Query psy10566
Match_columns 604
No_of_seqs 1185 out of 2690
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 21:41:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10566.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10566hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.3E-50 8E-55 419.6 40.5 286 294-590 101-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 1.8E-43 6.2E-48 354.9 42.1 291 291-590 22-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 5.8E-43 2E-47 354.5 42.0 290 289-588 43-340 (340)
4 4ery_A WD repeat-containing pr 100.0 3.3E-42 1.1E-46 344.5 41.2 292 291-590 13-311 (312)
5 2ynn_A Coatomer subunit beta'; 100.0 6E-42 2.1E-46 341.3 40.7 290 291-591 3-302 (304)
6 2pbi_B Guanine nucleotide-bind 100.0 6.4E-42 2.2E-46 348.7 40.9 291 289-588 52-354 (354)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.3E-41 7.8E-46 343.4 39.4 299 291-597 5-341 (345)
8 3frx_A Guanine nucleotide-bind 100.0 7E-41 2.4E-45 336.0 41.6 292 292-592 8-318 (319)
9 4g56_B MGC81050 protein; prote 100.0 1E-41 3.5E-46 347.5 33.7 292 297-595 38-347 (357)
10 3iz6_a 40S ribosomal protein R 100.0 6.6E-42 2.2E-46 352.2 31.8 296 291-593 56-377 (380)
11 2xzm_R RACK1; ribosome, transl 100.0 1.2E-40 4E-45 338.0 39.7 295 290-593 10-342 (343)
12 4gqb_B Methylosome protein 50; 100.0 6.2E-41 2.1E-45 339.3 35.9 292 299-598 28-338 (344)
13 1erj_A Transcriptional repress 100.0 6.3E-40 2.1E-44 339.1 38.9 282 299-592 62-390 (393)
14 2hes_X YDR267CP; beta-propelle 100.0 1.9E-39 6.4E-44 327.2 38.0 290 291-591 4-328 (330)
15 1nr0_A Actin interacting prote 100.0 2.1E-39 7.1E-44 354.7 40.0 291 292-593 138-569 (611)
16 4aow_A Guanine nucleotide-bind 100.0 2.6E-38 8.8E-43 319.5 42.9 293 292-593 29-339 (340)
17 2ymu_A WD-40 repeat protein; u 100.0 1E-38 3.6E-43 347.0 42.0 284 290-588 292-577 (577)
18 1nr0_A Actin interacting prote 100.0 1.2E-38 3.9E-43 348.8 40.2 294 291-593 49-357 (611)
19 3ei3_B DNA damage-binding prot 100.0 1.5E-38 5.2E-43 327.4 36.9 292 291-591 63-382 (383)
20 3zwl_B Eukaryotic translation 100.0 1.1E-37 3.8E-42 318.1 40.1 288 292-592 23-347 (369)
21 4e54_B DNA damage-binding prot 100.0 3.2E-38 1.1E-42 330.9 32.4 295 293-594 111-433 (435)
22 1sq9_A Antiviral protein SKI8; 100.0 5.2E-38 1.8E-42 324.7 33.2 291 292-592 7-396 (397)
23 3dm0_A Maltose-binding peripla 100.0 4.1E-37 1.4E-41 342.0 41.4 291 292-591 373-693 (694)
24 2ymu_A WD-40 repeat protein; u 100.0 9.3E-37 3.2E-41 331.6 43.2 285 291-590 252-538 (577)
25 3odt_A Protein DOA1; ubiquitin 100.0 7.4E-37 2.5E-41 304.8 36.8 287 290-594 7-299 (313)
26 2ynn_A Coatomer subunit beta'; 100.0 1.1E-36 3.7E-41 303.3 37.5 251 338-593 4-261 (304)
27 1k8k_C P40, ARP2/3 complex 41 100.0 9.1E-37 3.1E-41 312.2 35.7 290 296-593 3-363 (372)
28 3i2n_A WD repeat-containing pr 100.0 3.5E-37 1.2E-41 313.3 32.3 294 290-593 7-355 (357)
29 1gxr_A ESG1, transducin-like e 100.0 2.6E-36 8.9E-41 304.1 37.8 282 297-589 47-335 (337)
30 3k26_A Polycomb protein EED; W 100.0 7.6E-37 2.6E-41 311.8 33.3 283 296-591 13-366 (366)
31 1r5m_A SIR4-interacting protei 100.0 9.1E-36 3.1E-40 310.1 35.6 278 299-590 106-424 (425)
32 3dwl_C Actin-related protein 2 100.0 3.8E-37 1.3E-41 316.1 24.7 285 296-589 6-377 (377)
33 3gre_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 315.6 32.1 294 291-588 52-437 (437)
34 2pm9_A Protein WEB1, protein t 100.0 1.4E-36 4.6E-41 316.0 28.8 310 273-592 43-415 (416)
35 3ow8_A WD repeat-containing pr 100.0 1.4E-35 4.7E-40 297.5 34.0 264 270-547 53-320 (321)
36 1vyh_C Platelet-activating fac 100.0 1.1E-35 3.9E-40 308.8 33.7 378 84-547 6-410 (410)
37 4a11_B DNA excision repair pro 100.0 4.3E-35 1.5E-39 303.4 37.4 298 292-594 34-368 (408)
38 4gga_A P55CDC, cell division c 100.0 1.6E-34 5.4E-39 301.4 41.7 277 303-593 107-397 (420)
39 1got_B GT-beta; complex (GTP-b 100.0 6.2E-35 2.1E-39 295.4 36.1 263 270-545 72-340 (340)
40 1r5m_A SIR4-interacting protei 100.0 3.8E-35 1.3E-39 305.4 35.3 286 298-593 42-363 (425)
41 2pm9_A Protein WEB1, protein t 100.0 3.5E-36 1.2E-40 312.9 26.2 287 300-594 11-340 (416)
42 4ggc_A P55CDC, cell division c 100.0 7.1E-34 2.4E-38 284.0 41.3 276 304-593 28-317 (318)
43 3mmy_A MRNA export factor; mRN 100.0 8.4E-35 2.9E-39 296.6 35.3 298 287-593 25-348 (368)
44 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-34 4.2E-39 328.1 39.9 292 292-593 4-304 (814)
45 3vl1_A 26S proteasome regulato 100.0 4.8E-35 1.6E-39 304.9 33.1 300 274-591 77-419 (420)
46 2pm7_B Protein transport prote 100.0 1.2E-34 4.3E-39 287.3 34.1 262 294-592 2-286 (297)
47 4h5i_A Guanine nucleotide-exch 100.0 3.2E-35 1.1E-39 300.3 30.0 286 302-594 15-346 (365)
48 4aez_A CDC20, WD repeat-contai 100.0 1.9E-34 6.6E-39 298.8 36.0 284 297-594 87-383 (401)
49 3dw8_B Serine/threonine-protei 100.0 1.9E-34 6.5E-39 302.9 36.2 285 299-590 26-445 (447)
50 3v7d_B Cell division control p 100.0 4.4E-34 1.5E-38 302.0 38.5 284 293-594 113-424 (464)
51 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-34 6.1E-39 291.4 32.8 294 294-594 4-340 (351)
52 3vl1_A 26S proteasome regulato 100.0 4E-35 1.4E-39 305.5 28.2 279 302-593 57-367 (420)
53 1yfq_A Cell cycle arrest prote 100.0 2.9E-34 1E-38 290.1 33.3 285 294-589 4-322 (342)
54 4gqb_B Methylosome protein 50; 100.0 9.3E-34 3.2E-38 286.6 36.7 246 297-550 78-333 (344)
55 1gxr_A ESG1, transducin-like e 100.0 3.2E-34 1.1E-38 288.8 32.9 281 300-593 8-298 (337)
56 1pgu_A Actin interacting prote 100.0 1.4E-33 4.8E-38 308.6 40.6 289 291-591 150-614 (615)
57 3frx_A Guanine nucleotide-bind 100.0 5.6E-34 1.9E-38 285.7 33.1 270 270-549 35-318 (319)
58 3sfz_A APAF-1, apoptotic pepti 100.0 8.1E-34 2.8E-38 336.1 39.5 288 292-591 606-913 (1249)
59 3bg1_A Protein SEC13 homolog; 100.0 2.1E-34 7.1E-39 288.4 28.9 264 295-591 7-293 (316)
60 2xzm_R RACK1; ribosome, transl 100.0 1.4E-33 4.9E-38 285.8 34.6 270 270-549 44-341 (343)
61 2j04_B YDR362CP, TAU91; beta p 100.0 8E-35 2.8E-39 309.5 25.7 314 271-593 179-519 (524)
62 1pgu_A Actin interacting prote 100.0 2.2E-33 7.4E-38 307.1 36.7 287 292-590 54-365 (615)
63 1p22_A F-BOX/WD-repeat protein 100.0 2.3E-33 8E-38 293.9 35.4 275 295-594 127-417 (435)
64 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-32 4E-37 289.5 39.8 276 294-593 111-393 (445)
65 2pbi_B Guanine nucleotide-bind 100.0 3.1E-33 1.1E-37 284.4 34.1 264 270-545 81-354 (354)
66 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.2E-33 1.8E-37 281.8 35.3 274 271-555 34-342 (345)
67 1erj_A Transcriptional repress 100.0 3.7E-33 1.3E-37 288.3 34.0 242 345-593 62-343 (393)
68 4g56_B MGC81050 protein; prote 100.0 7.3E-34 2.5E-38 289.4 27.8 278 305-593 9-303 (357)
69 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-32 6E-37 288.2 39.1 293 274-592 138-443 (445)
70 4ery_A WD repeat-containing pr 100.0 1.5E-32 5.1E-37 274.3 36.1 252 337-593 13-270 (312)
71 3sfz_A APAF-1, apoptotic pepti 100.0 7.2E-33 2.5E-37 328.0 36.9 295 291-593 647-1036(1249)
72 3iz6_a 40S ribosomal protein R 100.0 1.4E-33 4.8E-38 290.0 25.1 251 336-593 55-331 (380)
73 2hes_X YDR267CP; beta-propelle 100.0 2.3E-32 7.7E-37 275.4 33.0 247 337-592 4-281 (330)
74 2oaj_A Protein SNI1; WD40 repe 100.0 1E-32 3.5E-37 313.1 34.0 303 271-589 75-659 (902)
75 3jrp_A Fusion protein of prote 100.0 3.2E-32 1.1E-36 278.8 33.4 254 292-591 2-287 (379)
76 3v7d_B Cell division control p 100.0 9.5E-32 3.3E-36 284.0 35.6 293 272-588 139-460 (464)
77 2oaj_A Protein SNI1; WD40 repe 100.0 3.9E-32 1.3E-36 308.3 33.5 201 297-508 13-247 (902)
78 3dm0_A Maltose-binding peripla 100.0 2.7E-31 9.2E-36 295.1 36.5 270 270-547 400-692 (694)
79 3gre_A Serine/threonine-protei 100.0 2.5E-32 8.4E-37 286.2 26.3 270 308-594 34-362 (437)
80 3vu4_A KMHSV2; beta-propeller 100.0 7.8E-31 2.7E-35 266.8 33.0 282 293-595 11-340 (355)
81 2j04_A TAU60, YPL007P, hypothe 100.0 3.2E-32 1.1E-36 282.4 22.8 259 300-590 14-296 (588)
82 2aq5_A Coronin-1A; WD40 repeat 100.0 4.2E-32 1.4E-36 281.3 23.3 281 303-592 36-343 (402)
83 1sq9_A Antiviral protein SKI8; 100.0 2.9E-31 9.8E-36 274.1 28.4 270 271-550 32-397 (397)
84 4aow_A Guanine nucleotide-bind 100.0 4.1E-30 1.4E-34 259.3 36.2 273 270-550 56-339 (340)
85 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1E-30 3.6E-35 275.0 32.8 284 302-592 5-392 (450)
86 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-30 4.9E-35 294.7 35.7 301 274-592 34-387 (814)
87 4gga_A P55CDC, cell division c 100.0 1.5E-30 5.2E-35 271.2 32.7 278 273-567 123-414 (420)
88 3ei3_B DNA damage-binding prot 100.0 6.4E-31 2.2E-35 270.4 28.8 249 336-593 62-341 (383)
89 3jro_A Fusion protein of prote 100.0 5.4E-31 1.9E-35 294.6 30.4 252 294-593 2-287 (753)
90 4aez_A CDC20, WD repeat-contai 100.0 2.8E-30 9.6E-35 267.5 31.6 252 293-556 125-388 (401)
91 1k8k_C P40, ARP2/3 complex 41 100.0 3.8E-30 1.3E-34 263.0 31.3 241 343-591 4-274 (372)
92 3zwl_B Eukaryotic translation 100.0 2.8E-29 9.5E-34 255.8 37.6 251 335-593 20-306 (369)
93 2j04_B YDR362CP, TAU91; beta p 100.0 3.2E-31 1.1E-35 281.8 23.7 276 290-575 123-458 (524)
94 2xyi_A Probable histone-bindin 100.0 6.5E-30 2.2E-34 267.3 32.4 246 341-592 122-411 (430)
95 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-30 4.9E-35 263.7 25.8 267 307-590 42-332 (343)
96 3dwl_C Actin-related protein 2 100.0 3.5E-31 1.2E-35 271.6 20.5 239 343-590 7-280 (377)
97 1yfq_A Cell cycle arrest prote 100.0 1.1E-29 3.8E-34 256.5 30.2 242 341-593 5-284 (342)
98 4e54_B DNA damage-binding prot 100.0 5.7E-30 2E-34 268.1 28.7 246 342-593 114-389 (435)
99 4h5i_A Guanine nucleotide-exch 100.0 5.9E-30 2E-34 261.3 27.9 247 295-548 67-343 (365)
100 3bws_A Protein LP49; two-domai 100.0 4.1E-29 1.4E-33 261.2 34.4 286 292-591 114-432 (433)
101 3k26_A Polycomb protein EED; W 100.0 2.9E-30 1E-34 262.9 24.7 238 300-548 68-366 (366)
102 3odt_A Protein DOA1; ubiquitin 100.0 6.7E-29 2.3E-33 247.1 32.9 243 336-593 7-257 (313)
103 3i2n_A WD repeat-containing pr 100.0 9.4E-30 3.2E-34 258.3 26.8 245 298-551 62-356 (357)
104 1l0q_A Surface layer protein; 100.0 2.8E-28 9.6E-33 251.2 37.8 266 314-593 3-277 (391)
105 4a11_B DNA excision repair pro 100.0 9.9E-29 3.4E-33 255.5 33.7 281 298-592 96-406 (408)
106 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-29 5.3E-34 261.9 26.2 255 292-551 72-345 (402)
107 3dw8_B Serine/threonine-protei 100.0 4.2E-29 1.4E-33 262.1 28.0 242 346-593 27-375 (447)
108 4ggc_A P55CDC, cell division c 100.0 3.3E-28 1.1E-32 242.8 33.1 262 272-550 42-317 (318)
109 1l0q_A Surface layer protein; 100.0 1.1E-27 3.8E-32 246.8 37.6 289 291-593 22-344 (391)
110 2w18_A PALB2, fancn, partner a 100.0 3.5E-28 1.2E-32 237.2 28.9 285 292-589 26-355 (356)
111 4gq1_A NUP37; propeller, trans 100.0 2.7E-28 9.2E-33 251.7 29.9 280 305-589 19-387 (393)
112 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-29 5.5E-34 262.3 18.4 243 299-580 83-350 (588)
113 2xyi_A Probable histone-bindin 100.0 4.4E-28 1.5E-32 253.4 29.6 250 294-549 121-411 (430)
114 3mmy_A MRNA export factor; mRN 100.0 7E-28 2.4E-32 245.3 30.2 253 336-593 28-306 (368)
115 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-27 4.6E-32 243.0 30.5 241 336-593 8-273 (355)
116 1p22_A F-BOX/WD-repeat protein 100.0 8.6E-28 3E-32 251.6 29.2 257 291-569 163-434 (435)
117 2pm7_B Protein transport prote 100.0 2.7E-27 9.4E-32 234.4 28.8 226 270-503 26-285 (297)
118 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-26 4.5E-31 243.7 31.7 234 348-589 5-337 (450)
119 3bg1_A Protein SEC13 homolog; 100.0 4.5E-27 1.5E-31 235.1 23.6 226 270-503 30-293 (316)
120 3lrv_A PRE-mRNA-splicing facto 100.0 2.6E-27 9E-32 239.6 20.8 227 354-593 43-294 (343)
121 3f3f_A Nucleoporin SEH1; struc 99.9 2E-26 6.9E-31 232.2 25.8 277 272-555 30-344 (351)
122 3bws_A Protein LP49; two-domai 99.9 1.8E-25 6.1E-30 233.5 31.8 285 300-593 59-392 (433)
123 4gq1_A NUP37; propeller, trans 99.9 3.6E-26 1.2E-30 235.8 21.7 243 297-546 85-387 (393)
124 3jrp_A Fusion protein of prote 99.9 8.5E-25 2.9E-29 223.5 30.1 225 274-507 32-291 (379)
125 1nir_A Nitrite reductase; hemo 99.9 1.8E-24 6.3E-29 231.5 33.4 274 308-595 144-462 (543)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-24 4.2E-29 225.7 29.1 282 301-593 62-389 (415)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-24 3.6E-29 226.2 27.2 263 295-570 111-408 (415)
128 2w18_A PALB2, fancn, partner a 99.9 7.8E-25 2.7E-29 213.6 22.8 209 302-546 112-355 (356)
129 1nir_A Nitrite reductase; hemo 99.9 1.4E-23 4.7E-28 224.7 34.7 294 290-593 168-516 (543)
130 3jro_A Fusion protein of prote 99.9 7.5E-25 2.6E-29 244.9 25.0 226 272-506 28-288 (753)
131 2ecf_A Dipeptidyl peptidase IV 99.9 2E-24 6.9E-29 241.7 27.4 279 301-591 36-413 (741)
132 1ri6_A Putative isomerase YBHE 99.9 4.1E-23 1.4E-27 208.0 29.5 269 315-590 7-307 (343)
133 3u4y_A Uncharacterized protein 99.9 1E-22 3.6E-27 204.4 30.3 276 307-593 3-306 (331)
134 2ojh_A Uncharacterized protein 99.9 4.9E-23 1.7E-27 202.4 26.8 252 318-581 17-292 (297)
135 3vgz_A Uncharacterized protein 99.9 1.3E-21 4.5E-26 198.0 33.4 269 300-581 39-334 (353)
136 1pby_B Quinohemoprotein amine 99.9 1.6E-22 5.4E-27 203.2 25.5 265 314-593 2-312 (337)
137 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-22 3.9E-27 226.8 24.1 283 303-592 18-394 (723)
138 1k32_A Tricorn protease; prote 99.9 5.3E-22 1.8E-26 230.1 29.3 288 293-593 44-463 (1045)
139 3o4h_A Acylamino-acid-releasin 99.9 5.8E-22 2E-26 215.3 26.7 273 301-591 21-315 (582)
140 2z3z_A Dipeptidyl aminopeptida 99.9 1.9E-21 6.4E-26 216.4 30.5 277 302-593 82-437 (706)
141 1ri6_A Putative isomerase YBHE 99.9 8E-21 2.7E-25 191.2 32.0 263 299-570 35-333 (343)
142 2ecf_A Dipeptidyl peptidase IV 99.9 7.8E-22 2.7E-26 220.7 26.8 278 303-592 110-460 (741)
143 1k32_A Tricorn protease; prote 99.9 1.4E-21 4.7E-26 226.7 29.0 282 294-591 196-502 (1045)
144 3hfq_A Uncharacterized protein 99.9 4.9E-20 1.7E-24 186.3 35.0 269 321-593 14-321 (347)
145 2z3z_A Dipeptidyl aminopeptida 99.9 2E-21 7E-26 216.1 26.5 275 304-593 28-393 (706)
146 1xfd_A DIP, dipeptidyl aminope 99.9 5.9E-21 2E-25 212.9 28.5 284 292-582 48-432 (723)
147 3u4y_A Uncharacterized protein 99.9 3.5E-20 1.2E-24 185.9 31.2 271 291-570 30-325 (331)
148 1jmx_B Amine dehydrogenase; ox 99.9 1.6E-20 5.6E-25 189.5 26.1 272 306-593 4-327 (349)
149 3pe7_A Oligogalacturonate lyas 99.9 1E-20 3.5E-25 194.4 24.2 293 291-591 20-382 (388)
150 3scy_A Hypothetical bacterial 99.9 2.9E-19 1E-23 181.7 34.4 272 312-590 12-336 (361)
151 3vgz_A Uncharacterized protein 99.9 1.1E-19 3.8E-24 183.7 29.7 243 347-593 40-305 (353)
152 2ojh_A Uncharacterized protein 99.9 3.9E-20 1.3E-24 181.5 25.5 236 294-539 34-293 (297)
153 3hfq_A Uncharacterized protein 99.8 4.2E-19 1.4E-23 179.4 28.8 248 298-552 36-323 (347)
154 3scy_A Hypothetical bacterial 99.8 7.9E-19 2.7E-23 178.5 30.2 262 300-568 48-360 (361)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.5E-19 2.2E-23 179.5 28.5 274 315-592 4-342 (365)
156 1z68_A Fibroblast activation p 99.8 5.1E-20 1.7E-24 205.3 20.2 276 306-591 20-391 (719)
157 1z68_A Fibroblast activation p 99.8 4.6E-19 1.6E-23 197.5 25.7 289 292-593 47-445 (719)
158 1pby_B Quinohemoprotein amine 99.8 2.6E-19 9.1E-24 179.5 21.4 242 303-560 35-322 (337)
159 2oit_A Nucleoporin 214KDA; NH2 99.8 5.2E-18 1.8E-22 176.5 27.8 201 300-504 35-279 (434)
160 3o4h_A Acylamino-acid-releasin 99.8 5.1E-19 1.8E-23 192.1 19.9 231 347-589 21-274 (582)
161 3c5m_A Oligogalacturonate lyas 99.8 2E-18 6.8E-23 177.5 22.0 282 293-590 22-381 (396)
162 3azo_A Aminopeptidase; POP fam 99.8 6.8E-18 2.3E-22 186.2 25.6 290 295-593 17-371 (662)
163 2oit_A Nucleoporin 214KDA; NH2 99.8 3.9E-18 1.3E-22 177.5 20.9 209 372-594 24-281 (434)
164 4a5s_A Dipeptidyl peptidase 4 99.8 4.6E-18 1.6E-22 189.8 20.1 276 303-589 18-396 (740)
165 2oiz_A Aromatic amine dehydrog 99.8 1.1E-16 3.9E-21 162.3 26.8 265 292-571 42-359 (361)
166 1q7f_A NHL, brain tumor CG1071 99.8 8.4E-16 2.9E-20 150.6 31.8 243 298-551 26-283 (286)
167 3fvz_A Peptidyl-glycine alpha- 99.8 2E-16 6.8E-21 158.6 27.5 240 347-592 23-323 (329)
168 2oiz_A Aromatic amine dehydrog 99.8 1.1E-16 3.7E-21 162.5 25.7 262 321-592 29-335 (361)
169 1jmx_B Amine dehydrogenase; ox 99.8 2.3E-16 8E-21 158.9 27.1 242 292-558 32-335 (349)
170 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-16 5.9E-21 161.5 25.9 242 300-549 38-342 (365)
171 2gop_A Trilobed protease; beta 99.8 3E-16 1E-20 158.3 27.4 259 302-590 15-330 (347)
172 2dg1_A DRP35, lactonase; beta 99.7 6.2E-16 2.1E-20 155.1 28.5 267 302-580 6-300 (333)
173 1q7f_A NHL, brain tumor CG1071 99.7 3.2E-15 1.1E-19 146.3 31.8 240 345-592 27-281 (286)
174 3fvz_A Peptidyl-glycine alpha- 99.7 9.1E-16 3.1E-20 153.7 26.7 241 301-548 23-322 (329)
175 4a5s_A Dipeptidyl peptidase 4 99.7 1.5E-15 5.3E-20 169.4 28.7 288 292-592 47-450 (740)
176 3pe7_A Oligogalacturonate lyas 99.7 1.1E-15 3.7E-20 156.6 23.9 255 336-593 19-331 (388)
177 2z2n_A Virginiamycin B lyase; 99.7 2.6E-13 9E-18 133.2 38.1 281 297-592 10-296 (299)
178 2xdw_A Prolyl endopeptidase; a 99.7 1.1E-14 3.8E-19 161.7 31.5 244 346-593 123-416 (710)
179 2xdw_A Prolyl endopeptidase; a 99.7 9.1E-15 3.1E-19 162.4 28.0 243 299-550 122-416 (710)
180 3no2_A Uncharacterized protein 99.7 2.7E-14 9.3E-19 138.8 27.7 245 312-566 4-272 (276)
181 3azo_A Aminopeptidase; POP fam 99.7 6.8E-15 2.3E-19 162.1 24.3 241 342-590 18-322 (662)
182 2bkl_A Prolyl endopeptidase; m 99.7 5.6E-15 1.9E-19 163.6 23.0 277 311-593 77-399 (695)
183 3e5z_A Putative gluconolactona 99.7 8.5E-14 2.9E-18 137.0 29.1 245 292-551 18-289 (296)
184 3c5m_A Oligogalacturonate lyas 99.7 2.5E-15 8.5E-20 154.2 18.3 249 338-593 21-331 (396)
185 2bkl_A Prolyl endopeptidase; m 99.6 1.1E-14 3.6E-19 161.4 22.7 248 299-558 118-406 (695)
186 3e5z_A Putative gluconolactona 99.6 8.9E-14 3.1E-18 136.8 26.8 238 341-593 21-288 (296)
187 3dsm_A Uncharacterized protein 99.6 7.6E-14 2.6E-18 139.5 26.5 257 321-593 15-303 (328)
188 2gop_A Trilobed protease; beta 99.6 9.5E-14 3.2E-18 139.8 27.4 234 302-561 59-342 (347)
189 1qks_A Cytochrome CD1 nitrite 99.6 3.6E-13 1.2E-17 143.7 32.3 270 311-592 165-478 (567)
190 1qks_A Cytochrome CD1 nitrite 99.6 6.3E-13 2.2E-17 141.8 34.0 295 291-593 187-540 (567)
191 2dg1_A DRP35, lactonase; beta 99.6 3.8E-13 1.3E-17 134.6 30.6 241 291-538 34-300 (333)
192 1rwi_B Serine/threonine-protei 99.6 2.3E-13 7.7E-18 131.8 26.4 237 349-593 25-266 (270)
193 2qc5_A Streptogramin B lactona 99.6 4.8E-12 1.6E-16 124.2 36.2 276 299-590 17-299 (300)
194 3no2_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 130.2 27.3 210 358-578 4-230 (276)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-12 3.7E-17 130.0 30.1 244 346-597 16-305 (314)
196 1yr2_A Prolyl oligopeptidase; 99.6 3.3E-13 1.1E-17 150.5 26.8 276 311-593 116-443 (741)
197 1rwi_B Serine/threonine-protei 99.6 5.7E-13 1.9E-17 128.9 25.0 238 303-551 25-267 (270)
198 2mad_H Methylamine dehydrogena 99.6 1.3E-11 4.6E-16 125.1 34.9 274 308-594 27-353 (373)
199 3dsm_A Uncharacterized protein 99.5 3.1E-12 1.1E-16 127.8 26.7 249 302-567 44-319 (328)
200 3sjl_D Methylamine dehydrogena 99.5 7E-12 2.4E-16 125.6 28.7 274 308-593 39-365 (386)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 8.8E-12 3E-16 123.4 28.6 242 298-548 14-299 (314)
202 2z2n_A Virginiamycin B lyase; 99.5 4.1E-11 1.4E-15 117.4 32.9 237 343-590 10-254 (299)
203 2mad_H Methylamine dehydrogena 99.5 9.8E-11 3.4E-15 118.7 34.1 248 292-555 58-357 (373)
204 1yr2_A Prolyl oligopeptidase; 99.5 1.9E-12 6.5E-17 144.3 23.5 247 299-556 160-448 (741)
205 3g4e_A Regucalcin; six bladed 99.5 1.2E-10 4.2E-15 114.3 32.3 226 346-580 11-262 (297)
206 3sjl_D Methylamine dehydrogena 99.5 4.2E-11 1.4E-15 120.0 28.5 264 291-570 69-384 (386)
207 3c75_H MADH, methylamine dehyd 99.4 4.3E-11 1.5E-15 122.1 27.3 274 311-593 82-404 (426)
208 3hrp_A Uncharacterized protein 99.4 1E-10 3.6E-15 120.2 29.6 233 348-589 131-408 (409)
209 2ghs_A AGR_C_1268P; regucalcin 99.4 5.8E-10 2E-14 111.1 33.2 223 350-581 51-293 (326)
210 2qc5_A Streptogramin B lactona 99.4 9.6E-10 3.3E-14 107.6 33.4 237 344-590 16-259 (300)
211 3dr2_A Exported gluconolactona 99.4 1.4E-10 4.6E-15 114.5 25.1 232 342-586 39-302 (305)
212 3hrp_A Uncharacterized protein 99.4 2.4E-10 8.3E-15 117.5 27.7 237 302-546 131-408 (409)
213 3c75_H MADH, methylamine dehyd 99.4 1.2E-10 4.1E-15 118.8 24.9 250 291-555 109-409 (426)
214 3g4e_A Regucalcin; six bladed 99.4 6.3E-10 2.1E-14 109.3 29.0 229 297-537 8-261 (297)
215 3iuj_A Prolyl endopeptidase; h 99.3 8.2E-11 2.8E-15 129.9 24.4 242 298-551 125-408 (693)
216 2qe8_A Uncharacterized protein 99.3 1E-10 3.5E-15 117.5 22.2 266 302-588 17-318 (343)
217 3iuj_A Prolyl endopeptidase; h 99.3 3.3E-10 1.1E-14 125.1 25.5 238 346-593 127-407 (693)
218 3dr2_A Exported gluconolactona 99.3 5.2E-10 1.8E-14 110.3 23.9 237 292-545 35-303 (305)
219 2ghs_A AGR_C_1268P; regucalcin 99.3 4.8E-09 1.6E-13 104.4 30.5 220 303-537 50-291 (326)
220 1xip_A Nucleoporin NUP159; bet 99.3 1.8E-10 6.3E-15 115.8 18.3 174 303-490 39-231 (388)
221 1mda_H Methylamine dehydrogena 99.2 3.1E-10 1E-14 113.9 19.4 254 324-593 47-348 (368)
222 1xip_A Nucleoporin NUP159; bet 99.2 1.2E-09 4.2E-14 109.8 20.8 168 393-578 38-231 (388)
223 1mda_H Methylamine dehydrogena 99.2 1.5E-09 5E-14 109.0 20.9 255 291-569 56-366 (368)
224 3q7m_A Lipoprotein YFGL, BAMB; 99.1 4.4E-08 1.5E-12 99.5 27.9 261 313-593 53-339 (376)
225 1yiq_A Quinohemoprotein alcoho 99.1 1.3E-08 4.5E-13 111.6 25.5 259 313-580 121-538 (689)
226 1kb0_A Quinohemoprotein alcoho 99.1 1.2E-08 3.9E-13 111.9 23.3 271 313-594 77-510 (677)
227 1yiq_A Quinohemoprotein alcoho 99.1 1.6E-08 5.4E-13 111.0 23.8 270 313-593 70-507 (689)
228 2hz6_A Endoplasmic reticulum t 99.1 1.9E-10 6.5E-15 116.6 7.7 199 358-570 8-214 (369)
229 1npe_A Nidogen, entactin; glyc 99.0 5E-07 1.7E-11 86.8 31.1 249 314-570 2-261 (267)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.0 7.8E-08 2.7E-12 97.6 25.6 257 312-588 102-375 (376)
231 1kb0_A Quinohemoprotein alcoho 99.0 3E-08 1E-12 108.6 23.3 269 312-590 127-566 (677)
232 2ece_A 462AA long hypothetical 99.0 1.4E-07 4.8E-12 95.1 25.8 227 309-536 89-399 (462)
233 2qe8_A Uncharacterized protein 99.0 2E-08 6.7E-13 100.7 18.9 227 298-544 63-317 (343)
234 2ece_A 462AA long hypothetical 99.0 6.7E-07 2.3E-11 90.2 28.8 222 355-579 89-399 (462)
235 2hz6_A Endoplasmic reticulum t 99.0 4E-10 1.4E-14 114.3 5.4 258 312-590 8-278 (369)
236 2iwa_A Glutamine cyclotransfer 99.0 1.3E-07 4.3E-12 89.7 22.2 208 382-593 10-239 (266)
237 1fwx_A Nitrous oxide reductase 98.9 7.3E-08 2.5E-12 100.6 22.0 230 358-593 100-433 (595)
238 3hxj_A Pyrrolo-quinoline quino 98.9 2.7E-08 9.1E-13 98.8 18.2 268 299-594 57-327 (330)
239 2fp8_A Strictosidine synthase; 98.9 9.7E-07 3.3E-11 87.4 28.7 237 348-593 19-315 (322)
240 1fwx_A Nitrous oxide reductase 98.9 5.2E-07 1.8E-11 94.2 26.3 233 311-550 99-433 (595)
241 4a2l_A BT_4663, two-component 98.9 5.4E-06 1.9E-10 92.9 35.0 275 304-592 175-481 (795)
242 2fp8_A Strictosidine synthase; 98.8 1.3E-06 4.3E-11 86.5 26.5 239 302-548 19-313 (322)
243 3nol_A Glutamine cyclotransfer 98.8 3.2E-07 1.1E-11 85.8 19.9 193 383-579 33-244 (262)
244 1npe_A Nidogen, entactin; glyc 98.8 3.5E-06 1.2E-10 80.8 27.4 203 302-512 36-247 (267)
245 1kv9_A Type II quinohemoprotei 98.8 6.7E-07 2.3E-11 97.8 23.2 271 313-593 66-490 (668)
246 2p4o_A Hypothetical protein; p 98.8 1.1E-05 3.8E-10 79.1 29.9 207 290-506 21-244 (306)
247 4a2l_A BT_4663, two-component 98.8 3E-05 1E-09 86.9 37.0 274 301-592 309-615 (795)
248 2iwa_A Glutamine cyclotransfer 98.7 2.7E-06 9.4E-11 80.5 23.7 210 336-549 8-238 (266)
249 3nok_A Glutaminyl cyclase; bet 98.7 1.2E-06 4E-11 82.0 20.4 193 382-579 44-254 (268)
250 3hxj_A Pyrrolo-quinoline quino 98.7 5.3E-08 1.8E-12 96.6 12.2 255 307-589 25-282 (330)
251 3mbr_X Glutamine cyclotransfer 98.7 5.2E-06 1.8E-10 77.0 23.9 192 382-579 10-223 (243)
252 1k3i_A Galactose oxidase precu 98.7 4E-07 1.4E-11 99.6 19.4 269 306-580 190-530 (656)
253 1kv9_A Type II quinohemoprotei 98.7 8.5E-06 2.9E-10 89.0 27.8 259 313-579 117-520 (668)
254 3v64_C Agrin; beta propeller, 98.6 0.0001 3.4E-09 73.6 32.5 255 300-567 32-294 (349)
255 3v9f_A Two-component system se 98.6 9E-05 3.1E-09 82.8 34.9 276 302-592 211-525 (781)
256 1w6s_A Methanol dehydrogenase 98.6 1.4E-05 4.8E-10 85.5 25.3 271 313-593 62-505 (599)
257 3nol_A Glutamine cyclotransfer 98.6 9.6E-06 3.3E-10 75.9 21.0 193 339-537 33-244 (262)
258 2ad6_A Methanol dehydrogenase 98.6 1.6E-05 5.6E-10 84.9 25.7 258 313-581 115-528 (571)
259 2ad6_A Methanol dehydrogenase 98.5 7.3E-06 2.5E-10 87.7 22.7 229 359-593 115-496 (571)
260 2p4o_A Hypothetical protein; p 98.5 0.00017 5.9E-09 70.4 30.9 230 337-579 22-277 (306)
261 3v9f_A Two-component system se 98.5 0.00015 5E-09 81.1 33.3 277 300-592 311-612 (781)
262 3tc9_A Hypothetical hydrolase; 98.5 4.5E-05 1.5E-09 78.5 26.8 236 349-590 138-429 (430)
263 3p5b_L Low density lipoprotein 98.5 0.00026 9E-09 72.0 31.9 241 315-567 85-339 (400)
264 2xe4_A Oligopeptidase B; hydro 98.5 8.7E-05 3E-09 82.3 30.5 252 299-593 170-460 (751)
265 1ijq_A LDL receptor, low-densi 98.5 0.00031 1.1E-08 68.9 31.2 229 316-557 4-247 (316)
266 3v65_B Low-density lipoprotein 98.5 0.00013 4.5E-09 73.9 29.1 252 303-567 78-337 (386)
267 1w6s_A Methanol dehydrogenase 98.4 4E-05 1.4E-09 82.0 24.7 262 307-579 111-535 (599)
268 3mbr_X Glutamine cyclotransfer 98.4 5.3E-05 1.8E-09 70.2 22.1 170 337-511 9-187 (243)
269 3nok_A Glutaminyl cyclase; bet 98.4 2.9E-05 9.9E-10 72.6 20.3 184 292-492 44-254 (268)
270 1flg_A Protein (quinoprotein e 98.4 0.0001 3.5E-09 78.9 27.4 260 313-580 117-549 (582)
271 2xbg_A YCF48-like protein; pho 98.4 0.0014 4.9E-08 64.5 32.4 273 302-589 36-320 (327)
272 3sov_A LRP-6, low-density lipo 98.3 0.00021 7.2E-09 70.2 25.4 228 322-558 12-248 (318)
273 1flg_A Protein (quinoprotein e 98.3 0.00012 4.1E-09 78.3 24.9 230 359-593 117-518 (582)
274 3v64_C Agrin; beta propeller, 98.3 0.0011 3.9E-08 65.9 30.5 233 350-593 36-277 (349)
275 3v65_B Low-density lipoprotein 98.3 0.00065 2.2E-08 68.7 28.8 232 351-593 80-320 (386)
276 1ijq_A LDL receptor, low-densi 98.3 0.0017 5.7E-08 63.7 30.8 221 361-593 3-240 (316)
277 3qqz_A Putative uncharacterize 98.3 0.00056 1.9E-08 64.2 25.7 203 341-547 20-252 (255)
278 3kya_A Putative phosphatase; s 98.3 0.00044 1.5E-08 71.4 26.9 241 350-593 141-477 (496)
279 1k3i_A Galactose oxidase precu 98.3 2.2E-05 7.7E-10 85.7 18.1 242 351-593 189-499 (656)
280 3qqz_A Putative uncharacterize 98.2 0.00062 2.1E-08 63.9 24.6 197 295-501 20-251 (255)
281 3p5b_L Low density lipoprotein 98.2 0.0026 8.9E-08 64.6 30.9 212 300-514 110-331 (400)
282 4hw6_A Hypothetical protein, I 98.2 0.00027 9.4E-09 72.6 23.8 235 349-590 140-432 (433)
283 2xe4_A Oligopeptidase B; hydro 98.1 0.00017 5.8E-09 79.9 22.4 189 394-588 175-395 (751)
284 3tc9_A Hypothetical hydrolase; 98.1 0.00062 2.1E-08 69.9 24.0 153 303-462 138-301 (430)
285 3m0c_C LDL receptor, low-densi 98.1 0.0025 8.4E-08 70.3 29.9 224 322-556 403-640 (791)
286 3sov_A LRP-6, low-density lipo 98.1 0.0013 4.6E-08 64.4 24.4 223 361-594 6-241 (318)
287 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0088 3E-07 64.4 32.7 231 315-556 8-245 (628)
288 3amr_A 3-phytase; beta-propell 98.0 0.0007 2.4E-08 66.0 21.0 184 403-590 39-262 (355)
289 2ism_A Putative oxidoreductase 98.0 0.0057 1.9E-07 60.9 28.2 198 301-504 30-298 (352)
290 3a9g_A Putative uncharacterize 98.0 0.0081 2.8E-07 59.7 28.7 199 301-504 28-297 (354)
291 3ei3_A DNA damage-binding prot 98.0 0.015 5.2E-07 66.9 34.6 284 301-593 553-915 (1158)
292 3sre_A PON1, serum paraoxonase 98.0 0.0019 6.6E-08 63.8 23.7 197 303-501 51-296 (355)
293 3m0c_C LDL receptor, low-densi 97.9 0.0066 2.3E-07 66.9 29.7 209 300-511 422-640 (791)
294 4hw6_A Hypothetical protein, I 97.9 0.0014 4.7E-08 67.4 22.9 201 302-511 139-380 (433)
295 2xbg_A YCF48-like protein; pho 97.9 0.0047 1.6E-07 60.7 25.4 231 301-546 79-320 (327)
296 3s94_A LRP-6, low-density lipo 97.9 0.034 1.2E-06 59.7 33.5 282 302-592 84-424 (619)
297 3s94_A LRP-6, low-density lipo 97.9 0.0062 2.1E-07 65.4 27.2 225 322-555 17-250 (619)
298 2p9w_A MAL S 1 allergenic prot 97.8 0.0039 1.3E-07 60.3 22.7 196 304-502 15-264 (334)
299 2ism_A Putative oxidoreductase 97.8 0.012 4.3E-07 58.3 27.5 221 348-579 31-333 (352)
300 3amr_A 3-phytase; beta-propell 97.8 0.0055 1.9E-07 59.7 22.7 191 359-556 40-272 (355)
301 4a0p_A LRP6, LRP-6, low-densit 97.8 0.028 9.7E-07 60.4 30.4 224 361-594 8-240 (628)
302 3kya_A Putative phosphatase; s 97.7 0.0049 1.7E-07 63.6 23.1 204 303-512 140-417 (496)
303 2xzh_A Clathrin heavy chain 1; 97.7 0.034 1.1E-06 53.3 33.2 253 323-591 49-332 (365)
304 2p9w_A MAL S 1 allergenic prot 97.7 0.016 5.5E-07 56.0 24.7 202 343-548 8-265 (334)
305 2g8s_A Glucose/sorbosone dehyd 97.7 0.018 6.1E-07 57.2 25.5 149 301-451 17-216 (353)
306 1n7d_A LDL receptor, low-densi 97.7 0.00012 4E-09 80.3 10.0 235 322-567 385-633 (699)
307 1bpo_A Protein (clathrin); cla 97.7 0.06 2.1E-06 53.7 33.8 254 322-591 47-331 (494)
308 2xzh_A Clathrin heavy chain 1; 97.6 0.047 1.6E-06 52.3 30.3 230 307-549 72-333 (365)
309 2xtc_A F-box-like/WD repeat-co 97.6 4.8E-05 1.6E-09 57.1 4.5 37 82-118 1-37 (90)
310 3a9g_A Putative uncharacterize 97.6 0.071 2.4E-06 52.8 29.2 224 348-579 29-330 (354)
311 1bpo_A Protein (clathrin); cla 97.5 0.094 3.2E-06 52.3 30.0 232 306-550 70-333 (494)
312 3s25_A Hypothetical 7-bladed b 97.4 0.063 2.2E-06 51.8 24.6 246 310-588 22-290 (302)
313 1n7d_A LDL receptor, low-densi 97.3 0.00082 2.8E-08 73.5 11.3 208 302-512 406-623 (699)
314 3ei3_A DNA damage-binding prot 97.3 0.17 5.7E-06 58.3 30.7 211 372-588 808-1059(1158)
315 2vpj_A Kelch-like protein 12; 97.3 0.016 5.4E-07 56.0 19.3 230 312-550 14-280 (301)
316 2g8s_A Glucose/sorbosone dehyd 97.3 0.094 3.2E-06 51.9 24.9 230 349-589 19-350 (353)
317 3das_A Putative oxidoreductase 97.3 0.16 5.5E-06 49.8 29.4 121 290-412 20-159 (347)
318 3ii7_A Kelch-like protein 7; p 97.2 0.039 1.3E-06 53.3 21.3 228 314-550 13-274 (306)
319 2xn4_A Kelch-like protein 2; s 97.2 0.039 1.3E-06 53.2 21.0 229 313-550 16-278 (302)
320 1uuj_A Platelet-activating fac 97.1 0.00031 1.1E-08 52.3 3.5 57 86-143 10-66 (88)
321 3ii7_A Kelch-like protein 7; p 97.0 0.036 1.2E-06 53.6 18.6 225 361-593 14-274 (306)
322 1cru_A Protein (soluble quinop 97.0 0.39 1.3E-05 49.3 31.6 147 301-449 26-245 (454)
323 4asc_A Kelch repeat and BTB do 97.0 0.12 4E-06 50.2 22.0 226 315-550 7-279 (315)
324 2xn4_A Kelch-like protein 2; s 97.0 0.072 2.5E-06 51.3 20.0 226 360-593 17-278 (302)
325 4asc_A Kelch repeat and BTB do 96.9 0.095 3.3E-06 50.8 20.6 215 372-593 14-279 (315)
326 3sre_A PON1, serum paraoxonase 96.9 0.31 1.1E-05 47.9 23.8 170 371-546 83-296 (355)
327 1zgk_A Kelch-like ECH-associat 96.8 0.092 3.2E-06 50.7 19.6 229 311-550 23-289 (308)
328 3pbp_A Nucleoporin NUP82; beta 96.8 0.081 2.8E-06 52.7 18.7 144 309-458 28-208 (452)
329 1xi4_A Clathrin heavy chain; a 96.7 0.2 6.7E-06 57.6 22.9 229 353-590 71-330 (1630)
330 3ott_A Two-component system se 96.7 0.84 2.9E-05 50.2 28.5 230 347-592 21-261 (758)
331 2uvk_A YJHT; unknown function, 96.7 0.088 3E-06 52.1 18.7 238 312-556 19-350 (357)
332 3ott_A Two-component system se 96.7 1.1 3.8E-05 49.2 36.0 262 301-588 21-304 (758)
333 2vpj_A Kelch-like protein 12; 96.6 0.088 3E-06 50.6 17.6 187 312-505 62-280 (301)
334 2woz_A Kelch repeat and BTB do 96.6 0.34 1.2E-05 46.9 21.6 226 315-550 18-289 (318)
335 1zgk_A Kelch-like ECH-associat 96.6 0.098 3.4E-06 50.6 17.5 227 358-593 24-289 (308)
336 2woz_A Kelch repeat and BTB do 96.4 0.27 9.4E-06 47.6 19.7 215 372-593 25-289 (318)
337 3s25_A Hypothetical 7-bladed b 96.3 0.84 2.9E-05 43.8 26.1 178 307-504 58-256 (302)
338 2be1_A Serine/threonine-protei 96.2 0.081 2.8E-06 51.7 14.4 189 360-553 11-236 (339)
339 1cru_A Protein (soluble quinop 96.1 1.5 5.1E-05 44.8 29.1 102 348-451 27-163 (454)
340 1tl2_A L10, protein (tachylect 96.0 0.29 9.9E-06 44.1 15.4 147 433-591 42-208 (236)
341 1xi4_A Clathrin heavy chain; a 96.0 0.3 1E-05 56.1 19.1 230 307-549 71-332 (1630)
342 3sbq_A Nitrous-oxide reductase 95.9 1.5 5E-05 45.3 21.8 189 358-548 141-408 (638)
343 2uvk_A YJHT; unknown function, 95.8 0.17 5.7E-06 50.0 15.1 227 358-593 19-344 (357)
344 3pbp_A Nucleoporin NUP82; beta 95.7 1 3.5E-05 44.9 19.6 133 453-588 41-209 (452)
345 3das_A Putative oxidoreductase 95.6 0.77 2.6E-05 44.9 18.6 229 343-578 27-325 (347)
346 1tl2_A L10, protein (tachylect 95.5 0.7 2.4E-05 41.6 15.9 102 393-500 41-160 (236)
347 2zwa_A Leucine carboxyl methyl 95.1 1.1 3.8E-05 48.6 19.7 194 311-506 396-638 (695)
348 2be1_A Serine/threonine-protei 94.5 0.28 9.7E-06 47.8 11.6 185 315-508 12-236 (339)
349 2zwa_A Leucine carboxyl methyl 94.5 1.5 5.1E-05 47.7 18.6 194 357-551 396-638 (695)
350 3sbq_A Nitrous-oxide reductase 93.7 7.5 0.00026 40.2 23.9 220 312-536 141-453 (638)
351 2wg3_C Hedgehog-interacting pr 93.0 8.9 0.00031 39.1 28.0 111 302-413 14-159 (463)
352 1wp5_A Topoisomerase IV; broke 92.3 8.4 0.00029 37.1 18.8 190 311-503 3-225 (323)
353 3b7f_A Glycosyl hydrolase, BNR 91.9 11 0.00036 37.4 27.3 261 302-568 55-391 (394)
354 1suu_A DNA gyrase subunit A; t 91.3 11 0.00036 36.2 24.0 190 311-503 6-231 (312)
355 3no0_A DNA gyrase subunit A; D 89.5 14 0.00047 34.7 20.8 194 302-502 24-245 (276)
356 3b7f_A Glycosyl hydrolase, BNR 89.1 18 0.00063 35.6 30.8 181 315-500 24-259 (394)
357 3qhy_B Beta-lactamase inhibito 89.1 15 0.00051 34.5 19.1 220 349-593 25-248 (282)
358 3l6v_A GYRA, DNA gyrase subuni 87.3 23 0.0008 34.7 22.7 192 309-503 3-265 (370)
359 4hvt_A Ritya.17583.B, post-pro 86.2 40 0.0014 36.3 24.5 232 355-590 137-429 (711)
360 4hvt_A Ritya.17583.B, post-pro 86.2 40 0.0014 36.3 22.9 235 304-547 131-429 (711)
361 4gq2_M Nucleoporin NUP120; bet 81.0 26 0.0009 39.3 15.7 34 523-556 241-274 (950)
362 2wg3_C Hedgehog-interacting pr 80.8 51 0.0017 33.4 26.4 102 349-452 15-159 (463)
363 2voi_B BH3-interacting domain 79.2 1.3 4.5E-05 26.2 2.3 19 2-20 1-19 (34)
364 3qhy_B Beta-lactamase inhibito 78.7 43 0.0015 31.2 19.5 236 303-570 25-264 (282)
365 2kbw_B BH3-interacting domain 78.4 1.6 5.6E-05 25.9 2.5 19 2-20 5-23 (35)
366 2d68_A FOP, FGFR1OP; alpha hel 75.2 3.6 0.00012 30.2 4.2 30 87-116 19-48 (82)
367 1suu_A DNA gyrase subunit A; t 70.7 74 0.0025 30.2 27.8 187 357-547 6-230 (312)
368 3uc1_A DNA gyrase subunit A; D 69.6 80 0.0027 30.2 25.2 199 302-503 42-279 (327)
369 1rij_A E6APN1 peptide; Trp-CAG 68.6 2.6 8.8E-05 22.0 1.5 11 10-20 4-14 (26)
370 1zi0_A DNA gyrase subunit A; b 65.2 94 0.0032 29.3 26.4 229 357-590 1-276 (307)
371 3kci_A Probable E3 ubiquitin-p 64.8 1.1E+02 0.0037 29.9 29.4 220 360-591 63-345 (389)
372 3l6v_A GYRA, DNA gyrase subuni 63.9 1.1E+02 0.0038 29.8 26.6 144 355-502 3-179 (370)
373 3kci_A Probable E3 ubiquitin-p 63.8 1.1E+02 0.0039 29.8 27.7 223 315-548 64-345 (389)
374 4gq2_M Nucleoporin NUP120; bet 62.9 1.8E+02 0.0061 32.5 16.8 39 348-388 236-274 (950)
375 3zwu_A Alkaline phosphatase PH 59.1 29 0.00099 36.4 8.8 61 350-410 478-548 (592)
376 4b4t_P 26S proteasome regulato 56.3 56 0.0019 32.9 10.3 105 80-184 130-243 (445)
377 1zi0_A DNA gyrase subunit A; b 56.0 1.4E+02 0.0046 28.2 25.9 189 311-502 1-225 (307)
378 2k9m_A RNA polymerase sigma fa 55.0 16 0.00054 29.7 4.8 33 83-115 18-51 (130)
379 4a9v_A PHOX; hydrolase, beta-p 53.5 57 0.0019 33.9 9.6 63 348-410 476-548 (592)
380 4gco_A Protein STI-1; structur 52.7 81 0.0028 24.7 10.2 100 95-201 22-123 (126)
381 3uc1_A DNA gyrase subunit A; D 51.2 1.7E+02 0.0058 27.9 26.0 225 360-589 4-277 (327)
382 4fhn_B Nucleoporin NUP120; pro 47.7 28 0.00095 40.1 7.1 30 526-555 246-275 (1139)
383 1sqj_A OXG-RCBH, oligoxylogluc 46.5 3.2E+02 0.011 29.7 25.0 150 301-452 14-190 (789)
384 2j4b_A TAF5, transcription ini 45.6 31 0.0011 28.3 5.2 51 153-203 29-79 (138)
385 3no0_A DNA gyrase subunit A; D 43.4 2E+02 0.0069 26.5 24.8 194 392-590 23-245 (276)
386 2lni_A Stress-induced-phosphop 42.5 1.1E+02 0.0038 23.2 12.9 97 84-187 14-112 (133)
387 4gcn_A Protein STI-1; structur 39.8 1.3E+02 0.0045 23.4 8.9 91 96-187 18-111 (127)
388 3f7f_A Nucleoporin NUP120; nuc 39.5 46 0.0016 35.6 6.6 31 527-557 229-259 (729)
389 2dba_A Smooth muscle cell asso 39.3 1.3E+02 0.0046 23.3 15.1 96 85-187 27-127 (148)
390 3mkr_A Coatomer subunit epsilo 38.7 1.5E+02 0.0051 27.4 9.7 53 88-145 102-157 (291)
391 4fhn_B Nucleoporin NUP120; pro 37.3 88 0.003 35.9 9.1 38 349-388 239-276 (1139)
392 3mkr_A Coatomer subunit epsilo 37.1 2.5E+02 0.0085 25.8 11.5 89 86-186 64-157 (291)
393 3f7f_A Nucleoporin NUP120; nuc 36.1 1.8E+02 0.006 31.2 10.3 28 302-331 222-249 (729)
394 3qou_A Protein YBBN; thioredox 36.1 1.7E+02 0.0057 26.8 9.6 107 90-203 121-229 (287)
395 2bid_A Protein (BID); programm 36.0 20 0.00068 30.3 2.5 19 2-20 78-96 (197)
396 1wp5_A Topoisomerase IV; broke 35.6 2.9E+02 0.0099 26.1 24.8 198 303-503 40-277 (323)
397 1kdl_A YOPD protein; yersinia, 34.1 22 0.00074 19.2 1.5 12 6-17 5-16 (26)
398 2qfc_A PLCR protein; TPR, HTH, 33.9 2.7E+02 0.0093 25.3 11.7 98 88-186 77-182 (293)
399 1oyi_A Double-stranded RNA-bin 33.4 21 0.00071 26.2 2.0 35 82-118 11-45 (82)
400 3qwp_A SET and MYND domain-con 33.4 3.7E+02 0.012 26.6 12.1 98 87-187 288-399 (429)
401 2xz2_A CSTF-50, isoform B; RNA 33.1 32 0.0011 23.8 2.7 33 85-117 15-47 (66)
402 3zwu_A Alkaline phosphatase PH 32.7 1.2E+02 0.0041 31.7 8.5 62 303-366 477-549 (592)
403 1zvt_A Topoisomerase IV subuni 30.2 3.1E+02 0.011 24.8 14.2 145 445-591 4-163 (256)
404 2nxp_A Transcription initiatio 30.2 95 0.0033 25.9 5.9 50 153-202 48-98 (156)
405 4g26_A Pentatricopeptide repea 30.1 4.2E+02 0.015 26.7 12.2 94 85-185 104-201 (501)
406 3urz_A Uncharacterized protein 29.7 2.6E+02 0.009 23.8 10.3 110 86-202 4-131 (208)
407 3bu8_A Telomeric repeat-bindin 28.9 1.5E+02 0.0051 26.2 6.8 71 136-207 90-162 (235)
408 1zvt_A Topoisomerase IV subuni 28.7 3.3E+02 0.011 24.7 14.8 111 393-503 33-163 (256)
409 4asv_A Small glutamine-rich te 28.1 40 0.0014 25.2 2.7 21 80-100 13-33 (92)
410 3iz6_S 40S ribosomal protein S 26.1 62 0.0021 26.6 3.7 24 80-103 93-116 (146)
411 1zbp_A Hypothetical protein VP 25.7 1.8E+02 0.0061 26.8 7.2 54 93-146 4-59 (273)
412 1elw_A TPR1-domain of HOP; HOP 24.4 2E+02 0.007 20.8 12.3 92 89-187 7-100 (118)
413 3q6k_A 43.2 kDa salivary prote 24.3 5E+02 0.017 25.2 25.5 186 372-579 124-342 (381)
414 4a9v_A PHOX; hydrolase, beta-p 24.0 2.2E+02 0.0076 29.5 8.4 60 433-492 477-550 (592)
415 3q6k_A 43.2 kDa salivary prote 22.6 5.4E+02 0.018 25.0 22.1 180 302-503 87-306 (381)
416 3u4t_A TPR repeat-containing p 22.2 3.9E+02 0.013 23.3 9.8 17 128-144 47-63 (272)
417 1elr_A TPR2A-domain of HOP; HO 21.7 2.5E+02 0.0085 20.8 10.3 98 90-187 8-107 (131)
418 2j49_A Transcription initiatio 21.0 85 0.0029 26.0 3.8 32 153-185 31-62 (148)
419 2pl2_A Hypothetical conserved 20.9 3.9E+02 0.013 22.8 10.9 110 89-202 8-127 (217)
420 1sy9_B Cyclic-nucleotide-gated 20.9 38 0.0013 17.7 1.0 8 7-14 9-16 (26)
421 4ady_A RPN2, 26S proteasome re 20.8 3.7E+02 0.013 29.8 9.8 54 91-151 150-210 (963)
422 1reg_X T4 REGA; translational 20.7 92 0.0031 24.2 3.5 43 4-46 64-112 (122)
423 3ct5_A Morphogenesis protein 1 20.2 62 0.0021 27.2 2.9 32 86-117 14-50 (159)
424 2yhc_A BAMD, UPF0169 lipoprote 20.1 4.1E+02 0.014 22.7 10.9 106 86-192 4-129 (225)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-50 Score=419.56 Aligned_cols=286 Identities=17% Similarity=0.295 Sum_probs=260.6
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
...+.+|.++|++++|+|++.+|++|+.||+|+|||+. +......+.+|...|.+++|+|++++|++|+.|+ +|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~----~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~--~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDISFDHSGKLLASCSADM--TI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETT----TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS--CC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC--eE
Confidence 35688999999999999999999999999999999998 5566788999999999999999999999999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++||+.+++++..+. +|...|.+++|+|+++++++|+.|+.|++||+ .+..+..+.+| .+.++.+++++..+++++
T Consensus 175 ~iwd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 175 KLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp CEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCCceeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 999999998887775 78889999999999999999999999999999 57788888776 699999999999999999
Q ss_pred CCCeEEEEEcCCCccccc-ccCCCCeeEEEECCC--------------------CCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 451 THHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDAT--------------------DRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.|+.|++||+.+...... ..|...|.+++|+|+ +.++++|+.|+.|++||++++.++..
T Consensus 254 ~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999999999988765544 457889999999996 67899999999999999999999999
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+.+|...+. .+.++|++++|++|+.||.|++||+.+++++.++.+|...|++++|+|+ +.+|+||+.||+|++|++
T Consensus 334 ~~~h~~~v~---~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 334 LVGHDNWVR---GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECCSSCEE---EEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS-SSCEEEEETTSEEEEEC-
T ss_pred EECCCCcEE---EEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeC
Confidence 999987544 4556799999999999999999999999999999999999999999999 789999999999999986
Q ss_pred C
Q psy10566 590 H 590 (604)
Q Consensus 590 ~ 590 (604)
+
T Consensus 410 r 410 (410)
T 1vyh_C 410 R 410 (410)
T ss_dssp -
T ss_pred C
Confidence 3
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=354.94 Aligned_cols=291 Identities=19% Similarity=0.240 Sum_probs=258.6
Q ss_pred ccceeecccCCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
....+.+.+|.+.|++++|+|+ +.+|+||+.|++|+||++. .........+.+|...|.+++|+|++..+++++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~--~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWR--DERLDLQWSLEGHQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECC--CCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe
Confidence 3445678899999999999985 5699999999999999997 344556678899999999999999999999999
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDG 443 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g 443 (604)
.|+ +|++||+.+++.+..+. .+...+.+++|+|+++++++|+.||.|++||++ ++....+..+ .+.+++|+|++
T Consensus 100 ~D~--~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 100 LDA--HIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG 176 (321)
T ss_dssp TTS--EEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred CCC--cEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence 999 89999999999888776 566779999999999999999999999999994 5666555544 69999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
+++++++.|+.|++||+++++....+ .+..+|.+++|+|++++|++++.|+.|++||++++.....+.+|...+. .
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~---~ 253 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL---N 253 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEE---E
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceE---E
Confidence 99999999999999999988765544 4788999999999999999999999999999999999999999988544 4
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+.++|++.+|++|+.||+|++||+.+++++.++.+|.+.|.+++|+|+ +.+|++++.||+|++||..
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN-GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEeCC
Confidence 556799999999999999999999999999999999999999999999 8899999999999999964
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.8e-43 Score=354.48 Aligned_cols=290 Identities=18% Similarity=0.254 Sum_probs=256.0
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+.+..++|.+|.+.|++++|+|++++|++|+.||+|+|||+. .......+..|...|.+++|+|+++++++++.|
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY----TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT----TCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred ccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC----CCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence 3456778999999999999999999999999999999999988 455677888999999999999999999999999
Q ss_pred CceEEEEEECCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcC
Q psy10566 369 DCHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRS 441 (604)
Q Consensus 369 ~~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~ 441 (604)
+ .|++|++.++. ....+ .+|...|.++.|++++. +++++.|+.|++||+. ++.+..+.+| .|.+++|+|
T Consensus 119 ~--~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 194 (340)
T 1got_B 119 N--ICSIYNLKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP 194 (340)
T ss_dssp C--EEEEEETTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred C--eEEEEECccCCCcceeEEEe-cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC
Confidence 8 89999998753 33333 37889999999998875 8999999999999994 6777777766 699999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
+++.+++++.|+.|++||+++......+ .|...|.+++|+|+++++++++.|+.|++||+++++.+..+... .....+
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~~~~v 273 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD-NIICGI 273 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-Ccccce
Confidence 9999999999999999999987655444 47889999999999999999999999999999998887776532 222245
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.++.++|+++++++|+.||.|++||+.+++.+..+.+|.+.|++++|+|+ +.+|+||+.||+|+|||
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC-CCEEEEEcCCccEEecC
Confidence 56677899999999999999999999999999999999999999999999 89999999999999997
No 4
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.3e-42 Score=344.45 Aligned_cols=292 Identities=25% Similarity=0.463 Sum_probs=262.3
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.....++.+|.+.|++++|+|+|++||+|+.||.|+||+.. .......+.+|...|.+++|+|++++|++++.|+
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~- 87 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY----DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK- 87 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC----CcccchhhccCCCceEEEEEcCCCCEEEEECCCC-
Confidence 35567899999999999999999999999999999999987 4456778899999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.|++||+.+++....+. .|...|.+++|+|+++++++|+.|+.|++||+. ++.+..+..+ .+.+++|+|+++.++
T Consensus 88 -~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 88 -TLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp -EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred -EEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 89999999999888776 678899999999999999999999999999995 6777777665 699999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFG 525 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~ 525 (604)
+++.|+.|++||+++......+ .+..++..++|+|+++++++++.|+.|++||+++++.+..+.+|......+...+.
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 9999999999999987654433 34668999999999999999999999999999999999999888766555544555
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe--CCCcEEEECCC
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS--DDCTVRIWGPH 590 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s--~Dg~I~iW~~~ 590 (604)
.+++.++++|+.||.|++||+.+++.+..+.+|...|.+++|+|+ +.++++++ .|++|++|+.+
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~-~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS-SSEEEEEECTTTCCEEEEECC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc-CCceEEEEccCCccEEEecCC
Confidence 678999999999999999999999999999999999999999999 88999987 69999999864
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6e-42 Score=341.29 Aligned_cols=290 Identities=16% Similarity=0.190 Sum_probs=253.9
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+..++|.+|.+.|++++|+|+|++|++|+.||+|+|||+. +...+..+..|..+|.+++|+|++++|++++.|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~- 77 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE----TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF- 77 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS-
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC----CCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC-
Confidence 34567899999999999999999999999999999999998 5567788899999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C-Ceeeeeece--eEEEEEEcC-CCCE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G-QVLDSWEGV--RVNCLWCRS-DGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~-~~~~~~~~~--~v~~l~~s~-~g~~ 445 (604)
+|++||+.+++.+..+. +|...|.+++|+|+++++++|+.|++|++||++ + .....+.+| .|.+++|+| ++..
T Consensus 78 -~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 78 -RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp -EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred -EEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 89999999999888876 788999999999999999999999999999995 3 344556655 699999999 6789
Q ss_pred EEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
+++++.|+.|++||+......... .+...+..+.++| ++.++++++.|++|++||+++++++..+.+|...+ .
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v---~ 232 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV---S 232 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE---E
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE---E
Confidence 999999999999999876544333 3457788899886 67899999999999999999999999999998854 4
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc-EEEEEeCCCcEEEECCCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ-MIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~-~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.++|++.+|++|+.||+|++||..+++++.++..|...+.+++|+|+++. ++++|++|| +.+|++..
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 4556799999999999999999999999999999999999999999998544 577877665 77777654
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.4e-42 Score=348.69 Aligned_cols=291 Identities=19% Similarity=0.297 Sum_probs=254.1
Q ss_pred CCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 289 ~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
++.+...+|.+|.+.|++++|+|++++||||+.||+|+|||.. +......+..|...|.+++|+|++..+++++.|
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~----~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF----TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TCCEEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECC----CCCcceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 4456788999999999999999999999999999999999987 445567778899999999999999999999999
Q ss_pred CceEEEEEECCCce------EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEE
Q psy10566 369 DCHELWVWNIETEL------LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWC 439 (604)
Q Consensus 369 ~~~~i~vwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~ 439 (604)
+ .+++|++.... ....+. .|...|.+++|+|++..+++++.|++|++||+ .++.+..+.+| .|.++.+
T Consensus 128 ~--~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~ 204 (354)
T 2pbi_B 128 N--KCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL 204 (354)
T ss_dssp S--EEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred C--CEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE
Confidence 8 89999986431 122222 57889999999999999999999999999999 57788888776 6889998
Q ss_pred cC--CCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc
Q psy10566 440 RS--DGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 440 s~--~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
+| +++.+++++.|+.|++||++++.....+ .|...|.+++|+|++.++++++.|++|++||+++++.+..+..+..
T Consensus 205 ~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~- 283 (354)
T 2pbi_B 205 APSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI- 283 (354)
T ss_dssp CCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC-
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc-
Confidence 87 5789999999999999999987765544 4788999999999999999999999999999999887776654332
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
...+.++.++|++.++++|+.||.|++||+.+++.+..+.+|.+.|++++|+|+ +.+|++|+.||+|+||+
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd-g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD-GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC-CCEEEEEcCCCCEEecC
Confidence 223445666899999999999999999999999999999999999999999999 89999999999999996
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=343.42 Aligned_cols=299 Identities=19% Similarity=0.299 Sum_probs=241.4
Q ss_pred ccceeecccCCC-cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee-EEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCD-EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~-~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
..+++++.+|.+ .|++++|+|+|++||+|+.|++|+|||+. ....... ....+|...|.+++|+|++++|++++.|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~--~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEE--TTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcC--CCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence 456788999998 99999999999999999999999999997 2222222 2346899999999999999999999999
Q ss_pred CceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----Ceeeeeece--eEEEEEEc
Q psy10566 369 DCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG----QVLDSWEGV--RVNCLWCR 440 (604)
Q Consensus 369 ~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~--~v~~l~~s 440 (604)
+ ++++||+.++. +...+. +|...|.+++|+|++++|++|+.|+.|++||++. ..+..+.+| .|.+++|+
T Consensus 83 ~--~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 83 A--TTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp S--CEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred C--cEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 8 89999998764 344444 7889999999999999999999999999999953 234445554 69999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-------------
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR------------- 504 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~------------- 504 (604)
|+++++++++.|+.|++||...... .....|...|.+++|+|++++|++++.|++|++||....
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 9999999999999999999987642 234567889999999999999999999999999997432
Q ss_pred --ceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc----c-----eEEeeCCCCCeeEEEEcCCCC
Q psy10566 505 --ILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL----P-----IATLSGHTRTVSCVAWNPVYH 572 (604)
Q Consensus 505 --~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~----~-----~~~l~~h~~~V~~v~~sp~~~ 572 (604)
.++..+.+ |... +..+.+++++..+++++.|+.|++|+...+. + .....+|...|++++|+|++.
T Consensus 240 ~~~~~~~~~~~h~~~---v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 316 (345)
T 3fm0_A 240 SWKCICTLSGFHSRT---IYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP 316 (345)
T ss_dssp EEEEEEEECSSCSSC---EEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST
T ss_pred ccceeEEecCCCCCc---EEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc
Confidence 22333333 4443 4445667999999999999999999987542 1 123458999999999999955
Q ss_pred cEEEEEeCCCcEEEECCCCCCCCCc
Q psy10566 573 QMIASVSDDCTVRIWGPHLNTNKSP 597 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~~~~~~~ 597 (604)
.+||||+.||+|++|++.+++...+
T Consensus 317 ~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 317 GLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TEEEEEETTSCEEEEEECC------
T ss_pred eEEEEcCCCCcEEEEEecCCCCccc
Confidence 7999999999999999998775433
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7e-41 Score=335.96 Aligned_cols=292 Identities=15% Similarity=0.233 Sum_probs=254.8
Q ss_pred cceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCC-ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
....+|.+|.+.|++++|+|++ ++|+||+.|++|++|++.... .....+..+.+|...|.+++|+|++++|++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4567899999999999999965 799999999999999986221 12456788999999999999999999999999999
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCC-----
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSD----- 442 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~----- 442 (604)
+|++||+.+++....+. +|...|.+++|+|++.++++|+.|++|++||+++..+..+.+| .+.++.+.|.
T Consensus 88 --~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 88 --TLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp --EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC-----
T ss_pred --EEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 89999999999888776 7889999999999999999999999999999999888888776 6899999985
Q ss_pred -CCEEEEEeCCCeEEEEEcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 443 -GKSVLAADTHHRIRTYNFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 443 -g~~l~~~~~dg~I~i~d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
+..+++++.|+.|++||+++..... ...|...|.+++|+|+++++++++.|+.|++||+.+++.+..+..+. .+
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~v 240 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD----EV 240 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS----CE
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC----cE
Confidence 4589999999999999998866543 44588999999999999999999999999999999999988887653 34
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--------CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG--------HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--------h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..+.++|++.++++++.+ .+++|++..+..+..+.. |...|.+++|+|+ +.+|++|+.||+|+||++.++
T Consensus 241 ~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 241 FSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD-GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC-CCEEEEeecCceEEEEEEeec
Confidence 556778999999988765 599999998777766643 4567999999999 899999999999999998764
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-41 Score=347.48 Aligned_cols=292 Identities=19% Similarity=0.167 Sum_probs=233.3
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEEC------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSK------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+|.+.|++++|||||++||+||. |++|++|+...............+|...|.+++|+|++. +++++.|+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg- 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSG- 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTS-
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCC-
Confidence 3579999999999999999999997 778999987633222233344556889999999999985 55677787
Q ss_pred eEEEEEECCCceEEEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCC
Q psy10566 371 HELWVWNIETELLRVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
+|++||+.+++..... ..+|...|++++|+|++++|++|+.|+.|++||++ ++.+..+.+| .|.+++|++++.
T Consensus 116 -~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 116 -AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp -CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred -EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 8999999988654322 23688899999999999999999999999999995 6777777765 799999999875
Q ss_pred -EEEEEeCCCeEEEEEcCCCcccccc---cCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccccceEE
Q psy10566 445 -SVLAADTHHRIRTYNFEHLTDSNLL---QEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 445 -~l~~~~~dg~I~i~d~~~~~~~~~~---~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
.+++++.|+.|++||+++.+..... .+...+.+++|+|++ .++++++.|+.|++||+++++.+..+.+|...+..
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 7889999999999999987655443 356779999999975 67889999999999999999999999998886554
Q ss_pred EEeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 520 IHSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 520 i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
+.++|++ ++|++|+.||+|+|||+++++++..+ +|.+.|++++|+|.++.+|+|||.||+|++|++....+.
T Consensus 275 ---l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 275 ---LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ---EEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred ---EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 4456765 68999999999999999999887665 799999999999944899999999999999999775443
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.6e-42 Score=352.25 Aligned_cols=296 Identities=16% Similarity=0.263 Sum_probs=253.5
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+.++|.+|.+.|++++|+|+|++|+||+.||+|+|||+. +......+..|...|.+++|+|++++|++++.|+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~----~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~- 130 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL----TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS- 130 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT----TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS-
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCccceEEecCCCCEEEEEECCCCCEEEEeeCCC-
Confidence 45678999999999999999999999999999999999988 5566788899999999999999999999999998
Q ss_pred eEEEEEECCCceE------EEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC-CCeeeee-----ece--eEE
Q psy10566 371 HELWVWNIETELL------RVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE-GQVLDSW-----EGV--RVN 435 (604)
Q Consensus 371 ~~i~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-~~~~~~~-----~~~--~v~ 435 (604)
.+++||+.+... ......+|...|.++.|+|+ +..|++|+.|++|++||+. ++.+..+ .+| .+.
T Consensus 131 -~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 131 -ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp -CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred -cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 899999875321 12233478889999999996 4579999999999999994 6666655 233 689
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEEcCCC-cc-cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 436 CLWCRS-DGKSVLAADTHHRIRTYNFEHL-TD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 436 ~l~~s~-~g~~l~~~~~dg~I~i~d~~~~-~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
++.+++ +++.+++++.|+.|++||++.. .. .....|...|.+++|+|++.++++++.|++|++||++++..+..+..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 999977 8899999999999999999743 33 33445889999999999999999999999999999999998888765
Q ss_pred cccc----eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe----eCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 513 VTQG----QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL----SGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 513 ~~~~----~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l----~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
+... ...+.++.++|+|+++++|+.||.|++||..+++.+..+ .+|.+.|++++|+|+ +.+|+||+.||+|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD-GSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSS-SSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCC-CCEEEEeeCCCCE
Confidence 4321 112445667899999999999999999999999888877 689999999999999 8999999999999
Q ss_pred EEECCCCCC
Q psy10566 585 RIWGPHLNT 593 (604)
Q Consensus 585 ~iW~~~~~~ 593 (604)
+||++...+
T Consensus 369 ~iW~~~~~~ 377 (380)
T 3iz6_a 369 KIWAFSGHR 377 (380)
T ss_dssp EEEECCSSS
T ss_pred EEEecCCCc
Confidence 999998764
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-40 Score=338.01 Aligned_cols=295 Identities=19% Similarity=0.274 Sum_probs=246.3
Q ss_pred CccceeecccCCCcEEEEEE-----cC-CCCeEEEEECCCeEEEEEeCCCC---ceeEeeEEeccCCCCeeEEEECCCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKF-----SP-DGLKLATGSKDTTVIIWDVDPVT---FTCQHRKTLEGHTLGVAYLAWSPDSS 360 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~f-----sp-dg~~lasgs~dg~i~iwd~~~~~---~~~~~~~~l~~h~~~V~~l~~spd~~ 360 (604)
......+|.+|.+.|++++| ++ ++++||||+.|++|+|||+.... ........+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 34567789999999999999 77 99999999999999999997322 12456778899999999999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ce--eEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GV--RVN 435 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~--~v~ 435 (604)
++++++.|+ +|++||+.+++....+. +|...|.+++|+|+++++++++.|+.|++||+.+....... ++ .+.
T Consensus 90 ~l~s~s~D~--~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 90 FAISSSWDK--TLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEEEETTS--EEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred EEEEEcCCC--cEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 999999998 89999999999887776 68899999999999999999999999999999766544433 23 699
Q ss_pred EEEEcCCC----------CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC-C
Q psy10566 436 CLWCRSDG----------KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD-R 504 (604)
Q Consensus 436 ~l~~s~~g----------~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-~ 504 (604)
+++|+|++ .++++++.|+.|++||...........|...|.+++|+|++++|++++.|+.|++||+.+ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999987 789999999999999965444444556888999999999999999999999999999954 4
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE--Eee-----------CCCCCeeEEEEcCCC
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA--TLS-----------GHTRTVSCVAWNPVY 571 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~--~l~-----------~h~~~V~~v~~sp~~ 571 (604)
.....+. +.. .+..+.++|++.++++| .|+.|++||+.+++... .+. +|...|++++|+|+
T Consensus 247 ~~~~~~~-~~~---~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~- 320 (343)
T 2xzm_R 247 YPQREFD-AGS---TINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL- 320 (343)
T ss_dssp SCSEEEE-CSS---CEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS-
T ss_pred ccceeec-CCC---cEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC-
Confidence 3444443 222 25556678999887755 57789999998876544 443 68889999999999
Q ss_pred CcEEEEEeCCCcEEEECCCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|++|+.||+|++|++.++.
T Consensus 321 g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp SCCEEEEETTSEEEEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEEccC
Confidence 7899999999999999987643
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=339.27 Aligned_cols=292 Identities=16% Similarity=0.168 Sum_probs=234.0
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCC-------CCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP-------VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~-------~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.|...|.+++|+|||++|++++ |+++++||... .............|..+|.+++|+|++ .|++++.|+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg-- 103 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG-- 103 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS--
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC--
Confidence 4677899999999999999887 77888887420 000000111222356789999999985 688999998
Q ss_pred EEEEEECCCceEEEE---ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCC-
Q psy10566 372 ELWVWNIETELLRVK---LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGK- 444 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~- 444 (604)
+|++||+.+++.... ...+|...|++++|+|++++|++|+.|++|++||+ +++.+..+.+| .|.+++|++++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 899999998864332 23478899999999999999999999999999999 57778888876 799999999985
Q ss_pred EEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
.+++++.|++|++||+++.+....+. +...+.+++|+|+ +.++++|+.|+.|++||+++++++..+.+|...+..
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~- 262 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG- 262 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE-
T ss_pred ceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE-
Confidence 68899999999999999887655443 4567899999985 567889999999999999999999999999886544
Q ss_pred EeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCCCCcc
Q psy10566 521 HSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598 (604)
Q Consensus 521 ~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~~~~ 598 (604)
+.++|++ ++|++|+.||+|+|||+.+++++ .+.+|.+.|++++|+|++..+|+|||.||+|++|++.+...+.|.
T Consensus 263 --v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~~p~ 338 (344)
T 4gqb_B 263 --LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPAPG 338 (344)
T ss_dssp --EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-------
T ss_pred --EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCCCCC
Confidence 4556887 68999999999999999998754 578999999999999996678999999999999999887654443
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.3e-40 Score=339.06 Aligned_cols=282 Identities=25% Similarity=0.343 Sum_probs=239.7
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC------------------CCeeEEEECCCCC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT------------------LGVAYLAWSPDSS 360 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~------------------~~V~~l~~spd~~ 360 (604)
+|.+.|++++|+|||++||+|+ +++++||++. .+.....+..|. ..|.+++|+|+++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~----~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVS----DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETT----TCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEec----CCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 6999999999999999999986 7899999998 334444554442 2499999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec-eeEEEEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG-VRVNCLW 438 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~v~~l~ 438 (604)
+|++++.|+ .|++||+.+++....+. +|...|.+++|+|++.+|++++.|++|++||+. ++....+.. ..+.+++
T Consensus 137 ~l~s~~~d~--~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 213 (393)
T 1erj_A 137 FLATGAEDR--LIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 213 (393)
T ss_dssp EEEEEETTS--CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred EEEEEcCCC--eEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEE
Confidence 999999998 89999999998887776 788899999999999999999999999999995 555544443 3689999
Q ss_pred EcC-CCCEEEEEeCCCeEEEEEcCCCccccc--------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC-----
Q psy10566 439 CRS-DGKSVLAADTHHRIRTYNFEHLTDSNL--------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----- 504 (604)
Q Consensus 439 ~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----- 504 (604)
++| +++++++++.|+.|++||++++..... ..|...|.+++|+|+++++++++.|+.|++||+++.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 999 899999999999999999988654433 346788999999999999999999999999999763
Q ss_pred -------ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC------CC
Q psy10566 505 -------ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP------VY 571 (604)
Q Consensus 505 -------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp------~~ 571 (604)
.+...+.+|...+ .++.+++++.+|++|+.||.|++||..+++++..+.+|.+.|.+++|+| +
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~- 369 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFV---LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE- 369 (393)
T ss_dssp -------CEEEEEECCSSCE---EEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTT-
T ss_pred ccCCCCCcceEEEecccCcE---EEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCC-
Confidence 3445666777644 4455679999999999999999999999999999999999999999986 4
Q ss_pred CcEEEEEeCCCcEEEECCCCC
Q psy10566 572 HQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 572 ~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+.+|+||+.||+|+||++...
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEEC
T ss_pred CCEEEEECCCCcEEECccccc
Confidence 689999999999999998654
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-39 Score=327.19 Aligned_cols=290 Identities=17% Similarity=0.233 Sum_probs=228.5
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-cc-CCCCeeEEEECCCCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EG-HTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~-h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.++++.|.+|.+.|++++|+|+ +||+|+.|++|+|||+.. ........+ .+ |...|.+++|+|++++|++++.|
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~--~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKY--DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSS--SCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecC--CCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 4567889999999999999998 999999999999999973 223444555 44 99999999999999999999999
Q ss_pred CceEEEEEECCC-------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-C----Ceeeeeece--eE
Q psy10566 369 DCHELWVWNIET-------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-G----QVLDSWEGV--RV 434 (604)
Q Consensus 369 ~~~~i~vwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~----~~~~~~~~~--~v 434 (604)
+ +|++||+.. ......+ .+|...|.+++|+|++++|++|+.|++|++||++ . +.+..+.+| .|
T Consensus 80 ~--~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 80 S--TVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp S--CEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred C--cEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 8 899999853 2334444 3788999999999999999999999999999993 2 345556655 69
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCC--cc-cccccCCCCeeEEEECCC--CCEEEEEecCCeEEEEecCCC-----
Q psy10566 435 NCLWCRSDGKSVLAADTHHRIRTYNFEHL--TD-SNLLQEDHPVMSFTIDAT--DRLALLNVSTQGVHLWDLRDR----- 504 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg~I~i~d~~~~--~~-~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~I~lwd~~~~----- 504 (604)
.+++|+|++..+++++.|++|++||.... .. ..+..|...|.+++|+|+ +..+++++.|++|++||+.++
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 99999999999999999999999998765 22 234457889999999998 678999999999999999764
Q ss_pred ---ceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc--ceEE-eeCCCC-CeeEEEEcCC-CCcEE
Q psy10566 505 ---ILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL--PIAT-LSGHTR-TVSCVAWNPV-YHQMI 575 (604)
Q Consensus 505 ---~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~--~~~~-l~~h~~-~V~~v~~sp~-~~~~l 575 (604)
.....+.+ |...+.. +.++++ .+|++|+.||.|+|||..+++ .... +.+|.. .|++++|+|. ++.+|
T Consensus 237 ~~~~~~~~~~~~h~~~v~~---v~~s~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYN---VAWGFN-GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL 312 (330)
T ss_dssp EEEEEEEECCSCCSSCEEE---EEECTT-SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE
T ss_pred ceeEEeeecccccccceEE---EEEcCC-CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE
Confidence 33444444 5554444 444554 489999999999999998774 3333 467877 8999999993 27899
Q ss_pred EEEeCCCcEEEECCCC
Q psy10566 576 ASVSDDCTVRIWGPHL 591 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~ 591 (604)
+||+.||+|+||+++.
T Consensus 313 as~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTSEEEEEEC--
T ss_pred EEecCCCcEEEEEecc
Confidence 9999999999999865
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-39 Score=354.69 Aligned_cols=291 Identities=19% Similarity=0.287 Sum_probs=245.6
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.....+.+|.+.|++++|+|++. .|++|+.|++|++||.. ..+....+.+|...|.+++|+|++++|++++.|+
T Consensus 138 ~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~----~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~- 212 (611)
T 1nr0_A 138 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP----PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG- 212 (611)
T ss_dssp CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT----TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC----CCeEeeeeccccCceEEEEECCCCCEEEEEECCC-
Confidence 34567899999999999999987 59999999999999987 5567788999999999999999999999999999
Q ss_pred eEEEEEECCCceEEEEecC------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeee---------------
Q psy10566 371 HELWVWNIETELLRVKLNH------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDS--------------- 428 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~--------------- 428 (604)
+|++||+.+++....+.. +|...|.+++|+|++++|++++.|++|++||+. ++.+..
T Consensus 213 -~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 213 -TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp -CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred -cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 899999999988877743 688999999999999999999999999999985 433322
Q ss_pred ----------------------------eece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc---------
Q psy10566 429 ----------------------------WEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--------- 469 (604)
Q Consensus 429 ----------------------------~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--------- 469 (604)
+.+| .|.+++|+|+|+++++++.|+.|++||+.++......
T Consensus 292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~ 371 (611)
T 1nr0_A 292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371 (611)
T ss_dssp ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEE
Confidence 2233 5899999999999999999999999998764321110
Q ss_pred --------------------------------------------------------------------------cCCCCe
Q psy10566 470 --------------------------------------------------------------------------QEDHPV 475 (604)
Q Consensus 470 --------------------------------------------------------------------------~~~~~i 475 (604)
.+...+
T Consensus 372 ~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v 451 (611)
T 1nr0_A 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS 451 (611)
T ss_dssp EEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCE
T ss_pred EEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCc
Confidence 012346
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-Ccce
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPI 552 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~ 552 (604)
.+++|+|+++++++++.|++|++||+.++.. +.. .+|... +.++.++|+|++|++++.|++|++||+.+ ++++
T Consensus 452 ~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~---v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~ 527 (611)
T 1nr0_A 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAE---ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA 527 (611)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSC---EEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred eEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCc---eEEEEECCCCCEEEEEcCCCCEEEEEcCCCCcee
Confidence 7899999999999999999999999987653 233 456653 55566789999999999999999999987 6655
Q ss_pred EE--eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 553 AT--LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 553 ~~--l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.. +.+|...|++++|+|+ +.+||||+.|++|++|++..+.
T Consensus 528 ~~~~~~~H~~~V~~v~fspd-g~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 528 HTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp CCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCTT
T ss_pred eeeeeeecccceeEEEECCC-CCEEEEEECCCcEEEEECCCcc
Confidence 44 3459999999999999 8999999999999999998765
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.6e-38 Score=319.52 Aligned_cols=293 Identities=17% Similarity=0.255 Sum_probs=247.0
Q ss_pred cceeecccCCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCCC-ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVT-FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~~-~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
....+|+||.+.|++++|+|+ +++|||||.||+|+|||+.... ........+.+|...|.+++|+|++++|++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 455689999999999999998 6799999999999999997432 23456778899999999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee--ec--eeEEEEEEcCCC--
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW--EG--VRVNCLWCRSDG-- 443 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~--~~v~~l~~s~~g-- 443 (604)
.|++|+........... .+...+..+.+++++..+++++.|+.+++||......... .+ ..+..+++++++
T Consensus 109 --~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 109 --TLRLWDLTTGTTTRRFV-GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp --EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred --cceEEeecccceeeeec-CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 89999999988777665 5667789999999999999999999999999965443332 22 368888888764
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
..+++++.|+.|++||+.+.+....+ .+..+|.+++|+|+++++++++.|+.|++||+++.+.+..+..+.. +..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----v~~ 261 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI----INA 261 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC----EEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce----EEe
Confidence 56889999999999999987665444 4788999999999999999999999999999999999888876542 445
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee---------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS---------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~---------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.++|++.+ ++++.|+.|++||++++..+..+. +|...|++++|+|+ +.+|++|+.||+|+|||+++|+
T Consensus 262 ~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 262 LCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD-GQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT-SSEEEEEETTSCEEEEEEEC--
T ss_pred eecCCCCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeCCCcC
Confidence 566677755 556679999999999887766553 68889999999999 8999999999999999999875
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-38 Score=346.99 Aligned_cols=284 Identities=26% Similarity=0.400 Sum_probs=255.5
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
..+....+.+|.+.|++++|+|++++|++++.|++|++||.. ......+.+|...|.+++|+|+++++++++.++
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 366 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-----GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDK 366 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-----CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 346678889999999999999999999999999999999986 234567888999999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.|++||. +++....+. .|...|.+++|+|++++|++++.|+.|++||.+++.+..+.++ .|.+++|+|+++.++
T Consensus 367 --~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 367 --TVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp --EEEEEET-TCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred --EEEEEcC-CCCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 8999996 455555554 6788999999999999999999999999999999988888776 699999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+++.|+.|++||...........+...|.+++|+|+++++++++.|+.|++||. +++.++.+.+|...+. .+.++|
T Consensus 443 ~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~---~l~~s~ 518 (577)
T 2ymu_A 443 SASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR---GVAFSP 518 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE---EEEECT
T ss_pred EEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEE---EEEEcC
Confidence 999999999999876655666678899999999999999999999999999995 6788899999988544 455679
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
++++|++++.||.|++||. +++++.++.+|.+.|++++|+|+ +.+|+|++.||+|++||
T Consensus 519 dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d-g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD-GQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEeC
Confidence 9999999999999999995 68899999999999999999999 78999999999999997
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-38 Score=348.80 Aligned_cols=294 Identities=14% Similarity=0.199 Sum_probs=250.2
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC-
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED- 369 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~- 369 (604)
......+.+|.+.|++++|+|||++||+|+.||+|+|||+. .........+.+|..+|.+++|+|+++.|++++.+.
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~--~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT--QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS--STTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECC--CCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 34667899999999999999999999999999999999986 223344567889999999999999999999988753
Q ss_pred -ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCC
Q psy10566 370 -CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 370 -~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
.+.|++||. +.....+ .+|...|.+++|+|++. .|++|+.|++|++||.. ++....+.+| .|.+++|+|+|+
T Consensus 127 ~~~~v~~wd~--~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 127 RFGHVFLFDT--GTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp CSEEEEETTT--CCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred ceeEEEEeeC--CCCccee-cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence 247888884 4444444 37889999999999987 59999999999999984 5666777776 699999999999
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccc--------cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLL--------QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~--------~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~ 516 (604)
.+++++.|++|++||..+++....+ .|...|.+++|+|++++|++++.|++|++||+.+++.+.++..+...
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 9999999999999999877654443 57889999999999999999999999999999999988887643221
Q ss_pred e-EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 517 Q-FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 517 ~-~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. ..+...+ ++..+++++.||.|++||..++++...+.+|...|++++|+|+ +.+|++++.||+|++||+.++.
T Consensus 284 ~~~~~~~~~---~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd-g~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 284 EDQQLGIIW---TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD-GKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp GGCEEEEEE---CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC
T ss_pred cceeEEEEE---cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCCc
Confidence 1 1222222 5788999999999999999999988899999999999999999 8999999999999999998764
No 19
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-38 Score=327.40 Aligned_cols=292 Identities=11% Similarity=0.117 Sum_probs=245.7
Q ss_pred ccceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d 368 (604)
.+....+.+|.+.|++++|+|++ ++||+|+.||.|+|||+. +..........+|...|.+++|+| ++.+|++++.|
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYD--VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETT--STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCC--CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 34566889999999999999999 899999999999999998 333333444457999999999999 77999999999
Q ss_pred CceEEEEEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCC
Q psy10566 369 DCHELWVWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGK 444 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~ 444 (604)
+ .|++||+.+... ..+. ..+...|.+++|+|++++|++|+.|+.|++||++++.+..+.++ .|.+++|+|+++
T Consensus 141 ~--~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 141 G--ATTLRDFSGSVI-QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp T--EEEEEETTSCEE-EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCT
T ss_pred C--EEEEEECCCCce-EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCC
Confidence 8 899999997443 3333 23457799999999999999999999999999998888888776 799999999999
Q ss_pred -EEEEEeCCCeEEEEEcCC----CcccccccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCCceeeEeeccccce-
Q psy10566 445 -SVLAADTHHRIRTYNFEH----LTDSNLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ- 517 (604)
Q Consensus 445 -~l~~~~~dg~I~i~d~~~----~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~- 517 (604)
.+++++.|+.|++||+++ ........+...+.+++|+| ++.++++++.|+.|++||+++++....+.+|....
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 899999999999999998 44455557889999999999 99999999999999999999998887777554211
Q ss_pred ---E----------EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--CCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 518 ---F----------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG--HTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 518 ---~----------~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
. .+..+.++|++++ +|+.||.|++||+.+++++..+.+ |...+.+++|+|+ +.+|++|+ ||
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~-g~~l~s~s-d~ 373 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT-GDVLASGM-GF 373 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT-SSEEEEEE-TT
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC-ccEEEEec-CC
Confidence 0 1122344567766 778999999999999999999987 4677888899999 88999997 99
Q ss_pred cEEEECCCC
Q psy10566 583 TVRIWGPHL 591 (604)
Q Consensus 583 ~I~iW~~~~ 591 (604)
.|++|++++
T Consensus 374 ~i~iw~~~~ 382 (383)
T 3ei3_B 374 NILIWNRED 382 (383)
T ss_dssp EEEEEECC-
T ss_pred cEEEEecCC
Confidence 999999875
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=318.13 Aligned_cols=288 Identities=15% Similarity=0.189 Sum_probs=253.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.....|.+|.+.|++++|+|+|++|++|+.||.|+|||+. .......+.+|...|.+++|+|++++|++++.|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-- 96 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL----NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY-- 96 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT--
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCC----CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC--
Confidence 3445689999999999999999999999999999999998 5567788999999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCC-C-----------eeeeeece--
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEG-Q-----------VLDSWEGV-- 432 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~-~-----------~~~~~~~~-- 432 (604)
.|++||+.+++....+. +...|.+++|+|+++++++++.+ +.|.+||+.. . ....+..+
T Consensus 97 ~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred eEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 89999999999888877 67889999999999999999999 9999999842 1 12222222
Q ss_pred --eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC-Ccccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~-~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
.+.+++|+|+++.+++++.+|.|++||+.+ ..... ...+...|.+++|+|++.++++++.|+.|++||+++++.+.
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 799999999999999999999999999998 44433 33478899999999999999999999999999999999888
Q ss_pred EeeccccceEEEEeeeCCCCCcEEEEEeCCC--------------cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFVASGSEDG--------------KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg--------------~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
.+.. .. .+..+.++|+++++++++.++ .+++||..+++++..+.+|...|++++|+|+ +.+
T Consensus 255 ~~~~-~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~ 329 (369)
T 3zwl_B 255 KYET-DC---PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQ-GTS 329 (369)
T ss_dssp EEEC-SS---CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SSE
T ss_pred eecC-CC---CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCC-CCE
Confidence 8873 33 244456679999999999988 8999999999999999999999999999999 899
Q ss_pred EEEEeCCCcEEEECCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~ 592 (604)
|++++.||.|++|+++.+
T Consensus 330 l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 330 YASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEETTSEEEEEEECHH
T ss_pred EEEEcCCCeEEEEECccc
Confidence 999999999999999764
No 21
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.2e-38 Score=330.89 Aligned_cols=295 Identities=13% Similarity=0.156 Sum_probs=237.6
Q ss_pred ceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCc
Q psy10566 293 TTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDC 370 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~ 370 (604)
......+|...|+|++|+| ++.+||+|+.||+|+|||+. .........+.+|.+.|++|+|+| ++.+|++++.|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~--~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~- 187 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFG--IKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG- 187 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSS--CCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECC--CCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-
Confidence 3456678999999999999 56799999999999999998 333445566788999999999998 688999999998
Q ss_pred eEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCC-EE
Q psy10566 371 HELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGK-SV 446 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~-~l 446 (604)
+|++||++++....... ..+...+.+++|+|++.+|++|+.||.|++||++++.+..+.+| .|.+++|+|++. .+
T Consensus 188 -~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 188 -TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp -CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred -EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEE
Confidence 89999998776544333 23445678999999999999999999999999998888777776 799999999876 67
Q ss_pred EEEeCCCeEEEEEcCCCcccc----cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc----eE
Q psy10566 447 LAADTHHRIRTYNFEHLTDSN----LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG----QF 518 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~----~~ 518 (604)
++++.|+.|++||+++..... ...|..+|.+++|+|++.+|++++.|+.|++||+.++.....+..|... ..
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 346 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLT 346 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSC
T ss_pred EEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccce
Confidence 789999999999998765432 2357889999999999999999999999999999998887777655432 11
Q ss_pred EEEeeeCCCCCcEEEEEe------------CCCcEEEEeCCCCcceEEee-CCCCCeeEE-EEcCCCCcEEEEEeCCCcE
Q psy10566 519 TIHSCFGGANQDFVASGS------------EDGKVYIWHVKRELPIATLS-GHTRTVSCV-AWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs------------~dg~I~iwd~~~~~~~~~l~-~h~~~V~~v-~~sp~~~~~l~s~s~Dg~I 584 (604)
.+. +.+++++.++++++ .++.|++||..+++.+..+. +|...|.++ +|+|+ +.+|++|+ |++|
T Consensus 347 ~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspd-g~~lasg~-d~~i 423 (435)
T 4e54_B 347 PIK-AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPM-GDTLASAM-GYHI 423 (435)
T ss_dssp CCB-CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTT-SSCEEEEC-SSEE
T ss_pred eEE-EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCC-CCEEEEEc-CCcE
Confidence 222 22346666666654 34679999999999988875 678889887 69999 78898876 7899
Q ss_pred EEECCCCCCC
Q psy10566 585 RIWGPHLNTN 594 (604)
Q Consensus 585 ~iW~~~~~~~ 594 (604)
+||++++++.
T Consensus 424 ~iW~~~~gk~ 433 (435)
T 4e54_B 424 LIWSQQEART 433 (435)
T ss_dssp EECCCC----
T ss_pred EEEECCcCee
Confidence 9999998764
No 22
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.2e-38 Score=324.72 Aligned_cols=291 Identities=14% Similarity=0.130 Sum_probs=250.0
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC--ceeEeeEEeccCCCCeeEEEECCC----C---CeE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT--FTCQHRKTLEGHTLGVAYLAWSPD----S---SHL 362 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~--~~~~~~~~l~~h~~~V~~l~~spd----~---~~l 362 (604)
...+.+.+|.+.|++++|+| ++|++|+.||+|+||++.... ........+.+|..+|.+++|+|+ + ++|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 45678899999999999999 799999999999999998322 002256778899999999999999 9 999
Q ss_pred EEEeCCCceEEEEEECCCceE-----EEEecCCC-----CCCeEEEEEe----cCCCE-EEEEecCCeEEEEEcCC----
Q psy10566 363 LVVGPEDCHELWVWNIETELL-----RVKLNHSP-----EDSLTSCSWN----RDGTK-FVCGGIRGQFYQCDIEG---- 423 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~-----~~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~iwd~~~---- 423 (604)
++++.|+ .|++||+.++.. ...+. .| ...|.+++|+ |+++. |++++.||.|++||+..
T Consensus 85 ~s~~~dg--~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 85 ATTSFSG--DLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEETTS--CEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEcCCC--CEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 9999998 899999998875 55555 45 4889999999 99999 99999999999999954
Q ss_pred ---Ceee-----eee---------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc----C---CCCeeEEE
Q psy10566 424 ---QVLD-----SWE---------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ----E---DHPVMSFT 479 (604)
Q Consensus 424 ---~~~~-----~~~---------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~----~---~~~i~~~~ 479 (604)
+.+. .+. ...+.+++|+|++ .+++++.|+.|++||+++......+. + ...+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 4544 553 3369999999999 99999999999999999876665554 4 88999999
Q ss_pred ECCCCCEEEEEecC---CeEEEEecCCCceeeEeec-------------cccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 480 IDATDRLALLNVST---QGVHLWDLRDRILLRKFQG-------------VTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 480 ~s~~~~~l~~~~~d---g~I~lwd~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
|+|++.++++++.| +.|++||+++++.+..+.+ |... +..+.++|++++|++|+.||.|++
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW---VMSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC---EEEEEECSSSSEEEEEETTSEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc---EEEEEECCCCCEEEEEeCCCeEEE
Confidence 99999999999999 9999999999999999988 7664 444556799999999999999999
Q ss_pred EeCCCCcceEEee------CC---------------CCCeeEEEEcCCCC----------cEEEEEeCCCcEEEECCCCC
Q psy10566 544 WHVKRELPIATLS------GH---------------TRTVSCVAWNPVYH----------QMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 544 wd~~~~~~~~~l~------~h---------------~~~V~~v~~sp~~~----------~~l~s~s~Dg~I~iW~~~~~ 592 (604)
||+.+++++..+. +| ...|++++|+|+ + .+|++++.||.|++|+++++
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~-g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK-GWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT-TTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc-cccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999999999999 88 999999999999 5 79999999999999999875
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.1e-37 Score=341.96 Aligned_cols=291 Identities=16% Similarity=0.266 Sum_probs=246.6
Q ss_pred cceeecccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCc-eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTF-TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~-~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
.....+++|.+.|++++|+|++ ++|+|||.|++|+||++..... .......+.+|...|.+++|+|++++|++++.|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 3445789999999999999875 6999999999999999974322 2345678899999999999999999999999998
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee----ce--eEEEEEEcCCC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE----GV--RVNCLWCRSDG 443 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~--~v~~l~~s~~g 443 (604)
+|++||+.++.....+. +|...|.+++|+|++++|++|+.|++|++||..+....... +| .|.+++|+|++
T Consensus 453 --~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 453 --ELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp --EEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred --cEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 89999999999888776 78899999999999999999999999999999765544432 23 59999999987
Q ss_pred --CEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE
Q psy10566 444 --KSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI 520 (604)
Q Consensus 444 --~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i 520 (604)
..+++++.|+.|++||+++......+ .|...|.+++|+|+++++++++.|+.|++||+++++.+..+..+. .+
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~----~v 605 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS----VI 605 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS----CE
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC----cE
Confidence 57999999999999999987655444 578899999999999999999999999999999998887776543 35
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-------------------CCeeEEEEcCCCCcEEEEEeCC
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT-------------------RTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-------------------~~V~~v~~sp~~~~~l~s~s~D 581 (604)
.++.++|++.++++++ ++.|+|||+.+++.+..+..+. ..+++++|+|+ +.+|+||+.|
T Consensus 606 ~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd-g~~l~sgs~D 683 (694)
T 3dm0_A 606 HALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD-GSTLFSGYTD 683 (694)
T ss_dssp EEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT-SSEEEEEETT
T ss_pred EEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC-CCEEEEEcCC
Confidence 5566779998887775 5569999999998888775432 13789999999 8999999999
Q ss_pred CcEEEECCCC
Q psy10566 582 CTVRIWGPHL 591 (604)
Q Consensus 582 g~I~iW~~~~ 591 (604)
|+|+||++..
T Consensus 684 g~i~iW~i~~ 693 (694)
T 3dm0_A 684 GVIRVWGIGR 693 (694)
T ss_dssp SEEEEEEC--
T ss_pred CeEEEEeccC
Confidence 9999999853
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.3e-37 Score=331.60 Aligned_cols=285 Identities=26% Similarity=0.399 Sum_probs=255.1
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+.+..+.+|...|.+++|+|++++|++++.|+.|++|+.. ......+.+|...|.+++|+|+++.+++++.|+
T Consensus 252 ~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~- 325 (577)
T 2ymu_A 252 GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-----GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK- 325 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCC-
Confidence 46678899999999999999999999999999999999975 345677889999999999999999999999998
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
.|++||...... ..+. .|...|.+++|+|+++.+++++.|+.|++||.+++.+..+.++ .|.+++|+|+++++++
T Consensus 326 -~i~~w~~~~~~~-~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 402 (577)
T 2ymu_A 326 -TVKLWNRNGQHL-QTLT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIAS 402 (577)
T ss_dssp -CEEEEETTSCEE-EEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred -eEEEEeCCCCee-EEEe-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 899999876554 3343 6788999999999999999999999999999999988888776 6999999999999999
Q ss_pred EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCC
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
++.|+.|++||...........+...|.+++|+|+++++++++.|+.|++||. +++.+..+.+|...+ .++.++|+
T Consensus 403 ~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v---~~~~~spd 478 (577)
T 2ymu_A 403 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV---RGVAFSPD 478 (577)
T ss_dssp EETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCE---EEEEECTT
T ss_pred EeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCE---EEEEEcCC
Confidence 99999999999766555556668899999999999999999999999999996 567788888888754 44566899
Q ss_pred CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 529 QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 529 ~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+++|++++.|+.|++||. +++++..+.+|...|++++|+|+ +.+|++++.||.|++||..
T Consensus 479 ~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEEEEEeCC
Confidence 999999999999999995 68889999999999999999999 8899999999999999964
No 25
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-37 Score=304.85 Aligned_cols=287 Identities=16% Similarity=0.112 Sum_probs=247.5
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+..+.+.+|.+.|++++| |++.+|++|+.||.|++||+. .......+..|...|.+++|+|+++++++++.++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD----DQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES----SSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC----CCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 34678899999999999999 999999999999999999998 5566777888999999999999999999999998
Q ss_pred ceEEEEEECCCc---eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcC-CC
Q psy10566 370 CHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRS-DG 443 (604)
Q Consensus 370 ~~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~-~g 443 (604)
.|++|++... .....+ ..|...|.+++| +++.+++++.||.|++|| .++....+..+ .+.++.+.+ ++
T Consensus 82 --~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 82 --MINGVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp --CEEEEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTT
T ss_pred --eEEEEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCC
Confidence 8999998764 334444 368889999999 578999999999999999 66666666554 688999888 99
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
+.+++++.|+.|++||...........+...+.+++++|++. +++++.|+.|++||+++++.+..+.+|...+. .+
T Consensus 156 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~---~~ 231 (313)
T 3odt_A 156 NKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY---CI 231 (313)
T ss_dssp TEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEE---EE
T ss_pred CEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEE---EE
Confidence 999999999999999954433333333788999999999998 99999999999999999999999998887544 44
Q ss_pred eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 524 FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
.++|++ .+++|+.||.|++||+.+++++..+..|...|.+++|+|+ +. +++++.||.|++|++.+++.
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN-GD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT-SC-EEEEETTSCEEEEESCGGGC
T ss_pred EEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC-CC-EEEEeCCCcEEEEeCCCCce
Confidence 556888 5889999999999999999999999999999999999999 55 66799999999999987653
No 26
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.1e-36 Score=303.28 Aligned_cols=251 Identities=17% Similarity=0.272 Sum_probs=220.7
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEE
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFY 417 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 417 (604)
....++.+|.+.|.+++|+|++++|++++.|+ +|++||+.++.....+. .|..+|.+++|+|+++++++|+.|+.|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg--~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSG--RVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCC--cEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 34577889999999999999999999999998 89999999999888776 6778899999999999999999999999
Q ss_pred EEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECC-CCCEEEEEe
Q psy10566 418 QCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDA-TDRLALLNV 491 (604)
Q Consensus 418 iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~-~~~~l~~~~ 491 (604)
+||+ +++.+..+.+| .|.+++|+|+++++++++.|++|++||+++... .....|...|.+++|+| ++..+++++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999 57888888777 699999999999999999999999999987632 23445788999999999 678999999
Q ss_pred cCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 492 STQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 492 ~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.|++|++||++++.....+..+ ...+..+.. ...+++.+|++|+.||+|++||+++++++.++.+|...|.+++|+|+
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDY-YPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEE-CCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEE-EEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence 9999999999988777666543 344444332 22358889999999999999999999999999999999999999999
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|+||+.||+|++||+.+++
T Consensus 240 -~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 240 -LPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp -SSEEEEEETTSCEEEEETTTCC
T ss_pred -CCEEEEEcCCCeEEEEECCCCc
Confidence 7899999999999999998865
No 27
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.1e-37 Score=312.21 Aligned_cols=290 Identities=15% Similarity=0.148 Sum_probs=242.7
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+..|.++|++++|+|++++||+|+.|+.|+|||+. .........+.+|...|.+++|+|++++|++++.|+ .|++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--~i~v 78 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR--NAYV 78 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEE--TTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS--CEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC--CCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC--eEEE
Confidence 345699999999999999999999999999999998 333447888899999999999999999999999998 8999
Q ss_pred EECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe----eeee-ec--eeEEEEEEcCCCCEEE
Q psy10566 376 WNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV----LDSW-EG--VRVNCLWCRSDGKSVL 447 (604)
Q Consensus 376 wd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~-~~--~~v~~l~~s~~g~~l~ 447 (604)
||+.+++...... ..|...|.+++|+|+++++++++.|+.|++||++... .... .. ..+.+++|+|+++.++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 9999887554432 4678899999999999999999999999999995322 2333 22 3799999999999999
Q ss_pred EEeCCCeEEEEEcC------------------CCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 448 AADTHHRIRTYNFE------------------HLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 448 ~~~~dg~I~i~d~~------------------~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
+++.|+.|++||+. .......+ .+...+.+++|+|++.++++++.|+.|++||+++++.+.
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 99999999999964 23333323 567889999999999999999999999999999999999
Q ss_pred EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC--Cc--------------------------------ce--
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR--EL--------------------------------PI-- 552 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~--~~--------------------------------~~-- 552 (604)
.+..|...+. .+.++|++.++++| .||.|++|++.+ ++ ..
