BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10561
(73 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2
Length = 2731
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 37/43 (86%)
Query: 2 DFSAPDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
D+S P+ N E VGSGERCLPGDEAHCGDGA A+DAKLAYPKG
Sbjct: 1248 DYSQPELNWEAVVGSGERCLPGDEAHCGDGALAKDAKLAYPKG 1290
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2
Length = 3004
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 6 PDYNVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
P N +P VGSG+RC+PGDE +CGDG PA A+L++PKG
Sbjct: 1326 PSINSDPVVGSGQRCIPGDEGNCGDGGPALLARLSHPKG 1364
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNR 49
N E G+G++CLP D++HCGDG A +A L P+G +R
Sbjct: 1281 NFEVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRGITVDR 1321
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A +A L PKG
Sbjct: 1269 NAEVVAGTGEQCLPFDEARCGDGGKAVEATLMSPKG 1304
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A +A L PKG
Sbjct: 1253 NAEVVAGTGEQCLPFDEARCGDGGKAVEATLMSPKG 1288
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNR 49
N E G+G++CLP D++HCGDG A +A L P+G +R
Sbjct: 1275 NFEVVAGTGDQCLPFDQSHCGDGGRASEASLNSPRGITVDR 1315
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A DA L P+G
Sbjct: 1353 NSEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRG 1388
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1
Length = 2705
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
NV+ G+G++CLP D++HCGDG A +A L P+G
Sbjct: 1255 NVDVVAGTGDQCLPFDQSHCGDGGKASEASLNSPRG 1290
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A +A L PKG
Sbjct: 1143 NAEVVAGTGEQCLPFDEARCGDGGKATEALLLGPKG 1178
>sp|Q9WTS5|TEN2_MOUSE Teneurin-2 OS=Mus musculus GN=Tenm2 PE=2 SV=1
Length = 2764
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A DA L P+G
Sbjct: 1315 NSEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRG 1350
>sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=TENM2 PE=1 SV=3
Length = 2774
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A DA L P+G
Sbjct: 1325 NSEVVAGTGEQCLPFDEARCGDGGKAIDATLMSPRG 1360
>sp|Q9R1K2|TEN2_RAT Teneurin-2 OS=Rattus norvegicus GN=Tenm2 PE=1 SV=2
Length = 2774
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+GE+CLP DEA CGDG A DA L P+G
Sbjct: 1325 NSEVVAGTGEQCLPFDEARCGDGGKAVDATLMSPRG 1360
>sp|Q9W7R3|TEN4_DANRE Teneurin-4 OS=Danio rerio GN=tenm4 PE=2 SV=1
Length = 2824
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNR 49
N+E G+G++CLP DE CGDG A +A L P+G ++
Sbjct: 1372 NLELVAGTGDQCLPYDETRCGDGGKAVEATLTNPRGITVDK 1412
>sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Tenm4 PE=1 SV=2
Length = 2771
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKG 44
N E G+G++CLP D+ CGDG A +A L P+G
Sbjct: 1319 NSEVVAGTGDQCLPFDDTRCGDGGKATEATLTNPRG 1354
>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=TENM4 PE=1 SV=2
Length = 2769
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNR 49
N E G+G++CLP D+ CGDG A +A L P+G ++
Sbjct: 1317 NSEVVAGTGDQCLPFDDTRCGDGGKATEATLTNPRGITVDK 1357
>sp|G5EGQ6|TEN1_CAEEL Teneurin-1 OS=Caenorhabditis elegans GN=ten-1 PE=1 SV=1
Length = 2684
Score = 32.3 bits (72), Expect = 0.83, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNR 49
N + G G C ++ CGDGA A++A+L +PKG ++++
Sbjct: 1260 NYDVLAGDGTVCASAVDS-CGDGALAQNAQLIFPKGISFDK 1299
>sp|P04936|POLG_HRV2 Genome polyprotein OS=Human rhinovirus 2 PE=1 SV=3
Length = 2150
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 9 NVEPAVGSGERCLPGDEAHCGDGAPARDAKLAYPKGKNYNRSLCSRVGITVGLHSGGLGF 68
NV V G L G++ AR K +YP Y + ++G +G+H GG G
Sbjct: 1622 NVGDVVSYGNILLSGNQT-------ARMLKYSYPTKSGYCGGVLYKIGQVLGIHVGGNGR 1674
Query: 69 DSW 71
D +
Sbjct: 1675 DGF 1677
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.139 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,648,608
Number of Sequences: 539616
Number of extensions: 1365213
Number of successful extensions: 1860
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1839
Number of HSP's gapped (non-prelim): 21
length of query: 73
length of database: 191,569,459
effective HSP length: 45
effective length of query: 28
effective length of database: 167,286,739
effective search space: 4684028692
effective search space used: 4684028692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)