Query psy10562
Match_columns 135
No_of_seqs 121 out of 458
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 21:35:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qij_A Protein 4.1; cytoskelet 100.0 4.1E-35 1.4E-39 230.9 13.9 113 1-113 184-296 (296)
2 1ef1_A Moesin; membrane, FERM 100.0 3.2E-30 1.1E-34 201.6 12.9 112 1-116 178-292 (294)
3 1h4r_A Merlin; FERM, neurofibr 100.0 1.7E-29 5.9E-34 199.4 13.0 112 1-116 198-312 (314)
4 2i1j_A Moesin; FERM, coiled-co 100.0 5.7E-28 1.9E-32 205.0 13.3 115 1-119 181-298 (575)
5 1mix_A Talin; focal adhesion, 99.8 1.2E-20 4.1E-25 140.2 12.8 105 1-112 94-205 (206)
6 4f7g_A Talin-1; alpha-helix bu 99.8 2.8E-18 9.6E-23 129.5 12.3 107 1-114 105-218 (222)
7 3pvl_A Myosin VIIA isoform 1; 99.7 8.2E-17 2.8E-21 138.4 13.0 102 1-108 454-568 (655)
8 3ivf_A Talin-1; FERM domain, c 99.7 6.4E-16 2.2E-20 124.3 13.0 103 1-110 259-368 (371)
9 3au4_A Myosin-X; protein-prote 99.6 5.6E-15 1.9E-19 124.3 12.4 100 1-107 430-535 (555)
10 4dxa_B KREV interaction trappe 99.6 5.3E-15 1.8E-19 117.1 11.3 102 1-107 199-314 (322)
11 2al6_A Focal adhesion kinase 1 99.6 7E-15 2.4E-19 118.8 11.9 108 1-114 203-323 (375)
12 4eku_A Protein-tyrosine kinase 99.3 1.1E-11 3.7E-16 100.9 12.7 110 1-113 223-339 (392)
13 2j0j_A Focal adhesion kinase 1 98.8 7.9E-08 2.7E-12 82.1 13.2 102 1-107 203-316 (656)
14 4dx8_A Integrin beta-1-binding 93.5 1.4 4.6E-05 31.2 11.9 93 6-105 40-141 (154)
15 2cop_A Acyl-coenzyme A binding 78.7 1.1 3.7E-05 29.8 2.1 24 1-24 70-94 (109)
16 2cqu_A Peroxisomal D3,D2-enoyl 74.1 1.7 5.8E-05 29.2 2.1 19 1-19 78-96 (116)
17 3fp5_A Acyl-COA binding protei 72.0 2.1 7.2E-05 28.3 2.1 18 1-18 70-87 (106)
18 3so6_A LDL receptor adaptor pr 57.7 37 0.0013 22.2 10.5 72 32-104 42-118 (137)
19 1xr0_B FGFR signalling adaptor 37.2 95 0.0033 21.0 11.1 81 33-115 26-107 (129)
20 3dxe_A Amyloid beta A4 protein 35.9 58 0.002 22.2 4.5 69 33-106 45-122 (140)
21 4fxe_A Antitoxin RELB; toxin/a 35.9 24 0.00083 21.7 2.4 17 1-17 24-40 (79)
22 2kuq_A Fibroblast growth facto 34.5 1.2E+02 0.004 21.2 10.9 84 34-119 34-118 (153)
23 1ntv_A Disabled homolog 1; bet 31.6 74 0.0025 21.5 4.6 34 32-68 59-94 (152)
24 4dbb_A Amyloid beta A4 precurs 30.7 1.3E+02 0.0044 20.6 10.3 48 32-79 51-100 (162)
25 1p3r_A Disabled homolog 2; PTB 29.9 87 0.003 21.4 4.7 34 32-68 58-93 (160)
26 1wgu_A APBB2, amyloid beta (A4 27.5 84 0.0029 21.2 4.2 43 34-79 54-104 (136)
27 2kup_A Fibroblast growth facto 26.3 1.6E+02 0.0055 20.3 10.9 83 34-118 34-117 (146)
28 1qqg_A IRS-1, insulin receptor 26.0 2E+02 0.0068 21.2 9.4 72 34-107 178-252 (264)
29 2wl1_A Pyrin, marenostrin; amy 23.6 56 0.0019 23.1 2.8 24 22-45 66-89 (191)
30 2vok_A 52 kDa RO protein; poly 22.4 61 0.0021 22.9 2.8 24 22-45 62-85 (188)
31 2afj_A Gene rich cluster, C9 g 21.1 57 0.002 23.5 2.5 25 22-46 82-109 (226)
32 2fbe_A Predicted: similar to R 21.0 74 0.0025 22.7 3.0 24 22-45 63-86 (201)
33 1h8u_A MBP, eosinophil granule 20.2 1.5E+02 0.0053 17.9 4.2 44 5-60 33-81 (117)
No 1
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=100.00 E-value=4.1e-35 Score=230.95 Aligned_cols=113 Identities=42% Similarity=0.811 Sum_probs=103.6
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCCCeEEEEEeCCeeEEeeCCceeeeeecccccceeeeccEEEEEEecCC
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPEG 80 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~~~lGvs~~GI~iy~~~~~~~~f~W~~I~~l~f~~k~F~I~~~~~~ 80 (135)
|||++||+++||+.|++||+||+++|+|||..|.+++|||++.||.||++..++..|+|++|.+++|++|+|.|++.+.+
T Consensus 184 g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~~~~~~~~LgV~~~Gi~v~~~~~kl~~f~w~~I~~~s~~~k~F~i~~~~~~ 263 (296)
T 3qij_A 184 SMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGE 263 (296)
T ss_dssp SCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTSCEEEEEECSSEEEEEETTEEEEEEEGGGEEEEEEETTEEEEEEC---
T ss_pred CCCHHHHHHHHHHHHhcccccCceEEEEEcCCCCEEEEEECCCeEEEEeCCCeEEEEEhhhcCEEEecCCEEEEEEecCc
Confidence 89999999999999999999999999999999999999999999999999989999999999999999999999998765
Q ss_pred CCcceeeEEEEecChHHHHHHHHHHhhcccccc
Q psy10562 81 YGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFR 113 (135)
Q Consensus 81 ~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~ 113 (135)
.+..+.++.|+++++++||+||++|+|||+|||
T Consensus 264 ~~~~~~~~~f~~~~~~~~k~l~~~c~~~h~ffr 296 (296)
T 3qij_A 264 QEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFR 296 (296)
T ss_dssp ----CEEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred cCCccceEEEECCCHHHHHHHHHHHHHhccccC
Confidence 444467999999999999999999999999997
No 2
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=99.97 E-value=3.2e-30 Score=201.59 Aligned_cols=112 Identities=27% Similarity=0.443 Sum_probs=103.9
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCCCeEEEEEeCCeeEEeeCCcee---eeeecccccceeeeccEEEEEEe
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTKI---NTFSWAKIRKISFKRKRFLIKLH 77 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~~~lGvs~~GI~iy~~~~~~---~~f~W~~I~~l~f~~k~F~I~~~ 77 (135)
|||+++|+.+||+.|++||+||+++|+|+|++|.+++|||++.||.||+++.++ ..|+|++|.+++|++++|.|++.