T Consensus 239 ~~~~~~~~v~---~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (372)
T 1k8k_C 239 TLASETLPLL---AVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGS 314 (372)
T ss_dssp EEECSSCCEE---EEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-----
T ss_pred EEccCCCCeE---EEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccC
Confidence 9998876544 44556899988888 999999999987 42 00
Q ss_pred ----EEe-eCCCCCeeEEEEcCCCC---cEEEEEeCCCcEEEECCCCCC
Q psy10566 553 ----ATL-SGHTRTVSCVAWNPVYH---QMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 553 ----~~l-~~h~~~V~~v~~sp~~~---~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
..+ .+|.+.|++++|++.++ .+|+||+.||.|++|++.+++
T Consensus 315 ~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 315 AAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp ----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 223 48999999999875536 899999999999999987643
No 28
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=313.27 Aligned_cols=294 Identities=13% Similarity=0.180 Sum_probs=240.6
Q ss_pred CccceeecccCCCcEEEEEEcCCCCe-EEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC---CCeE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLK-LATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD---SSHL 362 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~-lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd---~~~l 362 (604)
|....+.+.+|.+.|++++|+|++.. +++|+. ||.|+|||+. +....... ..+|...|.+++|+|+ +.+|
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~--~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQ--HGDLKLLR-EIEKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEEC--SSSEEEEE-EEEESSCEEEEECTTCCTTTCCE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCC--CCccccee-eecccCcEEEEEEcCCCCCCceE
Confidence 33445667899999999999999964 456665 9999999998 22322222 2368999999999999 6999
Q ss_pred EEEeCCCceEEEEEECCCce-EEEEecCCCCCCeEEEEE------ecCCCEEEEEecCCeEEEEEcCC-C-eeeeeece-
Q psy10566 363 LVVGPEDCHELWVWNIETEL-LRVKLNHSPEDSLTSCSW------NRDGTKFVCGGIRGQFYQCDIEG-Q-VLDSWEGV- 432 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~dg~i~iwd~~~-~-~~~~~~~~- 432 (604)
++++.|+ .|++||+.++. ....+. .|...|.+++| +|+++.|++++.||.|++||+.. . .+..+..+
T Consensus 84 ~~~~~dg--~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 84 ATGDFGG--NLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp EEEETTS--CEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred EEecCCC--eEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 9999998 89999999887 555555 78889999954 67999999999999999999953 3 45555321
Q ss_pred -----eEEEEE----EcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC---CCCEEEEEecCCeEEEEe
Q psy10566 433 -----RVNCLW----CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA---TDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 433 -----~v~~l~----~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~I~lwd 500 (604)
.+.+++ |+++++.+++++.|+.|++||+++........+...+.+++|+| ++.++++++.||.|++||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred CCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 577887 78999999999999999999999988777777889999999999 999999999999999999
Q ss_pred cCCCceeeEee-----ccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCC-------------------cceEEe
Q psy10566 501 LRDRILLRKFQ-----GVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRE-------------------LPIATL 555 (604)
Q Consensus 501 ~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~-------------------~~~~~l 555 (604)
+++++....+. +|...+. .+.++|++. ++++|+.||.|++||+.++ +++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 241 MRTQHPTKGFASVSEKAHKSTVW---QVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEETTTEEEEEEEECCSSCEE---EEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred CcCCCcccceeeeccCCCcCCEE---EEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 99887776665 6766444 455568888 8999999999999999854 457788
Q ss_pred eCCCCCeeEEEEcCCCCcEEE-EEeCCCcEEEECCCCCC
Q psy10566 556 SGHTRTVSCVAWNPVYHQMIA-SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 556 ~~h~~~V~~v~~sp~~~~~l~-s~s~Dg~I~iW~~~~~~ 593 (604)
.+|...|++++|+|+ +.+|+ +++.||.|++|++.+..
T Consensus 318 ~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 318 TLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp ECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC--
T ss_pred ccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCcc
Confidence 899999999999999 55565 89999999999998653
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-36 Score=304.05 Aligned_cols=282 Identities=13% Similarity=0.185 Sum_probs=243.2
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec--cCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE--GHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~--~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
..+|.+.|++++|+|++++|++++ ||.|++||+..... ......+. +|...|.+++|+|+++++++++.++ .|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~ 122 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS--TLS 122 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS--EEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc-eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC--cEE
Confidence 347999999999999999999998 99999999974321 11223333 7899999999999999999999998 899
Q ss_pred EEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEE
Q psy10566 375 VWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 375 vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~ 449 (604)
+||+.+++ ....+. .|...|.+++|+|+++++++++.||.|++||+. ++.+..+..+ .+.+++++|+++.++++
T Consensus 123 ~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE
Confidence 99999887 333343 577889999999999999999999999999995 5666666654 79999999999999999
Q ss_pred eCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
+.|+.|++||+++.+......+...+.+++|+|+++++++++.++.|++||+++++.. .+..|... +..+.++|++
T Consensus 202 ~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~---v~~~~~~~~~ 277 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESC---VLSLKFAYCG 277 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSC---EEEEEECTTS
T ss_pred ecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccc---eeEEEECCCC
Confidence 9999999999999887777788899999999999999999999999999999988654 45566664 4445567999
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+++++++.||.|++||+.+++.+... .|...|.+++|+|+ +.+|++++.||.|++|++
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVD-DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTT-SCEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCC-CCEEEEecCCCeEEEEEE
Confidence 99999999999999999999887554 48889999999999 889999999999999986
No 30
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.6e-37 Score=311.75 Aligned_cols=283 Identities=16% Similarity=0.217 Sum_probs=234.5
Q ss_pred ecccCCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCC----CCeE
Q psy10566 296 VLNDHCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPD----SSHL 362 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd----~~~l 362 (604)
...+|.+.|++++|+|+ ...+++++.++.|+|||+.. ...+..+. .|...|.+++|+|+ +.+|
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS----QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG----GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC----CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 45589999999999984 34566666677999999982 22223333 26688999999999 6689
Q ss_pred EEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeee---ece--eEE
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSW---EGV--RVN 435 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~---~~~--~v~ 435 (604)
++++.|+ .|++||+.+++.+..+. .|...|.+++|+| ++.+|++++.||.|++||+. ++.+..+ .++ .|.
T Consensus 89 ~~~~~dg--~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 89 AVAGSRG--IIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp EEEETTC--EEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEE
T ss_pred EEecCCC--EEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCcee
Confidence 9999998 89999999999888776 6889999999999 99999999999999999995 5666665 333 799
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-----------------------------CCCCeeEEEECCCCCE
Q psy10566 436 CLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-----------------------------EDHPVMSFTIDATDRL 486 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-----------------------------~~~~i~~~~~s~~~~~ 486 (604)
+++|+|+++.+++++.|+.|++||+++......+. +...|.+++|+ +++
T Consensus 166 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred EEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 99999999999999999999999998765433222 77889999998 779
Q ss_pred EEEEecCCeEEEEecCCCce--------------eeEeeccccceEEEEeeeCCCC--CcEEEEEeCCCcEEEEeCCCCc
Q psy10566 487 ALLNVSTQGVHLWDLRDRIL--------------LRKFQGVTQGQFTIHSCFGGAN--QDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~~~~~--------------~~~~~~~~~~~~~i~~~~~~~~--~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
+++++.|+.|++||+.++.. +..+.+|... +..+.++|+ +++|++|+.||.|++||+.+++
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD---IWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC---SSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc---EEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 99999999999999988644 5566666654 334556677 9999999999999999999886
Q ss_pred ce----EEeeCC--CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 551 PI----ATLSGH--TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 551 ~~----~~l~~h--~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+. ..+.+| ...|++++|+|+ +.+|++++.||.|++||+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRD-SSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTT-SSEEEEEETTSEEEEEEC--
T ss_pred CccccceEEcccccCCceEEEEeCCC-CCeEEEEeCCCEEEEEEecC
Confidence 54 477887 799999999999 89999999999999999853
No 31
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-36 Score=310.07 Aligned_cols=278 Identities=18% Similarity=0.240 Sum_probs=243.8
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
+|.+.|++++|+|++++|++|+.||.|++||. .......+.+|...|.+++|+|++++|++++.++ .|++||+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~ 178 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN--VTILWNV 178 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEET-----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC--CEEEEET
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCC--eEEEEEC
Confidence 37889999999999999999999999999994 3456778889999999999999999999999998 8999999
Q ss_pred CCceEEEEecCCCCCC---------------eEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEc
Q psy10566 379 ETELLRVKLNHSPEDS---------------LTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCR 440 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s 440 (604)
.+++....+.. +... +.+++|+|++ .+++++.+|.|++||+. ++.+..+..+ .+.+++|+
T Consensus 179 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 179 ISGTVMQHFEL-KETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp TTTEEEEEECC-C---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred CCCcEEEEeec-cccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 99998887763 3344 8999999975 58899999999999995 4555556554 79999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEE
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
|+++.+++++.|+.|++||+.+......+. +...+.+++|+|++ .+++++.|+.|++||+++++.+..+..|...+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i-- 333 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI-- 333 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE--
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE--
Confidence 999999999999999999999877655554 78899999999999 99999999999999999999999998887754
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc--------------------ceEEeeCCCC--CeeEEEEcCCCCcEEEE
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKREL--------------------PIATLSGHTR--TVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~--------------------~~~~l~~h~~--~V~~v~~sp~~~~~l~s 577 (604)
..+.++|++++|++|+.||.|++||+.+++ ++..+.+|.. .|++++|+|+ +.+|++
T Consensus 334 -~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~ 411 (425)
T 1r5m_A 334 -FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA-GNKISV 411 (425)
T ss_dssp -EEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT-SSEEEE
T ss_pred -EEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC-CceEEE
Confidence 445567999999999999999999999888 8899999976 9999999999 789999
Q ss_pred EeCCCcEEEECCC
Q psy10566 578 VSDDCTVRIWGPH 590 (604)
Q Consensus 578 ~s~Dg~I~iW~~~ 590 (604)
++.||.|++|+++
T Consensus 412 ~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 412 AYSLQEGSVVAIP 424 (425)
T ss_dssp EESSSCCEEEECC
T ss_pred EecCceEEEEeec
Confidence 9999999999986
No 32
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-37 Score=316.13 Aligned_cols=285 Identities=14% Similarity=0.126 Sum_probs=226.3
Q ss_pred ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 296 VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 296 ~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+..|.+.|++++|+|+|++||+|+.|+.|+|||+. +........+.+|...|.+++|+|++++|++++.|+ +|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQD--GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR--NAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEE--TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS--SEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEcc--CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC--eEEE
Confidence 345577899999999999999999999999999998 333367788899999999999999999999999998 8999
Q ss_pred EECCCce---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC----eeeeeec-e--eEEEEEEcCCCCE
Q psy10566 376 WNIETEL---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ----VLDSWEG-V--RVNCLWCRSDGKS 445 (604)
Q Consensus 376 wd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~-~--~v~~l~~s~~g~~ 445 (604)
||+.++. ....+. .|...|.+++|+|++++|++++.|+.|++||++.. ....+.+ | .|.+++|+|++++
T Consensus 82 wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp C------CCCCEEECC-CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEcCCCCceeeeeEec-ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 9999877 444443 68889999999999999999999999999999543 3555654 4 7999999999999
Q ss_pred EEEEeCCCeEEEEEcCCC------------------cccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce-
Q psy10566 446 VLAADTHHRIRTYNFEHL------------------TDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL- 506 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~- 506 (604)
+++++.|+.|++||+... .....+.+...|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 999999999999998532 2222236788899999999999999999999999999999887
Q ss_pred ---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc--c-------------------------e----
Q psy10566 507 ---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL--P-------------------------I---- 552 (604)
Q Consensus 507 ---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~--~-------------------------~---- 552 (604)
+..+.+|...+. .+.++|++++|++|+.++.+ +|+..... . .
T Consensus 241 ~~~~~~~~~~~~~v~---~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (377)
T 3dwl_C 241 PRALITVKLSQLPLR---SLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVS 316 (377)
T ss_dssp EEECCCEECSSSCEE---EEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----
T ss_pred ceeeEeecCCCCceE---EEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccc
Confidence 788888877544 44556899999999877766 66654111 0 0
Q ss_pred -----EEe----------------eCCCCCeeEEEEcCCCCc---EEEEEeCCCcEEEECC
Q psy10566 553 -----ATL----------------SGHTRTVSCVAWNPVYHQ---MIASVSDDCTVRIWGP 589 (604)
Q Consensus 553 -----~~l----------------~~h~~~V~~v~~sp~~~~---~l~s~s~Dg~I~iW~~ 589 (604)
..+ ..|.+.|+++++.+.++. .|+|||.||.|+|||+
T Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 317 FTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp --------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 011 139999999998765334 7999999999999985
No 33
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-36 Score=315.57 Aligned_cols=294 Identities=12% Similarity=0.144 Sum_probs=238.3
Q ss_pred ccceeec-ccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCC-ce-eEeeEEeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 291 CETTQVL-NDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVT-FT-CQHRKTLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 291 ~~~~~~l-~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~-~~-~~~~~~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
.+.+..+ .+|.+.|++++|+| ++++||+|+.||+|+|||+.... .. ......+ +|...|.+++|+|++++|++++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEe
Confidence 4667778 89999999999999 99999999999999999987200 11 2123333 4999999999999999999999
Q ss_pred CCCceEEEEEECC---CceEEEEe--------cC-C--CCCCeEEEE--EecCCCEEEEEecCCeEEEEEc-CCCeeeee
Q psy10566 367 PEDCHELWVWNIE---TELLRVKL--------NH-S--PEDSLTSCS--WNRDGTKFVCGGIRGQFYQCDI-EGQVLDSW 429 (604)
Q Consensus 367 ~d~~~~i~vwd~~---~~~~~~~~--------~~-~--~~~~v~~~~--~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~ 429 (604)
.|+ .|++||+. +++..... .. . +...+.++. +++++.++++|+.||.|++||+ .++.+..+
T Consensus 131 ~dg--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 131 KDG--QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp TTS--EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCC--EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 998 89999995 44333221 11 1 455677777 5578999999999999999999 56777777
Q ss_pred ec----eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEEC----CCCCEEEEEecCCeEEEE
Q psy10566 430 EG----VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTID----ATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 430 ~~----~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s----~~~~~l~~~~~dg~I~lw 499 (604)
.+ ..|.+++|+|+++.+++++.||.|++||+++......+ .+..+|.+++++ +++.++++++.|+.|++|
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 65 37999999999999999999999999999987766544 567789999555 567899999999999999
Q ss_pred ecCCCceeeEeeccccceE-----------------------EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 500 DLRDRILLRKFQGVTQGQF-----------------------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~-----------------------~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
|+++++.+..+.++..... .+.++.++ ++++|++|+.||.|++||+.+++....+.
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 9999998888876542111 12333444 66899999999999999999999888877
Q ss_pred C-------------------------------------CCCCeeEEEEcCC-CCcEEEEEeCCCcEEEEC
Q psy10566 557 G-------------------------------------HTRTVSCVAWNPV-YHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 557 ~-------------------------------------h~~~V~~v~~sp~-~~~~l~s~s~Dg~I~iW~ 588 (604)
+ |...|++++|+++ +..+|+||+.||.|+||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 6 8899999999987 357999999999999995
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=316.02 Aligned_cols=310 Identities=14% Similarity=0.179 Sum_probs=252.9
Q ss_pred cCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeE
Q psy10566 273 LENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY 352 (604)
Q Consensus 273 ~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~ 352 (604)
.+....+|+....... +....+ .|...|++++|+|++++|++|+.||.|++|++............+.+|...|.+
T Consensus 43 ~d~~v~iw~~~~~~~~---~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~ 118 (416)
T 2pm9_A 43 TDSSLELWSLLAADSE---KPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKT 118 (416)
T ss_dssp CCCCCEEEESSSGGGC---SCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCE
T ss_pred CCCeEEEEEccCCCCC---cEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEE
Confidence 3455666765432211 122333 589999999999999999999999999999998322223467888999999999
Q ss_pred EEECCC-CCeEEEEeCCCceEEEEEECCCce------EEEEe--cCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC
Q psy10566 353 LAWSPD-SSHLLVVGPEDCHELWVWNIETEL------LRVKL--NHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE 422 (604)
Q Consensus 353 l~~spd-~~~l~s~~~d~~~~i~vwd~~~~~------~~~~~--~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~ 422 (604)
++|+|+ +.+|++++.|+ .|++||+.++. ..... ...|...|.+++|+|+ +..+++++.||.|++||++
T Consensus 119 ~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNG--EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp EEECSSSTTBEEEECSSS--CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred EEEcCCCCCEEEEEcCCC--eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 999998 89999999998 89999999876 33222 2357789999999998 7899999999999999995
Q ss_pred -CCeeeeeec--------eeEEEEEEcCCC-CEEEEEeCCC---eEEEEEcCCC-cccccc--cCCCCeeEEEECC-CCC
Q psy10566 423 -GQVLDSWEG--------VRVNCLWCRSDG-KSVLAADTHH---RIRTYNFEHL-TDSNLL--QEDHPVMSFTIDA-TDR 485 (604)
Q Consensus 423 -~~~~~~~~~--------~~v~~l~~s~~g-~~l~~~~~dg---~I~i~d~~~~-~~~~~~--~~~~~i~~~~~s~-~~~ 485 (604)
++.+..+.. ..+.+++|+|++ ..+++++.++ .|++||+++. .....+ .+...|.+++|+| ++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC
Confidence 555555543 469999999997 6899999998 9999999985 344444 4788999999999 999
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEee--------
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATLS-------- 556 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l~-------- 556 (604)
++++++.|+.|++||+++++.+..+.+|...+.. +.++|++ .++++++.||.|++||+.++.......
T Consensus 277 ~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~---~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 277 LLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK---TKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp CEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC---EEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------
T ss_pred eEEEEeCCCCEEEeeCCCCccceeecCCCCceEE---EEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccC
Confidence 9999999999999999999999999988875444 4557888 899999999999999998765433221
Q ss_pred ---------------------------CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 557 ---------------------------GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 557 ---------------------------~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.|..++++++|+|+ +.+|++++.||+|+||++.+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFG-GKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCCEEETT-TEEECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccceEEeeC-CeEEEEeCCCCeEEEEEeccC
Confidence 16678889999999 899999999999999999864
No 35
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=297.54 Aligned_cols=264 Identities=19% Similarity=0.265 Sum_probs=231.2
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+++.|....+|+.... .......+.+|...|.+++|+|++.++++|+.|++|++||+. ..+.+..+..|...
T Consensus 53 tgs~D~~v~vW~~~~~----~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~----~~~~~~~~~~~~~~ 124 (321)
T 3ow8_A 53 TGSLDDLVKVWKWRDE----RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE----NGKQIKSIDAGPVD 124 (321)
T ss_dssp EEETTSCEEEEEEETT----EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEECCTTC
T ss_pred EEcCCCCEEEEECCCC----CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC----CCCEEEEEeCCCcc
Confidence 4555777778875322 123456789999999999999999999999999999999998 55667888889999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~ 428 (604)
+.+++|+|++++|++++.++ .|++||+.+++....+. .+...|.+++|+|++++|++|+.||.|++||+. ++.+..
T Consensus 125 ~~~~~~spdg~~l~~g~~dg--~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATGTHVG--KVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp CCCEEECTTSSEEEEECTTS--EEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCC--cEEEEEcCCCceeEEec-CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 99999999999999999998 89999999998877776 567789999999999999999999999999994 677777
Q ss_pred eece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 429 WEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 429 ~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
+.++ .|.+++|+|+++++++++.|+.|++||+++...... ..|...|.+++|+|++.++++++.|++|++||+.+++
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 7766 699999999999999999999999999988765544 4478889999999999999999999999999999999
Q ss_pred eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 506 LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 506 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++..+.+|...+.. +.++|++++|++++.||.|++||..
T Consensus 282 ~~~~~~~h~~~v~~---v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 CVHTFFDHQDQVWG---VKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECCCSSCEEE---EEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEcCCCCcEEE---EEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999885544 4557999999999999999999963
No 36
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-35 Score=308.84 Aligned_cols=378 Identities=18% Similarity=0.276 Sum_probs=233.2
Q ss_pred CChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHH
Q psy10566 84 RTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILE 163 (604)
Q Consensus 84 ~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 163 (604)
..++|++|+|+|||+|+||.+++++|++|+++.++. ....+...++++.|+.+..+-.++.. ++
T Consensus 6 ~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~w~~~~~l~~~~~~---------------~~ 69 (410)
T 1vyh_C 6 RQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNE-ELDKKYAGLLEKKWTSVIRLQKKVME---------------LE 69 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCCCc-chhhhhhchhhhhhhheeeHHHHHHH---------------HH
Confidence 357899999999999999999999999999988764 34566778889999887764332211 00
Q ss_pred HHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhccccchHHHhhhhccCCCChhhHHHHHHHhhhcCCCCccCC
Q psy10566 164 QKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFMMCSGVEQLLERAKWDGKGSQSRTKLMDKLQSFLPPTVMLP 243 (604)
Q Consensus 164 ~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p 243 (604)
.+.-+. ..++.... + + ........|..... ....+.
T Consensus 70 ~~~~~~-------------~~~~~~~~--~-----~---------~~~~~~~~~~~~~~---------------~~~~l~ 105 (410)
T 1vyh_C 70 SKLNEA-------------KEEFTSGG--P-----L---------GQKRDPKEWIPRPP---------------EKYALS 105 (410)
T ss_dssp ---------------------------------------------------CCCCCCSS---------------CSCEEE
T ss_pred HHHHHH-------------HHHHhccC--C-----c---------cccCCccccccCCC---------------ceEeec
Confidence 000000 00000000 0 0 00000000110000 000000
Q ss_pred hhHHHHHHHHHHHHhHhcCCCCCCC---cccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEE
Q psy10566 244 PRRLQTLLSQAVDLQKYHCPYHNTK---VDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGS 320 (604)
Q Consensus 244 ~~rl~~ll~q~~~~q~~~~~~~~~~---~~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs 320 (604)
.++ ..+....+++.. ..++.|....+||... .+..+.+.+|.+.|++++|+|+|++|++|+
T Consensus 106 gh~----------~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~------~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs 169 (410)
T 1vyh_C 106 GHR----------SPVTRVIFHPVFSVMVSASEDATIKVWDYET------GDFERTLKGHTDSVQDISFDHSGKLLASCS 169 (410)
T ss_dssp CCS----------SCEEEEEECSSSSEEEEEESSSCEEEEETTT------CCCCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccC----------CcEEEEEEcCCCCEEEEEeCCCeEEEEECCC------CcEEEEEeccCCcEEEEEEcCCCCEEEEEe
Confidence 000 000111122211 1344566777787543 356688999999999999999999999999
Q ss_pred CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW 400 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 400 (604)
.|++|+|||+. ....+..+.+|...|.+++|+|++++|++++.|+ +|++||+.++.++..+. +|...|.+++|
T Consensus 170 ~D~~i~iwd~~----~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~--~i~~wd~~~~~~~~~~~-~h~~~v~~~~~ 242 (410)
T 1vyh_C 170 ADMTIKLWDFQ----GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK--TIKMWEVQTGYCVKTFT-GHREWVRMVRP 242 (410)
T ss_dssp TTSCCCEEETT----SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTS--EEEEEETTTCCEEEEEE-CCSSCEEEEEE
T ss_pred CCCeEEEEeCC----CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCC--eEEEEECCCCcEEEEEe-CCCccEEEEEE
Confidence 99999999998 5567888999999999999999999999999998 89999999999888776 68889999999
Q ss_pred ecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCC--------------------CCEEEEEeCCCeEEE
Q psy10566 401 NRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSD--------------------GKSVLAADTHHRIRT 457 (604)
Q Consensus 401 ~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~--------------------g~~l~~~~~dg~I~i 457 (604)
+|++.++++|+.|+.|++||+. ++....+.+| .|.+++|+|+ +.++++++.|+.|++
T Consensus 243 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 9999999999999999999994 5666666665 6999999996 678999999999999
Q ss_pred EEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe
Q psy10566 458 YNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 458 ~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs 536 (604)
||+.++..... ..|...|.+++|+|+++++++++.|+.|++||+.+++++..+.+|...+ .++.++|++.+|++|+
T Consensus 323 wd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v---~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV---TSLDFHKTAPYVVTGS 399 (410)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCE---EEEEECSSSSCEEEEE
T ss_pred EECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE---EEEEEcCCCCEEEEEe
Confidence 99998765544 4578899999999999999999999999999999999999999998854 4456679999999999
Q ss_pred CCCcEEEEeCC
Q psy10566 537 EDGKVYIWHVK 547 (604)
Q Consensus 537 ~dg~I~iwd~~ 547 (604)
.||+|+||+.+
T Consensus 400 ~D~~i~vW~~r 410 (410)
T 1vyh_C 400 VDQTVKVWECR 410 (410)
T ss_dssp TTSEEEEEC--
T ss_pred CCCcEEEEeCC
Confidence 99999999863
No 37
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.3e-35 Score=303.41 Aligned_cols=298 Identities=16% Similarity=0.220 Sum_probs=241.2
Q ss_pred cceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeE----E-----eccCCCCeeEEEECC-CCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRK----T-----LEGHTLGVAYLAWSP-DSS 360 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~----~-----l~~h~~~V~~l~~sp-d~~ 360 (604)
+....+.+|.+.|++++|+| ++++||+|+.||.|+|||+........... . ..+|...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 34567888999999999999 999999999999999999984322111110 0 135999999999999 778
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC---CCEEEEEecCCeEEEEEcC-CCeeeeeece--eE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD---GTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RV 434 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v 434 (604)
++++++.|+ .|++||+.++.....+. +...+.++.|++. +..+++++.||.|++||+. ++.+..+.++ .|
T Consensus 114 ~l~s~~~d~--~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 114 MFTSSSFDK--TLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp CEEEEETTS--EEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE
T ss_pred EEEEEeCCC--eEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE
Confidence 999999998 89999999999888776 5677999999984 4599999999999999995 6666666655 79
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcc-cc----------------cccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 435 NCLWCRSDGK-SVLAADTHHRIRTYNFEHLTD-SN----------------LLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 435 ~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~-~~----------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
.+++|+|++. .+++++.||.|++||++.... .. ...+...|.+++|+|+++++++++.|+.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999999 488999999999999976541 11 13467889999999999999999999999
Q ss_pred EEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcE
Q psy10566 497 HLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~ 574 (604)
++||+.+++....+..+... ...+........+..+++++.|+.|++||+.+++++..+.+|.+.|++++|+|+ +.+
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~-~~~ 348 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSN-FQE 348 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETT-TTE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCC-CCE
Confidence 99999998776554432211 011111222344556777788999999999999999999999999999999999 899
Q ss_pred EEEEeCCCcEEEECCCCCCC
Q psy10566 575 IASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~~~~~ 594 (604)
|++++.||.|++|++.+++.
T Consensus 349 l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEETTSCEEEEEECC---
T ss_pred EEEECCCCeEEEEeCCCCCc
Confidence 99999999999999998764
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-34 Score=301.38 Aligned_cols=277 Identities=18% Similarity=0.276 Sum_probs=231.9
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.++.++||++ ++||+|. |++|+|||.. ++.......+.+|...|++|+|+|+|++|++|+.|+ +|++||+.+++
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~--tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--EVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--CEEEEETTTTE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECC--CCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--eEEEEEcCCCc
Confidence 3667999986 4787775 9999999998 444444556667888999999999999999999998 89999999999
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
.+..+. +|...+.+++| ++..+++|+.|+.+++||.. ...+..+.+| .+..+.++++++.+++++.|+.+++|
T Consensus 181 ~~~~~~-~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 181 RLRNMT-SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEe-CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 888876 78888888776 46799999999999999984 4555666665 69999999999999999999999999
Q ss_pred EcCCCccc-----ccccCCCCeeEEEECCCCCEE-EE--EecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc
Q psy10566 459 NFEHLTDS-----NLLQEDHPVMSFTIDATDRLA-LL--NVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530 (604)
Q Consensus 459 d~~~~~~~-----~~~~~~~~i~~~~~s~~~~~l-~~--~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 530 (604)
+....... ....+...|.+++|+|.+..+ ++ |+.|+.|++||+.++.+...+..+.. +..+.++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~----v~~~~~~~~~~ 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ----VCSILWSPHYK 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC----EEEEEEETTTT
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc----eeeeeecCCCC
Confidence 99876432 234467889999999977544 44 34689999999999999988887654 23344457888
Q ss_pred EEEEEe--CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 531 FVASGS--EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 531 ~l~sgs--~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+++++ .||.|+|||+.+++++.++.+|.+.|++++|+|+ +.+|+||+.||+|+|||+....
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd-g~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCSS
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCCC
Confidence 887765 7999999999999999999999999999999999 8899999999999999997643
No 39
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.2e-35 Score=295.43 Aligned_cols=263 Identities=17% Similarity=0.245 Sum_probs=229.0
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
..+.|....+|+.. ....+..+..|...|.+++|+|+|++|++|+.|+.|++|++............+.+|...
T Consensus 72 s~s~Dg~v~iWd~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~ 145 (340)
T 1got_B 72 SASQDGKLIIWDSY------TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY 145 (340)
T ss_dssp EEETTTEEEEEETT------TCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSC
T ss_pred EEeCCCcEEEEECC------CCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCcc
Confidence 34446667777643 245677888999999999999999999999999999999998544445667788999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~ 428 (604)
|.++.|++++. +++++.|+ +|++||+.++.....+. +|...|.+++|+|++.++++|+.|+.|++||+ .+.....
T Consensus 146 v~~~~~~~~~~-l~s~s~d~--~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 146 LSCCRFLDDNQ-IVTSSGDT--TCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221 (340)
T ss_dssp EEEEEEEETTE-EEEEETTS--CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred EEEEEECCCCc-EEEEECCC--cEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence 99999998875 88899998 89999999999888776 68889999999999999999999999999999 5677777
Q ss_pred eece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 429 WEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 429 ~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
+.+| .|.+++|+|+++.+++++.|+.|++||++.......+.+ ...|.+++|+|+++++++|+.|+.|++||+.+
T Consensus 222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 7766 699999999999999999999999999998765554443 34799999999999999999999999999999
Q ss_pred CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 504 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
++.+..+.+|...+. ++.++|++.+|++|+.||.|+|||
T Consensus 302 ~~~~~~~~~h~~~v~---~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 302 ADRAGVLAGHDNRVS---CLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCEEEEEECCSSCEE---EEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcEeeEeecCCCcEE---EEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999988544 455679999999999999999997
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-35 Score=305.39 Aligned_cols=286 Identities=20% Similarity=0.216 Sum_probs=241.4
Q ss_pred ccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEe----CCCCc--eeEeeEEecc----------CCCCeeEEEECCCCC
Q psy10566 298 NDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDV----DPVTF--TCQHRKTLEG----------HTLGVAYLAWSPDSS 360 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~----~~~~~--~~~~~~~l~~----------h~~~V~~l~~spd~~ 360 (604)
..|.+.|++++|+|+|+ +||+|+.||.|++|++ ..... .......+.. |...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34569999999999999 9999999999999999 62221 0002333333 678999999999999
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--e----
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--R---- 433 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~---- 433 (604)
+|++++.++ .|++|| .++.....+. .|...|.+++|+|++++|++++.||.|++||+. ++.+..+..+ .
T Consensus 122 ~l~~~~~dg--~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 122 SIVTGVENG--ELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEEETTS--CEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEEeCCC--eEEEEe-CCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 999999998 899999 5666666665 688899999999999999999999999999994 5555555443 2
Q ss_pred -----------EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 434 -----------VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 434 -----------v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
+.++.+++++ .+++++.++.|++||+.+......+ .+...+.+++|+|+++++++++.|+.|++||+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 7888898875 5889999999999999987665444 57889999999999999999999999999999
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
++++.+..+.+|...+.. +.++|++ ++++++.||.|++||+.+++.+..+..|...|.+++|+|+ +.+|++++.|
T Consensus 277 ~~~~~~~~~~~~~~~i~~---~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d 351 (425)
T 1r5m_A 277 GNGNSQNCFYGHSQSIVS---ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD-GQKYAVAFMD 351 (425)
T ss_dssp SSBSCSEEECCCSSCEEE---EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT-SSEEEEEETT
T ss_pred CCCccceEecCCCccEEE---EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC-CCEEEEEECC
Confidence 999999999888775444 4556888 9999999999999999999999999999999999999999 8999999999
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
|.|++|++.++.
T Consensus 352 g~i~i~~~~~~~ 363 (425)
T 1r5m_A 352 GQVNVYDLKKLN 363 (425)
T ss_dssp SCEEEEECHHHH
T ss_pred CeEEEEECCCCc
Confidence 999999997654
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-36 Score=312.92 Aligned_cols=287 Identities=14% Similarity=0.198 Sum_probs=240.0
Q ss_pred CCCcEEEEEEcCCCC-eEEEE----------ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 300 HCDEVWFCKFSPDGL-KLATG----------SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 300 H~~~V~~v~fspdg~-~lasg----------s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
+...|.+++|+|+|+ +||+| +.|+.|+|||+...... .....+ .|...|.+++|+|++++|++++.|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d 88 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-KPIASL-QVDSKFNDLDWSHNNKIIAGALDN 88 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-SCSCCC-CCSSCEEEEEECSSSSCEEEEESS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC-cEEEEE-ecCCceEEEEECCCCCeEEEEccC
Confidence 345788999999997 99999 88999999999832111 122333 588999999999999999999999
Q ss_pred CceEEEEEECCC----ceEEEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCe-------eeee---ec--
Q psy10566 369 DCHELWVWNIET----ELLRVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQV-------LDSW---EG-- 431 (604)
Q Consensus 369 ~~~~i~vwd~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~-------~~~~---~~-- 431 (604)
+ .|++||+.+ ......+. .|...|.+++|+|+ +.++++++.||.|++||+.... .... ..
T Consensus 89 g--~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 89 G--SLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp S--CEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred C--eEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 8 899999988 33555554 78899999999998 8999999999999999995322 2222 22
Q ss_pred eeEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccccC-------CCCeeEEEECCCC-CEEEEEecCC---eEEEE
Q psy10566 432 VRVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQE-------DHPVMSFTIDATD-RLALLNVSTQ---GVHLW 499 (604)
Q Consensus 432 ~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~~-------~~~i~~~~~s~~~-~~l~~~~~dg---~I~lw 499 (604)
..+.+++|+|+ +..+++++.|+.|++||+++.+....+.. ...+.+++|+|++ .++++++.++ .|++|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 37999999999 78999999999999999998766555443 6789999999997 6899999998 99999
Q ss_pred ecCCC-ceeeEee-ccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEE
Q psy10566 500 DLRDR-ILLRKFQ-GVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 500 d~~~~-~~~~~~~-~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
|++++ .++..+. +|...+.. +.++| ++++|++++.||.|++||+.+++++..+.+|...|++++|+|+++.+|+
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~---~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILS---LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEE---EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred eCCCCCCCcEEeecCccCceeE---EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE
Confidence 99986 6677777 77775444 44567 8999999999999999999999999999999999999999999448999
Q ss_pred EEeCCCcEEEECCCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~~ 594 (604)
+++.||.|++|++.....
T Consensus 323 s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ECCSSSEEEEEESCCCCC
T ss_pred EEecCCcEEEEEccCCCC
Confidence 999999999999988763
No 42
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-34 Score=284.04 Aligned_cols=276 Identities=17% Similarity=0.261 Sum_probs=224.4
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL 383 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~ 383 (604)
+.+|+||+++ +||+| .|++|+|||+. ++.......+.+|...|++++|+|++++|++|+.|+ +|++||+++++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~--tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--EVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--EEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECC--CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--cEEEeecCCcee
Confidence 5679999986 77776 49999999998 333334445567888999999999999999999998 899999999998
Q ss_pred EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy10566 384 RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYN 459 (604)
Q Consensus 384 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d 459 (604)
+..+. +|...+.++ ++++..+++++.++.+.+|+.. ...+..+.++ .+..+.+.++++.+++++.|+.|++||
T Consensus 102 ~~~~~-~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 102 LRNMT-SHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEEE-CCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEec-CccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 88876 666666654 5567899999999999999984 3455555554 689999999999999999999999999
Q ss_pred cCCCcccc-----cccCCCCeeEEEECCCCCEEE---EEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 460 FEHLTDSN-----LLQEDHPVMSFTIDATDRLAL---LNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 460 ~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~---~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
+++.+... ...+...+.++.++|++..++ +++.++.|++||............... +..+.+.++++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~----v~~~~~~~~~~~ 254 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ----VCSILWSPHYKE 254 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC----EEEEEEETTTTE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee----eeeeeecccccc
Confidence 98765322 233577899999999876443 556789999999998877666554332 223344577777
Q ss_pred EEEEe--CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 532 VASGS--EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 532 l~sgs--~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++ .||.|+|||+.+++++.++.+|.+.|++++|+|+ +.+|+|||.||+|+|||+....
T Consensus 255 ~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd-g~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 255 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD-GATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSCEEEEETTTEEEEECCSCCC
T ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC-CCEEEEEecCCeEEEEECCCCC
Confidence 76654 7999999999999999999999999999999999 8899999999999999997643
No 43
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.4e-35 Score=296.63 Aligned_cols=298 Identities=15% Similarity=0.128 Sum_probs=244.5
Q ss_pred CCCCccceeecccCCCcEEEEEEcCC---CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEE
Q psy10566 287 EEFPCETTQVLNDHCDEVWFCKFSPD---GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363 (604)
Q Consensus 287 ~~~p~~~~~~l~~H~~~V~~v~fspd---g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~ 363 (604)
...|.+.+..+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.. ........+.+|...|.+++|+|++++|+
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--SGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--TSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--CCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 44577888899999999999999999 69999999999999999983 12333477888999999999999999999
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE--ecCCCEEEEEecCCeEEEEEcC-CCeeeeeece-eEEEEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW--NRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWC 439 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~ 439 (604)
+++.|+ .|++||+.++...... .|...|.+++| +|++.+|++++.||.|++||+. ++.+..+..+ .+.++.+
T Consensus 103 s~~~dg--~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 103 TASCDK--TAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADV 178 (368)
T ss_dssp EEETTS--EEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEE
T ss_pred EEcCCC--cEEEEEcCCCCceeec--cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEe
Confidence 999998 8999999999877754 47889999999 8899999999999999999994 5666666554 4455544
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCcccccc---cCCCCeeEEEECCCCCE----EEEEecCCeEEEEecCCC---ceeeE
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLL---QEDHPVMSFTIDATDRL----ALLNVSTQGVHLWDLRDR---ILLRK 509 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~---~~~~~i~~~~~s~~~~~----l~~~~~dg~I~lwd~~~~---~~~~~ 509 (604)
. +..+++++.++.+.+|++......... .....+.++.+.++... +++++.|+.|++||++.. ..+..
T Consensus 179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 4 558899999999999999875432211 23455666666665554 999999999999999987 56677
Q ss_pred eeccccceE---------EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 510 FQGVTQGQF---------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 510 ~~~~~~~~~---------~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
+.+|..... .+.++.++|++++|++|+.||.|++||+.+++++..+.+|...|++++|+|+ +.+|++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~s~ 335 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHN-GNIFAYASS 335 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTT-SSCEEEEEC
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCC-CCeEEEEec
Confidence 777664211 3566677899999999999999999999999999999999999999999999 899999999
Q ss_pred CCcEEEECCCCCC
Q psy10566 581 DCTVRIWGPHLNT 593 (604)
Q Consensus 581 Dg~I~iW~~~~~~ 593 (604)
|+..+.|++-..+
T Consensus 336 d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 336 YDWSKGHEFYNPQ 348 (368)
T ss_dssp CCSTTCGGGCCTT
T ss_pred ccccccccccCCC
Confidence 9877666654443
No 44
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-34 Score=328.12 Aligned_cols=292 Identities=15% Similarity=0.180 Sum_probs=256.1
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+..+.+.+|.+.|++++|+|+|++||+|+.||.|+|||+. ++.....+.+|..+|.+++|+|++++|++++.++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-- 77 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE----TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF-- 77 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECC----CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC--
Confidence 4567899999999999999999999999999999999998 5667788889999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--Ceeeeeece--eEEEEEEcC-CCCEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV--RVNCLWCRS-DGKSV 446 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~--~v~~l~~s~-~g~~l 446 (604)
.|++||+.+++....+. .|...|.+++|+|+++++++++.||.|++||++. .....+.++ .+.+++|+| ++..+
T Consensus 78 ~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred eEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 89999999999888776 6888999999999999999999999999999953 445555554 699999999 89999
Q ss_pred EEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
++++.||.|++||+.+........ +...+.+++|+| ++.++++++.||.|++||+.+++.+..+.+|...+ .+
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v---~~ 233 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV---SF 233 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE---EE
T ss_pred EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE---EE
Confidence 999999999999998766554443 347899999999 99999999999999999999999999999887754 44
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.++|+++++++|+.||.|++||..+++.+..+..|...|.+++|+|++..++++++.|+.+.+|++....
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 55679999999999999999999999999999999999999999999954443444456678889876543
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.8e-35 Score=304.93 Aligned_cols=300 Identities=14% Similarity=0.174 Sum_probs=242.9
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+|+... .+....+.+| ..+....|+|++++||+|+.||.|+|||+. .......+.+|...|.++
T Consensus 77 d~~v~i~d~~~------~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~~ 145 (420)
T 3vl1_A 77 DGHDFLFNTII------RDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN----FNLQREIDQAHVSEITKL 145 (420)
T ss_dssp TTEEEEEECCS------EETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT----SCEEEEETTSSSSCEEEE
T ss_pred CCcEEEEEecc------cceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC----CcceeeecccccCccEEE
Confidence 44555565432 2223445555 555666899999999999999999999988 556677788999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV 432 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~ 432 (604)
+|+|++++|++++.|+ .|++||+.+++....+. +|...|.+++|+|++++|++++.||.|++||+. ++.+..+..+
T Consensus 146 ~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 222 (420)
T 3vl1_A 146 KFFPSGEALISSSQDM--QLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRK 222 (420)
T ss_dssp EECTTSSEEEEEETTS--EEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBT
T ss_pred EECCCCCEEEEEeCCC--eEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecC
Confidence 9999999999999998 89999999998877775 688999999999999999999999999999995 6666666531
Q ss_pred -----eEEE---------------------EEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCC
Q psy10566 433 -----RVNC---------------------LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATD 484 (604)
Q Consensus 433 -----~v~~---------------------l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~ 484 (604)
.+.+ ++|+|+++.+++++.||.|++||+++........ +...+.+++|+|++
T Consensus 223 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (420)
T 3vl1_A 223 ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNN 302 (420)
T ss_dssp TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSC
T ss_pred CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCC
Confidence 3444 4557899999999999999999999876554443 56789999999999
Q ss_pred C-EEEEEecCCeEEEEecCCCce-eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC---------cceE
Q psy10566 485 R-LALLNVSTQGVHLWDLRDRIL-LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE---------LPIA 553 (604)
Q Consensus 485 ~-~l~~~~~dg~I~lwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~---------~~~~ 553 (604)
. ++++++.||.|++||+++++. +..+.++... .+..+++ +++++|++++.||.|++||+... ....
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~--~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 379 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT--PINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPT 379 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS--CEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCE
T ss_pred CCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC--CceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCcc
Confidence 9 999999999999999998754 7777764433 2333444 57889999999999999998863 2234
Q ss_pred EeeCCCCCeeEEEEcCCCCc---EEEEEeCCCcEEEECCCC
Q psy10566 554 TLSGHTRTVSCVAWNPVYHQ---MIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 554 ~l~~h~~~V~~v~~sp~~~~---~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.+|.+.|.+++|+|+ +. .+++++.+|.+.+|++..
T Consensus 380 ~~~~~~~~v~~~~~s~~-~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 380 FLVSNDDAVSQFCYVSD-DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EECCSSCCCCEEEEECC-SSSSCEEEEEETTTEEEEEESCC
T ss_pred EEccCCcceEEEEEccC-CCCcceEEEEcCCceEEEEeccC
Confidence 56678899999999999 56 677777899999999865
No 46
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-34 Score=287.32 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=203.7
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~~~ 371 (604)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+. .........+.+|..+|.+++|+|+ +++|++++.|+
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~--~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-- 77 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-- 77 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBC--SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT--
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecC--CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC--
Confidence 34678999999999999999999999999999999997 2234567889999999999999864 88999999999
Q ss_pred EEEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-e--eeeeece--eEEEEEEcCC
Q psy10566 372 ELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-V--LDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 372 ~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~--~~~~~~~--~v~~l~~s~~ 442 (604)
+|++||+.++. ....+ ..|...|.+++|+|+ +.+|++++.|+.|++||+... . ...+.+| .|.+++|+|+
T Consensus 78 ~v~iWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEEEEBSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred EEEEEEcCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 89999998874 33333 367888999999997 889999999999999998532 1 2233333 4666777665
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc----eeeEeeccccceE
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI----LLRKFQGVTQGQF 518 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~----~~~~~~~~~~~~~ 518 (604)
+..-. +. ....++++++++++.|+.|++||++++. ....+.+|...+.
T Consensus 157 ~~~~~-----~~-----------------------~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 157 TIEED-----GE-----------------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp C----------------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred ccccc-----cc-----------------------CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 42100 00 0012346899999999999999998765 5667888887544
Q ss_pred EEEeeeCCCC---CcEEEEEeCCCcEEEEeCCCCcc---eEEe--eCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 519 TIHSCFGGAN---QDFVASGSEDGKVYIWHVKRELP---IATL--SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 519 ~i~~~~~~~~---~~~l~sgs~dg~I~iwd~~~~~~---~~~l--~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.+.++|+ +.+|++|+.|++|+|||+.++.. ...+ .+|...|.+++|+|+ +.+||+++.||+|++|+..
T Consensus 209 ---~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 209 ---DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ---EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS-SCCEEEEETTSCEEEEEEC
T ss_pred ---EEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCC-CCEEEEEcCCCcEEEEEEC
Confidence 4555677 48999999999999999987431 2233 467889999999999 8999999999999999986
Q ss_pred CC
Q psy10566 591 LN 592 (604)
Q Consensus 591 ~~ 592 (604)
..
T Consensus 285 ~~ 286 (297)
T 2pm7_B 285 LE 286 (297)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 47
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.2e-35 Score=300.32 Aligned_cols=286 Identities=16% Similarity=0.115 Sum_probs=218.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCC-------eEEEEEeCCCCce------eEeeEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDT-------TVIIWDVDPVTFT------CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg-------~i~iwd~~~~~~~------~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+|++++|+|||++||+||.|. .|++|++...... ......+.+|...|.+++++ ++.+++++.+
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 4799999999999999997543 5999999743221 12234577888999988765 4567766432
Q ss_pred C---------ceEEEEEECCCceEEE----Eec----CCCCCCeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeee
Q psy10566 369 D---------CHELWVWNIETELLRV----KLN----HSPEDSLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDS 428 (604)
Q Consensus 369 ~---------~~~i~vwd~~~~~~~~----~~~----~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~ 428 (604)
+ ...+++|++.+..... ... ..+...+.+++|+|||+++++++ .|++|++||+. ++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 1 1279999986643211 111 12345688999999999987554 68999999995 555555
Q ss_pred eec-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc---cccCCCCeeEEEECCCCCEEEEEecCC----eEEEEe
Q psy10566 429 WEG-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN---LLQEDHPVMSFTIDATDRLALLNVSTQ----GVHLWD 500 (604)
Q Consensus 429 ~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg----~I~lwd 500 (604)
+.. ..|.+++|+|+|+++++++.+ .+.+|+..++.... ...+...+.+++|+|++..+++++.++ .+++||
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 543 379999999999999998855 56666665554322 234677899999999999999999887 688899
Q ss_pred cCCCce----eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe-eCCCCCeeEEEEcCCCCcEE
Q psy10566 501 LRDRIL----LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL-SGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 501 ~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~l 575 (604)
+..... ...+.+|... +.++.++|+|++||+|+.|++|+|||+.+++++.++ .+|...|++|+|+|+ +.+|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~---V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd-g~~l 327 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKG---ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD-STYV 327 (365)
T ss_dssp EETTEEEEEEEEEEESSCSC---EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT-SCEE
T ss_pred cccceecceeeeeecCCCCC---eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC-CCEE
Confidence 877643 3445566664 455667899999999999999999999999999875 789999999999999 8999
Q ss_pred EEEeCCCcEEEECCCCCCC
Q psy10566 576 ASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~~~~ 594 (604)
||||.|++||||++.....
T Consensus 328 aS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 328 ASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EEEETTSEEEEEECCTTTT
T ss_pred EEEeCCCeEEEEEcCCCCc
Confidence 9999999999999976543
No 48
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-34 Score=298.78 Aligned_cols=284 Identities=15% Similarity=0.230 Sum_probs=233.8
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
..+|.+.+.+.++++++..+++++.|+.|++||+. .......+.. |...|.+++|+|++++|++++.++ .|++
T Consensus 87 ~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~----~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--~i~i 160 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSNLNVVAVALERNVYVWNAD----SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--LVDI 160 (401)
T ss_dssp CTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETT----TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--CEEE
T ss_pred CCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCC----CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--eEEE
Confidence 34777765444444344668888999999999998 3333344443 889999999999999999999998 8999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeece--eEEEEEEcCCCCEEEEEeC
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEGV--RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~ 451 (604)
||+.+++....+. .|...|.+++| ++..+++++.||.|++||++ +..+..+.++ .|.+++|+|+++.+++++.
T Consensus 161 wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 161 YDVESQTKLRTMA-GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp EETTTCCEEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EECcCCeEEEEec-CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 9999999888876 78899999999 56799999999999999995 5556666665 7999999999999999999
Q ss_pred CCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEE-EEe--cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 452 HHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLAL-LNV--STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 452 dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~-~~~--~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
|+.|++||+++......+ .+...|.+++|+|++..++ +++ .|+.|++||+.+++.+..+..+. .+..+.++|
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~----~v~~~~~s~ 313 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS----QVTSLIWSP 313 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS----CEEEEEECS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC----cEEEEEECC
Confidence 999999999987655444 5788999999999875554 443 69999999999999988886433 355566789
Q ss_pred CCcEEEEE--eCCCcEEEEeCCCCcceE--EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 528 NQDFVASG--SEDGKVYIWHVKRELPIA--TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 528 ~~~~l~sg--s~dg~I~iwd~~~~~~~~--~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++++++++ +.||.|++||+.+++... .+.+|...|.+++|+|+ +.+|++++.||.|++|++.+++.
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD-GRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT-SSEEEEECTTSEEEEEECCC---
T ss_pred CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCcc
Confidence 99999994 489999999999865544 46799999999999999 89999999999999999988764
No 49
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=302.89 Aligned_cols=285 Identities=16% Similarity=0.272 Sum_probs=230.8
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC-------ceeEeeEEeccCC------------CCeeEEEECCCC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT-------FTCQHRKTLEGHT------------LGVAYLAWSPDS 359 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~-------~~~~~~~~l~~h~------------~~V~~l~~spd~ 359 (604)
.|.+.|++++|+|+|++||+|+.||.|+||++.... ........+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378999999999999999999999999999998322 2233577888998 889999999998
Q ss_pred --CeEEEEeCCCceEEEEEECCCceEE---------------------------------------EEecCCCCCCeEEE
Q psy10566 360 --SHLLVVGPEDCHELWVWNIETELLR---------------------------------------VKLNHSPEDSLTSC 398 (604)
Q Consensus 360 --~~l~s~~~d~~~~i~vwd~~~~~~~---------------------------------------~~~~~~~~~~v~~~ 398 (604)
..|++++.|+ +|++||+.++... ..+..+|...|.++
T Consensus 106 ~~~~l~s~s~d~--~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 106 NAAQFLLSTNDK--TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSSEEEEEECSS--CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CcceEEEeCCCC--eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 7899999998 8999999875442 13345788999999
Q ss_pred EEecCCCEEEEEecCCeEEEEEcC--CCeeee-------eece--eEEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCcc-
Q psy10566 399 SWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS-------WEGV--RVNCLWCRSDG-KSVLAADTHHRIRTYNFEHLTD- 465 (604)
Q Consensus 399 ~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~-------~~~~--~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~~~~- 465 (604)
+|+|++++|++| .|+.|++||++ ++.+.. +.++ .|.+++|+|++ +.+++++.||.|++||+++...
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 79999999997 333332 2233 69999999998 9999999999999999998765
Q ss_pred ---ccccc-CCC------------CeeEEEECCCCCEEEEEecCCeEEEEecCC-CceeeEeeccccceE----------
Q psy10566 466 ---SNLLQ-EDH------------PVMSFTIDATDRLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQF---------- 518 (604)
Q Consensus 466 ---~~~~~-~~~------------~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~---------- 518 (604)
...+. +.. .|.+++|+|+++++++++. +.|++||+++ ++++..+.+|.....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 33333 333 8999999999999999999 9999999997 888888888764211
Q ss_pred --EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC---------------------------------CCCCee
Q psy10566 519 --TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---------------------------------HTRTVS 563 (604)
Q Consensus 519 --~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~---------------------------------h~~~V~ 563 (604)
.+..+.++|++++|++|+.||.|++||+.+++.+ .+.+ +...|.
T Consensus 342 i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred cccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 0112455799999999999999999999988765 3332 245789
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 564 CVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.++|+|+ +.+||+++.++ +++|..+
T Consensus 421 ~~~~~p~-~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 421 HTAWHPK-ENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EEEECSS-SSEEEEECSSC-EEEEECC
T ss_pred EEEECCC-CCEEEEEecce-eeeeccc
Confidence 9999999 88999998876 7777543
No 50
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.4e-34 Score=301.98 Aligned_cols=284 Identities=15% Similarity=0.223 Sum_probs=242.6
Q ss_pred ceeecccCCCcE-EEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 293 TTQVLNDHCDEV-WFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~H~~~V-~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
....+.+|.+.| .++.| ++++|++|+.||+|++||+. +.+....+.+|...|.+++|+|++ .+++++.|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~----~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg-- 183 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDR-- 183 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTS--
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECC----CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCC--
Confidence 446788999885 66666 56799999999999999998 566788899999999999999988 899999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEe--cCCCEEEEEecCCeEEEEEcCCCe------------------------
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWN--RDGTKFVCGGIRGQFYQCDIEGQV------------------------ 425 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~------------------------ 425 (604)
+|++||+.+++....+. +|...|.+++|+ +++.++++|+.||.|++||+....
T Consensus 184 ~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp CEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 89999999999888776 688999999999 477899999999999999995321
Q ss_pred eeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 426 LDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 426 ~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
+....++.....+++++++.+++++.|+.|++||+.+.+....+ .+...|.+++|+|+++++++++.|+.|++||++++
T Consensus 263 ~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 263 VGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 33445554334455788999999999999999999987665544 47889999999999999999999999999999999
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
+.+..+.+|...+..+. + +++++++|+.||.|++||+.++....... |...+..++|+|+ +.++++++ ||.|
T Consensus 343 ~~~~~~~~h~~~v~~~~---~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~-~~~l~~~~-dg~i 414 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLR---L--SDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVS-DNILVSGS-ENQF 414 (464)
T ss_dssp EEEEEECCCSSCEEEEE---E--CSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEEC-SSEEEEEE-TTEE
T ss_pred cEEEEEeCCCCcEEEEE---E--cCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeC-CCEEEEec-CCeE
Confidence 99999999988665543 3 36899999999999999999988766654 6777888999999 78999988 8999
Q ss_pred EEECCCCCCC
Q psy10566 585 RIWGPHLNTN 594 (604)
Q Consensus 585 ~iW~~~~~~~ 594 (604)
++||+.+++.
T Consensus 415 ~iwd~~~g~~ 424 (464)
T 3v7d_B 415 NIYNLRSGKL 424 (464)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 9999998763
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.8e-34 Score=291.42 Aligned_cols=294 Identities=17% Similarity=0.215 Sum_probs=223.9
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~ 371 (604)
...+.+|.+.|++++|+|++++||+|+.||.|+|||+............+.+|...|.+++|+| ++.+|++++.|+
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-- 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-- 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS--
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC--
Confidence 3567899999999999999999999999999999999855545567888899999999999999 699999999998
Q ss_pred EEEEEECCCc---------eEEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcC-CCeeeeee---------
Q psy10566 372 ELWVWNIETE---------LLRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIE-GQVLDSWE--------- 430 (604)
Q Consensus 372 ~i~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~-~~~~~~~~--------- 430 (604)
.|++||+.++ .....+. .|...|.+++|+|+ +.++++++.||.|++||+. ++.+..+.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 8999999887 4455554 68889999999999 9999999999999999984 33332221
Q ss_pred ------ceeEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCC----CEEEEEecCC
Q psy10566 431 ------GVRVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATD----RLALLNVSTQ 494 (604)
Q Consensus 431 ------~~~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg 494 (604)
...+.++.|+|+ +..+++++.++.+.+|+...... .....|...|.+++|+|++ .++++++.||
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 126899999997 99999999999998888776653 2333578899999999998 8999999999
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE----eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG----SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg----s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.|++||++++........... .......++....++.+ .....+.+|+....+++..+.+|...|++++|+|+
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLT---NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp CEEEEEEEECC------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred eEEEEeCCCCcCccccCCccc---ceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 999999987655443332222 11112222333333333 34556777777788889999999999999999999
Q ss_pred CCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.+|++++.||.|++|++.++..
T Consensus 318 -~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 318 -GTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp -SCCEEEEETTSCEEEEEECTTSC
T ss_pred -CCEEEEecCCCcEEEEecCcCcc
Confidence 78999999999999999998754
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4e-35 Score=305.52 Aligned_cols=279 Identities=13% Similarity=0.101 Sum_probs=232.3
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
..+++++|+|+|++|++|+.||.|++||+. .......+..| ..+....|+|++++|++++.++ .|++||+.++
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~ 129 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTI----IRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEG--DIKVLDSNFN 129 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECC----SEETTTTSCSC-CEEEEEEECSSSCEEEEEETTS--CEEEECTTSC
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEec----ccceeeEEecC-CceEEEEEecCCCEEEEEECCC--CEEEEeCCCc
Confidence 345579999999999999999999999987 44444455555 4455667899999999999998 8999999998
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
.....+. .|...|++++|+|++++|++|+.|+.|++||+ +++.+..+.+| .|.+++|+|+++.+++++.|+.|++|
T Consensus 130 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 130 LQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp EEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 8776654 78899999999999999999999999999999 46777777766 79999999999999999999999999
Q ss_pred EcCCCccccccc----C---------------------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-
Q psy10566 459 NFEHLTDSNLLQ----E---------------------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG- 512 (604)
Q Consensus 459 d~~~~~~~~~~~----~---------------------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~- 512 (604)
|+++.+....+. + ...+.+++|+|+++++++++.||.|++||+++++.+..+..
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc
Confidence 999876554443 2 24455566689999999999999999999999988777654
Q ss_pred cccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcc-eEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 513 VTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELP-IATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~-~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|... +.++.++|++. +|++|+.||.|++||+++++. +..+.+ |...|+++.|. + +.+|++++.||.|++|++
T Consensus 289 ~~~~---v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 289 FTCS---CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-A-GALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TSSC---EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-T-TEEEEEETTTEEEEEEEE
T ss_pred cCCC---ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-C-CCEEEEecCCccEEEEec
Confidence 4443 44455678888 999999999999999998754 777777 67788888665 5 689999999999999999
Q ss_pred CCCC
Q psy10566 590 HLNT 593 (604)
Q Consensus 590 ~~~~ 593 (604)
....
T Consensus 364 ~~~~ 367 (420)
T 3vl1_A 364 SDPE 367 (420)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 8754
No 53
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.9e-34 Score=290.09 Aligned_cols=285 Identities=10% Similarity=0.053 Sum_probs=239.8
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCC-eEEEEeCCCceE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHE 372 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~ 372 (604)
.....+|.+.|++++|+|++++|++|+.||.|+||++...... .....+.+|...|.+++|+|+++ +|++++.++ .
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~ 80 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN-VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG--E 80 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-EEEEEEEECSSCEEEEEEEESSSEEEEEEETTS--C
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-ccceeeeecCCceEEEEECCCCCcEEEEEcCCC--e
Confidence 3455689999999999999999999999999999999843322 22345558999999999999999 999999998 8
Q ss_pred EEEEEC-CCceEEEEecCC--CCCCeEEEEEecCCCEEEEEecCCeEEEEEcC----------CCeeeeee-ceeEEEEE
Q psy10566 373 LWVWNI-ETELLRVKLNHS--PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE----------GQVLDSWE-GVRVNCLW 438 (604)
Q Consensus 373 i~vwd~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~----------~~~~~~~~-~~~v~~l~ 438 (604)
|++||+ .++.. ..+. . |...|.+++|+| +..+++++.|+.|++||+. ++.+..+. ...+.+++
T Consensus 81 i~~wd~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALT-NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp EEEECSSSSSSE-EECB-SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred EEEEEeccCCce-Eecc-ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEE
Confidence 999999 88866 3333 5 888999999999 9999999999999999984 33333333 23799999
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCC-Cccc---ccccCCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCC------cee
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEH-LTDS---NLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDR------ILL 507 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~-~~~~---~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~------~~~ 507 (604)
+++++ +++++.++.|++||+++ .... ....+...+.+++|+| +++++++++.||.|++||++.. +..
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 99988 99999999999999988 4432 2334678899999999 9999999999999999999887 777
Q ss_pred eEeecccc------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeC
Q psy10566 508 RKFQGVTQ------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 508 ~~~~~~~~------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
..+..|.. ....+.++.++|++++|++|+.||.|++||+.+++++..+.+| ...|++++ |+ +.+|++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~-~~~l~s~s~ 312 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CS-DNILCLATS 312 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--EC-SSEEEEEEE
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CC-CCeEEEEec
Confidence 88887754 1123455666799999999999999999999999999999998 99999999 88 899999999
Q ss_pred CCc-EEEECC
Q psy10566 581 DCT-VRIWGP 589 (604)
Q Consensus 581 Dg~-I~iW~~ 589 (604)
||+ .+.|..
T Consensus 313 Dg~~~~~~~~ 322 (342)
T 1yfq_A 313 DDTFKTNAAI 322 (342)
T ss_dssp CTHHHHCSSS
T ss_pred CCcccccccc
Confidence 999 777764
No 54
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.3e-34 Score=286.60 Aligned_cols=246 Identities=9% Similarity=0.023 Sum_probs=204.1
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
...|...|.+++|+|++ .|++|+.||+|+|||+..+.........+.+|...|++++|+|++++|++++.|+ +|++|
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--~i~iw 154 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--CIKVW 154 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--CEEEE
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--eEEEE
Confidence 34577889999999986 6889999999999999854433444556678999999999999999999999998 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeee----ceeEEEEEEcCC-CCEEEEE
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWE----GVRVNCLWCRSD-GKSVLAA 449 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~----~~~v~~l~~s~~-g~~l~~~ 449 (604)
|+.+++++..+. +|...|.+++|+|++. .|++++.|++|++||++ ++....+. +..+.+++|+|+ +++++++
T Consensus 155 d~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 155 DLAQQVVLSSYR-AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp ETTTTEEEEEEC-CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred ECCCCcEEEEEc-CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 999999988886 7889999999999885 78999999999999994 55555443 336899999985 5678899
Q ss_pred eCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 450 DTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 450 ~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+.|+.|++||+++.+....+ .|...|.+++|+|++ ++|++++.|++|++||+.++++. .+.+|...+ .++.|+|
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V---~~v~~sp 309 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFV---RDATWSP 309 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCE---EEEEECS
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCE---EEEEEeC
Confidence 99999999999987765544 578899999999998 57899999999999999998765 567888754 4455678
Q ss_pred CCc-EEEEEeCCCcEEEEeCCCCc
Q psy10566 528 NQD-FVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 528 ~~~-~l~sgs~dg~I~iwd~~~~~ 550 (604)
++. +|++|+.||+|++|++.+..
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCeEEEEEcCCCeEEEEECCCCC
Confidence 775 67899999999999998754
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-34 Score=288.76 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=236.7
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
|.+.|.+++|+|||++++++..++.+.+|... .........+|...|.+++|+|+++++++++ ++ .|++||+.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg--~i~iw~~~ 80 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIP----RHARQINTLNHGEVVCAVTISNPTRHVYTGG-KG--CVKVWDIS 80 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCC----SEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BS--EEEEEETT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccC----CccccceeccCCCceEEEEEecCCcEEEEcC-CC--eEEEEECC
Confidence 56789999999999999998888877777654 2233344447999999999999999999988 77 89999998
Q ss_pred CceEEEEe----cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---eeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 380 TELLRVKL----NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ---VLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 380 ~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++.....+ ...|...|.+++|+|+++++++++.||.|++||++.. ....+..+ .+.+++|+|+++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe
Confidence 76532221 1257789999999999999999999999999999643 34444444 699999999999999999
Q ss_pred CCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.++.|++||+++.+....+. +...+.+++|+|+++++++++.|+.|++||+++++.+..+.. ... +..+.++|++
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~---v~~~~~s~~~ 236 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-TSQ---IFSLGYCPTG 236 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSC---EEEEEECTTS
T ss_pred CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-CCc---eEEEEECCCC
Confidence 99999999999876655544 688999999999999999999999999999999988877653 332 4445667999
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++++.||.|++||+.+++. ..+..|...|.+++|+|+ +.+|++++.||.|++|++.+++
T Consensus 237 ~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCC-CCEEEEecCCCcEEEEECCCCe
Confidence 9999999999999999998775 467789999999999999 8899999999999999998875
No 56
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-33 Score=308.64 Aligned_cols=289 Identities=17% Similarity=0.265 Sum_probs=237.8
Q ss_pred ccceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC---CeeEEEECCC-CCeEEEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPD-SSHLLVV 365 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~spd-~~~l~s~ 365 (604)
.+....+.+|.+.|++++|+|+++ +|++++.|+.|++||+. ..+....+.+|.. .|.+++|+|+ +++++++
T Consensus 150 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 150 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP----PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT----TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEE
T ss_pred CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC----CcceeeeecccCCCCceEEEEEECCCCCCEEEEE
Confidence 346778899999999999999998 89999999999999988 6677888999999 9999999999 9999999
Q ss_pred eCCCceEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece---------
Q psy10566 366 GPEDCHELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--------- 432 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--------- 432 (604)
+.++ .|++||+.+++....+.. .|...|.+++|+ ++.++++++.|+.|++||+. ++.+..+..+
T Consensus 226 ~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 226 GSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp ETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred eCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 9998 899999999999888844 788999999999 99999999999999999985 3333222111
Q ss_pred --------------------------------------eEE---------------------------------EEEE--
Q psy10566 433 --------------------------------------RVN---------------------------------CLWC-- 439 (604)
Q Consensus 433 --------------------------------------~v~---------------------------------~l~~-- 439 (604)
.|. ++++
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~ 382 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK 382 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCS
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECC
Confidence 111 2222
Q ss_pred --------------------------------cCC--------------------------------------CCEEEEE
Q psy10566 440 --------------------------------RSD--------------------------------------GKSVLAA 449 (604)
Q Consensus 440 --------------------------------s~~--------------------------------------g~~l~~~ 449 (604)
+|+ ++.++++
T Consensus 383 ~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 462 (615)
T 1pgu_A 383 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVG 462 (615)
T ss_dssp TTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEE
T ss_pred CcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEe
Confidence 111 3334444
Q ss_pred eC-CCeEEEEEcCCCcc--cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-cccceEEEEeeeC
Q psy10566 450 DT-HHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG-VTQGQFTIHSCFG 525 (604)
Q Consensus 450 ~~-dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~~i~~~~~ 525 (604)
+. ++.|++||+.+... .....+...|.+++|+|+++++++++.|+.|++||+.+++.+..+.+ |...+ ..+.+
T Consensus 463 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v---~~~~~ 539 (615)
T 1pgu_A 463 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI---NAISW 539 (615)
T ss_dssp ETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCE---EEEEE
T ss_pred ecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCce---eEEEE
Confidence 44 55555555554433 33344678899999999999999999999999999999999988887 77654 44566
Q ss_pred CC----------CCcEEEEEeCCCcEEEEeCCCC-cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 526 GA----------NQDFVASGSEDGKVYIWHVKRE-LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 526 ~~----------~~~~l~sgs~dg~I~iwd~~~~-~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+| ++++|++|+.||.|++||+.++ +++..+.+|...|++++|+|+ +. |++++.||+|++|+++.
T Consensus 540 sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 540 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC-
T ss_pred cCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeec
Confidence 78 9999999999999999999998 789999999999999999999 67 99999999999999875
No 57
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.6e-34 Score=285.66 Aligned_cols=270 Identities=16% Similarity=0.225 Sum_probs=224.2
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
..+.|....+|+..... .....++..+.+|...|++++|+|+|++|++|+.|++|+|||+. +.+....+.+|...
T Consensus 35 s~s~D~~v~~W~~~~~~-~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~----~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 35 SASRDKTLISWKLTGDD-QKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA----TGETYQRFVGHKSD 109 (319)
T ss_dssp EEETTSEEEEEEEEEET-TEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EecCCccEEEecCCCCC-ccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC----CCCeeEEEccCCCc
Confidence 45556777788754321 11234577899999999999999999999999999999999998 55677889999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC------CCEEEEEecCCeEEEEEcC-
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD------GTKFVCGGIRGQFYQCDIE- 422 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~dg~i~iwd~~- 422 (604)
|.+++|+|++.++++++.|+ +|++||+... +...+. +|...|.++.|+|. +..+++++.|+.|++||+.
T Consensus 110 v~~~~~~~~~~~l~s~s~D~--~i~vwd~~~~-~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDK--TIKVWTIKGQ-CLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp EEEEEECTTSCEEEEEETTS--CEEEEETTSC-EEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCCC--eEEEEECCCC-eEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 99999999999999999999 8999999754 444444 68889999999984 4589999999999999995
Q ss_pred CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEe
Q psy10566 423 GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 423 ~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd 500 (604)
++....+.+| .|.+++|+|+++++++++.|+.|++||+.+.+....+....++.+++|+|++.++++++. +.+++|+
T Consensus 186 ~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~~i~v~~ 264 (319)
T 3frx_A 186 FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA-TGIKVFS 264 (319)
T ss_dssp TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET-TEEEEEE
T ss_pred chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC-CCcEEEE
Confidence 4556666665 799999999999999999999999999999887777777889999999999999988775 4599999
Q ss_pred cCCCceeeEeecccc-----ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 501 LRDRILLRKFQGVTQ-----GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 501 ~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
+..+..+..+..+.. ....+.++.++|+|++|++|+.||.|+|||+.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 265 LDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 998777666543211 1123445677899999999999999999998764
No 58
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.1e-34 Score=336.09 Aligned_cols=288 Identities=19% Similarity=0.305 Sum_probs=254.7
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
.....+.+|.+.|++++|+|+|++||+|+.||+|+|||+. +...+..+.+|...|.+++|+|+++++++++.|+
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~-- 679 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE----TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK-- 679 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECC----CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCC--
Confidence 3445788999999999999999999999999999999998 5567788999999999999999999999999998
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSV 446 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l 446 (604)
+|++||+.+++.+..+. .|...|.+++|+| ++..+++|+.||.|++||+ .++.+..+.+| .|.+++|+|+++.+
T Consensus 680 ~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eEEEEECCCCceEEEEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEE
Confidence 89999999999888886 6888999999999 5568999999999999999 46777777666 69999999999999
Q ss_pred EEEeCCCeEEEEEcCCCccccccc--------------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-
Q psy10566 447 LAADTHHRIRTYNFEHLTDSNLLQ--------------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ- 511 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~~~~~~~--------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~- 511 (604)
++++.||.|++||+.+......+. ....+.+++|+|++..+++++ ++.+.+||+.++..+..+.
T Consensus 759 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~ 837 (1249)
T 3sfz_A 759 ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHT 837 (1249)
T ss_dssp EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcC
Confidence 999999999999998765433222 133688999999999999887 6899999999998887776
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+|... +.++.++|+++++++|+.||.|++||+.++..+..+.+|.+.|++++|+|+ +..|++++.||.|++|++..
T Consensus 838 ~~~~~---v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd-g~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 838 GHHST---IQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPD-GSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp SSSSC---CCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEHHH
T ss_pred CCCCc---eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCC-CCEEEEEeCCCeEEEEEccc
Confidence 55554 344566799999999999999999999999999999999999999999999 88999999999999999754
No 59
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.1e-34 Score=288.41 Aligned_cols=264 Identities=19% Similarity=0.247 Sum_probs=199.4
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCCceE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPEDCHE 372 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~~~~ 372 (604)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+. .........+.+|...|.+++|+| ++++|++++.|+ +
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~--~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~--~ 82 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVR--NGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR--K 82 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEE--TTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS--C
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEec--CCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC--E
Confidence 3567999999999999999999999999999999997 333445778999999999999986 489999999998 8
Q ss_pred EEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-e---eeeeece--eEEEEEEcCC
Q psy10566 373 LWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-V---LDSWEGV--RVNCLWCRSD 442 (604)
Q Consensus 373 i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~---~~~~~~~--~v~~l~~s~~ 442 (604)
|++||+.++. ....+ .+|...|.+++|+|+ +.+|++|+.|+.|++||+... . ...+.+| .+.+++|+|+
T Consensus 83 v~iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp EEEECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 9999999874 34444 368889999999997 789999999999999998643 1 1222222 4666677765
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC---ceeeEeeccccceEE
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR---ILLRKFQGVTQGQFT 519 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~---~~~~~~~~~~~~~~~ 519 (604)
+.. +.+ .+... . ....++.++++++.|+.|++||++.. ..+..+.+|...
T Consensus 162 ~~~-------~~~--~~~~~----------~-----~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~--- 214 (316)
T 3bg1_A 162 VVP-------GSL--IDHPS----------G-----QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW--- 214 (316)
T ss_dssp CCC---------------CC----------S-----CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC---
T ss_pred cCC-------ccc--ccccc----------c-----cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc---
Confidence 320 000 00000 0 01123578999999999999999765 456777888775
Q ss_pred EEeeeCCCCC----cEEEEEeCCCcEEEEeCCCC---c-ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 520 IHSCFGGANQ----DFVASGSEDGKVYIWHVKRE---L-PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 520 i~~~~~~~~~----~~l~sgs~dg~I~iwd~~~~---~-~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
+..+.++|++ .+|++|+.||+|+|||+.+. . ....+..|...|.+++|+|+ +.+||+++.||+|++|+...
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~-g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT-TCCEEEEESSSCEEEEEECT
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEECC
Confidence 4445667875 89999999999999998763 1 23456678999999999999 88999999999999999764
No 60
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-33 Score=285.80 Aligned_cols=270 Identities=17% Similarity=0.228 Sum_probs=219.9
Q ss_pred ccccCccccccccCcCcC-CCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC
Q psy10566 270 DESLENVSLLVDHLCTKE-EFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL 348 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~-~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~ 348 (604)
..+.|....+|+...... .....+...+.+|.+.|++++|+|++.+|++|+.|++|+|||+. +......+.+|..
T Consensus 44 sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~----~~~~~~~~~~h~~ 119 (343)
T 2xzm_R 44 SGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR----TGTTYKRFVGHQS 119 (343)
T ss_dssp EEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT----SSCEEEEEECCCS
T ss_pred EEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC----CCcEEEEEcCCCC
Confidence 455577788888643221 12234567899999999999999999999999999999999998 5566788999999
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEe-cCCCCCCeEEEEEecCC----------CEEEEEecCCeEE
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKL-NHSPEDSLTSCSWNRDG----------TKFVCGGIRGQFY 417 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~----------~~l~s~~~dg~i~ 417 (604)
.|.+++|+|++++|++++.|+ +|++||+......... ...|...|.+++|+|++ .++++++.||.|+
T Consensus 120 ~v~~v~~sp~~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 120 EVYSVAFSPDNRQILSAGAER--EIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTS--CEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred cEEEEEECCCCCEEEEEcCCC--EEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 999999999999999999998 8999999854333222 12577889999999987 7899999999999
Q ss_pred EEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CcccccccCCCCeeEEEECCCCCEEEEEecCC
Q psy10566 418 QCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 418 iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 494 (604)
+||..++....+.+| .|.+++|+|+|+++++++.|+.|++||+.. ......+.+...|.+++|+|++.+++++ .|+
T Consensus 198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~ 276 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQ 276 (343)
T ss_dssp EEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESS
T ss_pred EEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCC
Confidence 999877777777666 699999999999999999999999999954 3344444466789999999999877655 677
Q ss_pred eEEEEecCCCceee--Eee-----------ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 495 GVHLWDLRDRILLR--KFQ-----------GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 495 ~I~lwd~~~~~~~~--~~~-----------~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
.|++||+.+++... .+. +|.. .+.++.++|+|++|++|+.||.|++|++.++
T Consensus 277 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 277 GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP---QCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC---CEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC---ceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 89999998876544 333 3333 3555677899999999999999999998764
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-35 Score=309.47 Aligned_cols=314 Identities=11% Similarity=0.095 Sum_probs=226.1
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC------CCeEEEEECCCeEEEEEeCCCCce-------e
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD------GLKLATGSKDTTVIIWDVDPVTFT-------C 337 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd------g~~lasgs~dg~i~iwd~~~~~~~-------~ 337 (604)
.+.+....+|+..... .......++.+|.+.|++++|+|+ +.+||+|+.||+|+|||+...... .
T Consensus 179 ~s~D~tI~iWd~~~~~--~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 179 EKHSSCIQIFKMNTST--LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp ---CEEEEEEEEETTT--CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred CCCCceEEEEEccCCC--CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 3445666788753321 112223567789999999999997 579999999999999999733211 1
Q ss_pred EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEE--EEecCC-CEEEEEecCC
Q psy10566 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC--SWNRDG-TKFVCGGIRG 414 (604)
Q Consensus 338 ~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~s~~~dg 414 (604)
.....+.+|...|++++|+|++ .|++|+.|+ +|++||+.++.........|...|.++ +|+|++ .+|++|+.|+
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg--tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~ 333 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSPT-TVVCGFKNG--FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG 333 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSSS-EEEEEETTS--EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS
T ss_pred CceEEEEcCCCCEEEEEecCCC-eEEEEeCCC--EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC
Confidence 1235788899999999999865 899999998 999999997743322223688999999 578887 8999999999
Q ss_pred eEEEEEcC-CCeeeeeece----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCCCEEE
Q psy10566 415 QFYQCDIE-GQVLDSWEGV----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 415 ~i~iwd~~-~~~~~~~~~~----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~ 488 (604)
+|++||++ ++.+..+.++ .+.+++|+|++..+++++.|++|++||+++.... .+..|...|.+++|+|++.+++
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEE
Confidence 99999994 4444444433 3788999999999999999999999999987653 3556889999999999999999
Q ss_pred EEecCCeEEEEecCCCceeeEeeccc--cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCCCCCeeEE
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQGVT--QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCV 565 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h~~~V~~v 565 (604)
+|+.|++|++||+..+ ....+.... .....+..+.++|+++.+ ....+ +.+|+.. ++..+.++.+|...|++|
T Consensus 414 Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~V 489 (524)
T 2j04_B 414 AGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKY-RIDSS--YEVYPLTVNDVSKAKIDAHGINITCT 489 (524)
T ss_dssp EEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEE-EECCC--CCCCC-------------CCCSCCCE
T ss_pred EEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeE-EccCC--ceecccccCCcceeeecCCCceEEEE
Confidence 9999999999998654 322221111 111134456677888855 23222 3344443 577888999999999999
Q ss_pred EEcCCC--CcEEEEEeCCCcEEEECCCCCC
Q psy10566 566 AWNPVY--HQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 566 ~~sp~~--~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|+|++ +..+|+|+.||+|+||++....
T Consensus 490 afsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 490 KWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp EECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred ECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 999994 3499999999999999987654
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-33 Score=307.15 Aligned_cols=287 Identities=15% Similarity=0.193 Sum_probs=245.7
Q ss_pred cceeecccCCCc-EEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCc------eeEeeEEeccCCCCeeEEEECCCCCeE
Q psy10566 292 ETTQVLNDHCDE-VWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTF------TCQHRKTLEGHTLGVAYLAWSPDSSHL 362 (604)
Q Consensus 292 ~~~~~l~~H~~~-V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~------~~~~~~~l~~h~~~V~~l~~spd~~~l 362 (604)
+....+.+|.+. |++++|+| ++++||+|+.||+|+|||+. ++ .......+..|..+|.+++|+|+++++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT--FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 131 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE--EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC--CCcccccccccccchhhcccccEEEEEEeCCCCEE
Confidence 678889999999 99999999 99999999999999999996 22 346778888999999999999999999
Q ss_pred EEEeCCCc--eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeeeece-----e
Q psy10566 363 LVVGPEDC--HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSWEGV-----R 433 (604)
Q Consensus 363 ~s~~~d~~--~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~~-----~ 433 (604)
++++.+.. +.|++|| ++.....+. .|...|.+++|+|++. .+++++.|+.|++||+. ++.+..+.++ .
T Consensus 132 ~~~~~~~~~~~~v~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 132 CVVGEGRDNFGVFISWD--SGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 208 (615)
T ss_dssp EEEECCSSCSEEEEETT--TCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred EEeccCCCCccEEEEEE--CCCcceeee-cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCce
Confidence 99998731 3788888 555666665 7888999999999998 89999999999999995 5666666554 6
Q ss_pred EEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccc-----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 434 VNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLL-----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 434 v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
|.+++|+|+ ++.+++++.|+.|++||+.+.+....+ .+...|.+++|+ ++.++++++.|+.|++||+++++.+
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 999999999 999999999999999999988777666 788999999999 9999999999999999999999999
Q ss_pred eEeeccccc-eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 508 RKFQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 508 ~~~~~~~~~-~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
..+..+... ...+..+.+ ++++++++|+.||.|++||+.+++++..+.+|...|++++| |+ +++++.||.|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~ 361 (615)
T 1pgu_A 288 QKWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP----LISGSYDGRIME 361 (615)
T ss_dssp EEEECCTTCGGGCEEEEEE-EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT----TEEEETTSCEEE
T ss_pred EEEcCCCCcccCceeEEEe-CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEE
Confidence 888876211 112222333 38899999999999999999999999999999999999999 75 777888888888
Q ss_pred ECCC
Q psy10566 587 WGPH 590 (604)
Q Consensus 587 W~~~ 590 (604)
|++.
T Consensus 362 w~~~ 365 (615)
T 1pgu_A 362 WSSS 365 (615)
T ss_dssp TTTT
T ss_pred EEch
Confidence 8765
No 63
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.3e-33 Score=293.92 Aligned_cols=275 Identities=23% Similarity=0.342 Sum_probs=232.8
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
....+|...|+|++| ++++|++|+.||+|++||+. +.+....+.+|...|.+++| +++++++++.|+ +|+
T Consensus 127 ~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg--~i~ 196 (435)
T 1p22_A 127 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSVLCLQY--DERVIITGSSDS--TVR 196 (435)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS----SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS--CEE
T ss_pred ecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCC----CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCC--eEE
Confidence 344567888999887 78999999999999999998 56677889999999999999 788999999998 899
Q ss_pred EEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCee---eeeece--eEEEEEEcCCCCEEEE
Q psy10566 375 VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVL---DSWEGV--RVNCLWCRSDGKSVLA 448 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~---~~~~~~--~v~~l~~s~~g~~l~~ 448 (604)
+||+.+++....+. .|...|.+++|+ +..+++|+.||.|++||+. +... ....++ .|.++.+ +++.+++
T Consensus 197 vwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s 271 (435)
T 1p22_A 197 VWDVNTGEMLNTLI-HHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS 271 (435)
T ss_dssp EEESSSCCEEEEEC-CCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred EEECCCCcEEEEEc-CCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEE
Confidence 99999999888876 688899999997 4599999999999999995 3332 344444 6888888 7899999
Q ss_pred EeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
++.||.|++||+++......+. +...+.++.+ ++.++++++.||.|++||+++++.+..+.+|...+..+ .+
T Consensus 272 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~---~~-- 344 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RF-- 344 (435)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE---EC--
T ss_pred EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE---Ee--
Confidence 9999999999999877655444 6788999988 57899999999999999999999999999988865554 33
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCc---------ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKREL---------PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~---------~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
++.++++|+.||.|++||+.++. ++..+.+|.+.|++++| + +.+|++++.||+|++||+.+...
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~-~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--D-EFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--C-SSCEEECCSSSEEEEEC------
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--C-CCEEEEEeCCCEEEEEECCCCCC
Confidence 78899999999999999997665 78899999999999999 4 67899999999999999987653
No 64
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-32 Score=289.49 Aligned_cols=276 Identities=25% Similarity=0.394 Sum_probs=240.3
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
.+.+.+|.+.|.. +++++|++|++|+.||+|++||+. +.+....+.+|...|.+++|+ ++.+++++.|+ +|
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg--~i 181 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDR--TL 181 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETT----TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTS--CE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECC----CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCC--eE
Confidence 4578899987643 355568999999999999999998 556788899999999999998 56999999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEe
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
++||+.+++....+. .|...|.+++|+ ++.+++|+.||.|++||+. ++.+..+.++ .+.++.+ +++.+++++
T Consensus 182 ~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 182 KVWNAETGECIHTLY-GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EEEETTTTEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred EEEECCcCcEEEEEC-CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 999999999888876 788899999995 5789999999999999994 7777777765 6888888 789999999
Q ss_pred CCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 529 (604)
.|+.|++||+++......+ .+...+.++.+ ++.++++++.|+.|++||+++++.+..+.+|......+. +++
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~-----~~~ 329 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-----LKD 329 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-----EET
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE-----EeC
Confidence 9999999999887665544 46788999999 789999999999999999999999999998887554442 357
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 530 DFVASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++++|+.||.|++||+.+++++..+.+ |...|++++|+ +.+|++|+.||.|++||+.+++
T Consensus 330 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 330 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCc
Confidence 7999999999999999999999999987 88899999996 4689999999999999999876
No 65
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.1e-33 Score=284.45 Aligned_cols=264 Identities=16% Similarity=0.284 Sum_probs=226.4
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC--ceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT--FTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~--~~~~~~~~l~~h~ 347 (604)
+.+.|....+||.. +.+..+.+..|...|.+++|+|+|.+||+|+.|+.+++|++.... ........+.+|.
T Consensus 81 s~s~Dg~v~vWd~~------~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~ 154 (354)
T 2pbi_B 81 SSSQDGKVIVWDSF------TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT 154 (354)
T ss_dssp EEETTSEEEEEETT------TCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred EEeCCCeEEEEECC------CCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC
Confidence 44556677778743 345567788899999999999999999999999999999986321 1123456677899
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEc-CCC
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDI-EGQ 424 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~-~~~ 424 (604)
..|.+++|+|++..|++++.|+ +|++||+++++.+..+. +|...|.+++|+| +++.|++|+.||.|++||+ .++
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~--~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDG--TCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTS--EEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEEeCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999998 89999999999888776 6888999999988 5789999999999999999 577
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
.+..+.+| .|.+++|+|++..+++++.|++|++||++.......+.. ...+.+++|+|++.++++++.|+.|++|
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 77777766 699999999999999999999999999988765444432 3478999999999999999999999999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
|+.+++.+..+.+|...+ .++.++|++++|++|+.||+|+||+
T Consensus 312 d~~~~~~~~~l~~h~~~v---~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKGSRVSILFGHENRV---STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTCSEEEEECCCSSCE---EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCceEEEEECCCCcE---EEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999998854 4456679999999999999999996
No 66
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=281.84 Aligned_cols=274 Identities=17% Similarity=0.226 Sum_probs=212.0
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
.+.|....+|+..... .........+|.+.|++++|+|+|++||+|+.|++|+||++. .........+.+|...|
T Consensus 34 ~~~D~~i~iw~~~~~~---~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~--~~~~~~~~~~~~h~~~v 108 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDS---WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN--QDDFECVTTLEGHENEV 108 (345)
T ss_dssp EETTSCEEEEEEETTE---EEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC--CC-EEEEEEECCCSSCE
T ss_pred EcCCCeEEEEEcCCCc---ceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc--CCCeEEEEEccCCCCCc
Confidence 4446667777643221 001122347899999999999999999999999999999997 33456678899999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCce---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ--- 424 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--- 424 (604)
.+++|+|++++|++++.|+ +|++||+.++. +...+ ..|...|.+++|+|++.+|++|+.|+.|++||....
T Consensus 109 ~~v~~sp~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 109 KSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp EEEEECTTSSEEEEEETTS--CEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred eEEEEeCCCCEEEEEECCC--eEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 9999999999999999998 89999998764 23333 478889999999999999999999999999999543
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc----------------cc-cCCCCeeEEEECCCCC
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN----------------LL-QEDHPVMSFTIDATDR 485 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~----------------~~-~~~~~i~~~~~s~~~~ 485 (604)
....+.+| .|.+++|+|+|++|++++.|++|++||........ .. .+...|.+++|+|++.
T Consensus 186 ~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~ 265 (345)
T 3fm0_A 186 CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG 265 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC
T ss_pred EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC
Confidence 33455555 79999999999999999999999999974321110 11 1567899999999999
Q ss_pred EEEEEecCCeEEEEecCCCce----e-----eEeeccccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 486 LALLNVSTQGVHLWDLRDRIL----L-----RKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~----~-----~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
.+++++.|+.|++|+...+.. . ....+|... +.++.++|++ .+|++|+.||+|++|++.+++....+
T Consensus 266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~---V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD---VNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC---EEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc---EeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 999999999999999876431 1 122355554 4555667877 59999999999999999988765544
No 67
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-33 Score=288.30 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=208.7
Q ss_pred cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC-----------------CCCCeEEEEEecCCCEE
Q psy10566 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS-----------------PEDSLTSCSWNRDGTKF 407 (604)
Q Consensus 345 ~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l 407 (604)
+|...|.+++|+|+|++|++++ ++ .+++|++.++.....+... +...|.+++|+|++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~--~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NK--TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BS--CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CC--cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 5999999999999999999876 44 6999999999887766522 12248999999999999
Q ss_pred EEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-C
Q psy10566 408 VCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-T 483 (604)
Q Consensus 408 ~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-~ 483 (604)
++|+.|+.|++||+. ++.+..+.+| .|.+++|+|+++.+++++.|+.|++||+++......+.+...+.+++++| +
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 218 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC
Confidence 999999999999995 5666777766 69999999999999999999999999999988777777788899999999 8
Q ss_pred CCEEEEEecCCeEEEEecCCCceeeEe-------eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC--------
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILLRKF-------QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-------- 548 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-------- 548 (604)
++++++++.|+.|++||++++..+..+ .+|... +.++.++|++++|++|+.||.|++||+.+
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~---v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS---VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC---EEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC---EEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 999999999999999999999887776 345553 44556679999999999999999999975
Q ss_pred ----CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 549 ----ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 549 ----~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+...+.+|...|.+++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCcceEEEecccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCe
Confidence 3445678899999999999999 7899999999999999998875
No 68
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.3e-34 Score=289.42 Aligned_cols=278 Identities=15% Similarity=0.202 Sum_probs=197.0
Q ss_pred EEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC----ceEEEEEECCC
Q psy10566 305 WFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED----CHELWVWNIET 380 (604)
Q Consensus 305 ~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~----~~~i~vwd~~~ 380 (604)
..+.+.+++.++.+. .+.....|++.. ....+|...|++++|+|||++|++++.+. .+.|++|+..+
T Consensus 9 sg~d~g~~~~~~~~~-g~~~~~~w~~p~--------~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~ 79 (357)
T 4g56_B 9 SGVDLGTENLYFQSN-GSSKGSAWGRPV--------TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPE 79 (357)
T ss_dssp ----------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC
T ss_pred cCCCCCccceEEecC-CCccccccCCCC--------CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCC
Confidence 345666666665544 467789999861 22346999999999999999999999743 24899999877
Q ss_pred ceEEEEec---CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeee----eeece--eEEEEEEcCCCCEEEEEe
Q psy10566 381 ELLRVKLN---HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLD----SWEGV--RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 381 ~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~----~~~~~--~v~~l~~s~~g~~l~~~~ 450 (604)
+.....+. ..|...|.+++|+|++. +++++.||+|++||+. ++... ...+| .|.+++|+|+++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs 158 (357)
T 4g56_B 80 GAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG 158 (357)
T ss_dssp ---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe
Confidence 65432221 24677899999999975 5667889999999994 33221 12233 699999999999999999
Q ss_pred CCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCC
Q psy10566 451 THHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 451 ~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
.|+.|++||+.+......+ .|...|.+++|++++. .+++++.|+.|++||+++++....+..+.... .+.++.++|+
T Consensus 159 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-~v~~v~~sp~ 237 (357)
T 4g56_B 159 KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT-IPTSVTWHPE 237 (357)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS-CEEEEEECTT
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc-cccchhhhhc
Confidence 9999999999988765554 4788999999999885 78899999999999999988877665433322 2333444565
Q ss_pred -CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 529 -QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 529 -~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++..+||+|+.||+|+|||+++++
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 67899999999999999999999999999999999999999966889999999999999998765
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-32 Score=288.16 Aligned_cols=293 Identities=22% Similarity=0.321 Sum_probs=248.1
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+|+.. ..+.+..+.+|.+.|++++|+ +.+|++|+.||+|++||+. +.+....+.+|...|.++
T Consensus 138 dg~i~vwd~~------~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 138 DNTLKVWSAV------TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE----TGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp TSCEEEEETT------TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEE
T ss_pred CCcEEEEECC------CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC----cCcEEEEECCCCCcEEEE
Confidence 4455555543 346778899999999999998 5699999999999999998 556778899999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV 432 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~ 432 (604)
+|+ ++.+++++.|+ .|++||+.+++....+. .|...|.+++| ++..+++|+.||.|++||+ .++.+..+.++
T Consensus 206 ~~~--~~~l~s~s~dg--~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 278 (445)
T 2ovr_B 206 HLH--EKRVVSGSRDA--TLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH 278 (445)
T ss_dssp EEE--TTEEEEEETTS--EEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCC
T ss_pred Eec--CCEEEEEeCCC--EEEEEECCCCcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCC
Confidence 995 56899999998 89999999999887776 67889999999 7899999999999999999 46777777665
Q ss_pred --eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
.+.++.+ ++..+++++.|+.|++||+++.+....+ .+...+.++.+ +++++++++.||.|++||+++++.+..
T Consensus 279 ~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQT 354 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 6888888 8899999999999999999987765544 45677777776 567999999999999999999999999
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEe-----eCCCCCeeEEEEcCCCCcEEEEEeCCCc-
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL-----SGHTRTVSCVAWNPVYHQMIASVSDDCT- 583 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l-----~~h~~~V~~v~~sp~~~~~l~s~s~Dg~- 583 (604)
+.++......+.++.+ +++++++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+ +.++++|+.||+
T Consensus 355 ~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~dg~~ 431 (445)
T 2ovr_B 355 LQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT-KLVCAVGSRNGTE 431 (445)
T ss_dssp ECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS-EEEEEEECSSSSS
T ss_pred EccCCCCCCCEEEEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCC-EEEEEEcccCCCC
Confidence 9873322223444443 4689999999999999999999999888 468899999999999 899999999998
Q ss_pred ---EEEECCCCC
Q psy10566 584 ---VRIWGPHLN 592 (604)
Q Consensus 584 ---I~iW~~~~~ 592 (604)
|.|||++..
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999999764
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-32 Score=274.25 Aligned_cols=252 Identities=16% Similarity=0.278 Sum_probs=219.0
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeE
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQF 416 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i 416 (604)
......+.+|...|++++|+|++++|++++.|+ .|++|+..+++....+. .|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg--~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK--LIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCC--eEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 455678899999999999999999999999998 89999999998877775 788899999999999999999999999
Q ss_pred EEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec
Q psy10566 417 YQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 417 ~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
++||+ +++.+..+.++ .|.++.|+|+++.+++++.|+.|++||+++.+....+ .+..++.+++|+|++.++++++.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999 46777777766 6999999999999999999999999999987655444 46789999999999999999999
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee--EEEEcCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS--CVAWNPV 570 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~--~v~~sp~ 570 (604)
|+.|++||+++++.+..+...... .+..+.++|+++++++++.||.|++||+.+++++..+.+|...+. ...+++.
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCC--CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CCcEEEEECCCCceeeEEeccCCC--ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 999999999999888776543322 344466789999999999999999999999999999999876543 3345544
Q ss_pred CCcEEEEEeCCCcEEEECCCCCC
Q psy10566 571 YHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++.+|++|+.||.|++||+.+++
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCC
T ss_pred CCcEEEEECCCCEEEEEECCCch
Confidence 48899999999999999998775
No 71
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.2e-33 Score=327.96 Aligned_cols=295 Identities=19% Similarity=0.265 Sum_probs=249.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d 368 (604)
.+.+..+.+|.+.|.+++|+|+|++||+|+.||+|+|||+. +.+.+..+.+|...|.+++|+| ++..+++++.|
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d 722 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA----TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND 722 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC----CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC
Confidence 46778899999999999999999999999999999999998 5567888999999999999999 45588899999
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeee-----------------
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWE----------------- 430 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~----------------- 430 (604)
+ .|++||+.++.+...+. +|...|.+++|+|+++.+++++.||.|++||+. ++....+.
T Consensus 723 ~--~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1249)
T 3sfz_A 723 F--FLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799 (1249)
T ss_dssp S--CEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred C--eEEEEECCCcchhheec-CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence 8 89999999999888776 788999999999999999999999999999984 22211110
Q ss_pred --------------------------------------c--eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-c
Q psy10566 431 --------------------------------------G--VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-L 469 (604)
Q Consensus 431 --------------------------------------~--~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~ 469 (604)
+ ..+.+++|+|+++.+++++.++.|++||+.+...... .
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 879 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR 879 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC
Confidence 1 2577899999999999999999999999998765444 3
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee-----------------------------eEeecccc-----
Q psy10566 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL-----------------------------RKFQGVTQ----- 515 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~-----------------------------~~~~~~~~----- 515 (604)
.|...|.+++|+|++.++++++.|+.|++||+.+.... ....+...
T Consensus 880 ~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 880 GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 57889999999999999999999999999997642110 00001100
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
....+.++.++|+++++++|+.||.|++||+.+++.+..+.+|...|++++|+|+ +.+|++++.||.|++|++.++.
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD-GKTLISSSEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSS-SSCEEEECSSSBEEEEETTTTE
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCc
Confidence 0112455677899999999999999999999999999999999999999999999 8899999999999999998764
No 72
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-33 Score=290.02 Aligned_cols=251 Identities=17% Similarity=0.310 Sum_probs=215.7
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
...+..++.+|.+.|++++|+|++++|++++.|+ +|++||+.++.....+. .|...|.+++|+|+++++++|+.|+.
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~--~v~iWd~~~~~~~~~~~-~h~~~v~~~~~s~~g~~las~~~d~~ 131 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDG--RLIVWNALTSQKTHAIK-LHCPWVMECAFAPNGQSVACGGLDSA 131 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTS--EEEEEETTTTEEEEEEE-CCCTTCCCCEECTTSSEEEECCSSSC
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCccceEEe-cCCCCEEEEEECCCCCEEEEeeCCCc
Confidence 4556788999999999999999999999999999 89999999999888776 67888999999999999999999999
Q ss_pred EEEEEcCCC--------eeeeeece--eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcccccc------cCCCCeeEE
Q psy10566 416 FYQCDIEGQ--------VLDSWEGV--RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPVMSF 478 (604)
Q Consensus 416 i~iwd~~~~--------~~~~~~~~--~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i~~~ 478 (604)
+++||+... ....+.+| .+.++.|.|+ +..+++++.|++|++||+.++.....+ .|...+.++
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 999998431 22334454 5788888886 457999999999999999987655433 467789999
Q ss_pred EECC-CCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 479 TIDA-TDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 479 ~~s~-~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
++++ ++.++++|+.|+.|++||++ .+..+..+.+|...+.. +.++|++++|++|+.||+|++||+++++.+..+.
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~---v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINS---VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCE---EEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEE---EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9977 88999999999999999998 45788889999886554 4557999999999999999999999999988886
Q ss_pred CCC-------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 557 GHT-------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 557 ~h~-------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+. ..|++++|+|+ +.+|++|+.||.|++||+..++
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCC
T ss_pred ccccccccccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCc
Confidence 553 24899999999 8999999999999999987654
No 73
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=275.36 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=204.8
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc--eEEEEecCC-CCCCeEEEEEecCCCEEEEEecC
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHS-PEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
.+.+..+.+|..+|.+++|+|+ +|++++.|+ +|++||+.++ .....+... |...|.+++|+|++++|++|+.|
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~--~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDR--KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSS--CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCC--EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 4567888999999999999998 999999998 8999999875 344445333 88999999999999999999999
Q ss_pred CeEEEEEcCC--------Ceeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-c---c-cccccCCCCeeEE
Q psy10566 414 GQFYQCDIEG--------QVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-T---D-SNLLQEDHPVMSF 478 (604)
Q Consensus 414 g~i~iwd~~~--------~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-~---~-~~~~~~~~~i~~~ 478 (604)
+.|++||++. +.+..+.+| .|.+++|+|+++++++++.|++|++||+... . . ..+..|...|.++
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 9999999842 344556565 6999999999999999999999999999532 1 1 2234578899999
Q ss_pred EECCCCCEEEEEecCCeEEEEecCCC--ceeeEeeccccceEEEEeeeCCCC--CcEEEEEeCCCcEEEEeCCCC-----
Q psy10566 479 TIDATDRLALLNVSTQGVHLWDLRDR--ILLRKFQGVTQGQFTIHSCFGGAN--QDFVASGSEDGKVYIWHVKRE----- 549 (604)
Q Consensus 479 ~~s~~~~~l~~~~~dg~I~lwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~sgs~dg~I~iwd~~~~----- 549 (604)
+|+|++.+|++++.|++|++||..++ +++..+.+|...+..+ .++|+ +.+|++|+.|++|++||+..+
T Consensus 160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~---~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS---DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE---EECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEE---EecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 99999999999999999999999876 6778888998865544 44576 678999999999999998764
Q ss_pred ---cceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 550 ---LPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 550 ---~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+...+.+ |...|.+++|+++ .+|++++.||+|++|+..++
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETT
T ss_pred ceeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCC
Confidence 34555655 8999999999975 48999999999999998764
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=313.07 Aligned_cols=303 Identities=9% Similarity=0.103 Sum_probs=233.0
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee---------E
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR---------K 341 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~---------~ 341 (604)
.+.+....+||... .+++..+. |.+.|++++|+|++++|++|+.||+|++||+.. ...... .
T Consensus 75 ~s~D~~v~lWd~~~------~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~--~~~~~~~i~~~~~~~~ 145 (902)
T 2oaj_A 75 INAKDTVYVLSLYS------QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR--DQLSSFKLDNLQKSSF 145 (902)
T ss_dssp EETTCEEEEEETTT------CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTT--TEEEEEEECCHHHHHT
T ss_pred EECcCeEEEEECCC------CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC--Cccccceecccccccc
Confidence 34466677787543 24455664 778999999999999999999999999999983 222111 2
Q ss_pred EeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEecCC-----------------CCCCeEEEEEecC
Q psy10566 342 TLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLNHS-----------------PEDSLTSCSWNRD 403 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~ 403 (604)
.+.+|..+|.+++|+|++ ..+++++.|+ .| +||+.+++....+... |...|.+++|+|+
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 346799999999999964 6788888887 89 9999999888776522 2467999999999
Q ss_pred CCEEEEEecCCeEEEEEcC-CCeeee--e-----e-------------ceeEEEE-------------------------
Q psy10566 404 GTKFVCGGIRGQFYQCDIE-GQVLDS--W-----E-------------GVRVNCL------------------------- 437 (604)
Q Consensus 404 ~~~l~s~~~dg~i~iwd~~-~~~~~~--~-----~-------------~~~v~~l------------------------- 437 (604)
|.+|++|+.||.|++||+. ++.+.. + + ...|.++
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 9999999999999999983 332210 0 0 0001000
Q ss_pred --------------------------------------------------------------------------------
Q psy10566 438 -------------------------------------------------------------------------------- 437 (604)
Q Consensus 438 -------------------------------------------------------------------------------- 437 (604)
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~ 382 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYP 382 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETT
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECC
Confidence
Q ss_pred -----------------------------------------------------------EEcCCCCEEEEEeCCCeEEEE
Q psy10566 438 -----------------------------------------------------------WCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 438 -----------------------------------------------------------~~s~~g~~l~~~~~dg~I~i~ 458 (604)
+|+|+++.+++++.|++|++|
T Consensus 383 ~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlW 462 (902)
T 2oaj_A 383 SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIY 462 (902)
T ss_dssp TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEE
T ss_pred CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEE
Confidence 113456678888888889999
Q ss_pred EcCCCcccc--c----------ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc---------------------
Q psy10566 459 NFEHLTDSN--L----------LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI--------------------- 505 (604)
Q Consensus 459 d~~~~~~~~--~----------~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~--------------------- 505 (604)
|+.++.... . ..|...|.+++|+|++++|++|+.||+|++||+.+++
T Consensus 463 d~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (902)
T 2oaj_A 463 DASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFS 542 (902)
T ss_dssp ESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCC
T ss_pred ECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeecc
Confidence 987764321 0 1466789999999999999999999999999998662
Q ss_pred ------------------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE-----Eee
Q psy10566 506 ------------------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-----TLS 556 (604)
Q Consensus 506 ------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-----~l~ 556 (604)
++..+.+|...+. ++.++|+| +||+|+.|++|++||++++..+. .+.
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~---svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~ 618 (902)
T 2oaj_A 543 LNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTS---AINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREIS 618 (902)
T ss_dssp GGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEE---EEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTC
T ss_pred ccCCccccccccccCCCCCCCccceeEEEEcCCCcEE---EEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhc
Confidence 3566777777544 45568999 99999999999999998877654 233
Q ss_pred -CCCCCeeEEEEc-----CCC--CcEEEEEeCCCcEEEECC
Q psy10566 557 -GHTRTVSCVAWN-----PVY--HQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 557 -~h~~~V~~v~~s-----p~~--~~~l~s~s~Dg~I~iW~~ 589 (604)
+|.+.|++|+|+ ||+ +.+|++|+.||+|++|++
T Consensus 619 ~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 619 GAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp SSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred cccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 899999999999 883 489999999999999998
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=278.80 Aligned_cols=254 Identities=19% Similarity=0.262 Sum_probs=205.6
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCC
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPED 369 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~ 369 (604)
+++.++.+|.+.|++++|+|++++||+|+.||.|+|||+. .........+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecC--CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3567889999999999999999999999999999999997 4466778889999999999999987 99999999998
Q ss_pred ceEEEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC-eeeeeeceeEEEEEEcCCCC
Q psy10566 370 CHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ-VLDSWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 370 ~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~v~~l~~s~~g~ 444 (604)
.|++||+.++. ....+. .|...|.+++|+|+ +.++++++.|+.|++||+... ....
T Consensus 80 --~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~---------------- 140 (379)
T 3jrp_A 80 --KVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP---------------- 140 (379)
T ss_dssp --CEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE----------------
T ss_pred --EEEEEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee----------------
Confidence 89999999987 444443 67888999999998 889999999999999888532 1100
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-------------CCCEEEEEecCCeEEEEecCCCc----ee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-------------TDRLALLNVSTQGVHLWDLRDRI----LL 507 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~I~lwd~~~~~----~~ 507 (604)
.....+...|.+++|+| ++.++++++.|+.|++||++++. ..
T Consensus 141 ---------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 141 ---------------------IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp ---------------------EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred ---------------------EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE
Confidence 00112344566666666 79999999999999999998764 44
Q ss_pred eEeeccccceEEEEeeeCCCC---CcEEEEEeCCCcEEEEeCCCCcc---eEEe--eCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 508 RKFQGVTQGQFTIHSCFGGAN---QDFVASGSEDGKVYIWHVKRELP---IATL--SGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~---~~~l~sgs~dg~I~iwd~~~~~~---~~~l--~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
..+.+|... +.++.++|+ +++|++++.||.|++||+.++.. ...+ ..|...|++++|+|+ +.+|++++
T Consensus 200 ~~~~~h~~~---v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~ 275 (379)
T 3jrp_A 200 STLEGHSDW---VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS-GNVLALSG 275 (379)
T ss_dssp EEECCCSSC---EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSS-SCCEEEEE
T ss_pred EEEecccCc---EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCC-CCEEEEec
Confidence 566677764 444556788 89999999999999999998642 2222 348889999999999 78999999
Q ss_pred CCCcEEEECCCC
Q psy10566 580 DDCTVRIWGPHL 591 (604)
Q Consensus 580 ~Dg~I~iW~~~~ 591 (604)
.||.|++|++..
T Consensus 276 ~dg~i~iw~~~~ 287 (379)
T 3jrp_A 276 GDNKVTLWKENL 287 (379)
T ss_dssp SSSSEEEEEEEE
T ss_pred CCCcEEEEeCCC
Confidence 999999999874
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.5e-32 Score=284.03 Aligned_cols=293 Identities=18% Similarity=0.256 Sum_probs=240.6
Q ss_pred ccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCee
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~ 351 (604)
+.+....+|+.. ..+.+..+.+|.+.|++++|+|++ +|++|+.||+|++||+. +......+.+|...|.
