v~iia~GGi~~~~di~kalalG-A~~v~~g~~l 462 (590)
. +... ....+..++ ...++||.+++-+.+..|+.+++..| +|.+++-...
T Consensus 222 P---~~~~--~~~~~~~l~---~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 272 (370)
T 1chr_A 222 P---VGRE--NTQALRRLS---DNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCN 272 (370)
T ss_dssp C---SCTT--CHHHHHHHH---HHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTT
T ss_pred C---CCcc--cHHHHHHHH---hhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccc
Confidence 1 1100 222233333 34579999999999999999999886 7888776544
Done!