T Consensus 178 g~s~~~A~~~yL~~~~~lp~yG~~~f~v~~~~g~~~~Lgv~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~~~f~i~~~ 257 (294)
T 1ef1_A 178 GMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPI 257 (294)
T ss_dssp TCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTCCEEEEEEETTEEEEEETTCSSSCSEEEEGGGEEEEEEETTEEEEEES
T ss_pred CCCHHHHHHHHHHHHcccCccCceEEeeecCCCCEEEEEEecCcEEEEeCCCccccceEEEcccceEeeecCCEEEEEEc
Confidence 899999999999999999999999999999999999999999999999877653 69999999999999999999997
Q ss_pred cCCCCcceeeEEEEecChHHHHHHHHHHhhccccccccc
Q psy10562 78 PEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRCSA 116 (135)
Q Consensus 78 ~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~~~~ 116 (135)
+.. +..+.|++++.+.||+||++|+++|+||+..+
T Consensus 258 ~~~----~~~~~f~~~~~~~~k~l~~l~~~~h~f~~~~r 292 (294)
T 1ef1_A 258 DKK----APDFVFYAPRLRINKRILALCMGNHELYMRRR 292 (294)
T ss_dssp SSS----SCCEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCc----cceEEEEeCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 542 35789999999999999999999999999754
No 3
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=99.96 E-value=1.7e-29 Score=199.38 Aligned_cols=112 Identities=26% Similarity=0.494 Sum_probs=103.7
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCCCeEEEEEeCCeeEEeeCCce---eeeeecccccceeeeccEEEEEEe
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTK---INTFSWAKIRKISFKRKRFLIKLH 77 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~~~lGvs~~GI~iy~~~~~---~~~f~W~~I~~l~f~~k~F~I~~~ 77 (135)
|||+++|+++||+.|++||+||+++|+|+|++|.+++|||++.||.||++..+ ...|+|++|.+++|++++|.|++.
T Consensus 198 g~s~~eA~~~yL~~~~~lp~yG~~~f~v~~~~g~~~~LgI~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~~~f~i~~~ 277 (314)
T 1h4r_A 198 GRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPL 277 (314)
T ss_dssp TCCHHHHHHHHHHHHTTSTTTTCEEEEEEETTCCEEEEEECSSEEEEECTTCSSSCSEEEEGGGEEEEEEETTEEEEEES
T ss_pred CCCHHHHHHHHHHHHhccCccCceEEEeecCCCCEEEEEEeCCceEEEeCCCCcccceEEecccceEEEeeCCEEEEEEc
Confidence 89999999999999999999999999999999999999999999999987654 379999999999999999999998
Q ss_pred cCCCCcceeeEEEEecChHHHHHHHHHHhhccccccccc
Q psy10562 78 PEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRCSA 116 (135)
Q Consensus 78 ~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~~~~ 116 (135)
+... ..+.|++++.+.||+||++|+++|+||+..+
T Consensus 278 ~~~~----~~~~f~~~~~~~~k~i~~l~~~~h~f~~~~r 312 (314)
T 1h4r_A 278 DKKI----DVFKFNSSKLRVNKLILQLCIGNHDLFMRRR 312 (314)
T ss_dssp STTS----CCEEEECCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC----ceEEEEcCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 6542 4789999999999999999999999998753
No 4
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=99.95 E-value=5.7e-28 Score=205.03 Aligned_cols=115 Identities=25% Similarity=0.435 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCCCeEEEEEeCCeeEEeeCCce---eeeeecccccceeeeccEEEEEEe
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTK---INTFSWAKIRKISFKRKRFLIKLH 77 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~~~lGvs~~GI~iy~~~~~---~~~f~W~~I~~l~f~~k~F~I~~~ 77 (135)
||||++|+++||+.|++||+||+++|+|+|+.|++++|||++.||.||.++.+ ...|+|++|.+++|++++|.|.+.
T Consensus 181 G~s~~eA~~~yL~~a~~lp~YG~~~F~vkd~~g~~l~LGV~~~GI~v~~~~~k~~~l~~f~w~~I~~isf~~k~F~I~~~ 260 (575)
T 2i1j_A 181 GMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDRKFIIKPI 260 (575)
T ss_dssp TCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTCCEEEEEECSSEEEEEETTCSSSCSEEEEGGGEEEEEEETTEEEEEES
T ss_pred CCCHHHHHHHHHHHHHhccccCCEEEEEEecCCCEEEEEEcCCeeEEEeCCCCcccceEecHHHhhcccCCCCeEEEEEc
Confidence 89999999999999999999999999999999999999999999999987664 368999999999999999999997
Q ss_pred cCCCCcceeeEEEEecChHHHHHHHHHHhhcccccccccccc
Q psy10562 78 PEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRCSAVKN 119 (135)
Q Consensus 78 ~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~~~~~~~ 119 (135)
+.. ...+.|++++.+.||+||++|+++|.||+....++
T Consensus 261 ~~~----~~~l~F~t~~~~~ak~i~~lc~~~H~ff~~~r~~d 298 (575)
T 2i1j_A 261 DKK----APDFVFFAPRVRVNKRILALCMGNHELYMRRRKPD 298 (575)
T ss_dssp CTT----SCCEEEECSCHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred cCC----cceeEEEeCCchhHHHHHHHHHHHHHHHHHccCCC
Confidence 642 35789999999999999999999999998765543
No 5
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=99.85 E-value=1.2e-20 Score=140.17 Aligned_cols=105 Identities=15% Similarity=0.221 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCC-C----CeEEEEEeCCeeEEeeCCce--eeeeecccccceeeeccEEE
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHD-N----ILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFKRKRFL 73 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~-~----~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~~k~F~ 73 (135)
|||+++|+++||+.|++||+||+++|+|++.. | .+++|||++.||.++.+..+ +..|+|++|.++++.+++|.
T Consensus 94 g~s~~~A~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~~~~f~ 173 (206)
T 1mix_A 94 NMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFT 173 (206)
T ss_dssp TCCHHHHHHHHHHHHHHSTTTTCEEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEECSSEEE
T ss_pred CCCHHHHHHHHHHHHHhCcccCceEEEEEEccCCCCCcCcEEEEEcccceEEeCCCCCceeeeeehhHeeecccCCCEEE
Confidence 89999999999999999999999999999875 5 79999999999999987665 46999999999999999999
Q ss_pred EEEecCCCCcceeeEEEEecChHHHHHHHHHHhhccccc
Q psy10562 74 IKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFF 112 (135)
Q Consensus 74 I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff 112 (135)
|++.+... .. |.+.+. .|+.++.+|.+.|..+
T Consensus 174 i~~~~~~~----~~--~~~~t~-~~~~i~~Li~~Yi~~~ 205 (206)
T 1mix_A 174 LDFGDYQD----GY--YSVQTT-EGEQIAQLIAGYIDII 205 (206)
T ss_dssp EECGGGSS----SC--EEEECS-CHHHHHHHHHTTSCCC
T ss_pred EEeCcccc----eE--EEEECC-cHHHHHHHHHHHHHHh
Confidence 99886532 23 444443 4899999999998764
No 6
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=99.77 E-value=2.8e-18 Score=129.47 Aligned_cols=107 Identities=15% Similarity=0.169 Sum_probs=87.2
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCC-C----CeEEEEEeCCeeEEeeCCce--eeeeecccccceeeeccEEE
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHD-N----ILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFKRKRFL 73 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~-~----~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~~k~F~ 73 (135)
|||++||+++||+.|++||+||+++|+|++.. | .+++|||++.||.||.+..+ +..|+|++|.++++.+++|.