T Consensus 139 s~dg~i~vwd~~------~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~----~~~~~~~~~~h~~~v~ 207 (464)
T 3v7d_B 139 ADDKMIRVYDSI------NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK----KGCCTHVFEGHNSTVR 207 (464)
T ss_dssp ETTSCEEEEETT------TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEE
T ss_pred cCCCcEEEEECC------CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC----CCcEEEEECCCCCccE
Confidence 334555666643 346788899999999999999998 99999999999999998 5567888999999999
Q ss_pred EEEEC--CCCCeEEEEeCCCceEEEEEECCCceEE----------------------EEecCCCCCCeEEEEEecCCCEE
Q psy10566 352 YLAWS--PDSSHLLVVGPEDCHELWVWNIETELLR----------------------VKLNHSPEDSLTSCSWNRDGTKF 407 (604)
Q Consensus 352 ~l~~s--pd~~~l~s~~~d~~~~i~vwd~~~~~~~----------------------~~~~~~~~~~v~~~~~~~~~~~l 407 (604)
+++|+ +++.++++++.|+ .|++||+.++... .....+|...|.++ +++++++
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l 283 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDN--TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIV 283 (464)
T ss_dssp EEEEEESSSCEEEEEEETTS--CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEE
T ss_pred EEEEecCCCCCEEEEEcCCC--cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEE
Confidence 99998 5788999999998 8999999876532 22233566777766 6789999
Q ss_pred EEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCC
Q psy10566 408 VCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDAT 483 (604)
Q Consensus 408 ~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~ 483 (604)
++|+.||.|++||+ .++.+..+.++ .+.+++++|+++.+++++.|+.|++||+.+++....+ .|...|.+++++
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-- 361 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-- 361 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--
Confidence 99999999999999 46677777665 6999999999999999999999999999987765544 478899999997
Q ss_pred CCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-eeCCCCCe
Q psy10566 484 DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTV 562 (604)
Q Consensus 484 ~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V 562 (604)
+.++++++.||.|++||+.++.....+.. ... +..+.++++++++++|+ ||.|++||+.+++++.. +.+|.+.|
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v 436 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSRKFSYHH-TNL---SAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQI 436 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC-TTC---CCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEE
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeeecC-CCC---ccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcE
Confidence 58999999999999999998876655532 221 22234468999999998 89999999999999885 67789999
Q ss_pred eEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 563 SCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 563 ~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.+++|++ ..++++++.||.+.+|-
T Consensus 437 ~~v~~~~--~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 437 WSVNFKG--KTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEET--TEEEEEEEETTEEEEEE
T ss_pred EEEEecC--CEEEEEEEeCCeEEEEE
Confidence 9999983 57888888888776654
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-32 Score=308.33 Aligned_cols=201 Identities=12% Similarity=0.103 Sum_probs=171.2
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
..||.+.|++++|+|+|++||+|+.||+|+||+.. .......+ .|..+|.+++|+| +++|++++.|+ +|++|
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~----~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~--~v~lW 84 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQ----QVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKD--TVYVL 84 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECST----TCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTC--EEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCC----CcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcC--eEEEE
Confidence 45899999999999999999999999999999987 33334443 4788999999999 88999999998 89999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee------------eece--eEEEEEEcCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS------------WEGV--RVNCLWCRSD 442 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~--~v~~l~~s~~ 442 (604)
|+.+++.+..+. +...|++++|+|+++++++|+.||.|++||++...... ..+| .|.+++|+|+
T Consensus 85 d~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 85 SLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp ETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred ECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 999999887775 55789999999999999999999999999997554321 1223 6999999996
Q ss_pred -CCEEEEEeCCCeEEEEEcCCCccccccc-------------------CCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 443 -GKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 443 -g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
+..+++++.|+.| +||+++.+....+. +...|.+++|+|++.++++++.|+.|++||++
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 5789999999999 99999876544332 23679999999999999999999999999998
Q ss_pred CCceee
Q psy10566 503 DRILLR 508 (604)
Q Consensus 503 ~~~~~~ 508 (604)
+++++.
T Consensus 242 ~g~~~~ 247 (902)
T 2oaj_A 242 SGHMIM 247 (902)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 887654
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.7e-31 Score=295.12 Aligned_cols=270 Identities=15% Similarity=0.218 Sum_probs=223.0
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.+.|....+|+..... .......+.+.+|.+.|.+++|+|+|++|++|+.||+|+|||+. .......+.+|...
T Consensus 400 s~s~D~~i~~W~~~~~~-~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~----~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDD-KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA----AGVSTRRFVGHTKD 474 (694)
T ss_dssp EEETTSEEEEEECCCST-TCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EEeCCCcEEEEEccCCC-cccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC----CCcceeEEeCCCCC
Confidence 34456667777754322 12234567899999999999999999999999999999999998 55667889999999
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec--CCCCCCeEEEEEecCC--CEEEEEecCCeEEEEEcC-CC
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN--HSPEDSLTSCSWNRDG--TKFVCGGIRGQFYQCDIE-GQ 424 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~-~~ 424 (604)
|.+++|+|++++|++++.|+ +|++||........... .+|...|.+++|+|++ ..+++++.|+.|++||++ ++
T Consensus 475 v~~~~~s~~~~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDR--TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp EEEEEECTTSSCEEEEETTS--CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred EEEEEEeCCCCEEEEEeCCC--EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999998 89999987654433322 3577889999999987 589999999999999995 56
Q ss_pred eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 425 VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 425 ~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
....+.+| .|.+++|+|+++++++++.|+.|++||+.+.+....+.....+.+++|+|++.++++++ ++.|++||++
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETT
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECC
Confidence 66777766 69999999999999999999999999999988777777788899999999998777665 5669999999
Q ss_pred CCceeeEeeccccc----------------eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 503 DRILLRKFQGVTQG----------------QFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 503 ~~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++..+..+..+... ...+.++.++|+|++|++|+.||.|+|||+.
T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 632 SKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 99888777543211 1124556778999999999999999999985
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-32 Score=286.21 Aligned_cols=270 Identities=14% Similarity=0.241 Sum_probs=223.2
Q ss_pred EEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEECCC---ce
Q psy10566 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIET---EL 382 (604)
Q Consensus 308 ~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~---~~ 382 (604)
.|+|++..+++++ .|+.. ++.+..+ .+|...|++++|+| ++++|++++.|+ +|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~------~w~~~-----g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg--~v~vwd~~~~~~~~ 100 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR-----GKLIATLMENEPNSITSSAVSPGETPYLITGSDQG--VIKIWNLKEIIVGE 100 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC-----CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTS--EEEEEEHHHHHTTC
T ss_pred hcCCccccccccc------ccccc-----ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCc--eEEEeECcccccCc
Confidence 4788998888765 38753 4567777 88999999999999 999999999998 899999877 43
Q ss_pred ---EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc----CCCeeeeeeceeEEEEE----------------E
Q psy10566 383 ---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI----EGQVLDSWEGVRVNCLW----------------C 439 (604)
Q Consensus 383 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~----~~~~~~~~~~~~v~~l~----------------~ 439 (604)
....+ .|...|.+++|+|++++|++|+.||.|++||+ .++.......+.+..+. +
T Consensus 101 ~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 101 VYSSSLTY--DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp CCSCSEEE--ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred ccceeeec--cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 22222 47889999999999999999999999999998 46666655555555554 4
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee-cccc
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-GVTQ 515 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~-~~~~ 515 (604)
++++..+++++.|+.|++||+++.+....+. +...|.+++|+|++.++++++.||.|++||+++++++..+. .+..
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 4679999999999999999999887665554 57899999999999999999999999999999999988876 5555
Q ss_pred ceEEEEee-eCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC--------------------------CCCeeEEEEc
Q psy10566 516 GQFTIHSC-FGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH--------------------------TRTVSCVAWN 568 (604)
Q Consensus 516 ~~~~i~~~-~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h--------------------------~~~V~~v~~s 568 (604)
.+..+... .+++++.+|++|+.||.|++||+.+++.+..+.+| ...|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 44444332 56678999999999999999999999988887654 4558888888
Q ss_pred CCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 569 PVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 569 p~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+ +.+|++|+.||.|++||+.+++.
T Consensus 339 -~-~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 339 -N-DKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp -T-TEEEEEEGGGTEEEEEETTCGGG
T ss_pred -C-ceEEEecCCCCeEEEEECCCccc
Confidence 5 68999999999999999988763
No 80
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.8e-31 Score=266.84 Aligned_cols=282 Identities=9% Similarity=0.092 Sum_probs=213.9
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE-EeCCCce
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV-VGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s-~~~d~~~ 371 (604)
++..+.+|.+.|++++|+|||++||+|+.++ ++||+++ ......... ...+..+++.++++.++. ++.++
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~-- 81 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVH----PVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKE-- 81 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEET----TEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTT--
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecC----Ccceeeeee--cCCeEEEEEcCCCCEEEEEECCcc--
Confidence 3456788999999999999999999998665 7899988 333333322 235888999999988855 45555
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--CeeeeeeceeEEEEEEcCCCCEEEE-
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGVRVNCLWCRSDGKSVLA- 448 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~v~~l~~s~~g~~l~~- 448 (604)
+|++||..+++.+..+. +...|.+++|+++. ++++ .++.|++||+.. +.+..+.. ....+++++ ..+++
T Consensus 82 ~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK--VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp EEEEEETTTTEEEEEEE--CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEET--TEEEEE
T ss_pred EEEEEECCCCcEEEEEE--CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEc--cEEEEe
Confidence 89999999999888876 55689999998764 3333 488999999953 45555555 555566777 55665
Q ss_pred -EeCCCeEEEEEcCCCc-----------------ccccccCCCCeeEEEECCCCCEEEEEecCCe-EEEEecCCCceeeE
Q psy10566 449 -ADTHHRIRTYNFEHLT-----------------DSNLLQEDHPVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRK 509 (604)
Q Consensus 449 -~~~dg~I~i~d~~~~~-----------------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-I~lwd~~~~~~~~~ 509 (604)
++.+|.|++||+.+.. ...+..|..+|.+++|+|+++++++++.|++ |++||+++++.+..
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 5889999999998754 3445668899999999999999999999998 99999999999999
Q ss_pred ee-c-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc--eEEee---------------------CCCCCeeE
Q psy10566 510 FQ-G-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP--IATLS---------------------GHTRTVSC 564 (604)
Q Consensus 510 ~~-~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~--~~~l~---------------------~h~~~V~~ 564 (604)
+. + |... +.++.++|++++|++|+.|++|+|||+..+.. ...+. .+......
T Consensus 234 ~~~g~h~~~---v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (355)
T 3vu4_A 234 FRRGLDRAD---VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCK 310 (355)
T ss_dssp EECTTCCSC---EEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCE
T ss_pred EEcCCCCCc---EEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceE
Confidence 98 5 7664 44566689999999999999999999976531 11111 11223477
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEECCCCCCCC
Q psy10566 565 VAWNPVYHQMIASVSDDCTVRIWGPHLNTNK 595 (604)
Q Consensus 565 v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~~ 595 (604)
++|+|+ +..+++++.||.+++|++..+...
T Consensus 311 ~a~~~d-~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 311 IAWISE-SSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp EEESSS-SEEEEEETTTTEEEEEEEEEETTT
T ss_pred EEEeCC-CCEEEEEeCCCeEEEEEEEcCCCC
Confidence 999999 889999999999999998776543
No 81
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=282.39 Aligned_cols=259 Identities=10% Similarity=0.003 Sum_probs=207.8
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
-...|.+++|||||+++||++.|++|+ |.. .. ..+.+|...|.+++|+|+| .++ .+.+|+
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~----~~---~~l~gh~~~v~~V~FsPdg-------~~~--~~~~~~-- 73 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPK----YA---KDINCNSKNLFHVKEFPLE-------FEN--KLDFEL-- 73 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EEC----CC---SCCSSBGGGTEEEEEECCC-------CCC--TTTTSC--
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccc----cc---ceecCCCccEEEEEECCCC-------Ccc--eEEEEe--
Confidence 457899999999999999999999999 654 22 2347899999999999998 344 344444
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece------eEEEEEEcCCCCEEEEEeCCC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV------RVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~v~~l~~s~~g~~l~~~~~dg 453 (604)
++....+...+...|.+++|+|+|..+++++.||.|++||.++ .+..+..+ .+.+++|+|||+++++|+.||
T Consensus 74 -~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 74 -AQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp -CCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred -CCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 3322333334578899999999999999999999999999765 44444422 399999999999999999999
Q ss_pred eEEEEEcCCCcc-------ccc-----ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce---eeEee-ccccce
Q psy10566 454 RIRTYNFEHLTD-------SNL-----LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL---LRKFQ-GVTQGQ 517 (604)
Q Consensus 454 ~I~i~d~~~~~~-------~~~-----~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~---~~~~~-~~~~~~ 517 (604)
+|++||+.++.. ... ..|...|.+++|+|+| +++++.|++|++||+.++.. .+++. +|...+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 999999998753 122 3356799999999999 88899999999999988774 34563 565544
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE--cCCCCcEEEEEeCCCcEEEECCC
Q psy10566 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW--NPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~--sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
..+ .++ |+.+|+++ +++|++||+.+++......+|.+.|.+++| +|+ +..+++++.||+ ++|..+
T Consensus 230 ~sv---aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d-~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 230 TDL---KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE-STILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCE---EEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS-CEEEEECSSCEE-EEEESS
T ss_pred EEE---EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC-CCEEEEEcCCCC-EEEeec
Confidence 444 344 58899997 699999999988874444489999999999 999 799999999999 999875
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.2e-32 Score=281.27 Aligned_cols=281 Identities=15% Similarity=0.239 Sum_probs=224.4
Q ss_pred cEEEEEEcCCCCe-EEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEECCC
Q psy10566 303 EVWFCKFSPDGLK-LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 303 ~V~~v~fspdg~~-lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
....++++|+... +++++.||.|+||++............+.+|...|.+++|+| ++.+|++++.|+ +|++||+.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg--~v~vw~~~~ 113 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC--TVMVWEIPD 113 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS--EEEEEECCT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC--eEEEEEccC
Confidence 4456899998764 446789999999998632211134556788999999999999 999999999998 899999998
Q ss_pred c-------eEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-CCeeeee--ece--eEEEEEEcCCCCEEE
Q psy10566 381 E-------LLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE-GQVLDSW--EGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 381 ~-------~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~-~~~~~~~--~~~--~v~~l~~s~~g~~l~ 447 (604)
+ .....+. +|...|.+++|+|++ ..+++++.||.|++||+. ++.+..+ .++ .|.+++|+|+++.++
T Consensus 114 ~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 114 GGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 7 3444444 688999999999998 699999999999999994 6666677 444 799999999999999
Q ss_pred EEeCCCeEEEEEcCCCcccccc--cCCCC-eeEEEECCCCCEEEEE---ecCCeEEEEecCCCce-eeEee-ccccceEE
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLL--QEDHP-VMSFTIDATDRLALLN---VSTQGVHLWDLRDRIL-LRKFQ-GVTQGQFT 519 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~--~~~~~-i~~~~~s~~~~~l~~~---~~dg~I~lwd~~~~~~-~~~~~-~~~~~~~~ 519 (604)
+++.|+.|++||+++......+ .+... +.++.|+|++.+++++ +.|+.|++||++++.. +.... .+...
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 269 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG--- 269 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS---
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc---
Confidence 9999999999999987766554 34444 8999999999999999 7899999999998765 33333 23333
Q ss_pred EEeeeCCCCCcEEE-EEeCCCcEEEEeCCCCcc-eEEeeC--CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 520 IHSCFGGANQDFVA-SGSEDGKVYIWHVKRELP-IATLSG--HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 520 i~~~~~~~~~~~l~-sgs~dg~I~iwd~~~~~~-~~~l~~--h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+..+.++|++++++ +|+.||.|++||+.++++ +..+.. |...|.+++|+|+ +.++++ .|+.+++|++.++
T Consensus 270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~-~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPK-RGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCG-GGSCGG--GTEEEEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecc-ccccee--cceeEEEEEcCCC
Confidence 33455678999886 555799999999999885 555554 4589999999999 666654 5779999998764
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-31 Score=274.07 Aligned_cols=270 Identities=14% Similarity=0.148 Sum_probs=224.9
Q ss_pred cccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC----C---CeEEEEECCCeEEEEEeCCCCceeEe----
Q psy10566 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD----G---LKLATGSKDTTVIIWDVDPVTFTCQH---- 339 (604)
Q Consensus 271 ~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd----g---~~lasgs~dg~i~iwd~~~~~~~~~~---- 339 (604)
.+.+....+|+........+......+.+|...|++++|+|+ | ++|++++.||.|++|++. ....
T Consensus 32 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~----~~~~~~~~ 107 (397)
T 1sq9_A 32 CSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT----REDETKKV 107 (397)
T ss_dssp EETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEE----ECTTTCCE
T ss_pred EcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEcc----CCcccccc
Confidence 344667778887665555566788899999999999999999 9 999999999999999998 3333
Q ss_pred -eEEeccC-----CCCeeEEEEC----CCCCe-EEEEeCCCceEEEEEECCC------ceEEE-----Eec------CCC
Q psy10566 340 -RKTLEGH-----TLGVAYLAWS----PDSSH-LLVVGPEDCHELWVWNIET------ELLRV-----KLN------HSP 391 (604)
Q Consensus 340 -~~~l~~h-----~~~V~~l~~s----pd~~~-l~s~~~d~~~~i~vwd~~~------~~~~~-----~~~------~~~ 391 (604)
...+..| ...|.+++|+ |++++ |++++.++ .|++||+.+ +..+. .+. ..|
T Consensus 108 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 108 IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG--TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS--CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC--cEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence 6777888 5899999999 99999 99999998 899999988 55443 332 356
Q ss_pred CCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec---e-----eEEEEEEcCCCCEEEEEeCC---CeEEEEE
Q psy10566 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG---V-----RVNCLWCRSDGKSVLAADTH---HRIRTYN 459 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~---~-----~v~~l~~s~~g~~l~~~~~d---g~I~i~d 459 (604)
...|.+++|+|++ .+++++.||.|++||+. ++.+..+.. + .+.+++|+|+++++++++.| +.|++||
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE
Confidence 7889999999999 99999999999999995 666777665 3 69999999999999999999 9999999
Q ss_pred cCCCccccccc--------------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee------cc------
Q psy10566 460 FEHLTDSNLLQ--------------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ------GV------ 513 (604)
Q Consensus 460 ~~~~~~~~~~~--------------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~------~~------ 513 (604)
+.+.+....+. +...|.+++|+|+++++++++.|+.|++||+++++.+..+. +|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1sq9_A 265 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILA 344 (397)
T ss_dssp TTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCC
T ss_pred CCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhc
Confidence 98876555443 68899999999999999999999999999999999999998 66
Q ss_pred ---------ccceEEEEeeeCCCCC----------cEEEEEeCCCcEEEEeCCCCc
Q psy10566 514 ---------TQGQFTIHSCFGGANQ----------DFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 514 ---------~~~~~~i~~~~~~~~~----------~~l~sgs~dg~I~iwd~~~~~ 550 (604)
... +..+.++|++ ++|++|+.||.|++||+.+|+
T Consensus 345 g~~~~~~~~~~~---v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 345 VDEHGDSLAEPG---VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp BCTTSCBCSSCC---EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccCCc---eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 554 4445566887 799999999999999998764
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.1e-30 Score=259.29 Aligned_cols=273 Identities=16% Similarity=0.211 Sum_probs=227.2
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.+.|....+|+..... .....+.+.+.+|.+.|.+++|+|+|++|++|+.|+.|++|+.. ..........+...
T Consensus 56 S~s~D~~i~vWd~~~~~-~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~----~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 56 SASRDKTIIMWKLTRDE-TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT----TGTTTRRFVGHTKD 130 (340)
T ss_dssp EEETTSCEEEEEECCSS-SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EEcCCCeEEEEECCCCC-cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec----ccceeeeecCCCCc
Confidence 45667788888865432 22345677899999999999999999999999999999999988 44556667778889
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC--CEEEEEecCCeEEEEEcC-CCee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG--TKFVCGGIRGQFYQCDIE-GQVL 426 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~~-~~~~ 426 (604)
+..+.+++++.++++++.|+ .+++||.............|...+..++|++++ ..+++++.|+.|++||+. ++.+
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~--~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDK--TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp EEEEEECTTSSCEEEEETTS--CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eeEEEEeecCccceeecCCC--eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 99999999999999999998 899999988877766666888999999999865 578899999999999995 5666
Q ss_pred eeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
..+.++ .|.+++|+|+++++++++.|+.|++||+.+......+.+...+.+++++|++.+ ++++.|+.|++||++++
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSE-EEEEETTEEEEEETTTT
T ss_pred eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCce-eeccCCCEEEEEECCCC
Confidence 666665 699999999999999999999999999999888888888889999999998765 55667999999999988
Q ss_pred ceeeEeeccc------cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 505 ILLRKFQGVT------QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 505 ~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
..+..+.... .....+.++.++|++++|++|+.||.|+|||+++|+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 7776665321 112245556778999999999999999999999885
No 85
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-30 Score=275.01 Aligned_cols=284 Identities=14% Similarity=0.111 Sum_probs=224.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-------------------------------------
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE------------------------------------- 344 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~------------------------------------- 344 (604)
.++.+++|+|||++|+++ .++.|++||+..+.. ...+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNH-WEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTE-EEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCc-ceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 578999999999976665 578999999874330 11222222
Q ss_pred -----------------cCCCCeeEEEECCCCCeE-EEEeCCCceEEEEEECC--CceEEEEecC-CCCCCeEEEEEecC
Q psy10566 345 -----------------GHTLGVAYLAWSPDSSHL-LVVGPEDCHELWVWNIE--TELLRVKLNH-SPEDSLTSCSWNRD 403 (604)
Q Consensus 345 -----------------~h~~~V~~l~~spd~~~l-~s~~~d~~~~i~vwd~~--~~~~~~~~~~-~~~~~v~~~~~~~~ 403 (604)
+|...|.+++|+|++++| ++++.|+ .|++||+. ++.....+.. .+...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDK--SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGT--EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCC--eEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 344579999999999996 7888888 89999999 7777666542 45678999999999
Q ss_pred CCEEEEEecCCeEEEEEcC-CCeee----eeece--eEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCccccc--ccC
Q psy10566 404 GTKFVCGGIRGQFYQCDIE-GQVLD----SWEGV--RVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLTDSNL--LQE 471 (604)
Q Consensus 404 ~~~l~s~~~dg~i~iwd~~-~~~~~----~~~~~--~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~~~~~--~~~ 471 (604)
+++|++|+.+|.|++|++. +.... .+.++ .|.+++|+|+ ++++++++.|+.|++||+.+...... ..|
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 9999999999999999984 33222 44444 7999999999 99999999999999999998765543 357
Q ss_pred CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc----------------------cceEEEEeeeCCCCC
Q psy10566 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT----------------------QGQFTIHSCFGGANQ 529 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~----------------------~~~~~i~~~~~~~~~ 529 (604)
...|.+++|+ +++++++++.|+.|++||+++++.+..+..+. .....+..+.++|++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 8899999999 99999999999999999999999888876432 112234556667999
Q ss_pred cEEEEEe-CCCcEEEEeC--CCC---cceEEeeCCCCCeeEEEEcCCCCcEEEEEeC------CCcEEEECCCCC
Q psy10566 530 DFVASGS-EDGKVYIWHV--KRE---LPIATLSGHTRTVSCVAWNPVYHQMIASVSD------DCTVRIWGPHLN 592 (604)
Q Consensus 530 ~~l~sgs-~dg~I~iwd~--~~~---~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~------Dg~I~iW~~~~~ 592 (604)
+++++++ .|+.|+||++ .++ +.+..+.+| +.|.+++|+|+ +.++++++. +..|.+|.++..
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~-~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHND-EFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETT-EEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCC-cEEEEEecccCCCCCCcceEEEEEEcC
Confidence 9999999 8999999999 565 677788888 88999999996 444444343 556899987654
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-30 Score=294.68 Aligned_cols=301 Identities=13% Similarity=0.134 Sum_probs=244.9
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEE
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYL 353 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l 353 (604)
+....+|+.. ....+..+.+|.+.|++++|+|+|++|++|+.||.|+|||+. +......+.+|...|.++
T Consensus 34 ~g~v~iwd~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~----~~~~~~~~~~~~~~v~~~ 103 (814)
T 3mkq_A 34 SGRVEIWNYE------TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN----TGEKVVDFEAHPDYIRSI 103 (814)
T ss_dssp TSEEEEEETT------TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEE
T ss_pred CCEEEEEECC------CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC----CCcEEEEEecCCCCEEEE
Confidence 3445566543 245678889999999999999999999999999999999998 556778889999999999
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeec
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG 431 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~ 431 (604)
+|+|++++|++++.|+ .|++||+.++.........|...|.+++|+| ++..+++++.||.|++||+. +.....+..
T Consensus 104 ~~s~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 104 AVHPTKPYVLSGSDDL--TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EECSSSSEEEEEETTS--EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEeCCCCEEEEEcCCC--EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 9999999999999998 8999999987444444447888999999999 88999999999999999994 444444433
Q ss_pred ---eeEEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 432 ---VRVNCLWCRS--DGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 432 ---~~v~~l~~s~--~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
..+.+++|+| ++..+++++.||.|++||+.+......+. +...+.+++|+|++.++++++.||.|++||+.+++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4689999999 99999999999999999998876555444 77899999999999999999999999999999999
Q ss_pred eeeEeeccccceEEEEeeeCCCCCc--EEEEEeCCCcEEEEeCCCCcceEE-----------------------------
Q psy10566 506 LLRKFQGVTQGQFTIHSCFGGANQD--FVASGSEDGKVYIWHVKRELPIAT----------------------------- 554 (604)
Q Consensus 506 ~~~~~~~~~~~~~~i~~~~~~~~~~--~l~sgs~dg~I~iwd~~~~~~~~~----------------------------- 554 (604)
.+..+..+...+.. +.++|++. ++++++ ++.+.+|++..+.....
T Consensus 262 ~~~~~~~~~~~v~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 337 (814)
T 3mkq_A 262 VEKTLNVGLERSWC---IATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNE 337 (814)
T ss_dssp EEEEECCSSSSEEE---EEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCC
T ss_pred EEEEeecCCCcEEE---EEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccc
Confidence 99999888775444 44567876 455555 66688888764332221
Q ss_pred --------------eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 555 --------------LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 555 --------------l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+..+...+.+++|+|+ +.++++++ ||.+.+|++...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~la~~~-~~~~~i~~~~~~ 387 (814)
T 3mkq_A 338 EVEQDEPLSLQTKELGSVDVFPQSLAHSPN-GRFVTVVG-DGEYVIYTALAW 387 (814)
T ss_dssp CCCSSSCBCCCCEEECCCSSCCSEEEECTT-SSEEEEEE-TTEEEEEETTTT
T ss_pred ccccCccceeeeecCCCCccCCceeEECCC-CCEEEEec-CCEEEEEECccc
Confidence 1234456789999998 78888887 889999987543
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-30 Score=271.21 Aligned_cols=278 Identities=15% Similarity=0.209 Sum_probs=219.8
Q ss_pred cCccccccccCcCcCCCCcccee--ecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCe
Q psy10566 273 LENVSLLVDHLCTKEEFPCETTQ--VLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350 (604)
Q Consensus 273 ~~~~~l~~d~~~~~~~~p~~~~~--~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V 350 (604)
++....+|+... .++.+ .+.+|.+.|++|+|+|+|++||+|+.||+|+|||+. +.+.+..+.+|...|
T Consensus 123 ld~tV~lWd~~t------g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~----~~~~~~~~~~h~~~v 192 (420)
T 4gga_A 123 LDNSVYLWSASS------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ----QQKRLRNMTSHSARV 192 (420)
T ss_dssp ETTEEEEEETTT------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCE
T ss_pred eCCEEEEEECCC------CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC----CCcEEEEEeCCCCce
Confidence 355666776543 23344 455788899999999999999999999999999998 567788999999999
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CC----e
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQ----V 425 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~----~ 425 (604)
.+++|+ +..+++++.|+ .+++||............+|...+..+.|+|++.++++++.|+.+++|+.. ++ .
T Consensus 193 ~~~s~~--~~~l~sgs~d~--~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~ 268 (420)
T 4gga_A 193 GSLSWN--SYILSSGSRSG--HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP 268 (420)
T ss_dssp EEEEEE--TTEEEEEETTS--EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC
T ss_pred EEEeeC--CCEEEEEeCCC--ceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccccee
Confidence 998875 57899999998 899999987665544445788999999999999999999999999999984 22 2
Q ss_pred eeeeece--eEEEEEEcCCCCEE-EE--EeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEEE
Q psy10566 426 LDSWEGV--RVNCLWCRSDGKSV-LA--ADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVHL 498 (604)
Q Consensus 426 ~~~~~~~--~v~~l~~s~~g~~l-~~--~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~l 498 (604)
+.....+ .|.+++|+|++..+ ++ |+.|+.|++||+.++.....+.....+.++.|+++++.+++++ .|+.|++
T Consensus 269 ~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~i 348 (420)
T 4gga_A 269 LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVI 348 (420)
T ss_dssp SEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEE
T ss_pred eeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEE
Confidence 3333333 69999999976544 43 3579999999999998888888888999999999999998876 6899999
Q ss_pred EecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
||+.+++++..+.+|...+. ++.++|+|++|+||+.||+|+|||+....+......+...+....+
T Consensus 349 wd~~~~~~v~~l~gH~~~V~---~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVL---SLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp EETTTCCEEEEECCCSSCEE---EEEECTTSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred EECCCCcEEEEEcCCCCCEE---EEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 99999999999999988544 4566899999999999999999999887777766666555444444
No 88
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.4e-31 Score=270.41 Aligned_cols=249 Identities=14% Similarity=0.237 Sum_probs=209.8
Q ss_pred eeEeeEEeccCCCCeeEEEECCCC-CeEEEEeCCCceEEEEEECCCceEEEEec-CCCCCCeEEEEEec-CCCEEEEEec
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDS-SHLLVVGPEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNR-DGTKFVCGGI 412 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~~d~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~s~~~ 412 (604)
.......+.+|...|.+++|+|++ ++|++++.|+ .|++||+.++.....+. .+|...|.+++|+| ++.++++++.
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGG--DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTS--CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCC--eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 345566788999999999999999 8999999998 89999999888776665 36889999999999 7899999999
Q ss_pred CCeEEEEEcCCCeeeeeece-----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCC-E
Q psy10566 413 RGQFYQCDIEGQVLDSWEGV-----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR-L 486 (604)
Q Consensus 413 dg~i~iwd~~~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~-~ 486 (604)
|+.|++||+++..+..+..+ .+.+++|+|+++.+++++.|+.|++||++.........+...|.+++|+|++. +
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 99999999988877777654 49999999999999999999999999996555555566889999999999999 9
Q ss_pred EEEEecCCeEEEEecCC----CceeeEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC--
Q psy10566 487 ALLNVSTQGVHLWDLRD----RILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHT-- 559 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~~----~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-- 559 (604)
+++++.|+.|++||+++ +..+..+ +|... +.++.++| ++++|++++.||.|++||+++++....+.+|.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~---v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKP---VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSC---EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBC
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCc---eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccc
Confidence 99999999999999998 5556555 46554 44455678 99999999999999999999998887777553
Q ss_pred ---------------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 560 ---------------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 560 ---------------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+.+..++|+|+ +.+ +++.||.|++||+.+++
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~d-g~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPD-DQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCC-TTT--CTTCCCCEEEEETTTCC
T ss_pred ccccccceEEeccCCCCceEEEecCC-ccc--ccCCCCeEEEEecCCCc
Confidence 23444666666 343 77799999999998876
No 89
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.4e-31 Score=294.60 Aligned_cols=252 Identities=18% Similarity=0.250 Sum_probs=204.5
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCC--CCeEEEEeCCCce
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD--SSHLLVVGPEDCH 371 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd--~~~l~s~~~d~~~ 371 (604)
+.++.+|.+.|++++|+|+|++|++|+.||+|+|||+. .........+.+|..+|++++|+|+ +++|++++.|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~--~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-- 77 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-- 77 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS--
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecC--CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC--
Confidence 45789999999999999999999999999999999997 4466778899999999999999998 99999999998
Q ss_pred EEEEEECCCce--EEEEecCCCCCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC---eeeeeeceeEEEEEEcCCCC
Q psy10566 372 ELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRD--GTKFVCGGIRGQFYQCDIEGQ---VLDSWEGVRVNCLWCRSDGK 444 (604)
Q Consensus 372 ~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~v~~l~~s~~g~ 444 (604)
.|++||+.++. ....+ ..|...|++++|+|+ +..+++|+.||.|++||+... ....+
T Consensus 78 ~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~--------------- 141 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII--------------- 141 (753)
T ss_dssp CEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE---------------
T ss_pred eEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe---------------
Confidence 89999999986 44444 368889999999998 899999999999999888532 11111
Q ss_pred EEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-------------CCCEEEEEecCCeEEEEecCCC----cee
Q psy10566 445 SVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-------------TDRLALLNVSTQGVHLWDLRDR----ILL 507 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~I~lwd~~~~----~~~ 507 (604)
..+...|.+++|+| ++..+++++.||.|++||++++ ...
T Consensus 142 ------------------------~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 142 ------------------------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp ------------------------ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred ------------------------ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 12344566666666 6899999999999999999887 455
Q ss_pred eEeeccccceEEEEeeeCCCC---CcEEEEEeCCCcEEEEeCCCCc-----ceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 508 RKFQGVTQGQFTIHSCFGGAN---QDFVASGSEDGKVYIWHVKREL-----PIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~---~~~l~sgs~dg~I~iwd~~~~~-----~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
..+.+|...+ .++.++|+ ++++++|+.||.|++||+.++. .+....+|.+.|++++|+|+ +.++++++
T Consensus 198 ~~~~~h~~~V---~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~l~s~s 273 (753)
T 3jro_A 198 STLEGHSDWV---RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLS-GNVLALSG 273 (753)
T ss_dssp EEECCCSSCE---EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTT-TCCEEEEC
T ss_pred eeecCCCCcE---EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCC-CCEEEEEc
Confidence 6777777754 44555788 8999999999999999999864 33344568899999999999 88999999
Q ss_pred CCCcEEEECCCCCC
Q psy10566 580 DDCTVRIWGPHLNT 593 (604)
Q Consensus 580 ~Dg~I~iW~~~~~~ 593 (604)
.||.|++|++..+.
T Consensus 274 ~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 274 GDNKVTLWKENLEG 287 (753)
T ss_dssp SSSCEECCBCCSSS
T ss_pred CCCEEEEEecCCCC
Confidence 99999999998644
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=2.8e-30 Score=267.47 Aligned_cols=252 Identities=15% Similarity=0.200 Sum_probs=206.7
Q ss_pred ceeeccc-CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 293 TTQVLND-HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 293 ~~~~l~~-H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
....+.. |.+.|++++|+|++++|++|+.||.|++||+. .......+.+|...|.+++| ++..+++++.|+
T Consensus 125 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-- 196 (401)
T 4aez_A 125 VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE----SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSG-- 196 (401)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTS--
T ss_pred EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc----CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCC--
Confidence 3444444 89999999999999999999999999999998 55667888899999999999 457999999998
Q ss_pred EEEEEECCCc-eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEEEEEEcCCCCEEE
Q psy10566 372 ELWVWNIETE-LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVNCLWCRSDGKSVL 447 (604)
Q Consensus 372 ~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~~l~~s~~g~~l~ 447 (604)
.|++||+... .....+ ..|...|.+++|+|++.+|++|+.||.|++||+. ++.+..+..+ .|.+++|+|++..++
T Consensus 197 ~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEE
T ss_pred CEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEE
Confidence 8999999854 444444 4688999999999999999999999999999995 5666666554 799999999876554
Q ss_pred -EEe--CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEEEEecCCCceeeE--eeccccceEEE
Q psy10566 448 -AAD--THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVHLWDLRDRILLRK--FQGVTQGQFTI 520 (604)
Q Consensus 448 -~~~--~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~lwd~~~~~~~~~--~~~~~~~~~~i 520 (604)
+++ .|+.|++||+.+......+.+...+.+++|+|++.++++++ .||.|++||+.++..... +.+|...+.
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~-- 353 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVL-- 353 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCC--
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEE--
Confidence 443 69999999999988888888889999999999999999954 899999999998765544 557766544
Q ss_pred EeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 521 HSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 521 ~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
.+.++|++.+|++++.||.|++||+.+++.+....
T Consensus 354 -~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 354 -YSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp -EEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred -EEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 34557999999999999999999999988776554
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=3.8e-30 Score=262.96 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=208.5
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+..|..+|.+++|+|++++|++++.++ .|++||+.+++ ....+. .|...|.+++|+|+++++++++.||.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~--~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNH--EVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSS--EEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCC--EEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 345889999999999999999999998 89999999987 666665 6888999999999999999999999999999
Q ss_pred cCCCe-eeee--e--ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc----ccc-ccCCCCeeEEEECCCCCEEEEE
Q psy10566 421 IEGQV-LDSW--E--GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD----SNL-LQEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 421 ~~~~~-~~~~--~--~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~----~~~-~~~~~~i~~~~~s~~~~~l~~~ 490 (604)
++... .... . ...+.+++|+|+++.+++++.++.|++||+..... ... ..+...|.+++|+|++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 95433 2222 2 23799999999999999999999999999988653 222 3467899999999999999999
Q ss_pred ecCCeEEEEecC------------------CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 491 VSTQGVHLWDLR------------------DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 491 ~~dg~I~lwd~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
+.|+.|++||++ .++.+..+.+|...+ ..+.++|++++|++++.||.|++||+++++++
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV---HGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE---EEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE---EEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 999999999953 677888888777744 44556799999999999999999999999999
Q ss_pred EEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 553 ~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..+..|...|++++|+|+ +.+++++ .||.|++|++..
T Consensus 238 ~~~~~~~~~v~~~~~~~~-~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITE-SSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSCCEEEEEEEET-TEEEEEE-TTSSCEEEEEET
T ss_pred EEEccCCCCeEEEEEecC-CCEEEEE-eCCeEEEEEccC
Confidence 999999999999999998 7778777 899999999987
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.8e-29 Score=255.79 Aligned_cols=251 Identities=12% Similarity=0.147 Sum_probs=218.8
Q ss_pred ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 335 FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 335 ~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
+.......+.+|...|++++|+|++++|++++.|+ .|++||+.+++....+. .|...|.+++|+|++++|++++.||
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDS--SASVWYSLNGERLGTLD-GHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSS--CEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCC--EEEEEeCCCchhhhhhh-hcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 34455677899999999999999999999999998 89999999999888876 6888999999999999999999999
Q ss_pred eEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCcccc------------cccCCC--
Q psy10566 415 QFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAADTH-----HRIRTYNFEHLTDSN------------LLQEDH-- 473 (604)
Q Consensus 415 ~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~~~d-----g~I~i~d~~~~~~~~------------~~~~~~-- 473 (604)
.|++||+. ++.+..+.. ..+.+++|+|+++.+++++.+ +.|++||+....... ...+..
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred eEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 99999994 666666653 379999999999999999999 999999997754321 122233
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCC-CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
.+.+++|+|+++++++++.||.|++||+++ +..+..+..|...+ ..+.++|++++|++++.||.|++||+.+++.+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI---SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE---EEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce---eEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 899999999999999999999999999998 78888888887754 44556799999999999999999999999999
Q ss_pred EEeeCCCCCeeEEEEcCCCCcEEEEEeCCC--------------cEEEECCCCCC
Q psy10566 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDC--------------TVRIWGPHLNT 593 (604)
Q Consensus 553 ~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg--------------~I~iW~~~~~~ 593 (604)
..+. +...+.+++|+|+ +.++++++.++ .+++|+..++.
T Consensus 254 ~~~~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 254 KKYE-TDCPLNTAVITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp EEEE-CSSCEEEEEECSS-SSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred eeec-CCCCceeEEecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 8888 7788999999999 78999999888 89999998765
No 93
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.2e-31 Score=281.83 Aligned_cols=276 Identities=12% Similarity=0.051 Sum_probs=208.7
Q ss_pred CccceeecccCCCcEEEEEEcCCC---------CeEEE-------------------EECCCeEEEEEeCCCCceeEeeE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDG---------LKLAT-------------------GSKDTTVIIWDVDPVTFTCQHRK 341 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg---------~~las-------------------gs~dg~i~iwd~~~~~~~~~~~~ 341 (604)
+.+...++. +.+.|++|+|+|++ ++||+ ++.|++|+||++...........
T Consensus 123 ~~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~ 201 (524)
T 2j04_B 123 GKRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQ 201 (524)
T ss_dssp CCSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEE
T ss_pred CCcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEE
Confidence 344444454 67889999999886 56666 55788999999974332233345
Q ss_pred EeccCCCCeeEEEECCC------CCeEEEEeCCCceEEEEEECCCceEE-----------EEecCCCCCCeEEEEEecCC
Q psy10566 342 TLEGHTLGVAYLAWSPD------SSHLLVVGPEDCHELWVWNIETELLR-----------VKLNHSPEDSLTSCSWNRDG 404 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd------~~~l~s~~~d~~~~i~vwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~ 404 (604)
.+.+|.+.|.+++|+|+ +.+|++++.|+ +|++||+.++... ..+ .+|...|++++|+++
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg--tvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~- 277 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEG--TINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITTFDFLSP- 277 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTS--CEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEEEEESSS-
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCC--eEEEEEcCCCccccccceeecCceEEE-EcCCCCEEEEEecCC-
Confidence 56778899999999997 57999999998 8999999876421 122 367789999999986
Q ss_pred CEEEEEecCCeEEEEEcC-C-Ceeeeeece--eEEEE--EEcCCC-CEEEEEeCCCeEEEEEcCCCcccccc-cCC--CC
Q psy10566 405 TKFVCGGIRGQFYQCDIE-G-QVLDSWEGV--RVNCL--WCRSDG-KSVLAADTHHRIRTYNFEHLTDSNLL-QED--HP 474 (604)
Q Consensus 405 ~~l~s~~~dg~i~iwd~~-~-~~~~~~~~~--~v~~l--~~s~~g-~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~--~~ 474 (604)
..|++|+.||+|++||++ + .....+.+| .|.++ ++++++ ..+++++.|++|++||+++.+....+ .+. ..
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 489999999999999996 4 233445555 69988 568887 89999999999999999886554333 232 35
Q ss_pred eeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE
Q psy10566 475 VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 475 i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~ 554 (604)
+.+++|+|++..+++++.|++|++||++++.++..+.+|...+. ++.++|++++|++|+.||+|++||...+ .+..
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~---sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~ 433 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTIT---AIGVSRLHPMVLAGSADGSLIITNAARR-LLHG 433 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEE---EEECCSSCCBCEEEETTTEEECCBSCSS-TTTC
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceE---EEEeCCCCCeEEEEECCCEEEEEechHh-hccc
Confidence 78999999999999999999999999999998888989888554 4566899999999999999999998754 3322
Q ss_pred eeC-----CCCCeeEEEEcCCCCcEE
Q psy10566 555 LSG-----HTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 555 l~~-----h~~~V~~v~~sp~~~~~l 575 (604)
+.. +...|.+++|+|+ +..+
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp~-g~~~ 458 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSIK-DDKY 458 (524)
T ss_dssp C------CCCCEEEECBCCSS-SCEE
T ss_pred cccCccceeeeEEEEeccCCC-CCeE
Confidence 221 1225789999999 5544
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=6.5e-30 Score=267.26 Aligned_cols=246 Identities=17% Similarity=0.289 Sum_probs=204.1
Q ss_pred EEeccCCCCeeEEEECCC-CCeEEEEeCCCceEEEEEECCC----------ceEEEEecCCCCCCeEEEEEecCCC-EEE
Q psy10566 341 KTLEGHTLGVAYLAWSPD-SSHLLVVGPEDCHELWVWNIET----------ELLRVKLNHSPEDSLTSCSWNRDGT-KFV 408 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd-~~~l~s~~~d~~~~i~vwd~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 408 (604)
.....|.+.|++++|+|+ +.++++++.++ .|++||+.+ ......+. .|...|.+++|+|++. +|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg--~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSS--DVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSS--CEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCC--cEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEE
Confidence 445569999999999997 67888888888 899999986 44445554 6788999999999988 999
Q ss_pred EEecCCeEEEEEcCC-C----e---eeeeece--eEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCc---ccc-cccCCC
Q psy10566 409 CGGIRGQFYQCDIEG-Q----V---LDSWEGV--RVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLT---DSN-LLQEDH 473 (604)
Q Consensus 409 s~~~dg~i~iwd~~~-~----~---~~~~~~~--~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~---~~~-~~~~~~ 473 (604)
+|+.||.|++||+.. . . ...+.+| .|.+++|+| ++..+++++.|+.|++||+++.. ... ...+..
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 999999999999954 1 1 2334444 699999999 67889999999999999999762 322 335788
Q ss_pred CeeEEEECCCCC-EEEEEecCCeEEEEecCC-CceeeEeeccccceEEEEeeeCCCCC-cEEEEEeCCCcEEEEeCCC--
Q psy10566 474 PVMSFTIDATDR-LALLNVSTQGVHLWDLRD-RILLRKFQGVTQGQFTIHSCFGGANQ-DFVASGSEDGKVYIWHVKR-- 548 (604)
Q Consensus 474 ~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~sgs~dg~I~iwd~~~-- 548 (604)
.|.+++|+|++. ++++++.||.|++||+++ ..++..+.+|...+.. +.++|++ .++++++.||.|+|||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~---i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ---VQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEE---EEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEE---EEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999999999997 688999999999999998 5678888888775444 4556877 5799999999999999986
Q ss_pred ------------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 549 ------------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 549 ------------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+++..+.+|...|++++|+|++..+|++++.||.|+||++...
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 36677888999999999999994449999999999999998753
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=263.66 Aligned_cols=267 Identities=12% Similarity=0.065 Sum_probs=209.9
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC-------
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE------- 379 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~------- 379 (604)
..+.+++.+|++|+.||+|++||+. ..+.+..+. ...|.++.|+|+ +++++.|+ +|++|+..
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~----~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~--~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLK----DSKTITTIT--TPNPRTGGEHPA---IISRGPCN--RLLLLYPGNQITILD 110 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEES----SSSCEEEEE--EECCCTTCCCCS---EEEECSTT--EEEEEETTTEEEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECC----CCcEEEEEe--cCCceeeeeCCc---eEEecCCC--eEEEEEccCceEEee
Confidence 4556788899999999999999998 333344443 467888899998 89999998 89999655
Q ss_pred --CceEEEEecCCCCCCeEEEEEec--CCCEEEEEecCCeEEEEEcC-CCeeeeeec---eeEEEEEEcCCCCEEEEEeC
Q psy10566 380 --TELLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG---VRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 380 --~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~ 451 (604)
++..+......|...|.+++|+| +++++++++.||.|++||++ ++.+..... ..+.+++|+|++.++++|+.
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 55556666666778899999999 99999999999999999995 555444422 26999999999999999999
Q ss_pred CCeEEEEEcCCCccc--cccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE--eeeCC
Q psy10566 452 HHRIRTYNFEHLTDS--NLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH--SCFGG 526 (604)
Q Consensus 452 dg~I~i~d~~~~~~~--~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~--~~~~~ 526 (604)
||.|++||+++.... .+.. |..+|.+++|+|++.++++++ ++.|++||+++++.+..+..+......+. ++.++
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence 999999999988765 3444 789999999999999999999 55999999999887766654322222222 36668
Q ss_pred CCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC---CCCcEEEEEeCCCcEEEECCC
Q psy10566 527 ANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVSCVAWNP---VYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 527 ~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp---~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|++++|++++. |+.|+||++.+....... .++..++|+| + ...+++++.||.++++-..
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTAD-FTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CC-CCEEEEEEETTEEEEEEEC
T ss_pred CCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccc-cceeEEEecCCceEEEEec
Confidence 99999999998 999999999766544443 5678888988 6 6788999999999987543
No 96
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.5e-31 Score=271.57 Aligned_cols=239 Identities=8% Similarity=0.079 Sum_probs=194.9
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc--eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE--LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+..+..+|++++|+|++++|++++.|+ .|++||+.++ .....+. .|...|.+++|+|++++|++++.|+.|++||
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATN--QVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSS--CBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCC--EEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 334677999999999999999999998 8999999988 4444444 7889999999999999999999999999999
Q ss_pred cCCC----eeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----cccccc-CCCCeeEEEECCCCCEEEE
Q psy10566 421 IEGQ----VLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT----DSNLLQ-EDHPVMSFTIDATDRLALL 489 (604)
Q Consensus 421 ~~~~----~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~----~~~~~~-~~~~i~~~~~s~~~~~l~~ 489 (604)
+... ....+.++ .|.+++|+|+++.+++++.|+.|++||+++.. ...+.. |...|.+++|+|+++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 9543 34444444 79999999999999999999999999999875 233334 7889999999999999999
Q ss_pred EecCCeEEEEecC------------------CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 490 NVSTQGVHLWDLR------------------DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 490 ~~~dg~I~lwd~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
++.|+.|++||+. .++++..+ +|... +.++.++|++++|++|+.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW---VHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS---EEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce---EEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999995 34455555 66664 44456679999999999999999999999988
Q ss_pred ----eEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 552 ----IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 552 ----~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+..+.+|...|.+++|+|+ +.+|+++++|+.+ +|+..
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANE-SAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEET-TEEEEEESSSSEE-EECCC
T ss_pred cceeeEeecCCCCceEEEEEcCC-CCEEEEEcCCcEE-EEEeC
Confidence 8889999999999999999 7899998877766 66655
No 97
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.1e-29 Score=256.46 Aligned_cols=242 Identities=14% Similarity=0.206 Sum_probs=208.6
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce----EEEEecCCCCCCeEEEEEecCCC-EEEEEecCCe
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL----LRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQ 415 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~ 415 (604)
....+|...|.+++|+|++++|++++.|+ .|++||+.++. ..... .|...|.+++|+|+++ ++++|+.||.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~--~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDG--SLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTS--EEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCC--eEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCCCe
Confidence 34557999999999999999999999998 89999998876 33333 5788999999999999 9999999999
Q ss_pred EEEEEc-CCCeeeeeec--e--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCC---------CcccccccCCCCeeEEEEC
Q psy10566 416 FYQCDI-EGQVLDSWEG--V--RVNCLWCRSDGKSVLAADTHHRIRTYNFEH---------LTDSNLLQEDHPVMSFTID 481 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~--~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~---------~~~~~~~~~~~~i~~~~~s 481 (604)
|++||+ .......+.+ + .|.+++|+| ++.+++++.|+.|++||+++ .+....+.+...+.+++|+
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN 159 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec
Confidence 999999 8766677766 5 699999999 99999999999999999987 6666666788999999999
Q ss_pred CCCCEEEEEecCCeEEEEecCC-Ccee--eEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCC------cc
Q psy10566 482 ATDRLALLNVSTQGVHLWDLRD-RILL--RKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRE------LP 551 (604)
Q Consensus 482 ~~~~~l~~~~~dg~I~lwd~~~-~~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~------~~ 551 (604)
|++ +++++.++.|++||+++ +... .....+.. .+.++.++| +++++++|+.||.|++|++... +.
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 234 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY---QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSS---CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCC---ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccc
Confidence 887 99999999999999998 5432 23334444 344556678 9999999999999999999887 88
Q ss_pred eEEeeCCCC---------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 552 IATLSGHTR---------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 552 ~~~l~~h~~---------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
...+.+|.. .|++++|+|+ +.+|++++.||.|++||+.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred ceeeecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccHh
Confidence 889988865 9999999999 7899999999999999998765
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.7e-30 Score=268.11 Aligned_cols=246 Identities=15% Similarity=0.214 Sum_probs=200.8
Q ss_pred EeccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEECCCceEEEEe-cCCCCCCeEEEEEec-CCCEEEEEecCCeEEE
Q psy10566 342 TLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWNIETELLRVKL-NHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQ 418 (604)
Q Consensus 342 ~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~i 418 (604)
...+|...|++|+|+| ++.+|++|+.|| .|++||+.++.....+ ..+|.+.|++++|+| ++.+|++|+.||+|++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg--~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGG--DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTS--CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCC--EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4456888999999999 466899999998 8999999887644333 247889999999998 7899999999999999
Q ss_pred EEcCCCeeeeeece-----eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCC-EEEEEec
Q psy10566 419 CDIEGQVLDSWEGV-----RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDR-LALLNVS 492 (604)
Q Consensus 419 wd~~~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~ 492 (604)
||+++.....+..+ .+.+++|+++++++++|+.||.|++||++......+..|...|.+++|+|++. ++++++.
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 99987766655432 46789999999999999999999999998877666777899999999999986 6778999
Q ss_pred CCeEEEEecCCCceeeEe---eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC------Cee
Q psy10566 493 TQGVHLWDLRDRILLRKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR------TVS 563 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~------~V~ 563 (604)
|+.|++||+++.+....+ .+|.. .|.++.++|+|++|++|+.||.|+|||+.++.....+..|.. .+.
T Consensus 272 d~~v~iwd~~~~~~~~~~~~~~~h~~---~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLYSLPHRH---PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSBCCBCSS---CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred cceeeEEecccccccceEEEeeeccc---cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 999999999987655444 34554 456677789999999999999999999999998888877643 234
Q ss_pred EEEEcCCCCcEEEEEe------------CCCcEEEECCCCCC
Q psy10566 564 CVAWNPVYHQMIASVS------------DDCTVRIWGPHLNT 593 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s------------~Dg~I~iW~~~~~~ 593 (604)
...|+|+ +.++++++ +++.|++||..++.
T Consensus 349 ~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 349 KAAWHPR-YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp BCEECSS-SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EEEEcCC-CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 5677777 45555543 34679999998875
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=5.9e-30 Score=261.28 Aligned_cols=247 Identities=12% Similarity=0.103 Sum_probs=195.8
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEE-----------ECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCC
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATG-----------SKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPD 358 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasg-----------s~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd 358 (604)
..|.+|.+.|.++++++ ..+++| +.|+++++|++.............. .+...+.+++||||
T Consensus 67 ~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 35788999999887764 455554 4678899999875444444333332 24456899999999
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee----eceeE
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW----EGVRV 434 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~v 434 (604)
|+++++++.+..++|++||+.+++.+..+. |...|.+++|+|+|+++++++.++.+.+|..++..+... +...+
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCE
Confidence 999987765433499999999999988876 567799999999999999999776665555566655432 23479
Q ss_pred EEEEEcCCCCEEEEEeCCC----eEEEEEcCCCcc-----cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc
Q psy10566 435 NCLWCRSDGKSVLAADTHH----RIRTYNFEHLTD-----SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI 505 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg----~I~i~d~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~ 505 (604)
.+++|+|+++.+++++.++ .++.|++..... .....+..+|++++|+|+|++|++|+.|++|+|||+++++
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 9999999999999999887 688898876533 2334567899999999999999999999999999999999
Q ss_pred eeeEe-eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 506 LLRKF-QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 506 ~~~~~-~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
++..+ .+|... |.++.|+|+|++||+||.|++|+|||+..
T Consensus 303 ~~~~~~~gH~~~---V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 303 MSKIFKQAHSFA---ITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEETTSSSSC---EEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEEecCcccCC---EEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99886 678875 44556689999999999999999999964
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.1e-29 Score=261.25 Aligned_cols=286 Identities=9% Similarity=0.094 Sum_probs=233.0
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeE-----EeccCCCCeeEEEECCCCCeEEEEe
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK-----TLEGHTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~-----~l~~h~~~V~~l~~spd~~~l~s~~ 366 (604)
+.+..+..| ..+.+++|+|++.++++++.|+.|++||+. +.+... .+.+|...|.+++|+|++..+++++
T Consensus 114 ~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 188 (433)
T 3bws_A 114 RFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDIN----SGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM 188 (433)
T ss_dssp EEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETT----TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG
T ss_pred eEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECC----CCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC
Confidence 444555555 446699999988888888889999999998 233333 4557889999999999999999999
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCC
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDG 443 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g 443 (604)
.++ .|++||+.+++....+. .+...+.+++|+|+++.+++++ .++.|++||+. ++.+..+..+ .+.+++++|++
T Consensus 189 ~d~--~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 189 QAN--AVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG 265 (433)
T ss_dssp GGT--EEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTS
T ss_pred CCC--EEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCC
Confidence 888 89999999998887776 5677899999999999886554 79999999994 5555555443 68999999999
Q ss_pred CEEEEEe--------CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEE-EEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 444 KSVLAAD--------THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA-LLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 444 ~~l~~~~--------~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
+.+++++ .|+.|++||+.+.+......+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+.. .
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~ 344 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-F 344 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-S
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-C
Confidence 9999988 5889999999988777666666789999999999765 5558899999999999988877763 3
Q ss_pred cceEEEEeeeCCCCCcEEEEEeC---------------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSE---------------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~---------------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
.. +..+.++|+++++++++. ||.|++||..+++.+..+..+ ..+.+++|+|+ +.+|++++
T Consensus 345 ~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~~~~ 419 (433)
T 3bws_A 345 DK---PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPD-NRYLVISD 419 (433)
T ss_dssp SS---EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTT-SCEEEEEE
T ss_pred CC---CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCC-CCEEEEEE
Confidence 32 334566799998888876 579999999999999888864 57899999999 67777665
Q ss_pred -CCCcEEEECCCC
Q psy10566 580 -DDCTVRIWGPHL 591 (604)
Q Consensus 580 -~Dg~I~iW~~~~ 591 (604)
.|+.|++|+++.
T Consensus 420 ~~d~~i~v~~~~~ 432 (433)
T 3bws_A 420 FLDHQIRVYRRDG 432 (433)
T ss_dssp TTTTEEEEEEETT
T ss_pred CCCCeEEEEEecC
Confidence 599999999864
No 101
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2.9e-30 Score=262.90 Aligned_cols=238 Identities=18% Similarity=0.295 Sum_probs=199.8
Q ss_pred CCCcEEEEEEcCC----CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCceEEE
Q psy10566 300 HCDEVWFCKFSPD----GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELW 374 (604)
Q Consensus 300 H~~~V~~v~fspd----g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~ 374 (604)
|...|++++|+|+ |.+|++|+.||.|++||+. +.+.+..+.+|...|.+++|+| ++.+|++++.|+ .|+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg--~i~ 141 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI----TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDH--ALR 141 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT----TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTS--CEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch----hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCC--eEE
Confidence 6688999999999 6799999999999999998 4566788889999999999999 899999999998 899
Q ss_pred EEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeee----------------------
Q psy10566 375 VWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSW---------------------- 429 (604)
Q Consensus 375 vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~---------------------- 429 (604)
+||+.+++....+. ..|...|.+++|+|+++++++++.||.|++||+.. +....+
T Consensus 142 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp EEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred EEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 99999999888773 46888999999999999999999999999999953 222111
Q ss_pred --------eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc---------------cccccCCCCeeEEEECCC--C
Q psy10566 430 --------EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD---------------SNLLQEDHPVMSFTIDAT--D 484 (604)
Q Consensus 430 --------~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~---------------~~~~~~~~~i~~~~~s~~--~ 484 (604)
....|.+++|+ ++.+++++.|+.|++||+.+... .....+...|.+++|+|+ +
T Consensus 222 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ 299 (366)
T ss_dssp CSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS
T ss_pred CccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC
Confidence 22368889998 78999999999999999987543 112235677899999999 9
Q ss_pred CEEEEEecCCeEEEEecCCCceee----Eeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 485 RLALLNVSTQGVHLWDLRDRILLR----KFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 485 ~~l~~~~~dg~I~lwd~~~~~~~~----~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+++++++.||.|++||+.+++... .+.+| .. .+..+.++|++++|++|+.||.|++||+.+
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGA---AIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCS---CEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cEEEEEecCCcEEEEECCCCCCccccceEEcccccCC---ceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999999999999999999886543 66666 34 345566679999999999999999999853
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.7e-29 Score=247.10 Aligned_cols=243 Identities=19% Similarity=0.277 Sum_probs=207.1
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~ 415 (604)
..+....+.+|...|.+++| |++++|++++.|+ .|++||+.++.....+. .|...|.+++|+|+++++++++.||.
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg--~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDG--TVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTS--EEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCC--cEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCe
Confidence 34677889999999999999 9999999999998 89999999988777665 57889999999999999999999999
Q ss_pred EEEEEcC----CCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECC-CCCEEE
Q psy10566 416 FYQCDIE----GQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-TDRLAL 488 (604)
Q Consensus 416 i~iwd~~----~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~ 488 (604)
|++|++. ++.+..+.++ .+.++.+ +++.+++++.|+.|++|| ..........+..++.++.+.| ++..++
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 9999984 2445556555 6888888 688999999999999999 3333334445788999999988 899999
Q ss_pred EEecCCeEEEEecCCCceeeEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
+++.|+.|++|| .......+.. +... +.++.+++++. +++|+.||.|++||+++++++..+.+|.+.|++++|
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~---i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDV---VRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSC---EEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEECCCCEEEEe--cCceEEEEeccCccc---EEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEE
Confidence 999999999999 4556666766 5554 34455568887 999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 568 NPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 568 sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|+ + .|++++.||.|++||+.+++
T Consensus 234 ~~~-~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 234 LPN-G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CTT-S-CEEEEETTSEEEEECTTTCC
T ss_pred ecC-C-CEEEEecCCEEEEEECCCCc
Confidence 999 5 58899999999999998875
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=9.4e-30 Score=258.33 Aligned_cols=245 Identities=15% Similarity=0.176 Sum_probs=200.6
Q ss_pred ccCCCcEEEEEEcCC---CCeEEEEECCCeEEEEEeCCCCceeE-eeEEeccCCCCeeEEE------ECCCCCeEEEEeC
Q psy10566 298 NDHCDEVWFCKFSPD---GLKLATGSKDTTVIIWDVDPVTFTCQ-HRKTLEGHTLGVAYLA------WSPDSSHLLVVGP 367 (604)
Q Consensus 298 ~~H~~~V~~v~fspd---g~~lasgs~dg~i~iwd~~~~~~~~~-~~~~l~~h~~~V~~l~------~spd~~~l~s~~~ 367 (604)
.+|.+.|.+++|+|+ |.+|++|+.||.|++||+. ... ....+.+|...|.+++ |+|++++|++++.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE----APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT----SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC----CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC
Confidence 379999999999999 6999999999999999998 333 5678889999999995 5789999999999
Q ss_pred CCceEEEEEECCCce-EEEEecC---CCCCCeEEEE----EecCCCEEEEEecCCeEEEEEcCCCeeeeeec--eeEEEE
Q psy10566 368 EDCHELWVWNIETEL-LRVKLNH---SPEDSLTSCS----WNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG--VRVNCL 437 (604)
Q Consensus 368 d~~~~i~vwd~~~~~-~~~~~~~---~~~~~v~~~~----~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~v~~l 437 (604)
|+ .|++||+.++. ....+.. .....+.+++ |+|++.++++++.||.|++||++......... ..+.++
T Consensus 138 d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~ 215 (357)
T 3i2n_A 138 DG--TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSL 215 (357)
T ss_dssp TS--CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CC--eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEE
Confidence 98 89999999886 4555432 1234788988 78899999999999999999996544433333 379999
Q ss_pred EEcC---CCCEEEEEeCCCeEEEEEcCCCcccccc------cCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCCC---
Q psy10566 438 WCRS---DGKSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRDR--- 504 (604)
Q Consensus 438 ~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~~--- 504 (604)
+|+| ++..+++++.||.|++||+++......+ .+...|.+++|+|++. ++++++.||.|++||++++
T Consensus 216 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred EcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 9999 9999999999999999999886654433 5788999999999998 8999999999999999864
Q ss_pred ----------------ceeeEeeccccceEEEEeeeCCCCCcEEE-EEeCCCcEEEEeCCCCcc
Q psy10566 505 ----------------ILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 505 ----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg~I~iwd~~~~~~ 551 (604)
+.+..+.+|... +..+.++|++++|+ +|+.||.|++||+.+.+.
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQP---ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSC---EEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccCCCCccccccccceeeccccCCCC---eeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 345666777664 44556679999888 899999999999987654
No 104
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.8e-28 Score=251.25 Aligned_cols=266 Identities=11% Similarity=0.073 Sum_probs=218.8
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeE-EEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL-LVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l-~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
.++++++.|+.|++||+. ..+....+..|. .+.+++|+|+++++ ++++.++ .|++||+.+++....+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~----~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~--~i~v~d~~~~~~~~~~~~~-- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVT----SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSN--DVSIIDTATNNVIATVPAG-- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETT----TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGT--EEEEEETTTTEEEEEEECS--
T ss_pred EEEEEcCCCCEEEEEECC----CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCC--eEEEEECCCCeEEEEEECC--
Confidence 468889999999999998 455667777665 48999999999987 4555677 8999999999988887643
Q ss_pred CCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCccccc
Q psy10566 393 DSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKSV-LAADTHHRIRTYNFEHLTDSNL 468 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~l-~~~~~dg~I~i~d~~~~~~~~~ 468 (604)
..+.+++|+|+++++++++ .++.|++||+. ++.+..+..+ .+.+++|+|+++.+ ++++.++.|++||+.+.+....
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 3899999999999886554 67999999995 5555555443 68999999999987 6778899999999998877777
Q ss_pred ccCCCCeeEEEECCCCCEE-EEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEe---CCCcEEEE
Q psy10566 469 LQEDHPVMSFTIDATDRLA-LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS---EDGKVYIW 544 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l-~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs---~dg~I~iw 544 (604)
+.....+.+++|+|+++.+ ++++.++.|++||+++++.+..+..+. .+..+.++|+++++++++ .++.|++|
T Consensus 154 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA----APSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS----EEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred EecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC----CccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 7767788999999999988 566778999999999998887776432 334456679999999888 68999999
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|+.+++.+..+..|. .+.+++|+|++..++++++.|+.|++||+.+++
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 999999999988775 479999999944455788999999999998764
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=9.9e-29 Score=255.49 Aligned_cols=281 Identities=16% Similarity=0.179 Sum_probs=195.8
Q ss_pred ccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC---CeEEEEeCCCceEE
Q psy10566 298 NDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS---SHLLVVGPEDCHEL 373 (604)
Q Consensus 298 ~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~---~~l~s~~~d~~~~i 373 (604)
.+|.+.|.+++|+| ++.+|++++.||.|++||+. .......+. +...+.++.|+|.+ .++++++.++ .|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v 168 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN----TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGP--KV 168 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETT----TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSS--SE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC----CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCC--eE
Confidence 46999999999999 77899999999999999998 344445554 77889999999854 4899999998 89
Q ss_pred EEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCC--eeeee-----------------ecee
Q psy10566 374 WVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIEGQ--VLDSW-----------------EGVR 433 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~-----------------~~~~ 433 (604)
++||+.++.....+. .|...|.+++|+|++. .+++++.||.|++||+... .+..+ ....
T Consensus 169 ~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 169 QLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp EEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred EEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 999999998877776 6788999999999998 5889999999999999422 22222 1236
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
|.+++|+|+++++++++.|+.|++||+.+......... ...+........+..+++++.++.|++||+.+++.+
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 99999999999999999999999999998765433221 122223333445567777888999999999999999
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
..+.+|...+.. +.++|++++|++|+.||.|++||+.+++++.....+. ....+.|.....+.+++.|+.+++|
T Consensus 328 ~~~~~~~~~v~~---~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 328 TMLKGHYKTVDC---CVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp EEECCCSSCEEE---EEEETTTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred eeeccCCCeEEE---EEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccCccCceeec
Confidence 999999875444 5557999999999999999999999998876655443 2234555435667788889999999
Q ss_pred CCCCC
Q psy10566 588 GPHLN 592 (604)
Q Consensus 588 ~~~~~ 592 (604)
+....
T Consensus 402 ~~~~~ 406 (408)
T 4a11_B 402 SHPQF 406 (408)
T ss_dssp -----
T ss_pred CCccc
Confidence 87653
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.6e-29 Score=261.94 Aligned_cols=255 Identities=18% Similarity=0.287 Sum_probs=209.5
Q ss_pred cceeecccCCCcEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCce---eEeeEEeccCCCCeeEEEECCCC-CeEEEEe
Q psy10566 292 ETTQVLNDHCDEVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFT---CQHRKTLEGHTLGVAYLAWSPDS-SHLLVVG 366 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~spd~-~~l~s~~ 366 (604)
.....+.+|.+.|++++|+| ++.+||+|+.||+|+|||+...... ......+.+|...|.+++|+|++ ..|++++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 45567889999999999999 9999999999999999999832111 14567888999999999999998 6899999
Q ss_pred CCCceEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeee-ece---eEEEEEEc
Q psy10566 367 PEDCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSW-EGV---RVNCLWCR 440 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~-~~~---~v~~l~~s 440 (604)
.|+ .|++||+.+++....+. ..|...|.+++|+|++++|++++.||.|++||++ ++.+..+ ..+ .+.++.|+
T Consensus 152 ~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 152 CDN--VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp TTS--CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC
T ss_pred CCC--EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc
Confidence 998 89999999999888884 4788999999999999999999999999999995 5666666 444 38899999
Q ss_pred CCCCEEEEE---eCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCce-eeEeec
Q psy10566 441 SDGKSVLAA---DTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRIL-LRKFQG 512 (604)
Q Consensus 441 ~~g~~l~~~---~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~-~~~~~~ 512 (604)
|++..++++ +.++.|++||+++... .....+...+.+++|+|++++++++ +.|+.|++||+.+++. +..+..
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE
T ss_pred CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc
Confidence 999999999 7999999999988654 2223467789999999999999754 4799999999999874 555555
Q ss_pred cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.. ...+..+.++|++.++++ .++.+++|++.+++.
T Consensus 310 ~~~-~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 310 FSS-KESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp ECC-SSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ccc-CCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 431 113444556789988775 567999999987654
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=4.2e-29 Score=262.09 Aligned_cols=242 Identities=14% Similarity=0.183 Sum_probs=198.6
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-----------EEEEecCCCC------------CCeEEEEEec
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-----------LRVKLNHSPE------------DSLTSCSWNR 402 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-----------~~~~~~~~~~------------~~v~~~~~~~ 402 (604)
|.+.|++++|+|++++|++++.|+ .|++||+.++. ....+. +|. ..|.+++|+|
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGG--RVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTS--EEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCC--eEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcC
Confidence 678999999999999999999998 89999998876 344554 676 7899999999
Q ss_pred CC--CEEEEEecCCeEEEEEcCCCee----------------------------------------eee-ece--eEEEE
Q psy10566 403 DG--TKFVCGGIRGQFYQCDIEGQVL----------------------------------------DSW-EGV--RVNCL 437 (604)
Q Consensus 403 ~~--~~l~s~~~dg~i~iwd~~~~~~----------------------------------------~~~-~~~--~v~~l 437 (604)
++ ..+++++.|+.|++||+..... ..+ .+| .|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 7999999999999999853111 111 233 69999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCC-Ccccc--------cccCCCCeeEEEECCCC-CEEEEEecCCeEEEEecCCCce-
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEH-LTDSN--------LLQEDHPVMSFTIDATD-RLALLNVSTQGVHLWDLRDRIL- 506 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~-~~~~~--------~~~~~~~i~~~~~s~~~-~~l~~~~~dg~I~lwd~~~~~~- 506 (604)
+|+|+++.++++ .|+.|++||+.. ..... ...+...|.+++|+|++ .++++++.||.|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 799999999984 32222 34678899999999998 9999999999999999999886
Q ss_pred ---eeEeeccccce---------EEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-CcceEEeeCCCCC------------
Q psy10566 507 ---LRKFQGVTQGQ---------FTIHSCFGGANQDFVASGSEDGKVYIWHVKR-ELPIATLSGHTRT------------ 561 (604)
Q Consensus 507 ---~~~~~~~~~~~---------~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~~~~~~l~~h~~~------------ 561 (604)
+..+.++.... ..+.++.++|++++|++++. |.|++||+++ ++++..+.+|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 67777765410 03455666799999999999 9999999997 8999999988642
Q ss_pred ---eeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 562 ---VSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 562 ---V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+..++|+|+ +.+|++|+.||.|++||+.+++
T Consensus 342 i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 342 IFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp GGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCC
T ss_pred cccceEEEECCC-CCEEEEeccCCEEEEEEcCCCc
Confidence 334999999 8899999999999999998775
No 108
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=3.3e-28 Score=242.85 Aligned_cols=262 Identities=16% Similarity=0.208 Sum_probs=215.7
Q ss_pred ccCccccccccCcCcCCCCccceee--cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQV--LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~--l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.|....+||... .++++. +.+|...|++++|+|+|++||+|+.||+|+||++. +.+.+..+.+|...
T Consensus 42 g~D~tV~iWd~~t------g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~----~~~~~~~~~~h~~~ 111 (318)
T 4ggc_A 42 ALDNSVYLWSASS------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ----QQKRLRNMTSHSAR 111 (318)
T ss_dssp EETTEEEEEETTT------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT----TTEEEEEEECCSSC
T ss_pred EeCCEEEEEECCC------CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC----CceeEEEecCccce
Confidence 3466677787543 344444 45788899999999999999999999999999998 56778889999988
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ce---
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QV--- 425 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--- 425 (604)
+.++.+ ++..+++++.++ .+++|+...+........+|...+..+.|.++++++++++.||.|++||+.. +.
T Consensus 112 ~~~~~~--~~~~l~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 112 VGSLSW--NSYILSSGSRSG--HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 187 (318)
T ss_dssp EEEEEE--ETTEEEEEETTS--EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC
T ss_pred EEEeec--CCCEEEEEecCC--ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc
Confidence 877655 567899999998 8999999887655555557889999999999999999999999999999942 21
Q ss_pred -eeeee--ceeEEEEEEcCCCCEE---EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--cCCeEE
Q psy10566 426 -LDSWE--GVRVNCLWCRSDGKSV---LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--STQGVH 497 (604)
Q Consensus 426 -~~~~~--~~~v~~l~~s~~g~~l---~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~I~ 497 (604)
..... ...+.++.+++++..+ ++++.++.|++||...........+...+..+.++|++..+++++ .|+.|+
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEE
Confidence 12222 2368899999977644 356678999999999988887788889999999999999988765 689999
Q ss_pred EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
+||+++++++.++.+|...+. ++.++|++++|++|+.||+|+|||+....
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~---~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVL---SLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEE---EEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEECCCCcEEEEEcCCCCCEE---EEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999988544 45667999999999999999999997654
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.1e-27 Score=246.75 Aligned_cols=289 Identities=15% Similarity=0.087 Sum_probs=230.1
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC-
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE- 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d- 368 (604)
.+....+.+|. .+.+++|+|+|+++ ++++.|++|++||+. +.+....+..+. .+.+++|+|+++++++++.+
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~----~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~ 95 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS 95 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECC----CCeEEEEEECCC-CccceEECCCCCEEEEEECCC
Confidence 35566777675 48999999999976 677789999999997 445566666554 89999999999988766654
Q ss_pred CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcC-CCeeeeeece-eEEEEEEcCCCCE
Q psy10566 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIE-GQVLDSWEGV-RVNCLWCRSDGKS 445 (604)
Q Consensus 369 ~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~-~~~~~~~~~~-~v~~l~~s~~g~~ 445 (604)
+ .|++||+.+++....+. +...+.+++|+|+++.+ ++++.++.|++||+. ++.+..+..+ .+.+++|+|+++.
T Consensus 96 ~--~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 96 S--TLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTK 171 (391)
T ss_dssp T--EEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSE
T ss_pred C--EEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCE
Confidence 5 89999999999887776 34568999999999977 678889999999994 5655555543 6789999999998
Q ss_pred E-EEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe---cCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 446 V-LAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV---STQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 446 l-~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
+ ++++.++.|++||+.+.+....+.+...+.+++|+|+++++++++ .++.|++||+.+++.+..+..+.. +.
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----~~ 247 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD----PA 247 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS----EE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC----cc
Confidence 7 567788999999999988777777778899999999999999988 689999999999998888877653 23
Q ss_pred eeeCCCCCcEE-EEEeCCCcEEEEeCCCCcceEEeeCCCCCee---EEEEcC------------C--C-------CcEEE
Q psy10566 522 SCFGGANQDFV-ASGSEDGKVYIWHVKRELPIATLSGHTRTVS---CVAWNP------------V--Y-------HQMIA 576 (604)
Q Consensus 522 ~~~~~~~~~~l-~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~---~v~~sp------------~--~-------~~~l~ 576 (604)
.+.++|+++++ ++++.|+.|++||+.+++.+..+..|..+.. .+.+.| + . ...+.
T Consensus 248 ~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~ 327 (391)
T 1l0q_A 248 GIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFT 327 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEE
T ss_pred EEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEE
Confidence 35557999877 6778899999999999999998887754421 122222 1 0 14567
Q ss_pred EEeCCCcEEEECCCCCC
Q psy10566 577 SVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 577 s~s~Dg~I~iW~~~~~~ 593 (604)
+.+.|..+++|++..+.
T Consensus 328 ~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 328 DLSKDATEWKWDFGDGS 344 (391)
T ss_dssp ECCBSCSEEEEECSSSC
T ss_pred eCCCCceEEEEECCCCc
Confidence 77789999999997765
No 110
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=3.5e-28 Score=237.20 Aligned_cols=285 Identities=12% Similarity=0.113 Sum_probs=191.9
Q ss_pred cceeecccCCC----cEEEEEEcCCCC---eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEE
Q psy10566 292 ETTQVLNDHCD----EVWFCKFSPDGL---KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV 364 (604)
Q Consensus 292 ~~~~~l~~H~~----~V~~v~fspdg~---~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s 364 (604)
+.+..|+...+ .|.++-|-.-|- .+++++ ...|++|+..+. ...+..+++.+|..+|..+.|.||...|++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 103 (356)
T 2w18_A 26 QLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDA-WQWEKLYTWHFAEVPVLQIVPVPDVYNLVC 103 (356)
T ss_dssp EEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSS-SBEEEEEEEECCSSCEEEECCCTTCCSCEE
T ss_pred eeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCC-ccceeeEEEeccCceeEEEEEcCcccceee
Confidence 33444444433 355666655443 677777 568999999843 355889999999999988888887655544
Q ss_pred EeCCC--ceEEEEEECCC-----ceEEEEecCCCCCCeEEEEEecCCCEEEEEe--cCCeEEEEEc--CCCeeeeeece-
Q psy10566 365 VGPED--CHELWVWNIET-----ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG--IRGQFYQCDI--EGQVLDSWEGV- 432 (604)
Q Consensus 365 ~~~d~--~~~i~vwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~- 432 (604)
..-.+ ...|+..-... +..... .++...|.++ ++++.+.+++ .|+.|++|++ +|+.+.....+
T Consensus 104 ~~~~~~~~~~v~sla~spd~~~~~~~l~s--~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~ 178 (356)
T 2w18_A 104 VALGNLEIREIRALFCSSDDESEKQVLLK--SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMP 178 (356)
T ss_dssp EEECSSSEEEEEEECC------CCEEEEE--EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECC
T ss_pred eeeccccccceEEEEECCCccccccEEEe--CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCC
Confidence 43322 01111111111 111111 1122223332 4444444433 4888888888 36666655444
Q ss_pred -eEEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCccccccc-C---CCCeeEEEECCCCCEE------------EEEec
Q psy10566 433 -RVNCLWCRS---DGKSVLAADTHHRIRTYNFEHLTDSNLLQ-E---DHPVMSFTIDATDRLA------------LLNVS 492 (604)
Q Consensus 433 -~v~~l~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~---~~~i~~~~~s~~~~~l------------~~~~~ 492 (604)
.+..++|++ ++..+++++.|++|++||+.+++....+. + ...+.+++|+|++.++ ++|+.
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 678888888 78999999999999999999988766664 2 2357788999999887 55778
Q ss_pred CCeEEEEecCCCceeeEee-----ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee-EEE
Q psy10566 493 TQGVHLWDLRDRILLRKFQ-----GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS-CVA 566 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~v~ 566 (604)
|++|++||..+++.+..+. +|.... +. .+.++.++++|+.||+|+|||+.+++++.++.+|...+. +++
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~--ls---g~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRF--LE---GDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCE--EE---EEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCccee--Ec---cccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 8999999999998876652 444331 11 122367899999999999999999999999999987655 689
Q ss_pred EcCCCCcEEEEEeCCCcEEEECC
Q psy10566 567 WNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 567 ~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|+|+ +.+|+||+.|++|||||+
T Consensus 334 fSPD-G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 334 WSGT-DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ECSS-SSEEEEECTTSCEEEEEE
T ss_pred ECCC-CCEEEEEECCCcEEEecC
Confidence 9999 899999999999999985
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.7e-28 Score=251.70 Aligned_cols=280 Identities=11% Similarity=0.052 Sum_probs=193.1
Q ss_pred EEEEE---cCCCCeEEEEECCCeEEEEEeCCCC------ceeEeeEEeccCCCCeeEEEE--------------------
Q psy10566 305 WFCKF---SPDGLKLATGSKDTTVIIWDVDPVT------FTCQHRKTLEGHTLGVAYLAW-------------------- 355 (604)
Q Consensus 305 ~~v~f---spdg~~lasgs~dg~i~iwd~~~~~------~~~~~~~~l~~h~~~V~~l~~-------------------- 355 (604)
.++.| +|++..|++++.|+.|.+|+..... .....+..+ .+..++..+.|
T Consensus 19 ~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (393)
T 4gq1_A 19 YTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGNVNSS 97 (393)
T ss_dssp EEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC----------C
T ss_pred eEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcceeec
Confidence 34445 4555445555568889999764211 111111111 23334444444
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEE----ecCCCCCCeEEEEEec--------CCCEEEEEecCCeEEEEEcC-
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVK----LNHSPEDSLTSCSWNR--------DGTKFVCGGIRGQFYQCDIE- 422 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~----~~~~~~~~v~~~~~~~--------~~~~l~s~~~dg~i~iwd~~- 422 (604)
++++.++++++.|+ +|++||..++..... ...+|.+.|.+++|+| |+++|++|+.|++|++||+.
T Consensus 98 ~~~~~~las~~~d~--~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDN--TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTS--CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCC--cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 44566899999998 899999998865432 2357999999999998 88999999999999999994
Q ss_pred CCeeeeeece--eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCccccc--------------------------ccCCC
Q psy10566 423 GQVLDSWEGV--RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNL--------------------------LQEDH 473 (604)
Q Consensus 423 ~~~~~~~~~~--~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~--------------------------~~~~~ 473 (604)
+..+....++ .+.+++|+|++. .+++++.|+.|++||+++...... ..+..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 4444444333 799999999875 799999999999999987543211 12456
Q ss_pred CeeEEEEC-CCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEE----------------EeeeCC-CCCcEEEEE
Q psy10566 474 PVMSFTID-ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTI----------------HSCFGG-ANQDFVASG 535 (604)
Q Consensus 474 ~i~~~~~s-~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i----------------~~~~~~-~~~~~l~sg 535 (604)
.+.++.|+ ++++.+++++.|+++++||+..+.....+..+......+ ..++++ .++.++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 67888876 899999999999999999998877666665444322211 122332 345577888
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+.||.|++||+.+++++..+.+|..+|++++|+|+ +++||++++|| +.+|++
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd-G~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD-GSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT-SSEEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC-CCEEEEEeCCC-eEEEEE
Confidence 99999999999999999999999999999999999 89999999877 555544
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-29 Score=262.27 Aligned_cols=243 Identities=14% Similarity=0.138 Sum_probs=201.0
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC-----CeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL-----GVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~-----~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
+|.+.|++|+|||||++||+++.||+|+|||.+ . ....+. |.. .|.+++|||||++|++++.|+ +|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG--tV 153 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN----K--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG--EL 153 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT----E--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS--EE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC----c--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC--EE
Confidence 568899999999999999999999999999965 2 555666 665 599999999999999999999 89
Q ss_pred EEEECCCceE-------EEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee----eeee-ce--eEEE
Q psy10566 374 WVWNIETELL-------RVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL----DSWE-GV--RVNC 436 (604)
Q Consensus 374 ~vwd~~~~~~-------~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~-~~--~v~~ 436 (604)
++||+.++.. +..+ ..+|...|.+++|+|+| +++++.|+.|++||+.+... ..+. ++ .|.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 9999998852 4444 24678899999999999 88999999999999965443 2342 44 5999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCcc-cccccCCCCeeEEEE--CCCCCEEEEEecCCeEEEEecCCCceeeEeecc
Q psy10566 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTD-SNLLQEDHPVMSFTI--DATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~ 513 (604)
++|+ |+.+++++ +++|++||+.+... ....+|...+..+++ +|++..+++++.+|+ ++|....
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~---------- 297 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE---------- 297 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS----------
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc----------
Confidence 9999 68888887 69999999998877 444478999999999 999999999999999 9999771
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
+ .++|++..+++. |+++++|+...+. +..+.+ ...|++++|+|+ +..+|+++.
T Consensus 298 ------~---~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPd-G~~lA~~~~ 350 (588)
T 2j04_A 298 ------L---HVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPD-GYSIAIVYD 350 (588)
T ss_dssp ------E---EEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTT-SSEEEEEEE
T ss_pred ------E---EECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCC-CCEEEEEEe
Confidence 1 135888777764 9999999976444 445554 677999999999 889998874
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.4e-28 Score=253.37 Aligned_cols=250 Identities=17% Similarity=0.303 Sum_probs=204.4
Q ss_pred eeecccCCCcEEEEEEcCC-CCeEEEEECCCeEEEEEeCCC------CceeEeeEEeccCCCCeeEEEECCCCC-eEEEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPV------TFTCQHRKTLEGHTLGVAYLAWSPDSS-HLLVV 365 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspd-g~~lasgs~dg~i~iwd~~~~------~~~~~~~~~l~~h~~~V~~l~~spd~~-~l~s~ 365 (604)
...+.+|.+.|++++|+|+ +.+||+++.||.|+||++... .........+.+|...|.+++|+|++. +|+++
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3456789999999999997 679999999999999999721 112566788899999999999999998 99999
Q ss_pred eCCCceEEEEEECCCceE-------EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCC----Ceeeeeece-
Q psy10566 366 GPEDCHELWVWNIETELL-------RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEG----QVLDSWEGV- 432 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~- 432 (604)
+.|+ .|++||+.++.. ...+ ..|...|.+++|+| ++..|++++.||.|++||++. +.+..+..+
T Consensus 201 ~~dg--~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 201 SDDH--TICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp CTTS--CEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred eCCC--eEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 9998 899999987321 1222 36888999999999 778999999999999999953 355555444
Q ss_pred -eEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC-ccc-ccccCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCC----
Q psy10566 433 -RVNCLWCRSDGK-SVLAADTHHRIRTYNFEHL-TDS-NLLQEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRD---- 503 (604)
Q Consensus 433 -~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~-~~~-~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~---- 503 (604)
.|.+++|+|++. .+++++.||.|++||++.. ... ....+...|.+++|+|++. ++++++.|+.|++||+..
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 799999999987 6889999999999999874 333 3345789999999999995 688999999999999987
Q ss_pred ----------CceeeEeeccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCC
Q psy10566 504 ----------RILLRKFQGVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 504 ----------~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~ 549 (604)
...+..+.+|...+ ..+.++|++. ++++++.||.|+||++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v---~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKI---SDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCE---EEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCc---eEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 24556666776644 4455678888 9999999999999998753
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=7e-28 Score=245.31 Aligned_cols=253 Identities=14% Similarity=0.206 Sum_probs=203.3
Q ss_pred eeEeeEEeccCCCCeeEEEECCC---CCeEEEEeCCCceEEEEEECCC-ceEEEEecCCCCCCeEEEEEecCCCEEEEEe
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPD---SSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd---~~~l~s~~~d~~~~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 411 (604)
....+..+.+|...|++++|+|+ |++|++++.|+ .|++||+.+ +.........|...|.+++|+|++++|++++
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN--DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTS--EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCC--cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 44556788899999999999999 59999999998 899999997 5555344447889999999999999999999
Q ss_pred cCCeEEEEEcCCCeeeeeece--eEEEEEE--cCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEE
Q psy10566 412 IRGQFYQCDIEGQVLDSWEGV--RVNCLWC--RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA 487 (604)
Q Consensus 412 ~dg~i~iwd~~~~~~~~~~~~--~v~~l~~--s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l 487 (604)
.||.|++||++.........+ .|.+++| +++++.+++++.|+.|++||+++.+....+.....+.++.+.+ ..+
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~ 183 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY--PMA 183 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET--TEE
T ss_pred CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC--Cee
Confidence 999999999965544444444 7999999 8999999999999999999999988777777667777776664 588
Q ss_pred EEEecCCeEEEEecCCCceeeEee-c-cccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCC---cceEEeeCCCC-
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQ-G-VTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRE---LPIATLSGHTR- 560 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~-~-~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~---~~~~~l~~h~~- 560 (604)
++++.++.+++||++......... . .......+....... ....+++|+.||.|++||+... ..+..+.+|..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 899999999999998764433222 1 122222332222111 2234999999999999999987 66888888876
Q ss_pred -----------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 561 -----------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 561 -----------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|++++|+|+ +.+|++++.||.|++||+.++.
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~-~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp ----CCCEEECCEEEEEECTT-TCCEEEEETTSCEEEEETTTTE
T ss_pred cccccccccccceEEEEEecC-CCEEEEEccCCeEEEEECCCCc
Confidence 7999999999 7899999999999999998764
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.3e-27 Score=242.95 Aligned_cols=241 Identities=13% Similarity=0.108 Sum_probs=185.7
Q ss_pred eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEE-EEEecCC
Q psy10566 336 TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRG 414 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg 414 (604)
....+..+..|...|.+++|+|||++|++++.++ +++||+.++........ ..+..+++.++++.+ ++++.|+
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~---~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS---FEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp -----------CCCCCEEEECTTSSEEEEECSSE---EEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSSTT
T ss_pred ccCCccccccCCCceEEEEECCCCCEEEEEcCCE---EEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECCcc
Confidence 3445566788999999999999999999888765 78999998877665442 247888999988877 5677889
Q ss_pred eEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-cccccccCCCCeeEEEECCCCCEEEE--
Q psy10566 415 QFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHL-TDSNLLQEDHPVMSFTIDATDRLALL-- 489 (604)
Q Consensus 415 ~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~-- 489 (604)
.|++||. +++.+..+... .|.++.++++. +++ ..++.|++||+.+. +....+.. +...+++++ .++++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~s 154 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSN 154 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEE
T ss_pred EEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeC
Confidence 9999998 46666665533 78999998764 333 34789999999887 44444433 555666777 56666
Q ss_pred EecCCeEEEEecCCCc----------------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc-EEEEeCCCCcce
Q psy10566 490 NVSTQGVHLWDLRDRI----------------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK-VYIWHVKRELPI 552 (604)
Q Consensus 490 ~~~dg~I~lwd~~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~-I~iwd~~~~~~~ 552 (604)
|+.+|.|++||+.++. .+..+.+|...+ .++.++|+|++|++|+.||+ |++||+.+++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v---~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI---KMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCE---EEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce---EEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 5789999999999865 267888888854 44566799999999999998 999999999999
Q ss_pred EEee-C-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 553 ATLS-G-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 553 ~~l~-~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.++. + |...|++++|+|+ +.+|++++.|++|++||+....
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEECTTCCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEcCCCCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCCC
Confidence 9998 6 9999999999999 8999999999999999998764
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=8.6e-28 Score=251.56 Aligned_cols=257 Identities=17% Similarity=0.299 Sum_probs=201.0
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
.+....+.+|.+.|++++| ++++|++|+.||+|++||+. +.+....+.+|...|.+++|++ ..+++++.|+
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg- 233 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN----TGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDR- 233 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS----SCCEEEEECCCCSCEEEEECCT--TEEEEEETTS-
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC----CCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCC-
Confidence 5677889999999999999 78899999999999999998 5567788999999999999975 4899999998
Q ss_pred eEEEEEECCCceEEE--EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece--eEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETELLRV--KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV--RVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~--~v~~l~~s~~g~~ 445 (604)
.|++||+.++.... ....+|...|.+++| +++++++|+.||.|++||+ .++.+..+.++ .+.++.+ +++.
T Consensus 234 -~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~ 308 (435)
T 1p22_A 234 -SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRL 308 (435)
T ss_dssp -CEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTE
T ss_pred -cEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCE
Confidence 89999998876442 334478889999999 7889999999999999999 46777777766 5778777 5789
Q ss_pred EEEEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc---------eeeEeecccc
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI---------LLRKFQGVTQ 515 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~---------~~~~~~~~~~ 515 (604)
+++++.||.|++||++++.....+. +...|.++++ ++.++++++.||.|++||+.++. .+..+.+|..
T Consensus 309 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~ 386 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 386 (435)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence 9999999999999999876655444 7788999998 78899999999999999998766 7788888888
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp 569 (604)
.+..+.. ++.+|++|+.||.|++||+.++....... ...+..++.|.+
T Consensus 387 ~v~~l~~-----~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 434 (435)
T 1p22_A 387 RVFRLQF-----DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYIS 434 (435)
T ss_dssp CCCCEEE-----CSSCEEECCSSSEEEEEC------------------------
T ss_pred CeEEEEe-----CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeeec
Confidence 6655532 67889999999999999998876554433 233455555543
No 117
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=2.7e-27 Score=234.39 Aligned_cols=226 Identities=16% Similarity=0.206 Sum_probs=182.8
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~ 347 (604)
..+.|....+|+.... ..+++.+|.+|.+.|++++|+|+ |++||+|+.|++|+|||+. .+.......+.+|.
T Consensus 26 s~s~D~~v~iw~~~~~----~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~--~~~~~~~~~~~~h~ 99 (297)
T 2pm7_B 26 TCSSDKTIKIFEVEGE----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE--NGRWSQIAVHAVHS 99 (297)
T ss_dssp EEETTSCEEEEEBCSS----CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS--SSCBCCCEEECCCS
T ss_pred EEeCCCEEEEEecCCC----CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC--CCceEEEEEeecCC
Confidence 3445667777775321 23467889999999999999874 8999999999999999998 33334566788899
Q ss_pred CCeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceE-EEEecCCCCCCeEEEEEecC-------------CCEEEEEe
Q psy10566 348 LGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELL-RVKLNHSPEDSLTSCSWNRD-------------GTKFVCGG 411 (604)
Q Consensus 348 ~~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~-------------~~~l~s~~ 411 (604)
..|.+++|+|+ +.+|++++.|+ +|++||+.++.. .......|...|.+++|+|+ +++|++|+
T Consensus 100 ~~v~~v~~~p~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs 177 (297)
T 2pm7_B 100 ASVNSVQWAPHEYGPMLLVASSDG--KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTS--EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEE
T ss_pred CceeEEEeCcCCCCcEEEEEECCC--cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc
Confidence 99999999998 88999999998 899999987632 11222368889999999997 57999999
Q ss_pred cCCeEEEEEcC-CC----eeeeeece--eEEEEEEcCCC---CEEEEEeCCCeEEEEEcCCCcc---ccc---ccCCCCe
Q psy10566 412 IRGQFYQCDIE-GQ----VLDSWEGV--RVNCLWCRSDG---KSVLAADTHHRIRTYNFEHLTD---SNL---LQEDHPV 475 (604)
Q Consensus 412 ~dg~i~iwd~~-~~----~~~~~~~~--~v~~l~~s~~g---~~l~~~~~dg~I~i~d~~~~~~---~~~---~~~~~~i 475 (604)
.|+.|++||++ +. ....+.+| .|.+++|+|++ .++++++.|++|++||+..... ... ..+...+
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v 257 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 257 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE
Confidence 99999999995 33 44566666 69999999985 8899999999999999987431 112 2456789
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
.+++|+|++++|++++.|+.|++|+...
T Consensus 258 ~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 258 WRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999999999999999999999999763
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-26 Score=243.70 Aligned_cols=234 Identities=13% Similarity=0.169 Sum_probs=195.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce---EEEEecC-----------------------------------
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---LRVKLNH----------------------------------- 389 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~----------------------------------- 389 (604)
.++.+++|+|+|++|++++ ++ .|++||+.+|+ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~--~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KN--CILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TT--EEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CC--eEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 4789999999999666654 55 79999999988 4444331
Q ss_pred ------------------CCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcC---CCeeeeeec----eeEEEEEEcCCC
Q psy10566 390 ------------------SPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIE---GQVLDSWEG----VRVNCLWCRSDG 443 (604)
Q Consensus 390 ------------------~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~---~~~~~~~~~----~~v~~l~~s~~g 443 (604)
.+...|.+++|+|++++| ++++.||.|++||+. ++.+..+.. ..+.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 123369999999999996 889999999999986 556666542 369999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCCccc-----ccccCCCCeeEEEECCC---CCEEEEEecCCeEEEEecCCCceeeE-eeccc
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDS-----NLLQEDHPVMSFTIDAT---DRLALLNVSTQGVHLWDLRDRILLRK-FQGVT 514 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~-----~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~I~lwd~~~~~~~~~-~~~~~ 514 (604)
+.+++++.+|.|++|++.+.... ....+...|.+++|+|+ ++++++++.|+.|++||++++..+.. +.+|.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 99999999999999999876654 34457889999999999 99999999999999999999988877 45777
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-------------------------CCCeeEEEEcC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-------------------------TRTVSCVAWNP 569 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-------------------------~~~V~~v~~sp 569 (604)
..+.. +.++ ++++|++|+.|+.|++||+.+++++..+..+ ...|.+++|+|
T Consensus 242 ~~v~~---~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 242 HFVSS---ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp SCEEE---EEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CceEE---EEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 75444 4556 9999999999999999999999988888632 35799999999
Q ss_pred CCCcEEEEEe-CCCcEEEECC
Q psy10566 570 VYHQMIASVS-DDCTVRIWGP 589 (604)
Q Consensus 570 ~~~~~l~s~s-~Dg~I~iW~~ 589 (604)
+ +.+|++++ .|+.|++|++
T Consensus 318 ~-~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 N-LPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp S-SSEEEEEETTCSEEEEEEE
T ss_pred C-CCEEEEEECCCCeEEEEEe
Confidence 9 78888888 8999999999
No 119
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=4.5e-27 Score=235.06 Aligned_cols=226 Identities=18% Similarity=0.198 Sum_probs=183.7
Q ss_pred ccccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC
Q psy10566 270 DESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347 (604)
Q Consensus 270 ~~~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~ 347 (604)
..+.|....+|+..... ...+..+.+|.+.|++++|+| ++++||+|+.|++|+|||+. ++.......+.+|.
T Consensus 30 sgs~D~~v~lwd~~~~~----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~--~~~~~~~~~~~~h~ 103 (316)
T 3bg1_A 30 TCSSDRSVKIFDVRNGG----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE--NGTWEKSHEHAGHD 103 (316)
T ss_dssp EEETTTEEEEEEEETTE----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS--SSCCCEEEEECCCS
T ss_pred EEeCCCeEEEEEecCCC----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC--CCcceEEEEccCCC
Confidence 34556677778753211 234678999999999999986 48999999999999999998 33334567788999
Q ss_pred CCeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceE--EEEecCCCCCCeEEEEEecC-----------------CCE
Q psy10566 348 LGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNRD-----------------GTK 406 (604)
Q Consensus 348 ~~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~-----------------~~~ 406 (604)
..|.+++|+|+ +.+|++++.|+ +|++||+.++.. .......|...|.+++|+|+ +++
T Consensus 104 ~~V~~v~~~p~~~g~~lasgs~D~--~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (316)
T 3bg1_A 104 SSVNSVCWAPHDYGLILACGSSDG--AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR 181 (316)
T ss_dssp SCCCEEEECCTTTCSCEEEECSSS--CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB
T ss_pred CceEEEEECCCCCCcEEEEEcCCC--CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce
Confidence 99999999998 78999999998 899999987632 22344578888999999997 478
Q ss_pred EEEEecCCeEEEEEcCC----Ceeeeeece--eEEEEEEcCCC----CEEEEEeCCCeEEEEEcCCCc-----ccccccC
Q psy10566 407 FVCGGIRGQFYQCDIEG----QVLDSWEGV--RVNCLWCRSDG----KSVLAADTHHRIRTYNFEHLT-----DSNLLQE 471 (604)
Q Consensus 407 l~s~~~dg~i~iwd~~~----~~~~~~~~~--~v~~l~~s~~g----~~l~~~~~dg~I~i~d~~~~~-----~~~~~~~ 471 (604)
|++|+.|+.|++||++. +.+..+.+| .|.+++|+|++ ..+++++.|++|++||+.+.. ......+
T Consensus 182 l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 261 (316)
T 3bg1_A 182 FASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF 261 (316)
T ss_dssp EECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC
T ss_pred EEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC
Confidence 99999999999999963 245566666 69999999986 889999999999999997631 1223346
Q ss_pred CCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
...|.+++|+|++.+|++++.|+.|++|+...
T Consensus 262 ~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 262 NDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp SSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 78999999999999999999999999999753
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.6e-27 Score=239.64 Aligned_cols=227 Identities=11% Similarity=0.066 Sum_probs=184.2
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC---------
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ--------- 424 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------- 424 (604)
.+.+++..+++++.|+ .|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.++.
T Consensus 43 ~~~~d~~~l~sg~~Dg--~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDG--ALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETT--EEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCC--cEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 4456788999999999 89999999998777765 356788889988 999999999999987532
Q ss_pred -eeeeee-c--eeEEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 425 -VLDSWE-G--VRVNCLWCRS--DGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 425 -~~~~~~-~--~~v~~l~~s~--~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
.+..+. + ..|.+++++| +++++++++.|+.|++||+++....... .+...+.+++|+|++.++++|+.||.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 233333 2 2599999999 9999999999999999999988765443 245579999999999999999999999
Q ss_pred EEEecCCCcee-eEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC---CCCCee--EEEEcC
Q psy10566 497 HLWDLRDRILL-RKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---HTRTVS--CVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~--~v~~sp 569 (604)
++||+++++.+ ..+.. |... +.++.++|++.+|++++ |+.|++||+++++.+..+.. |...+. +++|+|
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~---v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAK---IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSC---EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEEECCCCCCCccEEeccCCCC---EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 99999999887 77887 7774 44556679999999999 55999999999887665554 444454 699999
Q ss_pred CCCcEEEEEeC-CCcEEEECCCCCC
Q psy10566 570 VYHQMIASVSD-DCTVRIWGPHLNT 593 (604)
Q Consensus 570 ~~~~~l~s~s~-Dg~I~iW~~~~~~ 593 (604)
+ +.+|++++. |+.|++|++....
T Consensus 271 ~-g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 271 S-GKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp T-SSEEEEEETTTTEEEEEEECTTT
T ss_pred C-CCEEEEecCCCCcEEEEEEcccc
Confidence 9 899999998 9999999986654
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2e-26 Score=232.18 Aligned_cols=277 Identities=14% Similarity=0.108 Sum_probs=195.9
Q ss_pred ccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcC--CCCeEEEEECCCeEEEEEeCCCCc-----eeEeeEEec
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVDPVTF-----TCQHRKTLE 344 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fsp--dg~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~l~ 344 (604)
+.+....+|+.... ..+.+....+.+|.+.|++++|+| |+++|++|+.||+|++||+..... .......+.
T Consensus 30 ~~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 30 SSDQHIKVFKLDKD--TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp ETTSEEEEEEECSS--SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred eCCCeEEEEECCCC--CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec
Confidence 33556667765432 223356778899999999999999 699999999999999999984321 125678888
Q ss_pred cCCCCeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceEEEEec------------CCCCCCeEEEEEecC---CCEE
Q psy10566 345 GHTLGVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELLRVKLN------------HSPEDSLTSCSWNRD---GTKF 407 (604)
Q Consensus 345 ~h~~~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~------------~~~~~~v~~~~~~~~---~~~l 407 (604)
+|...|.+++|+|+ +.++++++.|+ .|++||+.+++....+. ..+...+.+++|+|+ +..+
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDG--ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTC--EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCC--cEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEE
Confidence 99999999999999 99999999998 89999998875332211 246678999999997 9999
Q ss_pred EEEecCCeEEEEEcCCCe---eeeeece--eEEEEEEcCCC----CEEEEEeCCCeEEEEEcCCCccccccc-CCCCeeE
Q psy10566 408 VCGGIRGQFYQCDIEGQV---LDSWEGV--RVNCLWCRSDG----KSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHPVMS 477 (604)
Q Consensus 408 ~s~~~dg~i~iwd~~~~~---~~~~~~~--~v~~l~~s~~g----~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~ 477 (604)
++++.++.+.+|+..... +..+.+| .|.+++|+|++ +.+++++.||.|++||++......... .......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 265 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNM 265 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------
T ss_pred EEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceec
Confidence 999999999888875432 4455554 79999999998 899999999999999998754332221 1222223
Q ss_pred EEECCCCCEEEEE----ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE
Q psy10566 478 FTIDATDRLALLN----VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553 (604)
Q Consensus 478 ~~~s~~~~~l~~~----~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~ 553 (604)
...++.......+ .....+.+|+....+.+..+.+|...+ ..+.++|++++|++|+.||.|+|||+.+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 266 FDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV---WSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp -------------------------CCSEEEEEEEEECTTSSCE---EEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred cCCCcccccccccccccccceeeeecccccccEEEEEecccccE---EEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 3333333333333 334456777777778888888888754 445667999999999999999999999886655
Q ss_pred Ee
Q psy10566 554 TL 555 (604)
Q Consensus 554 ~l 555 (604)
.+
T Consensus 343 ~~ 344 (351)
T 3f3f_A 343 CM 344 (351)
T ss_dssp EE
T ss_pred he
Confidence 44
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.8e-25 Score=233.52 Aligned_cols=285 Identities=7% Similarity=0.005 Sum_probs=219.7
Q ss_pred CCCcEEEEE---EcCCCCeEEEEE--------------CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeE
Q psy10566 300 HCDEVWFCK---FSPDGLKLATGS--------------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL 362 (604)
Q Consensus 300 H~~~V~~v~---fspdg~~lasgs--------------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l 362 (604)
....+..++ |+|++..++..+ .++.+.||.++...........+..+ ..+.+++|+|++..+
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 445677788 888877655432 23333566555323344556666655 446699999966666
Q ss_pred EEEeCCCceEEEEEECCCceEEEEec----CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeece--eEE
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKLN----HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGV--RVN 435 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~--~v~ 435 (604)
++++.++ .|++||+.+++...... ..|...|.+++|++++..+++++.|+.|++||++ ++.+..+..+ .+.
T Consensus 138 ~~~~~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~ 215 (433)
T 3bws_A 138 IPLLEDE--GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK 215 (433)
T ss_dssp EEBTTSS--SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE
T ss_pred EEeCCCC--eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee
Confidence 6666665 79999999998876432 2567789999999999999999999999999995 5666666543 699
Q ss_pred EEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe--------cCCeEEEEecCCCce
Q psy10566 436 CLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV--------STQGVHLWDLRDRIL 506 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------~dg~I~lwd~~~~~~ 506 (604)
+++|+|+++.+++++ .++.|++||+.+++....+.....+.+++++|+++.+++++ .|+.|++||+.+++.
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 999999999886554 79999999999887777676677799999999999999988 488999999999887
Q ss_pred eeEeeccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC-----
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD----- 580 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~----- 580 (604)
+..+. +... +..+.++|+++ ++++++.|+.|++||+.+++.+..+. +...+.+++|+|+ +.++++++.
T Consensus 296 ~~~~~-~~~~---~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~d-g~~l~~~~~~~~~~ 369 (433)
T 3bws_A 296 IDTIG-PPGN---KRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPD-GKYLYVSCRGPNHP 369 (433)
T ss_dssp EEEEE-EEEC---EEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTT-SSEEEEEECCCCCT
T ss_pred Eeecc-CCCC---cceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCC-CCEEEEEecCCCcc
Confidence 76653 2222 33345578886 45677899999999999999888876 6778999999999 677776665
Q ss_pred ----------CCcEEEECCCCCC
Q psy10566 581 ----------DCTVRIWGPHLNT 593 (604)
Q Consensus 581 ----------Dg~I~iW~~~~~~ 593 (604)
||.|++||+.+++
T Consensus 370 ~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 370 TEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp TTCTTSCCSSCCEEEEEETTTTE
T ss_pred ccccccccccceEEEEEECCCCc
Confidence 5799999998764
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=3.6e-26 Score=235.80 Aligned_cols=243 Identities=15% Similarity=0.080 Sum_probs=169.6
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCce-eEeeEEeccCCCCeeEEEECC--------CCCeEEEEeC
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFT-CQHRKTLEGHTLGVAYLAWSP--------DSSHLLVVGP 367 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~sp--------d~~~l~s~~~ 367 (604)
...|...+....+++++.+||+|+.|++|+|||+...... ......+.+|.+.|.+++|+| |+++|++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 3455666666677778889999999999999999833211 123445789999999999998 8899999999
Q ss_pred CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCC-EEEEEecCCeEEEEEcC-CCeeeee----------------
Q psy10566 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT-KFVCGGIRGQFYQCDIE-GQVLDSW---------------- 429 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~---------------- 429 (604)
|+ +|++||+.++....... .|...|.+++|+|++. +|++++.||+|++||+. ++.....
T Consensus 165 D~--tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~ 241 (393)
T 4gq1_A 165 DC--TLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT 241 (393)
T ss_dssp TS--EEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEES
T ss_pred CC--eEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccc
Confidence 98 99999998887766665 4678899999999874 79999999999999984 2221111
Q ss_pred ---------ece--eEEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCccccccc-CCCC------------------eeEE
Q psy10566 430 ---------EGV--RVNCLWCR-SDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-EDHP------------------VMSF 478 (604)
Q Consensus 430 ---------~~~--~v~~l~~s-~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-~~~~------------------i~~~ 478 (604)
.++ .+.++.|+ ++++.+++++.|+++++||+........+. +... ....
T Consensus 242 ~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 242 LPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp GGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCC
T ss_pred ccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeE
Confidence 011 35667765 899999999999999999997654332211 1111 1122
Q ss_pred EECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 479 TIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 479 ~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
.++| ++.++++|+.||.|++||+.++.....+.+|... |..+.|+|+|++||+++++| +.+|.+
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~---V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP---IVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC---EEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc---EEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 2333 3446677888999999999999988888877764 55567789999999999877 555554
No 124
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.5e-25 Score=223.51 Aligned_cols=225 Identities=16% Similarity=0.200 Sum_probs=185.7
Q ss_pred CccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCee
Q psy10566 274 ENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351 (604)
Q Consensus 274 ~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~ 351 (604)
+....+|+... ...+....+.+|.+.|++++|+|+ +.+|++|+.||.|++||+. .........+.+|...|.
T Consensus 32 dg~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~ 105 (379)
T 3jrp_A 32 DKTIKIFEVEG----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE--NGRWSQIAVHAVHSASVN 105 (379)
T ss_dssp TSCEEEEEEET----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEE
T ss_pred CCcEEEEecCC----CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC--CCceeEeeeecCCCcceE
Confidence 44556666431 134567789999999999999987 9999999999999999998 444457788889999999
Q ss_pred EEEECCC--CCeEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEec-------------CCCEEEEEecCC
Q psy10566 352 YLAWSPD--SSHLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNR-------------DGTKFVCGGIRG 414 (604)
Q Consensus 352 ~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~dg 414 (604)
+++|+|+ +.++++++.|+ .|++||+.++. ....+ ..|...|.+++|+| ++..+++++.||
T Consensus 106 ~~~~~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 182 (379)
T 3jrp_A 106 SVQWAPHEYGPLLLVASSDG--KVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 182 (379)
T ss_dssp EEEECCGGGCSEEEEEETTS--EEEEEECCTTSCCCEEEE-ECCTTCEEEEEECCCC----------CTTCEEEEEETTS
T ss_pred EEEeCCCCCCCEEEEecCCC--cEEEEecCCCCceeeEEe-cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC
Confidence 9999999 99999999998 89999998873 22223 36788999999999 699999999999
Q ss_pred eEEEEEcC-CC----eeeeeece--eEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCcc------cccccCCCCeeEE
Q psy10566 415 QFYQCDIE-GQ----VLDSWEGV--RVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLTD------SNLLQEDHPVMSF 478 (604)
Q Consensus 415 ~i~iwd~~-~~----~~~~~~~~--~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~~------~~~~~~~~~i~~~ 478 (604)
.|++||+. +. ....+.+| .|.+++|+|+ ++++++++.||.|++||+..... .....+...+.++
T Consensus 183 ~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 262 (379)
T 3jrp_A 183 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRA 262 (379)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEE
T ss_pred eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEE
Confidence 99999994 32 33445444 6999999999 89999999999999999988631 1222367889999
Q ss_pred EECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 479 TIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 479 ~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
+|+|+++++++++.||.|++||+......