T Consensus 105 g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~~tk~~l~~~~~~~I~~~~~~~~~f~ 184 (222)
T 4f7g_A 105 QMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFT 184 (222)
T ss_dssp TCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEECTTTCCEEEEEEGGGCCEEEECSSEEE
T ss_pred CCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEcCCcEEEEcCCCCceeEeccHHHeeeeccCCCEEE
Confidence 89999999999999999999999999998764 3 58999999999999987654 57899999999999999999
Q ss_pred EEEecCCCCcceeeEEEEecChHHHHHHHHHHhhccccccc
Q psy10562 74 IKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRC 114 (135)
Q Consensus 74 I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~~ 114 (135)
|++.+... ..+.|.++ .|+.+-.++..++..+..
T Consensus 185 I~~~~~~~----~~~~~~T~---q~~~I~~Li~~Yi~~~~~ 218 (222)
T 4f7g_A 185 LDFGDYQD----GYYSVQTT---EGEQIAQLIAGYIDIILK 218 (222)
T ss_dssp EECCTTSS----SCEEEECS---CHHHHHHHHHHHHHHTC-
T ss_pred EEECCccc----eEEEEECC---cHHHHHHHHHHHHHHHHH
Confidence 99865422 23444443 467788888877765543
No 7
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=99.71 E-value=8.2e-17 Score=138.36 Aligned_cols=102 Identities=16% Similarity=0.190 Sum_probs=91.6
Q ss_pred CCCHHHHHHHHHHHh-hccCCccceeEeeecCCC-----CeEEEEEeCCeeEEeeCCce-eeeeecccccceeeec----
Q psy10562 1 GQSPAAADLNLLETA-RRCELYGVKLHPAKDHDN-----ILLNLSVAHMGILVFQNQTK-INTFSWAKIRKISFKR---- 69 (135)
Q Consensus 1 G~s~~eAe~~fL~~a-~~L~~YGv~~~~vkd~~~-----~~~~lGvs~~GI~iy~~~~~-~~~f~W~~I~~l~f~~---- 69 (135)
|||+++|+++||+.| ++||+||+++|+|++..| ++++|||+..||.||+...+ +..|+|++|.++++++
T Consensus 454 g~s~~eAk~~yL~~a~~~lp~YG~~fF~vk~~~g~~lp~~~l~LgVn~~GV~v~d~~~k~ll~f~~~eI~~is~~~~~~~ 533 (655)
T 3pvl_A 454 RTDSQKVKEDVVNYARFKWPLLFSRFYEAYKFSGPPLPKSDVIVAVNWTGVYFVDEQEQVLLELSFPEIMAVSSSRGTKM 533 (655)
T ss_dssp SSCHHHHHHHHHHHHHHHCTTTSCEEEEEEEEESSCCSCSEEEEEEETTEEEEECTTCCEEEEEEGGGEEEEEEECCCSS
T ss_pred CCCHHHHHHHHHHHHHHhccccCcEEEEEEecCCCCCCCccEEEEEcCCceEEEcCCCceEEEechhHceEEeccCcccc
Confidence 799999999999999 899999999999998777 68999999999999988766 3589999999999998
Q ss_pred --cEEEEEEecCCCCcceeeEEEEecChHHHHHHHHHHhhc
Q psy10562 70 --KRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVEN 108 (135)
Q Consensus 70 --k~F~I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~ 108 (135)
++|+|...+. ..+.|.+++.+.++.|++.+++-
T Consensus 534 ~~~~ftl~~~~~------~~~~F~T~~a~~I~~LI~~yi~~ 568 (655)
T 3pvl_A 534 MAPSFTLATIKG------DEYTFTSSNAEDIRDLVVTFLEG 568 (655)
T ss_dssp SCCEEEEEETTS------CEEEEECTTHHHHHHHHHHHHHH
T ss_pred cccEEEEEeccC------ceEEEEcCCHHHHHHHHHHHHHH
Confidence 7999986432 46889999999999999998875
No 8
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=99.67 E-value=6.4e-16 Score=124.30 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=83.3
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCC-C----CeEEEEEeCCeeEEeeCCce--eeeeecccccceeeeccEEE
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHD-N----ILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFKRKRFL 73 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~-~----~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~~k~F~ 73 (135)
|||+++|+.+||+.|++||+||+++|+|++.. | .+++|||++.||.||.+..+ +..|+|++|.++++.++.|.
T Consensus 259 g~s~~eA~~~yL~~~~~l~~yG~~~f~vk~~~~g~~~~~~~~LgI~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~f~ 338 (371)
T 3ivf_A 259 QMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFT 338 (371)
T ss_dssp TCCHHHHHHHHHHHHHHSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHhcccccCcEEEEEEEeccCCCCCccEEEEEcCCcEEEEcCCCCceEEeeehhheeeeecCCCEEE
Confidence 89999999999999999999999999998653 3 37999999999999987654 47899999999999999999
Q ss_pred EEEecCCCCcceeeEEEEecChHHHHHHHHHHhhccc
Q psy10562 74 IKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHG 110 (135)
Q Consensus 74 I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~ 110 (135)
|.+.+.. ...+.|.++. |..+-+++.+++.
T Consensus 339 I~~~~~~----~~~~~~~T~~---~~~I~~Li~~Yi~ 368 (371)
T 3ivf_A 339 LDFGDYQ----DGYYSVQTTE---GEQIAQLIAGYID 368 (371)
T ss_dssp EECGGGS----SSCEEEECSC---HHHHHHHHHHHHH
T ss_pred EEECCcc----CcEEEEECCh---HHHHHHHHHHHHH
Confidence 9997543 1355555544 4556666655543
No 9
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=99.61 E-value=5.6e-15 Score=124.34 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=83.4
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCC---CeEEEEEeCCeeEEeeCCce--eeeeeccccccee-eeccEEEE
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDN---ILLNLSVAHMGILVFQNQTK--INTFSWAKIRKIS-FKRKRFLI 74 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~---~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~-f~~k~F~I 74 (135)
|||++||+.+||+.|++||+||+++|+|++++| .+++|||+..||.||.+..+ +..|+|++|.+++ +.++.|.|
T Consensus 430 g~s~~eA~~~yL~~~~~lp~yG~~~F~v~~~~~~~~~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~~f~i 509 (555)
T 3au4_A 430 GMNQEQAMAKYMALIKEWPGYGSTLFDVECKEGGFPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPLANTYKI 509 (555)
T ss_dssp TCCHHHHHHHHHHHHTTSTTTTCEEEEEEEEESSSCSEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCcCceEEEEEecCCCCCceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCCCCCEEEE
Confidence 799999999999999999999999999998766 69999999999999987664 4689999999998 57889999
Q ss_pred EEecCCCCcceeeEEEEecChHHHHHHHHHHhh
Q psy10562 75 KLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVE 107 (135)
Q Consensus 75 ~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve 107 (135)
.+.+ ..+.|.++.......|+...++
T Consensus 510 ~~~~-------~~l~f~T~qa~~i~~LI~~Yi~ 535 (555)
T 3au4_A 510 VVDE-------RELLFETSEVVDVAKLMKAYIS 535 (555)
T ss_dssp EETT-------EEEEEECTTHHHHHHHHHHHHH
T ss_pred EECC-------cEEEEECCCHHHHHHHHHHHHH
Confidence 8762 2477777666655555555544
No 10
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=99.60 E-value=5.3e-15 Score=117.08 Aligned_cols=102 Identities=15% Similarity=0.120 Sum_probs=79.2
Q ss_pred CCCHH--HHHHHHHHHhhccCCccceeEeeec--------CCCCeEEEEEeCCeeEEeeCCce--eeeeeccccc-ceee
Q psy10562 1 GQSPA--AADLNLLETARRCELYGVKLHPAKD--------HDNILLNLSVAHMGILVFQNQTK--INTFSWAKIR-KISF 67 (135)
Q Consensus 1 G~s~~--eAe~~fL~~a~~L~~YGv~~~~vkd--------~~~~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~-~l~f 67 (135)
|||++ +|+++||+.|++||+||+++|.|+. ..+.+++|||+..||.||....+ +..++|.+|. .+++
T Consensus 199 g~s~~~a~a~~~yL~~~~~lp~yG~~~f~v~~~~~~~g~~~~~~~~~LgV~~~Gv~v~~~~tk~~l~~~~~~~isw~~s~ 278 (322)
T 4dxa_B 199 GVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGD 278 (322)
T ss_dssp CCCCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECC-------EEEEEEEECSSEEEEEETTTCCEEEEEETTSEEEEECS
T ss_pred CCChhHHHHHHHHHHHHhcCCCcCeEEEEEEEeccCCCCccCCCeEEEEEccCceEEEcCCCceeeeccccceeEEeecC
Confidence 78764 5799999999999999999999983 23469999999999999987654 4667877776 3447
Q ss_pred eccEEEEEEecCCCCcceeeEEEEecCh-HHHHHHHHHHhh
Q psy10562 68 KRKRFLIKLHPEGYGYYKDIVEFLFDNR-NDCKNFWKKCVE 107 (135)
Q Consensus 68 ~~k~F~I~~~~~~~~~~~~~~~f~~~s~-~~ak~lw~~~ve 107 (135)
.++.|.|.+.+.. ..+.|.++.. +.|+.|-.+|-.
T Consensus 279 ~~~~f~i~~~~~~-----~~~~~~t~q~~~i~~li~~~~~~ 314 (322)
T 4dxa_B 279 TDTCFQIHSMENK-----MSFIVHTKQAGLVVKLLMKLNGQ 314 (322)
T ss_dssp STTEEEEEESSSC-----CEEEEECTTHHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCC-----ccEEEEeCcHHHHHHHHHHHHHH
Confidence 8899999986542 3566777765 678777776643
No 11
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=99.60 E-value=7e-15 Score=118.76 Aligned_cols=108 Identities=7% Similarity=0.065 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCC----CeEEEEEeCCeeEEeeCCc--eeeeeecccccceeee-----c
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDN----ILLNLSVAHMGILVFQNQT--KINTFSWAKIRKISFK-----R 69 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~----~~~~lGvs~~GI~iy~~~~--~~~~f~W~~I~~l~f~-----~ 69 (135)
||++.||+++||+.|++|++||+++|.|++..| ..++||+. .||.++.+.. ....++|++|.++++. .
T Consensus 203 g~s~~eAk~~yL~~~~~l~~yG~~~F~v~~~~~~~~~~~l~lg~~-~GI~~~~~~~~~~~~~~~f~~I~~i~~~~~~~~~ 281 (375)
T 2al6_A 203 NLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPE-EGISYLTDKGANPTHLADFNQVQTIQYSNSEDKD 281 (375)
T ss_dssp TCCHHHHHHHHHHHHTTTCCCSCEEEEEEECSSSCEEEEEEEETT-TEEEEESSTTSCEEEEECGGGEEEEEEECCSSSC
T ss_pred CCCHHHHHHHHHHHHhhcccCCcEEEEEeecCCCCcceEEEEecC-CCEEEEeCCCCceEEEechhHccEEEEEeccccC
Confidence 799999999999999999999999999998765 56777775 4999996533 4578999999999763 2
Q ss_pred --cEEEEEEecCCCCcceeeEEEEecChHHHHHHHHHHhhccccccc
Q psy10562 70 --KRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFRC 114 (135)
Q Consensus 70 --k~F~I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~~ 114 (135)
..|.|.+.+. ...+.|.|++.+.|+.+..++..++..+..
T Consensus 282 ~~~~~~I~v~~~-----~~~~~f~~~t~~~a~~i~~Li~gY~rl~~~ 323 (375)
T 2al6_A 282 RKGMLQLKIAGA-----PEPLTVTAPSLTIAENMADLIDGYCRLVNG 323 (375)
T ss_dssp CCEEEEEEETTC-----SSCEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEECCC-----CCcEEEEeCCHHHHHHHHHHHhhheEEecC
Confidence 3566665543 257889999999999999999888777653
No 12
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=99.35 E-value=1.1e-11 Score=100.94 Aligned_cols=110 Identities=12% Similarity=0.080 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCC--CeEEEEEeCCeeEEeeCCc--eeeeeecccccceeeec---cEEE
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDN--ILLNLSVAHMGILVFQNQT--KINTFSWAKIRKISFKR---KRFL 73 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~--~~~~lGvs~~GI~iy~~~~--~~~~f~W~~I~~l~f~~---k~F~ 73 (135)
|+++.+|++.||+.+++|++||+++|+|++..| .+..|.|++.||.+..+.. ....++|++|.+++... ++..
T Consensus 223 ~ls~~eakl~YL~~l~~Lp~yG~e~F~vk~~s~~~~~~~L~Vg~~GIs~~~~k~~~~~~~~~f~~I~~Is~~~~s~~~~~ 302 (392)
T 4eku_A 223 SLREEECVMKFFNTLAGFANIDQETYRCELIQGWNITVDLVIGPKGIRQLTSQDAKPTCLAEFKQIRSIRCLPLEEGQAV 302 (392)
T ss_dssp TCCHHHHHHHHHHHHTTSSCCSCEEEEEEEESSSCCCEEEEEETTEEEEECSSCSCCEEEECGGGBCCCCEEEETTTEEE
T ss_pred CCCHHHHHHHHHHHHHhhhccCcEEEEEEeccCCcceeEEEEcCCcEEEECCCCCceeEEechHHceEEEEEeccCCceE
Confidence 789999999999999999999999999986433 5667777778999864433 45799999999998754 4556
Q ss_pred EEEecCCCCcceeeEEEEecChHHHHHHHHHHhhcccccc
Q psy10562 74 IKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFFR 113 (135)
Q Consensus 74 I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff~ 113 (135)
+++.-.+. ...+.|.|++.+.|+.++.++..+...+.