T Consensus 263 ~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 263 SWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred EEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 99999999999999999999999865443
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1.8e-24 Score=231.51 Aligned_cols=274 Identities=13% Similarity=0.094 Sum_probs=220.7
Q ss_pred EEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC--CCceEEE
Q psy10566 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI--ETELLRV 385 (604)
Q Consensus 308 ~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~--~~~~~~~ 385 (604)
+|+|++.++++++.|++|.+||.. +.+.+.++..+.. +.+++|+|||+++++++.++ +|.+||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~----t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~--~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGD----SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDA--RIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETT----TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTS--EEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECC----CceEEEEEecCcc-cceEEECCCCCEEEEECCCC--eEEEEECcCCCCcEEE
Confidence 378899999999999999999988 5556677773333 89999999999999999997 8999999 8888888
Q ss_pred EecCCCCCCeEEEEEec----CCCEEEEEec-CCeEEEEEc-CCCeeeeeec-------------eeEEEEEEcCCCCE-
Q psy10566 386 KLNHSPEDSLTSCSWNR----DGTKFVCGGI-RGQFYQCDI-EGQVLDSWEG-------------VRVNCLWCRSDGKS- 445 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~-~~~~~~~~~~-------------~~v~~l~~s~~g~~- 445 (604)
.+. +...+..++|+| +|+++++++. +++|.+||. +++.+..+.. .++..+.+++++..
T Consensus 217 ~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 217 EIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 776 345689999999 9999999885 899999998 4666665543 15789999997765
Q ss_pred EEEEeCCCeEEEEEcCCCcccc--cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec----cccceE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSN--LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG----VTQGQF 518 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~----~~~~~~ 518 (604)
+++...++.|.+||..+.+... .+.....+..+.|+|+++++++++ .+++|.+||+.+++++..+.. |.....
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 5556678999999998765433 344566788899999999877665 588999999999999888874 332222
Q ss_pred EEEeeeCCCC-CcEEEEEe-CCCcEEEEeCCC-------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-------CCC
Q psy10566 519 TIHSCFGGAN-QDFVASGS-EDGKVYIWHVKR-------ELPIATLSGHTRTVSCVAWNPVYHQMIASVS-------DDC 582 (604)
Q Consensus 519 ~i~~~~~~~~-~~~l~sgs-~dg~I~iwd~~~-------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-------~Dg 582 (604)
. +.+|+ +.++++++ .|++|.+||+.+ ++++.++.+|.+.+..++++|+ ++.|++++ .++
T Consensus 375 ~----~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd-g~~l~v~~~~~~~~~~~~ 449 (543)
T 1nir_A 375 N----FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK-SSHLYVDTTFNPDARISQ 449 (543)
T ss_dssp E----EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-CCEEEECCTTCSSHHHHT
T ss_pred c----cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC-CCcEEEecCCCCCcccCc
Confidence 1 12355 66777776 589999999998 8999999999988999999999 78888876 278
Q ss_pred cEEEECCCCCCCC
Q psy10566 583 TVRIWGPHLNTNK 595 (604)
Q Consensus 583 ~I~iW~~~~~~~~ 595 (604)
+|.+||+.+.+..
T Consensus 450 ~v~v~d~~~~~~~ 462 (543)
T 1nir_A 450 SVAVFDLKNLDAK 462 (543)
T ss_dssp CEEEEETTCTTSC
T ss_pred eEEEEECCCCCCC
Confidence 9999999988744
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.2e-24 Score=225.72 Aligned_cols=282 Identities=11% Similarity=0.046 Sum_probs=212.8
Q ss_pred CCcEEEEEEcCCCC-eEEEEE----CCC----eEEEEEe--CCCCceeEeeEEeccCCCCeeEEEECC------------
Q psy10566 301 CDEVWFCKFSPDGL-KLATGS----KDT----TVIIWDV--DPVTFTCQHRKTLEGHTLGVAYLAWSP------------ 357 (604)
Q Consensus 301 ~~~V~~v~fspdg~-~lasgs----~dg----~i~iwd~--~~~~~~~~~~~~l~~h~~~V~~l~~sp------------ 357 (604)
...|...+|++.|. ++++|+ .|| +|+|||+ . ++.......+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGA--PGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSS--TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCC--CCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 35677888998886 666776 467 8999999 6 333323356888988888887775
Q ss_pred --CCCeEEEEeCC-Cc---eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---eEEEEEcCCCeeee
Q psy10566 358 --DSSHLLVVGPE-DC---HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDIEGQVLDS 428 (604)
Q Consensus 358 --d~~~l~s~~~d-~~---~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~ 428 (604)
.+..++.++.+ +. +.|++||+..+... .+. .|...+.+++|+|+|+.|++++.++ .|++||+.+.....
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQF-VVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCSCE-EEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCCCE-EEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE
Confidence 25566666654 11 48999999865433 332 3667899999999999999999885 99999996443344
Q ss_pred eece--eEEEEEEcCCCCEEE-EEeCCC--eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC-C--eEEEEe
Q psy10566 429 WEGV--RVNCLWCRSDGKSVL-AADTHH--RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST-Q--GVHLWD 500 (604)
Q Consensus 429 ~~~~--~v~~l~~s~~g~~l~-~~~~dg--~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~I~lwd 500 (604)
+..+ .+.+++|+|+|+.++ +++.++ .|++||+.+++...+..+...+.+++|+|+|+.|++++.+ + .|++||
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 4443 689999999999888 555555 4999999988776667777889999999999999988864 4 688889
Q ss_pred cCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC---CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEE
Q psy10566 501 LRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED---GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s 577 (604)
+.+++. ..+..+.. .+..+.++|+|++|++++.+ +.|++||+.+++. ..+..|. .+.+++|+|+ +.+|++
T Consensus 298 ~~~~~~-~~l~~~~~---~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spd-g~~l~~ 370 (415)
T 2hqs_A 298 INGGAP-QRITWEGS---QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPN-GTMVIY 370 (415)
T ss_dssp TTSSCC-EECCCSSS---EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTT-SSEEEE
T ss_pred CCCCCE-EEEecCCC---cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCC-CCEEEE
Confidence 988764 33333333 34445668999999988864 5899999998876 4566664 8999999999 777877
Q ss_pred EeCCC---cEEEECCCCCC
Q psy10566 578 VSDDC---TVRIWGPHLNT 593 (604)
Q Consensus 578 ~s~Dg---~I~iW~~~~~~ 593 (604)
++.|+ .|++|++..+.
T Consensus 371 ~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 371 SSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEETTEEEEEEEETTSCC
T ss_pred EEcCCCccEEEEEECCCCc
Confidence 77776 79999987553
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.1e-24 Score=226.23 Aligned_cols=263 Identities=14% Similarity=0.114 Sum_probs=208.4
Q ss_pred eecccCCCcEEEEEEcC--------------CCCeEEEEECC------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEE
Q psy10566 295 QVLNDHCDEVWFCKFSP--------------DGLKLATGSKD------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fsp--------------dg~~lasgs~d------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~ 354 (604)
..+.+|...+..+++++ .+..++.++.+ +.|++||++ . .....+.+|...|.+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~--g---~~~~~l~~~~~~v~~~~ 185 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD--G---YNQFVVHRSPQPLMSPA 185 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT--S---CSCEEEEEESSCEEEEE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC--C---CCCEEEeCCCCcceeeE
Confidence 56889999998888875 25667766654 799999987 2 23466777899999999
Q ss_pred ECCCCCeEEEEeCCC-ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEE-EEecCC--eEEEEEcCCCeeeeee
Q psy10566 355 WSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV-CGGIRG--QFYQCDIEGQVLDSWE 430 (604)
Q Consensus 355 ~spd~~~l~s~~~d~-~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~ 430 (604)
|+|||++|++++.++ ...|++||+.+++..... .+...+.+++|+|||+.|+ +++.++ .|++||+.+.....+.
T Consensus 186 ~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~--~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 186 WSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC
T ss_pred EcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee--cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc
Confidence 999999999998763 238999999999876433 3567899999999999888 566555 4999999655445555
Q ss_pred ce--eEEEEEEcCCCCEEEEEeCC-C--eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC---CeEEEEecC
Q psy10566 431 GV--RVNCLWCRSDGKSVLAADTH-H--RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---QGVHLWDLR 502 (604)
Q Consensus 431 ~~--~v~~l~~s~~g~~l~~~~~d-g--~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~I~lwd~~ 502 (604)
.+ .+.+++|+|+|+.+++++.+ + .|++||+.++....+..+...+.+++|+|+|+++++++.+ ..|++||+.
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 44 68899999999999888864 4 6888899887765555567788999999999999988875 579999999
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC---cEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG---KVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg---~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
+++.. .+..+. .+....++|+|++|++++.++ .|++||+. +.....+.+|.+.|.+++|+|.
T Consensus 344 ~~~~~-~l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 344 TGGVQ-VLSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp TCCEE-ECCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCC
T ss_pred CCCEE-EecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccc
Confidence 88764 344432 234456679999999998877 79999987 5667889999999999999997
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=7.8e-25 Score=213.63 Aligned_cols=209 Identities=14% Similarity=0.154 Sum_probs=150.7
Q ss_pred CcEEEEEEcCC----CCeEEEEEC--------------------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC
Q psy10566 302 DEVWFCKFSPD----GLKLATGSK--------------------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP 357 (604)
Q Consensus 302 ~~V~~v~fspd----g~~lasgs~--------------------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp 357 (604)
..|+.++|+|| ++++++++. |+.|++|++.+ .++.+..+.+|...++.++|+|
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---DGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT---TSCEEEEEEECCCSSCEEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC---CCceeeeeccCCCceeeEEeec
Confidence 46777777888 777777653 88888888852 2445667778888899999998
Q ss_pred ---CCCeEEEEeCCCceEEEEEECCCceEEEEecCCC--CCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece
Q psy10566 358 ---DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP--EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV 432 (604)
Q Consensus 358 ---d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 432 (604)
++..|++++.|+ +|++||+.+|+++..+..++ ...+.+++|+|+|..+++++.+..+ |
T Consensus 189 ~~g~~~~LaSgS~D~--TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~--w------------- 251 (356)
T 2w18_A 189 VQGMQEALLGTTIMN--NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK--E------------- 251 (356)
T ss_dssp EETSTTEEEEEETTS--EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------------
T ss_pred cCCCCceEEEecCCC--cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc--c-------------
Confidence 779999999999 99999999999998886332 3468888999999998887653321 2
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc------cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
.+++|+.|++|++||..+++....+ .+...+.+..+ ++.++++++.|++|+|||+.++++
T Consensus 252 ------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~ 317 (356)
T 2w18_A 252 ------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC 317 (356)
T ss_dssp ------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE
T ss_pred ------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 3678888888899988877654332 12223333333 377899999999999999999999
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+.++.+|...+. .++.|+|+|++|++|+.|++|+|||+
T Consensus 318 l~tL~gH~~~vv--s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 318 TALLPPVSDQHW--SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECCC--CCC--CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCeE--EEEEECCCCCEEEEEECCCcEEEecC
Confidence 999998876433 23466899999999999999999995
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=1.4e-23 Score=224.73 Aligned_cols=294 Identities=11% Similarity=0.061 Sum_probs=221.6
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC----CCCeEEEE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP----DSSHLLVV 365 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp----d~~~l~s~ 365 (604)
..+++.++..+.. +.+++|+|||++|++++.|++|.+||+.. .+.+.+..+. +...+..++|+| ||++++++
T Consensus 168 t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~--~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWA--KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTS--SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEE
T ss_pred CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcC--CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEE
Confidence 3456777773333 89999999999999999999999999921 1455667776 445689999999 99999998
Q ss_pred eC-CCceEEEEEECCCceEEEEecCC----------CCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCC-Ceee--eee
Q psy10566 366 GP-EDCHELWVWNIETELLRVKLNHS----------PEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEG-QVLD--SWE 430 (604)
Q Consensus 366 ~~-d~~~~i~vwd~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~-~~~~--~~~ 430 (604)
+. ++ +|.+||..+++++..+... ....+.++.++|++.. +++...++.|.+||... +.+. .+.
T Consensus 244 ~~~~~--~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 244 AYWPP--QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp EEESS--EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE
T ss_pred EccCC--eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec
Confidence 86 55 8999999999988776531 1236899999997765 55666789999999953 3222 222
Q ss_pred -ceeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCccccccc-----CCCCeeEEEECCC-CCEEEEEe-cCCeEEEEec
Q psy10566 431 -GVRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQ-----EDHPVMSFTIDAT-DRLALLNV-STQGVHLWDL 501 (604)
Q Consensus 431 -~~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~-----~~~~i~~~~~s~~-~~~l~~~~-~dg~I~lwd~ 501 (604)
+..+.++.|+|+|+++++++ .+++|.+||..+++....+. |......+ ++|+ +..++++. .+++|.+||+
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 23577899999999877655 58899999999987665544 22233333 4677 55555554 5799999999
Q ss_pred CC-------CceeeEeeccccceEEEEeeeCCCCCcEEEEEe-------CCCcEEEEeCCCCcce-EEe--------eCC
Q psy10566 502 RD-------RILLRKFQGVTQGQFTIHSCFGGANQDFVASGS-------EDGKVYIWHVKRELPI-ATL--------SGH 558 (604)
Q Consensus 502 ~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-------~dg~I~iwd~~~~~~~-~~l--------~~h 558 (604)
.+ .++++++.++...... +.++|++++|++++ .+++|.+||+.+++.. ..+ ..+
T Consensus 401 ~~~~~~~~~~~~v~~l~~~g~~~~~---v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQGQGGGSLF---IKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCCCC---EECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred CCCCCchhcCeEEEEEEcCCCCceE---EEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 98 8899999988765433 44579999999987 2779999999999887 443 356
Q ss_pred CCCeeEEEEcCCCCcEEEEEe----CCCcEEEECCCCCC
Q psy10566 559 TRTVSCVAWNPVYHQMIASVS----DDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~~~V~~v~~sp~~~~~l~s~s----~Dg~I~iW~~~~~~ 593 (604)
...+..+.|+|++..++++.. .|+.|.|||.++++
T Consensus 478 ~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 478 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 788999999999544444432 47999999999876
No 130
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.5e-25 Score=244.88 Aligned_cols=226 Identities=16% Similarity=0.194 Sum_probs=187.6
Q ss_pred ccCccccccccCcCcCCCCccceeecccCCCcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC
Q psy10566 272 SLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349 (604)
Q Consensus 272 ~~~~~~l~~d~~~~~~~~p~~~~~~l~~H~~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~ 349 (604)
+.+....+|+... -.......+.+|.+.|++++|+|+ +++|++|+.||+|++||+. ++.......+.+|...
T Consensus 28 ~~dg~I~vwd~~~----~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~--~~~~~~~~~~~~h~~~ 101 (753)
T 3jro_A 28 SSDKTIKIFEVEG----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE--NGRWSQIAVHAVHSAS 101 (753)
T ss_dssp ETTTEEEEEEEET----TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSC
T ss_pred ECCCcEEEEecCC----CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC--CCcccccccccCCCCC
Confidence 3455566676431 134667889999999999999998 9999999999999999998 4444577888899999
Q ss_pred eeEEEECCC--CCeEEEEeCCCceEEEEEECCCceE--EEEecCCCCCCeEEEEEec-------------CCCEEEEEec
Q psy10566 350 VAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELL--RVKLNHSPEDSLTSCSWNR-------------DGTKFVCGGI 412 (604)
Q Consensus 350 V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~ 412 (604)
|.+++|+|+ +..+++++.|+ .|++||+.++.. ...+ ..|...|.+++|+| ++..+++|+.
T Consensus 102 V~~v~~sp~~~~~~l~sgs~dg--~I~vwdl~~~~~~~~~~~-~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 102 VNSVQWAPHEYGPLLLVASSDG--KVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp EEEEEECCGGGCSEEEEEETTS--EEEEEECCSSSCCCCEEE-ECCSSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred eEEEEECCCCCCCEEEEEeCCC--cEEEEEeecCCCcceeEe-ecCCCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 999999999 99999999998 899999988732 2222 36788999999999 5899999999
Q ss_pred CCeEEEEEcCC-----Ceeeeeece--eEEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCc------ccccccCCCCee
Q psy10566 413 RGQFYQCDIEG-----QVLDSWEGV--RVNCLWCRSD---GKSVLAADTHHRIRTYNFEHLT------DSNLLQEDHPVM 476 (604)
Q Consensus 413 dg~i~iwd~~~-----~~~~~~~~~--~v~~l~~s~~---g~~l~~~~~dg~I~i~d~~~~~------~~~~~~~~~~i~ 476 (604)
||.|++||+.. .....+.+| .|.+++|+|+ ++.+++++.||.|++||+.+.. ......+...+.
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~ 258 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW 258 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCC
T ss_pred CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceE
Confidence 99999999943 334455554 6999999999 8999999999999999998863 222334678899
Q ss_pred EEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 477 SFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 477 ~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
+++|+|++.++++++.||.|++||+.++..
T Consensus 259 ~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 259 RASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp CEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 999999999999999999999999986543
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2e-24 Score=241.73 Aligned_cols=279 Identities=14% Similarity=0.128 Sum_probs=211.8
Q ss_pred CCcEEEEEEcCCCCeEEEEEC-CC-----eEEEEEeCCCCceeEeeEEeccCC------------------------CCe
Q psy10566 301 CDEVWFCKFSPDGLKLATGSK-DT-----TVIIWDVDPVTFTCQHRKTLEGHT------------------------LGV 350 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~-dg-----~i~iwd~~~~~~~~~~~~~l~~h~------------------------~~V 350 (604)
...|.+++|||||++|++++. |+ .|++||+. + .+....+..+. ..|
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~--~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIG--S--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETT--T--CCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECC--C--CceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 457999999999999999998 88 89999998 2 23333333332 348
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCc---eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETE---LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 427 (604)
.+++|||||++|++++. + .|++||+.++ ... .+. .+...+.+++|+|||++|++++ ++.|++||+.+....
T Consensus 112 ~~~~~SpDg~~l~~~~~-~--~i~~~d~~~~~~~~~~-~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-G--ELYLYDLKQEGKAAVR-QLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp CCCEECTTSSEEEEEET-T--EEEEEESSSCSTTSCC-BCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred ceeEECCCCCEEEEEeC-C--cEEEEECCCCCcceEE-Ecc-cCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 89999999999999887 4 7999999988 433 333 4557799999999999999887 469999999654443
Q ss_pred eeec-e-e-----------------EEEEEEcCCCCEEEEEeCCC---------------------------------eE
Q psy10566 428 SWEG-V-R-----------------VNCLWCRSDGKSVLAADTHH---------------------------------RI 455 (604)
Q Consensus 428 ~~~~-~-~-----------------v~~l~~s~~g~~l~~~~~dg---------------------------------~I 455 (604)
.+.. . . +..++|+|||+.|++++.|+ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 3321 1 1 47799999999999987765 78
Q ss_pred EEEEcCC-Ccccccc---cCCCCeeEEEECCCCCEEEEEec-----CCeEEEEecCCCceeeEeeccccc-eEEEEeeeC
Q psy10566 456 RTYNFEH-LTDSNLL---QEDHPVMSFTIDATDRLALLNVS-----TQGVHLWDLRDRILLRKFQGVTQG-QFTIHSCFG 525 (604)
Q Consensus 456 ~i~d~~~-~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~-----dg~I~lwd~~~~~~~~~~~~~~~~-~~~i~~~~~ 525 (604)
++||+.+ ++..... .+...+..++| |||+.|++++. +..|++||+.+++....+..+... ...+....+
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 9999988 6654433 34567899999 99999998764 467999999999877766654421 101223556
Q ss_pred CCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCCCCCeeEE-EEcCCCCcEEEEEeCCC--cEEEECCCC
Q psy10566 526 GANQDFVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCV-AWNPVYHQMIASVSDDC--TVRIWGPHL 591 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h~~~V~~v-~~sp~~~~~l~s~s~Dg--~I~iW~~~~ 591 (604)
+|+|+++++++.||.+.||.+. ++. ...+..|...|..+ .|+|++..++++++.|+ .++||+++.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 7999999999999988888765 455 78888888889887 59999444556677676 899998864
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=4.1e-23 Score=207.96 Aligned_cols=269 Identities=12% Similarity=0.148 Sum_probs=189.5
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC--CceE--EEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE--TELL--RVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~--~~~~--~~~~~~~ 390 (604)
.+++++.|+.|++|+++. ++.......+ .|...+.+++|+|+++++++++.++ +.|.+|++. ++.. +..+..
T Consensus 7 l~~~~~~~~~v~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~- 82 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNH-EGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESAL- 82 (343)
T ss_dssp EEEEEGGGTEEEEEEECT-TSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEEC-
T ss_pred EEEeCCCCCeEEEEEECC-CCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeecccccc-
Confidence 445557899999999963 2333344443 3777899999999999999988873 389999997 5553 333332
Q ss_pred CCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC-C---Ceeeeeece-eEEEEEEcCCCCEEEEEe-CCCeEEEEEcCC-
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE-G---QVLDSWEGV-RVNCLWCRSDGKSVLAAD-THHRIRTYNFEH- 462 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~-~---~~~~~~~~~-~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~- 462 (604)
...+..++|+|+++++++++. ++.|.+||++ + +....+... .+.+++|+|+++.+++++ .++.|.+||+.+
T Consensus 83 -~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 83 -PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp -SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred -CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 237889999999998877765 8899999992 2 233333332 578899999999888887 899999999987
Q ss_pred Ccccc------cccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCC--Cce--eeEeeccc---cceEEEEeeeCCCC
Q psy10566 463 LTDSN------LLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRD--RIL--LRKFQGVT---QGQFTIHSCFGGAN 528 (604)
Q Consensus 463 ~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~--~~~--~~~~~~~~---~~~~~i~~~~~~~~ 528 (604)
++... .......+..++|+|+++++++++ .++.|.+||+.. ++. ...+.... .....+..+.++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 43321 122345788899999999776665 789999999954 432 22222111 11112334556799
Q ss_pred CcEEEE-EeCCCcEEEEeCC--C--CcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEEEECCC
Q psy10566 529 QDFVAS-GSEDGKVYIWHVK--R--ELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVRIWGPH 590 (604)
Q Consensus 529 ~~~l~s-gs~dg~I~iwd~~--~--~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~iW~~~ 590 (604)
++++++ +..++.|++||+. + .+.+..+..+.. +.+++|+|+ +.+|++++ .|+.|.+|+++
T Consensus 242 g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d-g~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS-GKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT-SSEEEEECTTTCEEEEEEEE
T ss_pred CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC-CCEEEEecCCCCeEEEEEEc
Confidence 987774 4579999999998 3 345555665554 899999999 66666665 68999999554
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1e-22 Score=204.38 Aligned_cols=276 Identities=9% Similarity=0.051 Sum_probs=196.2
Q ss_pred EEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE-E
Q psy10566 307 CKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL-R 384 (604)
Q Consensus 307 v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~-~ 384 (604)
..|.+++. .+++++.++.|.+||.. +.+....+..+...+ +++|+|+++++++++... +.|++||..+++. .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~-~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTD----TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFC-QTLVQIETQLEPPKV 76 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETT----TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTT-CEEEEEECSSSSCEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCc----ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCC-CeEEEEECCCCceeE
Confidence 34666655 47788889999999988 334445555556667 999999999887777633 2899999999886 5
Q ss_pred EEecCCCCCCeEEEEEecCCCEEEEEecCC---eEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEE-eCCCe-EEE
Q psy10566 385 VKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---QFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAA-DTHHR-IRT 457 (604)
Q Consensus 385 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~-~~dg~-I~i 457 (604)
..+. .+..+..+++|+|++++++++..++ .|.+||+. ++.+..+.. ....+++|+|+|++++++ ..++. |.+
T Consensus 77 ~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 77 VAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred Eecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEE
Confidence 5444 3344444499999999999655553 89999995 555555543 357899999999866655 45577 999
Q ss_pred EEcCCCcc-----cccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCce---eeEeeccccceEEEEeeeCCCC
Q psy10566 458 YNFEHLTD-----SNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRIL---LRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 458 ~d~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
|++..... .........+..++|+|+++++++++ .++.|++||+.+++. +..+..... +..+.++|+
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~----~~~~~~spd 231 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL----PGTIVVSRD 231 (331)
T ss_dssp EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC----CCCEEECTT
T ss_pred EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC----CceEEECCC
Confidence 99875322 12234456689999999999766655 588999999999888 666654322 233456799
Q ss_pred CcEEEEEe-CCCcEEEEeCCCCcc--eEEeeCC----CC---CeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 529 QDFVASGS-EDGKVYIWHVKRELP--IATLSGH----TR---TVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 529 ~~~l~sgs-~dg~I~iwd~~~~~~--~~~l~~h----~~---~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|++++.++ .++.|.+||..+++. +..+..+ .. .+..++|+|++..+++++..++.|.+|++....
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 99776655 478899999999887 4444332 22 235689999944445666667899999998654
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=4.9e-23 Score=202.40 Aligned_cols=252 Identities=16% Similarity=0.146 Sum_probs=190.4
Q ss_pred EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-ceEEEEecCCCCCCeE
Q psy10566 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLT 396 (604)
Q Consensus 318 sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~-~~~~~~~~~~~~~~v~ 396 (604)
+++.|++|++||+. .... ..+..|...|.+++|+|++++|++++ ++ .|++||+.+ ++........+...+.
T Consensus 17 ~~~~~~~i~~~d~~----~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIR----TRKM-RVVWQTPELFEAPNWSPDGKYLLLNS-EG--LLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETT----TTEE-EEEEEESSCCEEEEECTTSSEEEEEE-TT--EEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCC----CCce-eeeccCCcceEeeEECCCCCEEEEEc-CC--eEEEEeCCCCCCceEecccccccccc
Confidence 34678999999997 2222 24455888999999999999999976 55 799999999 8776655434456789
Q ss_pred EEEEecCCCEEEEEec--CC--eEEEEEcCCCeeeeeec-eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcC--CCccccc
Q psy10566 397 SCSWNRDGTKFVCGGI--RG--QFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVL-AADTHHRIRTYNFE--HLTDSNL 468 (604)
Q Consensus 397 ~~~~~~~~~~l~s~~~--dg--~i~iwd~~~~~~~~~~~-~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~--~~~~~~~ 468 (604)
+++|+|+++++++++. ++ .|..++..+.....+.. ..+..++|+|+++.++ ++..++.+++|++. +.....+
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 9999999999999983 34 44555555444444433 3588899999999887 67788989999864 4444455
Q ss_pred ccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC--------
Q psy10566 469 LQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-------- 538 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-------- 538 (604)
..+...+.+++|+|+++.+++++ .++.+++|++. .+..+..+..+.. .+..+.++|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY---GDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE---EEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc---ccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 55677899999999999888776 48889999886 4555666665543 44556678999999988876
Q ss_pred ---CcEEEEeCCCCcc--eEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 539 ---GKVYIWHVKRELP--IATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 539 ---g~I~iwd~~~~~~--~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
+.|++||+.+++. +..+.+|...+.+++|+|+ +..|++++.|
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~ 292 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPD-GDEFAYVRYF 292 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTT-SSEEEEEEEC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCC-CCEEEEEEec
Confidence 5699999998876 4445578889999999999 6767666655
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.3e-21 Score=197.95 Aligned_cols=269 Identities=12% Similarity=0.072 Sum_probs=205.2
Q ss_pred CCCcEEEEEEcCCCCeEEEEEC-------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSK-------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~-------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
....+..++|+|+|+++++++. ++.|.+||.. +.+....+.. ...+..++|+|+++++++++..+ +.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~-~~ 112 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV----TLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVN-SA 112 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT----TCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTT-TE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC----CCeEEEEEec-CCCcceEEECCCCCEEEEEecCC-CE
Confidence 3456889999999998888774 5689999987 3344444443 34578899999999776665543 28
Q ss_pred EEEEECCCceEEEEecCCCCC--------CeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeeeee--ceeEEEEEE
Q psy10566 373 LWVWNIETELLRVKLNHSPED--------SLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDSWE--GVRVNCLWC 439 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~~~--~~~v~~l~~ 439 (604)
|.+||..+++....+...... .+.+++|+|+++.+++++ .++.|.+||.. ++....+. +..+.++++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 999999999987777643222 268899999999888776 47899999995 55555555 235788999
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCccccccc-----CCCCeeEEEECCCCCEEEEEecC-CeEEEEecCCCceeeEeecc
Q psy10566 440 RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-----EDHPVMSFTIDATDRLALLNVST-QGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~d-g~I~lwd~~~~~~~~~~~~~ 513 (604)
+|+|+.+++++.++.|.+||..+.+...... +...+..++++|+++++++++.+ +.|.+||+.+++.+..+...
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9999999999999999999999876654443 24457789999999988777654 89999999999888877754
Q ss_pred ccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGS-EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
.. ..+.++|+++++++++ .++.|.+||..+++.+..+..+ ..+.+++|+|+ +.+++.+..+
T Consensus 273 ~~-----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~v~~~~ 334 (353)
T 3vgz_A 273 ES-----LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSAD-GKTLYVSVKQ 334 (353)
T ss_dssp SC-----CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTT-SCEEEEEEEC
T ss_pred CC-----ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCC-CCEEEEEEcc
Confidence 32 1234468998665555 6899999999999998888754 46899999999 5544444444
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=1.6e-22 Score=203.18 Aligned_cols=265 Identities=9% Similarity=-0.027 Sum_probs=197.1
Q ss_pred CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-C-CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-L-GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~-~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
++|++++.++.|.+||.. +.+....+.... . .+..++|+|+++.+++++..+ +.|++||+.+++....+...+
T Consensus 2 ~~~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTE----KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-ESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETT----TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-TEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECC----CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-CeEEEEECCCCCeEeeEEcCC
Confidence 478999999999999997 344455554222 2 488999999998776655543 389999999998877665332
Q ss_pred C----CCeEEEEEecCCCEEEEEe------------cCCeEEEEEcC-CCeeeeee-ceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 392 E----DSLTSCSWNRDGTKFVCGG------------IRGQFYQCDIE-GQVLDSWE-GVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 392 ~----~~v~~~~~~~~~~~l~s~~------------~dg~i~iwd~~-~~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
. ..+.+++|+|+|+++++++ .++.|.+||+. ++.+..+. +..+.+++++|+|++++++ ++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SS
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CC
Confidence 1 2577899999999998886 57999999995 44444444 3357788999999988888 68
Q ss_pred eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC------------------------eEEEEecCCCceeeE
Q psy10566 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ------------------------GVHLWDLRDRILLRK 509 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------------------------~I~lwd~~~~~~~~~ 509 (604)
.|.+||+.+.+....+........+.++|++..+++....+ .|.+||+.+++.. .
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~ 233 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-M 233 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-E
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-E
Confidence 89999998876654443322112337889988776554332 4789999988765 3
Q ss_pred ee--ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 510 FQ--GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 510 ~~--~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
+. .+.. .+..+.++|++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+ +.+|++++.|+.|++|
T Consensus 234 ~~~~~~~~---~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 234 REVRIMDV---FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTD-GSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEEECSS---CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTT-SCEEEEESBSSEEEEE
T ss_pred eecCCCCC---ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCC-CCEEEEEcCCCcEEEE
Confidence 22 2222 22335567999999988 799999999999988887744 46789999999 6777778889999999
Q ss_pred CCCCCC
Q psy10566 588 GPHLNT 593 (604)
Q Consensus 588 ~~~~~~ 593 (604)
|+.+++
T Consensus 307 d~~~~~ 312 (337)
T 1pby_B 307 DAETLE 312 (337)
T ss_dssp ETTTCC
T ss_pred ECcCCc
Confidence 998875
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=1.2e-22 Score=226.78 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=200.0
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC---CeeEEEECCCCCeEEEEeCCCc-------eE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPDSSHLLVVGPEDC-------HE 372 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~spd~~~l~s~~~d~~-------~~ 372 (604)
.+.+++|+|||+++++ +.||+|++||+. +.+....+.+|.. .|.+++|||||++|++++.++. +.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~----~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVE----TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGG----GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECC----CCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 4677899999998876 689999999998 4444556666654 4999999999999999987521 37
Q ss_pred EEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeeece------------------
Q psy10566 373 LWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWEGV------------------ 432 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~------------------ 432 (604)
+++||+.+++...... ..+...+..++|+|||+.|+.++. +.|++||+.+ +.......+
T Consensus 93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 9999999987632221 133345889999999999999886 7999999964 333322221
Q ss_pred --eEEEEEEcCCCCEEEEEeCCC----------------------------------eEEEEEcCCCccccccc-C----
Q psy10566 433 --RVNCLWCRSDGKSVLAADTHH----------------------------------RIRTYNFEHLTDSNLLQ-E---- 471 (604)
Q Consensus 433 --~v~~l~~s~~g~~l~~~~~dg----------------------------------~I~i~d~~~~~~~~~~~-~---- 471 (604)
.+.+++|+|||+.|++++.++ .|++||+.+.+....+. +
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 127899999999999887553 79999998876433222 2
Q ss_pred --CCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCceeeEeeccccc-eEE-EEeeeCCCCCcEEEE--EeCCC--
Q psy10566 472 --DHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRILLRKFQGVTQG-QFT-IHSCFGGANQDFVAS--GSEDG-- 539 (604)
Q Consensus 472 --~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~~~~~~~~~~~~-~~~-i~~~~~~~~~~~l~s--gs~dg-- 539 (604)
...+..++|+|||+++++.... ..|++||+.+++....+..+... ... .....++|+|+.|+. +..++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 4578899999999988776543 57999999998877665443221 110 013456799997664 45667
Q ss_pred ----cEEEEe-CCCCcc--eEEeeCCCCCeeE-EEEcCCCCcEEEEE-eCC--CcEEEECCCCC
Q psy10566 540 ----KVYIWH-VKRELP--IATLSGHTRTVSC-VAWNPVYHQMIASV-SDD--CTVRIWGPHLN 592 (604)
Q Consensus 540 ----~I~iwd-~~~~~~--~~~l~~h~~~V~~-v~~sp~~~~~l~s~-s~D--g~I~iW~~~~~ 592 (604)
.|++|| ..++.. ...+..+...+.. ++|+|+ +..|+.. ..+ +.+++|+++..
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK-GNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT-TTEEEEEESSSCTTCCEEEEECSS
T ss_pred cceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCC-CCEEEEEEcCCCCcceEEEEEeCC
Confidence 577788 344441 5555544444554 699999 5666544 444 88999998654
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=5.3e-22 Score=230.10 Aligned_cols=288 Identities=9% Similarity=0.014 Sum_probs=208.3
Q ss_pred ceeecccCCCcEEEEEEcCCCCeEEEEECC----C--eEEEEEeCCCCceeEeeEEeccCCCCe-------eEEEECCCC
Q psy10566 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKD----T--TVIIWDVDPVTFTCQHRKTLEGHTLGV-------AYLAWSPDS 359 (604)
Q Consensus 293 ~~~~l~~H~~~V~~v~fspdg~~lasgs~d----g--~i~iwd~~~~~~~~~~~~~l~~h~~~V-------~~l~~spd~ 359 (604)
....+.+|.+.|.+++|||||++||+++.+ + .|++|++. ++ . ...+..|...+ .+++|+|||
T Consensus 44 ~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~--~g--~-~~~lt~~~~~~~~~~~~~~~~~~SpDg 118 (1045)
T 1k32_A 44 STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGE--NG--E-IKRITYFSGKSTGRRMFTDVAGFDPDG 118 (1045)
T ss_dssp CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETT--TT--E-EEECCCCCEEEETTEECSEEEEECTTC
T ss_pred cEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECC--CC--C-eEEcccCCCcccccccccccccCCCCC
Confidence 356788899999999999999999988654 3 78999987 22 2 46778888888 999999999
Q ss_pred CeEEEEeCC----CceEEEEEECCCceEEEEec-----------------------------------------------
Q psy10566 360 SHLLVVGPE----DCHELWVWNIETELLRVKLN----------------------------------------------- 388 (604)
Q Consensus 360 ~~l~s~~~d----~~~~i~vwd~~~~~~~~~~~----------------------------------------------- 388 (604)
+.+++++.+ +...|+.|++.++.......
T Consensus 119 ~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~ 198 (1045)
T 1k32_A 119 NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKK 198 (1045)
T ss_dssp CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEE
T ss_pred EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEE
Confidence 966666644 33378999887665321110
Q ss_pred -CCCCCCeEEEEEecCCCEEEEEecCCeEEEEE-----------------------------------------cCCCee
Q psy10566 389 -HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD-----------------------------------------IEGQVL 426 (604)
Q Consensus 389 -~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd-----------------------------------------~~~~~~ 426 (604)
..|...+.++.|+++ ..+++++.++.+.+|. +.+..+
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKI 277 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEe
Confidence 122334445555554 3444444455555554 322222
Q ss_pred eeeece-------------eEEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCcccccccCCC-CeeEEEECCCCCEEEEEe
Q psy10566 427 DSWEGV-------------RVNCLWCR-SDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-PVMSFTIDATDRLALLNV 491 (604)
Q Consensus 427 ~~~~~~-------------~v~~l~~s-~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~ 491 (604)
..+.+. .+..++|+ |+|+.+++++ ++.|.+|+...........+.. .+..++|+ +|+.+++++
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s 355 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGT 355 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEE
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEE
Confidence 222221 35678888 8888887777 7788888887766555555555 78899999 999999998
Q ss_pred cCCeEE-EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 492 STQGVH-LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 492 ~dg~I~-lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
.++.+. +||+.+++... +.++... +..+.++|+|++|++++.++.|++||+.+++....+.+|.+.+.+++|+|+
T Consensus 356 ~~~~l~~~~d~~~~~~~~-l~~~~~~---~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEK-FEENLGN---VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp TTEEEEEEEETTTCCEEE-CCCCCCS---EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred CCCceEEEEECCCCCceE-ecCCccc---eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 888898 99998775543 3344443 344566899999999999999999999999988888889999999999999
Q ss_pred CCcEEEEEeCCC----------cEEEECCCCCC
Q psy10566 571 YHQMIASVSDDC----------TVRIWGPHLNT 593 (604)
Q Consensus 571 ~~~~l~s~s~Dg----------~I~iW~~~~~~ 593 (604)
+.+|++++.++ .|++||+.++.
T Consensus 432 -G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 432 -SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp -SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred -CCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 77777776654 89999998764
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.8e-22 Score=215.33 Aligned_cols=273 Identities=12% Similarity=0.013 Sum_probs=200.6
Q ss_pred CCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeC---CCceEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGP---EDCHELWV 375 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~---d~~~~i~v 375 (604)
..+|++++|+|||++||+++. ||++.||+++ . .. ...+..|. ..+.+++|+|| +.+++++. +....++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~--~--g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYD--G--GE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEE--T--TE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEc--C--CC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 457999999999999999887 9999999986 2 22 24445555 68999999999 67776664 23224555
Q ss_pred EEC--CCceEEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCC
Q psy10566 376 WNI--ETELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 376 wd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~d 452 (604)
++. ..+.. .+.. ...+...+|+|+++. +++.+.++.+.+||+++.....+......+++|+|||+.+++++.+
T Consensus 95 ~~~~~~g~~~--~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 95 VNTSRPGEEQ--RLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp EETTSTTCCE--ECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred EeccCCCccc--cccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEc
Confidence 665 33333 3332 223557789998864 3344445555699996655544444433889999999999988877
Q ss_pred ----CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC--eEEEEecCCCceeeEeeccccceEEE-----E
Q psy10566 453 ----HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ--GVHLWDLRDRILLRKFQGVTQGQFTI-----H 521 (604)
Q Consensus 453 ----g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~I~lwd~~~~~~~~~~~~~~~~~~~i-----~ 521 (604)
+.|++||+.+++...+..+...+..++|+|||+.|+++..++ .|++||+.+++.. .+.++...+..+ .
T Consensus 171 ~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp ETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 789999999888777777778899999999999999888888 8999999998777 555554322111 1
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCc---EEEECCCC
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT---VRIWGPHL 591 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~---I~iW~~~~ 591 (604)
...++|+|.++++++.||.+++|++ |+... .+.+.|.+++|+ + +.++++++.+.+ +.+|+...
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTCC
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-C-CEEEEEEcCCCCCCeEEEEcCCC
Confidence 1226799999999999999999999 66544 345778999999 7 788888887744 77777654
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=1.9e-21 Score=216.41 Aligned_cols=277 Identities=11% Similarity=0.024 Sum_probs=201.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC-
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET- 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~- 380 (604)
..|.+++|||| ++++.+. ++.|++||+. ++ .. ..+..+...+.+++|||||+.|+++ .++ .|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~--~~--~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~--~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDML--AR--KV-TYLFDTNEETASLDFSPVGDRVAYV-RNH--NLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETT--TT--EE-EEEECCTTCCTTCEECTTSSEEEEE-ETT--EEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECC--CC--ce-EEccCCcccccCCcCCCCCCEEEEE-ECC--eEEEEecCcc
Confidence 56999999999 6565553 6999999997 22 22 3344567789999999999999986 455 799999998
Q ss_pred ----ceEEEEecCCCCC-------------CeEEEEEecCCCEEEEEe--------------------------------
Q psy10566 381 ----ELLRVKLNHSPED-------------SLTSCSWNRDGTKFVCGG-------------------------------- 411 (604)
Q Consensus 381 ----~~~~~~~~~~~~~-------------~v~~~~~~~~~~~l~s~~-------------------------------- 411 (604)
++........... .+.+++|+|||++|++++
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 7765544322221 148899999999999987
Q ss_pred -cCCeEEEEEcCCCeeeeee-----ceeEEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCC-cccccccC--C---CC
Q psy10566 412 -IRGQFYQCDIEGQVLDSWE-----GVRVNCLWCRSDGKSVLAADTHH-----RIRTYNFEHL-TDSNLLQE--D---HP 474 (604)
Q Consensus 412 -~dg~i~iwd~~~~~~~~~~-----~~~v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~-~~~~~~~~--~---~~ 474 (604)
.+..|++||+++....... ...+.+++|+|||+.+++++.++ .|++||+.++ ........ . ..
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 4468999999654433322 23689999999999999987775 8999999887 33333321 1 12
Q ss_pred eeEEEECC--CCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-CC----cEEEEeC
Q psy10566 475 VMSFTIDA--TDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DG----KVYIWHV 546 (604)
Q Consensus 475 i~~~~~s~--~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg----~I~iwd~ 546 (604)
+.+++|+| +|++++++..++.+++|++. ++..+..+..+...+.. ...++|+++.|+.++. ++ .|+.||.
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~--~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN--FAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE--EEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe--eeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 46789999 99999999999999999886 56666777665543322 2456799987765554 44 6778888
Q ss_pred CCCcceEEeeCCCCCeeEEEEcCCCCcEEEEE-eCC---CcEEEECCCCCC
Q psy10566 547 KRELPIATLSGHTRTVSCVAWNPVYHQMIASV-SDD---CTVRIWGPHLNT 593 (604)
Q Consensus 547 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~-s~D---g~I~iW~~~~~~ 593 (604)
.+++ ...+. |...+.+++|+|+ +.+++.. +.+ +.|++|++.+++
T Consensus 390 ~~~~-~~~l~-~~~~~~~~~~spd-g~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 390 KGGK-TKDLT-PESGMHRTQLSPD-GSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCCC-CEESC-CSSSEEEEEECTT-SSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCC-ceecc-CCCceEEEEECCC-CCEEEEEecCCCCCcEEEEEECCCCe
Confidence 7766 44454 6778999999999 5555544 443 569999998764
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=8e-21 Score=191.17 Aligned_cols=263 Identities=10% Similarity=0.056 Sum_probs=187.6
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECC-CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKD-TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~d-g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd 377 (604)
.|...+.+++|+|+|++|++++.+ +.|.+|+++..++....+..+..+. .+.+++|+|+++++++++.++ +.|.+||
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~-~~i~~~d 112 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNA-GNVSVTR 112 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCC-CeEEEEE
Confidence 477889999999999999988876 9999999974444555555665544 789999999999888777633 3899999
Q ss_pred CC---CceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC--CCeee----ee---eceeEEEEEEcCCCC
Q psy10566 378 IE---TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE--GQVLD----SW---EGVRVNCLWCRSDGK 444 (604)
Q Consensus 378 ~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~--~~~~~----~~---~~~~v~~l~~s~~g~ 444 (604)
+. +......+. ....+.+++|+|+++++++++ .++.|.+||+. ++... .. .+..+..++|+|+++
T Consensus 113 ~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 113 LEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred CCCCcccccccccc--CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 94 444444443 334588999999999888887 89999999995 33322 11 123678899999999
Q ss_pred EEEEEe-CCCeEEEEEcCC--Cccc--cc---cc----CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecC--CC--cee
Q psy10566 445 SVLAAD-THHRIRTYNFEH--LTDS--NL---LQ----EDHPVMSFTIDATDRLALLNV-STQGVHLWDLR--DR--ILL 507 (604)
Q Consensus 445 ~l~~~~-~dg~I~i~d~~~--~~~~--~~---~~----~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~--~~--~~~ 507 (604)
++++++ .++.|.+||+.. +... .. .. ....+..++|+|++++++++. .++.|.+||+. ++ +.+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 776655 789999999954 2211 11 11 123566899999999887555 68999999998 22 334
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEe--CCCCcc--eEEeeCCCCCeeEEEEcCC
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGS-EDGKVYIWH--VKRELP--IATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd--~~~~~~--~~~l~~h~~~V~~v~~sp~ 570 (604)
..+..+.. +..+.++|+|+++++++ .++.|.+|+ ..+++. +..+.. .....+++|.|+
T Consensus 271 ~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~ 333 (343)
T 1ri6_A 271 GFQPTETQ----PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAH 333 (343)
T ss_dssp EEEECSSS----CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEE
T ss_pred eeecCCCc----cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcc
Confidence 44433322 33355679999888887 589999995 446643 444443 245677888776
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=7.8e-22 Score=220.73 Aligned_cols=278 Identities=10% Similarity=0.053 Sum_probs=203.4
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.|.+++|||||++|++++. +.|++||+..... .....+..|...+.+++|||||++|++++.+ .|++||+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~--~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~---~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK--AAVRQLTHGEGFATDAKLSPKGGFVSFIRGR---NLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST--TSCCBCCCSSSCEEEEEECTTSSEEEEEETT---EEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc--ceEEEcccCCcccccccCCCCCCEEEEEeCC---cEEEEecCCCC
Confidence 4889999999999999986 9999999982200 0234566788889999999999999998754 69999999987
Q ss_pred EEEEecCCCCCC----------------eEEEEEecCCCEEEEEecCC--------------------------------
Q psy10566 383 LRVKLNHSPEDS----------------LTSCSWNRDGTKFVCGGIRG-------------------------------- 414 (604)
Q Consensus 383 ~~~~~~~~~~~~----------------v~~~~~~~~~~~l~s~~~dg-------------------------------- 414 (604)
....... +... +.+++|+|||++|++++.|+
T Consensus 184 ~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 184 QMQLTAD-GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEECCCC-CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred EEEeccC-CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 6654432 2221 47899999999999998765
Q ss_pred -eEEEEEcCC-Ceeeeee-----ceeEEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCcccccccCCC-----CeeE
Q psy10566 415 -QFYQCDIEG-QVLDSWE-----GVRVNCLWCRSDGKSVLAADT-----HHRIRTYNFEHLTDSNLLQEDH-----PVMS 477 (604)
Q Consensus 415 -~i~iwd~~~-~~~~~~~-----~~~v~~l~~s~~g~~l~~~~~-----dg~I~i~d~~~~~~~~~~~~~~-----~i~~ 477 (604)
.|.+||+++ ....... ...+..++| |||+.+++++. +..|++||+.+++......... .+..
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 788899865 4333322 246889999 99999987764 5679999999877655544322 4568
Q ss_pred EEECCCCCEEEEEecCCeEEEEecC-CCceeeEeeccccceEEEEeeeCCCCCcEEE-EEeCCC--cEEEEeCCC-Ccce
Q psy10566 478 FTIDATDRLALLNVSTQGVHLWDLR-DRILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDG--KVYIWHVKR-ELPI 552 (604)
Q Consensus 478 ~~~s~~~~~l~~~~~dg~I~lwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg--~I~iwd~~~-~~~~ 552 (604)
++|+|+|++++++..+|.+++|.+. ++. ...+..+...+..+ ..++|+++.|+ +++.++ .++||++.. +...
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~ 418 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDEL--LAVDEKAGLAYFRAGIESARESQIYAVPLQGGQP 418 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEE--EEEETTTTEEEEEECSSCTTCBEEEEEETTCCCC
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeE--eEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCe
Confidence 9999999988888889987777765 344 66666655443322 34679998765 455555 899999874 6667
Q ss_pred EEeeCCCCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCCCC
Q psy10566 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPHLN 592 (604)
Q Consensus 553 ~~l~~h~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~~~ 592 (604)
..+.. ...+.+++|+|++..++++++.. +.+.+|+...+
T Consensus 419 ~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 419 QRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred eeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 77775 66789999999944444444443 46888887543
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.4e-21 Score=226.65 Aligned_cols=282 Identities=12% Similarity=0.054 Sum_probs=225.2
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEE
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHEL 373 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i 373 (604)
...+.+|.+.+.++.|+++ .++++++.|+++.||.++... .....+..|. .+...+|+|||+.++++. ++ .|
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g---~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~--~i 267 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDG---KDLRKHTSFT-DYYPRHLNTDGRRILFSK-GG--SI 267 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTS---CSCEECCCCC-SSCEEEEEESSSCEEEEE-TT--EE
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCC---CcceEecCCC-CcceeeEcCCCCEEEEEe-CC--EE
Confidence 3455899999999999998 677778888999999886322 2234555554 467789999999998875 55 79
Q ss_pred EEEECCCceEEEEecCC----------CCCCeEEEEEe-cCCCEEEEEecCCeEEEEEcCCCeeeeeece---eEEEEEE
Q psy10566 374 WVWNIETELLRVKLNHS----------PEDSLTSCSWN-RDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV---RVNCLWC 439 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~----------~~~~v~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~v~~l~~ 439 (604)
++||+...... .+... +...+.+++|+ |+|+.+++++ ++.+.+|++.+.....+..+ .+..++|
T Consensus 268 ~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1045)
T 1k32_A 268 YIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGG 345 (1045)
T ss_dssp EEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECS
T ss_pred EEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeE
Confidence 99999555443 44321 23368999999 9999999888 88999999965544444332 6889999
Q ss_pred cCCCCEEEEEeCCCeEE-EEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceE
Q psy10566 440 RSDGKSVLAADTHHRIR-TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQF 518 (604)
Q Consensus 440 s~~g~~l~~~~~dg~I~-i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~ 518 (604)
+ +|+.+++++.++.+. +||+.+.....+..+...+..++|+|+|+++++++.++.|++||+.+++......++....
T Consensus 346 s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v- 423 (1045)
T 1k32_A 346 D-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI- 423 (1045)
T ss_dssp S-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-
T ss_pred c-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc-
Confidence 9 999999999888898 9999887665555666789999999999999999999999999999998877776666543
Q ss_pred EEEeeeCCCCCcEEEEEeCCC----------cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 519 TIHSCFGGANQDFVASGSEDG----------KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg----------~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
..+.++|+|++|++++.++ .|++||+.+++ +..+..|...+.+++|+|+ +..|++++.++..++|+
T Consensus 424 --~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spd-G~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 424 --TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDAD-SKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp --CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTT-SCEEEEEESCCCCCEEC
T ss_pred --cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCC-CCEEEEEecccCCcCcc
Confidence 3345689999999887754 89999999887 7778889888999999999 78888999988888887
Q ss_pred CCC
Q psy10566 589 PHL 591 (604)
Q Consensus 589 ~~~ 591 (604)
...
T Consensus 500 ~~~ 502 (1045)
T 1k32_A 500 RVV 502 (1045)
T ss_dssp SSS
T ss_pred hhc
Confidence 653
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=4.9e-20 Score=186.33 Aligned_cols=269 Identities=12% Similarity=0.126 Sum_probs=184.5
Q ss_pred CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEE--EEecCCCCCCeEE
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLR--VKLNHSPEDSLTS 397 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~--~~~~~~~~~~v~~ 397 (604)
.++.|.+|+++..++....+... .+...+..++|+|||+ +++++. .+.+.|++|++.++... ..+. .+...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~-~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLL-AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV-APGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEE-EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE-EESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEEeeee-eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee-cCCCCCEE
Confidence 35679999988555555444333 3456788899999999 666554 22348999999877632 2222 24566889
Q ss_pred EEEecCCCEEEEEe-cCCeEEEEEcC--CCe--eeeeec-----------eeEEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy10566 398 CSWNRDGTKFVCGG-IRGQFYQCDIE--GQV--LDSWEG-----------VRVNCLWCRSDGKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 398 ~~~~~~~~~l~s~~-~dg~i~iwd~~--~~~--~~~~~~-----------~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~ 461 (604)
++|+|+|+++++++ .++.|.+|+++ +.. +..+.. ..+.+++++|+|+.+++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 99999999988888 67999999984 222 222211 137789999999966666668899999998
Q ss_pred -CCccccc----ccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCC--Cce--eeEeeccccc---eEEEEeeeCCCC
Q psy10566 462 -HLTDSNL----LQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRD--RIL--LRKFQGVTQG---QFTIHSCFGGAN 528 (604)
Q Consensus 462 -~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~--~~~--~~~~~~~~~~---~~~i~~~~~~~~ 528 (604)
++..... ......+..++|+|+|++++++ ..++.|.+|++.. ++. +..+...... ......+.++|+
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 3332211 1223467789999999976664 5678999999874 433 2222222211 123455667899
Q ss_pred CcEE-EEEeCCCcEEEEeCCC---CcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEEEE--CCCCCC
Q psy10566 529 QDFV-ASGSEDGKVYIWHVKR---ELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVRIW--GPHLNT 593 (604)
Q Consensus 529 ~~~l-~sgs~dg~I~iwd~~~---~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~iW--~~~~~~ 593 (604)
|++| +++..++.|.+|++.. .+.+..+..+...+.+++|+|+ +.+|++++ .++.|.+| |..+++
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 9977 5556689999999972 3556667777777899999999 66666655 45999999 544444
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=2e-21 Score=216.10 Aligned_cols=275 Identities=9% Similarity=0.064 Sum_probs=196.6
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEee-EEeccCC-----------------CCeeEEEECCCCCeEEEE
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHT-----------------LGVAYLAWSPDSSHLLVV 365 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~l~~h~-----------------~~V~~l~~spd~~~l~s~ 365 (604)
+..+.|+ |..+++++.|+ | +||+. +++.. ..+..|. ..|.+++|+|| ..++.+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~----tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~ 98 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKA----NGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF 98 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECC----CCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence 3446777 66677777787 8 99998 22221 1222222 56999999999 666665
Q ss_pred eCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC------Ceeeeeece-e-----
Q psy10566 366 GPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG------QVLDSWEGV-R----- 433 (604)
Q Consensus 366 ~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~-~----- 433 (604)
. ++ .|++||+.+++...... +...+.+++|+|||+.++++ .++.|++||+.+ +........ .
T Consensus 99 ~-~~--~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g 172 (706)
T 2z3z_A 99 T-QG--GLVGFDMLARKVTYLFD--TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYG 172 (706)
T ss_dssp E-TT--EEEEEETTTTEEEEEEC--CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEES
T ss_pred E-CC--EEEEEECCCCceEEccC--CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcc
Confidence 4 35 89999999987665543 45668889999999999985 789999999964 433322221 2
Q ss_pred ----------EEEEEEcCCCCEEEEEe---------------------------------CCCeEEEEEcCCCcccccc-
Q psy10566 434 ----------VNCLWCRSDGKSVLAAD---------------------------------THHRIRTYNFEHLTDSNLL- 469 (604)
Q Consensus 434 ----------v~~l~~s~~g~~l~~~~---------------------------------~dg~I~i~d~~~~~~~~~~- 469 (604)
+.+++|+|||+.|++++ .+..|++||+.+++.....
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~ 252 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT 252 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc
Confidence 47899999999999987 4467999999887654443
Q ss_pred --cCCCCeeEEEECCCCCEEEEEecCC-----eEEEEecCCCceeeEeeccccc--eEEEEeeeCCC--CCcEEEEEeCC
Q psy10566 470 --QEDHPVMSFTIDATDRLALLNVSTQ-----GVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGA--NQDFVASGSED 538 (604)
Q Consensus 470 --~~~~~i~~~~~s~~~~~l~~~~~dg-----~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~--~~~~l~sgs~d 538 (604)
.+...+.+++|+|+|+.+++++.++ .|++||+.+++....+...... ...+..+.++| +|+++++++.|
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC
Confidence 3456789999999999999988775 8999999998444333321111 11122345678 99999999999
Q ss_pred CcEEEEeCC-CCcceEEeeCCCCCeeE-EEEcCCCCcEEEEEeCCC----cEEEECCCCCC
Q psy10566 539 GKVYIWHVK-RELPIATLSGHTRTVSC-VAWNPVYHQMIASVSDDC----TVRIWGPHLNT 593 (604)
Q Consensus 539 g~I~iwd~~-~~~~~~~l~~h~~~V~~-v~~sp~~~~~l~s~s~Dg----~I~iW~~~~~~ 593 (604)
|.++||++. ++..+..+..|...+.+ ++|+|++..++++++.++ .|..|++.++.
T Consensus 333 g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 333 GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 999999886 67778888888888887 799999444555666665 66677776654
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=5.9e-21 Score=212.92 Aligned_cols=284 Identities=8% Similarity=0.024 Sum_probs=196.1
Q ss_pred cceeecccCCC---cEEEEEEcCCCCeEEEEECC---------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC
Q psy10566 292 ETTQVLNDHCD---EVWFCKFSPDGLKLATGSKD---------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359 (604)
Q Consensus 292 ~~~~~l~~H~~---~V~~v~fspdg~~lasgs~d---------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~ 359 (604)
+....+.+|.. .|.+++|||||++||+++.+ +.|.+||+. ++....+....+|...+.+++|||||
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~--~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 48 TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP--HGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS--SCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC--CCceEeccCCccccccccccEECCCC
Confidence 34456666665 49999999999999999864 788899998 33322333334555668999999999
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCC-----------------CeEEEEEecCCCEEEEEecCC--------
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPED-----------------SLTSCSWNRDGTKFVCGGIRG-------- 414 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~l~s~~~dg-------- 414 (604)
+.|++++. + .|++||+.+++.......+... .+.+++|+|||+.|++++.++
T Consensus 126 ~~la~~~~-~--~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 126 QQLIFIFE-N--NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp TCEEEEET-T--EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CEEEEEEC-C--eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEe
Confidence 99999886 4 6999999998776555422221 237899999999999987653
Q ss_pred --------------------------eEEEEEcCCCe-eeeee--------ceeEEEEEEcCCCCEEEEEeC----CCeE
Q psy10566 415 --------------------------QFYQCDIEGQV-LDSWE--------GVRVNCLWCRSDGKSVLAADT----HHRI 455 (604)
Q Consensus 415 --------------------------~i~iwd~~~~~-~~~~~--------~~~v~~l~~s~~g~~l~~~~~----dg~I 455 (604)
.|++||+.+.. ...+. ...+..++|+|||+.+++... +..|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 203 PTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp CCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred eccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 79999996433 34443 246889999999998877653 3579
Q ss_pred EEEEcCCCccccccc--CCCCe----eEEEECCCCCEEEEE--ecCC------eEEEEe-cCCCce--eeEeeccccceE
Q psy10566 456 RTYNFEHLTDSNLLQ--EDHPV----MSFTIDATDRLALLN--VSTQ------GVHLWD-LRDRIL--LRKFQGVTQGQF 518 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~--~~~~i----~~~~~s~~~~~l~~~--~~dg------~I~lwd-~~~~~~--~~~~~~~~~~~~ 518 (604)
++||+.+++...... +...+ ..++|+|+|+.++.. ..++ .|++|| ..++.. ...+.......
T Consensus 283 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~- 361 (723)
T 1xfd_A 283 TLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV- 361 (723)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE-
T ss_pred EEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE-
Confidence 999998876555432 22333 378999999977754 4566 577777 344431 44444322222
Q ss_pred EEEeeeCCCCCcEEEEEeCC---CcEEEEeCCCCc--ceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 519 TIHSCFGGANQDFVASGSED---GKVYIWHVKREL--PIATLSG---HTRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~d---g~I~iwd~~~~~--~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
.....++|+|+.|+..+.+ +.+++|++.... ....+.. |...+..++|+|++..++++++..+
T Consensus 362 -~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 362 -TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp -EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred -EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 2224567999998766655 789999986432 3444544 6777899999999544444444443
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=3.5e-20 Score=185.93 Aligned_cols=271 Identities=11% Similarity=0.110 Sum_probs=188.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEEC-CCeEEEEEeCCCCceeEe-eEEeccCCCCeeEEEECCCCCeEEEEeCC
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSK-DTTVIIWDVDPVTFTCQH-RKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~-dg~i~iwd~~~~~~~~~~-~~~l~~h~~~V~~l~~spd~~~l~s~~~d 368 (604)
.+....+..+...+ +++|+|+|+++++++. ++.|.+||... ... ...+..+..+..+++|+|++++++++..+
T Consensus 30 ~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 104 (331)
T 3u4y_A 30 LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL----EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGL 104 (331)
T ss_dssp CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS----SSCEEEEEEECSSCCCCEEECTTSSEEEECCCS
T ss_pred cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC----CceeEEecccCCCCccceEECCCCCEEEEecCC
Confidence 34455555666677 9999999997766665 88999999982 222 45556566666669999999999944433
Q ss_pred Cce--EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCe-EEEEEcC--CCeeee----e-eceeEEEE
Q psy10566 369 DCH--ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQ-FYQCDIE--GQVLDS----W-EGVRVNCL 437 (604)
Q Consensus 369 ~~~--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~-i~iwd~~--~~~~~~----~-~~~~v~~l 437 (604)
.+ .|++||+.+++....+.. .....+++|+|+|++++++ ..++. |.+|+++ +..... . .+.....+
T Consensus 105 -~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 181 (331)
T 3u4y_A 105 -NHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNI 181 (331)
T ss_dssp -SSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEE
T ss_pred -CCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccce
Confidence 23 799999999988877653 3457999999999866655 45577 9999985 222211 1 12357899
Q ss_pred EEcCCCCEEEEEe-CCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCce--eeEe
Q psy10566 438 WCRSDGKSVLAAD-THHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRIL--LRKF 510 (604)
Q Consensus 438 ~~s~~g~~l~~~~-~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~--~~~~ 510 (604)
+|+|+|+++++++ .++.|.+||+.+.+. ...+.....+..++|+|+|++++++.. ++.|.+||+.+++. +..+
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 9999999765554 688999999998776 555666677889999999998777654 67899999998876 3333
Q ss_pred ecc----ccceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 511 QGV----TQGQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 511 ~~~----~~~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
... .........+.++|+++++++++. ++.|.+||+.... +..+.+....-....++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~~g~~~~~~~~ 325 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV-VGYVAGIEANGGIAICHPD 325 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE-EEECTTCCCBSCEEECCCC
T ss_pred ccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc-ccceecccccCCeEEECCc
Confidence 322 111111122456799998866555 6799999998644 3344444333233445554
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=1.6e-20 Score=189.48 Aligned_cols=272 Identities=12% Similarity=0.089 Sum_probs=183.0
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEe-CCCceEEEEEECCCceE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVG-PEDCHELWVWNIETELL 383 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~-~d~~~~i~vwd~~~~~~ 383 (604)
.+++++++.++++++.+++|.+||.. +.+....+..+. ..+..++|+|+++++++++ .++ .|++||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~--~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVA----SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG--DIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETT----TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT--EEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECC----CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCC--cEEEEeCCCCcE
Confidence 45788999999999999999999988 344455555433 2578999999998776555 444 899999999988
Q ss_pred EEEecCCC-----CCCeEEEEEecCCCEEEEEecC------------CeEEEEEcCC----Ceeeeeece-eEEEEEEcC
Q psy10566 384 RVKLNHSP-----EDSLTSCSWNRDGTKFVCGGIR------------GQFYQCDIEG----QVLDSWEGV-RVNCLWCRS 441 (604)
Q Consensus 384 ~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~----~~~~~~~~~-~v~~l~~s~ 441 (604)
...+...+ ...+.+++|+|+|+++++++.+ +.|.+||+.. +.+..+... .+.+++++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 77665332 2337889999999999999866 8999999853 222333322 578889999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccccccCCC-------------------------CeeEEEECCCCCEEEEEecCC-e
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-------------------------PVMSFTIDATDRLALLNVSTQ-G 495 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~-------------------------~i~~~~~s~~~~~l~~~~~dg-~ 495 (604)
+|+ +++++. .|.+||..+++....+.... ....+++++++.......... .
T Consensus 158 dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 666543 49999998876544333221 233455555442110000001 1
Q ss_pred EEEEecCCCceee-EeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc
Q psy10566 496 VHLWDLRDRILLR-KFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ 573 (604)
Q Consensus 496 I~lwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~ 573 (604)
+..+|..+++... .+..... ....+.++| ++++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+ +.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~ 307 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTE---LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKK-GD 307 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSS---CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSS-SS
T ss_pred EEEEeccCCcEEecccccCCC---cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCC-CC
Confidence 2224444433211 1111111 123345568 99999888 889999999999988887643 45789999999 66
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|++++.++.|++||+.+++
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CEEEESBSSEEEEEETTTTE
T ss_pred EEEEecCCCeEEEEeccccc
Confidence 66667889999999998765
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=1e-20 Score=194.35 Aligned_cols=293 Identities=14% Similarity=0.046 Sum_probs=199.8
Q ss_pred ccceeecccCCCcEEE-----EEEcCCCCeEEEEEC-CCe--EEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeE
Q psy10566 291 CETTQVLNDHCDEVWF-----CKFSPDGLKLATGSK-DTT--VIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHL 362 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~-----v~fspdg~~lasgs~-dg~--i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l 362 (604)
...+..+..|...+.. .+|||||++|++++. +|. |.+||+. .........++...+..++|+|||+.|
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~----~g~~~~lt~~~~~~~~~~~~spdg~~l 95 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN----TQVATQLTEGRGDNTFGGFLSPDDDAL 95 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT----TCEEEECCCSSCBCSSSCEECTTSSEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC----CCceEEeeeCCCCCccceEEcCCCCEE
Confidence 4456677778777776 899999999999887 674 7777776 344445555666666678899999999
Q ss_pred EEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEE--EecCCCEEEEE----------------------ecCCeEEE
Q psy10566 363 LVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCS--WNRDGTKFVCG----------------------GIRGQFYQ 418 (604)
Q Consensus 363 ~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~i 418 (604)
+.++.++ .|++||+.+++...... .+...+.... ++|+++.++.. ..+..|.+
T Consensus 96 ~~~~~~~--~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 96 FYVKDGR--NLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp EEEETTT--EEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred EEEeCCC--eEEEEECCCCcceeeee-chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 9999887 89999999988665544 2334343333 48899988743 23468999
Q ss_pred EEcCCCeeeeeece--eEEEEEEcC-CCCEEEEEeCC------CeEEEEEcCCCcccccccCC--CCeeEEEECCCCCEE
Q psy10566 419 CDIEGQVLDSWEGV--RVNCLWCRS-DGKSVLAADTH------HRIRTYNFEHLTDSNLLQED--HPVMSFTIDATDRLA 487 (604)
Q Consensus 419 wd~~~~~~~~~~~~--~v~~l~~s~-~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~~~--~~i~~~~~s~~~~~l 487 (604)
||+.+.....+... .+..+.|+| +|+.++....+ ..|.++|........+..+. ..+...+|+|+|+.|
T Consensus 173 ~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 173 VDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred EECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEE
Confidence 99964444444332 588999999 99998887763 37888888776655555444 357788999999977
Q ss_pred EEEec-CC----eEEEEecCCCceee--EeeccccceEEEEeeeCCCCCcEEEEE---------eCCCcEEEEeCCCCcc
Q psy10566 488 LLNVS-TQ----GVHLWDLRDRILLR--KFQGVTQGQFTIHSCFGGANQDFVASG---------SEDGKVYIWHVKRELP 551 (604)
Q Consensus 488 ~~~~~-dg----~I~lwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~sg---------s~dg~I~iwd~~~~~~ 551 (604)
+..+. ++ .|++||+.+++... .+.++...........++|+|+.|+.. ..+..|++||+.+++.
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 65443 22 39999999887433 222211000000012356888877754 4567899999998765
Q ss_pred eEEeeCCCC-----------CeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 552 IATLSGHTR-----------TVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 552 ~~~l~~h~~-----------~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
..+..|.. .+.+++|+|++..+++++..+|...||.++-
T Consensus 333 -~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 333 -HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp -EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred -EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 45555655 5788999999444444555678888886643
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=2.9e-19 Score=181.66 Aligned_cols=272 Identities=14% Similarity=0.148 Sum_probs=186.1
Q ss_pred CCCeEEEEE----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--CceEEEEEECCC--ceE
Q psy10566 312 DGLKLATGS----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--DCHELWVWNIET--ELL 383 (604)
Q Consensus 312 dg~~lasgs----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--~~~~i~vwd~~~--~~~ 383 (604)
...+++.|+ .++.|.+|.++..++........ +...+..++|+||+++|++++.+ +.+.|.+|++.. +..
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 334556664 35689999987555555555555 67778899999999999999886 224798888765 443
Q ss_pred E--EEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcC-CCeeeee------ec----------eeEEEEEEcCCC
Q psy10566 384 R--VKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIE-GQVLDSW------EG----------VRVNCLWCRSDG 443 (604)
Q Consensus 384 ~--~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~------~~----------~~v~~l~~s~~g 443 (604)
. .... .+......+++ +++++++++ .++.|.+|++. ...+... .+ ..+.+++|+|+|
T Consensus 90 ~~~~~~~-~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 90 HLLNTQK-TMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEEE-CSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EEeeEec-cCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 2 2222 23445677777 888777776 57899999984 2221111 11 135789999999
Q ss_pred CEEEEEeC-CCeEEEEEcCCCcc--------------cccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCce-
Q psy10566 444 KSVLAADT-HHRIRTYNFEHLTD--------------SNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRIL- 506 (604)
Q Consensus 444 ~~l~~~~~-dg~I~i~d~~~~~~--------------~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~- 506 (604)
+++++++. ++.|.+|++..... .........+..++|+|+++++++++ .++.|.+||+.++..
T Consensus 167 ~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 167 KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 97766654 78999999875432 11223455678999999999888877 589999999987754
Q ss_pred -eeEeeccccceEEEEeeeCCCCCcEEEEEeCC--CcEEEEeCC--CCc--ceEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 507 -LRKFQGVTQGQFTIHSCFGGANQDFVASGSED--GKVYIWHVK--REL--PIATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 507 -~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d--g~I~iwd~~--~~~--~~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
+..+............+.++|+|++|+++..+ +.|.+|++. +++ .+..+.. ...+.+++|+|+ +.+|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spd-g~~l~~~~ 324 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPN-GKYLLVAC 324 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTT-SCEEEEEE
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCC-CCEEEEEE
Confidence 23333222211123445678999988776654 899999996 454 4445554 567889999999 66666665
Q ss_pred -CCCcEEEECCC
Q psy10566 580 -DDCTVRIWGPH 590 (604)
Q Consensus 580 -~Dg~I~iW~~~ 590 (604)
.++.|.+|+++
T Consensus 325 ~~~~~v~v~~~d 336 (361)
T 3scy_A 325 RDTNVIQIFERD 336 (361)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCCEEEEEEE
Confidence 78999996554
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=1.1e-19 Score=183.70 Aligned_cols=243 Identities=10% Similarity=0.070 Sum_probs=190.5
Q ss_pred CCCeeEEEECCCCCeEEEEeCCC-----ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEE
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPED-----CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCD 420 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~-----~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd 420 (604)
...+..++|+|+++++++++.++ .+.|.+||..+++....+.. ...+..++|+|++++++++ ..++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 34678999999999998888652 35899999999988877763 2447889999999966554 5579999999
Q ss_pred cC-CCeeeeeece-----------eEEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCC
Q psy10566 421 IE-GQVLDSWEGV-----------RVNCLWCRSDGKSVLAAD--THHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDR 485 (604)
Q Consensus 421 ~~-~~~~~~~~~~-----------~v~~l~~s~~g~~l~~~~--~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~ 485 (604)
.. ++.+..+... .+.+++++|+|+.+++++ .++.|.+||..+.+....+. ....+..++++|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 94 6666665542 278899999999888776 47889999999887776666 556688999999999
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeecccc-ceEEEEeeeCCCCCcEEEEEeC-CCcEEEEeCCCCcceEEeeCCCCCee
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQFTIHSCFGGANQDFVASGSE-DGKVYIWHVKRELPIATLSGHTRTVS 563 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~sgs~-dg~I~iwd~~~~~~~~~l~~h~~~V~ 563 (604)
++++++.++.|.+||+.+++.+..+..... ....+..+.++|+++++++++. ++.|++||..+++.+..+..+.. .
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~ 275 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--L 275 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--C
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--c
Confidence 999999999999999999988877764221 1222333455789987776665 59999999999998888875442 6
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 564 CVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+++|+|++..++++...++.|.+||+.+++
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred eEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 799999944466666689999999998765
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=3.9e-20 Score=181.53 Aligned_cols=236 Identities=14% Similarity=0.061 Sum_probs=174.7
Q ss_pred eeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEeCC--Cc
Q psy10566 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGPE--DC 370 (604)
Q Consensus 294 ~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~~d--~~ 370 (604)
...+..|.+.|.+++|+|+|++|++++ ++.|++||+... .........| ...|.+++|+|+++++++++.+ +.
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD---PSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC---CSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC---CCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 345667899999999999999999987 889999999820 3333444455 4678999999999999999843 33
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEE-EEecCCeEEEEEc--CCCeeeeeec--eeEEEEEEcCCCCE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV-CGGIRGQFYQCDI--EGQVLDSWEG--VRVNCLWCRSDGKS 445 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~--~~~~~~~~~~--~~v~~l~~s~~g~~ 445 (604)
..|+.|+..++... .+. ....+..++|+|+++.++ +++.++.+.+|++ .+.....+.. ..+.+++|+|+++.
T Consensus 110 ~~l~~~~~~~~~~~-~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 110 SAIYLLPSTGGTPR-LMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRW 186 (297)
T ss_dssp CEEEEEETTCCCCE-ECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSE
T ss_pred ceEEEEECCCCceE-Eee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCE
Confidence 47778887776643 332 223488999999999887 7788999999986 3444444433 36899999999998
Q ss_pred EEEEe-CCCeEEEEEcC--CCcccccccCCCCeeEEEECCCCCEEEEEecC-----------CeEEEEecCCCceeeE--
Q psy10566 446 VLAAD-THHRIRTYNFE--HLTDSNLLQEDHPVMSFTIDATDRLALLNVST-----------QGVHLWDLRDRILLRK-- 509 (604)
Q Consensus 446 l~~~~-~dg~I~i~d~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~I~lwd~~~~~~~~~-- 509 (604)
+++++ .++.+++|++. ......+..+...+.+++|+|+++++++++.+ +.|++||+.+++....
T Consensus 187 l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 187 IYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp EEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred EEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 88766 48889999875 33333444456778899999999999988876 5699999998765433
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCC
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDG 539 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg 539 (604)
+.++... +..+.++|++++|++++.+.
T Consensus 267 ~~~~~~~---~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFGGQGT---MNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEESTTT---SCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCcc---cccceECCCCCEEEEEEecc
Confidence 3344443 33456689999998887654
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=4.2e-19 Score=179.44 Aligned_cols=248 Identities=12% Similarity=0.148 Sum_probs=171.8
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEEC---CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEE
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSK---DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~---dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~ 374 (604)
..+...+..++|+|||+ |++++. ++.|.+|++. .+....+..+..+...+..++|+|+|++|++++..+ +.|.
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~--~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQID--GQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK-GTAE 111 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEE--TTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT-TEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEec--CCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC-CEEE
Confidence 34567788899999999 555544 6899999997 445555666666778899999999999999888443 3899
Q ss_pred EEECC-Cce--EEEEecCC--------CCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeee--e---eceeEEE
Q psy10566 375 VWNIE-TEL--LRVKLNHS--------PEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS--W---EGVRVNC 436 (604)
Q Consensus 375 vwd~~-~~~--~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~--~---~~~~v~~ 436 (604)
+|++. ++. .+..+... ....+.+++|+|+|+.+++...++.|.+|+++ ++.... + .+..+..
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99995 332 33333211 12248899999999966666678899999996 332211 1 1225778
Q ss_pred EEEcCCCCEEEE-EeCCCeEEEEEcCC--Ccccc--ccc-C------CCCeeEEEECCCCCEEEE-EecCCeEEEEecCC
Q psy10566 437 LWCRSDGKSVLA-ADTHHRIRTYNFEH--LTDSN--LLQ-E------DHPVMSFTIDATDRLALL-NVSTQGVHLWDLRD 503 (604)
Q Consensus 437 l~~s~~g~~l~~-~~~dg~I~i~d~~~--~~~~~--~~~-~------~~~i~~~~~s~~~~~l~~-~~~dg~I~lwd~~~ 503 (604)
++|+|+|+++++ ...++.|.+|++.. +.... ... . ...+..++|+|+|+++++ +..++.|.+||+..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999996666 45678999999874 22111 111 1 145788999999998855 45589999999973
Q ss_pred C---ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-CcEEEE--eCCCCcce
Q psy10566 504 R---ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-GKVYIW--HVKRELPI 552 (604)
Q Consensus 504 ~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-g~I~iw--d~~~~~~~ 552 (604)
. +.+..+..+.... ..+.++|+|++|++++.+ +.|.+| |..++++.
T Consensus 272 ~g~~~~~~~~~~~~~~~---~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFP---RDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GGCEEEEEEEECSSSCC---CEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCcEEEeEEEecCCCCc---CeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 2 3344444333222 234557999988888764 899999 55567654
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=7.9e-19 Score=178.50 Aligned_cols=262 Identities=11% Similarity=0.086 Sum_probs=182.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
|...+..++|+|||++|++++.+ +.|.+|+++..++....+.....+...+..+++ +++++++++..+ +.|.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~-~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG-GSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT-TEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC-CEEEE
Confidence 67788889999999999999876 799999998544555666666656667888888 888888877543 38999
Q ss_pred EECCCceEEEEe----c-C--------CCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCe-------ee------e
Q psy10566 376 WNIETELLRVKL----N-H--------SPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIEGQV-------LD------S 428 (604)
Q Consensus 376 wd~~~~~~~~~~----~-~--------~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~-------~~------~ 428 (604)
|++.....+... . . .+...+.+++|+|+|+++++++ .++.|.+|+++... +. .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 999754322111 1 0 1123358899999999776655 47899999985211 11 1
Q ss_pred --e-eceeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccc------cCCCCeeEEEECCCCCEEEEEecC--CeE
Q psy10566 429 --W-EGVRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLL------QEDHPVMSFTIDATDRLALLNVST--QGV 496 (604)
Q Consensus 429 --~-~~~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~d--g~I 496 (604)
. .+..+..++|+|+|+++++++ .++.|.+||+.++...... .+......++|+|+|++++++..+ +.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1 123578899999999887777 6899999999865432111 123446799999999999777765 889
Q ss_pred EEEecC--CCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEe-CCCcEEEEe--CCCCcceEEee-CCCCCeeEEEEc
Q psy10566 497 HLWDLR--DRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGS-EDGKVYIWH--VKRELPIATLS-GHTRTVSCVAWN 568 (604)
Q Consensus 497 ~lwd~~--~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd--~~~~~~~~~l~-~h~~~V~~v~~s 568 (604)
.+|++. +++ .+..+.. .. ....+.++|+|++|++++ .++.|.+|+ ..+++...... .+...+.|+.|.
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~-g~---~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT-GI---HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC-SS---CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEcCCCCcEEEeeEecC-CC---CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 999996 444 3333332 11 122345679999888887 578999964 45676544432 245678999886
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=6.5e-19 Score=179.46 Aligned_cols=274 Identities=8% Similarity=0.057 Sum_probs=186.5
Q ss_pred eEEEEECC--CeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC-CceEEEEecCC
Q psy10566 315 KLATGSKD--TTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE-TELLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~d--g~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~-~~~~~~~~~~~ 390 (604)
+++.|+.. +.|.+|+++..++....+.... .....+..++|+|++++|++++.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEee
Confidence 35566653 5788888864455544444332 234568899999999999888876 69999997 77654432211
Q ss_pred CCCCeEEEEEecCCCE--EEEEe-------------cCCeEEEEEcC--CCeeeeee------ceeEEEEEEcCCCCEEE
Q psy10566 391 PEDSLTSCSWNRDGTK--FVCGG-------------IRGQFYQCDIE--GQVLDSWE------GVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~--l~s~~-------------~dg~i~iwd~~--~~~~~~~~------~~~v~~l~~s~~g~~l~ 447 (604)
..+.+.+++|+|+|++ +++++ .+|.+.+|+++ ++...... +..+.+++|+|+|++++
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 1123566899999995 44553 68999999994 55443332 34688999999999888
Q ss_pred EEeC-CCeEEEEEcC-CCcccc--ccc---CCCCeeEEEECCCCCEEEEEec-CCeEEEEecC--CCcee---eEeeccc
Q psy10566 448 AADT-HHRIRTYNFE-HLTDSN--LLQ---EDHPVMSFTIDATDRLALLNVS-TQGVHLWDLR--DRILL---RKFQGVT 514 (604)
Q Consensus 448 ~~~~-dg~I~i~d~~-~~~~~~--~~~---~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~--~~~~~---~~~~~~~ 514 (604)
+++. ++.|++||+. +++... ... +...+..++|+|+|+++++++. ++.|.+|++. +++.. ..+....
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 7764 6799999998 554321 121 2456889999999999988775 6899999875 45442 1222111
Q ss_pred c---ceE-------EEEeee-CCCCCcEEEEEeCC-C-----cEEEEeCC-CCcceE---EeeCCCCCeeEEEEcC---C
Q psy10566 515 Q---GQF-------TIHSCF-GGANQDFVASGSED-G-----KVYIWHVK-RELPIA---TLSGHTRTVSCVAWNP---V 570 (604)
Q Consensus 515 ~---~~~-------~i~~~~-~~~~~~~l~sgs~d-g-----~I~iwd~~-~~~~~~---~l~~h~~~V~~v~~sp---~ 570 (604)
. ... ....+. ++|+|++|++++.+ + .|.+|++. +++... ....+...+..++|+| +
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC
Confidence 1 000 233445 78999988877643 2 89999996 566543 2334555678899999 7
Q ss_pred CCcEEEEEeC-CCcEEEECCCCC
Q psy10566 571 YHQMIASVSD-DCTVRIWGPHLN 592 (604)
Q Consensus 571 ~~~~l~s~s~-Dg~I~iW~~~~~ 592 (604)
+.+|++++. ++.|.+|+++..
T Consensus 321 -g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 -DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -TTEEEEECSSSCEEEEEEEETT
T ss_pred -CCEEEEEEcCCCeEEEEEEchh
Confidence 677777775 599999998764
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=5.1e-20 Score=205.25 Aligned_cols=276 Identities=12% Similarity=0.127 Sum_probs=190.8
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC---CeeEEEECCCCCeEEEEeCC-------CceEEEE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPDSSHLLVVGPE-------DCHELWV 375 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~spd~~~l~s~~~d-------~~~~i~v 375 (604)
+++|+|||++++++ .|++|++||+. ..+....+.+|.. .|.+++|||||++|++++.. ..+.|++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIE----TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESS----SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcC----CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 67999999766654 69999999998 3334444554433 48999999999999988761 1248999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ce--eE-----------------
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GV--RV----------------- 434 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~--~v----------------- 434 (604)
||+.+++...... ....+..++|+|||+.|+.+. ++.|++||+.+.....+. ++ .+
T Consensus 95 ~d~~~g~~~~~~~--l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 95 YDLSNGEFVRGNE--LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp EETTTTEECCSSC--CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred EECCCCcccccee--cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9999987621111 124688999999999999885 789999999543222221 11 11
Q ss_pred EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEEcCCCccc---c------cccC
Q psy10566 435 NCLWCRSDGKSVLAADTHH----------------------------------RIRTYNFEHLTDS---N------LLQE 471 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~dg----------------------------------~I~i~d~~~~~~~---~------~~~~ 471 (604)
.+++|+|||+.|++++.|. .|++||+.++... . ...+
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 4899999999999987652 7889999886542 1 1235
Q ss_pred CCCeeEEEECCCCCEEEEEecC----CeEEEEe----cCCCceeeEe----eccccceEE--EEeeeCCCCCcEEEE--E
Q psy10566 472 DHPVMSFTIDATDRLALLNVST----QGVHLWD----LRDRILLRKF----QGVTQGQFT--IHSCFGGANQDFVAS--G 535 (604)
Q Consensus 472 ~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd----~~~~~~~~~~----~~~~~~~~~--i~~~~~~~~~~~l~s--g 535 (604)
...+.+++|+||++.+++.... ..|.+|| +.+++....+ .++...... .....++|+|+.++. +
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 6678999999998777664432 2488999 8777766555 244332210 012456799985544 4
Q ss_pred eCCC--cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC----CCcEEEECCCC
Q psy10566 536 SEDG--KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD----DCTVRIWGPHL 591 (604)
Q Consensus 536 s~dg--~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~----Dg~I~iW~~~~ 591 (604)
..+| .|++||+.+++ ...+..+...|..+.++ +++.+++++.. ++.+++|.+..
T Consensus 332 ~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 4555 57778887766 56666666778888777 64555555544 58899998764
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=4.6e-19 Score=197.49 Aligned_cols=289 Identities=11% Similarity=0.067 Sum_probs=194.1
Q ss_pred cceeecccCCC---cEEEEEEcCCCCeEEEEEC---------CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCC
Q psy10566 292 ETTQVLNDHCD---EVWFCKFSPDGLKLATGSK---------DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359 (604)
Q Consensus 292 ~~~~~l~~H~~---~V~~v~fspdg~~lasgs~---------dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~ 359 (604)
+....+.+|.. .|.+++|||||++||+++. ++.|++||+. ++.......+ ...+..++|||||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~--~g~~~~~~~l---~~~~~~~~~SPDG 121 (719)
T 1z68_A 47 QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS--NGEFVRGNEL---PRPIQYLCWSPVG 121 (719)
T ss_dssp CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT--TTEECCSSCC---CSSBCCEEECSST
T ss_pred cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC--CCccccceec---CcccccceECCCC
Confidence 34445555544 4999999999999999876 7899999998 2222000112 2568899999999
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCe-----------------EEEEEecCCCEEEEEecCC--------
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSL-----------------TSCSWNRDGTKFVCGGIRG-------- 414 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg-------- 414 (604)
+.|+++. ++ .|++||+.++........++...| .+++|+|||+.|++++.|.
T Consensus 122 ~~la~~~-~~--~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~ 198 (719)
T 1z68_A 122 SKLAYVY-QN--NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAY 198 (719)
T ss_dssp TCEEEEE-TT--EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred CEEEEEE-CC--eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEe
Confidence 9999986 44 799999998876554333332222 4899999999999988652
Q ss_pred --------------------------eEEEEEcCCCee----ee-----e--eceeEEEEEEcCCCCEEEEEeCC----C
Q psy10566 415 --------------------------QFYQCDIEGQVL----DS-----W--EGVRVNCLWCRSDGKSVLAADTH----H 453 (604)
Q Consensus 415 --------------------------~i~iwd~~~~~~----~~-----~--~~~~v~~l~~s~~g~~l~~~~~d----g 453 (604)
.|++||+.+... .. + ....+..++|+||++.+++.... .
T Consensus 199 ~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~ 278 (719)
T 1z68_A 199 SYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVS 278 (719)
T ss_dssp EECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEE
T ss_pred eccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeE
Confidence 788999965432 11 1 22368899999998766664432 2
Q ss_pred eEEEEE----cCCCcccccc-----cCCCCee-----EEEECCCCCEEEE--EecCC--eEEEEecCCCceeeEeecccc
Q psy10566 454 RIRTYN----FEHLTDSNLL-----QEDHPVM-----SFTIDATDRLALL--NVSTQ--GVHLWDLRDRILLRKFQGVTQ 515 (604)
Q Consensus 454 ~I~i~d----~~~~~~~~~~-----~~~~~i~-----~~~~s~~~~~l~~--~~~dg--~I~lwd~~~~~~~~~~~~~~~ 515 (604)
.|.+|| ..+++...+. .+...+. .+.|+|+|+.++. +..+| .|++||+.+++ ...+..+..
T Consensus 279 ~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~ 357 (719)
T 1z68_A 279 VLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKW 357 (719)
T ss_dssp EEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSS
T ss_pred EEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCce
Confidence 488899 7776665555 3445555 7899999996655 33444 57888887766 444444333
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCC--Cc-ceEEee----CCCCCeeEEEEcCCCCcEEEEEeCC--
Q psy10566 516 GQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKR--EL-PIATLS----GHTRTVSCVAWNPVYHQMIASVSDD-- 581 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~--~~-~~~~l~----~h~~~V~~v~~sp~~~~~l~s~s~D-- 581 (604)
.+..+ .++ +++.|+..+.+ +.+++|.+.. +. ....+. +|...+..+.|+|++..++++++.+
T Consensus 358 ~v~~~--~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~ 433 (719)
T 1z68_A 358 EAINI--FRV--TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGI 433 (719)
T ss_dssp CEEEE--EEE--CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSS
T ss_pred EEEEE--EEE--eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCC
Confidence 33322 333 55555555544 7888888754 42 133443 2667788999999955556566554
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
..+.+|++.+++
T Consensus 434 p~~~l~d~~~g~ 445 (719)
T 1z68_A 434 PISTLHDGRTDQ 445 (719)
T ss_dssp CEEEEECSSSCC
T ss_pred CeEEEEECCCCC
Confidence 578899987664
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=2.6e-19 Score=179.51 Aligned_cols=242 Identities=15% Similarity=0.110 Sum_probs=179.8
Q ss_pred cEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEecc-C----CCCeeEEEECCCCCeEEEEe----------
Q psy10566 303 EVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEG-H----TLGVAYLAWSPDSSHLLVVG---------- 366 (604)
Q Consensus 303 ~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l~~-h----~~~V~~l~~spd~~~l~s~~---------- 366 (604)
.+.+++|+|+|+++ ++++.++.|.+||+. +.+....+.. + ...+.+++|+|+|+++++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLV----TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETT----TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECC----CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 48889999999865 455567899999987 3333333332 1 23678899999999998885
Q ss_pred --CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeecee-EEEEEEcCC
Q psy10566 367 --PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVR-VNCLWCRSD 442 (604)
Q Consensus 367 --~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-v~~l~~s~~ 442 (604)
.++ .|++||+.+++....+.. ...+.+++|+|++++++++ ++.|.+||+. ++....+.... ...+.++|+
T Consensus 111 ~~~~~--~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d 184 (337)
T 1pby_B 111 EVQPT--RVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184 (337)
T ss_dssp EECCC--EEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred cccCc--eEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence 345 899999999988777653 3457889999999988888 6899999995 44444443221 123367888
Q ss_pred CCEEEEEeCCC------------------------eEEEEEcCCCcccc--cccCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 443 GKSVLAADTHH------------------------RIRTYNFEHLTDSN--LLQEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 443 g~~l~~~~~dg------------------------~I~i~d~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
++.++..+..+ .|.+||..+.+... ...+...+.+++|+|++++++++ ++.|
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v 262 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL 262 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence 88765544332 46899998876531 11234567889999999999988 7999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~ 560 (604)
++||+.+++.+..+..... +..+.++|+|+++++++.++.|++||+.+++.+..+..+.+
T Consensus 263 ~~~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 263 ESFDLEKNASIKRVPLPHS----YYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp EEEETTTTEEEEEEECSSC----CCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred EEEECCCCcCcceecCCCc----eeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 9999999988877764432 22345579999999999999999999999999888876543
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=5.2e-18 Score=176.55 Aligned_cols=201 Identities=12% Similarity=0.031 Sum_probs=147.3
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCC-------C--ce---eEeeEEeccCCCCeeEEEECCCCCeEE----
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPV-------T--FT---CQHRKTLEGHTLGVAYLAWSPDSSHLL---- 363 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~-------~--~~---~~~~~~l~~h~~~V~~l~~spd~~~l~---- 363 (604)
+...+..+++++++.++++++.|+ ++||+.... . .. ......+ .+...|.+++|+|++++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEe
Confidence 344688999999999999999887 899876410 0 00 0011112 3567899999999999999
Q ss_pred EEeCCCceEEEEEECCCc--------eE--EEEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCC-eeeeeec
Q psy10566 364 VVGPEDCHELWVWNIETE--------LL--RVKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQ-VLDSWEG 431 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~--------~~--~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~-~~~~~~~ 431 (604)
+++.|+ .|++||+.++ +. ......+|...|.+++|+|+ +..|++++.||+|++||++.. ......+
T Consensus 113 sgs~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 113 SSEYGS--IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp ETTTEE--EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred ccCCCc--eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 555565 8999998765 11 12333467889999999997 889999999999999999643 3333333
Q ss_pred --eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEe-cCC------e
Q psy10566 432 --VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNV-STQ------G 495 (604)
Q Consensus 432 --~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~-~dg------~ 495 (604)
..+.+++|+|+|+++++++.||.|++||.+......... +...+.+++|++++.++++.+ .+| .
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 379999999999999999999999999998322111111 123789999999888776543 333 3
Q ss_pred EEEEecCCC
Q psy10566 496 VHLWDLRDR 504 (604)
Q Consensus 496 I~lwd~~~~ 504 (604)
+++|++++.
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999865
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=5.1e-19 Score=192.08 Aligned_cols=231 Identities=14% Similarity=0.069 Sum_probs=175.0
Q ss_pred CCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec---CCeEEE--EE
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI---RGQFYQ--CD 420 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~i--wd 420 (604)
..+|.+++|+|||+.|++++. ++ ++.+|++.++.... +...+...+..++|+|| +.+++++. +....+ ++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g--~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEG--SVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETT--EEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCC--ceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 467999999999999999887 76 89999997766544 44344457999999999 77776664 344445 55
Q ss_pred c--CCCeeeeeeceeEEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC----
Q psy10566 421 I--EGQVLDSWEGVRVNCLWCRSDGKS-VLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST---- 493 (604)
Q Consensus 421 ~--~~~~~~~~~~~~v~~l~~s~~g~~-l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---- 493 (604)
. .+..........+...+++|+|+. +++...++.+.+||+.+++...+..+.. .+++|+|||+++++++.+
T Consensus 97 ~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 97 TSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred ccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 5 554442222223446678888764 3444445556699998877665554443 889999999999988877
Q ss_pred CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC--cEEEEeCCCCcceEEeeCCCCCeeEEE-----
Q psy10566 494 QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG--KVYIWHVKRELPIATLSGHTRTVSCVA----- 566 (604)
Q Consensus 494 g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg--~I~iwd~~~~~~~~~l~~h~~~V~~v~----- 566 (604)
+.|++||+.+++.. .+..+.. .+....++|||++|++++.+| .|++||+.+++.. .+.+|...+..++
T Consensus 175 ~~i~~~d~~~g~~~-~l~~~~~---~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR-VFDSGEG---SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp EEEEEEETTTCCCE-EECCSSC---EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred eEEEEEcCCCCCce-EeecCCC---ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 78999999888754 5555554 335566789999999888888 8999999999887 7888888787777
Q ss_pred ---EcCCCCcEEEEEeCCCcEEEECC
Q psy10566 567 ---WNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 567 ---~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
|+|+ +.++++++.||++++|++
T Consensus 250 ~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 250 WLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTT-SCEEEEEEETTEEEEEET
T ss_pred ceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 9999 599999999999999998
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=2e-18 Score=177.47 Aligned_cols=282 Identities=13% Similarity=0.014 Sum_probs=184.5
Q ss_pred ceeecccCCCc-----EEEEEEcCCCCeEEEEECC---CeEEEEEeCCCCceeEeeEEeccCCCC-eeEEEECCCCCeEE
Q psy10566 293 TTQVLNDHCDE-----VWFCKFSPDGLKLATGSKD---TTVIIWDVDPVTFTCQHRKTLEGHTLG-VAYLAWSPDSSHLL 363 (604)
Q Consensus 293 ~~~~l~~H~~~-----V~~v~fspdg~~lasgs~d---g~i~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~spd~~~l~ 363 (604)
.+..+..+... +.+++|||||++|+.++.. ..|.+||+. ++ +. ..+..+... ...+.|+|||++|+
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~--~~--~~-~~l~~~~~~~~~~~~~spdg~~l~ 96 (396)
T 3c5m_A 22 KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLE--TQ--QA-VQLTEGKGDNTFGGFISTDERAFF 96 (396)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT--TT--EE-EECCCSSCBCTTTCEECTTSSEEE
T ss_pred ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECC--CC--cE-EEeecCCCCccccceECCCCCEEE
Confidence 34455544333 7788999999998877543 367888876 22 22 223333333 33478999999999
Q ss_pred EEeCCCceEEEEEECCCceEEEEecCCCCCCeEE-------------------EEEecCCCEEEEE-----ecCCeEEEE
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLNHSPEDSLTS-------------------CSWNRDGTKFVCG-----GIRGQFYQC 419 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~iw 419 (604)
.++.++ .|++||+.+++....... +...... +.|+|+++.++.+ ..+..|++|
T Consensus 97 ~~~~~~--~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 97 YVKNEL--NLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEETTT--EEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEcCC--cEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 999887 799999998876544431 2222222 3467777766654 356689999
Q ss_pred EcCCCeeeeeec--eeEEEEEEcC-CCCEEEEEeCC------CeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEE
Q psy10566 420 DIEGQVLDSWEG--VRVNCLWCRS-DGKSVLAADTH------HRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLAL 488 (604)
Q Consensus 420 d~~~~~~~~~~~--~~v~~l~~s~-~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~ 488 (604)
|+.+........ ..+..+.|+| +++.++..+.+ ..|.+||+.+.....+..+ ...+..++|+|+|+.|+
T Consensus 174 d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 174 DIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp ETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEE
T ss_pred ECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEE
Confidence 996433333222 3588899999 78877766543 3688999876654444442 23577899999999887
Q ss_pred EEecC-----CeEEEEecCCCceeeEeeccccceEEEEeeeCCC-CCcEEEEEe----------------CCCcEEEEeC
Q psy10566 489 LNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGS----------------EDGKVYIWHV 546 (604)
Q Consensus 489 ~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs----------------~dg~I~iwd~ 546 (604)
..+.+ +.|++||+.+++........ . . . ..++| +|+++++++ .++.|++||.
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~-~---~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENEEVMVMP-P-C-S---HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEEEEEECC-S-E-E---EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred EEecCCCCccceEEEEECCCCCeEEeeeCC-C-C-C---CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 77554 44999999888654332211 1 1 1 33457 999888765 3478999999
Q ss_pred CCCcceEEeeCCCC-----------CeeEEEEcCCCCcEEEEEe-CCCcEEEECCC
Q psy10566 547 KRELPIATLSGHTR-----------TVSCVAWNPVYHQMIASVS-DDCTVRIWGPH 590 (604)
Q Consensus 547 ~~~~~~~~l~~h~~-----------~V~~v~~sp~~~~~l~s~s-~Dg~I~iW~~~ 590 (604)
.+++.. .+..+.. .+..++|+|+ +..|+.++ .++...+|.++
T Consensus 328 ~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 328 KAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEE
T ss_pred ccCceE-EccCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEE
Confidence 988753 4544544 2567899999 55555554 46666666543
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=6.8e-18 Score=186.17 Aligned_cols=290 Identities=9% Similarity=0.005 Sum_probs=202.0
Q ss_pred eecccCCCcEEEEEEcCCCCeEEEE--ECCCeEEEEEeCCCCceeEeeEEeccCCCCee---------EEEEC--CCCCe
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKLATG--SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA---------YLAWS--PDSSH 361 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~lasg--s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~---------~l~~s--pd~~~ 361 (604)
..+.+|...|..++|++++-++++. +.++...||.... . .....+..|...+. ...|+ |||+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRA-D---GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECT-T---SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECC-C---CCcceeCCCCccccccccccCCccceeeeecCCCe
Confidence 4577899999999999887777777 5688999999742 1 22455666766666 66665 99999
Q ss_pred -EEEEeCCCceEEEEEECC--C-ceEEEEecCC----CCCCeEEEEEecCCCEEEEEecC----------CeEEEEEcCC
Q psy10566 362 -LLVVGPEDCHELWVWNIE--T-ELLRVKLNHS----PEDSLTSCSWNRDGTKFVCGGIR----------GQFYQCDIEG 423 (604)
Q Consensus 362 -l~s~~~d~~~~i~vwd~~--~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~~~d----------g~i~iwd~~~ 423 (604)
|+.++... ..|++|++. + +... .+... +...+.+++|+|||+.|++++.+ ..|++||+++
T Consensus 93 ~la~~~~~~-~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 93 LLVFTHFGD-QRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEEBTTT-CCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEEEEECCC-CeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 77666532 478888887 3 4433 33321 45678899999999999998877 5899999976
Q ss_pred ------Ceeeeee-c--eeEEEEEEcCCCCEEEEEeCC--------CeEEEEEcC-CC---cccccccC-CCCeeEEEEC
Q psy10566 424 ------QVLDSWE-G--VRVNCLWCRSDGKSVLAADTH--------HRIRTYNFE-HL---TDSNLLQE-DHPVMSFTID 481 (604)
Q Consensus 424 ------~~~~~~~-~--~~v~~l~~s~~g~~l~~~~~d--------g~I~i~d~~-~~---~~~~~~~~-~~~i~~~~~s 481 (604)
.....+. . ..+..++|+|||+.|+.++.+ ..|++||+. ++ ....+... ...+..+.|+
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 4444444 3 357788999999999888755 379999998 45 34444443 5788999999
Q ss_pred CCCCEEEEEecCC--eEEEEecCCCceeeEeeccccceE-----EEEeeeCCCCCcEEEEEeCCCcEEEE--eCCCCcce
Q psy10566 482 ATDRLALLNVSTQ--GVHLWDLRDRILLRKFQGVTQGQF-----TIHSCFGGANQDFVASGSEDGKVYIW--HVKRELPI 552 (604)
Q Consensus 482 ~~~~~l~~~~~dg--~I~lwd~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~sgs~dg~I~iw--d~~~~~~~ 552 (604)
|||++++++..++ .|++||+.+++.......+..... .+..+.++++++++++++. +.++|| |..+++ +
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~ 328 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-L 328 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-E
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-E
Confidence 9999777777777 677777767665443332221100 0122344588999999998 999999 555555 6
Q ss_pred EEeeCCCCCeeEE-EEcCCCCcEEEEEeCCCc--EEEECCCCCC
Q psy10566 553 ATLSGHTRTVSCV-AWNPVYHQMIASVSDDCT--VRIWGPHLNT 593 (604)
Q Consensus 553 ~~l~~h~~~V~~v-~~sp~~~~~l~s~s~Dg~--I~iW~~~~~~ 593 (604)
..+..|...+..+ +++++ ..++++++.+.. |.+|++.+++
T Consensus 329 ~~l~~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 329 VDAAGPWTEWAATLTVSGT-RAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EECCSSCCEEEEEEEEETT-EEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEecCCCCeEEEEEecCCC-EEEEEEcCCCCCCEEEEEECCCCc
Confidence 7888888888877 66544 344555566654 4445555543
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=3.9e-18 Score=177.45 Aligned_cols=209 Identities=11% Similarity=0.104 Sum_probs=156.8
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-----------Ceeeeee-------cee
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG-----------QVLDSWE-------GVR 433 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----------~~~~~~~-------~~~ 433 (604)
.+++|+.... .....+..+++++++.++++++.++ +++|+... ..+.... ...
T Consensus 24 ~vri~~~~~~--------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 24 KVRIFDSPEE--------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp EEECSCCCSS--------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eEEecCCccc--------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 5777764321 1234578999999999999999888 88887521 1111111 125
Q ss_pred EEEEEEcCCCCEEE----EEeCCCeEEEEEcCCC-----cc-------cccccCCCCeeEEEECCC-CCEEEEEecCCeE
Q psy10566 434 VNCLWCRSDGKSVL----AADTHHRIRTYNFEHL-----TD-------SNLLQEDHPVMSFTIDAT-DRLALLNVSTQGV 496 (604)
Q Consensus 434 v~~l~~s~~g~~l~----~~~~dg~I~i~d~~~~-----~~-------~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~I 496 (604)
|.+++|+|+|++++ +++.|+.|++||+.+. .. .....|...|.+++|+|+ +.++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 7788999999998764 11 112236789999999998 7899999999999
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC-------CCeeEEEEcC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT-------RTVSCVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~-------~~V~~v~~sp 569 (604)
++||++++..+....+|... +.++.|+|+|++|++|+.||.|++||.+ ++....+..|. ..|.+++|++
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~---v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVA---VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp EEEEESSSEEEEEEECGGGC---EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred EEEEcCCCcceeeccCCCCc---eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 99999998777666676664 4455668999999999999999999998 66666665442 3799999999
Q ss_pred CCCcEEEE-EeCCCc------EEEECCCCCCC
Q psy10566 570 VYHQMIAS-VSDDCT------VRIWGPHLNTN 594 (604)
Q Consensus 570 ~~~~~l~s-~s~Dg~------I~iW~~~~~~~ 594 (604)
+ ..++++ ++.||. +++|++.....
T Consensus 251 ~-~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~ 281 (434)
T 2oit_A 251 T-YVFAIVYAAADGTLETSPDVVMALLPKKEE 281 (434)
T ss_dssp T-TEEEEEEEETTCCSSSCCEEEEEECCCTTT
T ss_pred C-ceEEEEEccCCCccCCCCceEEEEeccCCC
Confidence 8 555543 445543 89999987643
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=4.6e-18 Score=189.81 Aligned_cols=276 Identities=12% Similarity=0.121 Sum_probs=185.1
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCC-----eeEEEECCCCCeEEEEeCCCc-------
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG-----VAYLAWSPDSSHLLVVGPEDC------- 370 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~-----V~~l~~spd~~~l~s~~~d~~------- 370 (604)
...+++|+|||++++++ |++|++||+. +......+.+|... ...++|||||++|+.++.+..
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAE----YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETT----TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECC----CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 45578999999999986 9999999998 33344556666532 234889999999999887531
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ce--eE------------
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GV--RV------------ 434 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~--~v------------ 434 (604)
+.+++||+.+++... +. .+...+...+|+|||+.|+.+ .++.|++|++.+.....+. +. .+
T Consensus 92 ~~~~~~d~~~~~~~~-l~-~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EE-RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEETTTTEECC-SS-CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred eEEEEEECCCCcEEE-cc-cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 367899999998653 32 455679999999999999888 4789999999543333221 21 11
Q ss_pred -----EEEEEcCCCCEEEEEeCCC------------------------------------eEEEEEcCC---C---cccc
Q psy10566 435 -----NCLWCRSDGKSVLAADTHH------------------------------------RIRTYNFEH---L---TDSN 467 (604)
Q Consensus 435 -----~~l~~s~~g~~l~~~~~dg------------------------------------~I~i~d~~~---~---~~~~ 467 (604)
..++|||||+.|+.++.|. .|++||+.+ + ....
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 2489999999998875321 588899988 6 3222
Q ss_pred ccc------CCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCc----ee--eEe--eccccceEE--EEeeeCCC
Q psy10566 468 LLQ------EDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRI----LL--RKF--QGVTQGQFT--IHSCFGGA 527 (604)
Q Consensus 468 ~~~------~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~----~~--~~~--~~~~~~~~~--i~~~~~~~ 527 (604)
+.. +...+..++|+|||+.++..... ..|++||+.+++ +. ..+ .++...+.. .....++|
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 222 55668899999999977665442 369999999887 22 222 233322110 11244579
Q ss_pred CCcEEE-EEeC-C--CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC----CCcEEEECC
Q psy10566 528 NQDFVA-SGSE-D--GKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD----DCTVRIWGP 589 (604)
Q Consensus 528 ~~~~l~-sgs~-d--g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~----Dg~I~iW~~ 589 (604)
||+.++ ..++ + ..|++||..+++.. .+......|..+.+ ++++.++++++. .+...||.+
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 999877 6664 3 46888998876654 44444555666542 333566666655 244555544
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=1.1e-16 Score=162.30 Aligned_cols=265 Identities=11% Similarity=0.082 Sum_probs=190.1
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAW 355 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~ 355 (604)
+.+..+..+..+ .++|+|||+++++++ .+++|.+||.. +.+....+.. +......++|
T Consensus 42 ~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~----t~~~~~~i~~~~~~~~~g~~p~~i~~ 115 (361)
T 2oiz_A 42 KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD----KLTFEKEISLPPKRVQGLNYDGLFRQ 115 (361)
T ss_dssp CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT----TCCEEEEEEECTTBCCBCCCGGGEEE
T ss_pred eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc----CCcEEEEEEcCccccccCCCcceEEE
Confidence 445566666655 899999999998886 36789999987 3444444432 2345778999
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCceEEEE-ecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC--CCeeeeee-
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE--GQVLDSWE- 430 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~--~~~~~~~~- 430 (604)
+|||++|+++......+|.+||+.+++.+.. +... ....+.+.|++ ..+++.+.||.+.+|+.+ ++......