T Consensus 303 v~I~~~~~---~~~l~~~~~s~~~A~~~~~LidGY~RL~~ 339 (392)
T 4eku_A 303 LQLGIEGA---PQALSIKTSSLAEAENMADLIDGYCRLQG 339 (392)
T ss_dssp EEECBTTC---SSCEEEEESCHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEECCC---CcceEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 66554432 24788999999999999999877655443
No 13
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.79 E-value=7.9e-08 Score=82.09 Aligned_cols=102 Identities=8% Similarity=0.109 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHHHhhccCCccceeEeeecCCCCe--EEEEEeCC-eeEEeeCCc--eeeeeecccccceeee----c--
Q psy10562 1 GQSPAAADLNLLETARRCELYGVKLHPAKDHDNIL--LNLSVAHM-GILVFQNQT--KINTFSWAKIRKISFK----R-- 69 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~--~~lGvs~~-GI~iy~~~~--~~~~f~W~~I~~l~f~----~-- 69 (135)
|+++.+|+++||+.++.|++||+|.|+|++..|.. +.|.|++. ||....+.. ......|++|..|.+. +
T Consensus 203 ~~~~~~~~lk~l~~l~~~~~yg~e~f~~~~~~g~~~~~~l~vg~~~GI~~~~~~~~~~~~~~~f~~I~~I~~~~~~~~~~ 282 (656)
T 2j0j_A 203 NLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADFNQVQTIQYSNSEDKDR 282 (656)
T ss_dssp TCCHHHHHHHHHHHHGGGCCTTSEEEEEEEESSSEEEEEEEEETTTEEEECCSSSSCCEEEECGGGEEEBCEEECSSSSC
T ss_pred cCCHHHHHHHHHHHhccccccCceEEeeccCCCCcccEEEEECCCCCeEEECCCCCCceecccccceeEEEEeeccccCC
Confidence 58999999999999999999999999999988855 77788886 999874432 3468899999999776 2
Q ss_pred -cEEEEEEecCCCCcceeeEEEEecChHHHHHHHHHHhh
Q psy10562 70 -KRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKKCVE 107 (135)
Q Consensus 70 -k~F~I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ve 107 (135)
+.+.+.+... ...+.+.+++...|..+-.+|-.
T Consensus 283 k~~~~~~~~~~-----~~~l~i~~~s~~~ae~~a~LidG 316 (656)
T 2j0j_A 283 KGMLQLKIAGA-----PEPLTVTAPSLTIAENMADLIDG 316 (656)
T ss_dssp CEEEEEEESSC-----SSCEEEEESSHHHHHHHHHHHHH
T ss_pred cceEEEEeccC-----CcceEEECCCchhhHHHHHhhcc
Confidence 3444444433 24678899999999998888754
No 14
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=93.53 E-value=1.4 Score=31.18 Aligned_cols=93 Identities=10% Similarity=0.101 Sum_probs=63.4
Q ss_pred HHHHHHHHHhhccCCccceeEeeecCCCCeEEEEEeCCeeEEeeCCce--eeeeeccccc-ceeeeccE------EEEEE
Q psy10562 6 AADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTK--INTFSWAKIR-KISFKRKR------FLIKL 76 (135)
Q Consensus 6 eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~-~l~f~~k~------F~I~~ 76 (135)
.-.++||+.||++..-- +...++ ++.++|+..||.|-..+.+ +.+.|=..|. -++|.+.- |.++.
T Consensus 40 ~ell~~ID~aQq~gkLP---~~~~~E---dvi~svSkyGvkl~~~d~~dvl~RipL~~I~~~v~YdDg~g~g~~vla~KT 113 (154)
T 4dx8_A 40 LDLINYIDVAQQDGKLP---FVPPEE---EFIMGVSKYGIKVSTSDQYDVLHRHALYLIIRMVCYDDGLGAGKSLLALKT 113 (154)
T ss_dssp HHHHHHHHHHHHTTSSC---SSCCSC---CEEEEEETTEEEEEETTSCCEEEEEEGGGEEEEEEEECCSSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHhCcCC---CCCCcC---eEEEEEeccCcEEEeccCcccccchhHHHhhhheeeccccccccEEEEEEe
Confidence 34678999999865432 223333 6999999999999854333 4789999999 78886554 34444
Q ss_pred ecCCCCcceeeEEEEecChHHHHHHHHHH
Q psy10562 77 HPEGYGYYKDIVEFLFDNRNDCKNFWKKC 105 (135)
Q Consensus 77 ~~~~~~~~~~~~~f~~~s~~~ak~lw~~~ 105 (135)
.+.... .-....|.|.+...|+.+.+..
T Consensus 114 ~~~~~~-~~~~hv~Qc~s~~~A~~iC~~l 141 (154)
T 4dx8_A 114 TDASNE-EYSLWVYQCNSLEQAQAICKVL 141 (154)
T ss_dssp ECTTSC-CEEEEEEEESSHHHHHHHHHHH
T ss_pred cCCCCc-eEEEEEEEcCCHHHHHHHHHHH
Confidence 433221 1245679999999888887664
No 15
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.71 E-value=1.1 Score=29.81 Aligned_cols=24 Identities=13% Similarity=0.266 Sum_probs=20.3
Q ss_pred CCCHHHHHHHHHHHhhccC-Cccce
Q psy10562 1 GQSPAAADLNLLETARRCE-LYGVK 24 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~-~YGv~ 24 (135)
|||++||...||+.+.+|. .|+..
T Consensus 70 gms~eeAm~~YI~lv~~l~~~~~~~ 94 (109)
T 2cop_A 70 DSSPSQAMQEYIAVVKKLDPGWNPQ 94 (109)
T ss_dssp TCCHHHHHHHHHHHHHHHCTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHHhhhhccc
Confidence 7999999999999998875 56543
No 16
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.06 E-value=1.7 Score=29.23 Aligned_cols=19 Identities=16% Similarity=0.123 Sum_probs=17.8
Q ss_pred CCCHHHHHHHHHHHhhccC
Q psy10562 1 GQSPAAADLNLLETARRCE 19 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L~ 19 (135)
|||++||...||+.+.+|-
T Consensus 78 gms~eeAm~~YI~lv~~l~ 96 (116)
T 2cqu_A 78 SLPKEAARQNYVDLVSSLS 96 (116)
T ss_dssp SCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHc
Confidence 7999999999999999876
No 17
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=71.99 E-value=2.1 Score=28.31 Aligned_cols=18 Identities=22% Similarity=0.159 Sum_probs=16.7
Q ss_pred CCCHHHHHHHHHHHhhcc
Q psy10562 1 GQSPAAADLNLLETARRC 18 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~L 18 (135)
|||+++|...|++.+.+|
T Consensus 70 gmS~eeA~~~YI~~v~~l 87 (106)
T 3fp5_A 70 GTSKEVAYQKYVEKLLEI 87 (106)
T ss_dssp TCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 899999999999999875
No 18
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=57.69 E-value=37 Score=22.23 Aligned_cols=72 Identities=18% Similarity=0.152 Sum_probs=45.8
Q ss_pred CCCeEEEEEeCCeeEEeeCCce--eeeeecccccceeee---ccEEEEEEecCCCCcceeeEEEEecChHHHHHHHHH
Q psy10562 32 DNILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFK---RKRFLIKLHPEGYGYYKDIVEFLFDNRNDCKNFWKK 104 (135)
Q Consensus 32 ~~~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~---~k~F~I~~~~~~~~~~~~~~~f~~~s~~~ak~lw~~ 104 (135)
...++.|-|+..||.+...... +..++-..|.-..-. .+.|.-..++.... .-.-..|.+++++.|+.|-..