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~---~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~ 192 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA---GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS 192 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT---TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC---CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc
Confidence 9999999998754224899999999988877 5522 23346677865 678888999999999883 44442111
Q ss_pred -----ce-eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-----c-----C---CCCeeEEEECCCCCEEEEEe
Q psy10566 431 -----GV-RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-----Q-----E---DHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 431 -----~~-~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-----~-----~---~~~i~~~~~s~~~~~l~~~~ 491 (604)
.. ....+.+++++..++..+.++.+.++|+......... . . ......++++|+++.++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~ 272 (361)
T 2oiz_A 193 KQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFM 272 (361)
T ss_dssp CCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEE
T ss_pred cceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEE
Confidence 10 1112234567777888888999999998754321100 0 0 11122378999998888875
Q ss_pred c-----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC--cceEEeeCC
Q psy10566 492 S-----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE--LPIATLSGH 558 (604)
Q Consensus 492 ~-----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~--~~~~~l~~h 558 (604)
. .+.|.+||+.+++.+.++..+. . ..+.++|+|+++++++. +.|.+||..++ +.+.++..+
T Consensus 273 ~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p---~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~ 346 (361)
T 2oiz_A 273 HPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--A---LSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA 346 (361)
T ss_dssp ESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--C---CEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS
T ss_pred ccCCCcccccCCCceEEEEECCCCcEEEEEecCC--e---eEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC
Confidence 4 3489999999999999988765 2 23455799999998887 99999999999 999998777
Q ss_pred CCCeeEEEEcCCC
Q psy10566 559 TRTVSCVAWNPVY 571 (604)
Q Consensus 559 ~~~V~~v~~sp~~ 571 (604)
......++++|++
T Consensus 347 G~~P~~~~~~p~G 359 (361)
T 2oiz_A 347 AEASLQVQFHPVG 359 (361)
T ss_dssp CSSEEEEEECCCS
T ss_pred CCCcEEEEecCCC
Confidence 7888999999984
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=8.4e-16 Score=150.57 Aligned_cols=243 Identities=11% Similarity=0.143 Sum_probs=179.5
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec------cCCCCeeEEEE-CCCCCeEEEEeC-CC
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE------GHTLGVAYLAW-SPDSSHLLVVGP-ED 369 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~------~h~~~V~~l~~-spd~~~l~s~~~-d~ 369 (604)
.+|-..+.+++++++|.++++.+.++.|.+||.+ . .....+. ++...+..+++ .+++..+++... ++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~--g---~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE--G---RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT--S---CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC--C---cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 4566789999999999988888889999999976 1 1223332 34467899999 567766665533 55
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec----eeEEEEEEcCCCCE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG----VRVNCLWCRSDGKS 445 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~v~~l~~s~~g~~ 445 (604)
.|.+|| .+++....+...+...+.+++++++|+.+++...++.|.+||.+++.+..+.. ..+..++++++|+.
T Consensus 101 --~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 101 --QIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp --EEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred --EEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 799999 56666666654455678999999999988887888999999998887777642 25889999999998
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCC-eEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQ-GVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg-~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
+++...++.|++||............ ...+..++++++|+++++...++ .|.+||. +++.+..+..+..... ...
T Consensus 178 ~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~~ 255 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQ-CFD 255 (286)
T ss_dssp EEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSC-EEE
T ss_pred EEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCc-cee
Confidence 87778899999999855432222222 25688999999998888887776 9999995 5666666665433221 223
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.++++|+++++ +.|++|++|+.....+
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 445689987777 5799999999876443
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=2e-16 Score=158.56 Aligned_cols=240 Identities=10% Similarity=0.038 Sum_probs=182.1
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCc----------------------eEEEEEECCCceEEEEecCCCCCCeEEEEEecCC
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDC----------------------HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG 404 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~----------------------~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 404 (604)
-..+.+++++|+|+.+++...+.. +.|.+||..+++....+...+-..+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 357899999999998888776621 2699999999988777665555678999999999
Q ss_pred CEEEEEecCCeEEEEEcCCC--eeeeee---------c--eeEEEEEEcC-CCCEEEEEe-CCCeEEEEEcCCCcccccc
Q psy10566 405 TKFVCGGIRGQFYQCDIEGQ--VLDSWE---------G--VRVNCLWCRS-DGKSVLAAD-THHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 405 ~~l~s~~~dg~i~iwd~~~~--~~~~~~---------~--~~v~~l~~s~-~g~~l~~~~-~dg~I~i~d~~~~~~~~~~ 469 (604)
+.+++...++.|+.||.++. .+..+. + .....++++| ++..+++.+ .++.|++||... .....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-KFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-CEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-CEEEEe
Confidence 98888888999999999876 455442 1 1588999999 788777776 689999999543 333322
Q ss_pred c-C----------CCCeeEEEECCC-CCEEEEEecCCeEEEEecCCCceeeEeecc--ccceEEEEeeeCCCCCcEEEE-
Q psy10566 470 Q-E----------DHPVMSFTIDAT-DRLALLNVSTQGVHLWDLRDRILLRKFQGV--TQGQFTIHSCFGGANQDFVAS- 534 (604)
Q Consensus 470 ~-~----------~~~i~~~~~s~~-~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~s- 534 (604)
. . -.....++++|+ +.++++...++.|++||..+++.+..+... ...... +.++| +..+++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~---~~~~p-g~~~~~~ 257 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFA---ISYIP-GFLFAVN 257 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEE---EEEET-TEEEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcce---eeecC-CEEEEeC
Confidence 2 1 123789999998 677777777899999999988888887533 222232 33345 333333
Q ss_pred ------EeCCCcEEEEeCCCCcceEEee---CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 535 ------GSEDGKVYIWHVKRELPIATLS---GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 535 ------gs~dg~I~iwd~~~~~~~~~l~---~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+.++.|++||..+++.+..+. ++...+.+++++|+ +.++++...++.|++|++...
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED-GTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT-SEEEEEESSSCCEEEEEEEEC
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC-CCEEEEECCCCEEEEEeCCcc
Confidence 3345689999999999998873 67778999999999 689999999999999998754
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.76 E-value=1.1e-16 Score=162.50 Aligned_cols=262 Identities=8% Similarity=0.058 Sum_probs=179.7
Q ss_pred CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC--------CCceEEEEEECCCceEEEEecCC--
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP--------EDCHELWVWNIETELLRVKLNHS-- 390 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~--------d~~~~i~vwd~~~~~~~~~~~~~-- 390 (604)
.|+.|.+||.. +.+....+..+..+ .++|+||+++++++.. +....|.+||..+++....+...
T Consensus 29 ~d~~v~v~D~~----t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYT----NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETT----TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred ccCeEEEEECC----CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 47899999987 44455666666555 8999999999998863 11237999999998887766522
Q ss_pred ---CCCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeee-eeceeEEEEEEcCCC-CEEEEEeCCCeEEEEEcCC
Q psy10566 391 ---PEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDS-WEGVRVNCLWCRSDG-KSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 391 ---~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~-~~~~~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~ 462 (604)
+......++|+|+|++++++.. ++.|.+||+. ++.+.. +.......+.+.|++ ..+++.+.||.+.+|+...
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 1235678999999999999875 5799999995 444444 332222335567765 6778888999999998865
Q ss_pred -Cccc------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce--eeEeeccc-----cc--eEEEEeeeCC
Q psy10566 463 -LTDS------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL--LRKFQGVT-----QG--QFTIHSCFGG 526 (604)
Q Consensus 463 -~~~~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~--~~~~~~~~-----~~--~~~i~~~~~~ 526 (604)
++.. ..+........+.+++++..++..+.++.|.++|+..... ...+.... .. ......+.++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred CCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 3222 1111111122333456777888888899999999875532 12221100 00 0000012345
Q ss_pred CCCcEEEEEeC-----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 527 ANQDFVASGSE-----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 527 ~~~~~l~sgs~-----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
++++.++++.. .+.|.+||..+++.+.++..+. +.+++|+|+ +++|++++. ++|.+||..++
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spd-g~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQ-RNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETT-TTEEEEECS-SCEEEEECSSS
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCC-CCEEEEeCC-CeEEEEECCCC
Confidence 88777766543 3489999999999999999887 999999999 678887776 99999999987
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=2.3e-16 Score=158.85 Aligned_cols=242 Identities=12% Similarity=0.036 Sum_probs=167.3
Q ss_pred cceeecccCC-CcEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccC------CCCeeEEEECCCCCeEE
Q psy10566 292 ETTQVLNDHC-DEVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGH------TLGVAYLAWSPDSSHLL 363 (604)
Q Consensus 292 ~~~~~l~~H~-~~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h------~~~V~~l~~spd~~~l~ 363 (604)
+....+..+. ..+..++|+|+|++++ +++.++.|.+||+. +.+....+..+ ...+.+++|+|+|++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~----t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 107 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD----TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVY 107 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT----TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC----CCcEEEEEEcccccccccccccceEECCCCCEEE
Confidence 3444554433 2578899999998654 55578999999987 33344444322 23478999999999999
Q ss_pred EEeCC------------CceEEEEEECCCceE---EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeee
Q psy10566 364 VVGPE------------DCHELWVWNIETELL---RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLD 427 (604)
Q Consensus 364 s~~~d------------~~~~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~ 427 (604)
+++.+ + .|.+||+.+++. ..... +...+.+++|+|+|+ +++++. .|.+||.. ++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 108 ATVNPTQRLNDHYVVKPP--RLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTV 180 (349)
T ss_dssp EEEEEEEECSSCEEECCC--EEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEE
T ss_pred EEcccccccccccccCCC--eEEEEECCCccccceeeecc--CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceec
Confidence 98865 4 899999988542 22232 234588999999999 555543 49999994 55555
Q ss_pred eeece--------------------------eEEEEEEcCCCC-----------EEEEEeCCCeEEEEEcCCCccccccc
Q psy10566 428 SWEGV--------------------------RVNCLWCRSDGK-----------SVLAADTHHRIRTYNFEHLTDSNLLQ 470 (604)
Q Consensus 428 ~~~~~--------------------------~v~~l~~s~~g~-----------~l~~~~~dg~I~i~d~~~~~~~~~~~ 470 (604)
.+... ....+++++++. ++......+.+.+|++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 252 (349)
T 1jmx_B 181 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD-------- 252 (349)
T ss_dssp EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE--------
T ss_pred cccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc--------
Confidence 44321 344566665542 112333345555555522
Q ss_pred CCCCeeEEEECC-CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 471 EDHPVMSFTIDA-TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 471 ~~~~i~~~~~s~-~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
....+..++++| ++++++++ ++.|.+||+.+++.+..+..... +..+.+++++++|++++.++.|++||..++
T Consensus 253 ~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 253 LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT----YYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC----CCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC----ccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 345688999999 99999988 88999999999988877764332 123455799998888888999999999999
Q ss_pred cceEEeeCC
Q psy10566 550 LPIATLSGH 558 (604)
Q Consensus 550 ~~~~~l~~h 558 (604)
+.+..+..+
T Consensus 327 ~~~~~~~~~ 335 (349)
T 1jmx_B 327 EKVKNIKLP 335 (349)
T ss_dssp EEEEEEECS
T ss_pred ceeeeeecC
Confidence 988888755
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=1.7e-16 Score=161.48 Aligned_cols=242 Identities=12% Similarity=0.108 Sum_probs=163.9
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCe--EEEEe-----------
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSH--LLVVG----------- 366 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~--l~s~~----------- 366 (604)
+...+..++|+|||++|++++.+ .|.+|++.. ++..........+ +.+.+++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~-~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKS-PTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEE-TTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECC-CCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 34468889999999999999888 999999861 1222222222212 23567899999995 44442
Q ss_pred --CCCceEEEEEECC-CceEEEEec---CCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcC--CCee--eeee----c
Q psy10566 367 --PEDCHELWVWNIE-TELLRVKLN---HSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIE--GQVL--DSWE----G 431 (604)
Q Consensus 367 --~d~~~~i~vwd~~-~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~--~~~~--~~~~----~ 431 (604)
.++ .+.+|++. +++....+. ..+...+.+++|+|+|+++++++. ++.|.+|+++ ++.. ..+. +
T Consensus 115 ~~~~g--~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 115 YKFAG--YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp SSSCC--EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred ecCCc--eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 355 89999997 455433322 124467899999999998887764 6799999996 4432 2232 3
Q ss_pred eeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCC--Cccc------ccccCC----C-------CeeEEE-ECCCCCEEEEE
Q psy10566 432 VRVNCLWCRSDGKSVLAADT-HHRIRTYNFEH--LTDS------NLLQED----H-------PVMSFT-IDATDRLALLN 490 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~--~~~~------~~~~~~----~-------~i~~~~-~s~~~~~l~~~ 490 (604)
..+..++|+|+|+++++++. ++.|.+|++.. ++.. ..+... . .+..++ |+|+|++++++
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 46889999999999888775 68999998753 3321 111111 1 478899 99999998877
Q ss_pred ecCC------eEEEEecC-CCceeeE---eeccccceEEEEeeeCCC---CCcEEEEEeCC-CcEEEEeCCCC
Q psy10566 491 VSTQ------GVHLWDLR-DRILLRK---FQGVTQGQFTIHSCFGGA---NQDFVASGSED-GKVYIWHVKRE 549 (604)
Q Consensus 491 ~~dg------~I~lwd~~-~~~~~~~---~~~~~~~~~~i~~~~~~~---~~~~l~sgs~d-g~I~iwd~~~~ 549 (604)
..+. .|.+|++. +++.... ...+... ...+.++| +|++|++++.+ +.|.+|++...
T Consensus 273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~---~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG---GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC---TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC---cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 6533 89999996 5654331 2222111 12234457 79999998864 89999998765
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=3e-16 Score=158.28 Aligned_cols=259 Identities=14% Similarity=0.201 Sum_probs=175.2
Q ss_pred CcEEEEEEcCCCCeEEEEE---------CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC---C
Q psy10566 302 DEVWFCKFSPDGLKLATGS---------KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE---D 369 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs---------~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d---~ 369 (604)
..+...++ ||+++|... .++.|.+|++. ++.. ..+ ..+..++|||||++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~---~~l----~~~~~~~~SpDg~~la~~~~~~~~~ 83 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLK--NNAR---RFI----ENATMPRISPDGKKIAFMRANEEKK 83 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETT--TCCE---EEE----ESCEEEEECTTSSEEEEEEEETTTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCC--CCce---EEc----ccCCCeEECCCCCEEEEEEeccCCC
Confidence 45677778 888887642 25678999987 2222 222 468899999999999987754 3
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC---------------------------CeEEEEEcC
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---------------------------GQFYQCDIE 422 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~iwd~~ 422 (604)
...|++||+.+++....... .. +..++|+|||+.|+.++.+ ..|++||+.
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred cceEEEEECCCCceEEEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 34699999998876555442 23 8999999999999888743 578899996
Q ss_pred CCee-eeeeceeEEEEEEcCCCCEEEEEeCCC-------eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC-
Q psy10566 423 GQVL-DSWEGVRVNCLWCRSDGKSVLAADTHH-------RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST- 493 (604)
Q Consensus 423 ~~~~-~~~~~~~v~~l~~s~~g~~l~~~~~dg-------~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 493 (604)
+... ..+....+..+.|+|+| .++++..++ ...+|.+.+++...+..+ ..+..+ +|+|+.++.++.+
T Consensus 161 ~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 161 SEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp TTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred CCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 5433 43332267788999999 777775542 334443334443333333 444443 9999998887754
Q ss_pred -------CeEEEEecCCCceeeEeeccccceEEEEe-eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEE
Q psy10566 494 -------QGVHLWDLRDRILLRKFQGVTQGQFTIHS-CFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCV 565 (604)
Q Consensus 494 -------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v 565 (604)
..|++|| +++.......+.. .+.. ..++ ++ ++++++.++.++|| +.+++. ..+..+.+.|.++
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l~~~~~~---~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~ 307 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGILDEVDR---GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGF 307 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEESSTTCCS---EEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEE
T ss_pred cCCccccceEEEEC--CCceEeccccCCc---ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEee
Confidence 3688888 5554433333333 2332 4556 77 89999999999999 876665 4444567889999
Q ss_pred EEcCCCCcEEEEEeCCCcE-EEECCC
Q psy10566 566 AWNPVYHQMIASVSDDCTV-RIWGPH 590 (604)
Q Consensus 566 ~~sp~~~~~l~s~s~Dg~I-~iW~~~ 590 (604)
+|+| .++++++.++.. .+|.++
T Consensus 308 ~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 308 DVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EESS---SEEEEEECSSSCCEEEEES
T ss_pred eeeC---cEEEEEcCCCChHHheEeC
Confidence 9998 467777776654 677665
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=6.2e-16 Score=155.10 Aligned_cols=267 Identities=14% Similarity=0.164 Sum_probs=187.3
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
..|.+++|++++..++..+.++.++.|.- .....+..+...+.+++|+|+++.++++..++ .|++||..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~--~i~~~d~~~~ 76 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA-------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEG--NIFKINPETK 76 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC-------EEEEEEESSCCCEEEEEECTTSCEEEEETTTC--EEEEECTTTC
T ss_pred cccceeeecCCccceeEEeecccCccccc-------ceeEEEeccCccccCcEECCCCCEEEEECCCC--EEEEEeCCCC
Confidence 34777889999888877788889999932 23455666777789999999999777777666 8999999988
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCeee-ee----eceeEEEEEEcCCCCEEEEEeC-
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR----GQFYQCDIEGQVLD-SW----EGVRVNCLWCRSDGKSVLAADT- 451 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~-~~----~~~~v~~l~~s~~g~~l~~~~~- 451 (604)
+...... .+...+.+++|+|+|+.+++...+ +.|.+||.++.... .. ....+.+++++|+|+.+++...
T Consensus 77 ~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 77 EIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred cEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 7655432 245679999999999988877766 68999999765443 22 1236889999999987776653
Q ss_pred -----CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCC-CceeeEee-----ccccceEE
Q psy10566 452 -----HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRD-RILLRKFQ-----GVTQGQFT 519 (604)
Q Consensus 452 -----dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~-~~~~~~~~-----~~~~~~~~ 519 (604)
.+.|..+|..+.+..........+..++++|+++.++++ ..++.|.+||+.+ +.....+. ..... ..
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~ 234 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EG 234 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SE
T ss_pred cccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CC
Confidence 356777776554443333334457889999999866554 4578999999964 33332211 00110 12
Q ss_pred EEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC------CeeEEEEcCCCCcEEEEEeC
Q psy10566 520 IHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR------TVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~------~V~~v~~sp~~~~~l~s~s~ 580 (604)
...+.++++|+++++...++.|.+||. +++.+..+..+.. .+.+++|+|+++.+++++..
T Consensus 235 ~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 333555688998888888899999998 4677777765433 68999999984344444443
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=3.2e-15 Score=146.35 Aligned_cols=240 Identities=10% Similarity=0.075 Sum_probs=175.9
Q ss_pred cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecC-----CCCCCeEEEEEe-cCCCEEEEEec-CCeEE
Q psy10566 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH-----SPEDSLTSCSWN-RDGTKFVCGGI-RGQFY 417 (604)
Q Consensus 345 ~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~~~l~s~~~-dg~i~ 417 (604)
++-..+.+++++|++..+++...++ .|.+||.. +.....+.. .+...+..+++. +++..+++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~--~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNH--RIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGT--EEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCC--EEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 4556789999999998877777776 89999987 555554432 233468899995 66666666543 88999
Q ss_pred EEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEec
Q psy10566 418 QCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 418 iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~ 492 (604)
+||.+++.+..+.. ..+..++++++|+.+++...++.|.+||.......... .....+..++++++++.+++...
T Consensus 104 ~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred EECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 99988888776643 36889999999998887778899999996543222221 23356889999999998777778
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC-cEEEEeCCCCcceEEeeCCC--CCeeEEEEcC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG-KVYIWHVKRELPIATLSGHT--RTVSCVAWNP 569 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg-~I~iwd~~~~~~~~~l~~h~--~~V~~v~~sp 569 (604)
++.|++||. +++.+..+...... .....+.++++|+++++...++ .|.+||. +++.+..+..+. ..+.+++++|
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~-~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGIT-NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTS-CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCEEEEEcC-CCCEEEEEccCCcc-CCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence 999999997 45555555433211 1223345568999888888776 9999995 567777776553 3478999999
Q ss_pred CCCcEEEEEeCCCcEEEECCCCC
Q psy10566 570 VYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 570 ~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
+ +.++++ +.|++|++|++...
T Consensus 261 ~-g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 261 D-GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp T-TEEEEE-ETTTEEEEEECSCC
T ss_pred C-CcEEEE-CCCCeEEEEEcccc
Confidence 8 677777 57999999998654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=9.1e-16 Score=153.69 Aligned_cols=241 Identities=11% Similarity=0.088 Sum_probs=176.0
Q ss_pred CCcEEEEEEcCCCCeEEEEECC------------------------CeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKD------------------------TTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAW 355 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~d------------------------g~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~ 355 (604)
-+.|.+++++|+|+++++.+.+ ++|.+||.. +.+....+. ++-..+..+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN----NAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT----TCCEEEEECTTTCSSEEEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC----CCeEEeccCCCccCCceEEEE
Confidence 3679999999999999888777 479999986 233333333 44567899999
Q ss_pred CCCCCeEEEEeCCCceEEEEEECCCce-EEEEec--------CCCCCCeEEEEEec-CCCEEEEEe-cCCeEEEEEcCCC
Q psy10566 356 SPDSSHLLVVGPEDCHELWVWNIETEL-LRVKLN--------HSPEDSLTSCSWNR-DGTKFVCGG-IRGQFYQCDIEGQ 424 (604)
Q Consensus 356 spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~ 424 (604)
+|+|+.+++...++ .|++||..... .+..+. ..+-.....++++| ++..+++.+ .++.|++|+.++.
T Consensus 99 d~~g~l~v~d~~~~--~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 99 DTDGNYWVTDVALH--QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp CTTSCEEEEETTTT--EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred CCCCCEEEEECCCC--EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 99999777776666 89999986552 333332 12334688999999 788888876 6899999999888
Q ss_pred eeeeeece------------eEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc---CCCCeeEEEECCCCCEEE
Q psy10566 425 VLDSWEGV------------RVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ---EDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 425 ~~~~~~~~------------~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~ 488 (604)
.+..+... ....++++|+ +..+++...++.|++||..+++....+. ....+..++++| +..+.
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE
Confidence 88776421 3889999998 6777777788999999998665544432 355788899999 33333
Q ss_pred EE-------ecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 489 LN-------VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 489 ~~-------~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+. ..+..|++||..+++.+..+............+.++++|.++++...++.|++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 32 3345899999999998888742211111233345579998888988999999999763
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=1.5e-15 Score=169.36 Aligned_cols=288 Identities=12% Similarity=0.086 Sum_probs=185.3
Q ss_pred cceeecccCCCc-----EEEEEEcCCCCeEEEEECC---------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC
Q psy10566 292 ETTQVLNDHCDE-----VWFCKFSPDGLKLATGSKD---------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP 357 (604)
Q Consensus 292 ~~~~~l~~H~~~-----V~~v~fspdg~~lasgs~d---------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp 357 (604)
++...+.+|... ...++|||||++|+.++.+ +.+.+||+. ++ + ...+..|...+...+|||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~--~~--~-~~~l~~~~~~~~~~~~SP 121 (740)
T 4a5s_A 47 NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN--KR--Q-LITEERIPNNTQWVTWSP 121 (740)
T ss_dssp CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT--TT--E-ECCSSCCCTTEEEEEECS
T ss_pred ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC--CC--c-EEEcccCCCcceeeEECC
Confidence 344556666643 2447889999999998876 566799998 22 2 234667788899999999
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCe-----------------EEEEEecCCCEEEEEecCC------
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSL-----------------TSCSWNRDGTKFVCGGIRG------ 414 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~dg------ 414 (604)
||+.|+.+.. + .|++|++.++........++...+ ..+.|+|||+.|+.++.|.
T Consensus 122 dG~~la~~~~-~--~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 122 VGHKLAYVWN-N--DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp STTCEEEEET-T--EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred CCCEEEEEEC-C--eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceE
Confidence 9999998864 4 699999998876554332332222 3589999999999875331
Q ss_pred ------------------------------eEEEEEcCC---C---eeeee--------eceeEEEEEEcCCCCEEEEEe
Q psy10566 415 ------------------------------QFYQCDIEG---Q---VLDSW--------EGVRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 415 ------------------------------~i~iwd~~~---~---~~~~~--------~~~~v~~l~~s~~g~~l~~~~ 450 (604)
.|++||+++ . ....+ ....+..++|+|||+.++...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 199 EYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWL 278 (740)
T ss_dssp EEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEe
Confidence 578889865 3 33333 223588999999999766654
Q ss_pred C----CCeEEEEEcCCCc----cc---cc--ccCCCCe-----eEEEECCCCCEEE-EEec-CC--eEEEEecCCCceee
Q psy10566 451 T----HHRIRTYNFEHLT----DS---NL--LQEDHPV-----MSFTIDATDRLAL-LNVS-TQ--GVHLWDLRDRILLR 508 (604)
Q Consensus 451 ~----dg~I~i~d~~~~~----~~---~~--~~~~~~i-----~~~~~s~~~~~l~-~~~~-dg--~I~lwd~~~~~~~~ 508 (604)
. +..|.+||+.+++ +. .. ..+...+ ....|+|||+.++ ..+. +| .|++||+.++....
T Consensus 279 ~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 279 RRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp ESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 3 2379999998876 22 11 1233333 3788999999877 5553 33 58899988766544
Q ss_pred EeeccccceEEEEeeeCCCCCcEE-EEEeC----CC--cEEEEeCCCCcceEEeeC----CCCCeeEEEEcCCCCcEEEE
Q psy10566 509 KFQGVTQGQFTIHSCFGGANQDFV-ASGSE----DG--KVYIWHVKRELPIATLSG----HTRTVSCVAWNPVYHQMIAS 577 (604)
Q Consensus 509 ~~~~~~~~~~~i~~~~~~~~~~~l-~sgs~----dg--~I~iwd~~~~~~~~~l~~----h~~~V~~v~~sp~~~~~l~s 577 (604)
...+ ...+..+ .. ++++.| ++++. .+ .|+..++..+.....+.. ....+..+.|+|++..++++
T Consensus 359 lT~g-~~~v~~~--~~--~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~ 433 (740)
T 4a5s_A 359 ITKG-TWEVIGI--EA--LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (740)
T ss_dssp SCCS-SSCEEEE--EE--ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred cccC-CEEEEEE--EE--EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence 3333 3223232 22 234444 44444 23 455555555443334442 24578899999995445555
Q ss_pred EeCC--CcEEEECCCCC
Q psy10566 578 VSDD--CTVRIWGPHLN 592 (604)
Q Consensus 578 ~s~D--g~I~iW~~~~~ 592 (604)
.+.. ..+.+++..++
T Consensus 434 ~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 434 CSGPGLPLYTLHSSVND 450 (740)
T ss_dssp ECSBSSCEEEEEETTTT
T ss_pred eCCCCCCEEEEEECCCC
Confidence 5443 35777777654
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=1.1e-15 Score=156.64 Aligned_cols=255 Identities=12% Similarity=0.065 Sum_probs=172.6
Q ss_pred eeEeeEEeccCCCCeeE-----EEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10566 336 TCQHRKTLEGHTLGVAY-----LAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 336 ~~~~~~~l~~h~~~V~~-----l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 409 (604)
+......+..|...... .+|+|||++|+.++. ++...|++||+.+++...... .+...+..++|+|||+.|+.
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEE
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEE
Confidence 34456677777665555 889999999999887 554469999999988765543 44445556789999999999
Q ss_pred EecCCeEEEEEcCC-Ceeeeeec--eeEE--EEEEcCCCCEEEEEe----------------------CCCeEEEEEcCC
Q psy10566 410 GGIRGQFYQCDIEG-QVLDSWEG--VRVN--CLWCRSDGKSVLAAD----------------------THHRIRTYNFEH 462 (604)
Q Consensus 410 ~~~dg~i~iwd~~~-~~~~~~~~--~~v~--~l~~s~~g~~l~~~~----------------------~dg~I~i~d~~~ 462 (604)
++.++.|++||+.+ +....+.. ..+. ...++++++.++... .+..|.+||+.+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999999964 33333322 2232 234589999887432 346799999998
Q ss_pred CcccccccCCCCeeEEEECC-CCCEEEEEecC------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 463 LTDSNLLQEDHPVMSFTIDA-TDRLALLNVST------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 463 ~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
++...+..+...+..+.|+| +++.++....+ ..|.++|...+.. ..+..+... ..+....++|+|+.|+..
T Consensus 178 g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~-~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 178 GESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEG-ESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTT-EEEEEEEECTTSSCEEEE
T ss_pred CceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCC-cccccceECCCCCEEEEE
Confidence 87777777777899999999 99998887763 3688888776543 333333221 123345578999977654
Q ss_pred eC-CC----cEEEEeCCCCcce--EEeeCCCC---CeeEEEEcCCCCcEEEEE--------eCCCcEEEECCCCCC
Q psy10566 536 SE-DG----KVYIWHVKRELPI--ATLSGHTR---TVSCVAWNPVYHQMIASV--------SDDCTVRIWGPHLNT 593 (604)
Q Consensus 536 s~-dg----~I~iwd~~~~~~~--~~l~~h~~---~V~~v~~sp~~~~~l~s~--------s~Dg~I~iW~~~~~~ 593 (604)
+. ++ .|++||+.+++.. ..+.++.. ....++|+|++..++++. ..+..|++|++.++.
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 43 22 3999999988743 33333111 012237999944333332 456789999998764
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=2.6e-13 Score=133.18 Aligned_cols=281 Identities=10% Similarity=0.031 Sum_probs=193.4
Q ss_pred cccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
+..+...+.+++++++|.++++...++.|.+||.. . ... ......+...+.+++++++|..+++...++ .|..|
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~--~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~--~i~~~ 83 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G--KIT-EYPLPTPDAKVMCLTISSDGEVWFTENAAN--KIGRI 83 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C--CEE-EEECSSTTCCEEEEEECTTSCEEEEETTTT--EEEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C--CeE-EecCCcccCceeeEEECCCCCEEEeCCCCC--eEEEE
Confidence 44566789999999999977776667899999976 2 211 122233456799999999998777766566 79999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCC
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHH 453 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg 453 (604)
|.. +.............+.++++.+++..+++...++.|..||.+++...... ...+..+++.++|+..++...++
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCC
Confidence 986 43322221123456899999999988888777889999999665443221 23688999999998777777788
Q ss_pred eEEEEEcCCCccccc-c-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 454 RIRTYNFEHLTDSNL-L-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~-~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
.|..||. +++.... . .....+..+++++++...++...++.|.+||. ++... .+..... ...+..+..+++|++
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~-~~~~~~i~~~~~g~l 238 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTP-NARPHAITAGAGIDL 238 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSST-TCCEEEEEECSTTCE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCC-CCCceeEEECCCCCE
Confidence 9999998 5443322 1 23456789999999997777667889999999 66543 2322111 112334455688887
Q ss_pred EEEEeCCCcEEEEeCCCCcceEE-eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 532 VASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.++...++.|.+||. +++.... +..+...+.++++ ++ +.++++.+ .+.|..++++++
T Consensus 239 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~-g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 239 WFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DG-ETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CS-SCEEEEET-TTEEEEEEEC--
T ss_pred EEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cC-CCEEEEec-CCcEEEEEcCcc
Confidence 776667889999998 4543222 3345567999999 77 67766655 566777776654
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=1.1e-14 Score=161.70 Aligned_cols=244 Identities=9% Similarity=0.012 Sum_probs=172.8
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe-------
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ------- 415 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~------- 415 (604)
|...+..++|||||++|+.+..++. ..|++||+.+++........ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4456889999999999988765431 27999999999876543211 23678999999999999988765
Q ss_pred ---------EEEEEcCCCe---eeeeec--e--eEEEEEEcCCCCEEEEEeC-----CCeEEEEEcCC------C--ccc
Q psy10566 416 ---------FYQCDIEGQV---LDSWEG--V--RVNCLWCRSDGKSVLAADT-----HHRIRTYNFEH------L--TDS 466 (604)
Q Consensus 416 ---------i~iwd~~~~~---~~~~~~--~--~v~~l~~s~~g~~l~~~~~-----dg~I~i~d~~~------~--~~~ 466 (604)
|++|++.+.. ...+.. + .+..+.++|||++++.++. +..|++||+.+ + ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 9999995322 122222 2 3678999999999888765 56899999976 4 233
Q ss_pred ccccCCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 467 NLLQEDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 467 ~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
.+..+...+.. .++++|+.++..+.. +.|.+||+.++. ....+..+.... .+..+.+++++.+++++..|+.
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD-VLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-EEEEEEEETTTEEEEEEEETTE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC-eEEEEEEEcCCEEEEEEEECCE
Confidence 33344444443 588899888877653 359999998764 234454443321 2333333467788889888884
Q ss_pred --EEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC---CCcEEEECCCCCC
Q psy10566 541 --VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD---DCTVRIWGPHLNT 593 (604)
Q Consensus 541 --I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~---Dg~I~iW~~~~~~ 593 (604)
|++||+.+|+.+..+..+.+.|..++++|++..++++.+. .++|..||+.+++
T Consensus 359 ~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 359 NTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6677887888888888888889999999984455555443 4789999998765
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=9.1e-15 Score=162.38 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=167.7
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCC-----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDT-----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC--- 370 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg-----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~--- 370 (604)
+|...+..++|||||++||.++.++ .|++||+. ++..... .+. + ..+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~--tg~~~~~-~~~-~-~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD--GAKELPD-VLE-R-VKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT--TTEEEEE-EEE-E-ECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCcc-ccc-C-cccceEEEEeCCCEEEEEEECCcccc
Confidence 4556789999999999999776543 89999998 3322211 222 1 23678999999999999887752
Q ss_pred -----------eEEEEEECCCceE--EEEec-CCCCCCeEEEEEecCCCEEEEEec-----CCeEEEEEcCC-------C
Q psy10566 371 -----------HELWVWNIETELL--RVKLN-HSPEDSLTSCSWNRDGTKFVCGGI-----RGQFYQCDIEG-------Q 424 (604)
Q Consensus 371 -----------~~i~vwd~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~-------~ 424 (604)
..|++|++.++.. ...+. ..+...+..+.|+|||++|+.++. +..|++||+++ .
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 1499999988752 12222 223455789999999999988775 56899999963 2
Q ss_pred -eeeeeece--eEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCcc---cccccCCC--CeeEEEECCCCCEEEEEec
Q psy10566 425 -VLDSWEGV--RVNCLWCRSDGKSVLAADTH----HRIRTYNFEHLTD---SNLLQEDH--PVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 425 -~~~~~~~~--~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~~~---~~~~~~~~--~i~~~~~s~~~~~l~~~~~ 492 (604)
....+..+ .+.. .++++|+.++..+.. +.|.+||+.+... ..++.+.. .+..+++++++.++++...
T Consensus 277 ~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 277 LKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp CCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 34444332 2222 578899888777653 3699999987642 33444433 5778899877788888888
Q ss_pred CCe--EEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE-e---CCCcEEEEeCCCCc
Q psy10566 493 TQG--VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG-S---EDGKVYIWHVKREL 550 (604)
Q Consensus 493 dg~--I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg-s---~dg~I~iwd~~~~~ 550 (604)
++. |++||+.+++.+..+..+.. .+..+.++++++.++.. + ..++|+.||+.+++
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~~~~---~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPLEVG---SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSS---EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCCEEEecCCCCc---eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 885 66778777877777766533 33444556787655533 3 24789999999877
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=2.7e-14 Score=138.75 Aligned_cols=245 Identities=11% Similarity=0.020 Sum_probs=185.4
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~ 390 (604)
.+++|++++.|+.|.+||.+ +++.+..+..+. ..+.++.++|+|+.++ +.++ .|..||. +++.+..+...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~----tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~--~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD----TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSK--GAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT----TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBS--EEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECC----CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCC--CEEEECC-CCCEEEEEcCC
Confidence 46789999999999999987 555667777665 4789999999999888 3344 6999999 88888888754
Q ss_pred CCCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCeeeeeec------e--eEEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy10566 391 PEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQVLDSWEG------V--RVNCLWCRSDGKSVLAADTHHRIRTYNFE 461 (604)
Q Consensus 391 ~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~------~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~ 461 (604)
....+.++.+.++|+.+++.+. ++.+..+|.+|+.+..+.. . ....+.+.++|+++++...++.|..||..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 3456889999999999999887 8889889999988777641 1 34456788999999999999999999998
Q ss_pred CCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc---eEEEEeeeCCCCCcEEEEEeCC
Q psy10566 462 HLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG---QFTIHSCFGGANQDFVASGSED 538 (604)
Q Consensus 462 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~sgs~d 538 (604)
++....+.....+.++...++++.++++..++.|..+|..+++.+.++...... ...+..+...++|+++++.+..
T Consensus 155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 155 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp -SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred -CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 766666665566778888999999999988889999999999999888743211 1123334445788888776421
Q ss_pred --------CcEEEEeC-CCCcceEEeeCCC--CCeeEEE
Q psy10566 539 --------GKVYIWHV-KRELPIATLSGHT--RTVSCVA 566 (604)
Q Consensus 539 --------g~I~iwd~-~~~~~~~~l~~h~--~~V~~v~ 566 (604)
+..+++.+ .+|+.+.++..+. +.|.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 234 HDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp TCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEE
T ss_pred ccccccccCCceEEEECCCCCEEEEecCcccccceeeee
Confidence 23345555 4677777776543 4555553
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=6.8e-15 Score=162.14 Aligned_cols=241 Identities=7% Similarity=-0.040 Sum_probs=169.6
Q ss_pred EeccCCCCeeEEEECCCCCeEEEE--eCCCceEEEEEECCCceEEEEecCCCCCCeE---------EEEEe--cCCCE-E
Q psy10566 342 TLEGHTLGVAYLAWSPDSSHLLVV--GPEDCHELWVWNIETELLRVKLNHSPEDSLT---------SCSWN--RDGTK-F 407 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~~~l~s~--~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l 407 (604)
.+.+|...+..++|+++.-+++.. +.++ ...+|....+.....+. .+...+. ...|+ |||+. |
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAG--RATLVRRRADGAEESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTT--EEEEEEECTTSCEEESS-CTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCC--cEEEEEECCCCCcceeC-CCCccccccccccCCccceeeeecCCCeEE
Confidence 456788899999999886666665 3355 67778754444444444 2334444 55566 99998 7
Q ss_pred EEEec-CCeEEEEEcC--C-Ceeeeeec-------eeEEEEEEcCCCCEEEEEeCC----------CeEEEEEcCC----
Q psy10566 408 VCGGI-RGQFYQCDIE--G-QVLDSWEG-------VRVNCLWCRSDGKSVLAADTH----------HRIRTYNFEH---- 462 (604)
Q Consensus 408 ~s~~~-dg~i~iwd~~--~-~~~~~~~~-------~~v~~l~~s~~g~~l~~~~~d----------g~I~i~d~~~---- 462 (604)
+.++. +..|+++++. + .....+.. ..+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 76654 5678888877 3 44444433 468899999999999998876 5899999988
Q ss_pred --Ccccccc-cCCCCeeEEEECCCCCEEEEEecC--------CeEEEEecC-CC---ceeeEeeccccceEEEEeeeCCC
Q psy10566 463 --LTDSNLL-QEDHPVMSFTIDATDRLALLNVST--------QGVHLWDLR-DR---ILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 463 --~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d--------g~I~lwd~~-~~---~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+....+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +......++... +....++|
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~---~~~~~~sp 251 (662)
T 3azo_A 175 DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA---IAQAEWAP 251 (662)
T ss_dssp CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC---EEEEEECT
T ss_pred cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce---EcceEECC
Confidence 5555555 556678889999999999988755 379999998 56 333333333343 33455679
Q ss_pred CCcEEEEEeCCC--cEEEEeCCCCcceEEeeCCCCC--------eeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 528 NQDFVASGSEDG--KVYIWHVKRELPIATLSGHTRT--------VSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 528 ~~~~l~sgs~dg--~I~iwd~~~~~~~~~l~~h~~~--------V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
+|+++++++.+| .|++||..+++.......+... +..++|+|+ +.++++++. +.++||.++
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLAN-GLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTT-SCEEEEEBS-SSCEEEEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCC-CEEEEEEEc-CccEEEEEE
Confidence 999888888888 6777777677654444433322 567899998 789999998 999999443
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=5.6e-15 Score=163.59 Aligned_cols=277 Identities=10% Similarity=-0.031 Sum_probs=180.1
Q ss_pred CCCCeEEEEECCC---eEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEEECCC
Q psy10566 311 PDGLKLATGSKDT---TVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVWNIET 380 (604)
Q Consensus 311 pdg~~lasgs~dg---~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~~~ 380 (604)
|+|++++....++ .-.||-.+...+....+... .+|...+.+++|||||++|+.+...+ ...|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6777776665443 34556544222222222221 24556789999999999998554321 13899999999
Q ss_pred ceEE-EEecCCCCCCeEEEEEecCCCEEEEEecCCe-------------EEEEEcCC-C----eeeeeece--eEEEEEE
Q psy10566 381 ELLR-VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ-------------FYQCDIEG-Q----VLDSWEGV--RVNCLWC 439 (604)
Q Consensus 381 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~-------------i~iwd~~~-~----~~~~~~~~--~v~~l~~ 439 (604)
++.. .... .......++|+|||+.|+.++.|.. |++|++.+ . .+.....+ .+..+.+
T Consensus 157 g~~~~~~~~--~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 157 GEWSKVDVI--EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp CCBCSSCCB--SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCcCCccc--CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 8864 1111 1111268899999999999988776 99999953 2 23222222 5788999
Q ss_pred cCCCCEEEEEeCCC----eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec----CCeEEEEecCCCce--eeE
Q psy10566 440 RSDGKSVLAADTHH----RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS----TQGVHLWDLRDRIL--LRK 509 (604)
Q Consensus 440 s~~g~~l~~~~~dg----~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~I~lwd~~~~~~--~~~ 509 (604)
+|||++++.++.++ .|++++..+.....+..+...+....+ +++. +++.+. ++.|.+||+.++.. ...
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 99999998887666 677777655555555555555566666 5666 555443 57899999987653 233
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeC---CCcE
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD---DCTV 584 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~---Dg~I 584 (604)
+..+.... .+..+.++ ++.++++...|+..+||.+. +++....+..+ .+.|..++++|++..++++.+. .++|
T Consensus 313 l~~~~~~~-~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v 390 (695)
T 2bkl_A 313 IVPEDSSA-SLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQI 390 (695)
T ss_dssp EECCCSSC-EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEE
T ss_pred EecCCCCC-eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 43332111 22323333 67889999999988888665 46666677665 6778889999984444444443 4789
Q ss_pred EEECCCCCC
Q psy10566 585 RIWGPHLNT 593 (604)
Q Consensus 585 ~iW~~~~~~ 593 (604)
++||+.+++
T Consensus 391 ~~~d~~~g~ 399 (695)
T 2bkl_A 391 YKTSVSTGK 399 (695)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999998765
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=8.5e-14 Score=136.98 Aligned_cols=245 Identities=11% Similarity=0.038 Sum_probs=172.9
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+..+..+.....+++|+|+|+ +++++..++.|..|+.. .. ...+..+...+.+++++|+|+.+++...++
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~----~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~- 90 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD----GQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLR- 90 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT----SC--EEEEESSCSSEEEEEECTTCCEEEEETTTT-
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC----CC--eEEEECCCCCcceeeECCCCcEEEEecCCC-
Confidence 34455666777889999999998 78888889999999987 22 344555777899999999999777666555
Q ss_pred eEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEEE----e-------------cCCeEEEEEcCCCeeeeee
Q psy10566 371 HELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVCG----G-------------IRGQFYQCDIEGQVLDSWE 430 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~----~-------------~dg~i~iwd~~~~~~~~~~ 430 (604)
.|.+||..+++....... .....+..++++|+|+.+++. + ..+.|..++..++......
T Consensus 91 -~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~ 169 (296)
T 3e5z_A 91 -RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIR 169 (296)
T ss_dssp -EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEEC
T ss_pred -eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeec
Confidence 799999988875443321 112346789999999988873 3 1346666776654433322
Q ss_pred c-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCcc---cccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 431 G-VRVNCLWCRSDGKSVLAADTHHRIRTYNFE-HLTD---SNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 431 ~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~-~~~~---~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
. .....++++|+++.+++.+.++.|.+||+. .+.. ...+ .....+..++++++|++.++. ++.|.+||.. +
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C
Confidence 2 257889999999999777778999999986 3322 1122 134456789999999866555 8899999986 6
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
+.+..+..+.. ...+ ++.+++++.|++++.++ +.-++.++.++
T Consensus 247 ~~~~~~~~~~~-~~~~--~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 247 DELGRVLTPQT-TSNL--CFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp CEEEEEECSSC-CCEE--EEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred CEEEEEECCCC-ceeE--EEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 77777765554 3332 33368888888888764 55666666543
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=2.5e-15 Score=154.22 Aligned_cols=249 Identities=10% Similarity=-0.045 Sum_probs=167.0
Q ss_pred EeeEEeccCCCC-----eeEEEECCCCCeEEEEeCC-CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe
Q psy10566 338 QHRKTLEGHTLG-----VAYLAWSPDSSHLLVVGPE-DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411 (604)
Q Consensus 338 ~~~~~l~~h~~~-----V~~l~~spd~~~l~s~~~d-~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 411 (604)
.....+..+... +..++|+|||++|+.+... +...|++||+.+++...... ........+.|+|||+.|+.++
T Consensus 21 ~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 21 VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVK 99 (396)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEE
T ss_pred cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEE
Confidence 334555544333 7788999999998877654 33479999999887654433 2222233478999999999999
Q ss_pred cCCeEEEEEcCCCe-eeeeece--eEEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEEcCCCc
Q psy10566 412 IRGQFYQCDIEGQV-LDSWEGV--RVNC-------------------LWCRSDGKSVLAA-----DTHHRIRTYNFEHLT 464 (604)
Q Consensus 412 ~dg~i~iwd~~~~~-~~~~~~~--~v~~-------------------l~~s~~g~~l~~~-----~~dg~I~i~d~~~~~ 464 (604)
.++.|++||+.+.. ....... .... ..++|+++.++.. ..+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 100 NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 99999999996433 2222211 1111 2456777766554 356689999998877
Q ss_pred ccccccCCCCeeEEEECC-CCCEEEEEecC------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 465 DSNLLQEDHPVMSFTIDA-TDRLALLNVST------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
...+..+...+..+.|+| +++.++..+.+ ..|.+||+..++... +..+. ....+....++|+|++|+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~-~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHA-EGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCC-TTEEEEEEEECTTSSCEEEEEE
T ss_pred EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccC-CCccccceEECCCCCEEEEEec
Confidence 666666677889999999 78877766543 358899987654332 22221 1224445667899998777765
Q ss_pred C-----CcEEEEeCCCCcceEEeeCCCCCeeEEEEcC-CCCcEEEEEe----------------CCCcEEEECCCCCC
Q psy10566 538 D-----GKVYIWHVKRELPIATLSGHTRTVSCVAWNP-VYHQMIASVS----------------DDCTVRIWGPHLNT 593 (604)
Q Consensus 538 d-----g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~l~s~s----------------~Dg~I~iW~~~~~~ 593 (604)
+ +.|++||+.+++........ . .. +.|+| + +.++++++ .++.|++||+.++.
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~~-~~~s~~d-g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 258 FKGQTDRVIYKANPETLENEEVMVMP-P-CS-HLMSNFD-GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ETTTCCEEEEEECTTTCCEEEEEECC-S-EE-EEEECSS-SSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred CCCCccceEEEEECCCCCeEEeeeCC-C-CC-CCccCCC-CceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 4 44999999988754433221 2 33 89999 8 66777654 34789999998765
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=1.1e-14 Score=161.40 Aligned_cols=248 Identities=15% Similarity=0.097 Sum_probs=162.8
Q ss_pred cCCCcEEEEEEcCCCCeEE-----EEECCCeEEEEEeCCCCceeEeeEEeccCCCCe--eEEEECCCCCeEEEEeCCCc-
Q psy10566 299 DHCDEVWFCKFSPDGLKLA-----TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV--AYLAWSPDSSHLLVVGPEDC- 370 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~la-----sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V--~~l~~spd~~~l~s~~~d~~- 370 (604)
+|...+.+++|||||++|| .|+.+.+|++||+..+ +... ..+...+ ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg----~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG----EWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC----CBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC----CCcC--CcccCcccccceEEecCCCEEEEEEecCCC
Confidence 5667899999999999998 4444578999999832 2110 1122223 68999999999999988651
Q ss_pred ----------eEEEEEECCCceE--EEEec-CCCCCCeEEEEEecCCCEEEEEecCC----eEEEEEcCCCeeeeeece-
Q psy10566 371 ----------HELWVWNIETELL--RVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRG----QFYQCDIEGQVLDSWEGV- 432 (604)
Q Consensus 371 ----------~~i~vwd~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~- 432 (604)
..|++|++.++.. ...+. ..+...+.++.|+|||++++.++.++ .|++|+..+.....+...
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 271 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV 271 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC
Confidence 2499999988762 22222 23445788999999999998887766 677777643333333322
Q ss_pred -eEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCcc---cccccC--CCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 433 -RVNCLWCRSDGKSVLAADT----HHRIRTYNFEHLTD---SNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 433 -~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~~~---~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
.+....+ ++|. ++..+. ++.|.+||+.+... ..++.+ ...+..++++ ++.++++...++..++|.+.
T Consensus 272 ~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 272 GAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp SCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 3344444 5666 554443 57899999987653 334433 3457788888 67788888889988877654
Q ss_pred -CCceeeEeeccccceEEEEeeeCCCCCcEEEEEe----CCCcEEEEeCCCCcceEEeeCC
Q psy10566 503 -DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGS----EDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 503 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs----~dg~I~iwd~~~~~~~~~l~~h 558 (604)
+++..+.+..+... .+..+.++++++.++... ..++|++||+.+++. ..+..+
T Consensus 349 ~~g~~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~~ 406 (695)
T 2bkl_A 349 LKGKPVRTVQLPGVG--AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAKV 406 (695)
T ss_dssp TTCCEEEECCCSSSS--EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEEC
T ss_pred CCCCeeEEecCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEecC
Confidence 35555555433221 344455668887666332 347899999998773 344433
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.63 E-value=8.9e-14 Score=136.83 Aligned_cols=238 Identities=11% Similarity=0.056 Sum_probs=166.1
Q ss_pred EEeccCCCCeeEEEECCCCC-eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSS-HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 419 (604)
..+..+.....+++|+|+++ .++++..++ .|+.||..++ ...+. .+...+.+++++++|+.+++...++.|.+|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~--~i~~~~~~~~--~~~~~-~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQN--RTWAWSDDGQ--LSPEM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGT--EEEEEETTSC--EEEEE-SSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCC--EEEEEECCCC--eEEEE-CCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 34444566788999999998 566666666 8999999988 33333 345678999999999988877778999999
Q ss_pred Ec-CCCeeeeee---c---eeEEEEEEcCCCCEEEEE----e-------------CCCeEEEEEcCCCcccccccCCCCe
Q psy10566 420 DI-EGQVLDSWE---G---VRVNCLWCRSDGKSVLAA----D-------------THHRIRTYNFEHLTDSNLLQEDHPV 475 (604)
Q Consensus 420 d~-~~~~~~~~~---~---~~v~~l~~s~~g~~l~~~----~-------------~dg~I~i~d~~~~~~~~~~~~~~~i 475 (604)
|. +++...... + ..+..++++|+|+.+++. + ..+.|..++.. +............
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 99 565433221 1 145679999999987763 2 13466666655 4433344455667
Q ss_pred eEEEECCCCCEEEEEecCCeEEEEecC-CCce---eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc
Q psy10566 476 MSFTIDATDRLALLNVSTQGVHLWDLR-DRIL---LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~dg~I~lwd~~-~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~ 551 (604)
..++|+|+++.+++.+.++.|++||+. ++.. ...+..+.. ....+.++++|++.++. ++.|.+||.. ++.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~---~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG---KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS---CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC---CCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 899999999998777778999999997 4544 233311111 12234456889866666 8899999986 788
Q ss_pred eEEeeCCCCCeeEEEE-cCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 552 IATLSGHTRTVSCVAW-NPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 552 ~~~l~~h~~~V~~v~~-sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+..+..+.. +++++| .|+ +..|+.++.++ +.-+++.+..
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPE-GRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EEEEECSSC-CCEEEEESTT-SCEEEEEETTE-EEEEECSCCB
T ss_pred EEEEECCCC-ceeEEEECCC-CCEEEEEcCCe-EEEEEccccc
Confidence 888888877 999999 577 66777777664 4344554443
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=7.6e-14 Score=139.54 Aligned_cols=257 Identities=12% Similarity=0.046 Sum_probs=179.1
Q ss_pred CCCeEEEEEeCCCCceeEeeEEec------cCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 321 KDTTVIIWDVDPVTFTCQHRKTLE------GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 321 ~dg~i~iwd~~~~~~~~~~~~~l~------~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
.+++|.+||.+ +.+....+. ........+++. +++.+++...++ .|.+||..+++.+..+. ....
T Consensus 15 ~~~~l~~~d~~----t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~--~v~viD~~t~~~~~~i~--~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPA----TCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSH--VIFAIDINTFKEVGRIT--GFTS 85 (328)
T ss_dssp CCBEEEEEETT----TTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGT--EEEEEETTTCCEEEEEE--CCSS
T ss_pred CCceEEEEECC----CCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCC--EEEEEECcccEEEEEcC--CCCC
Confidence 37899999987 333322221 112345677774 344444444455 89999999999888775 3356
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCC-Ceeeeee-ce------eEEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCc
Q psy10566 395 LTSCSWNRDGTKFVCGGIRGQFYQCDIEG-QVLDSWE-GV------RVNCLWCRSDGKSVLAAD--THHRIRTYNFEHLT 464 (604)
Q Consensus 395 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~-~~------~v~~l~~s~~g~~l~~~~--~dg~I~i~d~~~~~ 464 (604)
...++++++++.+++...++.|.+||... +....+. +. ....+++ ++..+++++ .++.|.++|..+.+
T Consensus 86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 89999999985444444899999999954 4444443 22 4556666 455555555 48899999999887
Q ss_pred ccccccCCCCeeEEEECCCCCEEEEEecC----------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEE
Q psy10566 465 DSNLLQEDHPVMSFTIDATDRLALLNVST----------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 534 (604)
....+........++++|+|++++++..+ +.|.+||..+++....+...... ....+.++|+++.+++
T Consensus 164 ~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~--~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 164 VVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD--WPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC--CCEEEEECTTSCEEEE
T ss_pred EEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC--CceeEEEecCCCEEEE
Confidence 66665555566789999999977766554 78999999999887766532211 1223455688888888
Q ss_pred EeCCCcEEEEeCCCCcceEE--eeCCCCCeeEEEEcCCCCcEEEEE----eCCCcEEEECCCCCC
Q psy10566 535 GSEDGKVYIWHVKRELPIAT--LSGHTRTVSCVAWNPVYHQMIASV----SDDCTVRIWGPHLNT 593 (604)
Q Consensus 535 gs~dg~I~iwd~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~l~s~----s~Dg~I~iW~~~~~~ 593 (604)
+.. .|++||..+++.... +..+.....+++++|+++.++++. ..++.|.+|+.+ ++
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 755 899999998876421 222246789999999657888887 778999999998 54
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.63 E-value=9.5e-14 Score=139.84 Aligned_cols=234 Identities=20% Similarity=0.270 Sum_probs=153.8
Q ss_pred CcEEEEEEcCCCCeEEEEECC---Ce--EEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--------
Q psy10566 302 DEVWFCKFSPDGLKLATGSKD---TT--VIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-------- 368 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~d---g~--i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-------- 368 (604)
..+.+++|||||++||.++.+ +. |.+|++. ++... .... +.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~--~g~~~--~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE--TLSSK--KILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT--TTEEE--EEEE-ESE-EEEEEECTTSSEEEEEEECCCC-----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC--CCceE--EEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcE
Confidence 568889999999999988754 34 6666766 33322 2222 233 9999999999999988743
Q ss_pred -----------------CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---------eEEEEEcC
Q psy10566 369 -----------------DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---------QFYQCDIE 422 (604)
Q Consensus 369 -----------------~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------~i~iwd~~ 422 (604)
....|++||+.+++....+.. . .+..++|+|+| .++++..++ .|.++| .
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~ 207 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-D 207 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-T
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-C
Confidence 124799999999887344432 2 68899999999 777775542 455556 4
Q ss_pred CCeeeeeeceeEEEEEEcCCCCEEEEEeCC--------CeEEEEEcCCCccccccc-CCCCeeE-EEECCCCCEEEEEec
Q psy10566 423 GQVLDSWEGVRVNCLWCRSDGKSVLAADTH--------HRIRTYNFEHLTDSNLLQ-EDHPVMS-FTIDATDRLALLNVS 492 (604)
Q Consensus 423 ~~~~~~~~~~~v~~l~~s~~g~~l~~~~~d--------g~I~i~d~~~~~~~~~~~-~~~~i~~-~~~s~~~~~l~~~~~ 492 (604)
++ ...+... .....++|+|+.++.++.+ ..|.+|| +++...+.. +...+.. +.|+ ++ ++++++.
T Consensus 208 ~~-~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 208 GK-EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp TE-EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred Cc-eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 43 3333222 2222349999998887754 3688888 444333333 3566775 8999 88 8888999
Q ss_pred CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcE-EEEeCCCCcceEEeeCCCCC
Q psy10566 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV-YIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 493 dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I-~iwd~~~~~~~~~l~~h~~~ 561 (604)
++.+++| +.+++... +..+.. .+..+.+++ .++++++.++.. .||.+. ++ ...+..|...
T Consensus 282 ~~~~~l~-~~~g~~~~-~~~~~~---~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 282 EGSVNLY-IWDGEIKP-IAKGRH---WIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp TTEEEEE-EESSSEEE-EECSSS---EEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred CCcEEEE-EcCCceEE-EecCCC---eEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 9999999 87665533 333333 333444556 677777777654 667665 54 5556666543
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=3.6e-13 Score=143.70 Aligned_cols=270 Identities=11% Similarity=0.070 Sum_probs=192.6
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC--CceEEEEec
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE--TELLRVKLN 388 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~--~~~~~~~~~ 388 (604)
|.+.++++...+++|.++|.. +.+.+..+.. ...+..+.|+|||+++++++.++ .|.+||+. +++.+..+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~----t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg--~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGS----TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDG--KVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETT----TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTS--EEEEEETTSSSCCEEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECC----CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCC--eEEEEECCCCCCcEeEEEe
Confidence 444567777789999999988 4455556653 33577999999999999998887 89999995 777777776
Q ss_pred CCCCCCeEEEEEe----cCCCEEEEEecC-CeEEEEEc-CCCeeeeeec-------------eeEEEEEEcCCCCEEE-E
Q psy10566 389 HSPEDSLTSCSWN----RDGTKFVCGGIR-GQFYQCDI-EGQVLDSWEG-------------VRVNCLWCRSDGKSVL-A 448 (604)
Q Consensus 389 ~~~~~~v~~~~~~----~~~~~l~s~~~d-g~i~iwd~-~~~~~~~~~~-------------~~v~~l~~s~~g~~l~-~ 448 (604)
.+ .....++|+ |||+++++++.. +.|.++|. +.+.++.+.. .++..+..++++..++ .
T Consensus 238 ~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 238 IG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp CC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 43 346899999 699988887664 89999998 4555554431 1577888888866544 4
Q ss_pred EeCCCeEEEEEcCCCccc--ccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec-cccce--EEEEe
Q psy10566 449 ADTHHRIRTYNFEHLTDS--NLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG-VTQGQ--FTIHS 522 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~-~~~~~--~~i~~ 522 (604)
....|.|.++|....... ..+........+.|+|++++++++. .++.|.++|+.+++.+..+.. ..... ....
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~- 394 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN- 394 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-
T ss_pred ecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-
Confidence 455689999998765322 2223345567889999999987766 578999999999988776654 11110 1111
Q ss_pred eeCCCCC-cEEEEEe-CCCcEEEEeCCC-------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC-------CCcEEE
Q psy10566 523 CFGGANQ-DFVASGS-EDGKVYIWHVKR-------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSD-------DCTVRI 586 (604)
Q Consensus 523 ~~~~~~~-~~l~sgs-~dg~I~iwd~~~-------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~-------Dg~I~i 586 (604)
++.|++ .+.+++. .++.|.++|..+ .+.+.++......-..+..+|+ +..+..... ..+|.+
T Consensus 395 -~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~-~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 395 -FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN-SQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp -EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT-CSEEEEECTTCSSHHHHTCEEE
T ss_pred -eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCC-CCeEEEecCCCCCcccCceEEE
Confidence 234664 4444543 468999999987 6778888766444456789999 555555442 358999
Q ss_pred ECCCCC
Q psy10566 587 WGPHLN 592 (604)
Q Consensus 587 W~~~~~ 592 (604)
+|+.+.
T Consensus 473 ~d~~~~ 478 (567)
T 1qks_A 473 FDIKAM 478 (567)
T ss_dssp EEGGGC
T ss_pred EECCcc
Confidence 999876
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=6.3e-13 Score=141.83 Aligned_cols=295 Identities=13% Similarity=0.038 Sum_probs=202.6
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC----CCCCeEEEEe
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS----PDSSHLLVVG 366 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s----pd~~~l~s~~ 366 (604)
.+.+..+.. ...+..+.|||||+++++++.|+.|.+||+.. .+.+.+..+... .....++|+ |||++++++.
T Consensus 187 ~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~--~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 187 YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWM--KEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTS--SSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEE
T ss_pred CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCC--CCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEE
Confidence 344555543 23577999999999999999999999999841 133445555543 346799999 6999999888
Q ss_pred CCCceEEEEEECCCceEEEEecCCC----------CCCeEEEEEecCCCEEEE-EecCCeEEEEEcCCC-e--eeeee-c
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSP----------EDSLTSCSWNRDGTKFVC-GGIRGQFYQCDIEGQ-V--LDSWE-G 431 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~-~--~~~~~-~ 431 (604)
... ++|.++|..+.+.+..+.... ...+..+..++++..++. ...+|.|.++|.... . +..+. +
T Consensus 263 ~~~-~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~ 341 (567)
T 1qks_A 263 YWP-PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE 341 (567)
T ss_dssp EET-TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC
T ss_pred ccC-CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc
Confidence 765 489999999998877665221 225778888887665544 455689999998532 1 11221 2
Q ss_pred eeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCcccccccC----CCCeeEEE-ECCCCCEEEEEe--cCCeEEEEecCC
Q psy10566 432 VRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLTDSNLLQE----DHPVMSFT-IDATDRLALLNV--STQGVHLWDLRD 503 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~~~~~~~~----~~~i~~~~-~s~~~~~l~~~~--~dg~I~lwd~~~ 503 (604)
....++.|+|+|++++++. .++.|.++|..+++....+.. .++-.... ++|++..+++.+ .++.|.++|..+
T Consensus 342 ~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 342 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 3466789999999987765 578999999998765443332 11111222 578755555443 468999999987
Q ss_pred -------CceeeEeeccccceEEEEeeeCCCCCcEEEEEeC-------CCcEEEEeCCCC-----c-ceEEee-------
Q psy10566 504 -------RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE-------DGKVYIWHVKRE-----L-PIATLS------- 556 (604)
Q Consensus 504 -------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-------dg~I~iwd~~~~-----~-~~~~l~------- 556 (604)
.+.++++.........+ ..+|+++++++... .++|.++|+.+. . ....+.
T Consensus 422 ~~~~~~~~kvv~~i~~~g~g~~~i---~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~ 498 (567)
T 1qks_A 422 EGHPDNAWKILDSFPALGGGSLFI---KTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGI 498 (567)
T ss_dssp TTCTTTBTSEEEEEECSCSCCCCE---ECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTC
T ss_pred CCCccccCEEEEEEecCCCCCEEE---EeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecccccccc
Confidence 56777776543332222 34699999988763 359999999876 2 123332
Q ss_pred -CCCCCeeEEEEcCCCCcEEEEEe----CCCcEEEECCCCCC
Q psy10566 557 -GHTRTVSCVAWNPVYHQMIASVS----DDCTVRIWGPHLNT 593 (604)
Q Consensus 557 -~h~~~V~~v~~sp~~~~~l~s~s----~Dg~I~iW~~~~~~ 593 (604)
.-...+..+.|+|+|..+++|.. .++.|.|+|.++.+
T Consensus 499 ~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 499 TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 12357899999999666666643 37999999998875
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.62 E-value=3.8e-13 Score=134.61 Aligned_cols=241 Identities=11% Similarity=0.046 Sum_probs=164.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE-- 368 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d-- 368 (604)
......+.++...+.+++|+|+|++++++..++.|.+||.+ ++. .......+...+.+++|+|+|+.+++...+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~--~~~--~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~ 109 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE--TKE--IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFK 109 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTT--TCC--EEEEEECSSSSEEEEEECTTSCEEEEECTTSS
T ss_pred cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCC--CCc--EEEEeeCCCCCcceEEECCCCcEEEEeCCCCC
Confidence 34556677788888999999999988888889999999987 222 222222456789999999999887776655
Q ss_pred --CceEEEEEECCCceEEEEec-CCCCCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCeeeeeec--eeEEEE
Q psy10566 369 --DCHELWVWNIETELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGI------RGQFYQCDIEGQVLDSWEG--VRVNCL 437 (604)
Q Consensus 369 --~~~~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~--~~v~~l 437 (604)
+ .|.+||..++.....+. ......+.+++++|+|+.+++... .+.|..+|.++..+..+.. ..+..+
T Consensus 110 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 187 (333)
T 2dg1_A 110 STG--GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGI 187 (333)
T ss_dssp SCC--EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEE
T ss_pred CCc--eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccce
Confidence 4 69999998887553332 223456899999999988776654 3567777776533333322 257889
Q ss_pred EEcCCCCEEEEE-eCCCeEEEEEcCC-Ccccc------c--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 438 WCRSDGKSVLAA-DTHHRIRTYNFEH-LTDSN------L--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 438 ~~s~~g~~l~~~-~~dg~I~i~d~~~-~~~~~------~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
+++|+|+.++++ +.++.|.+||..+ +.... . ......+..++++++|++.++...++.|.+||. +++.+
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~ 266 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPI 266 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEE
Confidence 999999866544 5678999999864 22111 0 111235778999999998887777899999998 46666
Q ss_pred eEeeccccc---eEEEEeeeCCCCCcEEEEEeCC
Q psy10566 508 RKFQGVTQG---QFTIHSCFGGANQDFVASGSED 538 (604)
Q Consensus 508 ~~~~~~~~~---~~~i~~~~~~~~~~~l~sgs~d 538 (604)
..+...... ...+..+.++++++.|+.++.+
T Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 267 GQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 666543220 0011223335887777665555
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=2.3e-13 Score=131.77 Aligned_cols=237 Identities=9% Similarity=-0.046 Sum_probs=167.1
Q ss_pred CeeEEEECCCCCeEEEE-eCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeee
Q psy10566 349 GVAYLAWSPDSSHLLVV-GPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~-~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 427 (604)
...+++++++|+.++++ +.++ .|.+||..++.... +.......+.+++++++++.+++.. ++.|..||.++....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~--~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYG--RVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSC--EEEEECC-----EE-CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCC--cEEEecCCCcccce-EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 67899999999866624 4455 79999987655332 2223334678999999998666655 889999999876555
Q ss_pred eee--c-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 428 SWE--G-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 428 ~~~--~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
.+. + ..+..++++++|+.+++...++.|.+|+..+....... .....+..++++++++.+++...++.|.+||...
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 443 2 36889999999997777777899999976554332221 2234678899999999777777788999999887
Q ss_pred CceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 504 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
............. ...+...++|.++++...++.|.+||............+...+.+++++|+ +.++++...++.
T Consensus 181 ~~~~~~~~~~~~~---p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~ 256 (270)
T 1rwi_B 181 NNQVVLPFTDITA---PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD-RTVYVADRGNDR 256 (270)
T ss_dssp CCEEECCCSSCCS---EEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT-CCEEEEEGGGTE
T ss_pred CceEeecccCCCC---ceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC-CCEEEEECCCCE
Confidence 6544322222122 233455688887777777899999998765443322234467899999999 689999999999
Q ss_pred EEEECCCCCC
Q psy10566 584 VRIWGPHLNT 593 (604)
Q Consensus 584 I~iW~~~~~~ 593 (604)
|+++++...+
T Consensus 257 v~~~~~~~~~ 266 (270)
T 1rwi_B 257 VVKLTSLEHH 266 (270)
T ss_dssp EEEECCCGGG
T ss_pred EEEEcCCCcc
Confidence 9999997654
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=4.8e-12 Score=124.19 Aligned_cols=276 Identities=8% Similarity=-0.030 Sum_probs=189.8
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
.....+.+++++++|.+.++...++.|.+||.. . .... ..+..+...+.++++.+++...++...++ .|..||.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~--~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~--~v~~~d~ 90 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G--RIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGAN--KIGKLSK 90 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S--CEEE-EECSSTTCCEEEEEECTTSCEEEEETTTT--EEEEECT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C--ceEE-EECCCCCCcceeEEECCCCCEEEEecCCC--eEEEECC
Confidence 345678999999999987777678999999875 2 2221 23333446789999999998777665555 7999998
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee-ee--ceeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS-WE--GVRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~--~~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
. ++............+.++++.++++.+++...++.|..+|.+++.... .. ...+..+++.++|+..++...++.|
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 8 554332222234568999999999988887778899999998655422 11 2368899999999966666667899
Q ss_pred EEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE-eeccccceEEEEeeeCCCCCcEE
Q psy10566 456 RTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK-FQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 456 ~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
..||. ++...... .....+..+++++++...++....+.|.+||. ++..... ...... .+..+...++|++.
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~---~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNA---RPHAITAGKNSEIW 244 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC---CEEEEEECSTTCEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCC---CceEEEECCCCCEE
Confidence 99998 43332221 22356889999999987777667788999998 4443332 111222 23334556888877
Q ss_pred EEEeCCCcEEEEeCCCCcceE-EeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIA-TLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~-~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
++...++.|..||. +++... .+......+.++++.++ +.++++.. . .|..++++
T Consensus 245 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 245 FTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKD-GSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTT-SCEEEECS-S-EEEEEEEC
T ss_pred EeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCC-CCEEEEcc-C-ceEEeCCC
Confidence 77666799999998 454332 23334567899999998 66666554 4 66666653
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=4.4e-13 Score=130.19 Aligned_cols=210 Identities=10% Similarity=-0.027 Sum_probs=162.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec---eeE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRV 434 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v 434 (604)
.++.|++++.++ .|.+||.++|+.+.++.......+.++.++|+|+.++ +.++.|..||.+|+.+..+.. ..+
T Consensus 4 ~~~~lv~~~~~~--~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWN--KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCS--EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCC--EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcCCCCccc
Confidence 356777877777 8999999999999888743324688999999999888 457889999999998888875 368
Q ss_pred EEEEEcCCCCEEEEEeC-CCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 435 NCLWCRSDGKSVLAADT-HHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 435 ~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
.++.+.++|+.+++.+. ++.|..+|... +....+. .......+++.++|+++++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88999999999999887 77888887643 3222111 11234566789999999999999999999998 999
Q ss_pred eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCC------CCeeEEEEcCCCCcEEEEE
Q psy10566 507 LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT------RTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 507 ~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~------~~V~~v~~sp~~~~~l~s~ 578 (604)
+.++...... ..+ ...++|+++++++.+++|..+|..+|+.+.++..+. ..+..+...++ +.++++.
T Consensus 158 ~w~~~~~~~~-~~~---~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~-G~i~v~~ 230 (276)
T 3no2_A 158 LNSVKLSGTP-FSS---AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN-GGLYICN 230 (276)
T ss_dssp EEEEECSSCC-CEE---EECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT-SCEEEEE
T ss_pred EEEEECCCCc-cce---eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC-CCEEEEe
Confidence 8888764322 222 224789999999989999999999999999886442 23788888888 6777766
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.1e-12 Score=129.95 Aligned_cols=244 Identities=11% Similarity=0.108 Sum_probs=168.9
Q ss_pred CCCCeeEEEECCCCCeEEE-------EeCCCceEEEEEECCCceEEEEec---CCCCCCeEEEEEecC-CCEEEEEecCC
Q psy10566 346 HTLGVAYLAWSPDSSHLLV-------VGPEDCHELWVWNIETELLRVKLN---HSPEDSLTSCSWNRD-GTKFVCGGIRG 414 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s-------~~~d~~~~i~vwd~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~s~~~dg 414 (604)
.-....+++|++++..+++ ...++ .|.+||..+++...... .++...+.+++++++ ++.++ ++..+
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~ 92 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAG--EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRL 92 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECC--EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTT
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCC--EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCC
Confidence 3456789999999987776 34555 79999988887643322 013356899999999 65444 44455
Q ss_pred eEEEEEcCCCeeee-ee------ceeEEEEEEcCCCCEEEEEeCC---------------CeEEEEEcCCCcccccccCC
Q psy10566 415 QFYQCDIEGQVLDS-WE------GVRVNCLWCRSDGKSVLAADTH---------------HRIRTYNFEHLTDSNLLQED 472 (604)
Q Consensus 415 ~i~iwd~~~~~~~~-~~------~~~v~~l~~s~~g~~l~~~~~d---------------g~I~i~d~~~~~~~~~~~~~ 472 (604)
.|..||.+++.... .. ...+.+++++++|+.+++...+ +.|..||.. +.........
T Consensus 93 ~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~ 171 (314)
T 1pjx_A 93 GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF 171 (314)
T ss_dssp EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred CEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence 78999988554322 11 1247899999999887776655 567777765 3333333333
Q ss_pred CCeeEEEEC----CCCCEEEEE-ecCCeEEEEecC-CCce-----eeEeeccc-cceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 473 HPVMSFTID----ATDRLALLN-VSTQGVHLWDLR-DRIL-----LRKFQGVT-QGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 473 ~~i~~~~~s----~~~~~l~~~-~~dg~I~lwd~~-~~~~-----~~~~~~~~-~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
.....++++ ++++.++++ ..++.|.+||+. ++.. ...+..+. . ....+.++++|++.++...++.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~---~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG---GADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC---EEEEEEEBTTCCEEEEEETTTE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC---CCCceEECCCCCEEEEEcCCCE
Confidence 456789999 999766655 467899999986 4432 12222221 1 2233455688998888888999
Q ss_pred EEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCc-EEEEEeCCCcEEEECCCCCCCCCc
Q psy10566 541 VYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQ-MIASVSDDCTVRIWGPHLNTNKSP 597 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~-~l~s~s~Dg~I~iW~~~~~~~~~~ 597 (604)
|.+||..+++.+..+..+...+.+++|+|+ +. ++++...++.|..|++.......+
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~~~~~g~~~~ 305 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQRNGKKQY 305 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECSSCBCCCG
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEeCCCCCcccc
Confidence 999999888888888777788999999999 56 666667778999999876543333
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.57 E-value=3.3e-13 Score=150.48 Aligned_cols=276 Identities=11% Similarity=0.032 Sum_probs=178.4
Q ss_pred CCCCeEEEEECCCe---EEEEEeCCC---CceeEeeEE----eccCCCCeeEEEECCCCCeEEEEeCC-Cc--eEEEEEE
Q psy10566 311 PDGLKLATGSKDTT---VIIWDVDPV---TFTCQHRKT----LEGHTLGVAYLAWSPDSSHLLVVGPE-DC--HELWVWN 377 (604)
Q Consensus 311 pdg~~lasgs~dg~---i~iwd~~~~---~~~~~~~~~----l~~h~~~V~~l~~spd~~~l~s~~~d-~~--~~i~vwd 377 (604)
|+|++++....++. -.+|..+.. .+..+.+.. -.+|...+..++|||||++|+.++.+ |. ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 78887776654433 566766522 122222111 12234468899999999999887654 21 3799999
Q ss_pred CCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCe--------------EEEEEcCC-C----eeeeeece--eEEE
Q psy10566 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ--------------FYQCDIEG-Q----VLDSWEGV--RVNC 436 (604)
Q Consensus 378 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~--------------i~iwd~~~-~----~~~~~~~~--~v~~ 436 (604)
+.+++...... +...+..++|+|| +.|+.++.++. |++|++.+ . .+.....+ .+..
T Consensus 196 l~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 196 VADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp TTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99998755322 1112357899999 99988887654 88999842 2 22222222 4788
Q ss_pred EEEcCCCCEEEEEeCCC-----eEEEEEcCCC--c-ccccccCCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCC
Q psy10566 437 LWCRSDGKSVLAADTHH-----RIRTYNFEHL--T-DSNLLQEDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDR 504 (604)
Q Consensus 437 l~~s~~g~~l~~~~~dg-----~I~i~d~~~~--~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~ 504 (604)
+.++|||++++..+.++ .|++||+.++ . ...+..+....... ++|+++.++..+.+ +.|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 99999999988877544 8999999876 4 44444444444444 34889988887764 45999999875
Q ss_pred c-eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC-CCcceEEeeCC-CCCeeEEEEcCCCCcEEEEEeC-
Q psy10566 505 I-LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK-RELPIATLSGH-TRTVSCVAWNPVYHQMIASVSD- 580 (604)
Q Consensus 505 ~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~-~~~~~~~l~~h-~~~V~~v~~sp~~~~~l~s~s~- 580 (604)
. ....+..+... .+..+.+. ++.++++...|+..+||.+. +++....+..+ .+.|..++++|++..++++.+.
T Consensus 352 ~~~~~~l~~~~~~--~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~ 428 (741)
T 1yr2_A 352 TPRFDTVVPESKD--NLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSF 428 (741)
T ss_dssp SCEEEEEECCCSS--EEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEET
T ss_pred ccccEEEecCCCC--eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCC
Confidence 2 33333333322 23323332 56788888899987777554 46666667653 6778999999985445555443
Q ss_pred --CCcEEEECCCCCC
Q psy10566 581 --DCTVRIWGPHLNT 593 (604)
Q Consensus 581 --Dg~I~iW~~~~~~ 593 (604)
.++|++||+.+++
T Consensus 429 ~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 429 TQPATVLALDPATAK 443 (741)
T ss_dssp TEEEEEEEEETTTTE
T ss_pred CCCCEEEEEECCCCc
Confidence 4789999998764
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=5.7e-13 Score=128.93 Aligned_cols=238 Identities=8% Similarity=-0.039 Sum_probs=165.1
Q ss_pred cEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 303 EVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 303 ~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
...+++++++|++++ +.+.++.|.+|+.. ..........+...+.+++++++++.+++.. ++ .|.+||..+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~--~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATG----STGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NN--RVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCEEEEET-TT--EEEEECTTCS
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCC----CcccceEeeCCcCCcceeEECCCCCEEEEcC-CC--EEEEEeCCCc
Confidence 678999999999777 54678899999875 2221111123345688999999998666555 55 7999998776
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee--eec-eeEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS--WEG-VRVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~-~~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
.... +.......+.+++++++|+.+++...++.|.+|+........ ..+ ..+.+++++++|+.+++...++.|.+|
T Consensus 98 ~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 98 NQTV-LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CCEE-CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred eEee-eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 5432 222233568999999999988877788999999764322211 112 257889999999977777778899999
Q ss_pred EcCCCccccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 459 NFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 459 d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
|........... ....+..++++++|..+++...++.|.+||............+.. ....+.++++|+++++...
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN---TPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCS---CEEEEEECTTCCEEEEEGG
T ss_pred ecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCC---CceeEEECCCCCEEEEECC
Confidence 987755433222 236688999999997777777788999999876543322111112 2333455688998888889
Q ss_pred CCcEEEEeCCCCcc
Q psy10566 538 DGKVYIWHVKRELP 551 (604)
Q Consensus 538 dg~I~iwd~~~~~~ 551 (604)
++.|++|+....+.
T Consensus 254 ~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 254 NDRVVKLTSLEHHH 267 (270)
T ss_dssp GTEEEEECCCGGGS
T ss_pred CCEEEEEcCCCccc
Confidence 99999999876543
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=1.3e-11 Score=125.10 Aligned_cols=274 Identities=8% Similarity=-0.053 Sum_probs=179.9
Q ss_pred EEcCCCCeEEEEEC--CC---eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC----------CCceE
Q psy10566 308 KFSPDGLKLATGSK--DT---TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP----------EDCHE 372 (604)
Q Consensus 308 ~fspdg~~lasgs~--dg---~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~----------d~~~~ 372 (604)
...|+++++.+... .. +|.+||.. +.+.+..+.....+ .++++|||++++++.. ++ .
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~----t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~--~ 98 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAG----SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTD--Y 98 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECC----CCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCC--e
Confidence 34467776665542 22 88999987 44556666644443 9999999999998863 33 7
Q ss_pred EEEEECCCceEEEEecCC-C-----CCCeEEEEEecCCCEEEEEec--CCeEEEEEcCC-Ceeee-eeceeEEEEEEcCC
Q psy10566 373 LWVWNIETELLRVKLNHS-P-----EDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEG-QVLDS-WEGVRVNCLWCRSD 442 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~-~~~~~-~~~~~v~~l~~s~~ 442 (604)
|.+||..+.+....+... . ......++|+|||+++++++. ++.|.++| .. +.+.. +... .++.+.++
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~~~~~~~~ 175 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--TCYHIHPG 175 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--ceEEEEeC
Confidence 999999998877766432 0 123458999999999999874 47899999 74 44444 3221 12444555
Q ss_pred C-CEEEEEeCCCeEEEEEcCCCcccccc------cCCCCe-eEEEECCCCCEEEEEecCCeEEEEecCCCc--eeeEeec
Q psy10566 443 G-KSVLAADTHHRIRTYNFEHLTDSNLL------QEDHPV-MSFTIDATDRLALLNVSTQGVHLWDLRDRI--LLRKFQG 512 (604)
Q Consensus 443 g-~~l~~~~~dg~I~i~d~~~~~~~~~~------~~~~~i-~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~--~~~~~~~ 512 (604)
+ ..+++.+.||.+.++|. +++..... ....++ ....+.+++..++..+..+.+.+.|+.+.. .+..+..
T Consensus 176 ~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 176 APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeee
Confidence 4 45667778899999998 65443211 111221 234556666665555578899999997652 2222221
Q ss_pred ccc-------ceEEEEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 513 VTQ-------GQFTIHSCFGGANQDFVASGSE----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 513 ~~~-------~~~~i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
... .......+.++++++.++.+.. .+.|.++|..+++.+.++.. .....+++|+||+..++
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDL 333 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEE
Confidence 100 0011122345688887777643 35799999999999998864 33589999999943267
Q ss_pred EEEe-CCCcEEEECCCCCCC
Q psy10566 576 ASVS-DDCTVRIWGPHLNTN 594 (604)
Q Consensus 576 ~s~s-~Dg~I~iW~~~~~~~ 594 (604)
+++. .++.|.+||+.+++.
T Consensus 334 ~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 334 YALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEEcCCCCeEEEEECCCCCE
Confidence 7776 589999999988763
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=3.1e-12 Score=127.78 Aligned_cols=249 Identities=11% Similarity=0.069 Sum_probs=170.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
.....+++. +++.+++...++.|.+||.. +.+.+.++. .......++++++++.+++...++ .|.+||..++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~----t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~--~v~~iD~~t~ 115 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDIN----TFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDY--RIFIINPKTY 115 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETT----TCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCS--EEEEEETTTT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECc----ccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCC--eEEEEECCCC
Confidence 456778875 34555666668999999998 445555554 346688999999985444443566 8999999999
Q ss_pred eEEEEecCCCC----CCeEEEEEecCCCEEEEEe--cCCeEEEEEcC-CCeeeeeec-eeEEEEEEcCCCCEEEEEeCC-
Q psy10566 382 LLRVKLNHSPE----DSLTSCSWNRDGTKFVCGG--IRGQFYQCDIE-GQVLDSWEG-VRVNCLWCRSDGKSVLAADTH- 452 (604)
Q Consensus 382 ~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~-~~~~~~~~~-~~v~~l~~s~~g~~l~~~~~d- 452 (604)
+....+..+.. .....+++ ++..++++. .++.|.++|.. ++.+..+.. .....++++++|+.++++..+
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBC
T ss_pred eEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCc
Confidence 88776653321 14556777 344555554 48899999995 555555442 346788999999977666554
Q ss_pred ---------CeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE--eeccccceEE
Q psy10566 453 ---------HRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK--FQGVTQGQFT 519 (604)
Q Consensus 453 ---------g~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~--~~~~~~~~~~ 519 (604)
+.|.++|..+.+....+.. ......++++|+++.++++.. .|.+||..+++.... +......
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~--- 268 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTK--- 268 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSC---
T ss_pred cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCc---
Confidence 7899999988765544432 346899999999999988765 899999988875421 1111122
Q ss_pred EEeeeCCC-CCcEEEEE----eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 520 IHSCFGGA-NQDFVASG----SEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 520 i~~~~~~~-~~~~l~sg----s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
...+.++| ++.+.++. ..++.|.+||.. ++.+.++..- .....++|
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~ 319 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCW 319 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec-cCcceEEE
Confidence 22234456 56666666 678999999998 8888887632 33455665
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=7e-12 Score=125.61 Aligned_cols=274 Identities=14% Similarity=0.072 Sum_probs=179.4
Q ss_pred EEcCCCCeEEEEEC-----CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC--------CCceEEE
Q psy10566 308 KFSPDGLKLATGSK-----DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP--------EDCHELW 374 (604)
Q Consensus 308 ~fspdg~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~--------d~~~~i~ 374 (604)
...|+++.+..... ++.|.+.|.. +.+.+..+.....+ . ++++|||++++++.. +....|.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~----t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGE----AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETT----TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECC----CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 44678887776654 6789999988 55666666654454 4 999999999988762 1113799
Q ss_pred EEECCCceEEEEecCCC------CCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCE
Q psy10566 375 VWNIETELLRVKLNHSP------EDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKS 445 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~ 445 (604)
+||..+++....+..+. ......++|+|||++++++.. ++.|.++|+. ++.+..+.-... ...+....+.
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~ 191 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDT 191 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCce
Confidence 99999999888775322 124667999999999998874 6899999995 555555543211 1223334456
Q ss_pred EEEEeCCCeEEEEEcCC-Ccccc----ccc-CCCCee-EEEE-CCCCCEEEEEecCCeEEEEecCCCc--eeeEee----
Q psy10566 446 VLAADTHHRIRTYNFEH-LTDSN----LLQ-EDHPVM-SFTI-DATDRLALLNVSTQGVHLWDLRDRI--LLRKFQ---- 511 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~-~~~~~----~~~-~~~~i~-~~~~-s~~~~~l~~~~~dg~I~lwd~~~~~--~~~~~~---- 511 (604)
+++.+.||++.+.++.. ++... .+. ...++. ...| .++|++++ .+.+|.|+++|+.+.. ....+.
T Consensus 192 ~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred eEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence 66777777777777765 33211 111 112221 2355 36775555 5568999999997653 333332
Q ss_pred -----cc-ccceEEEEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 512 -----GV-TQGQFTIHSCFGGANQDFVASGSE----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 512 -----~~-~~~~~~i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
+. ...... +..+++++.++.... .+.|.++|..+++.+..+..- ..+++++++|++..+|
T Consensus 271 ~~~~~g~~p~g~q~---~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 271 AERADGWRPGGWQQ---VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLL 346 (386)
T ss_dssp HHHHTTEEECSSSC---EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEE
T ss_pred ccccccccCCCcce---eeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEE
Confidence 00 001111 222467777666542 257999999999999988643 3688999999954355
Q ss_pred EE-EeCCCcEEEECCCCCC
Q psy10566 576 AS-VSDDCTVRIWGPHLNT 593 (604)
Q Consensus 576 ~s-~s~Dg~I~iW~~~~~~ 593 (604)
++ ...++.|.++|..+++
T Consensus 347 y~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEEcCCCCeEEEEECCCCc
Confidence 44 5669999999999876
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=8.8e-12 Score=123.36 Aligned_cols=242 Identities=10% Similarity=0.089 Sum_probs=163.5
Q ss_pred ccCCCcEEEEEEcCCCCeEEE-------EECCCeEEEEEeCCCCceeEeeEE--eccCCCCeeEEEECCC-CCeEEEEeC
Q psy10566 298 NDHCDEVWFCKFSPDGLKLAT-------GSKDTTVIIWDVDPVTFTCQHRKT--LEGHTLGVAYLAWSPD-SSHLLVVGP 367 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~las-------gs~dg~i~iwd~~~~~~~~~~~~~--l~~h~~~V~~l~~spd-~~~l~s~~~ 367 (604)
.+.-....+++|+++|.++++ +..++.|.+||... +....... ..++...+.+++++++ ++.+++..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT--GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT--CCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC--CcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 334456789999999998887 67789999999762 22221111 1124467899999999 66555444
Q ss_pred CCceEEEEEECCCceEEEE-ecC---CCCCCeEEEEEecCCCEEEEEecC---------------CeEEEEEcCCCeeee
Q psy10566 368 EDCHELWVWNIETELLRVK-LNH---SPEDSLTSCSWNRDGTKFVCGGIR---------------GQFYQCDIEGQVLDS 428 (604)
Q Consensus 368 d~~~~i~vwd~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~ 428 (604)
.+ .|.+||.. ++.... ... .....+.+++++++|+.+++...+ +.|..||.+++....
T Consensus 91 ~~--~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 91 RL--GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp TT--EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE
T ss_pred CC--CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe
Confidence 43 59999998 765433 221 112358899999999888877665 578888877554433
Q ss_pred eec-eeEEEEEEc----CCCCEEEEE-eCCCeEEEEEcC-CCcc-----ccccc-CC-CCeeEEEECCCCCEEEEEecCC
Q psy10566 429 WEG-VRVNCLWCR----SDGKSVLAA-DTHHRIRTYNFE-HLTD-----SNLLQ-ED-HPVMSFTIDATDRLALLNVSTQ 494 (604)
Q Consensus 429 ~~~-~~v~~l~~s----~~g~~l~~~-~~dg~I~i~d~~-~~~~-----~~~~~-~~-~~i~~~~~s~~~~~l~~~~~dg 494 (604)
... .....++++ ++++.++++ ..++.|.+||.. .+.. ...+. +. ..+..++++++|.+.++...++
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 222 246788999 999766555 467899999976 2221 11111 11 4578899999999888887889
Q ss_pred eEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEE-EEeCCCcEEEEeCCC
Q psy10566 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGSEDGKVYIWHVKR 548 (604)
Q Consensus 495 ~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs~dg~I~iwd~~~ 548 (604)
.|.+||..+++.+..+..+.... ..+.++++++.|+ +...++.|..|+...
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~---~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKP---SNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCE---EEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEeEEEeCCCCCc---eeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999998777777666554333 3334478998554 555578999999874
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=4.1e-11 Score=117.39 Aligned_cols=237 Identities=6% Similarity=-0.028 Sum_probs=170.4
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 422 (604)
+..+...+.++++.++|..+++...++ .|.+||.. +.............+.++++.+++..+++...++.|..||.+
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~--~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKAN--MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTT--EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCC--cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 344556799999999998777665555 79999988 654433322344678999999999988887778999999987
Q ss_pred CCeeeeee----ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc--cCCCCeeEEEECCCCCEEEEEecCCeE
Q psy10566 423 GQVLDSWE----GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL--QEDHPVMSFTIDATDRLALLNVSTQGV 496 (604)
Q Consensus 423 ~~~~~~~~----~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I 496 (604)
++. ..+. ...+..+++.++|..+++...++.|..||. ++...... .....+..+++++++...++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 653 2222 236889999999988887777889999998 43332221 234568899999999877777778899
Q ss_pred EEEecCCCceeeE-eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-eeCCCCCeeEEEEcCCCCcE
Q psy10566 497 HLWDLRDRILLRK-FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 497 ~lwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~v~~sp~~~~~ 574 (604)
..||. +++.... ...... .+..+...++|++.++...++.|.+||. +++.... +..+...+.+++++++ +.+
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l 238 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPAS---GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG-IDL 238 (299)
T ss_dssp EEECT-TCCEEEEECSSTTC---CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCE
T ss_pred EEEcC-CCcEEEeeCCCCCC---cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC-CCE
Confidence 99998 6654432 111122 2233445678887777767889999999 6664332 3335567899999998 677
Q ss_pred EEEEeCCCcEEEECCC
Q psy10566 575 IASVSDDCTVRIWGPH 590 (604)
Q Consensus 575 l~s~s~Dg~I~iW~~~ 590 (604)
+++...++.|..|+..
T Consensus 239 ~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 239 WFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEETTTTEEEEEETT
T ss_pred EEeccCCceEEEECCC
Confidence 7776678889999983
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.49 E-value=9.8e-11 Score=118.70 Aligned_cols=248 Identities=9% Similarity=-0.071 Sum_probs=166.9
Q ss_pred cceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEEE
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYLA 354 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l~ 354 (604)
+.+..+.....+ .++|||||++++.+. .++.|.+||.. +.+....+.-. ......++
T Consensus 58 ~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~----t~~~~~~i~~~~~~~~~~g~~p~~~~ 131 (373)
T 2mad_H 58 SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV----TFLPIADIELPDAPRFDVGPYSWMNA 131 (373)
T ss_pred eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC----CCcEEEEEECCCccccccCCCccceE
Confidence 344455443344 899999999888875 36789999987 33334433211 12356899
Q ss_pred ECCCCCeEEEEeCCCceEEEEEECCCceEEEE-ecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCeeeeee--
Q psy10566 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVK-LNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWE-- 430 (604)
Q Consensus 355 ~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~-- 430 (604)
|+|||++|+++.......|.++| .+++.... +... . ++.+.|++ ..+++.+.||.+.++|..++......
T Consensus 132 ~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~---~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~ 205 (373)
T 2mad_H 132 NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--T---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVG 205 (373)
T ss_pred ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--c---eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEecc
Confidence 99999999998753113799999 99988777 5422 1 24555655 45667778999999998555442211
Q ss_pred ----c-ee-EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc--cccc-----------CCCCeeEEEECCCCCEEEEEe
Q psy10566 431 ----G-VR-VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS--NLLQ-----------EDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 431 ----~-~~-v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~--~~~~-----------~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+ .+ .....+.+++..++..+..+.+.+.|+...... ..+. .......+.++|+++.++++.
T Consensus 206 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 206 AMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred ccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 1 11 123456666666666667889999998654211 1110 012244578999999888875
Q ss_pred c----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEe
Q psy10566 492 S----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 492 ~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l 555 (604)
. .+.|.++|+.+++.+.++..... ...+.++++|+ .++++. .++.|.+||..+++.+.++
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~----p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD----VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEECCCC----cCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 4 35799999999999888864332 23345579999 777777 4899999999999998884
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=1.9e-12 Score=144.32 Aligned_cols=247 Identities=15% Similarity=0.069 Sum_probs=157.4
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECC-----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKD-----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC--- 370 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~d-----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~--- 370 (604)
+|...+..++|||||++||.++.+ ..|++||+..+ .. ... ..+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg--~~--~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG--KP--LAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC--CE--EEE-EEEEEESCCCEESTT-SEEEEEECCCC---
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CC--CCc-cCCCceeccEEEECC-CEEEEEEecCcccc
Confidence 454578899999999999887654 36999999832 22 211 111222357899999 99998887652
Q ss_pred ---------eEEEEEECCCceE--EEEec-CCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCC--e-eeeee
Q psy10566 371 ---------HELWVWNIETELL--RVKLN-HSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQ--V-LDSWE 430 (604)
Q Consensus 371 ---------~~i~vwd~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~--~-~~~~~ 430 (604)
..|++|++.++.. ...+. ..+...+..+.|+|||++++..+.++ .|++||+++. . ...+.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 2499999987652 22222 12233588999999999998887654 8999999543 2 33343
Q ss_pred ce--eEEEEEEcCCCCEEEEEeCC----CeEEEEEcCCC--cccccccC-CCCeeEEEECCCCCEEEEEecCCeEEEEec
Q psy10566 431 GV--RVNCLWCRSDGKSVLAADTH----HRIRTYNFEHL--TDSNLLQE-DHPVMSFTIDATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 431 ~~--~v~~l~~s~~g~~l~~~~~d----g~I~i~d~~~~--~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~ 501 (604)
.. .+... ++++|+.++..+.+ +.|.+||+.+. ....++.+ ...+..++++ ++.++++...++..++|.+
T Consensus 314 ~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 314 PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 22 23333 34889988887764 45999998874 23333333 3345667777 5667778888888777655
Q ss_pred C-CCceeeEeeccccceEEEEeeeCCCCCcEEE-EEe---CCCcEEEEeCCCCcceEEee
Q psy10566 502 R-DRILLRKFQGVTQGQFTIHSCFGGANQDFVA-SGS---EDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 502 ~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-sgs---~dg~I~iwd~~~~~~~~~l~ 556 (604)
. ++...+.+..+... .+....++++++.++ +.+ ..++|++||+.+++ ...+.
T Consensus 392 ~~~g~~~~~l~~~~~~--~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~ 448 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIG--SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWE 448 (741)
T ss_dssp ETTSCEEEECBCSSSC--EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECS
T ss_pred eCCCCceeeccCCCCe--EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEe
Confidence 4 45555555432111 344455567876555 332 34789999999876 33443
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=1.2e-10 Score=114.35 Aligned_cols=226 Identities=12% Similarity=0.097 Sum_probs=152.0
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCe
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
+..-..+..|+|++..|+.+...+ +.|+.||..++.... +. ....+.+++++++|+++++ . ++.|.+||.+...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~-~~i~~~d~~~~~~~~-~~--~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPA-KKVCRWDSFTKQVQR-VT--MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTT-TEEEEEETTTCCEEE-EE--CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred CCccccCCeEECCCCEEEEEECCC-CEEEEEECCCCcEEE-Ee--CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 344556889999766666555443 389999999876533 22 2367999999999995554 3 6789999986544
Q ss_pred eeeee-------ceeEEEEEEcCCCCEEEEEeCC---------CeEEEEEcCC-CcccccccCCCCeeEEEECCCCCEEE
Q psy10566 426 LDSWE-------GVRVNCLWCRSDGKSVLAADTH---------HRIRTYNFEH-LTDSNLLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 426 ~~~~~-------~~~v~~l~~s~~g~~l~~~~~d---------g~I~i~d~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~ 488 (604)
+..+. ...+++++++++|+.+++.... ..-.+|.+.. +..............++|+|+++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEE
Confidence 43322 2368899999999966654321 2234444432 22222333344567899999998775
Q ss_pred EE-ecCCeEEEEec--CCCcee--eEe---eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCC
Q psy10566 489 LN-VSTQGVHLWDL--RDRILL--RKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTR 560 (604)
Q Consensus 489 ~~-~~dg~I~lwd~--~~~~~~--~~~---~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~ 560 (604)
++ +.++.|.+||+ .++... +.+ ..... ....+...++|++.++...++.|.+||..+++.+..+..+..
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~---~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ---IPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC---EEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC---CCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC
Confidence 54 55789999997 455432 112 21112 223344568898888888888999999999999999988878
Q ss_pred CeeEEEEc-CCCCcEEEEEeC
Q psy10566 561 TVSCVAWN-PVYHQMIASVSD 580 (604)
Q Consensus 561 ~V~~v~~s-p~~~~~l~s~s~ 580 (604)
.+++++|. |++..++++...
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEBC
T ss_pred CceEEEEeCCCCCEEEEEcCC
Confidence 89999998 775556666654
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.46 E-value=4.2e-11 Score=120.02 Aligned_cols=264 Identities=14% Similarity=0.069 Sum_probs=175.6
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l 353 (604)
.+.+..+..-..+ . +++||||+++++++ .++.|.+||.. +.+....+.-. ......+
T Consensus 69 ~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~----t~~v~~~I~v~~g~r~~~g~~P~~~ 142 (386)
T 3sjl_D 69 GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV----TLLPTADIELPDAPRFLVGTYPWMT 142 (386)
T ss_dssp TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC----CCeEEEEEECCCccccccCCCCceE
Confidence 4555555544445 4 99999999887765 36789999998 44444444321 1246679
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeeeeec
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDSWEG 431 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~ 431 (604)
+|+|||++++++.......|.++|+.+++.+..+... + . ...+....+.+++.+.||.+.+.++. ++.......
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~ 218 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 218 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecc
Confidence 9999999999886531138999999999998888632 1 1 22333345677788888988888884 443221111
Q ss_pred e------eE-EEEEE-cCCCCEEEEEeCCCeEEEEEcCCCccc--cccc-----------CCCCeeEEEECCCCCEEEEE
Q psy10566 432 V------RV-NCLWC-RSDGKSVLAADTHHRIRTYNFEHLTDS--NLLQ-----------EDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 432 ~------~v-~~l~~-s~~g~~l~~~~~dg~I~i~d~~~~~~~--~~~~-----------~~~~i~~~~~s~~~~~l~~~ 490 (604)
. .+ ....| .++|+.++ .+.+|.|++.|+.+.... ..+. .......++++++++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~ 297 (386)
T 3sjl_D 219 VFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLL 297 (386)
T ss_dssp CCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred eeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEE
Confidence 0 11 12344 35665444 666899999999765321 1110 12234457889999999887
Q ss_pred ec----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEeeCC
Q psy10566 491 VS----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 491 ~~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l~~h 558 (604)
.. .++|.++|+.+++.++++.... ....+.++++++ +|++.. .++.|.++|..+++.+.++..-
T Consensus 298 ~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 298 VDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred eccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 64 2579999999999998887433 233455678986 666654 5899999999999999988743
Q ss_pred CCCeeEEEEcCC
Q psy10566 559 TRTVSCVAWNPV 570 (604)
Q Consensus 559 ~~~V~~v~~sp~ 570 (604)
+..+.+.+++|
T Consensus 374 -~~p~~l~~s~d 384 (386)
T 3sjl_D 374 -GHGPQVITTAD 384 (386)
T ss_dssp -CSSCCEEEECC
T ss_pred -CCCceeEECCc
Confidence 33466677765
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.44 E-value=4.3e-11 Score=122.10 Aligned_cols=274 Identities=10% Similarity=0.010 Sum_probs=176.9
Q ss_pred CCCCeEEEEEC-C----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--------CceEEEEEE
Q psy10566 311 PDGLKLATGSK-D----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--------DCHELWVWN 377 (604)
Q Consensus 311 pdg~~lasgs~-d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--------~~~~i~vwd 377 (604)
++++.+++... + +.|.++|.. +.+.+..+..-..+ .++++||+++++++... +...|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~----t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS----TGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT----TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC----CCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 34554444433 2 689999988 55666666654455 89999999999888631 123799999
Q ss_pred CCCceEEEEecCC-C-----CCCeEEEEEecCCCEEEEEec--CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCC-CEEE
Q psy10566 378 IETELLRVKLNHS-P-----EDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDG-KSVL 447 (604)
Q Consensus 378 ~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g-~~l~ 447 (604)
..+++.+..+..+ . ......+.|+|||++++++.. ++.|.+.|+. ++.+..+.-... ....|++ ..++
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v 233 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFY 233 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEE
Confidence 9999988776532 0 123567899999999999874 5789999995 555555543211 2223332 4455
Q ss_pred EEeCCCeEEEEEcCCCcccc----ccc-CCCC-eeEEEECCCCCEEEEEecCCeEEEEecCCCcee--eEeecc-----c
Q psy10566 448 AADTHHRIRTYNFEHLTDSN----LLQ-EDHP-VMSFTIDATDRLALLNVSTQGVHLWDLRDRILL--RKFQGV-----T 514 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~----~~~-~~~~-i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~--~~~~~~-----~ 514 (604)
+.+.||++.+.+..+.+... .+. ...+ ...+.+.+++..++.....+.|.+.|....... ..+... .
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 56666766666664333221 111 1112 124567899988888888899999998765321 111100 0
Q ss_pred cceEE--EEeeeCCCCCcEEEEEeC----------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CC
Q psy10566 515 QGQFT--IHSCFGGANQDFVASGSE----------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DD 581 (604)
Q Consensus 515 ~~~~~--i~~~~~~~~~~~l~sgs~----------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~D 581 (604)
..... ...+.++++++.+++... ++.|.++|..+.+.+.++.... ...+++|+|++..+++++. .+
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTT
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCC
Confidence 00000 001233577776666532 3579999999999999886432 4799999999432666666 69
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
+.|.++|+.+.+
T Consensus 393 ~~VsVID~~t~k 404 (426)
T 3c75_H 393 QTLHIYDAATGE 404 (426)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCC
Confidence 999999999876
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.43 E-value=1e-10 Score=120.19 Aligned_cols=233 Identities=7% Similarity=-0.024 Sum_probs=162.1
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEcCC-C
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDIEG-Q 424 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~-~ 424 (604)
.....++|+|+++.+++...++ .|++||..++........ . .... ++|+++++.++++..++ .|..++..+ .
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~--~I~~id~~~g~~~~~~~~-~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDP--RVRLISVDDNKVTTVHPG-F-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTT--EEEEEETTTTEEEEEEET-C-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCC--cEEEEECCCCEEEEeecc-C-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 3578999999998666655555 899999998876655542 2 2234 99999999999988866 788888853 2
Q ss_pred eeeee------eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc----cc-CCCC--eeEEEECCC-CCEEEEE
Q psy10566 425 VLDSW------EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL----LQ-EDHP--VMSFTIDAT-DRLALLN 490 (604)
Q Consensus 425 ~~~~~------~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~----~~-~~~~--i~~~~~s~~-~~~l~~~ 490 (604)
..... ....+.+++++|++..++++..++.|+.||..+...... .. .... ...++++|+ +.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 22333 234678899999666666678889999999987653322 11 1111 239999995 5555555
Q ss_pred ecCCeEEEEecCCCceeeEeeccc---c---------ceEEEEeeeCCCCCcEEEEEe-CCCcEEEEeCCCCcceEEeeC
Q psy10566 491 VSTQGVHLWDLRDRILLRKFQGVT---Q---------GQFTIHSCFGGANQDFVASGS-EDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 491 ~~dg~I~lwd~~~~~~~~~~~~~~---~---------~~~~i~~~~~~~~~~~l~sgs-~dg~I~iwd~~~~~~~~~l~~ 557 (604)
..++.|+.|+.... +..+.++. . .......++++++|+++++-+ .++.|+.|+..++. +.++.+
T Consensus 286 ~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g 362 (409)
T 3hrp_A 286 QNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAG 362 (409)
T ss_dssp TTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEE
T ss_pred CCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeC
Confidence 66789999997643 33333322 0 001123345578999888887 89999999987776 444444
Q ss_pred C---------------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 558 H---------------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 558 h---------------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+ -.....++++|+ +.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 4 245889999999 888988888999988765
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=5.8e-10 Score=111.08 Aligned_cols=223 Identities=12% Similarity=0.039 Sum_probs=146.5
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW 429 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 429 (604)
..+.+|+|++..++.++..+ +.|+.||..++..... . ....+.+++|+++|+++++. . ..|.+||.++..+..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~-~~i~~~d~~~~~~~~~-~--~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE-RELHELHLASGRKTVH-A--LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG-TEEEEEETTTTEEEEE-E--CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCC-CEEEEEECCCCcEEEE-E--CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE
Confidence 45678999866555555433 2899999988865432 2 23579999999999877654 3 4499999854333322
Q ss_pred e-------ceeEEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-cCCe
Q psy10566 430 E-------GVRVNCLWCRSDGKSVLAADT------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV-STQG 495 (604)
Q Consensus 430 ~-------~~~v~~l~~s~~g~~l~~~~~------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~ 495 (604)
. ...+.+++++++|+.+++... .+.|..++ +++.............++|+|+++.++++. .++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 1 136889999999997665442 24566666 333333323334567899999998776654 5688
Q ss_pred EEEEecC--CC-cee--eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEc-C
Q psy10566 496 VHLWDLR--DR-ILL--RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN-P 569 (604)
Q Consensus 496 I~lwd~~--~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~s-p 569 (604)
|.+||+. ++ ... ..+............+...++|++.++...++.|.+||. +++.+..+..+...+++++|+ |
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecC
Confidence 9999986 55 321 122111100012233455688888777777789999998 677778887777789999998 8
Q ss_pred CCCcEEEEEeCC
Q psy10566 570 VYHQMIASVSDD 581 (604)
Q Consensus 570 ~~~~~l~s~s~D 581 (604)
+++.++++...+
T Consensus 282 d~~~L~vt~~~~ 293 (326)
T 2ghs_A 282 DASRLLVTSARE 293 (326)
T ss_dssp TSCEEEEEEBCT
T ss_pred CCCEEEEEecCC
Confidence 844555555554
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=9.6e-10 Score=107.56 Aligned_cols=237 Identities=7% Similarity=-0.055 Sum_probs=168.0
Q ss_pred ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q psy10566 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG 423 (604)
Q Consensus 344 ~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 423 (604)
......+.++++.++|...++...++ .|.+||.. ++............+.++++.+++..+++...++.|..||.++
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~--~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g 92 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKAN--KISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKG 92 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTT--EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCC--eEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCC
Confidence 33456789999999998777766666 79999988 5544322222335689999999999888777788999999886
Q ss_pred Ceeeeee----ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-cc-CCCCeeEEEECCCCCEEEEEecCCeEE
Q psy10566 424 QVLDSWE----GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQ-EDHPVMSFTIDATDRLALLNVSTQGVH 497 (604)
Q Consensus 424 ~~~~~~~----~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~ 497 (604)
+.. .+. ...+..+++.++|+.+++...++.|..||.. +..... .. ....+..++++++++..++...++.|.
T Consensus 93 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 543 332 2468899999999988777778899999987 433222 12 345688999999999666666678999
Q ss_pred EEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE-eeCCCCCeeEEEEcCCCCcEEE
Q psy10566 498 LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT-LSGHTRTVSCVAWNPVYHQMIA 576 (604)
Q Consensus 498 lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~-l~~h~~~V~~v~~sp~~~~~l~ 576 (604)
.||. +++... +...... .....+...++|++.++....+.|.+||. +++.... +..+...+.+++++++ +.+++
T Consensus 171 ~~~~-~g~~~~-~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v 245 (300)
T 2qc5_A 171 RITN-TGKLEE-YPLPTNA-AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKN-SEIWF 245 (300)
T ss_dssp EECT-TCCEEE-EECSSTT-CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCEEE
T ss_pred EECC-CCcEEE-eeCCCCC-CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCC-CCEEE
Confidence 9998 554433 3221111 12233444678887777767788999998 4554332 3345567899999999 67777
Q ss_pred EEeCCCcEEEECCC
Q psy10566 577 SVSDDCTVRIWGPH 590 (604)
Q Consensus 577 s~s~Dg~I~iW~~~ 590 (604)
+...++.|..|+..
T Consensus 246 ~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 246 TEWGANQIGRITND 259 (300)
T ss_dssp EETTTTEEEEECTT
T ss_pred eccCCCeEEEECCC
Confidence 77677899999984
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=1.4e-10 Score=114.52 Aligned_cols=232 Identities=13% Similarity=0.105 Sum_probs=151.6
Q ss_pred EeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q psy10566 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI 421 (604)
Q Consensus 342 ~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 421 (604)
.+..........+|+|+++.|+.++..+ +.|..|+.. +... .+. .....+..++++++|+.+++...++.|..|+.
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~-~~i~~~~~~-g~~~-~~~-~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVG-RRVLGWRED-GTVD-VLL-DATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTT-TEEEEEETT-SCEE-EEE-ESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCC-CEEEEEeCC-CCEE-EEe-CCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3334455677899999999555555433 289999984 4432 222 23456899999999997776666789999998
Q ss_pred CCCeeeee---ec---eeEEEEEEcCCCCEEEE----EeC-------------CCeEEEEEcCCCcccccccCCCCeeEE
Q psy10566 422 EGQVLDSW---EG---VRVNCLWCRSDGKSVLA----ADT-------------HHRIRTYNFEHLTDSNLLQEDHPVMSF 478 (604)
Q Consensus 422 ~~~~~~~~---~~---~~v~~l~~s~~g~~l~~----~~~-------------dg~I~i~d~~~~~~~~~~~~~~~i~~~ 478 (604)
+++..... .+ ..+.++++.++|+..++ +.. .+.|..||..+++..... .......+
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl 193 (305)
T 3dr2_A 115 DGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGL 193 (305)
T ss_dssp TSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEE
T ss_pred CCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcce
Confidence 76543222 11 13678999999997775 322 256788887666554444 44556789
Q ss_pred EECCCCCEEEEEecC------CeEEEEecCCCcee--eEeec-cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 479 TIDATDRLALLNVST------QGVHLWDLRDRILL--RKFQG-VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 479 ~~s~~~~~l~~~~~d------g~I~lwd~~~~~~~--~~~~~-~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
+|+|+++.++++... +.|++||+..+... ..+.. .... ...+...++|++. +++.+ .|.+|+. .+
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~---pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g 267 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL---PDGFCVDRGGWLW-SSSGT-GVCVFDS-DG 267 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC---CCSEEECTTSCEE-ECCSS-EEEEECT-TS
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC---CCeEEECCCCCEE-EecCC-cEEEECC-CC
Confidence 999999988887665 68999998765411 11111 0110 1123345788844 44444 4999998 57
Q ss_pred cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 550 ~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
+.+..+..+. .+.+++|+|+ +..|+.++.++..++
T Consensus 268 ~~~~~~~~~~-~~~~~~f~~d-~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 268 QLLGHIPTPG-TASNCTFDQA-QQRLFITGGPCLWML 302 (305)
T ss_dssp CEEEEEECSS-CCCEEEECTT-SCEEEEEETTEEEEE
T ss_pred CEEEEEECCC-ceeEEEEeCC-CCEEEEEcCCeEEEE
Confidence 7777777665 5899999988 566666666654443
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.37 E-value=2.4e-10 Score=117.45 Aligned_cols=237 Identities=11% Similarity=0.063 Sum_probs=158.8
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
...+.++|+++|+++++...++.|++||.+ ... ....... ..... ++|+|+++.|+++..++...|++|+..++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~--~g~--~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVD--DNK--VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETT--TTE--EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECC--CCE--EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 468899999999988887778999999987 222 2222222 23334 99999999998888765337999998776
Q ss_pred eEEEEe---cCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-----ce-eE--E-EEEEcCC-CCEEEE
Q psy10566 382 LLRVKL---NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-----GV-RV--N-CLWCRSD-GKSVLA 448 (604)
Q Consensus 382 ~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~-~v--~-~l~~s~~-g~~l~~ 448 (604)
.....+ .......+.+++++|++..|+++..++.|+.||.++.....+. +. .. . .++++|+ +..+++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 543333 1113456788999996556666777889999999755444331 11 11 2 8999995 555555
Q ss_pred EeCCCeEEEEEcCCCcccccccC---------------CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec
Q psy10566 449 ADTHHRIRTYNFEHLTDSNLLQE---------------DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 449 ~~~dg~I~i~d~~~~~~~~~~~~---------------~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~ 512 (604)
-..++.|+.|+.... ....... -.....++++++|+++++-. .++.|+.||+.++.. .++.+
T Consensus 285 d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 566789999997653 1111111 23478999999999777777 789999999877753 44443
Q ss_pred ccc------------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeC
Q psy10566 513 VTQ------------GQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546 (604)
Q Consensus 513 ~~~------------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~ 546 (604)
+.. .......++++++|.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 310 0011233444577777777777888877764
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=1.2e-10 Score=118.83 Aligned_cols=250 Identities=13% Similarity=0.036 Sum_probs=168.7
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l 353 (604)
.+.+..+..-..+ .++++|||++|+++. .++.|.++|.. +.+.+..+.-. ......+
T Consensus 109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~----t~~vv~~I~v~g~~r~~~g~~P~~~ 182 (426)
T 3c75_H 109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV----TFLPIADIELPDAPRFLVGTYQWMN 182 (426)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETTCCCCCBSCCGGGS
T ss_pred CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC----CCcEEEEEECCCccccccCCCcceE
Confidence 4455555544445 799999999887775 36789999988 44444444311 2345678
Q ss_pred EECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-CCeeee---
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIE-GQVLDS--- 428 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~-~~~~~~--- 428 (604)
+|+|||++++++.......|.+.|+.+++.+..+.... +....|++ ..+++.+.||.+.+.+.. ++....
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~ 257 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-----CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTE 257 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-----EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECC
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeee
Confidence 99999999999875322389999999999888876421 12333433 455666677777766663 222211
Q ss_pred -ee--cee-EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-----c-----c---CCCCeeEEEECCCCCEEEEEe
Q psy10566 429 -WE--GVR-VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-----L-----Q---EDHPVMSFTIDATDRLALLNV 491 (604)
Q Consensus 429 -~~--~~~-v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-----~-----~---~~~~i~~~~~s~~~~~l~~~~ 491 (604)
+. ..+ ...+.+.+++..++..+..+.+.+.|......... . . .......++++|+++.+++..
T Consensus 258 ~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 258 VFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp CCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred eeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 10 001 12346788999888888899999999865431110 0 0 012223478999999888775
Q ss_pred c----------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEEe
Q psy10566 492 S----------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 492 ~----------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~l 555 (604)
. .+.|.++|..+.+.+.++..... ...+.++++|+ ++++.. .++.|.++|..+++.+.++
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~----P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETGERINKIELGHE----IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cccccccccCCCCEEEEEECCCCeEEEEEECCCC----cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 3 35799999999999998864331 23345579998 888887 5899999999999999887
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.36 E-value=6.3e-10 Score=109.27 Aligned_cols=229 Identities=15% Similarity=0.102 Sum_probs=151.5
Q ss_pred cccCCCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 297 LNDHCDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 297 l~~H~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
+..+..---+..|+|++ .++++...++.|..||... ... ..+. ....+.+++++|+|+++++ .. + .|.+
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~--~~~---~~~~-~~~~~~~i~~~~dG~l~v~-~~-~--~l~~ 77 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFT--KQV---QRVT-MDAPVSSVALRQSGGYVAT-IG-T--KFCA 77 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTT--CCE---EEEE-CSSCEEEEEEBTTSSEEEE-ET-T--EEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCC--CcE---EEEe-CCCceEEEEECCCCCEEEE-EC-C--eEEE
Confidence 33444556688999964 4666666788999999872 222 2222 3567999999999995544 43 3 5999
Q ss_pred EECCCceEEEEecCC---CCCCeEEEEEecCCCEEEEEec-----------CCeEEEEEcCCCeeeeeece-eEEEEEEc
Q psy10566 376 WNIETELLRVKLNHS---PEDSLTSCSWNRDGTKFVCGGI-----------RGQFYQCDIEGQVLDSWEGV-RVNCLWCR 440 (604)
Q Consensus 376 wd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~-~v~~l~~s 440 (604)
||..+++........ ....+..++++|+|+.+++... .+.|+.++.+++........ ..+.++++
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~s 157 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWS 157 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEEC
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEc
Confidence 999888754433211 2235788999999997665432 23455555556544433332 56889999
Q ss_pred CCCCEEEEE-eCCCeEEEEEcC--CCccc--ccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 441 SDGKSVLAA-DTHHRIRTYNFE--HLTDS--NLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 441 ~~g~~l~~~-~~dg~I~i~d~~--~~~~~--~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
|+++.++.+ +.++.|.+||+. ++... ..+ .....+..++++++|++.++....+.|..||..+++.+..+.
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 999977554 557899999974 33221 111 123457889999999888777778899999999999888887
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
.+...... +++..|+++.|+.++.
T Consensus 238 ~p~~~~t~--~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 238 LPVDKTTS--CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CSSSBEEE--EEEESGGGCEEEEEEB
T ss_pred CCCCCceE--EEEeCCCCCEEEEEcC
Confidence 66443322 2343477766655543
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=8.2e-11 Score=129.93 Aligned_cols=242 Identities=15% Similarity=0.205 Sum_probs=154.0
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEE-----CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc--
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGS-----KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC-- 370 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs-----~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~-- 370 (604)
.+|...+..++|||||++||.+. ...+|++||+.++ .... ..+.+ .....++|+ |++.|+.++.+..
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg--~~~~-~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK--QPLE-TPLKD--VKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC--SEEE-EEEEE--EESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC--CCCc-cccCC--ceeccEEEe-CCCEEEEEEecCccc
Confidence 34667899999999999988542 3357999999832 2211 12221 113567899 9999999887741
Q ss_pred ---------eEEEEEECCCceE--EEEecC-C-CCCCeEEEEEecCCCEEEEEec----CCeEEEEEcCCC--eeeeeec
Q psy10566 371 ---------HELWVWNIETELL--RVKLNH-S-PEDSLTSCSWNRDGTKFVCGGI----RGQFYQCDIEGQ--VLDSWEG 431 (604)
Q Consensus 371 ---------~~i~vwd~~~~~~--~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~ 431 (604)
..|++|++.++.. ...+.. . +...+.++.|+|||++++.... ...|+++|+++. ....+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 2599999987642 222221 2 2345788999999998866543 248999998532 3333333
Q ss_pred e--eEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEecCC---eEEEE
Q psy10566 432 V--RVNCLWCRSDGKSVLAADT----HHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVSTQ---GVHLW 499 (604)
Q Consensus 432 ~--~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~I~lw 499 (604)
. ..... ++++|..++..+. .+.|..+|+.+... ..+..+...+. .++++++.|+....++ .|++|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 2 22222 5666766665544 26799999987654 34455555554 8889999888776644 68999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC----CcEEEEeCCCCcc
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED----GKVYIWHVKRELP 551 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d----g~I~iwd~~~~~~ 551 (604)
|+..+ ..+.+...... .+....++++++.++....+ +.|+.||+.+++.
T Consensus 356 d~~g~-~~~~l~~p~~~--~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGK-RVREVALPGLG--SVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSC-EEEEECCSSSS--EEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCC-eeEEeecCCCc--eEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 98754 33444322111 23334455677666555444 8899999987763
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1e-10 Score=117.51 Aligned_cols=266 Identities=7% Similarity=-0.048 Sum_probs=167.8
Q ss_pred CcEEEEEEcCCCCeEEEEE--CCCeEEEEEeCCCCceeEee----EEeccCCCCeeEEEECCCCCeEEEEeC-----CCc
Q psy10566 302 DEVWFCKFSPDGLKLATGS--KDTTVIIWDVDPVTFTCQHR----KTLEGHTLGVAYLAWSPDSSHLLVVGP-----EDC 370 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs--~dg~i~iwd~~~~~~~~~~~----~~l~~h~~~V~~l~~spd~~~l~s~~~-----d~~ 370 (604)
..+..++++|+|+++++.. .++.++||.++ ++..... ....+|-..+..++++++++.+++-.. +.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~- 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP- 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC-
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC-
Confidence 6799999999999888864 23446777775 2221110 011234568999999999876655433 34
Q ss_pred eEEEEEECCCceEEEEecCC-----CCCCeEEEEEecCCCEE-EEEe---cCCeEEEEEcC-CCeeeeeecee---EEEE
Q psy10566 371 HELWVWNIETELLRVKLNHS-----PEDSLTSCSWNRDGTKF-VCGG---IRGQFYQCDIE-GQVLDSWEGVR---VNCL 437 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l-~s~~---~dg~i~iwd~~-~~~~~~~~~~~---v~~l 437 (604)
.|.+||+.+++....+... +...+..+++++++..+ ++.. .++.|.+||+. ++..+...++. ....
T Consensus 94 -~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 -KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp -EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred -eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 7999999999866655421 22356899999865554 4444 57899999995 55554443320 0013
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCC-eEEEEecC---CCc-----eee
Q psy10566 438 WCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQ-GVHLWDLR---DRI-----LLR 508 (604)
Q Consensus 438 ~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~I~lwd~~---~~~-----~~~ 508 (604)
.+..+|..+.+.+.++.+..|. ..+..++++|+++.++++...+ .++.++.. .+. ...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp CCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred ceeECCEEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 3444566666666777665553 2367899999999888887765 56555532 111 001
Q ss_pred --EeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEE
Q psy10566 509 --KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVR 585 (604)
Q Consensus 509 --~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~ 585 (604)
...++... ...+.++++|+++++...++.|.+||..+++....... +...+.+++|.++ +.++++.+..+.+.
T Consensus 240 ~~~~~g~~g~---pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 240 KIERYSEKPI---CDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHHSA 315 (343)
T ss_dssp TCEEEEECCS---CSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEECCGGGSG
T ss_pred ceEecccCCC---CceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeCcccccc
Confidence 11111111 11134467899999998999999999866764333332 2456899999998 77888877555554
Q ss_pred EEC
Q psy10566 586 IWG 588 (604)
Q Consensus 586 iW~ 588 (604)
+|.
T Consensus 316 ~f~ 318 (343)
T 2qe8_A 316 PLN 318 (343)
T ss_dssp GGB
T ss_pred ccc
Confidence 443
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.30 E-value=3.3e-10 Score=125.08 Aligned_cols=238 Identities=11% Similarity=0.066 Sum_probs=157.2
Q ss_pred CCCCeeEEEECCCCCeEEEEeCC-C--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--------
Q psy10566 346 HTLGVAYLAWSPDSSHLLVVGPE-D--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-------- 414 (604)
Q Consensus 346 h~~~V~~l~~spd~~~l~s~~~d-~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-------- 414 (604)
|...+..++|||||++|+.+... | ...|++||+.+++........ .....++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 55578889999999998865432 2 148999999999865432211 113567899 999999988774
Q ss_pred -----eEEEEEcCC-----Ceeeeeec-e--eEEEEEEcCCCCEEEEEeC----CCeEEEEEcCCC--cccccccCCCCe
Q psy10566 415 -----QFYQCDIEG-----QVLDSWEG-V--RVNCLWCRSDGKSVLAADT----HHRIRTYNFEHL--TDSNLLQEDHPV 475 (604)
Q Consensus 415 -----~i~iwd~~~-----~~~~~~~~-~--~v~~l~~s~~g~~l~~~~~----dg~I~i~d~~~~--~~~~~~~~~~~i 475 (604)
.|++|++.. ..+..... + ....+.++|||++++.... ...|+++|+.+. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 499999842 12333333 2 3678899999998866543 248999999776 333344444444
Q ss_pred eEEEECCCCCEEEEEec----CCeEEEEecCCCce--eeEeeccccceEEEEeeeCCCCCcEEEEEeC-CC--cEEEEeC
Q psy10566 476 MSFTIDATDRLALLNVS----TQGVHLWDLRDRIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSE-DG--KVYIWHV 546 (604)
Q Consensus 476 ~~~~~s~~~~~l~~~~~----dg~I~lwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~-dg--~I~iwd~ 546 (604)
... +++++..++..+. .+.|..+|+.++.. .+.+..+..... .+++++++|+.... ++ .|++||+
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-----~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-----TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-----EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-----EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 444 6666766665544 25799999988654 345555555432 23467777766654 44 6899998
Q ss_pred CCCcceEEee-CCCCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCCCCC
Q psy10566 547 KRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPHLNT 593 (604)
Q Consensus 547 ~~~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~~~~ 593 (604)
..+. ...+. .+.+.+..+.++|++..++++.+.. ++|..||+.+++
T Consensus 358 ~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 358 EGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 8543 44443 3456678888898855555555432 789999997764
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=5.2e-10 Score=110.32 Aligned_cols=237 Identities=13% Similarity=0.041 Sum_probs=154.1
Q ss_pred cceeecccCCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc
Q psy10566 292 ETTQVLNDHCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC 370 (604)
Q Consensus 292 ~~~~~l~~H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~ 370 (604)
..+..+..+........|+|+|+ +++++..++.|..|+.. +. ...+..+...+..++++++|+.+++...++
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~---g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~- 107 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED---GT---VDVLLDATAFTNGNAVDAQQRLVHCEHGRR- 107 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT---SC---EEEEEESCSCEEEEEECTTSCEEEEETTTT-
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC---CC---EEEEeCCCCccceeeECCCCCEEEEECCCC-
Confidence 34445555666788899999998 66777778899999864 12 233444566789999999998665544445
Q ss_pred eEEEEEECCCceEEEEecC---CCCCCeEEEEEecCCCEEEE----Eec-------------CCeEEEEEcC-CCeeeee
Q psy10566 371 HELWVWNIETELLRVKLNH---SPEDSLTSCSWNRDGTKFVC----GGI-------------RGQFYQCDIE-GQVLDSW 429 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s----~~~-------------dg~i~iwd~~-~~~~~~~ 429 (604)
.|..|+.. +........ .....+..+++.++|+.+++ |.. .+.|+.+|.. ++.....
T Consensus 108 -~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 108 -AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp -EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred -EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 79999986 543322211 11234678999999998886 332 2567788874 4433322
Q ss_pred eceeEEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCccc--ccc--cCCCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 430 EGVRVNCLWCRSDGKSVLAADTH------HRIRTYNFEHLTDS--NLL--QEDHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 430 ~~~~v~~l~~s~~g~~l~~~~~d------g~I~i~d~~~~~~~--~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
.......++|+|+++.++++... +.|.+|++...... ..+ ........++++++|+ +.+++. +.|.+|
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~-~gv~~~ 263 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSG-TGVCVF 263 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCS-SEEEEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecC-CcEEEE
Confidence 22356789999999988887765 78999998753210 111 1233456789999999 444544 459999
Q ss_pred ecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEe
Q psy10566 500 DLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 500 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd 545 (604)
|. +++.+..+..... +..+.++++++.|+.++.++ ++.++
T Consensus 264 ~~-~g~~~~~~~~~~~----~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPGT----ASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CT-TSCEEEEEECSSC----CCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CC-CCCEEEEEECCCc----eeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 98 5666666665432 22233348888888877664 44333
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.28 E-value=4.8e-09 Score=104.42 Aligned_cols=220 Identities=12% Similarity=0.060 Sum_probs=144.8
Q ss_pred cEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 303 EVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 303 ~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
-..+.+|+|++. ++++...++.|..||.. ++... .+. ....+.+++|+|+|+++++. .+ .|.+||..++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~--~~~~~---~~~-~~~~v~~i~~~~dg~l~v~~-~~---gl~~~d~~~g 119 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLA--SGRKT---VHA-LPFMGSALAKISDSKQLIAS-DD---GLFLRDTATG 119 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETT--TTEEE---EEE-CSSCEEEEEEEETTEEEEEE-TT---EEEEEETTTC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECC--CCcEE---EEE-CCCcceEEEEeCCCeEEEEE-CC---CEEEEECCCC
Confidence 456789999754 56666678899999987 22221 222 34579999999999877654 33 4999999888
Q ss_pred eEEEEecCC---CCCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCeeeeeec-eeEEEEEEcCCCCEEEEE-e
Q psy10566 382 LLRVKLNHS---PEDSLTSCSWNRDGTKFVCGGI------RGQFYQCDIEGQVLDSWEG-VRVNCLWCRSDGKSVLAA-D 450 (604)
Q Consensus 382 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~-~~v~~l~~s~~g~~l~~~-~ 450 (604)
+........ ....+.+++++|+|+.+++... .+.|..++ +++....... .....++++++++.++.+ +
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 754433211 1235889999999997665542 25677777 5543322222 246789999999877655 4
Q ss_pred CCCeEEEEEcC--CC-ccc--ccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEE
Q psy10566 451 THHRIRTYNFE--HL-TDS--NLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 451 ~dg~I~i~d~~--~~-~~~--~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
.++.|.+||+. ++ ... ..+ .....+..++++++|.+.++...++.|.+||. +++.+..+..+... +.
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~---~~ 274 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ---TT 274 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB---EE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC---cE
Confidence 56899999986 43 211 111 12345678999999987777767789999998 56666666654432 33
Q ss_pred eeeCC-CCCcEEEEEeC
Q psy10566 522 SCFGG-ANQDFVASGSE 537 (604)
Q Consensus 522 ~~~~~-~~~~~l~sgs~ 537 (604)
++.++ ++++.|+.++.
T Consensus 275 ~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEESTTSCEEEEEEB
T ss_pred EEEEecCCCCEEEEEec
Confidence 34443 77766655443
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.8e-10 Score=115.82 Aligned_cols=174 Identities=9% Similarity=0.058 Sum_probs=127.9
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCC-------ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEE
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVT-------FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~-------~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~v 375 (604)
.+..+++++...++++|+.++ +++|+++... ...+..... .+.. |+.++| |+++|+++ .++ .|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~--~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRN--ALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESS--EEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCC--cEEE
Confidence 688999999999999999875 6669876111 002222222 3556 999999 88999988 555 8999
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
||+.+........ .+...+.++.+.+. .+++++.||.+.+||+....... ....|+|++|+|+| ++.|..||++
T Consensus 111 ~dv~sl~~~~~~~-~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 111 LDLEELSEFRTVT-SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp EESSSTTCEEEEE-ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEEEETTSCE
T ss_pred EEchhhhccCccc-eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9987755333332 34566887777654 38999999999999996333222 33579999999999 6789999999
Q ss_pred EEEEcCCCcc--cccc----------cCCCCeeEEEECCCCCEEEEE
Q psy10566 456 RTYNFEHLTD--SNLL----------QEDHPVMSFTIDATDRLALLN 490 (604)
Q Consensus 456 ~i~d~~~~~~--~~~~----------~~~~~i~~~~~s~~~~~l~~~ 490 (604)
++|+...... ...+ .+...|.++.|.+++.++++=
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9998887663 2222 257889999999999988864
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.24 E-value=3.1e-10 Score=113.93 Aligned_cols=254 Identities=6% Similarity=-0.078 Sum_probs=165.2
Q ss_pred eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC--------CCceEEEEEECCCceEEEEecCCC----
Q psy10566 324 TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP--------EDCHELWVWNIETELLRVKLNHSP---- 391 (604)
Q Consensus 324 ~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~--------d~~~~i~vwd~~~~~~~~~~~~~~---- 391 (604)
+|.+.|.. +.+.+.++.....+ .+.++||+++++++.. .....|.+||..+++....+..+.
T Consensus 47 ~vsvID~~----t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAG----CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETT----TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred eEEEEECC----CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc
Confidence 88899988 55666777655555 7999999999998863 112389999999999988875320
Q ss_pred --CCCeEEEEEecCCCEEEEEec--CCeEEE--EEcCCCeeeeeeceeEEEEEEcCCC-CEEEEEeCCCeEEEEEcCC--
Q psy10566 392 --EDSLTSCSWNRDGTKFVCGGI--RGQFYQ--CDIEGQVLDSWEGVRVNCLWCRSDG-KSVLAADTHHRIRTYNFEH-- 462 (604)
Q Consensus 392 --~~~v~~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~v~~l~~s~~g-~~l~~~~~dg~I~i~d~~~-- 462 (604)
......++++|||++++++.. +..+.+ +|... +..+.-.. +..+.|++ ..+++.+.|+.+.+.|+.+
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~--~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSAS--CFHIHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSS--CCCCEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCC--ceEEccCCCeEEEEEcCCCCEEEEECcccc
Confidence 123568999999999999875 357888 88754 33322110 11123443 3445556777887888776
Q ss_pred ---Ccccc----ccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc--eeeEeeccc-----cceEE--EEeeeC
Q psy10566 463 ---LTDSN----LLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI--LLRKFQGVT-----QGQFT--IHSCFG 525 (604)
Q Consensus 463 ---~~~~~----~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~--~~~~~~~~~-----~~~~~--i~~~~~ 525 (604)
++... .+. ...+. . .+++..++..+. +.|.+.|..+.. .+..+.... ..... ...+.+
T Consensus 197 ~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred ccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 32221 111 22333 3 556666666666 899999986532 222222110 00000 000234
Q ss_pred CCCCcEEEEEeC---------CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEe-CCCcEEEECCCCCC
Q psy10566 526 GANQDFVASGSE---------DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVS-DDCTVRIWGPHLNT 593 (604)
Q Consensus 526 ~~~~~~l~sgs~---------dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s-~Dg~I~iW~~~~~~ 593 (604)
+++++.++.+.. ++.+.++|..+.+.+..+.... ...+++|+|++..+++++. .+++|.++|+.+.+
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 588887776533 2356699999999988887544 5899999999556788888 69999999998876
No 222
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.19 E-value=1.2e-09 Score=109.79 Aligned_cols=168 Identities=14% Similarity=0.097 Sum_probs=126.8
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcC------------CC--eeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE------------GQ--VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------------~~--~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
..+..+++++....+++|+.++.+ +|+++ -+ ...... . |..++| +++.++++ .++.|++|
T Consensus 38 ~~~nlLais~~~gll~a~~~~~l~-v~~~~~l~~~~~~~~~~~~~~~~~~lp-~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSKAV-VGELQLLRDHITSDSTPLTFKWEKEIP-D-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEE-EEEHHHHHHHHHSSSCCCCCSEEEECT-T-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCEEE-EEEhhHhhhhhccccccccceEEeeCC-C-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 368999999999999999998644 59862 11 122222 2 999999 99999998 88999999
Q ss_pred EcCCCcccc-cccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeC
Q psy10566 459 NFEHLTDSN-LLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 459 d~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
|+.+..... ...+..++.++.+.+. .+++++.||.|.+||+.++.... +. ..+++++|+|+| ++.|..
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~---~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LA---QNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EE---ESEEEEEECSSE--EEEEET
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----cc---CCceEEEEcCCc--eEEEEc
Confidence 998765433 2234566777776654 38888999999999999876643 22 246677888999 678999
Q ss_pred CCcEEEEeCCCCcc--eEEe------e---CCCCCeeEEEEcCCCCcEEEEE
Q psy10566 538 DGKVYIWHVKRELP--IATL------S---GHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 538 dg~I~iwd~~~~~~--~~~l------~---~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
||++++|+...+.. ..++ . +|...|.+|.|.++ ..++++-
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~-~~flv~y 231 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP-QDFLAVF 231 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS-SEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC-CeEEEEE
Confidence 99999999887775 5566 2 47889999999998 6777663
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.18 E-value=1.5e-09 Score=109.00 Aligned_cols=255 Identities=7% Similarity=-0.055 Sum_probs=165.8
Q ss_pred ccceeecccCCCcEEEEEEcCCCCeEEEEE----------CCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEE
Q psy10566 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGS----------KDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYL 353 (604)
Q Consensus 291 ~~~~~~l~~H~~~V~~v~fspdg~~lasgs----------~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l 353 (604)
.+.+.++.....+ .++|+|||++++++. .+++|.+||.. +.+.+.++.-. ......+
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~----T~~vv~~I~v~~~~~~~~g~~P~~i 129 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV----TFLPIADIELPDAPRFSVGPRVHII 129 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT----TCCEEEEEEETTSCSCCBSCCTTSE
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC----CCCEEEEEECCCccccccCCCcceE
Confidence 4556666555555 799999999888876 36889999998 55555665432 1246789
Q ss_pred EECCCCCeEEEEeCCCceEEEE--EECCCceEEEEecCCCCCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC-----Ce
Q psy10566 354 AWSPDSSHLLVVGPEDCHELWV--WNIETELLRVKLNHSPEDSLTSCSWNRDG-TKFVCGGIRGQFYQCDIEG-----QV 425 (604)
Q Consensus 354 ~~spd~~~l~s~~~d~~~~i~v--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~-----~~ 425 (604)
+++|||++++++.......+.+ +|..+ ...+..+ +. ..+.|++ ..+++.+.||.+.+.|++. ..
T Consensus 130 a~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~--~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 130 GNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA--SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp EECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS--SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred EEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC--Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 9999999999987532126888 99887 3333321 11 1234544 3455566788887777753 11
Q ss_pred ee-----ee--eceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--ccccc--------C---CCCeeEEEECCCCC
Q psy10566 426 LD-----SW--EGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLLQ--------E---DHPVMSFTIDATDR 485 (604)
Q Consensus 426 ~~-----~~--~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~~--------~---~~~i~~~~~s~~~~ 485 (604)
+. .+ ...+. . .+++..++..+. +.+.+.|..+... ...+. . ......++++|+++
T Consensus 202 v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp CCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred EEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 11 01 11122 3 666676666666 9999999865321 11110 0 11122378999999
Q ss_pred EEEEEec-C--------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCCCCcceEE
Q psy10566 486 LALLNVS-T--------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 486 ~l~~~~~-d--------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~~~~~~~~ 554 (604)
.++++.. . +.+.++|+.+.+.+.++..... ...+.++++|+ .+++.. .++.|.++|+.+++.+.+
T Consensus 277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~----p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 277 GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD----SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE----ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred EEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC----cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 9888654 2 3577999999999888864432 23345568887 556666 599999999999999999
Q ss_pred eeCCCCCeeEEEEcC
Q psy10566 555 LSGHTRTVSCVAWNP 569 (604)
Q Consensus 555 l~~h~~~V~~v~~sp 569 (604)
+..... ...+++.+
T Consensus 353 I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 353 VELDKG-PESLSVQN 366 (368)
T ss_dssp CCCCSC-CCEEECCC
T ss_pred EECCCC-CCEEEeec
Confidence 986544 46676654
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.10 E-value=4.4e-08 Score=99.48 Aligned_cols=261 Identities=8% Similarity=-0.009 Sum_probs=163.2
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-------CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-------TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-------~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~ 385 (604)
+..+++++.++.|..+|..++. ..-...+... ...+.+. ...++..+++++.++ .|..+|..+|+...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g--~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGK--EIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKA--QVYALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCC--EEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTS--EEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCc--eeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCC--EEEEEECCCCCEEE
Confidence 5567777888999999987322 2212222111 1223222 122455777778777 89999999998876
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece-eE------EEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV-RV------NCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~v------~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
....... ....... .+..+++++.++.+..+|. +|+.+...... .+ ..... .+..+++++.++.+..
T Consensus 128 ~~~~~~~-~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 128 QTKVAGE-ALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSA 202 (376)
T ss_dssp EEECSSC-CCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEE
T ss_pred EEeCCCc-eEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEE
Confidence 6553211 1111112 2457888899999999998 57766555432 11 11111 2456888888999999
Q ss_pred EEcCCCcccccccCCCCe-----eE---EEECC--CCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC
Q psy10566 458 YNFEHLTDSNLLQEDHPV-----MS---FTIDA--TDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA 527 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~i-----~~---~~~s~--~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 527 (604)
+|..+++.........+. .. +...| .+..+++++.++.+..+|..+++.+....... ...+ . .
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~---~--~ 275 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS--VNDF---I--V 275 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC--EEEE---E--E
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC--CCCc---e--E
Confidence 999887655443321110 00 00111 35678888889999999999998776554221 1111 1 2
Q ss_pred CCcEEEEEeCCCcEEEEeCCCCcceEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 528 NQDFVASGSEDGKVYIWHVKRELPIATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 528 ~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++..++.++.+|.|+.+|..+|+.+..... ....+...... +..|+.++.+|.|.++|..+++
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEECCCCc
Confidence 356788888999999999999998877652 22233333333 3567788889999999998876
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=1.3e-08 Score=111.61 Aligned_cols=259 Identities=12% Similarity=0.069 Sum_probs=164.2
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECC---CCCeEEEEeCC----CceEEEEEECCCceE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSP---DSSHLLVVGPE----DCHELWVWNIETELL 383 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~sp---d~~~l~s~~~d----~~~~i~vwd~~~~~~ 383 (604)
+..+++++.|+.|..+|..+ ++.+-.+.. +......+..+| ++ .+++++.. ..+.|+.||..+|+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~T----G~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKT----GQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp TTEEEEECTTSEEEEEETTT----CCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEccCCEEEEEECCC----CCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 55788888999999999983 333333322 111111111222 44 44444321 123899999999998
Q ss_pred EEEecCCCC------------------------------CCeEEEEEecCCCEEEEEecCCe------------------
Q psy10566 384 RVKLNHSPE------------------------------DSLTSCSWNRDGTKFVCGGIRGQ------------------ 415 (604)
Q Consensus 384 ~~~~~~~~~------------------------------~~v~~~~~~~~~~~l~s~~~dg~------------------ 415 (604)
+-.+..... .....++++|++..++.++.++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 776642110 01125788898899999888764
Q ss_pred -EEEEEc-CCCeeeeeec--e---------eEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCcccccccC--------
Q psy10566 416 -FYQCDI-EGQVLDSWEG--V---------RVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQE-------- 471 (604)
Q Consensus 416 -i~iwd~-~~~~~~~~~~--~---------~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~-------- 471 (604)
|..+|. +|+.+-.+.. + .........+|+ .++.++.+|.++++|..+++.......
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 899998 4777655542 1 111122223554 688899999999999988765421100
Q ss_pred --------------------------------CCCeeEEEECCCCCEEEEEec---------------------------
Q psy10566 472 --------------------------------DHPVMSFTIDATDRLALLNVS--------------------------- 492 (604)
Q Consensus 472 --------------------------------~~~i~~~~~s~~~~~l~~~~~--------------------------- 492 (604)
...-..++++|+...+++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 001123788888888887632
Q ss_pred ------------------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEE
Q psy10566 493 ------------------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIAT 554 (604)
Q Consensus 493 ------------------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~ 554 (604)
+|.|+.||+.+++.+-.+..+...... .....+.+++.|+.||.|+.||.++|+.+..
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g----~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGG----TLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCC----EEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCc----cceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 377999999999988777654321111 1124567899999999999999999999998
Q ss_pred eeCCCCC-eeEEEEcCCCCcEEEEEeC
Q psy10566 555 LSGHTRT-VSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 555 l~~h~~~-V~~v~~sp~~~~~l~s~s~ 580 (604)
+....+. ..-+.|..++..++++.+.
T Consensus 512 ~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 512 QPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred eeCCCCcccCceEEEECCEEEEEEEec
Confidence 8755332 2446777775556665543
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=1.2e-08 Score=111.85 Aligned_cols=271 Identities=12% Similarity=0.041 Sum_probs=173.9
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC-----------CeeEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL-----------GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~-----------~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+..+++++.++.|.-+|.. +++.+-.+..... ....+++ ++..+++++.++ .|..+|..+|
T Consensus 77 ~g~vyv~~~~~~v~AlD~~----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg--~l~alD~~tG 148 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTR----TGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDG--RLIALDAATG 148 (677)
T ss_dssp TTEEEEECGGGCEEEEETT----TTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTS--EEEEEETTTC
T ss_pred CCEEEEECCCCeEEEEECC----CCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCC--EEEEEECCCC
Confidence 4456666678888888887 3333333332211 0112222 456788888887 8999999999
Q ss_pred eEEEEecCC-CC---CCeEEEEEecCCCEEEEEec------CCeEEEEEc-CCCeeeeeecee-----------------
Q psy10566 382 LLRVKLNHS-PE---DSLTSCSWNRDGTKFVCGGI------RGQFYQCDI-EGQVLDSWEGVR----------------- 433 (604)
Q Consensus 382 ~~~~~~~~~-~~---~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~-~~~~~~~~~~~~----------------- 433 (604)
+.+..+... .. ..+.+.-.. .+..+++++. ++.|+.+|. +|+.+-.+....
T Consensus 149 ~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~ 227 (677)
T 1kb0_A 149 KEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAAR 227 (677)
T ss_dssp CEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred CEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccc
Confidence 988777643 10 111111111 2345555553 689999998 577765553210
Q ss_pred -----------------EEEEEEcCCCCEEEEEeCCC-------------------eEEEEEcCCCcccccccC------
Q psy10566 434 -----------------VNCLWCRSDGKSVLAADTHH-------------------RIRTYNFEHLTDSNLLQE------ 471 (604)
Q Consensus 434 -----------------v~~l~~s~~g~~l~~~~~dg-------------------~I~i~d~~~~~~~~~~~~------ 471 (604)
...+++++++..++.++.++ .|..+|..+++....+..
T Consensus 228 ~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 228 TWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp TSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred cccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 12467888899898887764 599999998876554332
Q ss_pred ----CCCeeEEEECCCC---CEEEEEecCCeEEEEecCCCceeeEeeccccc-e-------EEE----------------
Q psy10566 472 ----DHPVMSFTIDATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQG-Q-------FTI---------------- 520 (604)
Q Consensus 472 ----~~~i~~~~~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~-~-------~~i---------------- 520 (604)
......+....+| ..+++++.+|.++++|..+++.+..+...... . ..+
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSS
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECc
Confidence 1122233334467 67889999999999999999988665422100 0 000
Q ss_pred --------EeeeCCCCCcEEEEEeC-------------------------------------------CCcEEEEeCCCC
Q psy10566 521 --------HSCFGGANQDFVASGSE-------------------------------------------DGKVYIWHVKRE 549 (604)
Q Consensus 521 --------~~~~~~~~~~~l~sgs~-------------------------------------------dg~I~iwd~~~~ 549 (604)
....++|++.++++... .|.|..||..++
T Consensus 388 ~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG 467 (677)
T 1kb0_A 388 GPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ 467 (677)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT
T ss_pred CcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC
Confidence 01233567777776543 278999999999
Q ss_pred cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 550 ~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.+..+. +..++.+..+... +.+++.++.||.+++||..+++.
T Consensus 468 ~~~W~~~-~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 468 KAAWSVE-HVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEE-ESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEeecC-CCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCce
Confidence 9988876 3344555556666 56778889999999999998873
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.06 E-value=1.6e-08 Score=111.02 Aligned_cols=270 Identities=12% Similarity=0.019 Sum_probs=170.5
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC----------Ce-eEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL----------GV-AYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~----------~V-~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+..+++++.++.|.-+|.. +++.+-.+..+.. .+ ..++. .+..+++++.++ .|..+|..+|
T Consensus 70 ~g~vyv~~~~~~v~AlD~~----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg--~l~AlDa~TG 141 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDAR----DGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDG--RLEAIDAKTG 141 (689)
T ss_dssp TTEEEEECGGGCEEEEETT----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTS--EEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEECC----CCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCC--EEEEEECCCC
Confidence 4566667778889999987 3333333332211 01 11222 355788888887 8999999999
Q ss_pred eEEEEecCC-CCCCeEEEEEec---CCCEEEEEe------cCCeEEEEEc-CCCeeeeeece------------------
Q psy10566 382 LLRVKLNHS-PEDSLTSCSWNR---DGTKFVCGG------IRGQFYQCDI-EGQVLDSWEGV------------------ 432 (604)
Q Consensus 382 ~~~~~~~~~-~~~~v~~~~~~~---~~~~l~s~~------~dg~i~iwd~-~~~~~~~~~~~------------------ 432 (604)
+.+..+... +......+..+| ++ .+++++ .+|.|..||. +|+.+-.+...
T Consensus 142 ~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 220 (689)
T 1yiq_A 142 QRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAK 220 (689)
T ss_dssp CEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHT
T ss_pred CEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccc
Confidence 988776543 211111111122 44 444443 3689999998 57776555310
Q ss_pred ---------------eEEEEEEcCCCCEEEEEeCCCe-------------------EEEEEcCCCcccccccC-------
Q psy10566 433 ---------------RVNCLWCRSDGKSVLAADTHHR-------------------IRTYNFEHLTDSNLLQE------- 471 (604)
Q Consensus 433 ---------------~v~~l~~s~~g~~l~~~~~dg~-------------------I~i~d~~~~~~~~~~~~------- 471 (604)
....+++++++..+++++.++. |..+|..+++.......
T Consensus 221 ~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 221 TWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp TCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred ccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 0124678888899999888764 99999999876654432
Q ss_pred ---CCCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeEeecccc-ceE------------------------EE
Q psy10566 472 ---DHPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQF------------------------TI 520 (604)
Q Consensus 472 ---~~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~------------------------~i 520 (604)
..+.....+..+|+ .++.++.+|.++++|.++|+.+........ ... .+
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~ 380 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL 380 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeE
Confidence 11222223333554 788899999999999999988743321110 000 00
Q ss_pred E-----------eeeCCCCCcEEEEEeC---------------------------------------------CCcEEEE
Q psy10566 521 H-----------SCFGGANQDFVASGSE---------------------------------------------DGKVYIW 544 (604)
Q Consensus 521 ~-----------~~~~~~~~~~l~sgs~---------------------------------------------dg~I~iw 544 (604)
. .+.++|+..++++.+. +|.|+.|
T Consensus 381 ~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~ 460 (689)
T 1yiq_A 381 VTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAW 460 (689)
T ss_dssp ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEE
T ss_pred eCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEE
Confidence 0 0233466666665532 3789999
Q ss_pred eCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 545 HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
|..+|+.+..+..+.. +..-.+... +.+++.++.||.|+.||.++++
T Consensus 461 D~~tG~~~W~~~~~~~-~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 461 DPVKQQAAWEVPYVTI-FNGGTLSTA-GNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp ETTTTEEEEEEEESSS-CCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred ECCCCCeEeEccCCCC-ccCccceEC-CCEEEEECCCCcEEEEECCCCc
Confidence 9999999988875543 333355555 6788899999999999999987
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.05 E-value=1.9e-10 Score=116.64 Aligned_cols=199 Identities=13% Similarity=0.096 Sum_probs=117.6
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeece---e
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGV---R 433 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~---~ 433 (604)
++..+++++.++ .|+.||..+|+.+..+.. ..+.+..+..++..+++++.||.|+.||. +|+.+..+... .
T Consensus 8 ~~~~v~~gs~dg--~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDG--SLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTS--EEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCC--EEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 467888999888 899999999998877763 34555556677888888899999999999 57665555432 1
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~ 513 (604)
+.+.-+..++..+++++.++.++.||..+++......... ...++|++..+++++.++.|+.||.++++.+..+...
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 1000011135567888889999999999887765554332 2345668889999999999999999999887666532
Q ss_pred ccceEEEEeeeCCCCC---cEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCee-EEEEcCC
Q psy10566 514 TQGQFTIHSCFGGANQ---DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS-CVAWNPV 570 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~---~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~-~v~~sp~ 570 (604)
. ........+. ..+++++.||.|+.||..+|+.+...... .++. ...++++
T Consensus 160 ~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~d 214 (369)
T 2hz6_A 160 D-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQRE 214 (369)
T ss_dssp E-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTS
T ss_pred c-----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCC
Confidence 1 1112222221 45777889999999999999998887643 4443 3455555
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=5e-07 Score=86.78 Aligned_cols=249 Identities=10% Similarity=0.012 Sum_probs=156.8
Q ss_pred CeEEEEECCCeEEEEEeCCCCcee-EeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCC
Q psy10566 314 LKLATGSKDTTVIIWDVDPVTFTC-QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE 392 (604)
Q Consensus 314 ~~lasgs~dg~i~iwd~~~~~~~~-~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~ 392 (604)
.+|..+. .+.|+.++++...... .....+......+..++|++++..|..+.... +.|..++..++....... ...
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~-~~I~~~~~~g~~~~~~~~-~~~ 78 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE-PSIGRASLHGGEPTTIIR-QDL 78 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTT-TEEEEEESSSCCCEEEEC-TTC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCC-CEEEEEecCCCCcEEEEE-CCC
Confidence 4455554 3478888887322110 00111111223578999999877777666543 389999998765433332 222
Q ss_pred CCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCeeeeee--c-eeEEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCcc
Q psy10566 393 DSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEGQVLDSWE--G-VRVNCLWCRSDGKSVLAADT---HHRIRTYNFEHLTD 465 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~--~-~~v~~l~~s~~g~~l~~~~~---dg~I~i~d~~~~~~ 465 (604)
.....+++++++..++.+ ...+.|.++++++.....+. + .....++++|++..++.+.. .+.|..++......
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 467899999976655544 55679999999875443332 2 35789999997776666654 36898888865433
Q ss_pred cccc-cCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 466 SNLL-QEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 466 ~~~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
.... ........+++++++..++++. ..+.|.++|+........+.+. .....+. . .++.++++....+.|.+
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~---~-d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVT---S-YGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEE---E-ETTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEE---E-eCCEEEEEECCCCeEEE
Confidence 2222 2234578899999877666555 4678999999765433333321 1222332 1 23445555556789999
Q ss_pred EeCCCCcceEEeeCCC-CCeeEEEEcCC
Q psy10566 544 WHVKRELPIATLSGHT-RTVSCVAWNPV 570 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~-~~V~~v~~sp~ 570 (604)
+|..+++.+.++.... .....+++.|+
T Consensus 234 ~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 234 MDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EeCCCCCceEEEccccccccceeeecCc
Confidence 9999999888886443 24788888887
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.02 E-value=7.8e-08 Score=97.60 Aligned_cols=257 Identities=12% Similarity=0.022 Sum_probs=161.7
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
++..++.++.++.|..+|..+ ++.................. +..+++++.++ .+..+|..+|+.........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~t----G~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g--~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSD----GTVAWQTKVAGEALSRPVVS--DGLVLIHTSNG--QLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTT----CCEEEEEECSSCCCSCCEEE--TTEEEEECTTS--EEEEEETTTCCEEEEEECCC
T ss_pred eCCEEEEEcCCCEEEEEECCC----CCEEEEEeCCCceEcCCEEE--CCEEEEEcCCC--eEEEEECCCCcEEEEEeCCC
Confidence 345677788899999999872 23333333222111111222 44677777777 89999999998877665321
Q ss_pred CCC----eEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee---------EEEEEEcC--CCCEEEEEeCCCeE
Q psy10566 392 EDS----LTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR---------VNCLWCRS--DGKSVLAADTHHRI 455 (604)
Q Consensus 392 ~~~----v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~---------v~~l~~s~--~g~~l~~~~~dg~I 455 (604)
... ...... .+..+++++.++.+..+|. +|+.+....... +..+...| .+..+++++.++.+
T Consensus 174 ~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 174 PSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp -----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred CceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 110 011122 2457888888999999998 577665543211 00011111 35678888889999
Q ss_pred EEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 456 RTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
..+|..+++....... .....+.. ++..+++++.++.+..+|..+++.+............ ... ..+..|+.+
T Consensus 252 ~~~d~~tG~~~w~~~~-~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~--~~~--~~~~~l~v~ 324 (376)
T 3q7m_A 252 TALDLRSGQIMWKREL-GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT--SPV--LYNGNLVVG 324 (376)
T ss_dssp EEEETTTCCEEEEECC-CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC--CCE--EETTEEEEE
T ss_pred EEEECCCCcEEeeccC-CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc--CCE--EECCEEEEE
Confidence 9999988765544332 22334443 4678888889999999999999887665522111100 011 124578889
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeE-EEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSC-VAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~-v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.+|.|+++|..+|+.+.........+.+ .... +..|+.++.||.|..|+
T Consensus 325 ~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~---~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 325 DSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA---DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE---TTEEEEEBTTSCEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE---CCEEEEEeCCCEEEEEe
Confidence 99999999999999998887764333332 2222 34677788999999886
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.01 E-value=3e-08 Score=108.60 Aligned_cols=269 Identities=13% Similarity=0.043 Sum_probs=172.1
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccC-C----CCeeE-EEECCCCCeEEEEeCC----CceEEEEEECCCc
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-T----LGVAY-LAWSPDSSHLLVVGPE----DCHELWVWNIETE 381 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~----~~V~~-l~~spd~~~l~s~~~d----~~~~i~vwd~~~~ 381 (604)
++..++.++.|+.|..+|.. +++.+-.+..+ . ..+.+ ... .+..+++++.. ..+.|+.||..+|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~----tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAA----TGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETT----TCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEcCCCEEEEEECC----CCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCC
Confidence 35678888889999999988 33344444332 1 11111 111 23455555432 0138999999999
Q ss_pred eEEEEecCCCCC-------------------------------CeEEEEEecCCCEEEEEecCC----------------
Q psy10566 382 LLRVKLNHSPED-------------------------------SLTSCSWNRDGTKFVCGGIRG---------------- 414 (604)
Q Consensus 382 ~~~~~~~~~~~~-------------------------------~v~~~~~~~~~~~l~s~~~dg---------------- 414 (604)
+.+..+...... ....++++|++..++.++.++
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCe
Confidence 988766532111 113578889999998887664
Q ss_pred ---eEEEEEc-CCCeeeeeec--e---------eEEEEEEcCCC---CEEEEEeCCCeEEEEEcCCCcccccccCC----
Q psy10566 415 ---QFYQCDI-EGQVLDSWEG--V---------RVNCLWCRSDG---KSVLAADTHHRIRTYNFEHLTDSNLLQED---- 472 (604)
Q Consensus 415 ---~i~iwd~-~~~~~~~~~~--~---------~v~~l~~s~~g---~~l~~~~~dg~I~i~d~~~~~~~~~~~~~---- 472 (604)
.|..+|. +|+..-.+.. + ....+....+| ..++.++.+|.++++|..+++........
T Consensus 281 ~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW 360 (677)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc
Confidence 4888888 4776655432 1 12222333467 67889999999999999887654322210
Q ss_pred --------CC------------------------eeEEEECCCCCEEEEEecC---------------------------
Q psy10566 473 --------HP------------------------VMSFTIDATDRLALLNVST--------------------------- 493 (604)
Q Consensus 473 --------~~------------------------i~~~~~s~~~~~l~~~~~d--------------------------- 493 (604)
.+ -..++++|++..+++...+
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 00 1256889998888886542
Q ss_pred ----------------CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 494 ----------------QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 494 ----------------g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
+.|..||+.+++.+-.+...... .. ......+..++.++.||.+++||.++|+.+..+..
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~---g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW-NG---GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC-CC---CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC-cC---cceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 77999999999988776533211 11 11124567888899999999999999999999874
Q ss_pred CC-CCeeEEEEcCCCCcEEEEEeC----------------CCcEEEECCC
Q psy10566 558 HT-RTVSCVAWNPVYHQMIASVSD----------------DCTVRIWGPH 590 (604)
Q Consensus 558 h~-~~V~~v~~sp~~~~~l~s~s~----------------Dg~I~iW~~~ 590 (604)
.. ....-+.|.+++..+++..+. .+.+.+|.+.
T Consensus 517 ~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 517 GTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 43 223446677774455555433 3677788776
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.00 E-value=1.4e-07 Score=95.08 Aligned_cols=227 Identities=13% Similarity=0.010 Sum_probs=146.9
Q ss_pred Ec--CCCCeEEE-EECCCeEEEEEeCCCCceeEeeEEec-------cCCCCeeEEEECCCCCeEEEEeCC----CceEEE
Q psy10566 309 FS--PDGLKLAT-GSKDTTVIIWDVDPVTFTCQHRKTLE-------GHTLGVAYLAWSPDSSHLLVVGPE----DCHELW 374 (604)
Q Consensus 309 fs--pdg~~las-gs~dg~i~iwd~~~~~~~~~~~~~l~-------~h~~~V~~l~~spd~~~l~s~~~d----~~~~i~ 374 (604)
++ +++++|+. |..+++|.|+|+.+.....+..+++. ........+..+|+| .++++..+ +.+.|.
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 36 78886655 55778899999974434456666663 111245667889999 66666554 113799
Q ss_pred EEECCCceEEEEecCCCC--CCeEEEEEecCCCEEEEEe-------------------cCCeEEEEEcC-CCeeeeeec-
Q psy10566 375 VWNIETELLRVKLNHSPE--DSLTSCSWNRDGTKFVCGG-------------------IRGQFYQCDIE-GQVLDSWEG- 431 (604)
Q Consensus 375 vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~-------------------~dg~i~iwd~~-~~~~~~~~~- 431 (604)
++|..+++.+.++..+.. ..-..+.|+|+++.+++.. .+.+|.+||++ ++.+..+.-
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 999999999888863311 2245688999999888885 36899999995 444555443
Q ss_pred ---eeEEEEEE--cCCCCEEEEEeC------CCeEEEEEcCCC-------------ccccccc--------CCCCeeEEE
Q psy10566 432 ---VRVNCLWC--RSDGKSVLAADT------HHRIRTYNFEHL-------------TDSNLLQ--------EDHPVMSFT 479 (604)
Q Consensus 432 ---~~v~~l~~--s~~g~~l~~~~~------dg~I~i~d~~~~-------------~~~~~~~--------~~~~i~~~~ 479 (604)
.....+.| +|+++++++++. +++|.+|....+ +....+. .......+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 23445555 999999888774 557766554322 1111010 024578899
Q ss_pred ECCCCCEEEEEec-CCeEEEEecCCC---ceeeEeecccc--------ce---EEEEeeeCCCCCcEEEEEe
Q psy10566 480 IDATDRLALLNVS-TQGVHLWDLRDR---ILLRKFQGVTQ--------GQ---FTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 480 ~s~~~~~l~~~~~-dg~I~lwd~~~~---~~~~~~~~~~~--------~~---~~i~~~~~~~~~~~l~sgs 536 (604)
+++||++|+++.. .+.|.+||+... +.+..+..... +. ..-+.+..+++|++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999998877 678999998632 34444332100 00 0012234479999999887
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=2e-08 Score=100.72 Aligned_cols=227 Identities=13% Similarity=0.048 Sum_probs=143.3
Q ss_pred ccCCCcEEEEEEcCCCCeEEEEEC-----CCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEECCCCCeEEEEe
Q psy10566 298 NDHCDEVWFCKFSPDGLKLATGSK-----DTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 298 ~~H~~~V~~v~fspdg~~lasgs~-----dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~spd~~~l~s~~ 366 (604)
.+|-..+.+++|+++|+++++-.. ++.|.+||+. +.+....+.. +...+..++++|++..+..+.
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~----tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd 138 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL----NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD 138 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT----TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC----CCeEEEEEECChhhcccccccceEEEecCCCEEEEEc
Confidence 356778999999999986665543 5789999987 2233333321 234568999998755554443
Q ss_pred ----CCCceEEEEEECCCceEEEEecCCCCCC-eEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcC
Q psy10566 367 ----PEDCHELWVWNIETELLRVKLNHSPEDS-LTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRS 441 (604)
Q Consensus 367 ----~d~~~~i~vwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~ 441 (604)
.++ .|.+||..+++....+. .|... .....+.++|..+.+.+.++.+..|. ..+..++++|
T Consensus 139 ~~~~~~~--~i~v~d~~~g~~~r~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----------~~~~gia~s~ 204 (343)
T 2qe8_A 139 PAPDDKA--ALIRVDLQTGLAARVLQ-GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-----------LGVNGIVLDA 204 (343)
T ss_dssp CCSGGGC--EEEEEETTTCCEEEECT-TCTTTSCCSCCCEETTEECBEECTTSCEECCC-----------CCEEEEEECT
T ss_pred CccCCCC--eEEEEECCCCCEEEEec-CCCcccccccceeECCEEEEeccCCCceecee-----------cccceeEecc
Confidence 334 89999999888766553 22111 00144556777777777777765553 2357799999
Q ss_pred CCCEEEEEeCCC-eEEEEEcCCCcc-----------cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeE
Q psy10566 442 DGKSVLAADTHH-RIRTYNFEHLTD-----------SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509 (604)
Q Consensus 442 ~g~~l~~~~~dg-~I~i~d~~~~~~-----------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~ 509 (604)
+|+.++++...+ .+..++...... ............++++++|.++++...++.|.+||..+++....
T Consensus 205 dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 205 ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEE
Confidence 999888887766 565555421110 01112234567899999999999888899999999856654333
Q ss_pred eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 510 ~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
.... ... ....+++.+++.++++.+..+.+.+|
T Consensus 285 ~~~~-~~~-~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 285 VTDE-KLS-WTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EECG-GGS-CEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EECC-cee-cCCeeEECCCCcEEEEeCcccccccc
Confidence 3221 111 22334445778777777655544444
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.96 E-value=6.7e-07 Score=90.21 Aligned_cols=222 Identities=11% Similarity=0.134 Sum_probs=144.6
Q ss_pred EC--CCCCeEEEEeCCCceEEEEEECCCc----eEEEEec------CCCCCCeEEEEEecCCCEEEEEecC------CeE
Q psy10566 355 WS--PDSSHLLVVGPEDCHELWVWNIETE----LLRVKLN------HSPEDSLTSCSWNRDGTKFVCGGIR------GQF 416 (604)
Q Consensus 355 ~s--pd~~~l~s~~~d~~~~i~vwd~~~~----~~~~~~~------~~~~~~v~~~~~~~~~~~l~s~~~d------g~i 416 (604)
++ +++++|++.+... .+|.++|+.+. +....+. .........+...|+| .++++..+ |.|
T Consensus 89 ~~~~~~r~~l~v~~l~s-~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRS-SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCTTCCSCEEEEEBTTT-CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred cCCCccCCEEEEccCCC-CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 36 8888888877765 48999999765 5555442 0111245667888999 77766555 789
Q ss_pred EEEEcC-CCeeeeeece-----eEEEEEEcCCCCEEEEEe-------------------CCCeEEEEEcCCCcccccccC
Q psy10566 417 YQCDIE-GQVLDSWEGV-----RVNCLWCRSDGKSVLAAD-------------------THHRIRTYNFEHLTDSNLLQE 471 (604)
Q Consensus 417 ~iwd~~-~~~~~~~~~~-----~v~~l~~s~~g~~l~~~~-------------------~dg~I~i~d~~~~~~~~~~~~ 471 (604)
.++|.. .+.+..+... -...++++|+++.+++.. ...+|.+||+.+.+....+..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999985 7778877632 234588999999888875 368999999998765554443
Q ss_pred C---CCeeEEEE--CCCCCEEEEEec------CCeEEEEecCCCce--eeEe--eccc---------c---c-eEEEEee
Q psy10566 472 D---HPVMSFTI--DATDRLALLNVS------TQGVHLWDLRDRIL--LRKF--QGVT---------Q---G-QFTIHSC 523 (604)
Q Consensus 472 ~---~~i~~~~~--s~~~~~l~~~~~------dg~I~lwd~~~~~~--~~~~--~~~~---------~---~-~~~i~~~ 523 (604)
. .....+.| +|+++++++++. +++|.+|....+.. .+.+ .... . . ......+
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 2 23334444 999999988875 55787766554321 1111 0000 0 0 0112334
Q ss_pred eCCCCCcEEEEEeC-CCcEEEEeCCC---CcceEEeeCCC--------------CCeeEEEEcCCCCcEEEEEe
Q psy10566 524 FGGANQDFVASGSE-DGKVYIWHVKR---ELPIATLSGHT--------------RTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 524 ~~~~~~~~l~sgs~-dg~I~iwd~~~---~~~~~~l~~h~--------------~~V~~v~~sp~~~~~l~s~s 579 (604)
..++||++|+++.. .+.|.+||+.. .+.+..+.... +....++++|+ +++|+.+.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD-Gk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD-GRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT-SSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC-CCEEEEEc
Confidence 55799999988876 68999999863 34454443220 13588999999 55555555
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.95 E-value=4e-10 Score=114.28 Aligned_cols=258 Identities=8% Similarity=-0.095 Sum_probs=137.0
Q ss_pred CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCC
Q psy10566 312 DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSP 391 (604)
Q Consensus 312 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~ 391 (604)
++..+++++.||.|+.||.. +++.+..+.. ..+.+..+..++..+++++.++ .|+.||..+|+.+.......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~----tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg--~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR----TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDG--SLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT----TCCEEEEEEC--CCSCCCC-----CCEEECTTTC--CEEEC-----CCSEECSCCH
T ss_pred eCCEEEEEcCCCEEEEEECC----CCCEEEEecC--CCceecceEcCCCEEEEeCCCC--EEEEEECCCCceeeeeeccC
Confidence 56789999999999999988 3444444444 4555556667787777777787 89999999988665544211
Q ss_pred CCCeEE-EEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc
Q psy10566 392 EDSLTS-CSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469 (604)
Q Consensus 392 ~~~v~~-~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~ 469 (604)
...+.+ ..+ ..+..+++++.++.++.||.. |+.+..+.... ...++|++..+++++.++.|+.||..+++.....
T Consensus 80 ~~~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 80 PELVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccccccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 111100 011 134567888899999999984 77765554432 2345668889999999999999999988765443
Q ss_pred cCCCCeeEEEECCCC---CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEE----EEEeCCCcEE
Q psy10566 470 QEDHPVMSFTIDATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFV----ASGSEDGKVY 542 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l----~sgs~dg~I~ 542 (604)
... .....+++.+. ..+++++.+|.|+.||.++++.+-.+.... .. +.....+.+|... +.+ ++.++
T Consensus 157 ~~~-~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-pv--~~~~~~~~dg~~~v~~~~~~--~~~l~ 230 (369)
T 2hz6_A 157 TYF-DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS-PV--VAFYVWQREGLRKVMHINVA--VETLR 230 (369)
T ss_dssp EEE-EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS-CE--EEEEECTTSSCEEECCEEEE--HHHHH
T ss_pred ecc-cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC-ce--EEEEEecCCceEeccceeec--cccee
Confidence 211 11223333332 567788899999999999998877665322 22 1222334555322 122 34566
Q ss_pred EEeCCCCc----ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 543 IWHVKREL----PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 543 iwd~~~~~----~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.+|..+|+ .+..+... +.+.+... . +..++.++.||.+..++..
T Consensus 231 ~ld~~tG~~~~~~~W~~~~~-~~~~sp~~--~-~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 231 YLTFMSGEVGRITKWKYPFP-KETEAKSK--L-TPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHHHTSCCCCC-CHHHHHHH--S-EEEECBEECSSCEECCEEE
T ss_pred eeehhcCCcccceeeeeccC-cccccccc--c-cceEEEecccCCEEecCcc
Confidence 66666665 43333211 11110001 1 3466677778888777765
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=1.3e-07 Score=89.70 Aligned_cols=208 Identities=12% Similarity=0.025 Sum_probs=141.5
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEc-CCCeeeeeec---eeEEEEEEcCCCCEEEEE-eCCCe
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDI-EGQVLDSWEG---VRVNCLWCRSDGKSVLAA-DTHHR 454 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~-~~~~~~~~~~---~~v~~l~~s~~g~~l~~~-~~dg~ 454 (604)
+.+..+..........++|++++..+++.+. ++.|.++|+ +++.+....- .....+++. ++.++.+ -.++.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 3455555333344689999998755555443 579999999 5777766542 123344444 4455444 45789
Q ss_pred EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEE
Q psy10566 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFV 532 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l 532 (604)
+.++|..+.+....+... ......++++++.++++..++.|.++|..+.+.+..+.-.... ...+.-+.+. +|...
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ly 165 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVW 165 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEE
Confidence 999999988766655433 1122445668888888778899999999999888877643221 1111122222 56555
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCC-------------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGH-------------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+....++.|.+.|..+++.+..+... ....+.++|+|++..+++++...++|.+-++....
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 55556889999999999999888642 13568999999977889999899999988886654
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.94 E-value=7.3e-08 Score=100.63 Aligned_cols=230 Identities=9% Similarity=0.051 Sum_probs=153.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEE-e-cCCCEEEEEe------------------cCCeEE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSW-N-RDGTKFVCGG------------------IRGQFY 417 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~s~~------------------~dg~i~ 417 (604)
||++++.+..++ .+|.+.|+.+.++...+..........+++ + |+++++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~-~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKAN-TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTT-TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCC-CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 889998887776 489999999999877444333456888898 5 8999999885 345788
Q ss_pred EEEcCC-Ceeeeee-ceeEEEEEEcCCCCEEEEEeCCC--------------------------------------eEEE
Q psy10566 418 QCDIEG-QVLDSWE-GVRVNCLWCRSDGKSVLAADTHH--------------------------------------RIRT 457 (604)
Q Consensus 418 iwd~~~-~~~~~~~-~~~v~~l~~s~~g~~l~~~~~dg--------------------------------------~I~i 457 (604)
+.|.+. +....+. +.....++++|+|+++++.+.+. .|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 888864 3333332 12446688999999999888553 3666
Q ss_pred EEcCC--Ccc-cccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCc------------eeeEeeccccceEEEE
Q psy10566 458 YNFEH--LTD-SNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRI------------LLRKFQGVTQGQFTIH 521 (604)
Q Consensus 458 ~d~~~--~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~------------~~~~~~~~~~~~~~i~ 521 (604)
.|..+ ... ...+.......++.++|||++++++.. +++|.++|+.+.+ .+.....-.. ...
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g---P~h 335 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG---PLH 335 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC---EEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC---cce
Confidence 66665 222 233444556778999999999888764 7789999998653 2222221111 223
Q ss_pred eeeCCCCCcEEEEEeCCCcEEEEeCCC----------CcceEEeeCCCCCe-----eEEEEcCCCCcEEEEEeC---CCc
Q psy10566 522 SCFGGANQDFVASGSEDGKVYIWHVKR----------ELPIATLSGHTRTV-----SCVAWNPVYHQMIASVSD---DCT 583 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg~I~iwd~~~----------~~~~~~l~~h~~~V-----~~v~~sp~~~~~l~s~s~---Dg~ 583 (604)
..++++|...++..-|+.|.+||+.+ .+.+.++..|..+- .++..+|| +++|+++.. |+.
T Consensus 336 -~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~D-Gk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 336 -TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDAT-NDWLVCLSKFSKDRF 413 (595)
T ss_dssp -EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCC-SSEEEEEESCCTTSS
T ss_pred -EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCC-CCEEEEcCCCCcccc
Confidence 44568994445555699999999987 56677777765432 22345898 666666543 332
Q ss_pred E----------EEECCCCCC
Q psy10566 584 V----------RIWGPHLNT 593 (604)
Q Consensus 584 I----------~iW~~~~~~ 593 (604)
+ .++|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 1 778885544
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.94 E-value=2.7e-08 Score=98.82 Aligned_cols=268 Identities=13% Similarity=0.042 Sum_probs=162.9
Q ss_pred cCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 299 ~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
.+...+.++...++|.+++ ++.+ |..+|.. +. ....+...........+. +..+.+++.++ .+..+|.
T Consensus 57 ~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~~---g~--~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~--~l~~~d~ 124 (330)
T 3hxj_A 57 SGEIIECRPSIGKDGTIYF-GSDK--VYAINPD---GT--EKWRFDTKKAIVSDFTIF--EDILYVTSMDG--HLYAINT 124 (330)
T ss_dssp GGGEEEECCEETTTTEECC-SSCE--EEEECCC---GG--GGGGSCC-----CCEEEE--TTEEEEECTTS--EEEEECT
T ss_pred cCCCcccceEEecCCcEEE-ecCc--EEEECCC---Cc--EEEEEECCCCcccCceEE--CCEEEEEecCC--EEEEEcC
Confidence 3445567788887876444 4434 7777742 11 111111111122222333 44677777676 7999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec--eeEEEEEEcCCCCEEEEEeCCCeEE
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIR 456 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~v~~l~~s~~g~~l~~~~~dg~I~ 456 (604)
. ++....... ....+.++...+++. +..++.++.+..+|..++....+.. ..+.++...+++... +++ +.|.
T Consensus 125 ~-g~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~ 198 (330)
T 3hxj_A 125 D-GTEKWRFKT-KKAIYATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVY 198 (330)
T ss_dssp T-SCEEEEEEC-SSCCCSCCEECTTSC-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEE
T ss_pred C-CCEEEEEcC-CCceeeeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEE
Confidence 8 766555442 233455666666665 6667788999999998766555442 345666777777744 444 8899
Q ss_pred EEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEE
Q psy10566 457 TYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 457 i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sg 535 (604)
.+| .++...... .....+.++..++++. +.+++.++.+..+|. ++..+..+........ .....+++ .|..+
T Consensus 199 ~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~---~~~~~~~g-~l~v~ 271 (330)
T 3hxj_A 199 AIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIES---SPVIGNTD-TIYFG 271 (330)
T ss_dssp EEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCS---CCEECTTS-CEEEE
T ss_pred EEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccc---cceEcCCC-eEEEe
Confidence 999 554333222 2345577888888775 566777888999984 5555555543322111 12222344 57778
Q ss_pred eCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCCC
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTN 594 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~~ 594 (604)
+.+|.|+.+|. +++.+..+......+.++...++ +. |..++.+|.+++........
T Consensus 272 t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~-g~-l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 272 SYDGHLYAINP-DGTEKWNFETGSWIIATPVIDEN-GT-IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp CTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTT-CC-EEEECTTSCEEEEEC-----
T ss_pred cCCCCEEEECC-CCcEEEEEEcCCccccceEEcCC-CE-EEEEcCCCeEEEEecccccc
Confidence 88989999996 67777777666667788888776 44 55688899999987765543
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.92 E-value=9.7e-07 Score=87.39 Aligned_cols=237 Identities=10% Similarity=0.008 Sum_probs=150.5
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec-CC-----------------CCCCeEEEEEecCCCEEEE
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN-HS-----------------PEDSLTSCSWNRDGTKFVC 409 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~-~~-----------------~~~~v~~~~~~~~~~~l~s 409 (604)
....+++|.++++.++++..++ .|..||..++....... .. ....+..+++.++...|++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDG--RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTS--EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCC--eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4567889999998777777776 79999988765432211 00 0124788999983345555
Q ss_pred EecCCeEEEEEcCCCeeeeee----c---eeEEEEEEcC-CCCEEEEEeC-----------------CCeEEEEEcCCCc
Q psy10566 410 GGIRGQFYQCDIEGQVLDSWE----G---VRVNCLWCRS-DGKSVLAADT-----------------HHRIRTYNFEHLT 464 (604)
Q Consensus 410 ~~~dg~i~iwd~~~~~~~~~~----~---~~v~~l~~s~-~g~~l~~~~~-----------------dg~I~i~d~~~~~ 464 (604)
+...+.+..+|.++..+..+. + .....+++.+ +|+..++... ++.|..||..+..
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 555566888888654333332 1 2478899999 8986665432 3678888877655
Q ss_pred ccccccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCc--eeeEeeccccceEEEEeeeCCCCCcEEEEEeC----
Q psy10566 465 DSNLLQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRI--LLRKFQGVTQGQFTIHSCFGGANQDFVASGSE---- 537 (604)
Q Consensus 465 ~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~---- 537 (604)
.............++++++++.++++ +..+.|..|++.... ....+..... . ..+...++|++.++...
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P---~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P---GNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E---EEEEECTTSCEEEEEEEETTS
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C---CCeEECCCCCEEEEecCcccc
Confidence 43333333445679999999877666 556899999987532 1122211111 1 22344678887666544
Q ss_pred ------CCcEEEEeCCCCcceEEeeCCC----CCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 538 ------DGKVYIWHVKRELPIATLSGHT----RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 538 ------dg~I~iwd~~~~~~~~~l~~h~----~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+.|..+|.. ++.+..+.... ..++++++. + +.++++...++.|.++++....
T Consensus 253 ~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp STTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSSCSEEEEEEC----
T ss_pred cccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-C-CEEEEeecCCCceEEEeccccc
Confidence 4678888864 77777776442 357777774 4 6777777778899999987544
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.90 E-value=5.2e-07 Score=94.24 Aligned_cols=233 Identities=13% Similarity=0.050 Sum_probs=159.2
Q ss_pred CCCCeEEEEEC-CCeEEEEEeCCCCceeEeeE--EeccCCCCeeEEEE-C-CCCCeEEEEeCC----------------C
Q psy10566 311 PDGLKLATGSK-DTTVIIWDVDPVTFTCQHRK--TLEGHTLGVAYLAW-S-PDSSHLLVVGPE----------------D 369 (604)
Q Consensus 311 pdg~~lasgs~-dg~i~iwd~~~~~~~~~~~~--~l~~h~~~V~~l~~-s-pd~~~l~s~~~d----------------~ 369 (604)
+||+++..... ++.|.+.|++ +.+... .+.. ...+..+++ + |+++++++++.. .
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~----t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCD----VMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETT----TTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred cCCCEEEEEcCCCCEEEEEECC----CceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 48887776654 5579999998 444444 4432 245888898 5 999999988522 1
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----------------------------------
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG----------------------------------- 414 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg----------------------------------- 414 (604)
.+.+.++|.++.+...++..+. ....++++|+|+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 2379999999998888877432 356788999999999988553
Q ss_pred ---eEEEEEcCC---Ce-eeee-eceeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCc------------ccccccCCC
Q psy10566 415 ---QFYQCDIEG---QV-LDSW-EGVRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHLT------------DSNLLQEDH 473 (604)
Q Consensus 415 ---~i~iwd~~~---~~-~~~~-~~~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~~------------~~~~~~~~~ 473 (604)
.|.+.|... +. +..+ .+....++.++|||+++++++ .+.+|.++|+.+.+ .........
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 245555532 22 2222 223567899999999887776 46789999998653 122333456
Q ss_pred CeeEEEECCCCCEEEEEecCCeEEEEecCC----------CceeeEeeccccceEEEE--eeeCCCCCcEEEEEeC---C
Q psy10566 474 PVMSFTIDATDRLALLNVSTQGVHLWDLRD----------RILLRKFQGVTQGQFTIH--SCFGGANQDFVASGSE---D 538 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~----------~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~sgs~---d 538 (604)
....++|+++|...++...++.|.+||+.+ ...+.++..+-+...... ....++||++|++... |
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 788999999995455666799999999987 456666665544221111 1245799999998864 3
Q ss_pred Cc----------EEEEeCCCCc
Q psy10566 539 GK----------VYIWHVKREL 550 (604)
Q Consensus 539 g~----------I~iwd~~~~~ 550 (604)
.. -.++|+..++
T Consensus 412 r~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 412 RFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp SSCCCCSSCCEEEEEEECSSSS
T ss_pred ccccCCCCCCCcceEEEcCCCc
Confidence 32 1789996554
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.85 E-value=5.4e-06 Score=92.89 Aligned_cols=275 Identities=11% Similarity=0.102 Sum_probs=174.6
Q ss_pred EEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE
Q psy10566 304 VWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL 383 (604)
Q Consensus 304 V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~ 383 (604)
|.++...++|.+.+ |+.++-|..|+... ........ ..+...|.++...+++...+....+| +..||..++..
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~--~~~~~~~~-~~~~~~i~~i~~d~~g~lwigt~~~G---l~~~~~~~~~~ 247 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQ--KTFEKVIP-ILGTKQIQAILQQSPTRIWVATEGAG---LFLINPKTKEI 247 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTT--CCEEECC-----CCCEEEEEEEETTEEEEEEBSSC---EEEEETTTTEE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCC--CeEEEecC-CCCCCeeEEEEEcCCCCEEEEECCCC---eEEEeCCCCeE
Confidence 88888888887555 55554588888762 22221111 11345788998888876655544455 99999988765
Q ss_pred EEEecC------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee----------ceeEEEEEEcCCCCEEE
Q psy10566 384 RVKLNH------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE----------GVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 384 ~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------~~~v~~l~~s~~g~~l~ 447 (604)
...... -....|.++...++|...+ |+.+ -|.+||........+. ...|.++...++|. +.
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW 324 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MW 324 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EE
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EE
Confidence 443221 1235689998888877554 4445 5888898655554432 23689999999887 55
Q ss_pred EEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc---c--c
Q psy10566 448 AADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV---T--Q 515 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~---~--~ 515 (604)
.|+.++-|..|+..+........ ....|.++..+++|. +.+|+.++.|..||..++......... . -
T Consensus 325 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGI 403 (795)
T ss_dssp EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CC
T ss_pred EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCC
Confidence 67777788889876543222111 245688999988876 556777777999998876543322111 0 0
Q ss_pred ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee----CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS----GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 516 ~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~----~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
....+.+++..++++.|..|+.++-|.+||..+++...... .+...|.++...++ +.+.+.. .+| |.+|+..+
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~lwigt-~~G-l~~~~~~~ 480 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE-GNLWLGT-LSA-LVRFNPEQ 480 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS-SCEEEEE-SSC-EEEEETTT
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC-CCEEEEe-cCc-eeEEeCCC
Confidence 11134444445677757778887789999998876433221 13457999998887 5555443 444 88888765
Q ss_pred C
Q psy10566 592 N 592 (604)
Q Consensus 592 ~ 592 (604)
+
T Consensus 481 ~ 481 (795)
T 4a2l_A 481 R 481 (795)
T ss_dssp T
T ss_pred C
Confidence 4
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.85 E-value=1.3e-06 Score=86.54 Aligned_cols=239 Identities=13% Similarity=-0.013 Sum_probs=146.5
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----------------cCCCCeeEEEECC-CCCeEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----------------GHTLGVAYLAWSP-DSSHLL 363 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----------------~h~~~V~~l~~sp-d~~~l~ 363 (604)
....+++|+++|+++.++..++.|..|+.. ........... .....+..+++.+ ++ .|+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~ 95 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGP--NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLY 95 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCT--TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCC--CCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEE
Confidence 345678999999978888889999999876 22222111100 0113578899998 55 455
Q ss_pred EEeCCCceEEEEEECCCceEEEEec--C-CCCCCeEEEEEec-CCCEEEEEec-----------------CCeEEEEEcC
Q psy10566 364 VVGPEDCHELWVWNIETELLRVKLN--H-SPEDSLTSCSWNR-DGTKFVCGGI-----------------RGQFYQCDIE 422 (604)
Q Consensus 364 s~~~d~~~~i~vwd~~~~~~~~~~~--~-~~~~~v~~~~~~~-~~~~l~s~~~-----------------dg~i~iwd~~ 422 (604)
++...+ .+..+|..++....... . ........+++.+ +|+..++... ++.|..||..
T Consensus 96 v~d~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 96 IVDCYY--HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEETTT--EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEECCC--CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 554444 48889987664322211 1 1113468899999 8987766432 3678888886
Q ss_pred CCeeeeee-c-eeEEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCcc---cccccCCCCeeEEEECCCCCEEEEEec----
Q psy10566 423 GQVLDSWE-G-VRVNCLWCRSDGKSVLAA-DTHHRIRTYNFEHLTD---SNLLQEDHPVMSFTIDATDRLALLNVS---- 492 (604)
Q Consensus 423 ~~~~~~~~-~-~~v~~l~~s~~g~~l~~~-~~dg~I~i~d~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~---- 492 (604)
+..+..+. . .....++++++++.++++ +..+.|.+|++..... ........ ...++++++|++.++...
T Consensus 174 ~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 174 TKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 44433322 2 246679999999976666 5568999999875321 11111223 788999999986666544
Q ss_pred ------CCeEEEEecCCCceeeEeeccccc-eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 493 ------TQGVHLWDLRDRILLRKFQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 493 ------dg~I~lwd~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.+.|..+|. .++.+..+...... ...+..+.. .++.++++...++.|.++++..
T Consensus 253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp STTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 467888886 46666666543211 011111222 3566666666678888888753
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.83 E-value=3.2e-07 Score=85.85 Aligned_cols=193 Identities=11% Similarity=0.114 Sum_probs=128.0
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEc-CCCeeeeeece-eEEEEEEcCCCCEEEEEe-CCCeEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDI-EGQVLDSWEGV-RVNCLWCRSDGKSVLAAD-THHRIRT 457 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~-~~~~~~~~~~~-~v~~l~~s~~g~~l~~~~-~dg~I~i 457 (604)
.+..+.+........+.|+ ++..+.+.+.+| .|+.+|+ +++.+....-. ......+.++++.+.... .++.+.+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 3455554444456889998 677777777776 8999999 57777665432 222222223355555554 4789999
Q ss_pred EEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecccc--ceEEEEeeeCCCCCcEEEEE
Q psy10566 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ--GQFTIHSCFGGANQDFVASG 535 (604)
Q Consensus 458 ~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~sg 535 (604)
||..+.+....+.....-..+ +++++.++.+..++.|.++|..+.+.+.++..... ....+.-+.+ .+|...+..
T Consensus 112 ~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~ 188 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW-VDGEIFANV 188 (262)
T ss_dssp EETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEE
T ss_pred EECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE-ECCEEEEEE
Confidence 999998877666654333333 35677777777788899999999988888765321 1111111222 267655555
Q ss_pred eCCCcEEEEeCCCCcceEEeeCC------------CCCeeEEEEcCCCCcEEEEEe
Q psy10566 536 SEDGKVYIWHVKRELPIATLSGH------------TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 536 s~dg~I~iwd~~~~~~~~~l~~h------------~~~V~~v~~sp~~~~~l~s~s 579 (604)
-.++.|.+.|..+|+.+..+... ....+.++|+|++..+++||-
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 56889999999999998887642 135689999998566666653
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.81 E-value=3.5e-06 Score=80.80 Aligned_cols=203 Identities=10% Similarity=-0.045 Sum_probs=133.5
Q ss_pred CcEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..+..++|++++..|. +-..++.|.+++.+. .. ....+.........++++|++..+..+.... ..|.+++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g--~~--~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~-~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHG--GE--PTTIIRQDLGSPEGIALDHLGRTIFWTDSQL-DRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSS--CC--CEEEECTTCCCEEEEEEETTTTEEEEEETTT-TEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCC--CC--cEEEEECCCCCccEEEEEecCCeEEEEECCC-CEEEEEEcCC
Confidence 4578999999766554 444578999999872 11 1122222235678999999877666665543 3899999875
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEec---CCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEe-CCC
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI---RGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAAD-THH 453 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~-~dg 453 (604)
........ ........++++|++..++.+.. .+.|..+++++.....+. ......+++++++..++.+. ..+
T Consensus 111 ~~~~~~~~-~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 111 TQRRVLFD-TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp CSCEEEEC-SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEE-CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCC
Confidence 43322222 12245789999997666655554 368999999876544432 13578899999877766555 457
Q ss_pred eEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec
Q psy10566 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~ 512 (604)
.|.++|..................+++. +..++++. ..+.|..+|..+++.+..+..
T Consensus 190 ~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred EEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 8999999765433333333344566664 44555544 568999999999988877753
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.77 E-value=6.7e-07 Score=97.76 Aligned_cols=271 Identities=10% Similarity=-0.019 Sum_probs=164.6
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC----------Ce-eEEEECCCCCeEEEEeCCCceEEEEEECCCc
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL----------GV-AYLAWSPDSSHLLVVGPEDCHELWVWNIETE 381 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~----------~V-~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~ 381 (604)
+..++.++.++.|.-+|.. +++.+-.+..... .+ ..+++ .+..+++++.++ .|..+|..+|
T Consensus 66 ~g~vyv~~~~~~v~AlD~~----tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg--~l~alD~~tG 137 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAA----SGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDG--RLIALDAKTG 137 (668)
T ss_dssp TTEEEEEEGGGEEEEEETT----TCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTS--EEEEEETTTC
T ss_pred CCEEEEECCCCeEEEEECC----CChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCC--EEEEEECCCC
Confidence 4456667778888888887 3333333322111 00 11222 345777888787 8999999999
Q ss_pred eEEEEecCCCCCCeEEEEEec--CCCEEEEEec------CCeEEEEEc-CCCeeeeeece--------------------
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNR--DGTKFVCGGI------RGQFYQCDI-EGQVLDSWEGV-------------------- 432 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~------dg~i~iwd~-~~~~~~~~~~~-------------------- 432 (604)
+.+..+..........+...| .+..++++.. +|.|..+|. +|+.+-.+...
T Consensus 138 ~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 138 KAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp CEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred CEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccC
Confidence 988776532111111111111 2345555543 589999998 57776655321
Q ss_pred -------------eEEEEEEcCCCCEEEEEeCCC-------------------eEEEEEcCCCcccccccCC--------
Q psy10566 433 -------------RVNCLWCRSDGKSVLAADTHH-------------------RIRTYNFEHLTDSNLLQED-------- 472 (604)
Q Consensus 433 -------------~v~~l~~s~~g~~l~~~~~dg-------------------~I~i~d~~~~~~~~~~~~~-------- 472 (604)
....+++.++...++.++.++ .|..+|..+++........
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 012367888888888888776 3999999988766544321
Q ss_pred --CCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeEeecccc-ceE--------EE-------------E----
Q psy10566 473 --HPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQ-GQF--------TI-------------H---- 521 (604)
Q Consensus 473 --~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~-~~~--------~i-------------~---- 521 (604)
.+.....+..+++ .+++++.+|.++++|..+|+.+........ ... .+ .
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 2333333334665 688899999999999999988744332110 000 00 0
Q ss_pred -------eeeCCCCCcEEEEE------------------------------------eCCCcEEEEeCCCCcceEEeeCC
Q psy10566 522 -------SCFGGANQDFVASG------------------------------------SEDGKVYIWHVKRELPIATLSGH 558 (604)
Q Consensus 522 -------~~~~~~~~~~l~sg------------------------------------s~dg~I~iwd~~~~~~~~~l~~h 558 (604)
...++|+...++.. ..+|.|+.||..+|+.+.....+
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~ 457 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP 457 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC
Confidence 01223443443321 13488999999999998877644
Q ss_pred CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 559 TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 559 ~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
. ++....+... +.+++.++.||.|+.||.++++
T Consensus 458 ~-~~~~~~~~t~-gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 458 T-HWNGGTLSTA-GNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp S-SCCCCEEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred C-CCcCceeEeC-CCEEEEECCcccchhhhhhcCh
Confidence 3 3333334444 5678888999999999999886
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.76 E-value=1.1e-05 Score=79.07 Aligned_cols=207 Identities=13% Similarity=0.063 Sum_probs=128.0
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~ 369 (604)
+.+.+..+..+ .....++|+++|+++++-..++.|..||.+ . .. ...+. ....+..+++.++|+.+++....+
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g-~~--~~~~~-~~~~p~gia~~~dG~l~vad~~~~ 93 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPD--G-NQ--QIHAT-VEGKVSGLAFTSNGDLVATGWNAD 93 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTT--C-CE--EEEEE-CSSEEEEEEECTTSCEEEEEECTT
T ss_pred CceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCC--C-ce--EEEEe-CCCCceeEEEcCCCcEEEEeccCC
Confidence 34445555433 467789999999977776678899988876 2 11 12222 234688999999998666554332
Q ss_pred ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee------------ec-eeEEE
Q psy10566 370 CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW------------EG-VRVNC 436 (604)
Q Consensus 370 ~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~-~~v~~ 436 (604)
...|..+|..+++...............++..+++..+++-..++.|+.+|..+.....+ .. ...+.
T Consensus 94 ~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~png 173 (306)
T 2p4o_A 94 SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG 173 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE
T ss_pred cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCC
Confidence 125777888887754433222223345555555555455544688999999864211110 01 13445
Q ss_pred EEEcCCCCEEEEEe-CCCeEEEEEcCC-Ccc--cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce
Q psy10566 437 LWCRSDGKSVLAAD-THHRIRTYNFEH-LTD--SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL 506 (604)
Q Consensus 437 l~~s~~g~~l~~~~-~dg~I~i~d~~~-~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~ 506 (604)
+ +++++.++++. ..+.|..|++.. +.. ...+........++++++|++.++....+.|.++|.. ++.
T Consensus 174 i--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 174 L--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp E--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred c--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 5 78887666554 567899999875 221 1111112346778999999877777778899999975 544
No 247
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.76 E-value=3e-05 Score=86.87 Aligned_cols=274 Identities=10% Similarity=0.100 Sum_probs=173.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec----cCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE----GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~----~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
...|.++...++|. |-.|+.++-|..|+.. ........... -....|.++...++|...+ |+.++ -|..|
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~--~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~--Gl~~~ 382 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI--RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDG--GLNLY 382 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGG--GGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSS--CEEEE
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCC--cccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCC--CeEEE
Confidence 36799999999987 4456777778888865 22222111111 0235699999998887555 55543 29999
Q ss_pred ECCCceEEEEecC-------CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-------ceeEEEEEEcCC
Q psy10566 377 NIETELLRVKLNH-------SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-------GVRVNCLWCRSD 442 (604)
Q Consensus 377 d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~v~~l~~s~~ 442 (604)
|..++........ -....|.++...+++..+.+|+.++-+..+|........+. ...|.++...++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE 462 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence 9888765443211 12356899998888886777888778999998654444443 246889998888
Q ss_pred CCEEEEEeCCCeEEEEEcCCCccccccc-------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec---
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQ-------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG--- 512 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~--- 512 (604)
|...+.. . +.+.+||..+........ ....|.++..++++...+.. . +.+..||..++.. .+..
T Consensus 463 g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~ 536 (795)
T 4a2l_A 463 GNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKASILP 536 (795)
T ss_dssp SCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECCCSC
T ss_pred CCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEecCCC
Confidence 8855544 4 458889987654333221 13568899999888765544 4 5599999887655 2321
Q ss_pred -cccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee---C-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 513 -VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLS---G-HTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 513 -~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~---~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
.......+.++...++|.+.+ |+.. -|..||..+++.. .+. + ....|.++...++ +.+.+++ .. -|..|
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~-g~lWi~t-~~-Gl~~~ 610 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWV-GTRE-GFYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSF-GRLWLST-NR-GISCF 610 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEE-EECGGGTCSCSCEEEEEECTT-SCEEEEE-TT-EEEEE
T ss_pred CCCCCCCeeEEEEECCCCCEEE-EeCC-CceeECCCCCcEE-EeCCCCCCchhheEEEEECCC-CCEEEEc-CC-ceEEE
Confidence 011112344455556777554 4444 5888998776533 332 1 1346889998887 5655554 34 46667
Q ss_pred CCCCC
Q psy10566 588 GPHLN 592 (604)
Q Consensus 588 ~~~~~ 592 (604)
++.++
T Consensus 611 ~~~~~ 615 (795)
T 4a2l_A 611 NPETE 615 (795)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 76654
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.75 E-value=2.7e-06 Score=80.52 Aligned_cols=210 Identities=8% Similarity=-0.057 Sum_probs=137.3
Q ss_pred eeEeeEEeccCCC--CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEE-Eec
Q psy10566 336 TCQHRKTLEGHTL--GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC-GGI 412 (604)
Q Consensus 336 ~~~~~~~l~~h~~--~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~ 412 (604)
+.+.+.++. |.. ....+.|+|++..+++.+..+...|.++|+.+++....+..........+++. ++.++. .-.
T Consensus 8 ~~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 8 IVEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred CceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 344555554 443 35799999987555555543334899999999998888764333233455554 445544 445
Q ss_pred CCeEEEEEcC-CCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCC------CCeeEEEECCCCC
Q psy10566 413 RGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQED------HPVMSFTIDATDR 485 (604)
Q Consensus 413 dg~i~iwd~~-~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~------~~i~~~~~s~~~~ 485 (604)
++.+.++|.. .+.+..+....-....+++||+.++++..++.|.++|..+.+....+.-. ..+..+.+. ++.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred CCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 7899999984 56666664221123446678888888888899999999887655544421 135677777 665
Q ss_pred EEEEEecCCeEEEEecCCCceeeEeecccc----------ceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCC
Q psy10566 486 LALLNVSTQGVHLWDLRDRILLRKFQGVTQ----------GQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~ 549 (604)
..+....++.|.+.|..+++.+..+..... .......++++++++ +++++...++|++.++...
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 444444678999999999999988864210 011223344557764 6666667889998887653
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=1.2e-06 Score=82.03 Aligned_cols=193 Identities=10% Similarity=-0.023 Sum_probs=129.8
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEc-CCCeeeeeecee--EEEEEEcCCCCEEEEEeCCCeEEEE
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTY 458 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~--v~~l~~s~~g~~l~~~~~dg~I~i~ 458 (604)
+.+..+.+........+.|+ ++..+++.+.+|.|+.+|+ +++.+...-... ...+++.. ++..++.-.++.+.+|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEE
Confidence 34455554444556788887 4677778888899999999 466665552112 23344432 2334444567899999
Q ss_pred EcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEEEEEe
Q psy10566 459 NFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFVASGS 536 (604)
Q Consensus 459 d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~sgs 536 (604)
|..+.+....+.....-..++ ++++.|+++..++.|.++|..+.+.+.++.-.... ...+.-+.+ .+|...+...
T Consensus 122 D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanvw 198 (268)
T 3nok_A 122 SGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC-ANGVIYANIW 198 (268)
T ss_dssp ETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEET
T ss_pred ECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE-eCCEEEEEEC
Confidence 999988776666544333444 56788888888899999999999988887643321 111121222 2676555555
Q ss_pred CCCcEEEEeCCCCcceEEeeCC-------------CCCeeEEEEcCCCCcEEEEEe
Q psy10566 537 EDGKVYIWHVKRELPIATLSGH-------------TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 537 ~dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~v~~sp~~~~~l~s~s 579 (604)
.++.|.+.|..+++.+..+... ....+.|+|+|++..+++||-
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6889999999999998887532 136799999998677777764
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.73 E-value=5.3e-08 Score=96.60 Aligned_cols=255 Identities=11% Similarity=0.062 Sum_probs=154.6
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
..+..+|. +..++.++.|..|| . +.+.......+...+.++...+++... .++ .+ +..+|. +++....
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~----~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t-~~---l~~~d~-~g~~~~~ 92 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-T----DGSVKWFFKSGEIIECRPSIGKDGTIY-FGS-DK---VYAINP-DGTEKWR 92 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-T----TSCEEESSCGGGEEEECCEETTTTEEC-CSS-CE---EEEECC-CGGGGGG
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-C----CCcEEEEEecCCCcccceEEecCCcEE-Eec-Cc---EEEECC-CCcEEEE
Confidence 44555554 55566788899999 6 222233333334455677777777533 333 22 778886 5543322
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeece--eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Q psy10566 387 LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGV--RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 387 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~ 464 (604)
+.. .........+. +..+.+++.++.+..+|.+++........ .+.++...+++. +++++.++.|..+|.. +.
T Consensus 93 ~~~-~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 93 FDT-KKAIVSDFTIF--EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp SCC------CCEEEE--TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC
T ss_pred EEC-CCCcccCceEE--CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC
Confidence 221 11112223333 56778888899999999886655444322 345556666776 6667888999999988 44
Q ss_pred cccccc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEE
Q psy10566 465 DSNLLQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYI 543 (604)
Q Consensus 465 ~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~i 543 (604)
...... ....+.++.+.+++... +++ +.|..|| .+++....+...... +......++| .|..++.++.|..
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~---~~~~~~~~~g-~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWT---VTRPAISEDG-TIYVTSLDGHLYA 239 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCC---CSCCEECTTS-CEEEEETTTEEEE
T ss_pred EeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcc---eeceEECCCC-eEEEEcCCCeEEE
Confidence 333222 34456677777777744 444 7899999 777666555433222 2223334555 4666777888999
Q ss_pred EeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 544 WHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 544 wd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+|. +++.+..+......+.++...++ + .|..++.+|.|..++.
T Consensus 240 ~~~-~g~~~~~~~~~~~~~~~~~~~~~-g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 240 INP-DGTEKWRFKTGKRIESSPVIGNT-D-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp ECT-TSCEEEEEECSSCCCSCCEECTT-S-CEEEECTTCEEEEECT
T ss_pred ECC-CCCEeEEeeCCCCccccceEcCC-C-eEEEecCCCCEEEECC
Confidence 974 56666666655555556666655 3 4666778888999986
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.72 E-value=5.2e-06 Score=77.00 Aligned_cols=192 Identities=11% Similarity=0.087 Sum_probs=128.6
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEc-CCCeeeeeece-e--EEEEEEcCCCCEEEE-EeCCCe
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDI-EGQVLDSWEGV-R--VNCLWCRSDGKSVLA-ADTHHR 454 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~-~~~~~~~~~~~-~--v~~l~~s~~g~~l~~-~~~dg~ 454 (604)
+.+..+.+........+.|++ +..+.+.+.+| .|+.+|+ +++.+....-. . -..+++. ++.+.. .-.++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCE
Confidence 345556555556678899986 56666666654 8999999 57777665432 2 2333333 444444 456789
Q ss_pred EEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccc--eEEEEeeeCCCCCcEE
Q psy10566 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG--QFTIHSCFGGANQDFV 532 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l 532 (604)
+.+||..+.+....+.....-..++ +++..++++..++.|.++|..+.+.+.++.-...+ ...+.-+.+ .+|...
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~ly 163 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-VNGELL 163 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEE
T ss_pred EEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-eCCEEE
Confidence 9999999988777666544434444 56777777777899999999999888877643221 111111222 366666
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeCC-------------CCCeeEEEEcCCCCcEEEEEe
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSGH-------------TRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~h-------------~~~V~~v~~sp~~~~~l~s~s 579 (604)
+..-.+..|.+.|..+|+.+..+... ....+.++|+|++..+++||-
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 55556889999999999998887522 135689999998666777664
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.71 E-value=4e-07 Score=99.65 Aligned_cols=269 Identities=12% Similarity=-0.004 Sum_probs=154.9
Q ss_pred EEEEcC-CCCeEEEEECCC-----------eEEEEEeCCCCceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 306 FCKFSP-DGLKLATGSKDT-----------TVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 306 ~v~fsp-dg~~lasgs~dg-----------~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
.+++.+ +|++++.|+.+. .+.+||.. +.+...+..+.. +.....++++.++++.+++||.++. .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-K 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-C
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC-c
Confidence 456677 888888887543 57888877 444444444432 2333446788899999999886653 7
Q ss_pred EEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cC-----CeEEEEEcCCCeeeeeec-----e--eEEEEEE
Q psy10566 373 LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IR-----GQFYQCDIEGQVLDSWEG-----V--RVNCLWC 439 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-----g~i~iwd~~~~~~~~~~~-----~--~v~~l~~ 439 (604)
+++||..++.....-.......-.+++..++++.++.|+ .+ ..+.+||........... . .-....+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 999999887654432211222234566677999999998 44 468999996554444311 0 0000112
Q ss_pred cCCCCEEEEEeCC---------CeEEEEEcCCCcccccccC----------CCCeeEEEEC-CCCCEEEEEecCC-----
Q psy10566 440 RSDGKSVLAADTH---------HRIRTYNFEHLTDSNLLQE----------DHPVMSFTID-ATDRLALLNVSTQ----- 494 (604)
Q Consensus 440 s~~g~~l~~~~~d---------g~I~i~d~~~~~~~~~~~~----------~~~i~~~~~s-~~~~~l~~~~~dg----- 494 (604)
..++..++.++.+ ..+..||..+......... .....++.+. .+++.+++|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 2345555555444 3567888776542211111 1122334443 4677778877532
Q ss_pred ------eEEEEecCCCceeeEe--eccccceEEEEeeeCCCCCcEEEEEeCC-----------CcEEEEeCCCCcceE--
Q psy10566 495 ------GVHLWDLRDRILLRKF--QGVTQGQFTIHSCFGGANQDFVASGSED-----------GKVYIWHVKRELPIA-- 553 (604)
Q Consensus 495 ------~I~lwd~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----------g~I~iwd~~~~~~~~-- 553 (604)
.|.+||..+..-.... ....... ...++. .+++++++.|+.+ ..+.+||..+.+-..
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~-~~~~~~-l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFART-FHTSVV-LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCB-SCEEEE-CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcc-cCCeEE-CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 6888888776543322 1111111 111122 3789999999864 468999987654221
Q ss_pred EeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 554 TLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 554 ~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
.+........+..+.|+ +++++.||.
T Consensus 505 ~~~~~R~~hs~a~ll~d-g~v~v~GG~ 530 (656)
T 1k3i_A 505 PNSIVRVYHSISLLLPD-GRVFNGGGG 530 (656)
T ss_dssp CCSSCCCTTEEEEECTT-SCEEEEECC
T ss_pred CCCCccccccHhhcCCC-cEEEecCCC
Confidence 11212222344556788 789999885
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.66 E-value=8.5e-06 Score=89.00 Aligned_cols=259 Identities=12% Similarity=0.095 Sum_probs=155.9
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCC-CCeeEEEECC--CCCeEEEEeCC----CceEEEEEECCCceEEE
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-LGVAYLAWSP--DSSHLLVVGPE----DCHELWVWNIETELLRV 385 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~sp--d~~~l~s~~~d----~~~~i~vwd~~~~~~~~ 385 (604)
+..++.++.|+.|..+|..+ ++.+-.+.... .....+..+| .+..++++... ..+.|..+|..+|+.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~t----G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKT----GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp BTEEEEECTTSEEEEEETTT----CCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCC----CCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 45677788899999999883 33333332210 0000111111 13345554432 12389999999999887
Q ss_pred EecCCCC------------------------------CCeEEEEEecCCCEEEEEecCCe-------------------E
Q psy10566 386 KLNHSPE------------------------------DSLTSCSWNRDGTKFVCGGIRGQ-------------------F 416 (604)
Q Consensus 386 ~~~~~~~------------------------------~~v~~~~~~~~~~~l~s~~~dg~-------------------i 416 (604)
.+..... .....+++.|+...++.++.++. |
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 7652110 01124688888888888887763 8
Q ss_pred EEEEc-CCCeeeeeec-----------eeEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCcccccccC----------
Q psy10566 417 YQCDI-EGQVLDSWEG-----------VRVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQE---------- 471 (604)
Q Consensus 417 ~iwd~-~~~~~~~~~~-----------~~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~---------- 471 (604)
..+|. +|+.+-.+.. .+.....+..+|+ .++.++.+|.++++|..+++.......
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 88887 5776655542 1122222334665 688899999999999988765411100
Q ss_pred ---CC------------------------CeeEEEECCCCCEEEEEe---------------------------------
Q psy10566 472 ---DH------------------------PVMSFTIDATDRLALLNV--------------------------------- 491 (604)
Q Consensus 472 ---~~------------------------~i~~~~~s~~~~~l~~~~--------------------------------- 491 (604)
.. .-..++++|+...+++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 00 011267788777766532
Q ss_pred ---cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe-eEEEE
Q psy10566 492 ---STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV-SCVAW 567 (604)
Q Consensus 492 ---~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V-~~v~~ 567 (604)
.+|.|..||+.+++.+-++.......... ....+.+++.|+.||.++.||.++|+.+..+....+.. .-+.+
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~----~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~ 508 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGT----LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF 508 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESSSCCCCE----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CCCccceEEEEeCCCCcEEEEccCCCCCcCce----eEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE
Confidence 23779999999998876665432211111 11356788899999999999999999998887653211 22344
Q ss_pred cCCCCcEEEEEe
Q psy10566 568 NPVYHQMIASVS 579 (604)
Q Consensus 568 sp~~~~~l~s~s 579 (604)
..++..+++.++
T Consensus 509 ~~~G~~yva~~~ 520 (668)
T 1kv9_A 509 ELAGRQYVAIMA 520 (668)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCEEEEEEEe
Confidence 445344565555
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.63 E-value=0.0001 Score=73.60 Aligned_cols=255 Identities=7% Similarity=-0.063 Sum_probs=157.4
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
+.+..+|.+..+++ +|+.+. ...|+..+++ .... ...+. ....+..++|++.+..|..+.... +.|+.++..
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~--g~~~--~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~-~~I~r~~~~ 103 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPH--RSEY--TLLLN-NLENAIALDFHHRRELVFWSDVTL-DRILRANLN 103 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTT--SCCE--EEEEC-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETT
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCC--CCee--EEeec-CCCceEEEEEeccccEEEEEeccC-CceEEEecC
Confidence 34455677777744 444333 3457777765 2222 22223 334578999998777777666544 389999998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C-C
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H-H 453 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d-g 453 (604)
.+........ .......+++.+.+.. +++-...+.|.+.+++|.....+.. .....+++.|.+..++.... . +
T Consensus 104 g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~ 182 (349)
T 3v64_C 104 GSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 182 (349)
T ss_dssp SCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred CCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC
Confidence 7654443332 2234678999985554 4555567899999998765444322 36789999997666665554 4 7
Q ss_pred eEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcE
Q psy10566 454 RIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 454 ~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
.|..+++.......+.. .-.....++++|++..|+.+. ..+.|..+|+........+.........+.. ..+.+
T Consensus 183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav----~~~~l 258 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV----FEDSL 258 (349)
T ss_dssp EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE----ETTEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE----ECCEE
Confidence 89999887654443333 344578999998777666654 4678999998754332223222223333432 24566
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
+++-...+.|..++..+|+.+..+........++++
T Consensus 259 y~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 259 YWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp EEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 666667888999987777777666543333344443
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=9e-05 Score=82.75 Aligned_cols=276 Identities=9% Similarity=0.095 Sum_probs=167.4
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec-----cCCCCeeEEEECCCCCeEEEEeCCCceEEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE-----GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW 376 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~-----~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw 376 (604)
..|.++...++|.+.+ |+.+ -+.+||.. +.......... -....|.++...++|...+.....| |.++
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~G---l~~~ 283 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNAN--TETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNG---IMIL 283 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETT--TTEEEC-----------CCCCEEEEEECTTSEEEEEESSSC---EEEE
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCC--CCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCC---eEEE
Confidence 5699999999887555 4444 58888876 22222221111 1245699999988886555433355 8899
Q ss_pred ECCCceEEEEec-------------CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeee------------ec
Q psy10566 377 NIETELLRVKLN-------------HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSW------------EG 431 (604)
Q Consensus 377 d~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~ 431 (604)
|..++....... .-....|.++...++|. +..|+.++-|..++........+ ..
T Consensus 284 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 284 DLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp ETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSS
T ss_pred CCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCC
Confidence 988765432111 11235688888888775 56677777788888764443333 12
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc----cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee
Q psy10566 432 VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL----QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL 507 (604)
Q Consensus 432 ~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~ 507 (604)
..|.++...++|. +..|+.++-|..||..+....... .....|.++...+++. |.+|+.++.+..+|..+++..
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEE
Confidence 3588898888877 556666667888987654332221 1245688888887776 455777777999998776543
Q ss_pred eEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC-----CCCeeEEEEcCCCCcEEEEEeCCC
Q psy10566 508 RKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH-----TRTVSCVAWNPVYHQMIASVSDDC 582 (604)
Q Consensus 508 ~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h-----~~~V~~v~~sp~~~~~l~s~s~Dg 582 (604)
. +.........+.++...+++. |..|+. +-|..||..+++........ ...|.++...++ +.+.+ |+.++
T Consensus 441 ~-~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lWi-gt~~~ 515 (781)
T 3v9f_A 441 I-IELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSE-GRFWI-GTFGG 515 (781)
T ss_dssp E-CCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTT-CCEEE-EESSS
T ss_pred E-eccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCC-CCEEE-EEcCC
Confidence 2 221111112344444445665 555555 55889998876654333222 367899999887 55544 44433
Q ss_pred cEEEECCCCC
Q psy10566 583 TVRIWGPHLN 592 (604)
Q Consensus 583 ~I~iW~~~~~ 592 (604)
-|..|+..++
T Consensus 516 Gl~~~~~~~~ 525 (781)
T 3v9f_A 516 GVGIYTPDMQ 525 (781)
T ss_dssp CEEEECTTCC
T ss_pred CEEEEeCCCC
Confidence 3777887654
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.56 E-value=1.4e-05 Score=85.51 Aligned_cols=271 Identities=12% Similarity=-0.013 Sum_probs=156.3
Q ss_pred CCeEEEEEC-CCeEEEEEe-CCCCceeEeeEEeccCCC-----------CeeEEEECCCCCe----EEEEeCCCceEEEE
Q psy10566 313 GLKLATGSK-DTTVIIWDV-DPVTFTCQHRKTLEGHTL-----------GVAYLAWSPDSSH----LLVVGPEDCHELWV 375 (604)
Q Consensus 313 g~~lasgs~-dg~i~iwd~-~~~~~~~~~~~~l~~h~~-----------~V~~l~~spd~~~----l~s~~~d~~~~i~v 375 (604)
+..++.++. ++.|.-+|. .++. .+-.+..... ....++++|.+.. +++++.++ .+..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~----~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg--~l~A 135 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGT----ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDG--NVAA 135 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS----EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTS--EEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCc----EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCC--EEEE
Confidence 334555555 777877887 6222 2222221110 0123455444445 78888887 8999
Q ss_pred EECCCceEEEEecCCCC---CCeEE-EEEecCCCEEEEEe------cCCeEEEEEc-CCCeeeeeecee-E---------
Q psy10566 376 WNIETELLRVKLNHSPE---DSLTS-CSWNRDGTKFVCGG------IRGQFYQCDI-EGQVLDSWEGVR-V--------- 434 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~l~s~~------~dg~i~iwd~-~~~~~~~~~~~~-v--------- 434 (604)
+|..+|+.+-+...... ..+.+ -.+ .++ .+++++ .+|.|+.+|. +|+.+-.+.... .
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~ 213 (599)
T 1w6s_A 136 LNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDF 213 (599)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTT
T ss_pred EECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccc
Confidence 99999998776543210 01111 111 134 555555 3799999998 577765554321 1
Q ss_pred ------------------------------EEEEEcCCCCEEEEEeCC----------------CeEEEEEcCCCccccc
Q psy10566 435 ------------------------------NCLWCRSDGKSVLAADTH----------------HRIRTYNFEHLTDSNL 468 (604)
Q Consensus 435 ------------------------------~~l~~s~~g~~l~~~~~d----------------g~I~i~d~~~~~~~~~ 468 (604)
...++.++...++.++.+ +.|..+|..+++....