T Consensus 42 ~~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~FafI~r~~~~~-~~~CHvF~c~~~~~A~~i~~~ 118 (137)
T 3so6_A 42 KLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNE-SLECHAFLCTKRKVAQAVTLT 118 (137)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTEEEEEEECSSSS-CEEEEEEECSSHHHHHHHHHH
T ss_pred CCCEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCEEEEEEEcCCCC-eEEEEEEEeCCHHHHHHHHHH
Confidence 4678999999999999866543 345654444444332 35777776664321 123457888887777666543
No 19
>1xr0_B FGFR signalling adaptor SNT-1; phosphotyrosine binding domain, PTB, TRK, NPXPY motif,, signaling protein/growth factor receptor complex; NMR {Homo sapiens} SCOP: b.55.1.2
Probab=37.17 E-value=95 Score=20.99 Aligned_cols=81 Identities=9% Similarity=0.173 Sum_probs=61.1
Q ss_pred CCeEEEEEeCCeeEEeeCCceeeeeecccccceeeeccEEEEEEecC-CCCcceeeEEEEecChHHHHHHHHHHhhcccc
Q psy10562 33 NILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPE-GYGYYKDIVEFLFDNRNDCKNFWKKCVENHGF 111 (135)
Q Consensus 33 ~~~~~lGvs~~GI~iy~~~~~~~~f~W~~I~~l~f~~k~F~I~~~~~-~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~F 111 (135)
-.+.+|=|+...|.++.....+..+|+..|.+--+.+..|+.+.-.. +.+ +-...|.+...+.--.+....+..+..
T Consensus 26 ~g~~~L~lt~~~L~L~~~~~~~~~Wp~~~LRrYG~d~~~FsFEaGRRC~tG--eGiF~F~t~~~~~If~~l~~~i~~~s~ 103 (129)
T 1xr0_B 26 LGSGIMELTDTELILYTRKRDSVKWHYLCLRRYGYDSNLFSFESGRRCQTG--QGIFAFKCARAEELFNMLQEIMQNNSI 103 (129)
T ss_dssp CCCEEEEECSSCEEEEETTTEEEEECSTTEEEEEECSSEEEEEECSCSTTC--SEEEEEECSCHHHHHHHHHHHHHHTTC
T ss_pred ceeEEEEEecCEEEEEeCCCCeeEcchHHhhhcCccCCEEEEEcCCCCCCC--CcEEEEEcCCHHHHHHHHHHHHhccCc
Confidence 46788999999999998777777899999999999999999997421 111 236778888877777777777776655
Q ss_pred cccc
Q psy10562 112 FRCS 115 (135)
Q Consensus 112 f~~~ 115 (135)
-..+
T Consensus 104 s~~~ 107 (129)
T 1xr0_B 104 NVVE 107 (129)
T ss_dssp CCEE
T ss_pred cccc
Confidence 4443
No 20
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=35.90 E-value=58 Score=22.20 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=38.2
Q ss_pred CCeEEEEEeCCeeEEeeCCce--e-----eeeecccccceeeeccEEEEEEecCCCCcceeeEEEEec--ChHHHHHHHH
Q psy10562 33 NILLNLSVAHMGILVFQNQTK--I-----NTFSWAKIRKISFKRKRFLIKLHPEGYGYYKDIVEFLFD--NRNDCKNFWK 103 (135)
Q Consensus 33 ~~~~~lGvs~~GI~iy~~~~~--~-----~~f~W~~I~~l~f~~k~F~I~~~~~~~~~~~~~~~f~~~--s~~~ak~lw~ 103 (135)
..++.|-|++.||.|...... + ...+|..+.+ +.|.|..-.... .+. =.--.|.++ ..+.|..+=+
T Consensus 45 ~~~v~l~Vs~~gi~v~~~~t~e~l~~~~i~~ISFcg~~k---d~k~FafI~~~~-~~~-f~CHvF~c~~~A~~vs~aV~~ 119 (140)
T 3dxe_A 45 WTPSHVSVAPATLTILHQQTEAVLGECRVRFLSFLAVGR---DVHTFAFIMAAG-PAS-FCCHMFWCEPNAASLSEAVQA 119 (140)
T ss_dssp CEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECS---STTEEEEEEEEE-TTE-EEEEEEEEESCSHHHHHHHHH
T ss_pred CceEEEEEcCCEEEEEecCCcceeeeccEEEEeeeccCC---CCcEEEEEecCC-Ccc-EEEEEEecCcchHHHHHHHHH
Confidence 467999999999999865332 2 3334444432 567777655543 211 123345553 3445555544
Q ss_pred HHh
Q psy10562 104 KCV 106 (135)
Q Consensus 104 ~~v 106 (135)
.|.
T Consensus 120 Af~ 122 (140)
T 3dxe_A 120 ACM 122 (140)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 21
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=35.86 E-value=24 Score=21.73 Aligned_cols=17 Identities=29% Similarity=0.302 Sum_probs=15.2
Q ss_pred CCCHHHHHHHHHHHhhc
Q psy10562 1 GQSPAAADLNLLETARR 17 (135)
Q Consensus 1 G~s~~eAe~~fL~~a~~ 17 (135)
||++++|...||+.+-.
T Consensus 24 Gl~~s~Ai~~fl~~v~~ 40 (79)
T 4fxe_A 24 GVTPSEALRLMLEYIAD 40 (79)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 89999999999998754
No 22
>2kuq_A Fibroblast growth factor receptor substrate 3, LI residue peptide from ALK tyrosine...; chimera, SNT-2, PTB domain, HALK, structural genomics; NMR {Homo sapiens} PDB: 2yt2_A
Probab=34.52 E-value=1.2e+02 Score=21.20 Aligned_cols=84 Identities=7% Similarity=0.113 Sum_probs=62.9
Q ss_pred CeEEEEEeCCeeEEeeCCceeeeeecccccceeeeccEEEEEEecC-CCCcceeeEEEEecChHHHHHHHHHHhhccccc
Q psy10562 34 ILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPE-GYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFF 112 (135)
Q Consensus 34 ~~~~lGvs~~GI~iy~~~~~~~~f~W~~I~~l~f~~k~F~I~~~~~-~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff 112 (135)
.+.+|=|+...|.++.....+..+|+..|.+--+.+..|.++.-.. +.+ +-...|.+...+.--.+....+.++...
T Consensus 34 G~~~L~lt~~~L~L~~~~~~~~~WPy~~LRRYG~d~~~FsFEaGRRC~tG--eGiF~F~t~~~e~If~~l~~~iq~~si~ 111 (153)
T 2kuq_A 34 GSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTG--QGIFAFKCSRAEEIFNLLQDLMQCNSIN 111 (153)
T ss_dssp EEEEEEECSSCEEEECSSSCCEEECGGGEEEEEEETTEEEEEECTTSTTC--SEEEEEECTTHHHHHHHHHHHHHSSCCC
T ss_pred eeEEEEEcCCEEEEEeCCCCceEccHHHhhhcCccCCEEEEECCCCCCCC--CcEEEEEcCCHHHHHHHHHHHHhcCccc
Confidence 4678888999998886655556677779999999999999998431 111 2477888888888888888888888876
Q ss_pred ccccccc
Q psy10562 113 RCSAVKN 119 (135)
Q Consensus 113 ~~~~~~~ 119 (135)
....|.-
T Consensus 112 ~~~~p~~ 118 (153)
T 2kuq_A 112 VMEEPVI 118 (153)
T ss_dssp CCCCCCC
T ss_pred ccCCCcc
Confidence 6555533
No 23
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=31.64 E-value=74 Score=21.54 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=23.6
Q ss_pred CCCeEEEEEeCCeeEEeeCCce--eeeeecccccceeee
Q psy10562 32 DNILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFK 68 (135)
Q Consensus 32 ~~~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~ 68 (135)
....+.|-||..||.|...... +..++ |.+|+|-
T Consensus 59 ~~~~v~L~IS~~GI~v~d~~tk~~~~~~~---l~~ISf~ 94 (152)
T 1ntv_A 59 HKQKIFLTISFGGIKIFDEKTGALQHHHA---VHEISYI 94 (152)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEEC---GGGEEEE
T ss_pred CCCEEEEEEECCeEEEEECCCCceEeeee---cCcEEEE
Confidence 4568999999999999866543 33443 5555554
No 24
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=30.71 E-value=1.3e+02 Score=20.57 Aligned_cols=48 Identities=13% Similarity=0.075 Sum_probs=35.7
Q ss_pred CCCeEEEEEeCCeeEEeeCCc--eeeeeecccccceeeeccEEEEEEecC
Q psy10562 32 DNILLNLSVAHMGILVFQNQT--KINTFSWAKIRKISFKRKRFLIKLHPE 79 (135)
Q Consensus 32 ~~~~~~lGvs~~GI~iy~~~~--~~~~f~W~~I~~l~f~~k~F~I~~~~~ 79 (135)
....+.|-|+..||.|..... .+..++=.+|.=.+..++.|.-..++.
T Consensus 51 ~~~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a~~~~~f~fIar~~ 100 (162)
T 4dbb_A 51 PMTEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIGNIVVLMARRR 100 (162)
T ss_dssp CCEEEEEEEESSEEEEEETTTCCEEEEEEGGGEEEEEEETTEEEEEEEEC
T ss_pred CCcEEEEEEECCEEEEEECCCCcEEeeeecceeEEEEECCCEEEEEeccC
Confidence 456899999999999986544 346677667766666778888777664
No 25
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=29.87 E-value=87 Score=21.41 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=23.1
Q ss_pred CCCeEEEEEeCCeeEEeeCCce--eeeeecccccceeee
Q psy10562 32 DNILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFK 68 (135)
Q Consensus 32 ~~~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~ 68 (135)
....+.|-||..||.|.....+ +..|+ |.+|+|-
T Consensus 58 ~~~~V~L~IS~~GI~v~d~~tk~~~~~~~---l~~ISfc 93 (160)
T 1p3r_A 58 HKQRIWVNISLSGIKIIDEKTGVIEHEHP---VNKISFI 93 (160)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEEC---GGGEEEE
T ss_pred CCCEEEEEEECCeEEEEECCCCeEEEecc---cCeEEEE
Confidence 3567999999999999976543 34444 4444443
No 26
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=27.47 E-value=84 Score=21.19 Aligned_cols=43 Identities=19% Similarity=0.346 Sum_probs=27.4
Q ss_pred CeEEEEEeCCeeEEeeCCc--e-eeeeecccccceee-----eccEEEEEEecC
Q psy10562 34 ILLNLSVAHMGILVFQNQT--K-INTFSWAKIRKISF-----KRKRFLIKLHPE 79 (135)
Q Consensus 34 ~~~~lGvs~~GI~iy~~~~--~-~~~f~W~~I~~l~f-----~~k~F~I~~~~~ 79 (135)
.++.|-|++.||.|..... . +... .|.+||| +.|.|..-....
T Consensus 54 ~~v~l~Vs~~gi~v~~~~~~~~~l~~~---~l~~ISFc~~d~~~k~FaFI~~~~ 104 (136)
T 1wgu_A 54 PSVNMNVADATVTVISEKNEEEVLVEC---RVRFLSFMGVGKDVHTFAFIMDTG 104 (136)
T ss_dssp CEEEEEEETTEEEEECSSCSSCEEEEE---ETTTEEEEEECSSTTCEEEEEECS
T ss_pred ceEEEEEccCEEEEEecCCCCceeccc---eEEEeeeEecCCCCcEEEEEEcCC
Confidence 6799999999999985432 2 2222 3666666 356666555543
No 27
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A
Probab=26.28 E-value=1.6e+02 Score=20.27 Aligned_cols=83 Identities=7% Similarity=0.126 Sum_probs=61.2
Q ss_pred CeEEEEEeCCeeEEeeCCceeeeeecccccceeeeccEEEEEEecC-CCCcceeeEEEEecChHHHHHHHHHHhhccccc
Q psy10562 34 ILLNLSVAHMGILVFQNQTKINTFSWAKIRKISFKRKRFLIKLHPE-GYGYYKDIVEFLFDNRNDCKNFWKKCVENHGFF 112 (135)
Q Consensus 34 ~~~~lGvs~~GI~iy~~~~~~~~f~W~~I~~l~f~~k~F~I~~~~~-~~~~~~~~~~f~~~s~~~ak~lw~~~ve~H~Ff 112 (135)
.+.+|=|+...|.++.....+..+|+..|.+--+.+..|.++.-.. ..+ +-...|.+...+.--.+....+..+..-
T Consensus 34 G~~~L~Lt~~~L~L~~~~~~~~~WPy~~LRRYG~d~~~FsFEaGRrC~tG--eGiF~F~t~~~e~If~~l~~~iq~~~~~ 111 (146)
T 2kup_A 34 GSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTG--QGIFAFKCSRAEEIFNLLQDLMQCNSIN 111 (146)
T ss_dssp EEEEEEECSSCEEEECSSSCCEEECGGGCSCEEEETTEEEEEECTTSSSC--SEEEEEECTTHHHHHHHHHHHHTTCCTT
T ss_pred eeEEEEEccCEEEEEcCCCCeeEcCHHHhhhcCccCCEEEEEcCCCCCCC--CCEEEEEcCCHHHHHHHHHHHHhcCccc
Confidence 3567778999998886666666777789999999999999997432 111 2367788888887777778888777776
Q ss_pred cccccc
Q psy10562 113 RCSAVK 118 (135)
Q Consensus 113 ~~~~~~ 118 (135)
....+.