T Consensus 214 ~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~ 293 (599)
T 1w6s_A 214 NIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG 293 (599)
T ss_dssp TTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE
Confidence 124566677777877665 3799999998876554
Q ss_pred ccCCC----------CeeEEEEC-CCC---CEEEEEecCCeEEEEecCCCceeeEeecccc----------ceEEE----
Q psy10566 469 LQEDH----------PVMSFTID-ATD---RLALLNVSTQGVHLWDLRDRILLRKFQGVTQ----------GQFTI---- 520 (604)
Q Consensus 469 ~~~~~----------~i~~~~~s-~~~---~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~----------~~~~i---- 520 (604)
.+... ...-+... .+| ..++.++.+|.++++|.++++.+........ ....+
T Consensus 294 ~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~ 373 (599)
T 1w6s_A 294 YQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPE 373 (599)
T ss_dssp EESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGG
T ss_pred eecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccc
Confidence 43211 11112222 567 4677788999999999999988765542110 00000
Q ss_pred -----------E-----------eeeCCCCCcEEEEE---------------------------------e------CCC
Q psy10566 521 -----------H-----------SCFGGANQDFVASG---------------------------------S------EDG 539 (604)
Q Consensus 521 -----------~-----------~~~~~~~~~~l~sg---------------------------------s------~dg 539 (604)
. ...++|+..++++. + .+|
T Consensus 374 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G 453 (599)
T 1w6s_A 374 YGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG 453 (599)
T ss_dssp GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE
T ss_pred cCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC
Confidence 0 01122333333221 1 357
Q ss_pred cEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 540 KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 540 ~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.|..||..+++.+...... .++..-..... +.+++.++.||.++.||.++++
T Consensus 454 ~l~A~D~~tG~~~W~~~~~-~~~~~g~~~ta-gg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMER-FAVWGGTMATA-GDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSBCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred eEEEEECCCCCEEeEecCC-CCccCcceEec-CCEEEEECCCCeEEEEECCCCC
Confidence 8999999999988776522 12221111223 4567779999999999999887
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.56 E-value=9.6e-06 Score=75.86 Aligned_cols=193 Identities=8% Similarity=-0.044 Sum_probs=125.8
Q ss_pred eeEEeccCCCC--eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCe
Q psy10566 339 HRKTLEGHTLG--VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQ 415 (604)
Q Consensus 339 ~~~~l~~h~~~--V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~ 415 (604)
.+.++. |... ...+.|+ ++..+.+.+.++...|+++|+.+++........ .........++++.+.... .++.
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEEeCCEEEEEEeeCCE
Confidence 445554 5433 4788998 677777777776568999999999988887643 2333333333455555554 5789
Q ss_pred EEEEEc-CCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---C---CCeeEEEECCCCCEEE
Q psy10566 416 FYQCDI-EGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---D---HPVMSFTIDATDRLAL 488 (604)
Q Consensus 416 i~iwd~-~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~---~~i~~~~~s~~~~~l~ 488 (604)
+.+||. +.+.+..+.-.. ....++++++.++.++.++.|.++|..+.+....+.- . ..++.+.+. +|+..+
T Consensus 109 v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 999999 467777665421 3344557788888887788999999998766554432 2 223456665 666554
Q ss_pred EEecCCeEEEEecCCCceeeEeeccc---------cceEEEEeeeCCCCCcEEEEEeC
Q psy10566 489 LNVSTQGVHLWDLRDRILLRKFQGVT---------QGQFTIHSCFGGANQDFVASGSE 537 (604)
Q Consensus 489 ~~~~dg~I~lwd~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~sgs~ 537 (604)
....++.|.+.|.++++.+..+.... ........++++|+++.|+..+.
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 44468899999999999988876421 11123344555676655555543
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.55 E-value=1.6e-05 Score=84.92 Aligned_cols=258 Identities=12% Similarity=0.039 Sum_probs=151.9
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC--CeeEEEECC--CCCeEEEEeC------CCceEEEEEECCCce
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL--GVAYLAWSP--DSSHLLVVGP------EDCHELWVWNIETEL 382 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~--~V~~l~~sp--d~~~l~s~~~------d~~~~i~vwd~~~~~ 382 (604)
+..++.++.|+.+..+|..++... -...+..+.. .+. -+| .+..+++++. ++ .|..+|..+|+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~--W~~~~~~~~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g--~v~a~D~~tG~ 187 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKIN--WEVEVCDPKVGSTLT---QAPFVAKDTVLMGCSGAELGVRG--AVNAFDLKTGE 187 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEE--EEEECCCGGGTCBCC---SCCEEETTEEEEECBCGGGTCCC--EEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEE--EEecCCCCCccceec---cCCEEECCEEEEEecCCccCCCC--EEEEEECCCCc
Confidence 456777888999999998732222 2222222111 111 111 1335555554 45 89999999999
Q ss_pred EEEEecCCCCC-------------------------------------CeEEEEEecCCCEEEEEecC------------
Q psy10566 383 LRVKLNHSPED-------------------------------------SLTSCSWNRDGTKFVCGGIR------------ 413 (604)
Q Consensus 383 ~~~~~~~~~~~-------------------------------------~v~~~~~~~~~~~l~s~~~d------------ 413 (604)
.+-++...... ....+++.++...++.++.+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 88766532110 00235666766677666532
Q ss_pred ----CeEEEEEc-CCCeeeeeece-----------eEEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCcccccccCC--
Q psy10566 414 ----GQFYQCDI-EGQVLDSWEGV-----------RVNCLWCRSDGK---SVLAADTHHRIRTYNFEHLTDSNLLQED-- 472 (604)
Q Consensus 414 ----g~i~iwd~-~~~~~~~~~~~-----------~v~~l~~s~~g~---~l~~~~~dg~I~i~d~~~~~~~~~~~~~-- 472 (604)
+.|..+|. +|+.+-.+... ...-+....+|+ .++.++.+|.++++|..+++........
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 35888888 56766544311 111122224674 5677888999999999887654322211
Q ss_pred ------------CCe--------------------------eEEEECCCCCEEEEEec----------------------
Q psy10566 473 ------------HPV--------------------------MSFTIDATDRLALLNVS---------------------- 492 (604)
Q Consensus 473 ------------~~i--------------------------~~~~~s~~~~~l~~~~~---------------------- 492 (604)
.++ ..++++|+...+++.+.
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 24578888887777643
Q ss_pred ---------------CCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 493 ---------------TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 493 ---------------dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
++.|..||+.+++.+-++....... . ......+..++.++.||.|+.||.++|+.+..+..
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~-~---~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAW-G---GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCC-S---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCcc-c---eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 4789999999998877665322110 0 00012355777799999999999999999988875
Q ss_pred CCCC-eeEEEEcCCCCcEEEEEeCC
Q psy10566 558 HTRT-VSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 558 h~~~-V~~v~~sp~~~~~l~s~s~D 581 (604)
.... -.-+.+..++..++++.+..
T Consensus 504 ~~~~~~~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 504 PSGGIGSPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEECC
T ss_pred CCCcEeeeEEEEECCEEEEEEECCC
Confidence 4321 12244556633444444433
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.54 E-value=7.3e-06 Score=87.66 Aligned_cols=229 Identities=8% Similarity=-0.059 Sum_probs=139.9
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCC---CCeEE-EEEecCCCEEEEEec------CCeEEEEEc-CCCeee
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPE---DSLTS-CSWNRDGTKFVCGGI------RGQFYQCDI-EGQVLD 427 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~l~s~~~------dg~i~iwd~-~~~~~~ 427 (604)
+..+++++.++ .+..+|..+|+.+........ ..+.+ ... .+..+++++. ++.|..+|. +|+.+-
T Consensus 115 ~~~v~v~~~dg--~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANG--HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTS--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCC--EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 55777777777 899999999998776653210 01111 111 2345555554 789999998 577765
Q ss_pred eeecee-E---------------------------------------EEEEEcCCCCEEEEEeCC---------------
Q psy10566 428 SWEGVR-V---------------------------------------NCLWCRSDGKSVLAADTH--------------- 452 (604)
Q Consensus 428 ~~~~~~-v---------------------------------------~~l~~s~~g~~l~~~~~d--------------- 452 (604)
.+.... . ..+++.++...++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 554321 0 124566666667666532
Q ss_pred -CeEEEEEcCCCcccccccCC----------CCeeEEEECCCCC---EEEEEecCCeEEEEecCCCceeeEeecccc---
Q psy10566 453 -HRIRTYNFEHLTDSNLLQED----------HPVMSFTIDATDR---LALLNVSTQGVHLWDLRDRILLRKFQGVTQ--- 515 (604)
Q Consensus 453 -g~I~i~d~~~~~~~~~~~~~----------~~i~~~~~s~~~~---~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~--- 515 (604)
+.|..+|..+++.....+.. ....-+....+|+ .+++++.+|.++++|..+++.+..+.....
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 35899999887765444321 1111122234674 577788899999999999988766542210
Q ss_pred ---------c-------------eEEEE-----------eeeCCCCCcEEEEEe--------------------------
Q psy10566 516 ---------G-------------QFTIH-----------SCFGGANQDFVASGS-------------------------- 536 (604)
Q Consensus 516 ---------~-------------~~~i~-----------~~~~~~~~~~l~sgs-------------------------- 536 (604)
. ...+. ...++|+..+++..+
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 0 00000 122345555555543
Q ss_pred -----------CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 537 -----------EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 537 -----------~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
.+|.|+.||..+++.+.++... ..+.+...... +.+++.++.||.|+.||.++++
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~-gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTK-GGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEET-TTEEEEECTTSEEEEEETTTCC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEEC-CCEEEEEcCCCeEEEEECCCCC
Confidence 3578999999999988877533 22322222323 4566678999999999999887
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.54 E-value=0.00017 Score=70.44 Aligned_cols=230 Identities=9% Similarity=-0.010 Sum_probs=133.9
Q ss_pred eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C-
Q psy10566 337 CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G- 414 (604)
Q Consensus 337 ~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g- 414 (604)
.+.+..+... .....++|+++++.+++-...+ .|..||..+.. ...+. ....+..+++.++|+.+++.... +
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~--~I~~~d~~g~~-~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVG--EIVSITPDGNQ-QIHAT--VEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTT--EEEEECTTCCE-EEEEE--CSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCC--eEEEECCCCce-EEEEe--CCCCceeEEEcCCCcEEEEeccCCcc
Confidence 3344455432 4578899999998666654555 89999987643 33332 23468899999999966655433 2
Q ss_pred eEEEEEc-CCCeeeeee--c-eeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccc----------c-ccCCCCeeEEE
Q psy10566 415 QFYQCDI-EGQVLDSWE--G-VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSN----------L-LQEDHPVMSFT 479 (604)
Q Consensus 415 ~i~iwd~-~~~~~~~~~--~-~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~----------~-~~~~~~i~~~~ 479 (604)
.|..+|. +++...... . .....++..+++..+++-..++.|+.+|........ . ...-.....+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 4666775 444322211 1 123445555555444444458899999976531100 0 0111233444
Q ss_pred ECCCCCEEEEEe-cCCeEEEEecCC-Cce--eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE--
Q psy10566 480 IDATDRLALLNV-STQGVHLWDLRD-RIL--LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA-- 553 (604)
Q Consensus 480 ~s~~~~~l~~~~-~dg~I~lwd~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~-- 553 (604)
+++++.++++. ..+.|..||+.. +.. ...+... . ....+...++|++.++....+.|.++|.. ++...
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~---~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-T---NIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-C---CCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-C---CCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence 78887666554 567899999875 321 1111110 0 01113335788887777778899999975 65532
Q ss_pred EeeCCCCCeeEEEEc---CCCCcEEEEEe
Q psy10566 554 TLSGHTRTVSCVAWN---PVYHQMIASVS 579 (604)
Q Consensus 554 ~l~~h~~~V~~v~~s---p~~~~~l~s~s 579 (604)
.+......+++++|. |+++.++++..
T Consensus 249 ~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 249 QAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ecccccCCceEEEEecccCCCCEEEEECC
Confidence 233333568999998 78445555544
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.51 E-value=0.00015 Score=81.07 Aligned_cols=277 Identities=9% Similarity=0.038 Sum_probs=168.6
Q ss_pred CCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-------ccCCCCeeEEEECCCCCeEEEEeCCCceE
Q psy10566 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-------EGHTLGVAYLAWSPDSSHLLVVGPEDCHE 372 (604)
Q Consensus 300 H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-------~~h~~~V~~l~~spd~~~l~s~~~d~~~~ 372 (604)
....|.++...++|. |-.|+.++-|..|+.... ........ .-....|.+++..++|...+.....|
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~G--- 384 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPP--TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGG--- 384 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCC--SCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSC---
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCC--cceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCc---
Confidence 346799999999887 455666777888887622 22211100 01235699999988887554433455
Q ss_pred EEEEECCCceEEEEec--CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-----ceeEEEEEEcCCCCE
Q psy10566 373 LWVWNIETELLRVKLN--HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-----GVRVNCLWCRSDGKS 445 (604)
Q Consensus 373 i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~v~~l~~s~~g~~ 445 (604)
+..||..++....... ......|.++...+++.. .+|+.++-+..+|........+. ...|.++...++|..
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE
Confidence 8899987654332111 123456888888777764 45777677888888655554443 236888888888774
Q ss_pred EEEEeCCCeEEEEEcCCCcccccccC------CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec-cccceE
Q psy10566 446 VLAADTHHRIRTYNFEHLTDSNLLQE------DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG-VTQGQF 518 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~-~~~~~~ 518 (604)
..++. +.+..||..+......... ...|.++..+++|... +++.++.+..||..+++.. .+.. ..-...
T Consensus 464 -wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~ 539 (781)
T 3v9f_A 464 -WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQLVR-KFNQYEGFCSN 539 (781)
T ss_dssp -EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSCEEEECTTCCEEE-EECTTTTCSCS
T ss_pred -EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCeEE-EccCCCCCCCC
Confidence 44555 6688999877554332211 3578899999888754 4555445888998766433 3321 111112
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC----CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH----TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h----~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
.+.++...++|.+.+ |+.+|.|..||..+++. ..+... ...|.++...++ +.+.++ +.+| |..+++.+.
T Consensus 540 ~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~-g~lW~~-t~~G-l~~~~~~~~ 612 (781)
T 3v9f_A 540 TINQIYRSSKGQMWL-ATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKN-GNIWAS-TNTG-ISCYITSKK 612 (781)
T ss_dssp CEEEEEECTTSCEEE-EETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSS-SCEEEE-CSSC-EEEEETTTT
T ss_pred eeEEEEECCCCCEEE-EECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCC-CCEEEE-cCCc-eEEEECCCC
Confidence 344445456776544 45577658899887653 333221 246888888887 555544 4555 556666543
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.51 E-value=4.5e-05 Score=78.51 Aligned_cols=236 Identities=14% Similarity=0.221 Sum_probs=145.9
Q ss_pred CeeEEEECC-CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-C----eEEEEEcC
Q psy10566 349 GVAYLAWSP-DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-G----QFYQCDIE 422 (604)
Q Consensus 349 ~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g----~i~iwd~~ 422 (604)
....++|+| ++..|.++... ..|+.+|..++....... .......++|+++++.++++... + .+..++.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ--HPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT--EEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCEEEECCCCCCeEEEEeCC--CcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 457899998 45566666654 389999998876554443 34568899999999966666542 1 35555555
Q ss_pred CCee--eee-eceeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEE-ecCCe
Q psy10566 423 GQVL--DSW-EGVRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLN-VSTQG 495 (604)
Q Consensus 423 ~~~~--~~~-~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~-~~dg~ 495 (604)
+... ..+ .......++++| +|..+++-..++.|..++........... .......++++|++++++++ ...+.
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 4332 222 123467788999 67766666677899999988654322222 23457789999999955554 45788
Q ss_pred EEEEecCC--Cce--eeEeeccc---c---c-------eEEEEeeeC--------CCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 496 VHLWDLRD--RIL--LRKFQGVT---Q---G-------QFTIHSCFG--------GANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 496 I~lwd~~~--~~~--~~~~~~~~---~---~-------~~~i~~~~~--------~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
|..++... +.. +..+.+.. . . ......++. .++|.+.++-...+.|+.++ .+|.
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 99988653 221 22222210 0 0 001101221 13456666666678888888 4454
Q ss_pred ceEEeeCC---------C---------CCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 551 PIATLSGH---------T---------RTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 551 ~~~~l~~h---------~---------~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.. ++.+. . .....++++|+++.++++-..+..|+..+++
T Consensus 373 v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 373 VT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 33 33221 1 2578999999547777777777888887754
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.50 E-value=0.00026 Score=71.97 Aligned_cols=241 Identities=7% Similarity=-0.016 Sum_probs=152.6
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc----eEEEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE----LLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~----~~~~~~~~~ 390 (604)
+|+.+. ...|+..+++.. ... ... .....+..++|++.+..|..+.... ..|+.+++... .....+. .
T Consensus 85 ~ll~~~-~~~I~~i~l~~~--~~~--~~~-~~~~~~~~l~~d~~~~~lywsD~~~-~~I~~~~~~g~~~~~~~~~~~~-~ 156 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRS--EYT--SLI-PNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-R 156 (400)
T ss_dssp EEEEEE-TTEEEEECTTSC--SCE--EEE-CSCSCEEEEEEETTTTEEEEEETTT-TEEEEEEC------CCCEEEEC-S
T ss_pred eeEEec-cceeEEEccCCc--cee--Eec-cccCcceEEeeeeccCceEEEecCC-CeEEEEEcccCCCCCcceEEEe-C
Confidence 444443 467888887722 211 222 2445788999999777777666544 38999998752 1222222 2
Q ss_pred CCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCc
Q psy10566 391 PEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLT 464 (604)
Q Consensus 391 ~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~ 464 (604)
.......+++.+. ++.+++-...+.|.+.++++.....+.. .....+++.|.+..++.... .+.|...++....
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 236 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence 3345788999984 4455555667899999998765544432 35889999997777766653 3689999987655
Q ss_pred ccccccC-CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeec--cccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 465 DSNLLQE-DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQG--VTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 465 ~~~~~~~-~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
...+... -.....+++++++..|+.+. ..+.|..+|+........... .......+.. ..+.++++-...+.
T Consensus 237 ~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v----~~~~lywtd~~~~~ 312 (400)
T 3p5b_L 237 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV----FEDKVFWTDIINEA 312 (400)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE----ETTEEEEEESSSCS
T ss_pred cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE----eCCEEEEecCCCCe
Confidence 4444332 35678999998877777665 467899999865433322222 1222333322 24556677777889
Q ss_pred EEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 541 VYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
|..+|..+|+.+..+........++..
T Consensus 313 V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 313 IFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEEcCCCCceEEEecCCCCCceEEE
Confidence 999998888887777654444555543
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=8.7e-05 Score=82.30 Aligned_cols=252 Identities=10% Similarity=0.040 Sum_probs=130.4
Q ss_pred cCCC-cEEEEEEc-CCCCeEEEEEC-CC----eEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc-
Q psy10566 299 DHCD-EVWFCKFS-PDGLKLATGSK-DT----TVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC- 370 (604)
Q Consensus 299 ~H~~-~V~~v~fs-pdg~~lasgs~-dg----~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~- 370 (604)
+|.- .+...+|| |||++||.+.. +| +|+++|+..+. .. ....+. .....++|+|||+.|+....+..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-~~-l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS-QT-IADKVS---GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT-CC-CCCCEE---EECSCCEECSSTTEEEEEEECTTC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC-Ee-CCcccc---CceeeEEEecCCCEEEEEEECCCC
Confidence 4553 68889999 99998886543 22 59999998330 10 001111 12356889999998888776531
Q ss_pred --eEEEEEECCCceE--EEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEE
Q psy10566 371 --HELWVWNIETELL--RVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSV 446 (604)
Q Consensus 371 --~~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l 446 (604)
..|+.+++.++.. ...+..........+.|+|||++|+..+.++
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-------------------------------- 292 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-------------------------------- 292 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS--------------------------------
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC--------------------------------
Confidence 2688899877631 1222212223456777888888777654321
Q ss_pred EEEeCCCeEEEEEcCCCc--c--ccccc-CCCCeeEEEECCCCCEEEEEecC----CeEEEEecCCCceeeE-eeccccc
Q psy10566 447 LAADTHHRIRTYNFEHLT--D--SNLLQ-EDHPVMSFTIDATDRLALLNVST----QGVHLWDLRDRILLRK-FQGVTQG 516 (604)
Q Consensus 447 ~~~~~dg~I~i~d~~~~~--~--~~~~~-~~~~i~~~~~s~~~~~l~~~~~d----g~I~lwd~~~~~~~~~-~~~~~~~ 516 (604)
....|.++|+.+.. . ..+.. ......++.|+..+.+++.+..+ ..|..+|+.++..... +..+...
T Consensus 293 ----~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~ 368 (751)
T 2xe4_A 293 ----ETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED 368 (751)
T ss_dssp ----SCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS
T ss_pred ----CCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC
Confidence 11234455554431 1 11111 12334444444333334444333 2577778765322222 2223222
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCc--EEEEeC-------CCCcceEEeeCC-CCCeeEEEE----cCCCCcEEEEEeCC-
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGK--VYIWHV-------KRELPIATLSGH-TRTVSCVAW----NPVYHQMIASVSDD- 581 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~--I~iwd~-------~~~~~~~~l~~h-~~~V~~v~~----sp~~~~~l~s~s~D- 581 (604)
. .+..... ..+.++++...+|. |+++|+ .+++....+... ...+..+.+ ++++..++++.+..
T Consensus 369 ~-~l~~~~~-~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~ 446 (751)
T 2xe4_A 369 V-FMESIAV-RSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLA 446 (751)
T ss_dssp E-EEEEEEE-CSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETT
T ss_pred c-EEEEEEE-ECCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCC
Confidence 1 2222222 23456677777875 555665 344314444321 122344433 34545566665544
Q ss_pred --CcEEEECCCCCC
Q psy10566 582 --CTVRIWGPHLNT 593 (604)
Q Consensus 582 --g~I~iW~~~~~~ 593 (604)
+.+..+++.+++
T Consensus 447 ~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 447 TPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEEEEEECTTTCC
T ss_pred CCCEEEEEECCCCc
Confidence 457777776654
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.49 E-value=0.00031 Score=68.93 Aligned_cols=229 Identities=8% Similarity=0.003 Sum_probs=142.2
Q ss_pred EEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC----ceEEEEecCCC
Q psy10566 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSP 391 (604)
Q Consensus 316 lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~----~~~~~~~~~~~ 391 (604)
|+.+. ...|+..+++.. .....+. ....+..++|++.+..|+.+...+ ..|..+++.+ ......+. ..
T Consensus 4 ll~~~-~~~I~~i~~~~~----~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~-~~I~~~~~~g~~~~~~~~~~~~-~~ 75 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRS----EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-RD 75 (316)
T ss_dssp EEEEC-BSSEEEEETTSC----CCEEEEC-SCSSEEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEEEC-SS
T ss_pred EEEEC-CCeEEEEECCCc----ceEehhc-CCCceEEEEEEeCCCEEEEEECCC-CcEEEEECCCCCCCcccEEEEe-CC
Confidence 44433 356888888722 1222232 345678999999877776666553 3899999876 22222222 12
Q ss_pred CCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCcc
Q psy10566 392 EDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTH--HRIRTYNFEHLTD 465 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~d--g~I~i~d~~~~~~ 465 (604)
-.....+++.+.+..+ ++-...+.|.++++++.....+. ......+++.|.+..++.+... +.|..++......
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 2346789998755544 55566789999999876554432 2367899999977766666543 6898888865433
Q ss_pred ccccc-CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEee-c--cccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 466 SNLLQ-EDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQ-G--VTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 466 ~~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~-~--~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
..+.. .-.....+++++++..|+.+. ..+.|..+|+... ..+.+. . .......+.. ..+.++++-...+.
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav----~~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAV----FEDKVFWTDIINEA 230 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEE----ETTEEEEEETTTTE
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEE----ECCEEEEEECCCCe
Confidence 32322 345678999998877776655 4578999998743 333332 1 1122233322 24566667767889
Q ss_pred EEEEeCCCCcceEEeeC
Q psy10566 541 VYIWHVKRELPIATLSG 557 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~ 557 (604)
|..++..+|+.+..+..
T Consensus 231 V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 231 IFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEEETTTCCCCEEEEC
T ss_pred EEEEeCCCCcceEEEec
Confidence 99999888877766654
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.48 E-value=0.00013 Score=73.87 Aligned_cols=252 Identities=7% Similarity=-0.066 Sum_probs=156.6
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.-.|.+..+.+ +|+.+. ...|+..++. .... ..... ....+..++|.+.+..|+.+...+ +.|+.++...+.
T Consensus 78 ~~~C~~~~~~~-~l~~~~-~~~I~~i~~~--~~~~--~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~-~~I~r~~~~g~~ 149 (386)
T 3v65_B 78 RRSCKALGPEP-VLLFAN-RIDIRQVLPH--RSEY--TLLLN-NLENAIALDFHHRRELVFWSDVTL-DRILRANLNGSN 149 (386)
T ss_dssp SSCEEECSSCC-EEEEEC-BSCEEEECTT--SCCC--EEEEC-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCC
T ss_pred CCeECCccccc-eeEeec-CccceeeccC--CCcE--EEEec-CCCccEEEEEecCCCeEEEEeCCC-CcEEEEecCCCC
Confidence 34455655533 444433 4567777776 2222 22222 334588999998777777666544 389999998776
Q ss_pred EEEEecCCCCCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C-CeEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H-HRIR 456 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d-g~I~ 456 (604)
....+.. .......+++.+.+.. +++-...+.|.+.++++.....+.. .....+++.|.+..++.+.. . +.|.
T Consensus 150 ~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 150 VEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred cEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 4443332 2234577899875554 4555567789999998765443322 36789999987776666654 3 6898
Q ss_pred EEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEE
Q psy10566 457 TYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534 (604)
Q Consensus 457 i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 534 (604)
.++........+.. .-.....++++|++..|+.+. ..+.|..+|+........+.........+.. ..+.++++
T Consensus 229 r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav----~~~~ly~t 304 (386)
T 3v65_B 229 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV----FEDSLYWT 304 (386)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE----ETTEEEEE
T ss_pred EEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE----ECCEEEEe
Confidence 88887654444333 234578999998776666554 4678999998654333223222223333332 34566677
Q ss_pred EeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEE
Q psy10566 535 GSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 535 gs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~ 567 (604)
-...+.|..+|..+|+.+..+........++++
T Consensus 305 d~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp ETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred eCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 777889999998788877777654344445544
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.43 E-value=4e-05 Score=82.00 Aligned_cols=262 Identities=10% Similarity=0.016 Sum_probs=152.0
Q ss_pred EEEcCCCCe----EEEEECCCeEEEEEeCCCCceeEeeEEeccCC--CCeeE-EEECCCCCeEEEEeC------CCceEE
Q psy10566 307 CKFSPDGLK----LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT--LGVAY-LAWSPDSSHLLVVGP------EDCHEL 373 (604)
Q Consensus 307 v~fspdg~~----lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~--~~V~~-l~~spd~~~l~s~~~------d~~~~i 373 (604)
++++|.+.. ++.++.|+.+.-+|..++.... ...+..+. ..+.+ ... -++ .+++++. ++ .|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W--~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g--~v 184 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVW--KVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRG--YL 184 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEE--EEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCC--EE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEE--eecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCC--eE
Confidence 344444444 7788889999999987332222 22222211 01111 111 134 4555442 45 89
Q ss_pred EEEECCCceEEEEecCCCCC------------------------------------Ce-EEEEEecCCCEEEEEecC---
Q psy10566 374 WVWNIETELLRVKLNHSPED------------------------------------SL-TSCSWNRDGTKFVCGGIR--- 413 (604)
Q Consensus 374 ~vwd~~~~~~~~~~~~~~~~------------------------------------~v-~~~~~~~~~~~l~s~~~d--- 413 (604)
+.+|..+|+.+-++...... .+ ...++.++...++.++.+
T Consensus 185 ~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p 264 (599)
T 1w6s_A 185 TAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP 264 (599)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred EEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc
Confidence 99999999988766532211 00 134566777777777665
Q ss_pred -------------CeEEEEEc-CCCeeeeeece-----------eEEEEEEc-CCC---CEEEEEeCCCeEEEEEcCCCc
Q psy10566 414 -------------GQFYQCDI-EGQVLDSWEGV-----------RVNCLWCR-SDG---KSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 414 -------------g~i~iwd~-~~~~~~~~~~~-----------~v~~l~~s-~~g---~~l~~~~~dg~I~i~d~~~~~ 464 (604)
+.|..+|. +|+..-.+... ...-+... .+| ..++.++.+|.++++|..+++
T Consensus 265 ~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 265 WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCC
Confidence 37888888 46665544321 01112222 467 467778899999999998876
Q ss_pred ccccccC--------------CCC--------------------------eeEEEECCCCCEEEEEe-------------
Q psy10566 465 DSNLLQE--------------DHP--------------------------VMSFTIDATDRLALLNV------------- 491 (604)
Q Consensus 465 ~~~~~~~--------------~~~--------------------------i~~~~~s~~~~~l~~~~------------- 491 (604)
....... ..+ -..++++|+...+++..
T Consensus 345 ~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 424 (599)
T 1w6s_A 345 LVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLP 424 (599)
T ss_dssp EEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCC
T ss_pred EeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccccc
Confidence 5432211 001 12456777766665532
Q ss_pred --------------------------cCCeEEEEecCCCceeeEeeccccce-EEEEeeeCCCCCcEEEEEeCCCcEEEE
Q psy10566 492 --------------------------STQGVHLWDLRDRILLRKFQGVTQGQ-FTIHSCFGGANQDFVASGSEDGKVYIW 544 (604)
Q Consensus 492 --------------------------~dg~I~lwd~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~sgs~dg~I~iw 544 (604)
..|.+..||+.+++.+-+........ ..+ ...+.+++.|+.||.++.|
T Consensus 425 ~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~-----~tagg~vf~gt~dg~l~A~ 499 (599)
T 1w6s_A 425 YKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTM-----ATAGDLVFYGTLDGYLKAR 499 (599)
T ss_dssp CCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCE-----EETTTEEEEECTTSEEEEE
T ss_pred ccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcce-----EecCCEEEEECCCCeEEEE
Confidence 24678999999998776654211100 001 1245678889999999999
Q ss_pred eCCCCcceEEeeCCCCCe-eEEEEcCCCCcEEEEEe
Q psy10566 545 HVKRELPIATLSGHTRTV-SCVAWNPVYHQMIASVS 579 (604)
Q Consensus 545 d~~~~~~~~~l~~h~~~V-~~v~~sp~~~~~l~s~s 579 (604)
|.++|+.+.+++...+.+ .-+.|..++..++++.+
T Consensus 500 D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 500 DSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 999999998886543222 23555566444555543
No 268
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.42 E-value=5.3e-05 Score=70.21 Aligned_cols=170 Identities=10% Similarity=-0.041 Sum_probs=113.6
Q ss_pred eEeeEEeccCC--CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC
Q psy10566 337 CQHRKTLEGHT--LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414 (604)
Q Consensus 337 ~~~~~~l~~h~--~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 414 (604)
.+.+.++. |. .-...+.|++ +..+.+.+.++...|+.+|+.+++............-..+++. .++.++..-.++
T Consensus 9 ~~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~ 85 (243)
T 3mbr_X 9 YRVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSS
T ss_pred eEEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCC
Confidence 34555553 54 3456899987 5666677776556899999999999888764322222334443 233444455678
Q ss_pred eEEEEEc-CCCeeeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccC---C---CCeeEEEECCCCCEE
Q psy10566 415 QFYQCDI-EGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE---D---HPVMSFTIDATDRLA 487 (604)
Q Consensus 415 ~i~iwd~-~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~---~---~~i~~~~~s~~~~~l 487 (604)
.+.+||. +.+.+..+.... ....+.++++.++++..++.|.++|..+.+....+.- . ..++.+.+. +|+..
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 9999999 466666665321 2334456788888888899999999998766554432 1 234455554 56544
Q ss_pred EEEecCCeEEEEecCCCceeeEee
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
+....+..|.+.|.++++.+..+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEE
T ss_pred EEECCCCeEEEEECCCCCEEEEEE
Confidence 444468899999999999988876
No 269
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.42 E-value=2.9e-05 Score=72.60 Aligned_cols=184 Identities=11% Similarity=0.023 Sum_probs=120.7
Q ss_pred cceeecccCCC--cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeE--EEECCCCCeEEEEe
Q psy10566 292 ETTQVLNDHCD--EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAY--LAWSPDSSHLLVVG 366 (604)
Q Consensus 292 ~~~~~l~~H~~--~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~--l~~spd~~~l~s~~ 366 (604)
+.++++ .|.. -...+.|+ ++.++.+.+.+|.|+++|+.+ ++....+ .. .... +++ +++.|....
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~T----gkv~~~~l~~---~~FgeGit~--~g~~Ly~lt 112 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLES----AQPVWMERLG---NIFAEGLAS--DGERLYQLT 112 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSC----SSCSEEEECT---TCCEEEEEE--CSSCEEEEE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCC----CcEEeEECCC---CcceeEEEE--eCCEEEEEE
Confidence 445555 3443 34788888 466777888889999999983 3333333 32 2333 444 445555555
Q ss_pred CCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCeeeeeec----e---eEEEEE
Q psy10566 367 PEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----V---RVNCLW 438 (604)
Q Consensus 367 ~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~----~---~v~~l~ 438 (604)
..+ +.+.+||..+.+.+.++.....+ ..++ ++++.|+.+..++.|.++|.. .+.+..+.- . .++.+.
T Consensus 113 w~~-~~v~V~D~~Tl~~~~ti~~~~eG--wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 113 WTE-GLLFTWSGMPPQRERTTRYSGEG--WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp SSS-CEEEEEETTTTEEEEEEECSSCC--CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred ccC-CEEEEEECCcCcEEEEEeCCCce--eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccE
Confidence 443 38999999999999888754322 3333 578888888788999999985 455554432 1 346666
Q ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCcccccccC--------------CCCeeEEEECCCCCEEEEEec
Q psy10566 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE--------------DHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 439 ~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~--------------~~~i~~~~~s~~~~~l~~~~~ 492 (604)
+. +|...+..-.+..|.+.|..+++....+.. ..-.+.++++|+++.|++.+.
T Consensus 188 ~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 188 CA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 66 675554444678999999998865544331 235689999998877776654
No 270
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.41 E-value=0.0001 Score=78.87 Aligned_cols=260 Identities=12% Similarity=0.093 Sum_probs=150.8
Q ss_pred CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCC--Cee---EEEEC-CCCC-eEEEEeC------CCceEEEEEECC
Q psy10566 313 GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL--GVA---YLAWS-PDSS-HLLVVGP------EDCHELWVWNIE 379 (604)
Q Consensus 313 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~--~V~---~l~~s-pd~~-~l~s~~~------d~~~~i~vwd~~ 379 (604)
+..++.++.|+.|.-+|..++.... ......+.. .+. .+.=. .+++ .+++++. ++ .|+.+|..
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W--~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g--~v~alD~~ 192 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVW--KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVG--RLFARDPD 192 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEE--EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBC--EEEEECTT
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEe--eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCC--EEEEEECC
Confidence 4567778889999999988322222 222222110 111 11101 1233 4555442 44 89999999
Q ss_pred CceEEEEecCCCC----------------------------------------CCeEEEEEecCCCEEEEEec-------
Q psy10566 380 TELLRVKLNHSPE----------------------------------------DSLTSCSWNRDGTKFVCGGI------- 412 (604)
Q Consensus 380 ~~~~~~~~~~~~~----------------------------------------~~v~~~~~~~~~~~l~s~~~------- 412 (604)
+|+.+-....... ..-..+++.|+...++.+..
T Consensus 193 tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~ 272 (582)
T 1flg_A 193 TGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNT 272 (582)
T ss_dssp TCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCG
T ss_pred CCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccC
Confidence 9987765432100 00023566677777776653
Q ss_pred -------------C----CeEEEEEc-CCCeeeeeec--e---------eEEEEEEc-CCCC---EEEEEeCCCeEEEEE
Q psy10566 413 -------------R----GQFYQCDI-EGQVLDSWEG--V---------RVNCLWCR-SDGK---SVLAADTHHRIRTYN 459 (604)
Q Consensus 413 -------------d----g~i~iwd~-~~~~~~~~~~--~---------~v~~l~~s-~~g~---~l~~~~~dg~I~i~d 459 (604)
| +.|..+|. +|+..-.+.. + ...-+... .+|+ .++.++.+|.++++|
T Consensus 273 ~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 273 WARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred cccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 57888998 5777655532 1 01111221 4674 678899999999999
Q ss_pred cCCCcccccccCCC----------------------------------------------CeeEEEECCCCCEEEEEe--
Q psy10566 460 FEHLTDSNLLQEDH----------------------------------------------PVMSFTIDATDRLALLNV-- 491 (604)
Q Consensus 460 ~~~~~~~~~~~~~~----------------------------------------------~i~~~~~s~~~~~l~~~~-- 491 (604)
..+++......... .-..++++|+...+++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 88765432211100 011356677666666543
Q ss_pred -------------------------------cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc
Q psy10566 492 -------------------------------STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540 (604)
Q Consensus 492 -------------------------------~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~ 540 (604)
.+|.|..||+.+++.+-++.......... + ...+.+++.|+.||.
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~--~--~tagglvf~g~~dg~ 508 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGV--L--ATAGNLVFTGTGDGY 508 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCC--E--EETTTEEEEECTTSE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccc--e--EeCCCEEEEECCCCc
Confidence 25789999999998876655322110000 0 123567888999999
Q ss_pred EEEEeCCCCcceEEeeCCCCCe-eEEEEcCCCCcEEEEEeC
Q psy10566 541 VYIWHVKRELPIATLSGHTRTV-SCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 541 I~iwd~~~~~~~~~l~~h~~~V-~~v~~sp~~~~~l~s~s~ 580 (604)
++.||.++|+.+..++...+.+ .-+.|..++..++++.+.
T Consensus 509 l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 509 FKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp EEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred EEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 9999999999999887654322 226666674445555443
No 271
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.35 E-value=0.0014 Score=64.51 Aligned_cols=273 Identities=8% Similarity=-0.005 Sum_probs=147.9
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEE-eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKT-LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~-l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..+.+|.|.+++..+++ +.+|.| |...+...+.+.+.. .......+.+|.|.+ + .+++++..+ .|+. ..+.
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g--~i~~-S~Dg 107 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPP--IMLH-TTDG 107 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETT--EEEE-ESST
T ss_pred CcEEEEEECCCCcEEEE-cCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCC--eEEE-ECCC
Confidence 47999999888887775 457765 333322233433321 112344688999986 3 344455555 3433 3333
Q ss_pred ceEEEEecC--CCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCCCeE
Q psy10566 381 ELLRVKLNH--SPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTHHRI 455 (604)
Q Consensus 381 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~dg~I 455 (604)
|+.-..... .....+..+.+.+++..++++ .+|.|..-.=.|+....... ..+..+.+.+++..++++...+..
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 443222221 123457788887777655554 45654332112443333221 257788999988877666444333
Q ss_pred EEEEc--CCCcccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc-ccceEEEEeeeCCCCCcEE
Q psy10566 456 RTYNF--EHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV-TQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 456 ~i~d~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l 532 (604)
+-.|- .+-... .......+..+.+.+++..+ +.+.+|.+++.+...++....+... ......+..+.+.+++.++
T Consensus 187 ~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 187 STWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp EEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred EEeCCCCCceeEC-CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 33442 111111 11234578889999988765 4456787777643334333322211 0000112223334566666
Q ss_pred EEEeCCCcEEEEeCCCCcceEEeeC---CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 533 ASGSEDGKVYIWHVKRELPIATLSG---HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~~~~~~~~l~~---h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
+++ .+|.| .+..+.|+.-..+.. +...+.++.|.++ ..++.++.+|.|.-++-
T Consensus 265 ~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~--~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 265 LAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP--DQGFILGQKGILLRYVT 320 (327)
T ss_dssp EEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET--TEEEEECSTTEEEEECC
T ss_pred EEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC--CceEEEcCCceEEEEcC
Confidence 665 47777 455565655555542 3456889999754 45667788998877765
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.33 E-value=0.00021 Score=70.16 Aligned_cols=228 Identities=7% Similarity=-0.054 Sum_probs=141.2
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE-EEecCCCCCCeEEEEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR-VKLNHSPEDSLTSCSW 400 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~ 400 (604)
...|+..+++....... ..+. ....+.+++|.+.+..|..+...+ ..|+.++...+... ..+. ..-.....+++
T Consensus 12 ~~~I~~i~l~~~~~~~~--~~~~-~~~~~~~ld~d~~~~~lyw~D~~~-~~I~r~~~~g~~~~~~~~~-~~l~~p~glav 86 (318)
T 3sov_A 12 RRDLRLVDATNGKENAT--IVVG-GLEDAAAVDFVFSHGLIYWSDVSE-EAIKRTEFNKTESVQNVVV-SGLLSPDGLAC 86 (318)
T ss_dssp EEEEEEEETTCTTSCCE--EEEE-EEEEEEEEEEEGGGTEEEEEETTT-TEEEEEETTSSSCCCEEEE-ECCSCCCEEEE
T ss_pred cCeEEEEECCCCceEEE--EEec-CCCccEEEEEEeCCCEEEEEECCC-CcEEEEEccCCCceEEEEc-CCCCCccEEEE
Confidence 45788888873221111 1111 123467899998766666665544 38999998776321 1111 11234678899
Q ss_pred ecCC-CEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccccc-CCC
Q psy10566 401 NRDG-TKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNLLQ-EDH 473 (604)
Q Consensus 401 ~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~~~-~~~ 473 (604)
.+.+ ..+++-...+.|.+++++|.....+. ......+++.|.+..++.+.. .+.|..++........+.. .-.
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~ 166 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 166 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 8754 45555556789999999876544442 135789999997777766663 5789998887544333332 234
Q ss_pred CeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 474 PVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
....+++++++..|+.+. ..+.|..+|+..........+.......+.. ..+.++++-...+.|..++..+|+..
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav----~~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL----FEDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE----ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE----eCCEEEEEecCCCeEEEEECCCCCce
Confidence 578999999777666654 4678999998653322222222233333332 13456666667889999999888877
Q ss_pred EEeeCC
Q psy10566 553 ATLSGH 558 (604)
Q Consensus 553 ~~l~~h 558 (604)
..+...
T Consensus 243 ~~i~~~ 248 (318)
T 3sov_A 243 REIHSD 248 (318)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 666543
No 273
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.31 E-value=0.00012 Score=78.34 Aligned_cols=230 Identities=9% Similarity=0.031 Sum_probs=137.7
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCC---CeE-EEEEec---CCC-EEEEEec------CCeEEEEEc-CC
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPED---SLT-SCSWNR---DGT-KFVCGGI------RGQFYQCDI-EG 423 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~---~v~-~~~~~~---~~~-~l~s~~~------dg~i~iwd~-~~ 423 (604)
+..+++++.++ .|..+|..+|+.+-........ .+. .-.... +++ .+++++. ++.|..+|. +|
T Consensus 117 ~~~v~~~t~dg--~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDA--SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTT--EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCC--EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 45677777787 8999999999987766532210 111 111111 233 5666543 789999998 57
Q ss_pred Ceeeeeecee--E-----------------------------------------EEEEEcCCCCEEEEEeC---------
Q psy10566 424 QVLDSWEGVR--V-----------------------------------------NCLWCRSDGKSVLAADT--------- 451 (604)
Q Consensus 424 ~~~~~~~~~~--v-----------------------------------------~~l~~s~~g~~l~~~~~--------- 451 (604)
+.+-...... + ...++.++...++.+..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 6654433210 0 12355566677776663
Q ss_pred -----------C----CeEEEEEcCCCcccccccCC-----------CCeeEEEEC-CCCC---EEEEEecCCeEEEEec
Q psy10566 452 -----------H----HRIRTYNFEHLTDSNLLQED-----------HPVMSFTID-ATDR---LALLNVSTQGVHLWDL 501 (604)
Q Consensus 452 -----------d----g~I~i~d~~~~~~~~~~~~~-----------~~i~~~~~s-~~~~---~l~~~~~dg~I~lwd~ 501 (604)
| +.|..+|..+++.....+.. .++. +... .+|+ .++.++.+|.++++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 58999999988776554321 1121 2221 4664 7888999999999999
Q ss_pred CCCceeeEeecccc------------c-------------------eEEEE-----------eeeCCCCCcEEEEEe---
Q psy10566 502 RDRILLRKFQGVTQ------------G-------------------QFTIH-----------SCFGGANQDFVASGS--- 536 (604)
Q Consensus 502 ~~~~~~~~~~~~~~------------~-------------------~~~i~-----------~~~~~~~~~~l~sgs--- 536 (604)
.+++.+..+..... . ...+. ...++|+...+++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 99988766543210 0 00000 011223333333322
Q ss_pred ------------------------------CCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE
Q psy10566 537 ------------------------------EDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586 (604)
Q Consensus 537 ------------------------------~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i 586 (604)
.+|.|+.||..+|+.+.+...+. ++..-..... +.+++.++.||.++.
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~ta-gglvf~g~~dg~l~A 511 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATA-GNLVFTGTGDGYFKA 511 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEET-TTEEEEECTTSEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeC-CCEEEEECCCCcEEE
Confidence 26889999999999887766432 2221111122 457777999999999
Q ss_pred ECCCCCC
Q psy10566 587 WGPHLNT 593 (604)
Q Consensus 587 W~~~~~~ 593 (604)
||.++++
T Consensus 512 ~D~~tG~ 518 (582)
T 1flg_A 512 FDAKSGK 518 (582)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9999887
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.30 E-value=0.0011 Score=65.90 Aligned_cols=233 Identities=6% Similarity=-0.064 Sum_probs=142.5
Q ss_pred eeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCeeee
Q psy10566 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEGQVLDS 428 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~ 428 (604)
.+|.+..+ ..+|+.+... .|+..++.......... ....+..++|++....|+.+ ...+.|..+++++.....
T Consensus 36 ~~C~~~~~-~~~ll~~~~~---~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 36 RSCKALGP-EPVLLFANRI---DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp SCEEESSS-CCEEEEECBS---CEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred Cccccccc-CceeEeeccc---ceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 34555555 3355554444 48888887765544443 23458899999866655544 467889999997765444
Q ss_pred eec---eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEec-C-CeEEEEec
Q psy10566 429 WEG---VRVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVS-T-QGVHLWDL 501 (604)
Q Consensus 429 ~~~---~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-d-g~I~lwd~ 501 (604)
+.. .....+++.+.+..++ +-...+.|.+++........... .......++++|.+..|+.+.. . +.|..+++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 322 2467889987655554 44556889999987654443332 3356789999997766665544 4 77888887
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeC
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSD 580 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~ 580 (604)
............-... ..+.++++ +.+.++-+..+.|..+|+........+........++++. . +.++++-..
T Consensus 190 dG~~~~~~~~~~~~~P---nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~-~~ly~td~~ 264 (349)
T 3v64_C 190 DGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-E-DSLYWTDWH 264 (349)
T ss_dssp TSCSCEESCCSSCSCE---EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-T-TEEEEEETT
T ss_pred CCCCcEEEEECCCCCc---ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-C-CEEEEecCC
Confidence 6532222111111111 22334454 4455555567889999987544333344444567788884 3 567777777
Q ss_pred CCcEEEECCCCCC
Q psy10566 581 DCTVRIWGPHLNT 593 (604)
Q Consensus 581 Dg~I~iW~~~~~~ 593 (604)
.+.|...+..++.
T Consensus 265 ~~~V~~~~~~~G~ 277 (349)
T 3v64_C 265 TKSINSANKFTGK 277 (349)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEEccCCC
Confidence 7888888755544
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.29 E-value=0.00065 Score=68.71 Aligned_cols=232 Identities=6% Similarity=-0.068 Sum_probs=143.8
Q ss_pred eEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCeeeee
Q psy10566 351 AYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV-CGGIRGQFYQCDIEGQVLDSW 429 (604)
Q Consensus 351 ~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~ 429 (604)
.|.+..+ ..+|+.+... .|+.+++.......... ....+..++|++.+..|+ +-...+.|..+++++.....+
T Consensus 80 ~C~~~~~-~~~l~~~~~~---~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRI---DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp CEEECSS-CCEEEEECBS---CEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred eECCccc-cceeEeecCc---cceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 4444445 3455555544 48889988766544443 234588999998655555 445668999999987654443
Q ss_pred ec---eeEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEec-C-CeEEEEecC
Q psy10566 430 EG---VRVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVS-T-QGVHLWDLR 502 (604)
Q Consensus 430 ~~---~~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-d-g~I~lwd~~ 502 (604)
.. .....+++.+.+..|+ +-...+.|.++++.......+.. .......++++|.+..|+.+.. . +.|..+++.
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 22 2456788887655554 44556789998887654433333 2356789999997777666654 3 678888876
Q ss_pred CCceeeEeeccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCC
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDD 581 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~D 581 (604)
................. +.++++ +.+.++-+..+.|..+|+........+........++++. . +.++++-...
T Consensus 234 G~~~~~~~~~~~~~PnG---lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~-~~ly~td~~~ 308 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNG---LTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-E-DSLYWTDWHT 308 (386)
T ss_dssp SCSCEEEECSSCSCEEE---EEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-T-TEEEEEETTT
T ss_pred CCCcEEEEECCCCCeee---EEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-C-CEEEEeeCCC
Confidence 54332222211111222 333444 4455555567889999987544333444344567888884 3 5777777778
Q ss_pred CcEEEECCCCCC
Q psy10566 582 CTVRIWGPHLNT 593 (604)
Q Consensus 582 g~I~iW~~~~~~ 593 (604)
+.|..++..++.
T Consensus 309 ~~V~~~~~~~G~ 320 (386)
T 3v65_B 309 KSINSANKFTGK 320 (386)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 888888855544
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.28 E-value=0.0017 Score=63.66 Aligned_cols=221 Identities=5% Similarity=-0.062 Sum_probs=136.9
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCC----Ceeee-ee-c-e
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEG----QVLDS-WE-G-V 432 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~----~~~~~-~~-~-~ 432 (604)
+|+.+.... |+..|+.+......+. ....+..++|++.+..++.+ ...+.|..+++++ ..... +. + .
T Consensus 3 ~ll~~~~~~---I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTNRHE---VRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp EEEEECBSS---EEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred EEEEECCCe---EEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 455555554 8999998876555443 23568899999876555544 4568999999876 32222 22 1 2
Q ss_pred eEEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCccccccc-CCCCeeEEEECCCCCEEEEEecC--CeEEEEecCCCceee
Q psy10566 433 RVNCLWCRSDGKSVL-AADTHHRIRTYNFEHLTDSNLLQ-EDHPVMSFTIDATDRLALLNVST--QGVHLWDLRDRILLR 508 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~-~~~~dg~I~i~d~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~d--g~I~lwd~~~~~~~~ 508 (604)
....+++.+.+..++ +-...+.|.+++........+.. .......++++|.+..++.+... +.|..+++... ...
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeE
Confidence 567889987555554 44567899999987654433333 34567899999977766666543 68888887543 333
Q ss_pred Eee-ccccceEEEEeeeCCCCCc-EEEEEeCCCcEEEEeCCCCcceEEe-eC--CCCCeeEEEEcCCCCcEEEEEeCCCc
Q psy10566 509 KFQ-GVTQGQFTIHSCFGGANQD-FVASGSEDGKVYIWHVKRELPIATL-SG--HTRTVSCVAWNPVYHQMIASVSDDCT 583 (604)
Q Consensus 509 ~~~-~~~~~~~~i~~~~~~~~~~-~l~sgs~dg~I~iwd~~~~~~~~~l-~~--h~~~V~~v~~sp~~~~~l~s~s~Dg~ 583 (604)
.+. ..-.. ...+.+++++. +.++-+..+.|..+|..... ...+ .. .-....++++.. +.++++-...+.
T Consensus 157 ~~~~~~~~~---P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~~--~~ly~~d~~~~~ 230 (316)
T 1ijq_A 157 SLVTENIQW---PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEA 230 (316)
T ss_dssp EEECSSCSC---EEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET--TEEEEEETTTTE
T ss_pred EEEECCCCC---ceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEEC--CEEEEEECCCCe
Confidence 222 11111 22233445544 44555567899999987433 3333 22 234567888853 577777777888
Q ss_pred EEEECCCCCC
Q psy10566 584 VRIWGPHLNT 593 (604)
Q Consensus 584 I~iW~~~~~~ 593 (604)
|..++..+++
T Consensus 231 V~~~~~~~g~ 240 (316)
T 1ijq_A 231 IFSANRLTGS 240 (316)
T ss_dssp EEEEETTTCC
T ss_pred EEEEeCCCCc
Confidence 9988876654
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.28 E-value=0.00056 Score=64.24 Aligned_cols=203 Identities=12% Similarity=0.124 Sum_probs=130.3
Q ss_pred EEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEE
Q psy10566 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420 (604)
Q Consensus 341 ~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 420 (604)
+.+.+-...+..++|+|++..|+++.... +.|...|.. ++....+..........+++.+++.++++.-.++.+.+++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~-~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKP-AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETT-EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCC-CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 46667767899999999988777766554 589999998 8777777544345688999999888777766778899998
Q ss_pred cC--CC--eeeeee--------ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---cccccc--------cCCCCeeE
Q psy10566 421 IE--GQ--VLDSWE--------GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL---TDSNLL--------QEDHPVMS 477 (604)
Q Consensus 421 ~~--~~--~~~~~~--------~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~---~~~~~~--------~~~~~i~~ 477 (604)
+. +. .+.... ......++++|.++.++++.......+|.+... ...... .....+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 74 32 112221 113589999999988888777665555555421 011111 12345789
Q ss_pred EEECCCCCEEE-EEecCCeEEEEecCCCceeeEeecccc------ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 478 FTIDATDRLAL-LNVSTQGVHLWDLRDRILLRKFQGVTQ------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 478 ~~~s~~~~~l~-~~~~dg~I~lwd~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
++++|....++ .+.....+..+|.. ++.+..+.-..+ ....-.-+++.++|++.++ ++-+.++++...
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 99999765555 45556778889965 445554442211 0111222444688875444 777777777644
No 278
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.00044 Score=71.39 Aligned_cols=241 Identities=13% Similarity=0.140 Sum_probs=148.1
Q ss_pred eeEEEECC-CCCeEEEEeCCCceEEEEEECCCceEEEEecCC--CCCCeEEEEE-------ecCCCEEEEEecCC-----
Q psy10566 350 VAYLAWSP-DSSHLLVVGPEDCHELWVWNIETELLRVKLNHS--PEDSLTSCSW-------NRDGTKFVCGGIRG----- 414 (604)
Q Consensus 350 V~~l~~sp-d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~-------~~~~~~l~s~~~dg----- 414 (604)
...|+|+| ++..|+.+...+ ..|++.|..++........+ .......++| ++++..++++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~-~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGH-KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETE-EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCC-CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 56899999 455666665543 47999999988776655432 1235889999 99999777776554
Q ss_pred --eEEEEEcCC--Cee-----eeee-ceeEEEEEEcCC-CCEEEEEeCCCeEEEEEcC-------CCcc------c----
Q psy10566 415 --QFYQCDIEG--QVL-----DSWE-GVRVNCLWCRSD-GKSVLAADTHHRIRTYNFE-------HLTD------S---- 466 (604)
Q Consensus 415 --~i~iwd~~~--~~~-----~~~~-~~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~-------~~~~------~---- 466 (604)
.|.+++... ... ..+. ......++++|+ +..+++-..++.|..+|+. ++.. .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366665432 221 1121 124567788995 4545556677889999987 4432 0
Q ss_pred --cc--ccCCCCeeEEEECCCCCEEEEE-ecCCeEEEEecC--CCce--eeEeecc---cc---------c-eEEEEeee
Q psy10566 467 --NL--LQEDHPVMSFTIDATDRLALLN-VSTQGVHLWDLR--DRIL--LRKFQGV---TQ---------G-QFTIHSCF 524 (604)
Q Consensus 467 --~~--~~~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~--~~~~--~~~~~~~---~~---------~-~~~i~~~~ 524 (604)
.+ .........++++|+++.|+++ +..+.|+.++.. .+.. ...+.+. .+ . ...-..++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 11 1223456799999999965555 456789986654 3322 1233221 00 0 00110122
Q ss_pred CC-------CCCcEEEEEeCCCcEEEEeCCCCcceEEeeCC------------------------CCCeeEEEEcCCCCc
Q psy10566 525 GG-------ANQDFVASGSEDGKVYIWHVKRELPIATLSGH------------------------TRTVSCVAWNPVYHQ 573 (604)
Q Consensus 525 ~~-------~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h------------------------~~~V~~v~~sp~~~~ 573 (604)
.. .++.++++-..+++|+.++ .+|. +.++.+. -.....|+++++++.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 22 4567777777788999998 4563 4455332 023678999986467
Q ss_pred EEEEEeCCCcEEEECCCCCC
Q psy10566 574 MIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 574 ~l~s~s~Dg~I~iW~~~~~~ 593 (604)
++++=.....||.++++...
T Consensus 458 lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC
T ss_pred EEEEeCCCCEEEEEECCCCc
Confidence 77777778899999887643
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.25 E-value=2.2e-05 Score=85.71 Aligned_cols=242 Identities=11% Similarity=-0.001 Sum_probs=140.0
Q ss_pred eEEEECC-CCCeEEEEeCCCc---------eEEEEEECCCceEE--EEecCCCCCCeEEEEEecCCCEEEEEec-CCeEE
Q psy10566 351 AYLAWSP-DSSHLLVVGPEDC---------HELWVWNIETELLR--VKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFY 417 (604)
Q Consensus 351 ~~l~~sp-d~~~l~s~~~d~~---------~~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~ 417 (604)
.++++.| +++.++.+|.+.. ..+.+||..+++.. ......+.....++++..+++.+++|+. +..+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3566777 8888888875431 26899999887632 2222223333456788889999999985 45899
Q ss_pred EEEcCCCeeeeeec---ee-EEEEEEcCCCCEEEEEe-CC-----CeEEEEEcCCCcccccc-----cCCCCeeEEEECC
Q psy10566 418 QCDIEGQVLDSWEG---VR-VNCLWCRSDGKSVLAAD-TH-----HRIRTYNFEHLTDSNLL-----QEDHPVMSFTIDA 482 (604)
Q Consensus 418 iwd~~~~~~~~~~~---~~-v~~l~~s~~g~~l~~~~-~d-----g~I~i~d~~~~~~~~~~-----~~~~~i~~~~~s~ 482 (604)
+||........... .+ -.++++.++++.++.|+ .+ ..+.+||..+..-.... .....-....+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99986544333222 12 23455667999999988 34 56999998775432210 0000000112234
Q ss_pred CCCEEEEEecC---------CeEEEEecCCCceeeEeecccc-------ceEEEEeeeCCCCCcEEEEEeCCC-------
Q psy10566 483 TDRLALLNVST---------QGVHLWDLRDRILLRKFQGVTQ-------GQFTIHSCFGGANQDFVASGSEDG------- 539 (604)
Q Consensus 483 ~~~~l~~~~~d---------g~I~lwd~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~sgs~dg------- 539 (604)
++..++.++.+ ..+..||..+............ .......++...++++++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 55555666544 3577888877654332221111 000111111124788888888543
Q ss_pred ----cEEEEeCCCCcceEEe--eCCCCCe-eEEEEcCCCCcEEEEEeCC-----------CcEEEECCCCCC
Q psy10566 540 ----KVYIWHVKRELPIATL--SGHTRTV-SCVAWNPVYHQMIASVSDD-----------CTVRIWGPHLNT 593 (604)
Q Consensus 540 ----~I~iwd~~~~~~~~~l--~~h~~~V-~~v~~sp~~~~~l~s~s~D-----------g~I~iW~~~~~~ 593 (604)
.|.+||..+..-.... ..+.... .+++..|+ +.+++.||.+ ..+.+||+.+.+
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~-g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPD-GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTT-SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCC-CCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 6888888776543332 2222222 34456677 7888888864 468899987654
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.22 E-value=0.00062 Score=63.94 Aligned_cols=197 Identities=8% Similarity=0.060 Sum_probs=125.5
Q ss_pred eecccCCCcEEEEEEcCCCCeE-EEEECCCeEEEEEeCCCCceeEeeEEe--ccCCCCeeEEEECCCCCeEEEEeCCCce
Q psy10566 295 QVLNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTL--EGHTLGVAYLAWSPDSSHLLVVGPEDCH 371 (604)
Q Consensus 295 ~~l~~H~~~V~~v~fspdg~~l-asgs~dg~i~iwd~~~~~~~~~~~~~l--~~h~~~V~~l~~spd~~~l~s~~~d~~~ 371 (604)
+.+.|-.+.+..++|+|++..| ++...++.|...|.. +.....+ .+ ......|++.+++.++++.-.++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-----g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~-- 91 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-----GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDY-- 91 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-----CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTT--
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-----CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCC--
Confidence 4566666789999999987644 456677777777765 2233333 33 24578899999987666654554
Q ss_pred EEEEEECCCceE---EEEec-----CCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----Ceeeeee---------
Q psy10566 372 ELWVWNIETELL---RVKLN-----HSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG----QVLDSWE--------- 430 (604)
Q Consensus 372 ~i~vwd~~~~~~---~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~--------- 430 (604)
.+.++++..... ..... ...+.....++|+|.++.|+++.......+|.+++ ..+....
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence 788888765431 22221 12345578999999998888887766556665543 1122111
Q ss_pred ceeEEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcccccccC----------CCCeeEEEECCCCCEEEEEecCCeEEEE
Q psy10566 431 GVRVNCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDSNLLQE----------DHPVMSFTIDATDRLALLNVSTQGVHLW 499 (604)
Q Consensus 431 ~~~v~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~~~~~~----------~~~i~~~~~s~~~~~l~~~~~dg~I~lw 499 (604)
-.....+++.|... .++.......+..+|.... ....+.- -.....++++++|+ +++.+..+.++.|
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f 249 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRF 249 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEE
Confidence 11467889998654 4555566677888887754 2222111 13568999999998 4555677777776
Q ss_pred ec
Q psy10566 500 DL 501 (604)
Q Consensus 500 d~ 501 (604)
.-
T Consensus 250 ~~ 251 (255)
T 3qqz_A 250 TP 251 (255)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.20 E-value=0.0026 Score=64.57 Aligned_cols=212 Identities=7% Similarity=-0.055 Sum_probs=134.8
Q ss_pred CCCcEEEEEEcCCCCeEE-EEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGLKLA-TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
....+..++|++.+..|. +-...+.|..++++...........+.........+++.+.+..|..+.... ..|.+.++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~-~~I~~~~~ 188 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADT 188 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTT-TEEEEECT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCC-CeEEEEeC
Confidence 446788999998655444 4445678888887621100112222332345678899988655565555433 38999998
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H 452 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d 452 (604)
+.......+. ........+++.|.+..|+.+.. .+.|...+++|.....+.. .....+++++++..|+.+.. .
T Consensus 189 ~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 189 KGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 8765444443 22345789999997666665543 3789999998866554422 36789999988877777654 5
Q ss_pred CeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 453 HRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
+.|..+|+.......+... ......+++. .+..+++....+.|..+|..+++.+..+....
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENL 331 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSC
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCC
Confidence 7899999876544443332 2345566663 34455555667789999988887776665433
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.20 E-value=0.00027 Score=72.60 Aligned_cols=235 Identities=13% Similarity=0.119 Sum_probs=141.1
Q ss_pred CeeEEEECCC--CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEc
Q psy10566 349 GVAYLAWSPD--SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDI 421 (604)
Q Consensus 349 ~V~~l~~spd--~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~ 421 (604)
....++|+|+ +..|..+...+ .|+.+|..++....... .......++|+++|+ |+++...+ .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~--~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRD--AFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTS--CEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCC--CEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4678999995 44565555544 79999998887665543 345689999999999 44444321 2333343
Q ss_pred CCCee--eee-eceeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCcc-ccccc--CCCCeeEEEECCCCCEEEEEe-cC
Q psy10566 422 EGQVL--DSW-EGVRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLTD-SNLLQ--EDHPVMSFTIDATDRLALLNV-ST 493 (604)
Q Consensus 422 ~~~~~--~~~-~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~~-~~~~~--~~~~i~~~~~s~~~~~l~~~~-~d 493 (604)
.+... ... .......+++.+ +|...++-..++.|+.+|..++.. ..... .......++++|+++.|+++. ..
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 32211 111 122456788999 666665656678899999875544 22221 122334699999999655554 56
Q ss_pred CeEEEEecC--CCce--eeEeecccc------------ceEEEEeeeC---------CCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 494 QGVHLWDLR--DRIL--LRKFQGVTQ------------GQFTIHSCFG---------GANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 494 g~I~lwd~~--~~~~--~~~~~~~~~------------~~~~i~~~~~---------~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
+.|+.++.. ++.. ...+.+... .......+.+ ..+|++.++-...+.|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 789998865 2321 122222100 0000111222 466777777777889999985 4
Q ss_pred CcceEEeeCC------------------CCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 549 ELPIATLSGH------------------TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 549 ~~~~~~l~~h------------------~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|. +.++.+. -.....|+++|.++.++++-...+.|+..+++
T Consensus 374 G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 54 3333322 12367899994437777777778888887764
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.14 E-value=0.00017 Score=79.95 Aligned_cols=189 Identities=13% Similarity=0.092 Sum_probs=113.1
Q ss_pred CeEEEEEe-cCCCEEEEEecC-C----eEEEEEcCCC-e-ee-eeeceeEEEEEEcCCCCEEEEEeCC-----CeEEEEE
Q psy10566 394 SLTSCSWN-RDGTKFVCGGIR-G----QFYQCDIEGQ-V-LD-SWEGVRVNCLWCRSDGKSVLAADTH-----HRIRTYN 459 (604)
Q Consensus 394 ~v~~~~~~-~~~~~l~s~~~d-g----~i~iwd~~~~-~-~~-~~~~~~v~~l~~s~~g~~l~~~~~d-----g~I~i~d 459 (604)
.+...+|+ |||++++.+... | .|+++|+++. . +. .+.. ....++|+|||+.|+....+ ..|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 46788999 999988865442 2 5999999644 3 21 1111 23467899999988887765 3688888
Q ss_pred cCCCccc--cccc--CCCCeeEEEECCCCCEEEEEec---CCeEEEEecCCCc-ee--eEee-ccccceEEEEeeeCCCC
Q psy10566 460 FEHLTDS--NLLQ--EDHPVMSFTIDATDRLALLNVS---TQGVHLWDLRDRI-LL--RKFQ-GVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 460 ~~~~~~~--~~~~--~~~~i~~~~~s~~~~~l~~~~~---dg~I~lwd~~~~~-~~--~~~~-~~~~~~~~i~~~~~~~~ 528 (604)
+.+.... .+.. .......+.++|||++|+.... ...|+++|+.++. .. ..+. ......+.+. +..+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~---~~~g 330 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ---MHGT 330 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE---EETT
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe---eeeC
Confidence 8775432 2222 2234567899999999887764 3468999998752 22 3332 2222223321 1123
Q ss_pred CcEEEEEeCC----CcEEEEeCCCCcceEE-eeCCCC--CeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 529 QDFVASGSED----GKVYIWHVKRELPIAT-LSGHTR--TVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 529 ~~~l~sgs~d----g~I~iwd~~~~~~~~~-l~~h~~--~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+.+++....+ ..|+.+|+.++..... +..|.. .+..+.+. ++.++++...||..++|-
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEE
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEE
Confidence 3344444333 3677788765322222 333433 34556655 357788888888755553
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.00062 Score=69.91 Aligned_cols=153 Identities=11% Similarity=0.160 Sum_probs=96.0
Q ss_pred cEEEEEEcC-CCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEEEC
Q psy10566 303 EVWFCKFSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVWNI 378 (604)
Q Consensus 303 ~V~~v~fsp-dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~ 378 (604)
....++|+| ++..|..+...+.|+.+|.+ .... ..+.........++|+++++.|+++...+ ...+..++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~--~~~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFE--KEYV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETT--TTEE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECC--CCEE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 567899998 45556555555788888876 2222 22222445688999999999666665522 113444443
Q ss_pred CCceE-EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCeeeeee---c-eeEEEEEEcCCCCEEEEE-eC
Q psy10566 379 ETELL-RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQVLDSWE---G-VRVNCLWCRSDGKSVLAA-DT 451 (604)
Q Consensus 379 ~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~-~~v~~l~~s~~g~~l~~~-~~ 451 (604)
..... ...+. .......++++| ++..+++-..++.|..++.++.....+. . .....++++|+|++++.+ ..
T Consensus 213 ~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 32211 11111 123456788999 6776666667789999999766542221 1 246789999999955554 56
Q ss_pred CCeEEEEEcCC
Q psy10566 452 HHRIRTYNFEH 462 (604)
Q Consensus 452 dg~I~i~d~~~ 462 (604)
.+.|..++...
T Consensus 291 ~~~I~~~~~d~ 301 (430)
T 3tc9_A 291 QHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEeCCc
Confidence 78899988653
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0025 Score=70.32 Aligned_cols=224 Identities=8% Similarity=-0.010 Sum_probs=140.2
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc----eEEEEecCCCCCCeEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE----LLRVKLNHSPEDSLTS 397 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~----~~~~~~~~~~~~~v~~ 397 (604)
...|+..++.. .. . ..+......+..|+|.+.+..|+.+.... ..|+.+++... .....+. ........
T Consensus 403 ~~~Ir~i~l~~--~~--~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~-~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~G 475 (791)
T 3m0c_C 403 RHEVRKMTLDR--SE--Y-TSLIPNLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-RDIQAPDG 475 (791)
T ss_dssp BSSEEEECTTS--CC--C-EEEECSCSSEEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEEEC-SSCSCCCE
T ss_pred ccceeEeeccC--Cc--c-eeeecCCCceEEEeecccCCeeEEeeccc-eeEEEEeccCCCCCcceeEEEe-cCCCCcce
Confidence 34577777652 11 1 22222345678999998766666655543 37999988753 2222222 22345678
Q ss_pred EEEecCCCEE-EEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCcccccccC
Q psy10566 398 CSWNRDGTKF-VCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADTH--HRIRTYNFEHLTDSNLLQE 471 (604)
Q Consensus 398 ~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~d--g~I~i~d~~~~~~~~~~~~ 471 (604)
+++.+.+..| ++-...+.|.+.+++|.....+.. .....|++.|.+..|+.+... +.|...++.......+...
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 9999877554 455567899999998876655532 358899999987777766542 6899999876554444443
Q ss_pred -CCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 472 -DHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 472 -~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
-.....+++++.+..|+.+. ..+.|..+++........+... ......+. . ..+.++++-...+.|...|..
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla--v--~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA--V--FEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE--E--ETTEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE--E--eCCEEEEEECCCCEEEEEeCC
Confidence 35788999998777776664 4568999998654443333321 12223332 2 234555666667889999988
Q ss_pred CCcceEEee
Q psy10566 548 RELPIATLS 556 (604)
Q Consensus 548 ~~~~~~~l~ 556 (604)
+|+.+..+.
T Consensus 632 tG~~~~~l~ 640 (791)
T 3m0c_C 632 TGSDVNLLA 640 (791)
T ss_dssp TCCCCEEEE
T ss_pred CCcceEEee
Confidence 887666664
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.05 E-value=0.0013 Score=64.38 Aligned_cols=223 Identities=8% Similarity=-0.008 Sum_probs=135.6
Q ss_pred eEEEEeCCCceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCee--eee-ec-ee
Q psy10566 361 HLLVVGPEDCHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVL--DSW-EG-VR 433 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~--~~~-~~-~~ 433 (604)
+|+.+... .|+..++.... ....+. ....+..++|.+.+..| ++-...+.|..+++++... ... .+ ..
T Consensus 6 ~ll~~~~~---~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 6 LLLYANRR---DLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp EEEEECEE---EEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred EEEEEccC---eEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 44444433 58999987753 111111 11346789999855544 4555667899999876521 111 11 25
Q ss_pred EEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeE
Q psy10566 434 VNCLWCRSDGKSV-LAADTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRK 509 (604)
Q Consensus 434 v~~l~~s~~g~~l-~~~~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~ 509 (604)
...+++.+.+..+ ++-...+.|.+++........+. ........++++|.+..|+.+.. .+.|..+++.... ...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence 6678898755544 44456788999998765443333 33456789999998777776653 5788888876432 222
Q ss_pred e-eccccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEE
Q psy10566 510 F-QGVTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587 (604)
Q Consensus 510 ~-~~~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW 587 (604)
+ ...-... ..+.++++ +.+.++-+..+.|..+|+........+.+......++++.. +.++++-...+.|..+
T Consensus 160 ~~~~~l~~P---nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 160 IINSEIYWP---NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILAC 234 (318)
T ss_dssp EECSSCSCE---EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEE
T ss_pred EEECCCCCc---cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEE
Confidence 2 1111111 22344554 44555555678999999874433333333445667888863 4677777777889999
Q ss_pred CCCCCCC
Q psy10566 588 GPHLNTN 594 (604)
Q Consensus 588 ~~~~~~~ 594 (604)
+..+++.
T Consensus 235 ~~~~G~~ 241 (318)
T 3sov_A 235 NKYTGEG 241 (318)
T ss_dssp ETTTCCS
T ss_pred ECCCCCc
Confidence 8876653
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0088 Score=64.37 Aligned_cols=231 Identities=7% Similarity=-0.050 Sum_probs=147.9
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDS 394 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~ 394 (604)
+|+.+ ....|+..+++.. .......+. .-..+..++|++.+..|..+.... +.|+.+++........+..+ ...
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~--~~~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~-~~I~r~~~~g~~~~~v~~~g-~~~ 81 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETN--NNNVAIPLT-GVKEASALDFDVTDNRIYWTDISL-KTISRAFMNGSALEHVVEFG-LDY 81 (628)
T ss_dssp EEEEE-ETTEEEEEESSCT--TCEEECCCC-SCSCEEEEEEETTTTEEEEEETTT-TEEEEEETTSCSCEEEECSS-CSC
T ss_pred EEEEE-eCCcEEEEECCCC--CcceEEEcC-CCCceEEEEEECCCCEEEEEECCC-CeEEEEECCCCCcEEEEeCC-CCC
Confidence 44444 4567888888732 111111222 234678999999877777666543 38999998765443333322 235
Q ss_pred eEEEEEecCCCEE-EEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccc
Q psy10566 395 LTSCSWNRDGTKF-VCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNL 468 (604)
Q Consensus 395 v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~ 468 (604)
...+++.+.+..| ++-...+.|.+.+++|.....+. ......+++.|....++.... .+.|...++.......+
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 6789998765555 44455689999999876544332 235789999997666666653 56888888877655555
Q ss_pred ccCCCCeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 469 LQEDHPVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 469 ~~~~~~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.........+++++++..|+.+. ..+.|..+|+..... ..+.........+. .+ .+.++++-...+.|...|..
T Consensus 162 ~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~gla--v~--~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLT--QY--QDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEE--EE--TTEEEEEETTTTEEEEEETT
T ss_pred ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEE--EE--CCEEEEecCCCCEEEEEECC
Confidence 55566788999999877666665 467899999876433 33333233333332 22 24555665568899999987
Q ss_pred CCcceEEee
Q psy10566 548 RELPIATLS 556 (604)
Q Consensus 548 ~~~~~~~l~ 556 (604)
+|+....+.
T Consensus 237 tg~~~~~l~ 245 (628)
T 4a0p_A 237 SGQNRTIIQ 245 (628)
T ss_dssp TCCSCEEEE
T ss_pred CCCceEEEe
Confidence 776555543
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.01 E-value=0.0007 Score=66.05 Aligned_cols=184 Identities=16% Similarity=0.263 Sum_probs=120.7
Q ss_pred CCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEEEEEcCC----CC---EEEEEeC---CCeEEEEEcC--CCcccccc-
Q psy10566 403 DGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSD----GK---SVLAADT---HHRIRTYNFE--HLTDSNLL- 469 (604)
Q Consensus 403 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~----g~---~l~~~~~---dg~I~i~d~~--~~~~~~~~- 469 (604)
....++.....+-+.+||++|+.+..+...+++.+..-|+ |+ .+++... +++|.+|++. +.+....-
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 4456666777789999999999999887666666666553 22 2333333 5789999773 33222221
Q ss_pred -----cCC-CCeeEEEE--CCC-CC-EEEEEecCCeEEEEecC-------CCceeeEeeccccceEEEEeeeCCCCCcEE
Q psy10566 470 -----QED-HPVMSFTI--DAT-DR-LALLNVSTQGVHLWDLR-------DRILLRKFQGVTQGQFTIHSCFGGANQDFV 532 (604)
Q Consensus 470 -----~~~-~~i~~~~~--s~~-~~-~l~~~~~dg~I~lwd~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 532 (604)
... ..+..+++ +|. +. ++++...+|.+..|++. +.+.+++|....+ +..|...+....|
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq----~EgcvvDd~~g~L 194 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ----TEGMAADDEYGRL 194 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC----EEEEEEETTTTEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC----cceEEEcCCCCeE
Confidence 112 55666777 774 43 68888899999999983 3456777765443 3334445777789
Q ss_pred EEEeCCCcEEEEeCC-----CCcceEEee-CC-CCCeeEEEE--cCCCC-cEEEEEeCCCcEEEECCC
Q psy10566 533 ASGSEDGKVYIWHVK-----RELPIATLS-GH-TRTVSCVAW--NPVYH-QMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 533 ~sgs~dg~I~iwd~~-----~~~~~~~l~-~h-~~~V~~v~~--sp~~~-~~l~s~s~Dg~I~iW~~~ 590 (604)
+.+-++.-|..++.+ +++.+..+. ++ ...+..|++ .+++. .+|+|+-.+.+..+|+..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999998777777755 344555542 23 346888888 44433 466666578899999996
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.00 E-value=0.0057 Score=60.85 Aligned_cols=198 Identities=14% Similarity=0.115 Sum_probs=108.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec---cCCCCeeEEEECCC---CCeEEEEeCCC----c
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE---GHTLGVAYLAWSPD---SSHLLVVGPED----C 370 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~spd---~~~l~s~~~d~----~ 370 (604)
-..-+.++|.|||+++++ ..+|.|.+++ + +....+..+. ........|+|+|+ +..|.++.... .
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~---g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-E---GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-T---TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-C---CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 345789999999985554 5679999998 3 2333333222 22456889999998 55555444321 0
Q ss_pred eEEEEEECCCce-----EEEE-ec--CCCCCCeEEEEEecCCCEEEEEec-------------CCeEEEEEcCCCe----
Q psy10566 371 HELWVWNIETEL-----LRVK-LN--HSPEDSLTSCSWNRDGTKFVCGGI-------------RGQFYQCDIEGQV---- 425 (604)
Q Consensus 371 ~~i~vwd~~~~~-----~~~~-~~--~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~---- 425 (604)
..|..|+...+. .+.. +. .........++|.|||..+++.+. .|.|.-++.+++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 268888877531 1221 22 111123468999999977666432 2577777776622
Q ss_pred ---------eeee-ece-eEEEEEEcC-CCCEEEEEeCCCeE------EEEEcCCCc------------------ccccc
Q psy10566 426 ---------LDSW-EGV-RVNCLWCRS-DGKSVLAADTHHRI------RTYNFEHLT------------------DSNLL 469 (604)
Q Consensus 426 ---------~~~~-~~~-~v~~l~~s~-~g~~l~~~~~dg~I------~i~d~~~~~------------------~~~~~ 469 (604)
...+ .++ ....++|+| ++..+++-.....+ .+.-+..+. .....
T Consensus 185 pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 1111 122 477889999 56644443333321 122222211 00011
Q ss_pred cCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 470 ~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
........++| .++..+++....+.|...++...
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEE
T ss_pred CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCC
Confidence 11223456666 45666665556667777776543
No 290
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.97 E-value=0.0081 Score=59.74 Aligned_cols=199 Identities=11% Similarity=0.063 Sum_probs=111.6
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEec---cCCCCeeEEEECCC---CCeEEEEeCC--Cc--
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLE---GHTLGVAYLAWSPD---SSHLLVVGPE--DC-- 370 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~spd---~~~l~s~~~d--~~-- 370 (604)
-...+.++|.|||+++++ ..+|.|++++.+ +. ..+..+. ........|+|+|+ +..|.++... ..
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~---G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS---GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS---CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC---Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 456789999999985554 567999988732 23 3333322 22356889999998 4455444331 11
Q ss_pred --eEEEEEECCCc-------eEEE-EecCCCCCCeEEEEEecCCCEEEEEec-------------CCeEEEEEcCCCe--
Q psy10566 371 --HELWVWNIETE-------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGI-------------RGQFYQCDIEGQV-- 425 (604)
Q Consensus 371 --~~i~vwd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~~-- 425 (604)
..|..|+...+ +.+. .+..........++|.|||..+++.+. .|.|.-++.+++.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 26888887654 1111 122111123467999999987776442 2567777776651
Q ss_pred --------eeeeeceeEEEEEEcC-CCCEEEEEeCCC---eEEEEEcCC--------C--------cccccc-cCCCCee
Q psy10566 426 --------LDSWEGVRVNCLWCRS-DGKSVLAADTHH---RIRTYNFEH--------L--------TDSNLL-QEDHPVM 476 (604)
Q Consensus 426 --------~~~~~~~~v~~l~~s~-~g~~l~~~~~dg---~I~i~d~~~--------~--------~~~~~~-~~~~~i~ 476 (604)
+...-......++|+| +|..+++-.... .|.+..... . ...... .......
T Consensus 183 ~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp TSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 2221112467899999 565444432222 243332111 0 000111 1233566
Q ss_pred EEEEC-------CCCCEEEEEecCCeEEEEecCCC
Q psy10566 477 SFTID-------ATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 477 ~~~~s-------~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.+++. .++.++++....+.|...++...
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 77773 46666666666778888888753
No 291
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.97 E-value=0.015 Score=66.94 Aligned_cols=284 Identities=15% Similarity=0.123 Sum_probs=156.5
Q ss_pred CCcEEEEEEcCC------CCeEEEEEC-CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC--CCCCeEEEEeCCCce
Q psy10566 301 CDEVWFCKFSPD------GLKLATGSK-DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS--PDSSHLLVVGPEDCH 371 (604)
Q Consensus 301 ~~~V~~v~fspd------g~~lasgs~-dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--pd~~~l~s~~~d~~~ 371 (604)
.+.|.|+++.|. ++++|.|.. |++|+|++++ .........+.. .....++.+. ....+|..+-.||..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~--~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP--SFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT--TCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC--CCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeE
Confidence 458999999864 368999997 9999999998 222222333432 1233333332 234577887788832
Q ss_pred EEEEEECCCceEEEE--ecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeee-eeceeEEEE-EEcCC--CCE
Q psy10566 372 ELWVWNIETELLRVK--LNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS-WEGVRVNCL-WCRSD--GKS 445 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~v~~l-~~s~~--g~~ 445 (604)
.-..+|..+|..... ...+ ..++.-..+...+..-+.+..+....++.-+++.... .....+..+ .|+.. .+-
T Consensus 630 ~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 630 FYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTE
T ss_pred EEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEeccCcccCCCc
Confidence 223455555544321 1112 3455555555444444444445544445444442221 111122222 23332 234
Q ss_pred EEEEeCCCeEEEEEcCCCcc--cccccCCCCeeEEEECCCCCEEEEEecC------------------------------
Q psy10566 446 VLAADTHHRIRTYNFEHLTD--SNLLQEDHPVMSFTIDATDRLALLNVST------------------------------ 493 (604)
Q Consensus 446 l~~~~~dg~I~i~d~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~d------------------------------ 493 (604)
++..+ ++.++|..+..... ...+.-...+..++++|..+.+++++.+
T Consensus 709 ~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCC
T ss_pred EEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccc
Confidence 55444 45588888755322 2223345677888888877765554321
Q ss_pred -------------------CeEEEEecCCCceeeEeeccc-cceEEEEeeeCCC-CCcEEEEEe----------CCCcEE
Q psy10566 494 -------------------QGVHLWDLRDRILLRKFQGVT-QGQFTIHSCFGGA-NQDFVASGS----------EDGKVY 542 (604)
Q Consensus 494 -------------------g~I~lwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~l~sgs----------~dg~I~ 542 (604)
+.|+++|..+.+.+..+.-.. ....++..+.+.. ...+++.|. ..|.|+
T Consensus 788 ~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~ 867 (1158)
T 3ei3_A 788 LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIV 867 (1158)
T ss_dssp CC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEE
T ss_pred cccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEE
Confidence 236777877777666655332 2234444444432 357888886 348899
Q ss_pred EEeCCCCcceEEee-CCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCCCC
Q psy10566 543 IWHVKRELPIATLS-GHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNT 593 (604)
Q Consensus 543 iwd~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~~ 593 (604)
+|++..++.....+ ...++|++++--. +.++++. ..+|++|++...+
T Consensus 868 vf~v~~~kL~lv~~~~v~g~v~al~~~~--g~Lla~i--g~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 868 VFQYSDGKLQTVAEKEVKGAVYSMVEFN--GKLLASI--NSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEEETTEEEEEEEEEESSCEEEEEEET--TEEEEEE--TTEEEEEEECTTS
T ss_pred EEEEECCEEEEEEEEEcCCcCEEEeeeC--CEEEEEc--CCEEEEEECCCCc
Confidence 99997544322211 2368899887542 5555544 4789999987653
No 292
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.97 E-value=0.0019 Score=63.79 Aligned_cols=197 Identities=17% Similarity=0.154 Sum_probs=115.8
Q ss_pred cEEEEEEcCCCCeEEEEE------------CCCeEEEEEeCCCCceeEeeEEecc-----CCCCeeEEEECC--CCC-eE
Q psy10566 303 EVWFCKFSPDGLKLATGS------------KDTTVIIWDVDPVTFTCQHRKTLEG-----HTLGVAYLAWSP--DSS-HL 362 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs------------~dg~i~iwd~~~~~~~~~~~~~l~~-----h~~~V~~l~~sp--d~~-~l 362 (604)
..-.++..|+|..+++++ .+|.|.++|.+..+.+...+. +.+ .......+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 344566788886555542 689999999874333333332 222 234566777755 354 45
Q ss_pred EEEeCC-CceEEEEEECCC--ce--EEEEecCCCCCCeEEEEEecCCCEEEEEe-----------------cCCeEEEEE
Q psy10566 363 LVVGPE-DCHELWVWNIET--EL--LRVKLNHSPEDSLTSCSWNRDGTKFVCGG-----------------IRGQFYQCD 420 (604)
Q Consensus 363 ~s~~~d-~~~~i~vwd~~~--~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-----------------~dg~i~iwd 420 (604)
+++... +..+|.+|++.. +. .+..+....-...+.+.+.++|.+.++.. ..|.|+.+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 555433 223677776654 32 23344433345688999999998777654 124566665
Q ss_pred cCCCeeeeeec-eeEEEEEEcCCCCEEEEEe-CCCeEEEEEcCCC-c--ccccccCCCCeeEEEECC-CCCEEEEEecC-
Q psy10566 421 IEGQVLDSWEG-VRVNCLWCRSDGKSVLAAD-THHRIRTYNFEHL-T--DSNLLQEDHPVMSFTIDA-TDRLALLNVST- 493 (604)
Q Consensus 421 ~~~~~~~~~~~-~~v~~l~~s~~g~~l~~~~-~dg~I~i~d~~~~-~--~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d- 493 (604)
.. +......+ ...+.++++||++.++.+. ..+.|..|++... . ....+........+++++ +|++.+++..+
T Consensus 210 ~~-~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 210 PN-DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp TT-CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred CC-eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCc
Confidence 53 22222233 2578999999998877765 4678999998632 1 112223345667888888 58876655433
Q ss_pred CeEEEEec
Q psy10566 494 QGVHLWDL 501 (604)
Q Consensus 494 g~I~lwd~ 501 (604)
+.|..||.
T Consensus 289 ~~v~~~~P 296 (355)
T 3sre_A 289 MRIFFYDA 296 (355)
T ss_dssp HHHHSCCT
T ss_pred eEEEEECC
Confidence 23444443
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.94 E-value=0.0066 Score=66.94 Aligned_cols=209 Identities=7% Similarity=-0.063 Sum_probs=131.2
Q ss_pred CCCcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEEC
Q psy10566 300 HCDEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378 (604)
Q Consensus 300 H~~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~ 378 (604)
....+..++|++.+. ++++-...+.|+.++++...........+.........|++.+.+..|+.+.... ..|.+.++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~-~~I~v~~l 500 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADT 500 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT-TEEEEEET
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCC-CeEEEEeC
Confidence 345677899998544 4445555678888887621111122233333445677899998887776665544 38999999
Q ss_pred CCceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC-C
Q psy10566 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT-H 452 (604)
Q Consensus 379 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~-d 452 (604)
........+. ........|++.|.+..|+.+.. .+.|...+++|.....+.. .....|++.+.+..|+.+.. .
T Consensus 501 dG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 501 KGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp TSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence 8665443333 23345889999997666665543 3689999998876655533 36889999987777776654 5
Q ss_pred CeEEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEee
Q psy10566 453 HRIRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ 511 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~ 511 (604)
+.|..+++.......+... -.....+++.. +.++++-...+.|...|..+++.+..+.
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 6899999876554444332 12344566632 2344444456788888877776555553
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.94 E-value=0.0014 Score=67.36 Aligned_cols=201 Identities=9% Similarity=0.060 Sum_probs=116.9
Q ss_pred CcEEEEEEcCC--CCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC--CceEEEEEE
Q psy10566 302 DEVWFCKFSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE--DCHELWVWN 377 (604)
Q Consensus 302 ~~V~~v~fspd--g~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d--~~~~i~vwd 377 (604)
.....++|+|+ +..|..+...+.|+.++.. ++. +..+.........++|+++|+.+++.... ....+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~--~g~---v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFV--NQY---VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETT--TTE---EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEEC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECC--CCE---EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEE
Confidence 34678999995 3334444333789999875 222 22333344568999999999944443321 011244444
Q ss_pred CCCceE-EEEecCCCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcC-CCeeeeeec----eeEEEEEEcCCCCEEEEEe
Q psy10566 378 IETELL-RVKLNHSPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIE-GQVLDSWEG----VRVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 378 ~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~----~~v~~l~~s~~g~~l~~~~ 450 (604)
...+.. ...+. .......++++| ++..+++-..++.|+.+|.+ +.....+.. .....++++|+++.++.+.
T Consensus 214 ~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 332211 01111 123456788999 66666666677899999996 554222211 1234699999999655554
Q ss_pred -CCCeEEEEEcCC--Cccc---cccc---------------CCCCeeEEEE---------CCCCCEEEEEecCCeEEEEe
Q psy10566 451 -THHRIRTYNFEH--LTDS---NLLQ---------------EDHPVMSFTI---------DATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 451 -~dg~I~i~d~~~--~~~~---~~~~---------------~~~~i~~~~~---------s~~~~~l~~~~~dg~I~lwd 500 (604)
..+.|+.++... .... .+.. .-.....+++ .+++.+.++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 568899988653 2110 1111 0123567888 77777777777788899998
Q ss_pred cCCCceeeEee
Q psy10566 501 LRDRILLRKFQ 511 (604)
Q Consensus 501 ~~~~~~~~~~~ 511 (604)
. ++ .+.++.
T Consensus 372 ~-~G-~v~t~~ 380 (433)
T 4hw6_A 372 P-EG-RVTTYA 380 (433)
T ss_dssp T-TS-EEEEEE
T ss_pred C-CC-CEEEEE
Confidence 5 45 333443
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.90 E-value=0.0047 Score=60.74 Aligned_cols=231 Identities=6% Similarity=-0.046 Sum_probs=125.1
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
...+.++.|++ +..++. +.++.| |...+...+.+.......+...+..+.+.+++..++++ .++ .|+. ..+.
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i--~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g--~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIM--LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVG--AIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEE--EEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTC--CEEE-ESST
T ss_pred CccEEEEEecC-CeEEEE-ECCCeE--EEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCc--cEEE-EcCC
Confidence 44688899986 454554 456644 33443333444433222234557788887777655554 444 3322 2223
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEeCCCeEEE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAADTHHRIRT 457 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~~dg~I~i 457 (604)
|+.-..........+..+++.+++..++++...+..+..|-.+....... ...+..+++.+++..+ +++.+|.+++
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 43223333344557899999998887766654443444443344333322 2357788888888755 5556788777
Q ss_pred EEcCCCcc---ccc--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc---ccceEEEEeeeCCCCC
Q psy10566 458 YNFEHLTD---SNL--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV---TQGQFTIHSCFGGANQ 529 (604)
Q Consensus 458 ~d~~~~~~---~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~ 529 (604)
.+...+.. ... +.....+..+.+.+++..++++. ++.| .+....++.-..+... ....+.+.. .+++
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~---~~~~ 304 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILF---FSPD 304 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEE---EETT
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEE---ECCC
Confidence 64221211 111 11224578899998777666654 6656 3444445444433321 222333322 2334
Q ss_pred cEEEEEeCCCcEEEEeC
Q psy10566 530 DFVASGSEDGKVYIWHV 546 (604)
Q Consensus 530 ~~l~sgs~dg~I~iwd~ 546 (604)
.+++++.+|.|.-++-
T Consensus 305 -~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 -QGFILGQKGILLRYVT 320 (327)
T ss_dssp -EEEEECSTTEEEEECC
T ss_pred -ceEEEcCCceEEEEcC
Confidence 4666678898877664
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.88 E-value=0.034 Score=59.66 Aligned_cols=282 Identities=9% Similarity=-0.058 Sum_probs=154.7
Q ss_pred CcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
.....+++.+.+. ++++-...+.|.+.+.+ ..... ..+...-.....|++.|.+.+|+.+.......|...++..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d--G~~~~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLD--GSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCE--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECC--CCCEE--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC
Confidence 5688999999655 44555567889999987 21111 1122334557889999976666665543223788888765
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEe-CCCeE
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG-IRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAAD-THHRI 455 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~-~dg~I 455 (604)
........ ..-.....+++++++..|..+. ..+.|..+|++|.....+.. .....+++..+ .++.+. ..+.|
T Consensus 160 ~~~~~l~~-~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V 236 (619)
T 3s94_A 160 SSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSI 236 (619)
T ss_dssp CSCEEEEC-SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSE
T ss_pred CceEEEEe-CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEE
Confidence 43333332 2234578999999766666554 45789999998765544322 12345666544 444443 45678
Q ss_pred EEEEcCCCcccccccC-CCC-------------------------eeEEEE-----------CCCC--------------
Q psy10566 456 RTYNFEHLTDSNLLQE-DHP-------------------------VMSFTI-----------DATD-------------- 484 (604)
Q Consensus 456 ~i~d~~~~~~~~~~~~-~~~-------------------------i~~~~~-----------s~~~-------------- 484 (604)
...|..+++....+.. ... ...+++ .|.|
T Consensus 237 ~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~ 316 (619)
T 3s94_A 237 LACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGA 316 (619)
T ss_dssp EEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSC
T ss_pred EEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCC
Confidence 8888765432211110 000 000111 1111
Q ss_pred -CEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCC-CCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCe
Q psy10566 485 -RLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA-NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTV 562 (604)
Q Consensus 485 -~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V 562 (604)
.+|+.+ ..+.|+..++..............-...+ .+.+.+ ++.++++-...+.|+.++.........+...-..+
T Consensus 317 ~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~-~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p 394 (619)
T 3s94_A 317 TELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAI-AIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP 394 (619)
T ss_dssp SEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred ceEEEEE-cccceEEEecCCCccceeEEeccccCccE-EEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc
Confidence 122322 33456666665443211111111101122 233334 45555555567889999887544433343334567
Q ss_pred eEEEEcCCCCcEEEEEeCCCcEEEECCCCC
Q psy10566 563 SCVAWNPVYHQMIASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 563 ~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~~ 592 (604)
..+++.+.+++++++-+..+.|.+.+++..
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 889998764677777777888998888754
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.85 E-value=0.0062 Score=65.44 Aligned_cols=225 Identities=8% Similarity=-0.034 Sum_probs=132.9
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE-EEEecCCCCCCeEEEEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL-RVKLNHSPEDSLTSCSW 400 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~ 400 (604)
...|+..+++. ..... ..+...-..+..++|++.+..|+.+.... ..|..+++..... ...+. ..-.....+++
T Consensus 17 ~~~I~~i~~~~--~~~~~-~~~~~~~~~~~~ld~~~~~~~ly~sD~~~-~~I~r~~~~g~~~~~~v~~-~~~~~P~GlAv 91 (619)
T 3s94_A 17 RRDLRLVDATN--GKENA-TIVVGGLEDAAAVDFVFSHGLIYWSDVSE-EAIKRTEFNKTESVQNVVV-SGLLSPDGLAC 91 (619)
T ss_dssp SSBEEEECCC------------CBCCSCEEEEEEETTTTEEEEEETTT-TEEEEEEC-----CEEEEC-SSCSCEEEEEE
T ss_pred cccEEEEeCCC--CcceE-EEEEcCCCceEEEEEEeCCCEEEEEECCC-CeEEEEEccCCCceEEEEe-CCCCCcCeEEE
Confidence 56688888761 11111 11222344578999999877777766544 3899999876532 22222 22246889999
Q ss_pred ecCCCEEE-EEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccccc-CCC
Q psy10566 401 NRDGTKFV-CGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNLLQ-EDH 473 (604)
Q Consensus 401 ~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~~~-~~~ 473 (604)
.+.+..++ +-...+.|.+.+++|.....+.. .....+++.|.+..++.+.. .+.|...++.......+.. .-.
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~ 171 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 171 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC
Confidence 99655554 44567899999998876544432 25778999998776666664 4678877876654433332 345
Q ss_pred CeeEEEECCCCCEEEEEe-cCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcce
Q psy10566 474 PVMSFTIDATDRLALLNV-STQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552 (604)
Q Consensus 474 ~i~~~~~s~~~~~l~~~~-~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~ 552 (604)
....+++++++..|+.+. ..+.|..+|+..........+.......+. . ..+ .++++-..++.|...|..+++..
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~--~-~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT--L-FED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEE--E-SSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEE--E-eCC-EEEEecCCCCEEEEEECCCCccc
Confidence 678999999776666654 456799999875433322221112222222 2 233 45555556788999998877655
Q ss_pred EEe
Q psy10566 553 ATL 555 (604)
Q Consensus 553 ~~l 555 (604)
..+
T Consensus 248 ~~i 250 (619)
T 3s94_A 248 REI 250 (619)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.85 E-value=0.0039 Score=60.25 Aligned_cols=196 Identities=7% Similarity=0.092 Sum_probs=125.1
Q ss_pred EEEEEEcCCCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEecc----C--CCCeeEEEE---CCCCCeEEEEeC------
Q psy10566 304 VWFCKFSPDGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEG----H--TLGVAYLAW---SPDSSHLLVVGP------ 367 (604)
Q Consensus 304 V~~v~fspdg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~----h--~~~V~~l~~---spd~~~l~s~~~------ 367 (604)
--+++|.+....|..++ ..++|..|+.. .+....+ .+.+ . ...+..|.| .|+++.+++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~--~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPK--TQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTT--TCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCC--CCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34678988655555555 78999999986 2222223 3332 1 113579999 688777665431
Q ss_pred -----CCceEEEEEECC---CceEEEEecCC------------CCCCeEEEEEecCCCEEEEEecC-CeEEEEEcCCCee
Q psy10566 368 -----EDCHELWVWNIE---TELLRVKLNHS------------PEDSLTSCSWNRDGTKFVCGGIR-GQFYQCDIEGQVL 426 (604)
Q Consensus 368 -----d~~~~i~vwd~~---~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~ 426 (604)
.+...|..+|+. +++........ .......++..++|+..++++.. +.|...+.+|+.+
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 112379999999 77655444311 11347899999999999999999 9999999888755
Q ss_pred eeeece--------eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc--cccc--c---CCCCeeE-EEECCCCCEEEEE
Q psy10566 427 DSWEGV--------RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD--SNLL--Q---EDHPVMS-FTIDATDRLALLN 490 (604)
Q Consensus 427 ~~~~~~--------~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~--~~~~--~---~~~~i~~-~~~s~~~~~l~~~ 490 (604)
..|... ..+.+++.|+|+.|++....|.+..+|+..... .... . ....... +..-.+|+.++++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence 544211 256899999999999998899999999885322 1111 1 1112233 2334467775554
Q ss_pred e-cCCeEEEEecC
Q psy10566 491 V-STQGVHLWDLR 502 (604)
Q Consensus 491 ~-~dg~I~lwd~~ 502 (604)
. ..+.+.+.+..
T Consensus 252 ~~~~~~~~l~S~D 264 (334)
T 2p9w_A 252 ARAPYAISFRSWD 264 (334)
T ss_dssp EETTEEEEEECSS
T ss_pred cCCCCEEEEECCC
Confidence 4 34545555443
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.84 E-value=0.012 Score=58.34 Aligned_cols=221 Identities=14% Similarity=0.060 Sum_probs=118.4
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceE--EEEec--CCCCCCeEEEEEecC---CCEEEEEec-C-----C
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELL--RVKLN--HSPEDSLTSCSWNRD---GTKFVCGGI-R-----G 414 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~--~~~~~--~~~~~~v~~~~~~~~---~~~l~s~~~-d-----g 414 (604)
.....++|.|+|+.+++ ...+ .|++++ ++.. +..+. .........++|+|+ +..|.++.. . +
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g--~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPG--RIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTT--EEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEEE-eCCC--eEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 35679999999985555 5555 899998 4432 22211 112346889999998 555554443 2 6
Q ss_pred eEEEEEcCCC-------eeeeee-----ceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCCc-----
Q psy10566 415 QFYQCDIEGQ-------VLDSWE-----GVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHLT----- 464 (604)
Q Consensus 415 ~i~iwd~~~~-------~~~~~~-----~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~----- 464 (604)
.|..++.++. .+..+. .|....++|.|+|...++.+. .+.|..++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 7888887542 111122 134568999999976665432 2567767665310
Q ss_pred -------cccccc-CCCCeeEEEECC-CCCEEEEEecCCeE------EEEecCCCc------------------eeeEee
Q psy10566 465 -------DSNLLQ-EDHPVMSFTIDA-TDRLALLNVSTQGV------HLWDLRDRI------------------LLRKFQ 511 (604)
Q Consensus 465 -------~~~~~~-~~~~i~~~~~s~-~~~~l~~~~~dg~I------~lwd~~~~~------------------~~~~~~ 511 (604)
...+.. .......++|+| ++.+.++-...+.+ .+.-+..+. ++..+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 111111 112356789999 55655544333321 122222221 112221
Q ss_pred ccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcc------eEEeeCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 512 GVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP------IATLSGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 512 ~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~------~~~l~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
.+. ....+ .+ .+|.++++.-..+.|...++..... ...+-.-...+..+++.|+ +.++++..
T Consensus 266 ~~~-ap~G~--~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~lyv~~~ 333 (352)
T 2ism_A 266 QGF-PPGNL--AF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD-GALYVTTS 333 (352)
T ss_dssp TCC-CEEEE--EE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT-SCEEEEEC
T ss_pred CCC-CCcce--EE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCC-CcEEEEEe
Confidence 111 11122 22 3566666666677788777764331 1222222367899999999 55555543
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.78 E-value=0.0055 Score=59.75 Aligned_cols=191 Identities=12% Similarity=0.179 Sum_probs=122.6
Q ss_pred CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecC----CCE--EEEEe--c--CCeEEEEEcC--CCee
Q psy10566 359 SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRD----GTK--FVCGG--I--RGQFYQCDIE--GQVL 426 (604)
Q Consensus 359 ~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~s~~--~--dg~i~iwd~~--~~~~ 426 (604)
...++.....+ -+.+||+ +|+.+..+.. +.+..+..-|+ |+. ++.++ . +++|.+|+++ ...+
T Consensus 40 ~s~ii~t~k~~--gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 40 NSKLITTNKKS--GLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GCEEEEEETTT--EEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred ccEEEEEcCCC--CEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 34455444444 6999999 7887777752 56777777663 222 33333 3 5789999773 3345
Q ss_pred eeeec---------eeEEEEEE--cCC-CC-EEEEEeCCCeEEEEEcCC-------CcccccccCCCCeeEEEECCCCCE
Q psy10566 427 DSWEG---------VRVNCLWC--RSD-GK-SVLAADTHHRIRTYNFEH-------LTDSNLLQEDHPVMSFTIDATDRL 486 (604)
Q Consensus 427 ~~~~~---------~~v~~l~~--s~~-g~-~l~~~~~dg~I~i~d~~~-------~~~~~~~~~~~~i~~~~~s~~~~~ 486 (604)
..+.. ..+..+++ ++. ++ ++++...+|.+..|++.. .+....+.....+..+.+++....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44421 23445666 674 43 688888899999999843 233444555778899999999999
Q ss_pred EEEEecCCeEEEEecC-----CCceeeEee-cc-ccceEEEEeeeCCCCCc-EEEEEe-CCCcEEEEeCC-CCcceEEee
Q psy10566 487 ALLNVSTQGVHLWDLR-----DRILLRKFQ-GV-TQGQFTIHSCFGGANQD-FVASGS-EDGKVYIWHVK-RELPIATLS 556 (604)
Q Consensus 487 l~~~~~dg~I~lwd~~-----~~~~~~~~~-~~-~~~~~~i~~~~~~~~~~-~l~sgs-~dg~I~iwd~~-~~~~~~~l~ 556 (604)
|+++-.+..|..|+.+ +++.+..+. ++ ......+.. ...++++ +|++.+ .+++..+||.. +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai-~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTI-YYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEE-EECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEE-EecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999999888888855 244554442 21 123344432 2234444 666665 57899999997 677777774
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.76 E-value=0.028 Score=60.37 Aligned_cols=224 Identities=7% Similarity=-0.033 Sum_probs=141.7
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCeeeeeec---eeEEE
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG-GIRGQFYQCDIEGQVLDSWEG---VRVNC 436 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~---~~v~~ 436 (604)
+|+.+... .|+..++.+......+....-..+..++|++.+..++.+ ..++.|..+++++.....+.. .....
T Consensus 8 ~Ll~s~~~---~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFSRRA---DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp EEEEEETT---EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred EEEEEeCC---cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 45554433 599999987654443332333468899999966665544 557899999998754433322 25778
Q ss_pred EEEcCCCCEEEEE-eCCCeEEEEEcCCCcccccc-cCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCCceeeEeec
Q psy10566 437 LWCRSDGKSVLAA-DTHHRIRTYNFEHLTDSNLL-QEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 437 l~~s~~g~~l~~~-~~dg~I~i~d~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~~~~~~~~~ 512 (604)
+++.+.+..|+.+ ...+.|.+.++.......+. ..-.....++++|....|+.+.. .+.|...++...........
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~ 164 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN 164 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC
Confidence 9998776655555 45678999998765443333 33456789999997666666653 56788888765443322222
Q ss_pred cccceEEEEeeeCCCC-CcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 513 VTQGQFTIHSCFGGAN-QDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 513 ~~~~~~~i~~~~~~~~-~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
-..... +..+++ +++.++-...+.|..+|+..... ..+...-....++++.. +.++++-...+.|...|..+
T Consensus 165 -~~~P~G---lalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 165 -VGRANG---LTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp -CSSEEE---EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTT
T ss_pred -CCCcce---EEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCC
Confidence 222222 233454 44445555678899999875444 34444444567888874 46777766788888888766
Q ss_pred CCC
Q psy10566 592 NTN 594 (604)
Q Consensus 592 ~~~ 594 (604)
+..
T Consensus 238 g~~ 240 (628)
T 4a0p_A 238 GQN 240 (628)
T ss_dssp CCS
T ss_pred CCc
Confidence 653
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.0049 Score=63.60 Aligned_cols=204 Identities=8% Similarity=0.088 Sum_probs=115.9
Q ss_pred cEEEEEEcCC-CC-eEEEEECCCeEEEEEeCCCCceeEeeEEecc-CCCCeeEEEE-------CCCCCeEEEEeCCC---
Q psy10566 303 EVWFCKFSPD-GL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLEG-HTLGVAYLAW-------SPDSSHLLVVGPED--- 369 (604)
Q Consensus 303 ~V~~v~fspd-g~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~-------spd~~~l~s~~~d~--- 369 (604)
....|+|+|. +. ++++....+.|++.|.+ ......+..... .......++| ++++..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~--~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLK--NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETT--TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECC--CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 4678999983 44 44444434567777776 323222222111 2235889999 99999777766543
Q ss_pred --ceEEEEEECCC-ceEE-----EEecCCCCCCeEEEEEecC-CCEEEEEecCCeEEEEEcC-------CCee-------
Q psy10566 370 --CHELWVWNIET-ELLR-----VKLNHSPEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIE-------GQVL------- 426 (604)
Q Consensus 370 --~~~i~vwd~~~-~~~~-----~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~-------~~~~------- 426 (604)
...|.+++... +... ..+. . ......++++|+ +..+++-..++.|..+|++ ...+
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~-~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA-A-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE-E-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred ccCceEEEEecCCCCceeecccceeec-c-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 12466775443 1211 1111 0 123457788995 5555566677889999986 2222
Q ss_pred -----ee-e--e-ceeEEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCc--c---cccccC---------------CCCee
Q psy10566 427 -----DS-W--E-GVRVNCLWCRSDGKSVLAA-DTHHRIRTYNFEHLT--D---SNLLQE---------------DHPVM 476 (604)
Q Consensus 427 -----~~-~--~-~~~v~~l~~s~~g~~l~~~-~~dg~I~i~d~~~~~--~---~~~~~~---------------~~~i~ 476 (604)
.. + . ......++++|+|+.++.+ +..+.|+.++..... . ..+... -....
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 11 1 1 1245789999999965554 566789997654321 1 011110 01233
Q ss_pred -EEEEC-------CCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 477 -SFTID-------ATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 477 -~~~~s-------~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
.++.. +++.+.++-..++.|+.++ .++ .+.++.+
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG 417 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAG 417 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEE
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEec
Confidence 45554 4566666667788899998 455 4445543
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.75 E-value=0.034 Score=53.28 Aligned_cols=253 Identities=15% Similarity=0.158 Sum_probs=155.7
Q ss_pred CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEec
Q psy10566 323 TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNR 402 (604)
Q Consensus 323 g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 402 (604)
..|.|-|+...... ..+... --+.-.+|..+.++.-. .. ++.++|+++...+..+.. ...|.--.|-.