T Consensus 112 ~~~~p~ 117 (146)
T 2kup_A 112 VMEEPV 117 (146)
T ss_dssp CSCCCC
T ss_pred cccCCc
Confidence 555443
No 28
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=25.95 E-value=2e+02 Score=21.21 Aligned_cols=72 Identities=14% Similarity=0.165 Sum_probs=51.3
Q ss_pred CeEEEEEeCCeeEEeeCCce--eeeeecccccceeeeccEEEEEEec-CCCCcceeeEEEEecChHHHHHHHHHHhh
Q psy10562 34 ILLNLSVAHMGILVFQNQTK--INTFSWAKIRKISFKRKRFLIKLHP-EGYGYYKDIVEFLFDNRNDCKNFWKKCVE 107 (135)
Q Consensus 34 ~~~~lGvs~~GI~iy~~~~~--~~~f~W~~I~~l~f~~k~F~I~~~~-~~~~~~~~~~~f~~~s~~~ak~lw~~~ve 107 (135)
.+..|=++...|.+...+.+ +..+|...|.+--+.+..|.+++-. ...+ +=.+.|.+++...|+.+.....+
T Consensus 178 G~y~l~l~~~~l~L~~~~~~~~~~~wpl~~lRr~G~~~~~F~fEaGR~c~~G--~G~f~f~t~~~~i~~~i~~~i~~ 252 (264)
T 1qqg_A 178 GIYRLCLTSKTISFVKLNSEAAAVVLQLMNIRRCGHSENFFFIEVGRSAVTG--PGEFWMQVDDSVVAQNMHETILE 252 (264)
T ss_dssp EEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEETTEEEEEECTTSTTC--SEEEEEECSCHHHHHHHHHHHHH
T ss_pred CceEEEEeCcEEEEEecCCCcceEEeehhheecccccCcEEEEEecCCCCCC--CcEEEEecCcHHHHHHHHHHHHH
Confidence 35667777777777655444 3556668899999999999999842 2211 23778888998888888877653
No 29
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=23.62 E-value=56 Score=23.11 Aligned_cols=24 Identities=17% Similarity=0.177 Sum_probs=19.8
Q ss_pred cceeEeeecCCCCeEEEEEeCCee
Q psy10562 22 GVKLHPAKDHDNILLNLSVAHMGI 45 (135)
Q Consensus 22 Gv~~~~vkd~~~~~~~lGvs~~GI 45 (135)
|-|+..|.-.+...+.|||+...|
T Consensus 66 GrHYWEVev~~~~~w~vGV~~~s~ 89 (191)
T 2wl1_A 66 GRRYWEVEVGDKTAWILGACKTSI 89 (191)
T ss_dssp SEEEEEEECTTCSCEEEEEEETTC
T ss_pred CCEEEEEEeCCCCEEEEEEeeCCc
Confidence 788888876777889999998765
No 30
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=22.36 E-value=61 Score=22.92 Aligned_cols=24 Identities=13% Similarity=0.118 Sum_probs=19.6
Q ss_pred cceeEeeecCCCCeEEEEEeCCee
Q psy10562 22 GVKLHPAKDHDNILLNLSVAHMGI 45 (135)
Q Consensus 22 Gv~~~~vkd~~~~~~~lGvs~~GI 45 (135)
|-|+..|.-.+...+.|||+...|
T Consensus 62 GrHYWEVev~~~~~w~vGV~~~si 85 (188)
T 2vok_A 62 GKMYWEVDVTQKEAWDLGVCRDSV 85 (188)
T ss_dssp SEEEEEEECTTCSCEEEEEEETTC
T ss_pred CCeEEEEEecCCceEEEEEeeCCc
Confidence 788888876677789999998765
No 31
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=21.13 E-value=57 Score=23.49 Aligned_cols=25 Identities=12% Similarity=-0.137 Sum_probs=20.0
Q ss_pred cceeEeeecCC---CCeEEEEEeCCeeE
Q psy10562 22 GVKLHPAKDHD---NILLNLSVAHMGIL 46 (135)
Q Consensus 22 Gv~~~~vkd~~---~~~~~lGvs~~GI~ 46 (135)
|.|++.|.=.+ +..+.|||+...+.
T Consensus 82 GrhYWEV~V~~~~~~~~w~vGV~~~s~~ 109 (226)
T 2afj_A 82 GLHAWEISWPLEQRGTHAVVGVATALAP 109 (226)
T ss_dssp SEEEEEEECCCCSSSCCCEEEEEESSCC
T ss_pred CEEEEEEEEeccCCCCCEEEEecCCccc
Confidence 88999886544 67899999998774
No 32
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=20.96 E-value=74 Score=22.74 Aligned_cols=24 Identities=8% Similarity=0.151 Sum_probs=19.6
Q ss_pred cceeEeeecCCCCeEEEEEeCCee
Q psy10562 22 GVKLHPAKDHDNILLNLSVAHMGI 45 (135)
Q Consensus 22 Gv~~~~vkd~~~~~~~lGvs~~GI 45 (135)
|-|+..|.-.+...+.|||+...|
T Consensus 63 GrHYWEVev~~~~~w~vGV~~~si 86 (201)
T 2fbe_A 63 GRHYWEVDVGTSQVWDVGVCKESV 86 (201)
T ss_dssp SEEEEEEECTTCSEEEEEEEETTS
T ss_pred CceEEEEEeCCCCEEEEEEeeCcc
Confidence 788888876677889999998665
No 33
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*
Probab=20.20 E-value=1.5e+02 Score=17.91 Aligned_cols=44 Identities=7% Similarity=-0.039 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhccCCccceeEeeecCCCCeEEEEEeC-----CeeEEeeCCceeeeeecc
Q psy10562 5 AAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAH-----MGILVFQNQTKINTFSWA 60 (135)
Q Consensus 5 ~eAe~~fL~~a~~L~~YGv~~~~vkd~~~~~~~lGvs~-----~GI~iy~~~~~~~~f~W~ 60 (135)
+++|..||...-. . .....+|||+.. .|.....++.++..-.|.
T Consensus 33 s~~e~~~l~~~~~--~----------~~~~~~WIGl~~~~~~~~~~~~W~dg~~~~y~~W~ 81 (117)
T 1h8u_A 33 NFNINYRIQCSVS--A----------LNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWA 81 (117)
T ss_dssp SHHHHHHHHHHHT--T----------CSSSEEEEEEEEECSSSCCEEEETTCCCCCCCCBC
T ss_pred CHHHHHHHHHHHh--c----------cCCCCEEEcccccCCCCCCccEeCCCCcCCccCcC
Confidence 4567777764332 1 124579999964 366666665555445564
Done!