T Consensus 49 ~~VvIiDl~n~~~~--~Rrpi~-----AdsAIMnP~~~ViALra-g~--~LQiFnletK~klks~~~--~e~VvfWkWis 116 (365)
T 2xzh_A 49 AQVVIIDMNDPSNP--IRRPIS-----ADSAIMNPASKVIALKA-GK--TLQIFNIEMKSKMKAHTM--TDDVTFWKWIS 116 (365)
T ss_dssp EEEEEEETTSTTSC--EEEECC-----CSEEEECSSSSEEEEEE-TT--EEEEEETTTTEEEEEEEC--SSCEEEEEECS
T ss_pred CEEEEEECCCCCCc--cccccc-----cceeeeCCCccEEEEec-CC--eEEEechHHhhhhcceec--CCccEEEEecC
Confidence 36777787732221 111121 12344688888777665 33 799999999988887763 35687777875
Q ss_pred CCCEEEEEecCCeEEEEEcCC--Ceeeeeece------eEEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCcccc
Q psy10566 403 DGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV------RVNCLWCRSDGKSVLAADT-------HHRIRTYNFEHLTDSN 467 (604)
Q Consensus 403 ~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~------~v~~l~~s~~g~~l~~~~~-------dg~I~i~d~~~~~~~~ 467 (604)
+.. ++..+ +..|+.|++++ ...+.+..+ +|.....+++.++++..+- .|.+.+|..+......
T Consensus 117 ~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ 194 (365)
T 2xzh_A 117 LNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP 194 (365)
T ss_dssp SSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE
T ss_pred CCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce
Confidence 543 33332 56799999964 555555543 7889999999998776543 3678999988766555
Q ss_pred cccCCCCeeEEEECCC---CCEEEEEec---CCeEEEEecCCC---cee--e---E--eeccccceEEEEeeeCCCCCcE
Q psy10566 468 LLQEDHPVMSFTIDAT---DRLALLNVS---TQGVHLWDLRDR---ILL--R---K--FQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 468 ~~~~~~~i~~~~~s~~---~~~l~~~~~---dg~I~lwd~~~~---~~~--~---~--~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
+-+|......+.+..+ ...++.+.. .+.+++.++... ... + . +.......+.+..-. ++.-..
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqv-s~kygv 273 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHDV 273 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEE-ETTTTE
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEe-cccCCE
Confidence 5444333322222211 122333322 257899988442 110 0 0 111122344444333 355568
Q ss_pred EEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
++.-+.-|.|++||+.++.++..-+-...+|...+-+.. ..=++.....|.|.--.++.
T Consensus 274 iyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~-~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 274 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGG-GTEEEEEETTCEEEEEEECT
T ss_pred EEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCC-CCcEEEEcCCCEEEEEEECc
Confidence 888889999999999999999988877777776666554 23344555777776555544
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.72 E-value=0.016 Score=55.98 Aligned_cols=202 Identities=11% Similarity=0.036 Sum_probs=127.1
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeC-CCceEEEEEECCCceEEEEecCC----C--CCCeEEEEE---ecCCCEEEEEec
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGP-EDCHELWVWNIETELLRVKLNHS----P--EDSLTSCSW---NRDGTKFVCGGI 412 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~-d~~~~i~vwd~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~l~s~~~ 412 (604)
+.....-..+++|.+....+..++. .+ +|..||...+......... . ...+..+.| .|+++.+++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g--~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKG--RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTT--EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCC--EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 3334444567899887667777664 55 8999999866433332211 1 113679999 688777775442
Q ss_pred -------------CCeEEEEEcC----CCeeeeee------c---------eeEEEEEEcCCCCEEEEEeCC-CeEEEEE
Q psy10566 413 -------------RGQFYQCDIE----GQVLDSWE------G---------VRVNCLWCRSDGKSVLAADTH-HRIRTYN 459 (604)
Q Consensus 413 -------------dg~i~iwd~~----~~~~~~~~------~---------~~v~~l~~s~~g~~l~~~~~d-g~I~i~d 459 (604)
+..+..||+. ++.+.... + .....++..++|+..++++.. +.|..++
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 6789999988 66554332 1 248899999999999999888 8888877
Q ss_pred cCCCccccccc------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCcee-eEee--cc---ccceEEEEeeeCCC
Q psy10566 460 FEHLTDSNLLQ------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILL-RKFQ--GV---TQGQFTIHSCFGGA 527 (604)
Q Consensus 460 ~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~-~~~~--~~---~~~~~~i~~~~~~~ 527 (604)
........... .....+.++++|+++.|++....+.+..+|+.+.... .... +. -.....+ +....
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgi--lp~~~ 243 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKI--VTVPV 243 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEE--EEEEE
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccc--ccccc
Confidence 76543221111 1223679999999999999988999999998853220 1111 21 1111222 11124
Q ss_pred CCcE-EEEEeCCCcEEEEeCCC
Q psy10566 528 NQDF-VASGSEDGKVYIWHVKR 548 (604)
Q Consensus 528 ~~~~-l~sgs~dg~I~iwd~~~ 548 (604)
+|+. +++.+..+.+.+.+...
T Consensus 244 ~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSST
T ss_pred CCEEEEEEcCCCCEEEEECCCC
Confidence 6666 55555566666666554
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.67 E-value=0.018 Score=57.23 Aligned_cols=149 Identities=12% Similarity=0.193 Sum_probs=83.3
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCC---CCeEEEEeCC----C
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPD---SSHLLVVGPE----D 369 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd---~~~l~s~~~d----~ 369 (604)
-...+.|+|.|+|++|..+...|.|++++.+ ......+..+ .........|+|+|+ +..|..+... +
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3467899999999934445578999998743 1111111111 122356789999996 4455444321 1
Q ss_pred --ceEEEEEECCCc-----e--EEEE-ecC--CCCCCeEEEEEecCCCEEEEEec-------------CCeEEEEEcCCC
Q psy10566 370 --CHELWVWNIETE-----L--LRVK-LNH--SPEDSLTSCSWNRDGTKFVCGGI-------------RGQFYQCDIEGQ 424 (604)
Q Consensus 370 --~~~i~vwd~~~~-----~--~~~~-~~~--~~~~~v~~~~~~~~~~~l~s~~~-------------dg~i~iwd~~~~ 424 (604)
...|..|+...+ . .+.. +.. ........++|.|||.++++.+. .|.|.-++.+++
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 125777776533 1 1111 110 01112457999999976666543 257878887765
Q ss_pred e-------------eeee-ece-eEEEEEEcCCCCEEEEEeC
Q psy10566 425 V-------------LDSW-EGV-RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 425 ~-------------~~~~-~~~-~v~~l~~s~~g~~l~~~~~ 451 (604)
. ...+ .++ ....++|.+....|.++..
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 2 1222 233 5888999994444555443
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.66 E-value=0.00012 Score=80.28 Aligned_cols=235 Identities=7% Similarity=-0.015 Sum_probs=136.4
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC----ceEEEEecCCCCCCeEE
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET----ELLRVKLNHSPEDSLTS 397 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~----~~~~~~~~~~~~~~v~~ 397 (604)
.+.|++.++. .......+. ....+..++|.+.+..|+.+.... ..|+.+++.+ ......+. ........
T Consensus 385 ~~~I~~id~~----~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~-~~I~~~~~~g~~~~~~~~~~i~-~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLD----RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVIS-RDIQAPDG 457 (699)
T ss_dssp TTC-CEECTT----SCCEECCSC-CCTTCCCCEEETTTTEEEECCTTT-TSBEEEESCCCCC-CCCCCBCC-SCC--CCC
T ss_pred ccceEEEeCC----CCcceeeec-cCcceEEEccccccCeEEEEecCC-CeEEEEecCCCCCCcceEEEEe-CCCCCcce
Confidence 4567777766 111112222 234567899999877777765543 3799999875 22111111 11123567
Q ss_pred EEEecCC-CEEEEEecCCeEEEEEcCCCeeeeeec---eeEEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCccccccc-
Q psy10566 398 CSWNRDG-TKFVCGGIRGQFYQCDIEGQVLDSWEG---VRVNCLWCRSDGKSVLAADT--HHRIRTYNFEHLTDSNLLQ- 470 (604)
Q Consensus 398 ~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~v~~l~~s~~g~~l~~~~~--dg~I~i~d~~~~~~~~~~~- 470 (604)
+++.+.+ +.+++-...+.|.++++++.....+.. .....+++.|.+..|+.+.. .+.|..+++.......+..
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 8888644 445554567899999998776554432 35678899987666665543 2678888876543333322
Q ss_pred CCCCeeEEEECCCCCEEEEE-ecCCeEEEEecCCCceeeEeecc--ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 471 EDHPVMSFTIDATDRLALLN-VSTQGVHLWDLRDRILLRKFQGV--TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~-~~dg~I~lwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.-.....++++|++..|+++ ...+.|..+|+........+... ......+. .. . +.++++....+.|..+|..
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gla--vd-~-~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA--VF-E-DKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCE--EE-T-TEEEEECSTTTCEEEEETT
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeE--EE-C-CEEEEEeCCCCeEEEEEcc
Confidence 23456789999886655555 45678999998653222222111 11111221 11 2 3455666667899999988
Q ss_pred CCcceEEeeCCCCCeeEEEE
Q psy10566 548 RELPIATLSGHTRTVSCVAW 567 (604)
Q Consensus 548 ~~~~~~~l~~h~~~V~~v~~ 567 (604)
+|+.+..+......+..|++
T Consensus 614 ~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 614 TGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp TEEEEECCCTTCSSCCCCCB
T ss_pred CCCceEEeecCCCCCcEEEE
Confidence 88877776543333445544
No 307
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.66 E-value=0.06 Score=53.66 Aligned_cols=254 Identities=15% Similarity=0.156 Sum_probs=159.6
Q ss_pred CCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe
Q psy10566 322 DTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN 401 (604)
Q Consensus 322 dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 401 (604)
+..|.|-|+...... ..+.+. --+.-.+|..+.++.=. .. ++.++|+++...+..+.. ...|..-.|-
T Consensus 47 ~~~vvIiDl~~~~~~--~rrpi~-----AdsAIMnP~~~iiALra-g~--~lQiFnle~K~klks~~~--~e~VvfWkWi 114 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNP--IRRPIS-----ADSAIMNPASKVIALKA-GK--TLQIFNIEMKSKMKAHTM--TDDVTFWKWI 114 (494)
T ss_dssp CCEEEEEETTSTTSC--EEEECC-----CSEEEECSSSSCEEEEE-TT--EEEEEETTTTEEEEEEEC--SSCCCEEEEE
T ss_pred CCeEEEEECCCCCcc--eecccc-----cceeeeCCCCcEEEEec-CC--eEEEEchHHhhhhcceec--CCCceEEEec
Confidence 346788887732221 111221 22445788888777765 33 799999999988877763 3457777777
Q ss_pred cCCCEEEEEecCCeEEEEEcCC--Ceeeeeece------eEEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCccc
Q psy10566 402 RDGTKFVCGGIRGQFYQCDIEG--QVLDSWEGV------RVNCLWCRSDGKSVLAADT-------HHRIRTYNFEHLTDS 466 (604)
Q Consensus 402 ~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~------~v~~l~~s~~g~~l~~~~~-------dg~I~i~d~~~~~~~ 466 (604)
.+... +.. .+..|+.|++++ ...+.+..+ .|.....+++.++++..+- .|.+.+|..+.....
T Consensus 115 s~~~l-~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ 192 (494)
T 1bpo_A 115 SLNTV-ALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ 192 (494)
T ss_dssp ETTEE-EEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE
T ss_pred CCCeE-EEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc
Confidence 55433 332 356899999954 556666543 7889999999999775543 377899998877665
Q ss_pred ccccCCCCeeEEEECCCC---CEEEEEec---CCeEEEEecCCC---ce-e----eE--eeccccceEEEEeeeCCCCCc
Q psy10566 467 NLLQEDHPVMSFTIDATD---RLALLNVS---TQGVHLWDLRDR---IL-L----RK--FQGVTQGQFTIHSCFGGANQD 530 (604)
Q Consensus 467 ~~~~~~~~i~~~~~s~~~---~~l~~~~~---dg~I~lwd~~~~---~~-~----~~--~~~~~~~~~~i~~~~~~~~~~ 530 (604)
.+-+|......+.+..+. ..+..+.. .+.+++.++... .. . .. +.......+.+..-. ++.-.
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqv-s~kyg 271 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI-SEKHD 271 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEE-ETTTT
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEe-cccCC
Confidence 555554444333333221 23333333 268999998543 11 0 00 111122334444333 45666
Q ss_pred EEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 531 ~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
.++.-+.-|.|++||+.++.++..-+-...+|..-+-+.. ..=++.....|.|.--.++.
T Consensus 272 viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~-~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA-TAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT-TTEEEEEETTCEEEEEEECT
T ss_pred EEEEEecCceEEEEecccceeeeeecccCCceEEecccCC-CCcEEEEccCceEEEEEEcc
Confidence 8888899999999999999999988877777877666665 33444555777776555544
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.65 E-value=0.047 Score=52.27 Aligned_cols=230 Identities=14% Similarity=0.175 Sum_probs=144.3
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LRV 385 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~ 385 (604)
.-.+|..+.+|.-. ..++.|+|++ +...++.+.- ...|..=.|-.+. .|+..+.. .|+-|+++... +..
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnle----tK~klks~~~-~e~VvfWkWis~~-~L~lVT~t---aVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIE----MKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN---AVYHWSMEGESQPVK 141 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETT----TTEEEEEEEC-SSCEEEEEECSSS-EEEEEESS---EEEEEESSTTCCCEE
T ss_pred eeeCCCccEEEEec-CCeEEEechH----Hhhhhcceec-CCccEEEEecCCC-eEEEEcCC---cEEEEcccCCCCCce
Confidence 44588888777765 6789999998 4344455443 3578777886554 55555655 59999997543 333
Q ss_pred EecCC---CCCCeEEEEEecCCCEEEEEec-------CCeEEEEEcCCCeeeeeeceeEEEEEEcCCCC-----EEEEEe
Q psy10566 386 KLNHS---PEDSLTSCSWNRDGTKFVCGGI-------RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK-----SVLAAD 450 (604)
Q Consensus 386 ~~~~~---~~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~-----~l~~~~ 450 (604)
.+... ....|..-..+++.++++..+- .|.+.+|..+.+.-+.+++|...-..+-.+|+ .+..+.
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 221 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred eeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEE
Confidence 33211 1345777777888898776553 36889999999999999988655555544443 223222
Q ss_pred C---CCeEEEEEcCCCc-cccc---------ccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 451 T---HHRIRTYNFEHLT-DSNL---------LQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 451 ~---dg~I~i~d~~~~~-~~~~---------~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
. .+++++.++.... .... +.. ..-..++.+++....++.-+.-|.|++||+.++.++..-.-..
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~ 301 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 301 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC
Confidence 2 2689999985531 1111 111 2334567778888899999999999999999999886655444
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
..++.. +.....+ =+++....|.|.--.++..
T Consensus 302 d~iF~t--a~~~~~~-Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 302 ETIFVT--APHEATA-GIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp SCEEEE--EEEGGGT-EEEEEETTCEEEEEEECTT
T ss_pred CceEEe--cccCCCC-cEEEEcCCCEEEEEEECcc
Confidence 433222 2211222 2334446666655555443
No 309
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=97.64 E-value=4.8e-05 Score=57.06 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccC
Q psy10566 82 MTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLD 118 (604)
Q Consensus 82 ~~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~ 118 (604)
|++++.||.+||..||+|.||..||.+|++||.+.-.
T Consensus 1 msitsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~ 37 (90)
T 2xtc_A 1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQS 37 (90)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGS
T ss_pred CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCcc
Confidence 5788999999999999999999999999999997654
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.59 E-value=0.071 Score=52.83 Aligned_cols=224 Identities=9% Similarity=-0.023 Sum_probs=122.4
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EEEEec--CCCCCCeEEEEEecC---CCEEEEEec----C----
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LRVKLN--HSPEDSLTSCSWNRD---GTKFVCGGI----R---- 413 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~~~~~--~~~~~~v~~~~~~~~---~~~l~s~~~----d---- 413 (604)
.....++|.|+|+.+++ ...+ .|++++. ++. .+..+. .........++|+|+ +..|.++.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g--~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPG--RLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTT--EEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCC--EEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45789999999975554 5555 7998873 454 222211 112345889999997 555554433 3
Q ss_pred CeEEEEEcCCC---------eeeeee---ceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCCc----
Q psy10566 414 GQFYQCDIEGQ---------VLDSWE---GVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHLT---- 464 (604)
Q Consensus 414 g~i~iwd~~~~---------~~~~~~---~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~---- 464 (604)
..|..|+.++. .+..+. .|....++|.|||...++.+. .|.|..++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 57777877543 111122 234567999999986666432 2466666654321
Q ss_pred ---cccccc-CCCCeeEEEECC-CCCEEEEEecCC---eEEEEecCC--------C--------ceeeEe-eccccceEE
Q psy10566 465 ---DSNLLQ-EDHPVMSFTIDA-TDRLALLNVSTQ---GVHLWDLRD--------R--------ILLRKF-QGVTQGQFT 519 (604)
Q Consensus 465 ---~~~~~~-~~~~i~~~~~s~-~~~~l~~~~~dg---~I~lwd~~~--------~--------~~~~~~-~~~~~~~~~ 519 (604)
...+.. .......++|+| ++.+.++-...+ .|.+...-. + .++..+ ..+. ....
T Consensus 185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~-ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETW-APSG 263 (354)
T ss_dssp SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC-CEEE
T ss_pred CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCc-CCcc
Confidence 011111 123356899999 565544433322 244332110 0 112222 1111 1112
Q ss_pred EEeeeC------CCCCcEEEEEeCCCcEEEEeCCCC-cce--EEe-eCCCCCeeEEEEcCCCCcEEEEEe
Q psy10566 520 IHSCFG------GANQDFVASGSEDGKVYIWHVKRE-LPI--ATL-SGHTRTVSCVAWNPVYHQMIASVS 579 (604)
Q Consensus 520 i~~~~~------~~~~~~l~sgs~dg~I~iwd~~~~-~~~--~~l-~~h~~~V~~v~~sp~~~~~l~s~s 579 (604)
+ .+. ..+|.++++.-..+.|...++... +.. ..+ .+-...+..+++.|+ +.++++..
T Consensus 264 ~--~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G~lyv~~~ 330 (354)
T 3a9g_A 264 A--SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-GGILISTS 330 (354)
T ss_dssp E--EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-SCEEEEEC
T ss_pred e--EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-CcEEEEEe
Confidence 2 221 246777777767788988888753 322 223 222457899999999 56666654
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.52 E-value=0.094 Score=52.29 Aligned_cols=232 Identities=14% Similarity=0.165 Sum_probs=145.9
Q ss_pred EEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce-EE
Q psy10566 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL-LR 384 (604)
Q Consensus 306 ~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~-~~ 384 (604)
+.-.+|..+.+|.=. ..++.|+|++ ....++.+.- ...|..=.|-.+. .|+..+.. .|+-|++.... +.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle----~K~klks~~~-~e~VvfWkWis~~-~l~lVT~t---aVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIE----MKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN---AVYHWSMEGESQPV 139 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETT----TTEEEEEEEC-SSCCCEEEEEETT-EEEEECSS---EEEEEESSSSCCCE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchH----Hhhhhcceec-CCCceEEEecCCC-eEEEEcCC---eeEEecccCCCCch
Confidence 345678888777665 7899999998 3344455443 3467777776443 56666655 59999997543 33
Q ss_pred EEecCC---CCCCeEEEEEecCCCEEEEEec-------CCeEEEEEcCCCeeeeeeceeEEEEEEcCCCC-----EEEEE
Q psy10566 385 VKLNHS---PEDSLTSCSWNRDGTKFVCGGI-------RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGK-----SVLAA 449 (604)
Q Consensus 385 ~~~~~~---~~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~-----~l~~~ 449 (604)
..+... ....|..-..+++.++++..|- .|.+.+|..+.+.-+.+++|...-..+-.+|+ .+..+
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 219 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEE
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEE
Confidence 333211 1345777778889998876543 46889999998888888888655444444432 23333
Q ss_pred eC---CCeEEEEEcCCCc-cccc---------ccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeecc
Q psy10566 450 DT---HHRIRTYNFEHLT-DSNL---------LQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513 (604)
Q Consensus 450 ~~---dg~I~i~d~~~~~-~~~~---------~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~ 513 (604)
.. .+++++.++.... .... +.. ..-..++.+++....++.-+.-|.|++||+.++.++..-.-.
T Consensus 220 ~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp ECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc
Confidence 33 2789999986531 1100 111 233457888888899999999999999999999988665544
Q ss_pred ccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc
Q psy10566 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL 550 (604)
Q Consensus 514 ~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~ 550 (604)
...++. . +.....+ =+++....|.|.--.++...
T Consensus 300 ~~~iF~-t-~~~~~~~-Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 300 GETIFV-T-APHEATA-GIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp SSCEEE-E-EEETTTT-EEEEEETTCEEEEEEECTTT
T ss_pred CCceEE-e-cccCCCC-cEEEEccCceEEEEEEcccc
Confidence 443332 1 2222233 34444466766655555433
No 312
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.41 E-value=0.063 Score=51.78 Aligned_cols=246 Identities=7% Similarity=-0.004 Sum_probs=138.8
Q ss_pred cCCCCeEEEEE--CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC------------ceEEEE
Q psy10566 310 SPDGLKLATGS--KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED------------CHELWV 375 (604)
Q Consensus 310 spdg~~lasgs--~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~------------~~~i~v 375 (604)
+.+|.+|.... .++.|...+.+ .... ..+... .+--++++|.+|..+.... ...|+.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d--g~~~---~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID--GSNI---HKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT--SCSC---EEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC--CCCC---EEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 35666666554 24545544443 2222 222211 1334578898888876542 246888
Q ss_pred EECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEe----cCCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEEeC
Q psy10566 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG----IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 376 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~~~ 451 (604)
.++..+....... . .+..|+++++.|+-.. ....|+..+++|.....+....+ ..++++++.|+..+.
T Consensus 93 i~~dg~~~~~l~~----~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 93 IKRNGHGSTVLDP----D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EETTSCCCEEEEC----S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEETTEEEEECT
T ss_pred EeCCCCcceEeec----C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEECCEEEEEeC
Confidence 8888776433322 1 1337788898888776 34466777777766665655544 456788888887766
Q ss_pred -CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEecC--CeEEEEecCCCceeeEeeccccceEEEEeeeCCCC
Q psy10566 452 -HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST--QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 452 -dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
...|...++.......+.. .... ..+.|++.+|+-.... ..|..-++..... ..+.... + .+++|+
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~~~-----~--~~~~~~ 233 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTEAN-----I--EHYNVY 233 (302)
T ss_dssp TTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSCSC-----E--EEEEEE
T ss_pred CCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeCCC-----c--ceEEEC
Confidence 5678888887765444433 2222 3456889888876654 3577777765542 2332111 1 123467
Q ss_pred CcEEEEEeC--CCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 529 QDFVASGSE--DGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 529 ~~~l~sgs~--dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
+++|+-++. .+.|..-++.... ...+... .+..+.. .+..+..+--..+.|..-+
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~DG~~-r~~l~~~--~~~~i~i--~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKNDGTG-FKELAKG--EFCNINV--TSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCC-CEEEEES--CEEEEEE--CSSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCCc-cEEeeCC--ccceEEE--eCCEEEEEECCCCeEEEEE
Confidence 777776533 3566666665433 3333221 2444444 4345555554556554434
No 313
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.33 E-value=0.00082 Score=73.53 Aligned_cols=208 Identities=7% Similarity=-0.071 Sum_probs=122.4
Q ss_pred CcEEEEEEcCCCCeEEEE-ECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCC
Q psy10566 302 DEVWFCKFSPDGLKLATG-SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET 380 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasg-s~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~ 380 (604)
..+..++|++.+..|..+ ...+.|..+++............+.........|++.+.+..|+.+.... ..|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~-~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-GTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTT-SCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccC-CeEEEEecCC
Confidence 346678999876655544 35578888887621000111111111123356788886555555543332 3799999876
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCeeeeee---ceeEEEEEEcCCCCEEEEEe-CCCe
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI--RGQFYQCDIEGQVLDSWE---GVRVNCLWCRSDGKSVLAAD-THHR 454 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~---~~~v~~l~~s~~g~~l~~~~-~dg~ 454 (604)
......+. ........+++.|.+.+|+.+.. .+.|..++++|.....+. ....+.+++++++..|+.+. ..+.
T Consensus 485 ~~~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 485 VKRKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp CCEEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CceEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 65443333 22234678899996665555443 278888888776544432 12467899998766655554 5678
Q ss_pred EEEEEcCCCcccccccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeec
Q psy10566 455 IRTYNFEHLTDSNLLQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQG 512 (604)
Q Consensus 455 I~i~d~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~ 512 (604)
|..+++.......+... ......+++..+ .++++....+.|..+|..+++.+..+..
T Consensus 564 I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 564 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred EEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 99999876443333321 123345555543 4444555667899999888877666643
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.33 E-value=0.17 Score=58.34 Aligned_cols=211 Identities=10% Similarity=0.080 Sum_probs=119.1
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEec---C-CCEEEEEe----------cCCeEEEEEcCCCeeeeeece----e
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNR---D-GTKFVCGG----------IRGQFYQCDIEGQVLDSWEGV----R 433 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~----~ 433 (604)
.|++.|..+.+.+..+.......+.+++... + ..++++|+ ..|.|.+|++.+..++..... .
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 5778888888777666655556666666432 2 46888876 357899999865445444332 4
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC--CCceeeEe
Q psy10566 434 VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR--DRILLRKF 510 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~--~~~~~~~~ 510 (604)
+.+++-. +| +++++ ...+|++|++...+.... ...-..+..+.+...++++++|..-..|.++..+ .++ +..+
T Consensus 888 v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~~ 963 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLAS-INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-FEEI 963 (1158)
T ss_dssp EEEEEEE-TT-EEEEE-ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-EEEE
T ss_pred CEEEeee-CC-EEEEE-cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-EEEE
Confidence 6665543 34 44444 357899999976543221 1111113333343457788888887777665443 332 2222
Q ss_pred eccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC-------cce-EEeeCC-CCCeeEEE---EcCCC-------
Q psy10566 511 QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE-------LPI-ATLSGH-TRTVSCVA---WNPVY------- 571 (604)
Q Consensus 511 ~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~-------~~~-~~l~~h-~~~V~~v~---~sp~~------- 571 (604)
...........+.+. +...++.+..+|.|.+...... +.+ ..-.-| ...|+++. +.+.+
T Consensus 964 a~D~~~~~vta~~~l--d~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~ 1041 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEIL--DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTP 1041 (1158)
T ss_dssp EECCSCBCEEEEEEE--ETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------C
T ss_pred EeecccccEEEEEEE--ccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCcccccc
Confidence 222222222222222 2347788899999999876531 112 121223 34577765 33321
Q ss_pred -CcEEEEEeCCCcEEEEC
Q psy10566 572 -HQMIASVSDDCTVRIWG 588 (604)
Q Consensus 572 -~~~l~s~s~Dg~I~iW~ 588 (604)
...++-++.+|.|-+.-
T Consensus 1042 ~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 1042 TQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp EEEEEEEEETTSCEEEEE
T ss_pred ccceEEEEecCCEEEEEE
Confidence 23577788899887653
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.31 E-value=0.016 Score=56.00 Aligned_cols=230 Identities=10% Similarity=0.087 Sum_probs=116.6
Q ss_pred CCCeEEEEE-CC-----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC---ceEEEEEECCCce
Q psy10566 312 DGLKLATGS-KD-----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED---CHELWVWNIETEL 382 (604)
Q Consensus 312 dg~~lasgs-~d-----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~---~~~i~vwd~~~~~ 382 (604)
++.+++.|+ .+ ..+.+||.. +.....+..+........++. -++..++.+|.++ ...+++||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPK--TQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETT--TTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCC--CCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 345566665 32 357788876 444444433332222222222 3566677776542 1259999998876
Q ss_pred ---EEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC
Q psy10566 383 ---LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 383 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~ 451 (604)
....-.......-.+++. .+++.++.|+.++ .+.+||+........... +....+...+++.++.|+.
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred CCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCC
Confidence 333222111111112222 2677777777543 688889865544433221 1111122226677777765
Q ss_pred C-----CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEE
Q psy10566 452 H-----HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFT 519 (604)
Q Consensus 452 d-----g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~ 519 (604)
+ ..+.+||..+.+-..... ....-.+++. .+++.++.|+.+ ..+.+||+.+.+-... .........
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV-TSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC-CCCCCcccc
Confidence 4 458899987754332211 1111112222 256777777664 4689999987643322 111111111
Q ss_pred EEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy10566 520 IHSCFGGANQDFVASGSED-----GKVYIWHVKREL 550 (604)
Q Consensus 520 i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~ 550 (604)
..++. .++++++.|+.+ ..|.+||..+.+
T Consensus 247 ~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 247 VGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred eeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11122 256777777765 357888887653
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.28 E-value=0.094 Score=51.92 Aligned_cols=230 Identities=10% Similarity=0.065 Sum_probs=121.4
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec------CCCCCCeEEEEEecC---CCEEEEEe-c------
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN------HSPEDSLTSCSWNRD---GTKFVCGG-I------ 412 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~---~~~l~s~~-~------ 412 (604)
....|+|.|+|+.++++...+ .|++++.. +.....+. .........++|+|+ +..|.++. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G--~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGG--ELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTT--EEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEEeCCc--eEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 468999999998444555666 89999854 33211111 112345789999996 44444443 2
Q ss_pred -CCeEEEEEcCCC--ee-------eeee-----ceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCCc
Q psy10566 413 -RGQFYQCDIEGQ--VL-------DSWE-----GVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHLT 464 (604)
Q Consensus 413 -dg~i~iwd~~~~--~~-------~~~~-----~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~~ 464 (604)
...|..|+.+.. .+ ..+. .|....++|.|||...++.+. .|.|.-++.....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666321 11 1111 234567999999966555433 2567777765431
Q ss_pred ------------cccccc-CCCCeeEEEECCCCCEEEEEecCC----eEEEEecCCCc----------------------
Q psy10566 465 ------------DSNLLQ-EDHPVMSFTIDATDRLALLNVSTQ----GVHLWDLRDRI---------------------- 505 (604)
Q Consensus 465 ------------~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg----~I~lwd~~~~~---------------------- 505 (604)
...+.. .......++|+|....|.++.... .|.+ +..+.
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~--i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINI--PQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEEC--CCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeE--eccCCcCCCCCccCCCCCCCCccCccc
Confidence 111222 123467899999433444443321 2322 11111
Q ss_pred ---------eeeEeeccccceEEEEeeeCC------CCCcEEEEEeCCCcEEEEeCCCCcceEE--e-eCCCCCeeEEEE
Q psy10566 506 ---------LLRKFQGVTQGQFTIHSCFGG------ANQDFVASGSEDGKVYIWHVKRELPIAT--L-SGHTRTVSCVAW 567 (604)
Q Consensus 506 ---------~~~~~~~~~~~~~~i~~~~~~------~~~~~l~sgs~dg~I~iwd~~~~~~~~~--l-~~h~~~V~~v~~ 567 (604)
++..+..+. ....+ .+.. .+|+++++.-..+.|...++..++.+.. + ......+..+++
T Consensus 254 ~~~~~~~~~P~~~~~~~~-ap~G~--~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDSP-AVSGM--AFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp BSSCTTSCCCSEEESSCC-CEEEE--EEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred CCCCCCccCCeEEeCCCc-Cccee--EEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 011111111 11112 2211 2577777777788888888876554332 2 222357899999
Q ss_pred cCCCCcEEEEEe-CCCcEEEECC
Q psy10566 568 NPVYHQMIASVS-DDCTVRIWGP 589 (604)
Q Consensus 568 sp~~~~~l~s~s-~Dg~I~iW~~ 589 (604)
.|+ +.++++.. .+| +||.+
T Consensus 331 ~pd-G~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 331 GPD-GYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp CTT-SCEEEEECSTTE--EEEEE
T ss_pred CCC-CcEEEEEeCCCC--EEEEE
Confidence 999 55555432 344 44443
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.28 E-value=0.16 Score=49.77 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=71.9
Q ss_pred CccceeecccCCCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe----ccCCCCeeEEEECCC---CCeE
Q psy10566 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL----EGHTLGVAYLAWSPD---SSHL 362 (604)
Q Consensus 290 p~~~~~~l~~H~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l----~~h~~~V~~l~~spd---~~~l 362 (604)
+...+.++...-...+.++|.|||+++++--..|.|++++.. .+....+..+ .........|+|+|+ +..|
T Consensus 20 ~~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~--~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~l 97 (347)
T 3das_A 20 SVKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAK--TGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMV 97 (347)
T ss_dssp CEEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTT--TCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEE
T ss_pred CCceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECC--CCcEeeecccCceeecCCCCceeeEeccccccCCEE
Confidence 344555565566788999999999977766448999888754 2233333322 223567899999995 3444
Q ss_pred EE-EeCCCceEEEEEECCCc----------eEEE-EecCCCCCCeEEEEEecCCCEEEEEec
Q psy10566 363 LV-VGPEDCHELWVWNIETE----------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGI 412 (604)
Q Consensus 363 ~s-~~~d~~~~i~vwd~~~~----------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~ 412 (604)
.. -+......|.-|....+ +.+. .+..........++|.|||.++++.+.
T Consensus 98 Yv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 98 YAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 33 22211136777766541 1222 222121223467899999987777553
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.24 E-value=0.039 Score=53.33 Aligned_cols=228 Identities=10% Similarity=0.098 Sum_probs=117.1
Q ss_pred CeEEEEECC--CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCC--ceEEEEEECCCceEEEEecC
Q psy10566 314 LKLATGSKD--TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED--CHELWVWNIETELLRVKLNH 389 (604)
Q Consensus 314 ~~lasgs~d--g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~--~~~i~vwd~~~~~~~~~~~~ 389 (604)
.+++.|+.+ ..+.+||.. +.++..+..+......-.++. -++..++.||.+. ...+.+||..++.....-..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPK--DYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETT--TTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred eEEEEeCCCCCceEEEecCC--CCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 345556543 467888877 445554443332222222232 2566666666541 12799999998865443221
Q ss_pred CCCCCeEEEEEecCCCEEEEEecC------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC---------
Q psy10566 390 SPEDSLTSCSWNRDGTKFVCGGIR------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT--------- 451 (604)
Q Consensus 390 ~~~~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~--------- 451 (604)
.....-.+++ .-+++.++.|+.+ ..+.+||............ +....+..-+++.++.|+.
T Consensus 89 p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 89 PTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEE
T ss_pred CccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccc
Confidence 1111111222 2367777888765 4688899876554443221 1111112235666666653
Q ss_pred CCeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEeee
Q psy10566 452 HHRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524 (604)
Q Consensus 452 dg~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~ 524 (604)
...+.+||..+..-...... ...-.+++.. +++.++.|+.+ ..+.+||+.+.+-.. +...........++.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM-VSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEE-CCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE-CCCCCCCccceeEEE
Confidence 34588999887643222211 1111122222 56677776653 358899988764221 111111111111122
Q ss_pred CCCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy10566 525 GGANQDFVASGSED-----GKVYIWHVKREL 550 (604)
Q Consensus 525 ~~~~~~~l~sgs~d-----g~I~iwd~~~~~ 550 (604)
-++.+++.|+.+ ..+.+||..+.+
T Consensus 246 --~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 246 --VGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp --ETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred --ECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 266788888754 468889988653
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.22 E-value=0.039 Score=53.20 Aligned_cols=229 Identities=12% Similarity=0.106 Sum_probs=114.9
Q ss_pred CCeEEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCCceEEE
Q psy10566 313 GLKLATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIETELLRV 385 (604)
Q Consensus 313 g~~lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~~~~~~ 385 (604)
+.+++.|+.+ ..+.+||.. +.....+..+......-..+.+ ++..++.||.++. ..+.+||..+.+...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFK--EERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCc--CCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 3455555543 357778876 3344443333322111122222 5666666664431 258999998876544
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC------
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT------ 451 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~------ 451 (604)
.-.......-.+++. -++..++.|+.++ .+.+||+........... +....+..-+++.++.|+.
T Consensus 92 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 92 VANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTE
T ss_pred CCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCc
Confidence 322111111122222 3677788887664 577888865544443221 1111112225666666654
Q ss_pred -CCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEee
Q psy10566 452 -HHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHSC 523 (604)
Q Consensus 452 -dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~ 523 (604)
...+.+||..+..-..... ....-.+++. -+++.++.|+.+ ..+.+||+.+.+-.. +...........++
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVC 248 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEE
Confidence 2458899987754322211 1111112222 256777777654 368999998764322 11111111111111
Q ss_pred eCCCCCcEEEEEeCCC-----cEEEEeCCCCc
Q psy10566 524 FGGANQDFVASGSEDG-----KVYIWHVKREL 550 (604)
Q Consensus 524 ~~~~~~~~l~sgs~dg-----~I~iwd~~~~~ 550 (604)
. .++.+++.|+.++ .+.+||..+.+
T Consensus 249 ~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 249 A--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 1 3567777777653 48888887654
No 320
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=97.13 E-value=0.00031 Score=52.31 Aligned_cols=57 Identities=14% Similarity=0.333 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHcCChHHHHHHHhh
Q psy10566 86 DEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMDGDWSKADHDLND 143 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~g~w~~~~~~l~~ 143 (604)
++|+.+-|++||..+||.+++.+|.+|.++..+.+... -...+++-+|..+.++-.+
T Consensus 10 ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~-ky~gLLEKKWTSViRLQKK 66 (88)
T 1uuj_A 10 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDK-KYAGLLEKKWTSVIRLQKK 66 (88)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHH-HHTTHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhh-hhhhhhhhhHHHHHHHHHH
Confidence 67999999999999999999999999999887743333 3456677789887775443
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.02 E-value=0.036 Score=53.56 Aligned_cols=225 Identities=11% Similarity=0.075 Sum_probs=117.4
Q ss_pred eEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCeeeeeece---e
Q psy10566 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR----GQFYQCDIEGQVLDSWEGV---R 433 (604)
Q Consensus 361 ~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~---~ 433 (604)
.++.||.+....+++||..+++....-.... ......+..-++..++.|+.+ ..+..||............ +
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFE-KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSC-CCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCc-ccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 4555655433369999999887543322111 111112222367777888765 5788889866554443321 1
Q ss_pred EEEEEEcCCCCEEEEEeCC------CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEec---------CCeE
Q psy10566 434 VNCLWCRSDGKSVLAADTH------HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVS---------TQGV 496 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~~d------g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~---------dg~I 496 (604)
....+..-+++.++.|+.+ ..+.+||..+..-...-. ....-.+++. .+++.++.|+. -..+
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCE
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceE
Confidence 1111222366677777654 458899988764322211 1111112222 25666666653 3458
Q ss_pred EEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcc--eEEeeCCCCCeeEEEEcC
Q psy10566 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELP--IATLSGHTRTVSCVAWNP 569 (604)
Q Consensus 497 ~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~--~~~l~~h~~~V~~v~~sp 569 (604)
.+||+.+.+-.. +...........++. .++++++.|+.+ ..+.+||..+.+- +..+........++.+
T Consensus 172 ~~yd~~~~~W~~-~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 172 EVYDPATETWTE-LCPMIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp EEEETTTTEEEE-ECCCSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred EEeCCCCCeEEE-CCCccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence 899988764322 111111111111111 256677777654 4688999887542 2122212222233333
Q ss_pred CCCcEEEEEeCC-----CcEEEECCCCCC
Q psy10566 570 VYHQMIASVSDD-----CTVRIWGPHLNT 593 (604)
Q Consensus 570 ~~~~~l~s~s~D-----g~I~iW~~~~~~ 593 (604)
+ +.+++.|+.+ ..+.+||+.+.+
T Consensus 247 ~-~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 G-SIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp T-TEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred C-CEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 3 6788888854 468888887754
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.02 E-value=0.39 Score=49.25 Aligned_cols=147 Identities=13% Similarity=0.149 Sum_probs=86.8
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc------CCCCeeEEEECCC---CCeEEEEeCC---
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG------HTLGVAYLAWSPD---SSHLLVVGPE--- 368 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~------h~~~V~~l~~spd---~~~l~s~~~d--- 368 (604)
-...+.++|.|+|+++++-...+.|++++.. ++....+..+.. .......|+|+|+ +..|.++...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~--~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPE--SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT--TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECC--CCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 4567899999999977765433468877654 233333333332 2456789999995 5555444321
Q ss_pred ----C----ceEEEEEECCCc-------eEEE-EecCCCCCCeEEEEEecCCCEEEEEec--------------------
Q psy10566 369 ----D----CHELWVWNIETE-------LLRV-KLNHSPEDSLTSCSWNRDGTKFVCGGI-------------------- 412 (604)
Q Consensus 369 ----~----~~~i~vwd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------------- 412 (604)
. ...|.-|+...+ +.+. .+..........++|.|||.++++.+.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~ 183 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPT 183 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccc
Confidence 0 125666665432 1222 122222234789999999998777553
Q ss_pred ------------CCeEEEEEcCCC-----------eeeeee-ce-eEEEEEEcCCCCEEEEE
Q psy10566 413 ------------RGQFYQCDIEGQ-----------VLDSWE-GV-RVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 413 ------------dg~i~iwd~~~~-----------~~~~~~-~~-~v~~l~~s~~g~~l~~~ 449 (604)
.|.|.-++.++. ....+. ++ ....++|.++|...++-
T Consensus 184 ~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d 245 (454)
T 1cru_A 184 QQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSE 245 (454)
T ss_dssp HHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEE
T ss_pred cccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEe
Confidence 245666666665 122222 33 58899999987755543
No 323
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.99 E-value=0.12 Score=50.18 Aligned_cols=226 Identities=8% Similarity=0.045 Sum_probs=115.0
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC-----CC----ceEEEEEECCCceEEE
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP-----ED----CHELWVWNIETELLRV 385 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~-----d~----~~~i~vwd~~~~~~~~ 385 (604)
+++.|+ ..+.+||.. +..... ..+..........+...++..++.||. .. ...++.||..+++...
T Consensus 7 l~~~GG--~~~~~yd~~--~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPA--ANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEEEEETT--TTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceEEECCC--CCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 344554 568889887 444443 333322222333344457778888873 11 1138899998876543
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecC--------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC-C-
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIR--------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT-H- 452 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~-d- 452 (604)
.-.......-.+++. -++..++.|+.+ ..+.+||............ +....+...+++.++.|+. +
T Consensus 82 ~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 82 MPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp CCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTT
T ss_pred CCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCC
Confidence 221111111112222 266777777742 3588889865544433221 1112222345667777765 2
Q ss_pred ----CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecCC-----eEEEEecCCCceeeEeeccccceEEEE
Q psy10566 453 ----HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVSTQ-----GVHLWDLRDRILLRKFQGVTQGQFTIH 521 (604)
Q Consensus 453 ----g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg-----~I~lwd~~~~~~~~~~~~~~~~~~~i~ 521 (604)
..+.+||..+.+-..... ....-.+++. -+++.++.|+.++ .+.+||+.+.+-... ...........
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~ 238 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF-EAFPQERSSLS 238 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE-CCCSSCCBSCE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEEC-CCCCCccccee
Confidence 468999988754322211 1111112222 2667777777654 488999887643221 11111111111
Q ss_pred eeeCCCCCcEEEEEeCCC--------------cEEEEeCCCCc
Q psy10566 522 SCFGGANQDFVASGSEDG--------------KVYIWHVKREL 550 (604)
Q Consensus 522 ~~~~~~~~~~l~sgs~dg--------------~I~iwd~~~~~ 550 (604)
++. .++++++.|+.++ .|.+||..+.+
T Consensus 239 ~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 239 LVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 112 3567777777532 37788887654
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.95 E-value=0.072 Score=51.27 Aligned_cols=226 Identities=12% Similarity=0.079 Sum_probs=114.1
Q ss_pred CeEEEEeCCC--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCCeeeeeece
Q psy10566 360 SHLLVVGPED--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG-----QFYQCDIEGQVLDSWEGV 432 (604)
Q Consensus 360 ~~l~s~~~d~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~ 432 (604)
..++.||.+. ...+..||..+......-.......-.+++ .-++..++.|+.++ .+..||............
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 3445554322 125889999887644332211111111222 23677778887653 578888866554444321
Q ss_pred ---eEEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-------Ce
Q psy10566 433 ---RVNCLWCRSDGKSVLAADTHH-----RIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-------QG 495 (604)
Q Consensus 433 ---~v~~l~~s~~g~~l~~~~~dg-----~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-------g~ 495 (604)
+....+..-+++.++.|+.++ .+.+||..+..-..... ....-.+++. -+++.++.|+.+ ..
T Consensus 96 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 174 (302)
T 2xn4_A 96 RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLST 174 (302)
T ss_dssp SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCC
T ss_pred CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccE
Confidence 111111223567777776553 57888887654322211 1111112222 256666666542 35
Q ss_pred EEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcceEE--eeCCCCCeeEEEEc
Q psy10566 496 VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPIAT--LSGHTRTVSCVAWN 568 (604)
Q Consensus 496 I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~~--l~~h~~~V~~v~~s 568 (604)
+.+||+.+.+-... ...........++. .++.+++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 175 ~~~yd~~~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~- 250 (302)
T 2xn4_A 175 VECYNATTNEWTYI-AEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV- 250 (302)
T ss_dssp EEEEETTTTEEEEE-CCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred EEEEeCCCCcEEEC-CCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE-
Confidence 88999887643221 11111111111111 356777887764 4689999987543221 1111111122222
Q ss_pred CCCCcEEEEEeCCC-----cEEEECCCCCC
Q psy10566 569 PVYHQMIASVSDDC-----TVRIWGPHLNT 593 (604)
Q Consensus 569 p~~~~~l~s~s~Dg-----~I~iW~~~~~~ 593 (604)
+ +.+++.|+.++ .+.+||+.+.+
T Consensus 251 -~-~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 251 -N-GLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp -T-TEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -C-CEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3 67788887654 48888887654
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.91 E-value=0.095 Score=50.81 Aligned_cols=215 Identities=7% Similarity=0.003 Sum_probs=110.3
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-----C------CeEEEEEcCCCeeeeeece---eEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-----R------GQFYQCDIEGQVLDSWEGV---RVNCL 437 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----d------g~i~iwd~~~~~~~~~~~~---~v~~l 437 (604)
.+..||..+++....-...........+...++..++.|+. . ..+..||............ +....
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 59999999987544221111123333344457788888884 1 1267788865544433221 11111
Q ss_pred EEcCCCCEEEEEeCC--------CeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEec-C-----CeEEEEec
Q psy10566 438 WCRSDGKSVLAADTH--------HRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVS-T-----QGVHLWDL 501 (604)
Q Consensus 438 ~~s~~g~~l~~~~~d--------g~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~-d-----g~I~lwd~ 501 (604)
+..-+++.++.|+.+ ..+.+||..+.+-..... ....-.+++. .+++.++.|+. + ..+.+||+
T Consensus 94 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 94 LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeC
Confidence 122256666666632 458899988754222211 1111112222 35667777765 2 45899998
Q ss_pred CCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCC-----cEEEEeCCCCcceEE--eeCCCCCeeEEEEcCCCCcE
Q psy10566 502 RDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDG-----KVYIWHVKRELPIAT--LSGHTRTVSCVAWNPVYHQM 574 (604)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg-----~I~iwd~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~ 574 (604)
.+.+-.. +...........++. .++++++.|+.++ .+.+||..+.+-... +.........+.+ + +.+
T Consensus 173 ~~~~W~~-~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~l 246 (315)
T 4asc_A 173 KKFEWKE-LAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--V-GTL 246 (315)
T ss_dssp TTTEEEE-CCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-TEE
T ss_pred CCCeEEE-CCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--C-CEE
Confidence 8763221 111111111111111 2667788887654 588999887642222 1111122223333 3 577
Q ss_pred EEEEeCCC--------------cEEEECCCCCC
Q psy10566 575 IASVSDDC--------------TVRIWGPHLNT 593 (604)
Q Consensus 575 l~s~s~Dg--------------~I~iW~~~~~~ 593 (604)
++.|+.++ .|.+||+.+.+
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 77777642 36778887653
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.89 E-value=0.31 Score=47.95 Aligned_cols=170 Identities=9% Similarity=0.064 Sum_probs=96.0
Q ss_pred eEEEEEECCC--ceEE-EEecCC----CCCCeEEEEEec--CCC-EEEEE-ec--CCeEEEEEc--CCCee---eeeece
Q psy10566 371 HELWVWNIET--ELLR-VKLNHS----PEDSLTSCSWNR--DGT-KFVCG-GI--RGQFYQCDI--EGQVL---DSWEGV 432 (604)
Q Consensus 371 ~~i~vwd~~~--~~~~-~~~~~~----~~~~v~~~~~~~--~~~-~l~s~-~~--dg~i~iwd~--~~~~~---~~~~~~ 432 (604)
+.|.++|..+ ++.. ..+... .......+.+.+ ++. +|+++ .. +.+|.+|++ .+... ..+.+.
T Consensus 83 G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~ 162 (355)
T 3sre_A 83 GKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK 162 (355)
T ss_dssp CEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT
T ss_pred CeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccC
Confidence 3899999874 2221 122211 123577888776 454 34444 33 457778776 33332 233332
Q ss_pred ---eEEEEEEcCCCCEEEEEeC-----------------CCeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEe-
Q psy10566 433 ---RVNCLWCRSDGKSVLAADT-----------------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNV- 491 (604)
Q Consensus 433 ---~v~~l~~s~~g~~l~~~~~-----------------dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 491 (604)
..+++.+.++|...++... .|.|..+|. .+.......-...+.++|+||++.++++.
T Consensus 163 ~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 163 LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeC
Confidence 5889999999987776541 245555554 23333333345678999999998887765
Q ss_pred cCCeEEEEecCC-Cce--eeEeeccccceEEEEeeeCCC-CCcEEEEEeCC-CcEEEEeC
Q psy10566 492 STQGVHLWDLRD-RIL--LRKFQGVTQGQFTIHSCFGGA-NQDFVASGSED-GKVYIWHV 546 (604)
Q Consensus 492 ~dg~I~lwd~~~-~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~l~sgs~d-g~I~iwd~ 546 (604)
..+.|+.|++.. +.. .+.+.. .. ...-+...+ +|++.+++..+ +.|..|+.
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~~~-~g---~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVLSF-DT---LVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEC-SS---EEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred CCCeEEEEEECCCCcEecCEEEeC-CC---CCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 468899999864 322 122311 11 112233356 58777766544 34444443
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.83 E-value=0.092 Score=50.74 Aligned_cols=229 Identities=11% Similarity=0.019 Sum_probs=115.2
Q ss_pred CCCCeEEEEECC----CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeC----CC---ceEEEEEECC
Q psy10566 311 PDGLKLATGSKD----TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP----ED---CHELWVWNIE 379 (604)
Q Consensus 311 pdg~~lasgs~d----g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~----d~---~~~i~vwd~~ 379 (604)
-++.+++.|+.+ ..+.+||.. +.....+..+......-..+.+ ++..++.||. ++ ...+++||..
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPS--NGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCC--CCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 355666666632 357888876 4455444333322111222222 5666666665 21 1158999998
Q ss_pred CceEEEEecCCC-CCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEe
Q psy10566 380 TELLRVKLNHSP-EDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAAD 450 (604)
Q Consensus 380 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~ 450 (604)
+......-.... ......+. -+++.++.|+.+ ..+..||+........... +....+..-+++.++.|+
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeC
Confidence 876443322111 11122222 267777777654 3578888865544433221 111111112566677766
Q ss_pred CC-----CeEEEEEcCCCccccccc--C-CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccce
Q psy10566 451 TH-----HRIRTYNFEHLTDSNLLQ--E-DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQ 517 (604)
Q Consensus 451 ~d-----g~I~i~d~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~ 517 (604)
.+ ..+.+||..+.+-..... . ......+.+ +++.++.|+.+ ..+.+||+.+.+-.. +.......
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r 253 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF-VAPMKHRR 253 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE-CCCCSSCC
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE-CCCCCCCc
Confidence 54 458899987754322211 1 111222222 66777777654 459999998764322 11111111
Q ss_pred EEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCc
Q psy10566 518 FTIHSCFGGANQDFVASGSED-----GKVYIWHVKREL 550 (604)
Q Consensus 518 ~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~ 550 (604)
....++. .++++++.|+.+ ..+.+||..+.+
T Consensus 254 ~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 254 SALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred cceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1111111 256777777654 357778877643
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.82 E-value=0.081 Score=52.73 Aligned_cols=144 Identities=12% Similarity=0.111 Sum_probs=95.2
Q ss_pred EcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEecc--CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce----
Q psy10566 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG--HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL---- 382 (604)
Q Consensus 309 fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~--h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~---- 382 (604)
.+.+|..++.+ .++.||.-++.+.. ..+ ...+.. .-..|..+..+|+|++|+..+..+ |.|..+..+.
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~-~Yk-~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~---V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDS-LYH-SLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE---IFVMEVPWGYSNVE 101 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCS-SCE-EEECTTTCCCCTTCEEEECTTSSEEEEECSSE---EEEEECCTTCSCCC
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCC-cce-EEecCcccccCceeEEEECCCCCEEEEecCCe---EEEEEecCccccCc
Confidence 34566666665 36788887877332 222 222322 123688899999999999988774 8887776221
Q ss_pred --------EEEEecCC-----CCCCeEEEEEec---CCCEEEEEecCCeEEEEEcCC---Cee------eeeec----ee
Q psy10566 383 --------LRVKLNHS-----PEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIEG---QVL------DSWEG----VR 433 (604)
Q Consensus 383 --------~~~~~~~~-----~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~---~~~------~~~~~----~~ 433 (604)
....+..+ ...+|..+.|+| .+..|++-..|+.|++||+.. +.. ..+.. ..
T Consensus 102 ~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVND 181 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCC
T ss_pred ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccce
Confidence 11122211 356799999999 457899999999999999953 111 11111 36
Q ss_pred EEEEEEcCCCCEEEEEe--CCCeEEEE
Q psy10566 434 VNCLWCRSDGKSVLAAD--THHRIRTY 458 (604)
Q Consensus 434 v~~l~~s~~g~~l~~~~--~dg~I~i~ 458 (604)
+.+++|.+++-.+.+.+ ..|.|+-.
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999999988888855 77887654
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.71 E-value=0.2 Score=57.62 Aligned_cols=229 Identities=15% Similarity=0.154 Sum_probs=135.4
Q ss_pred EEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCC--Ceeeeee
Q psy10566 353 LAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEG--QVLDSWE 430 (604)
Q Consensus 353 l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~ 430 (604)
.-.+|..+.++.-+ .. ++.++|+++...+..+. ...+|.--.|-.+...-++ .+..|+.|++.| .+.+.+.
T Consensus 71 AIMnP~~~iiALra-g~--~lQiFnl~~k~klks~~--~~e~VvfWkWis~~~l~lV--T~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GK--TLQIFNIEMKSKMKAHT--MTDDVTFWKWISLNTVALV--TDNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hccCCCcceEEEec-CC--eEEEeehHHhhhhcccc--cCCCceEEEecCCCeeEEE--cCCeEEEeccCCCCccHHHHh
Confidence 44678877666654 33 79999999987776665 2356777777654443322 246799999964 3333332
Q ss_pred ------ceeEEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCcccccccCCCCeeEEEEC--CC-CCEEEEEec--
Q psy10566 431 ------GVRVNCLWCRSDGKSVLAAD-------THHRIRTYNFEHLTDSNLLQEDHPVMSFTID--AT-DRLALLNVS-- 492 (604)
Q Consensus 431 ------~~~v~~l~~s~~g~~l~~~~-------~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s--~~-~~~l~~~~~-- 492 (604)
+..|.....+++.++++..+ -.|.+.+|..+......+-+|......+.+. +. ...+..+..
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 44788889999999977554 3488999998876655554443333333222 11 122222222
Q ss_pred -CCeEEEEecCCC---cee------eE-eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCC
Q psy10566 493 -TQGVHLWDLRDR---ILL------RK-FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561 (604)
Q Consensus 493 -dg~I~lwd~~~~---~~~------~~-~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~ 561 (604)
.+.++|.++... .+. .. +.......+++.. ..++.-.++..-+.-|.|++||+.+|.++..-+-...+
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~-~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~ 302 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM-QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (1630)
T ss_pred CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEE-EeccccCEEEEEecCceEEEEecccchhhhhccccCCc
Confidence 367888888543 111 00 1111122333432 33456668888889999999999999988766655556
Q ss_pred eeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 562 VSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 562 V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
|...+-+...+. ++.....|.|.--.++
T Consensus 303 iF~~~~~~~~~g-~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 303 IFVTAPHEATAG-IIGVNRKGQVLSVCVE 330 (1630)
T ss_pred eEEeccCCCCCc-eEEEcCCceEEEEEEc
Confidence 655554443233 3333355555444443
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.70 E-value=0.84 Score=50.23 Aligned_cols=230 Identities=9% Similarity=0.110 Sum_probs=129.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCee
Q psy10566 347 TLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVL 426 (604)
Q Consensus 347 ~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 426 (604)
...|.+|.-..+|. +-.++.+| +..||-.+-+............|.++....++ .|.+|+.+| +..||......
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G---L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f 94 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG---LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRY 94 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC---EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEE
T ss_pred cceEEEEEECCCCC-EEEEECCC---ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEE
Confidence 45689998888774 45566777 77787433221111111123458887776665 566666655 77888854433
Q ss_pred eeee---ceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccc-----cCCCCeeEEEECCCCCEEEEEecCCeEEE
Q psy10566 427 DSWE---GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL-----QEDHPVMSFTIDATDRLALLNVSTQGVHL 498 (604)
Q Consensus 427 ~~~~---~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~I~l 498 (604)
.... ...|.++.. .+| .+..++.+ .+..||..+....... .....|.++....++...+ ++. +.+..
T Consensus 95 ~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~ 169 (758)
T 3ott_A 95 EQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCR 169 (758)
T ss_dssp CCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEE
T ss_pred ECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhh
Confidence 2211 123565544 344 46666655 6888888765433221 1235688888888777554 554 45888
Q ss_pred EecCCCceeeEeecccc---ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 499 WDLRDRILLRKFQGVTQ---GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 499 wd~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
||..++.... +..... ....+.+++...++..|..|+. +-+..+|..+++...........|.++...++ +.+.
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lW 246 (758)
T 3ott_A 170 YIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGN-GDLL 246 (758)
T ss_dssp EETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTT-CCEE
T ss_pred CccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCC-CCEE
Confidence 8887664322 211110 1112344444455565555654 45888998776532211112345888888777 4444
Q ss_pred EEEeCCCcEEEECCCCC
Q psy10566 576 ASVSDDCTVRIWGPHLN 592 (604)
Q Consensus 576 ~s~s~Dg~I~iW~~~~~ 592 (604)
+ |+.+ -+.+++..++
T Consensus 247 i-gT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 247 A-GTDN-GLYVYHNDTT 261 (758)
T ss_dssp E-EETT-EEEEECCTTS
T ss_pred E-EeCC-ceeEEecCCC
Confidence 3 4444 4778887654
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.69 E-value=0.088 Score=52.07 Aligned_cols=238 Identities=12% Similarity=0.060 Sum_probs=116.2
Q ss_pred CCCeEEEEECC-CeEEEEEeCCCCceeEeeEEec-cCCCCeeEEEECCCCCeEEEEeC-C---C----ceEEEEEECCCc
Q psy10566 312 DGLKLATGSKD-TTVIIWDVDPVTFTCQHRKTLE-GHTLGVAYLAWSPDSSHLLVVGP-E---D----CHELWVWNIETE 381 (604)
Q Consensus 312 dg~~lasgs~d-g~i~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~spd~~~l~s~~~-d---~----~~~i~vwd~~~~ 381 (604)
++++++.|+.+ ..+.++|....+..+..+..+. .....-.++.+ ++..++.||. + + ...+++||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66666777644 4577888753234555444444 11122222222 5666666665 2 1 125999999987
Q ss_pred eEEEEecCCCCCCeEEEEEecCCCEEEEEecC---------------------------------------CeEEEEEcC
Q psy10566 382 LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR---------------------------------------GQFYQCDIE 422 (604)
Q Consensus 382 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------------------g~i~iwd~~ 422 (604)
+................+...+++.++.|+.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 75443322211112222223577888888765 478889986
Q ss_pred CCeeeeeece---eEE-EEEEcCCCCEEEEEeC------CCeEEEEEc--CCCcccccc--cCC-CCeeEEEECCCCCEE
Q psy10566 423 GQVLDSWEGV---RVN-CLWCRSDGKSVLAADT------HHRIRTYNF--EHLTDSNLL--QED-HPVMSFTIDATDRLA 487 (604)
Q Consensus 423 ~~~~~~~~~~---~v~-~l~~s~~g~~l~~~~~------dg~I~i~d~--~~~~~~~~~--~~~-~~i~~~~~s~~~~~l 487 (604)
.......... +.. ..+..-+++.++.|+. ...+..||+ .+..-.... ... ......+...+++.+
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iy 256 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLI 256 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEE
T ss_pred CCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEE
Confidence 5544433221 111 1122235566666553 345777876 333211111 111 111111223356677
Q ss_pred EEEecC----------------------CeEEEEecCCCcee--eEeeccccceEEEEeeeCCCCCcEEEEEeCCC----
Q psy10566 488 LLNVST----------------------QGVHLWDLRDRILL--RKFQGVTQGQFTIHSCFGGANQDFVASGSEDG---- 539 (604)
Q Consensus 488 ~~~~~d----------------------g~I~lwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg---- 539 (604)
+.|+.+ ..+.+||+.+.+-. ..+......... +. .++++++.|+.++
T Consensus 257 v~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~---~~--~~~~i~v~GG~~~~~~~ 331 (357)
T 2uvk_A 257 FAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS---LP--WNNSLLIIGGETAGGKA 331 (357)
T ss_dssp EECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE---EE--ETTEEEEEEEECGGGCE
T ss_pred EEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee---EE--eCCEEEEEeeeCCCCCE
Confidence 777632 24788998865422 222211111111 11 3677888888653
Q ss_pred --cEEEEeCCCCcceEEee
Q psy10566 540 --KVYIWHVKRELPIATLS 556 (604)
Q Consensus 540 --~I~iwd~~~~~~~~~l~ 556 (604)
.|.++++++++.+....
T Consensus 332 ~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC-
T ss_pred eeeEEEEEEcCcEeEeeec
Confidence 46667888877665543
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.65 E-value=1.1 Score=49.24 Aligned_cols=262 Identities=12% Similarity=0.125 Sum_probs=150.8
Q ss_pred CCcEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEe-ccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC
Q psy10566 301 CDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL-EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379 (604)
Q Consensus 301 ~~~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~ 379 (604)
...|.++.-..+|. |-.|+.+| +..||-. ........ ......|.++.-..++ .|..++.+| +..||..
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~----~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G---l~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGY----STQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG---ILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSS----CEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE---EEEEETT
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCC----ceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC---eEEEeCC
Confidence 46799999888886 44456677 5556633 21111000 1123468888777766 455566665 8899998
Q ss_pred CceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee-------ceeEEEEEEcCCCCEEEEEeCC
Q psy10566 380 TELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE-------GVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 380 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------~~~v~~l~~s~~g~~l~~~~~d 452 (604)
+...... .......|.++.. .++ .+..++.+ -+..+|.....+..+. ...|.++....+|...+ ++.
T Consensus 91 ~~~f~~~-~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~- 164 (758)
T 3ott_A 91 ADRYEQP-ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY- 164 (758)
T ss_dssp TTEECCC-SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-
T ss_pred CCEEECc-ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-
Confidence 8754321 1112234666654 344 56666665 5788888654444441 23578888888887555 444
Q ss_pred CeEEEEEcCCCccccccc------CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCC
Q psy10566 453 HRIRTYNFEHLTDSNLLQ------EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGG 526 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~ 526 (604)
+-+..|+..+........ ....|.++...+++..+.+|+. +.+..+|..+++... +... ....+.++...
T Consensus 165 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l--~~~~i~~i~~d 240 (758)
T 3ott_A 165 NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAF--HNNSIKSLALD 240 (758)
T ss_dssp TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEE--EEEEEEEEEEC
T ss_pred CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCC--CCCeEEEEEEc
Confidence 457788876543222111 1234788888887777777774 468889987764432 2211 11235555555
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCcceEEeeC--------CCCCeeEEEEcCCCCcEEEEEeCCCcEEEEC
Q psy10566 527 ANQDFVASGSEDGKVYIWHVKRELPIATLSG--------HTRTVSCVAWNPVYHQMIASVSDDCTVRIWG 588 (604)
Q Consensus 527 ~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~--------h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~ 588 (604)
.+|.+ ..|+.+ -+.+++..+++.. .+.. ....|.++....+ +.+ ..|+..| +.+..
T Consensus 241 ~~g~l-WigT~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~-g~l-WiGT~~G-l~~~~ 304 (758)
T 3ott_A 241 GNGDL-LAGTDN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQE-HNI-WLGTDYG-ISLSR 304 (758)
T ss_dssp TTCCE-EEEETT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTT-CCE-EEEESSS-EEEEC
T ss_pred CCCCE-EEEeCC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCC-CCE-EEEeCCc-ccccc
Confidence 56654 445554 5888988765432 2211 1245888888876 443 3444556 54443
No 333
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.61 E-value=0.088 Score=50.62 Aligned_cols=187 Identities=9% Similarity=0.004 Sum_probs=100.2
Q ss_pred CCCeEEEEECC-----CeEEEEEeCCCCce---eEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCc---eEEEEEECCC
Q psy10566 312 DGLKLATGSKD-----TTVIIWDVDPVTFT---CQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDC---HELWVWNIET 380 (604)
Q Consensus 312 dg~~lasgs~d-----g~i~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~---~~i~vwd~~~ 380 (604)
++.+++.|+.+ ..+.+||.. +.. ...+..+........++.+ ++..++.+|.++. ..+.+||..+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~--~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYT--ADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETT--CCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECC--CCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCC
Confidence 56777777755 358888877 333 4444333322222222333 5666666665431 2699999988
Q ss_pred ceEEEEecCCCCCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeCC
Q psy10566 381 ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIR-----GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 381 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~d 452 (604)
.+....-.......-.+++ ..+++.++.|+.+ ..+..||+........... +....+...+++.++.|+.+
T Consensus 138 ~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 216 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFD 216 (301)
T ss_dssp TEEEEEEECSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CeEEECCCCCCCcccceEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCC
Confidence 7644332211111111222 2367778888765 3588899866554443321 11111222356677777654
Q ss_pred -----CeEEEEEcCCCccccccc--C-CCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCc
Q psy10566 453 -----HRIRTYNFEHLTDSNLLQ--E-DHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRI 505 (604)
Q Consensus 453 -----g~I~i~d~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~ 505 (604)
..+.+||..+.+-..... . ......+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 468999998764332221 1 111122222 56677777655 357888887653
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.56 E-value=0.34 Score=46.86 Aligned_cols=226 Identities=11% Similarity=0.061 Sum_probs=111.6
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCC----Cc-----eEEEEEECCCceEEE
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE----DC-----HELWVWNIETELLRV 385 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d----~~-----~~i~vwd~~~~~~~~ 385 (604)
+++.|+. .+.+||.. +.+... ..+..........+...++..++.||.. +. ..+.+||..+.+...
T Consensus 18 i~~~GG~--~~~~yd~~--~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPM--ENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEECSS--EEEEEETT--TTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhcccc--ceEEECCC--CCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 3444443 37788877 444443 2232212222233345577777887731 10 128889998876544
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEecC-------CeEEEEEcCCCeeeeeece---eEEEEEEcCCCCEEEEEeC----
Q psy10566 386 KLNHSPEDSLTSCSWNRDGTKFVCGGIR-------GQFYQCDIEGQVLDSWEGV---RVNCLWCRSDGKSVLAADT---- 451 (604)
Q Consensus 386 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~---~v~~l~~s~~g~~l~~~~~---- 451 (604)
.-.......-.+++. -++..++.|+.+ ..+.+||............ +....+...+++.++.|+.
T Consensus 93 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 93 LPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDK 171 (318)
T ss_dssp CSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSS
T ss_pred CCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCC
Confidence 322111111122222 267777777764 2577888865544433221 1111222246666676654
Q ss_pred --CCeEEEEEcCCCccccccc--CCCCeeEEEECCCCCEEEEEecC-----CeEEEEecCCCceeeEeeccccceEEEEe
Q psy10566 452 --HHRIRTYNFEHLTDSNLLQ--EDHPVMSFTIDATDRLALLNVST-----QGVHLWDLRDRILLRKFQGVTQGQFTIHS 522 (604)
Q Consensus 452 --dg~I~i~d~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~d-----g~I~lwd~~~~~~~~~~~~~~~~~~~i~~ 522 (604)
...+.+||..+.+-..... ....-.+++. -+++.++.|+.+ ..+.+||+.+.+-.. +...........+
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~ 249 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV-MTEFPQERSSISL 249 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEE-CCCCSSCCBSCEE
T ss_pred CccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEE-CCCCCCcccceEE
Confidence 2458999988764322211 1111112222 256777777643 347889988764222 1111111111111
Q ss_pred eeCCCCCcEEEEEeCC--------------CcEEEEeCCCCc
Q psy10566 523 CFGGANQDFVASGSED--------------GKVYIWHVKREL 550 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~d--------------g~I~iwd~~~~~ 550 (604)
+. .++++++.|+.+ ..+.+||..+.+
T Consensus 250 ~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 250 VS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 11 356677777654 357788877654
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.55 E-value=0.098 Score=50.55 Aligned_cols=227 Identities=11% Similarity=0.003 Sum_probs=115.3
Q ss_pred CCCeEEEEeCCC--ceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec----C-----CeEEEEEcCCCee
Q psy10566 358 DSSHLLVVGPED--CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI----R-----GQFYQCDIEGQVL 426 (604)
Q Consensus 358 d~~~l~s~~~d~--~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d-----g~i~iwd~~~~~~ 426 (604)
++..++.||..+ ...+.+||..+.+....-.......-.+++ ..++..++.|+. + ..+.+||+.....
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 455666666311 126899999887754432211111111222 236777777776 3 3578888865544
Q ss_pred eeeece---eEEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCccccccc--C-CCCeeEEEECCCCCEEEEEecC--
Q psy10566 427 DSWEGV---RVNCLWCRSDGKSVLAADTH-----HRIRTYNFEHLTDSNLLQ--E-DHPVMSFTIDATDRLALLNVST-- 493 (604)
Q Consensus 427 ~~~~~~---~v~~l~~s~~g~~l~~~~~d-----g~I~i~d~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d-- 493 (604)
...... +....+..-+++.++.|+.+ ..+.+||..+.+-..... . ......+.+ +++.++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGT 180 (308)
T ss_dssp EECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred eECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCC
Confidence 433221 11111112256666666543 458889987754322211 1 111122222 56777777654
Q ss_pred ---CeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcceE--EeeCCCCCee
Q psy10566 494 ---QGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPIA--TLSGHTRTVS 563 (604)
Q Consensus 494 ---g~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~~--~l~~h~~~V~ 563 (604)
..+.+||+.+.+-... ...........++. -++.+++.|+.+ ..+.+||..+.+-.. .+........
T Consensus 181 ~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 181 NRLNSAECYYPERNEWRMI-TAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG 257 (308)
T ss_dssp CBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred CcCceEEEEeCCCCeEeeC-CCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE
Confidence 4588999877643211 11111111111122 256777777764 569999988754221 1111111222
Q ss_pred EEEEcCCCCcEEEEEeCC-----CcEEEECCCCCC
Q psy10566 564 CVAWNPVYHQMIASVSDD-----CTVRIWGPHLNT 593 (604)
Q Consensus 564 ~v~~sp~~~~~l~s~s~D-----g~I~iW~~~~~~ 593 (604)
.+.+ + +.+++.|+.+ ..+.+||+.+.+
T Consensus 258 ~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 258 ITVH--Q-GRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEE--C-CEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 2232 3 6777887754 357788887653
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.39 E-value=0.27 Score=47.55 Aligned_cols=215 Identities=11% Similarity=0.033 Sum_probs=107.6
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec----CC-------eEEEEEcCCCeeeeeece---eEEEE
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI----RG-------QFYQCDIEGQVLDSWEGV---RVNCL 437 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----dg-------~i~iwd~~~~~~~~~~~~---~v~~l 437 (604)
.+..||..+++....-...............++..++.|+. ++ .+..||............ +....
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 48999999887544221111122233334457788888873 12 267788865544433221 11111
Q ss_pred EEcCCCCEEEEEeCC-------CeEEEEEcCCCcccccccCCCC--eeEEEECCCCCEEEEEec------CCeEEEEecC
Q psy10566 438 WCRSDGKSVLAADTH-------HRIRTYNFEHLTDSNLLQEDHP--VMSFTIDATDRLALLNVS------TQGVHLWDLR 502 (604)
Q Consensus 438 ~~s~~g~~l~~~~~d-------g~I~i~d~~~~~~~~~~~~~~~--i~~~~~s~~~~~l~~~~~------dg~I~lwd~~ 502 (604)
+..-+++.++.|+.+ ..+.+||..+.+-........+ -.+++. .+++.++.|+. -..+.+||+.
T Consensus 105 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 112256677777653 3578888877543322111111 112222 36666677654 2358999998
Q ss_pred CCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC-----CcEEEEeCCCCcce--EEeeCCCCCeeEEEEcCCCCcEE
Q psy10566 503 DRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED-----GKVYIWHVKRELPI--ATLSGHTRTVSCVAWNPVYHQMI 575 (604)
Q Consensus 503 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d-----g~I~iwd~~~~~~~--~~l~~h~~~V~~v~~sp~~~~~l 575 (604)
+.+-... ...........++. .++++++.|+.+ ..+.+||..+.+-. ..+.........+.+ + +.++
T Consensus 184 ~~~W~~~-~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~ 257 (318)
T 2woz_A 184 KGDWKDL-APMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--A-GSLY 257 (318)
T ss_dssp TTEEEEE-CCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--T-TEEE
T ss_pred CCEEEEC-CCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--C-CEEE
Confidence 7643221 11111111111111 256777777654 35778998865422 112211122222333 2 5777
Q ss_pred EEEeCC--------------CcEEEECCCCCC
Q psy10566 576 ASVSDD--------------CTVRIWGPHLNT 593 (604)
Q Consensus 576 ~s~s~D--------------g~I~iW~~~~~~ 593 (604)
+.|+.+ ..+.+||+.+.+
T Consensus 258 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 777754 347778887643
No 337
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.29 E-value=0.84 Score=43.79 Aligned_cols=178 Identities=12% Similarity=0.060 Sum_probs=106.4
Q ss_pred EEEcCCCCeEEEEECC--------------CeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEe--CCCc
Q psy10566 307 CKFSPDGLKLATGSKD--------------TTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG--PEDC 370 (604)
Q Consensus 307 v~fspdg~~lasgs~d--------------g~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~--~d~~ 370 (604)
--++++|.+|+.+... ..|+..+++ ...... +.. . .+..|+++++.|+-+. .++.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d--g~~~~~---l~~--~--~~~~~s~~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN--GHGSTV---LDP--D--PCIYASLIGNYIYYLHYDTQTA 128 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT--SCCCEE---EEC--S--CEEEEEEETTEEEEEEESSSSC
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC--CCcceE---eec--C--CccEEEEeCCEEEEEeecCCCC
Confidence 4568889988877543 245555554 222222 221 1 1236788999988876 3443
Q ss_pred eEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCeeeeeeceeEEEEEEcCCCCEEEEE
Q psy10566 371 HELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGI-RGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449 (604)
Q Consensus 371 ~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~v~~l~~s~~g~~l~~~ 449 (604)
..|+..++.......... . . + .+|+++++.|+-.+. ...|...++++...+.+...... ..+.|++.+++..
T Consensus 129 ~~Iy~~~~dGs~~~~lt~-~-~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 129 TSLYRIRIDGEEKKKIKN-H-Y--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp EEEEEEETTSCCCEEEES-S-C--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEE
T ss_pred ceEEEEECCCCCeEEEeC-C-C--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEE
Confidence 578888887554433333 1 1 2 456788888886665 57888888877654444322222 2356889988877
Q ss_pred eCC--CeEEEEEcCCCcccccccCCCCeeEEEECCCCCEEEEEec--CCeEEEEecCCC
Q psy10566 450 DTH--HRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS--TQGVHLWDLRDR 504 (604)
Q Consensus 450 ~~d--g~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~I~lwd~~~~ 504 (604)
... ..|..-++.......+.. ..+ ..++|++..|+.+.. .+.|...++...
T Consensus 202 ~~~~~~~I~~~~ldG~~~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 202 DVNRDNAIVHVNINNPNPVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EGGGTTEEEEECSSSCCCEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EcCCCcEEEEEECCCCCeEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 654 367777776655444432 233 347788888876533 355666666543
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.081 Score=51.66 Aligned_cols=189 Identities=8% Similarity=-0.034 Sum_probs=102.5
Q ss_pred CeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe--c-CCCEEEEE-ecCCeEEEEEcC-CCeeeeeecee-
Q psy10566 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN--R-DGTKFVCG-GIRGQFYQCDIE-GQVLDSWEGVR- 433 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~s~-~~dg~i~iwd~~-~~~~~~~~~~~- 433 (604)
..+++++.|| .|+-+|..+|+..-.+......++....-. + ++..++.. +.||.+..++.. |.....+.-..
T Consensus 11 ~~V~v~t~dG--~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEG--GLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTS--CEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCC--eEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 3677888888 899999999998888764311222221100 1 22333333 589999999974 42221111110
Q ss_pred E--EEEEE-----------cCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCee--------EEEEC-----CCCCEE
Q psy10566 434 V--NCLWC-----------RSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVM--------SFTID-----ATDRLA 487 (604)
Q Consensus 434 v--~~l~~-----------s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~--------~~~~s-----~~~~~l 487 (604)
+ .-+.. ...+..+++++.+|++...|..+++.........+.. |.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 0 00111 0146678999999999999999988776665432211 11111 124567
Q ss_pred EEEecCCeEEEEecCCCceeeEee--ccccceE--EEE-eeeCCCCCcEEEEEeCCCcEEEEeCCCCcceE
Q psy10566 488 LLNVSTQGVHLWDLRDRILLRKFQ--GVTQGQF--TIH-SCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553 (604)
Q Consensus 488 ~~~~~dg~I~lwd~~~~~~~~~~~--~~~~~~~--~i~-~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~ 553 (604)
+.+..+..+.+.+ ++++ +-.+. ....... .+. ....+.++.+ +.++.||.|+-+|..+|+.+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 7777777777777 4553 21111 0000000 000 0001124555 457889999999988888765
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.10 E-value=1.5 Score=44.85 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=61.9
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEE--EEecCC-----CCCCeEEEEEecC---CCEEEEEec-----
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLR--VKLNHS-----PEDSLTSCSWNRD---GTKFVCGGI----- 412 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~--~~~~~~-----~~~~v~~~~~~~~---~~~l~s~~~----- 412 (604)
.....|+|.|+|+.+++-...+ .|++++..++... ..+... .......++|+|+ +..|.++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg--~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATG--KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTC--EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCC--EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3567999999998776644333 6888887655432 222211 2355779999995 555544432
Q ss_pred --------CCeEEEEEcCC---C-----e-eeeee---ceeEEEEEEcCCCCEEEEEeC
Q psy10566 413 --------RGQFYQCDIEG---Q-----V-LDSWE---GVRVNCLWCRSDGKSVLAADT 451 (604)
Q Consensus 413 --------dg~i~iwd~~~---~-----~-~~~~~---~~~v~~l~~s~~g~~l~~~~~ 451 (604)
...|.-++.+. . . +..+. .|....++|.|||...++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 23566665531 1 1 11121 256889999999997777553
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.97 E-value=0.29 Score=44.10 Aligned_cols=147 Identities=10% Similarity=-0.010 Sum_probs=83.8
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCe--------eEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPV--------MSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i--------~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.+.+++|+|+|...++ .+|.++-.+..+............| ..+.|.|+|.+.++ .||.|+-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5679999998885555 7788777776553333322222333 78999999998888 6699988886432
Q ss_pred ceeeE-----eeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc------ceEEee-CCCCCeeEEEEcCCCC
Q psy10566 505 ILLRK-----FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL------PIATLS-GHTRTVSCVAWNPVYH 572 (604)
Q Consensus 505 ~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~------~~~~l~-~h~~~V~~v~~sp~~~ 572 (604)
..-.- ..+.... ..+..+++.|+|.+.+.. |+.++-+...++. ....+- ..-..-.-+.|.|+ +
T Consensus 118 ~~~~Wl~~a~~vg~~gw-~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~-G 193 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGW-SGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV-G 193 (236)
T ss_dssp TTCCHHHHSEEEECSSG-GGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT-S
T ss_pred CCCceeccccEeccCCC-CceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC-C
Confidence 21110 0000000 023567778999877666 8876544333221 111111 22233455779998 6
Q ss_pred cEEEEEeCCCcEEEECCCC
Q psy10566 573 QMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 573 ~~l~s~s~Dg~I~iW~~~~ 591 (604)
.+.+.. +| ++|....
T Consensus 194 ~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 194 TLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp CEEEEE--TT--EEEEESC
T ss_pred cEEEEe--CC--eEEecCC
Confidence 665554 77 4444433
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.97 E-value=0.3 Score=56.08 Aligned_cols=230 Identities=14% Similarity=0.201 Sum_probs=131.6
Q ss_pred EEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEE
Q psy10566 307 CKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVK 386 (604)
Q Consensus 307 v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~ 386 (604)
.-.+|..+.+|.-. ..++.|+|++ +...++.+.- ..+|..=.|-.+. .|+..+.. .|+-|++.......+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~----~k~klks~~~-~e~VvfWkWis~~-~l~lVT~~---aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIE----MKSKMKAHTM-TDDVTFWKWISLN-TVALVTDN---AVYHWSMEGESQPVK 140 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehH----Hhhhhccccc-CCCceEEEecCCC-eeEEEcCC---eEEEeccCCCCccHH
Confidence 34567777666654 6789999998 3333344332 3467777776544 45555555 499999975332222
Q ss_pred ecCCC----CCCeEEEEEecCCCEEEEEe-------cCCeEEEEEcCCCeeeeeeceeEEEEEEc----CCCCEEEE-Ee
Q psy10566 387 LNHSP----EDSLTSCSWNRDGTKFVCGG-------IRGQFYQCDIEGQVLDSWEGVRVNCLWCR----SDGKSVLA-AD 450 (604)
Q Consensus 387 ~~~~~----~~~v~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~v~~l~~s----~~g~~l~~-~~ 450 (604)
+...| ...|..-..+++.++++..| ..|.+.+|..+.+..+.+.||...-..+. +....+++ +.
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 21112 34577777788888887654 34788999998777666666622111111 11122222 21
Q ss_pred C---CCeEEEEEcCCC-ccccc---------ccC---CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccc
Q psy10566 451 T---HHRIRTYNFEHL-TDSNL---------LQE---DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514 (604)
Q Consensus 451 ~---dg~I~i~d~~~~-~~~~~---------~~~---~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~ 514 (604)
. .+++++.++... ..... +.. ..-..++.+++....+..-+.-|.|++||+.++.++..-.-..
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~ 300 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccC
Confidence 1 368999988653 11000 111 2223467778888889999999999999999998875444333
Q ss_pred cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC
Q psy10566 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE 549 (604)
Q Consensus 515 ~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~ 549 (604)
..++.. +...+.+. +++....|.|.--.+...
T Consensus 301 ~~iF~~--~~~~~~~g-~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 301 ETIFVT--APHEATAG-IIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred CceEEe--ccCCCCCc-eEEEcCCceEEEEEEccc
Confidence 322221 22222333 333335565555554443
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.86 E-value=1.5 Score=45.27 Aligned_cols=189 Identities=6% Similarity=0.038 Sum_probs=110.8
Q ss_pred CCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEe--cCCCEEEEEecC-------CeE---------EEE
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN--RDGTKFVCGGIR-------GQF---------YQC 419 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d-------g~i---------~iw 419 (604)
||++|+.-...+ .+|-..++..-++...+.......+.++.|- |+..++++++.. |.. .+|
T Consensus 141 DGrylfiNdkan-~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f 219 (638)
T 3sbq_A 141 DGKYLFINDKAN-SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMY 219 (638)
T ss_dssp EEEEEEEEETTT-TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred eeEEEEEecCCC-cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEE
Confidence 678888877665 4788889988887766666667789999987 688888888742 221 111
Q ss_pred Ec-CCCee-eeee---ceeEEEEEEcCCCCEEEEEeCC---------------CeEEEEEc-------------------
Q psy10566 420 DI-EGQVL-DSWE---GVRVNCLWCRSDGKSVLAADTH---------------HRIRTYNF------------------- 460 (604)
Q Consensus 420 d~-~~~~~-~~~~---~~~v~~l~~s~~g~~l~~~~~d---------------g~I~i~d~------------------- 460 (604)
.. ++... ..|. ..........++|++.++.+.+ ..+.++++
T Consensus 220 ~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 220 NAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 10 11000 0010 1112234456777877776643 13445553
Q ss_pred ------CC----C-cccccccCCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCce-----e----eEee-ccccceE
Q psy10566 461 ------EH----L-TDSNLLQEDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRIL-----L----RKFQ-GVTQGQF 518 (604)
Q Consensus 461 ------~~----~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~~-----~----~~~~-~~~~~~~ 518 (604)
+. . .....+........+.++|||+++++++. +.++.++|++.... + .... ...-+..
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 22 0 11112222345567889999999988776 77899999875211 0 0111 1111222
Q ss_pred EEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 519 ~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.+... +.++|+...+-.-|..|.-|++..
T Consensus 380 PlHt~-Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 380 PLHTT-FDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEEEE-ECSSSEEEEEETTTTEEEEEEHHH
T ss_pred ccEEE-ECCCCceEeeeeecceEEEEeccH
Confidence 34433 457886666666899999999974
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.82 E-value=0.17 Score=50.04 Aligned_cols=227 Identities=11% Similarity=0.073 Sum_probs=110.0
Q ss_pred CCCeEEEEeCCCceEEEEEECCC--ceEEEEecCCCCCCe-EEEEEecCCCEEEEEec-C---------CeEEEEEcCCC
Q psy10566 358 DSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSL-TSCSWNRDGTKFVCGGI-R---------GQFYQCDIEGQ 424 (604)
Q Consensus 358 d~~~l~s~~~d~~~~i~vwd~~~--~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~~~-d---------g~i~iwd~~~~ 424 (604)
++..++.+|.++ ..+++||..+ .+....-........ .+++ .-++..++.|+. + ..+.+||+...
T Consensus 19 ~~~iyv~GG~~~-~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAG-TAWYKLDTQAKDKKWTALAAFPGGPRDQATSA-FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGT-TCEEEEETTSSSCCEEECCCCTTCCCBSCEEE-EETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCC-CeEEEEccccCCCCeeECCCCCCCcCccceEE-EECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 566666666654 3799999874 333222111101111 1222 226777777776 2 36888888655
Q ss_pred eeeeeec----eeEEEEEEcCCCCEEEEEeCC---------------------------------------CeEEEEEcC
Q psy10566 425 VLDSWEG----VRVNCLWCRSDGKSVLAADTH---------------------------------------HRIRTYNFE 461 (604)
Q Consensus 425 ~~~~~~~----~~v~~l~~s~~g~~l~~~~~d---------------------------------------g~I~i~d~~ 461 (604)
....... .+....++..+++.++.|+.+ ..+.+||..
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 4433322 111121222567777888754 578999988
Q ss_pred CCcccccccC--CCCe-eEEEECCCCCEEEEEec------CCeEEEEec--CCCce--eeEeeccccceEEEEeeeCCCC
Q psy10566 462 HLTDSNLLQE--DHPV-MSFTIDATDRLALLNVS------TQGVHLWDL--RDRIL--LRKFQGVTQGQFTIHSCFGGAN 528 (604)
Q Consensus 462 ~~~~~~~~~~--~~~i-~~~~~s~~~~~l~~~~~------dg~I~lwd~--~~~~~--~~~~~~~~~~~~~i~~~~~~~~ 528 (604)
+.+-...-.. .... .+++.. +++.++.|+. ...+.+||+ .+..- +..+...... ....++. .+
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~~~~~~--~~ 252 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AGGFAGI--SN 252 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BSCEEEE--ET
T ss_pred CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-ccceEEE--EC
Confidence 7543322111 1111 223322 5666666653 345777876 33321 1111111110 0101111 35
Q ss_pred CcEEEEEeCC----------------------CcEEEEeCCCCc--ceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCC--
Q psy10566 529 QDFVASGSED----------------------GKVYIWHVKREL--PIATLSGHTRTVSCVAWNPVYHQMIASVSDDC-- 582 (604)
Q Consensus 529 ~~~l~sgs~d----------------------g~I~iwd~~~~~--~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg-- 582 (604)
+++++.|+.+ ..+.+||..+.+ .+..+......-.++.+ + +.+++.||.++
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~ 329 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW--N-NSLLIIGGETAGG 329 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE--T-TEEEEEEEECGGG
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe--C-CEEEEEeeeCCCC
Confidence 6777777632 257889987643 33333332222233333 3 67888888653
Q ss_pred ----cEEEECCCCCC
Q psy10566 583 ----TVRIWGPHLNT 593 (604)
Q Consensus 583 ----~I~iW~~~~~~ 593 (604)
.|.+.++++++
T Consensus 330 ~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 330 KAVTDSVLITVKDNK 344 (357)
T ss_dssp CEEEEEEEEEC-CCS
T ss_pred CEeeeEEEEEEcCcE
Confidence 34555777665
No 344
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.70 E-value=1 Score=44.87 Aligned_cols=133 Identities=10% Similarity=0.094 Sum_probs=80.3
Q ss_pred CeEEEEEcCCCcccccccC-----CCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc------------eeeEeecccc
Q psy10566 453 HRIRTYNFEHLTDSNLLQE-----DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI------------LLRKFQGVTQ 515 (604)
Q Consensus 453 g~I~i~d~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~------------~~~~~~~~~~ 515 (604)
+.||.-++......+.+.. -..+..+..+|+|+++++.+. ..|.|..+..+. ..+.+.-...
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 5666666654332222222 226788999999999998855 468888887321 1122332111
Q ss_pred c---eEEEEeeeCCC---CCcEEEEEeCCCcEEEEeCCCC--cceEEee---------CCCCCeeEEEEcCCCCcEEEEE
Q psy10566 516 G---QFTIHSCFGGA---NQDFVASGSEDGKVYIWHVKRE--LPIATLS---------GHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 516 ~---~~~i~~~~~~~---~~~~l~sgs~dg~I~iwd~~~~--~~~~~l~---------~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
. ...|..+.|+| ++..|++-..|+.|++||+... ++. .+. .....|.+++|.++ +-.|...
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~-~lTLYvl 197 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKD-GLTLYCL 197 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTT-SSCEEEE
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCC-CcEEEEE
Confidence 0 11233344444 4668999999999999999852 222 332 22357889999986 5555554
Q ss_pred --eCCCcEEEEC
Q psy10566 579 --SDDCTVRIWG 588 (604)
Q Consensus 579 --s~Dg~I~iW~ 588 (604)
+.+|.|+-.-
T Consensus 198 ~~t~~GDIYAlc 209 (452)
T 3pbp_A 198 NTTEGGDIFAFY 209 (452)
T ss_dssp ECTTSCEEEEES
T ss_pred ecCCCCCEEEEC
Confidence 4778776543
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.63 E-value=0.77 Score=44.91 Aligned_cols=229 Identities=12% Similarity=0.013 Sum_probs=122.6
Q ss_pred eccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEE--Eec---CCCCCCeEEEEEecC---CCEEEEE---e
Q psy10566 343 LEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV--KLN---HSPEDSLTSCSWNRD---GTKFVCG---G 411 (604)
Q Consensus 343 l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~s~---~ 411 (604)
+...-.....|+|.|||..+++--..+ .|++++..++.... .+. .........++|+|+ +..|.+. .
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G--~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEA--TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTC--EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCC--EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 333345678999999998766654355 89999876665322 121 123456889999995 3444432 2
Q ss_pred cCCeEEEEEcCC------C---e---eeee---eceeEEEEEEcCCCCEEEEEeC-------------CCeEEEEEcCCC
Q psy10566 412 IRGQFYQCDIEG------Q---V---LDSW---EGVRVNCLWCRSDGKSVLAADT-------------HHRIRTYNFEHL 463 (604)
Q Consensus 412 ~dg~i~iwd~~~------~---~---~~~~---~~~~v~~l~~s~~g~~l~~~~~-------------dg~I~i~d~~~~ 463 (604)
.++.|.-|..++ . . +..+ ..|....+.|.|||...++.+. .|.|.-++....
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 345666666643 1 1 1112 1245667999999987776542 356666665432
Q ss_pred c-------cccccc-CCCCeeEEEECCCCCEEEEEec-CCeEEEEecCCCc------------------eeeEeeccccc
Q psy10566 464 T-------DSNLLQ-EDHPVMSFTIDATDRLALLNVS-TQGVHLWDLRDRI------------------LLRKFQGVTQG 516 (604)
Q Consensus 464 ~-------~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-dg~I~lwd~~~~~------------------~~~~~~~~~~~ 516 (604)
. ...++. .......++|+|++.+.++-.. ++.=.|--+..+. ++..+..+...
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 1 011121 1234567899998775554322 2212222222221 11111111111
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCc----ceEEeeCCCCCeeEEEEcCCCCcEEEEE
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL----PIATLSGHTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~----~~~~l~~h~~~V~~v~~sp~~~~~l~s~ 578 (604)
..-+.+. +|.+++..-..+.|....+..+. ....+.+..+.+.+|+..|| +.++++.
T Consensus 265 --p~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD-G~lyv~t 325 (347)
T 3das_A 265 --PSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG-DKLWLVT 325 (347)
T ss_dssp --EEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET-TEEEEEE
T ss_pred --CcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC-CcEEEEE
Confidence 1111222 45666665556677666665443 22334455578999999999 5555543
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.48 E-value=0.7 Score=41.63 Aligned_cols=102 Identities=9% Similarity=0.086 Sum_probs=66.0
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeee--ceeE--------EEEEEcCCCCEEEEEeCCCeEEEEEcCC
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWE--GVRV--------NCLWCRSDGKSVLAADTHHRIRTYNFEH 462 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~v--------~~l~~s~~g~~l~~~~~dg~I~i~d~~~ 462 (604)
..+..++|+|+|...++ .+|.++-.+.....-..|- ...| .++.|.++|...++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36789999999987666 7787766665221111111 1233 68899999997777 569998887544
Q ss_pred CcccccccC--------CCCeeEEEECCCCCEEEEEecCCeEEEEe
Q psy10566 463 LTDSNLLQE--------DHPVMSFTIDATDRLALLNVSTQGVHLWD 500 (604)
Q Consensus 463 ~~~~~~~~~--------~~~i~~~~~s~~~~~l~~~~~dg~I~lwd 500 (604)
......+.. =..+..+.+.|+|.+.++. |+.++-..
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 222221111 1467899999999988777 77755443
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.09 E-value=1.1 Score=48.65 Aligned_cols=194 Identities=10% Similarity=0.136 Sum_probs=107.0
Q ss_pred CCCCeEEEEECC----CeEEEEEeCCCCceeEeeE-E-----eccCCCCeeEEEECCCCCeEEEEeCCCc----eEEEEE
Q psy10566 311 PDGLKLATGSKD----TTVIIWDVDPVTFTCQHRK-T-----LEGHTLGVAYLAWSPDSSHLLVVGPEDC----HELWVW 376 (604)
Q Consensus 311 pdg~~lasgs~d----g~i~iwd~~~~~~~~~~~~-~-----l~~h~~~V~~l~~spd~~~l~s~~~d~~----~~i~vw 376 (604)
.++..++.||.+ ..+.+||.. +.++..+. . +......-.++.+..++..++.||.++. ..+++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~--~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIH--YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEEC--SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECC--CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 566777778754 357888887 44454444 2 1111112223333326777777775431 268999
Q ss_pred ECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC--eEEEEEcCCCeeeeeec------e--eEEEEEEcCC-CCE
Q psy10566 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG--QFYQCDIEGQVLDSWEG------V--RVNCLWCRSD-GKS 445 (604)
Q Consensus 377 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~------~--~v~~l~~s~~-g~~ 445 (604)
|..+......-.......-.+++...+++.++.|+.++ .+.+||........... . ...++.+..+ ++.
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 99987654432211111122333334888888888765 68999987655444332 1 1222444444 667
Q ss_pred EEEEeC--C-----CeEEEEEcCCCcc------ccccc---CCCCeeEEEECCCCCEEEEEec--------CCeEEEEec
Q psy10566 446 VLAADT--H-----HRIRTYNFEHLTD------SNLLQ---EDHPVMSFTIDATDRLALLNVS--------TQGVHLWDL 501 (604)
Q Consensus 446 l~~~~~--d-----g~I~i~d~~~~~~------~~~~~---~~~~i~~~~~s~~~~~l~~~~~--------dg~I~lwd~ 501 (604)
++.|+. + ..+.+||+.+..- ..... ....-.+++...+++.++.|+. ...+.+||+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 777765 2 4689999887661 11111 1111122333333677777764 345889998
Q ss_pred CCCce
Q psy10566 502 RDRIL 506 (604)
Q Consensus 502 ~~~~~ 506 (604)
.+.+-
T Consensus 634 ~t~~W 638 (695)
T 2zwa_A 634 LSETL 638 (695)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87643
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.48 E-value=0.28 Score=47.80 Aligned_cols=185 Identities=11% Similarity=0.100 Sum_probs=96.6
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEE--CCCCCeEEEE--eCCCceEEEEEECCCceEEEEecC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAW--SPDSSHLLVV--GPEDCHELWVWNIETELLRVKLNH 389 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~--spd~~~l~s~--~~d~~~~i~vwd~~~~~~~~~~~~ 389 (604)
+++.++.||.|.-.|.. +++..-.+... ..++....- .+.+..++.+ +.|| .+..++..+|.....+..
T Consensus 12 ~V~v~t~dG~l~Ald~~----tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG--~l~a~~~~~G~~~~~~~~ 85 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRR----NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDG--NIYYFNAHQGLQKLPLSI 85 (339)
T ss_dssp EEEEEETTSCEEEEETT----TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTT--EEEEEETTTEEEEEEEEH
T ss_pred EEEEEeCCCeEEEEECC----CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCC--EEEEEECCCCcEEeeecc
Confidence 57778888888888877 33334444322 112221110 1122234444 4676 899999988865543331
Q ss_pred C---CCCCeEE---EEE-e----cCCCEEEEEecCCeEEEEEc-CCCeeeeeeceeE---------EEEEEc-----CCC
Q psy10566 390 S---PEDSLTS---CSW-N----RDGTKFVCGGIRGQFYQCDI-EGQVLDSWEGVRV---------NCLWCR-----SDG 443 (604)
Q Consensus 390 ~---~~~~v~~---~~~-~----~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~v---------~~l~~s-----~~g 443 (604)
. ...++.. ... . ..+..+++|+.+|.+...|+ +|+.+..+..... .|.... ..+
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~ 165 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE 165 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC
Confidence 1 1111211 000 0 14568899999999999998 6888877754311 011110 124
Q ss_pred CEEEEEeCCCeEEEEEcCCCcccccccC----CCCee-----EEEECCCCCEEEEEecCCeEEEEecCCCceee
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDSNLLQE----DHPVM-----SFTIDATDRLALLNVSTQGVHLWDLRDRILLR 508 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~~~~~~----~~~i~-----~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~ 508 (604)
..++.+..+..+.+.+ ++++ ...... ...+. +...+.++.+ ++++.||.|.-+|..+|..+-
T Consensus 166 ~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 166 NMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred CeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 5677777766666665 3332 111100 00000 0001224555 557889999999998887653
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.46 E-value=1.5 Score=47.65 Aligned_cols=194 Identities=9% Similarity=0.106 Sum_probs=105.4
Q ss_pred CCCCeEEEEeCCC--ceEEEEEECCCceEEEEe-c-----CCCCCCeEEEEEec-CCCEEEEEecCC------eEEEEEc
Q psy10566 357 PDSSHLLVVGPED--CHELWVWNIETELLRVKL-N-----HSPEDSLTSCSWNR-DGTKFVCGGIRG------QFYQCDI 421 (604)
Q Consensus 357 pd~~~l~s~~~d~--~~~i~vwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~l~s~~~dg------~i~iwd~ 421 (604)
-++..++.||.++ ...+++||..++...... . ......-.+++..+ +++.++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4556666666431 125899999887654433 1 11111123334443 777888887543 5778888
Q ss_pred CCCeeeeeece---eE-EEEEEcCCCCEEEEEeCCC--eEEEEEcCCCccccccc------CCCCeeEEEECCC-CCEEE
Q psy10566 422 EGQVLDSWEGV---RV-NCLWCRSDGKSVLAADTHH--RIRTYNFEHLTDSNLLQ------EDHPVMSFTIDAT-DRLAL 488 (604)
Q Consensus 422 ~~~~~~~~~~~---~v-~~l~~s~~g~~l~~~~~dg--~I~i~d~~~~~~~~~~~------~~~~i~~~~~s~~-~~~l~ 488 (604)
........... +. .+.+...+++.++.|+.++ .+.+||..+..-..... .......+.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 66544433221 11 2233334788888887655 68999988754322211 1222233555555 66777
Q ss_pred EEec--C-----CeEEEEecCCCce-----eeEeecc-ccceEEEEeeeCCCCCcEEEEEeCC--------CcEEEEeCC
Q psy10566 489 LNVS--T-----QGVHLWDLRDRIL-----LRKFQGV-TQGQFTIHSCFGGANQDFVASGSED--------GKVYIWHVK 547 (604)
Q Consensus 489 ~~~~--d-----g~I~lwd~~~~~~-----~~~~~~~-~~~~~~i~~~~~~~~~~~l~sgs~d--------g~I~iwd~~ 547 (604)
.|+. + +.+.+||+.+..- ...+... ........++.. .++.+++.|+.+ ..|.+||..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 7765 2 4589999988761 2222111 111111111221 236777777743 469999998
Q ss_pred CCcc
Q psy10566 548 RELP 551 (604)
Q Consensus 548 ~~~~ 551 (604)
+.+-
T Consensus 635 t~~W 638 (695)
T 2zwa_A 635 SETL 638 (695)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7643
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.65 E-value=7.5 Score=40.16 Aligned_cols=220 Identities=15% Similarity=0.117 Sum_probs=129.0
Q ss_pred CCCeEEEEE-CCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEEC--CCCCeEEEEeCCC-------c----------e
Q psy10566 312 DGLKLATGS-KDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS--PDSSHLLVVGPED-------C----------H 371 (604)
Q Consensus 312 dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--pd~~~l~s~~~d~-------~----------~ 371 (604)
||++|+.-. .+..|-.-+++ ..++..+..+. ....+..++|- |+..|+++.+... . +
T Consensus 141 DGrylfiNdkan~RvAri~l~--~~~~d~Ii~iP-n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~ 217 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLD--IMKCDKMITVP-NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYT 217 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETT--TTEEEEEEECT-TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEE
T ss_pred eeEEEEEecCCCcceEEEECC--cEeeceeEeCC-CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhce
Confidence 678887765 34567777777 44555555555 45678999996 7888998887632 0 0
Q ss_pred EEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCC---------------eEEEEEcC--------CC----
Q psy10566 372 ELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG---------------QFYQCDIE--------GQ---- 424 (604)
Q Consensus 372 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg---------------~i~iwd~~--------~~---- 424 (604)
.....|.++.+....+.. .+....+...+++++.++.+.+. .+.++++. |+
T Consensus 218 ~f~~iD~~tm~v~~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~ 295 (638)
T 3sbq_A 218 MYNAIDAETMEMAFQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITL 295 (638)
T ss_dssp EEEEEETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCC
T ss_pred EEEEEcCCccEEEEEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEE
Confidence 111123333332222221 12344456677888888776432 35555541 11
Q ss_pred ---eeeeeec-----------------eeEEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCcc-------------ccccc
Q psy10566 425 ---VLDSWEG-----------------VRVNCLWCRSDGKSVLAADT-HHRIRTYNFEHLTD-------------SNLLQ 470 (604)
Q Consensus 425 ---~~~~~~~-----------------~~v~~l~~s~~g~~l~~~~~-dg~I~i~d~~~~~~-------------~~~~~ 470 (604)
-+..+.+ .....+.++|||+++++++. +.++.++|++.... .....
T Consensus 296 ~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e 375 (638)
T 3sbq_A 296 GDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE 375 (638)
T ss_dssp TTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB
T ss_pred CCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc
Confidence 0111111 12446788999999888765 67899999985211 11122
Q ss_pred CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC----------ceeeEeeccccceEEEEee--eCCCCCcEEEEEe
Q psy10566 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR----------ILLRKFQGVTQGQFTIHSC--FGGANQDFVASGS 536 (604)
Q Consensus 471 ~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~----------~~~~~~~~~~~~~~~i~~~--~~~~~~~~l~sgs 536 (604)
..-.....+|+++|....+-.-|..|.-|++... ..+.++.-|-+......+. .-.++|++|++..
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 3556778999999965666668999999999753 3445555444322221111 2247888888875
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.98 E-value=8.9 Score=39.06 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=63.5
Q ss_pred CcEEEEEEcCCCC-eEEEEECCCeEEEEEeCCCCceeEeeEEec---------cCCCCeeEEEECCC----CCeEEEEeC
Q psy10566 302 DEVWFCKFSPDGL-KLATGSKDTTVIIWDVDPVTFTCQHRKTLE---------GHTLGVAYLAWSPD----SSHLLVVGP 367 (604)
Q Consensus 302 ~~V~~v~fspdg~-~lasgs~dg~i~iwd~~~~~~~~~~~~~l~---------~h~~~V~~l~~spd----~~~l~s~~~ 367 (604)
..-+.|+|.|||. .|+.+...|.|++++.+.. .....+..+. ........|+|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~-~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGE-IFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSC-BCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCC-eeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 5678999999996 4555678899999974311 1111122221 11457889999996 444444332
Q ss_pred CC----------ceEEEEEECCC----------ceEEEEec-CCCCCCeEEEEEecCCCEEEEEecC
Q psy10566 368 ED----------CHELWVWNIET----------ELLRVKLN-HSPEDSLTSCSWNRDGTKFVCGGIR 413 (604)
Q Consensus 368 d~----------~~~i~vwd~~~----------~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d 413 (604)
.. ...|.-|.+.. .+.+..+. .........++|.|||.+.++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 01455565532 12333332 1222346789999999887776643
No 352
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=92.31 E-value=8.4 Score=37.10 Aligned_cols=190 Identities=8% Similarity=0.023 Sum_probs=106.2
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE---CCC------c
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN---IET------E 381 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd---~~~------~ 381 (604)
|+..++++.+.+|.|+--.+............+... +.+..+........++..+..| .++-+. +.. |
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~G--r~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKG--NYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTS--EEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCC--EEEEEEHHHCcCCCCCCCC
Confidence 566778889999999876654100000001122322 3344444444555666667776 444443 322 2
Q ss_pred eEEEE-ecCCCCCCeEEEEEecC---CCEEEEEecCCeEEEEEcC-------CCeee--ee-eceeEEEEEEcCCCCEEE
Q psy10566 382 LLRVK-LNHSPEDSLTSCSWNRD---GTKFVCGGIRGQFYQCDIE-------GQVLD--SW-EGVRVNCLWCRSDGKSVL 447 (604)
Q Consensus 382 ~~~~~-~~~~~~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~~-------~~~~~--~~-~~~~v~~l~~s~~g~~l~ 447 (604)
..+.. +.......|.++...++ +.+++.++.+|.++-..++ ++-+. .+ .+..+..+........++
T Consensus 80 ~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 80 QHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred cChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEE
Confidence 21111 11123345665543332 6689999999999998773 11111 11 223455555555666788
Q ss_pred EEeCCCeEEEEEcCCCcccc---------cccCCCCeeEEEECCCCC-EEEEEecCCeEEEEecCC
Q psy10566 448 AADTHHRIRTYNFEHLTDSN---------LLQEDHPVMSFTIDATDR-LALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 448 ~~~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~~~~s~~~~-~l~~~~~dg~I~lwd~~~ 503 (604)
..+.+|.+..+....-.... .+.....|.++...+++. .+++.+..|..+..++..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 99999999888875432111 122345566665544455 788888899888877654
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.91 E-value=11 Score=37.41 Aligned_cols=261 Identities=9% Similarity=0.036 Sum_probs=125.2
Q ss_pred CcEEEEEEcC--CCCeEEEEECCC--eEEEEEeCCCCceeEeeEE---ecc--------CCCCeeEEEECCC--CCeEEE
Q psy10566 302 DEVWFCKFSP--DGLKLATGSKDT--TVIIWDVDPVTFTCQHRKT---LEG--------HTLGVAYLAWSPD--SSHLLV 364 (604)
Q Consensus 302 ~~V~~v~fsp--dg~~lasgs~dg--~i~iwd~~~~~~~~~~~~~---l~~--------h~~~V~~l~~spd--~~~l~s 364 (604)
..|.+|++.| ++.+.|.+ ..| --.||...+...+.+.+.. +.. +...|.++++.|. ...+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 5699999998 55554443 344 1134444433334433221 111 1125778999873 455666
Q ss_pred EeCCCceEEEEEECCCceEEEEecC------------------CCCCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCe
Q psy10566 365 VGPEDCHELWVWNIETELLRVKLNH------------------SPEDSLTSCSWNR-DGTKFVCGGIRGQFYQCDIEGQV 425 (604)
Q Consensus 365 ~~~d~~~~i~vwd~~~~~~~~~~~~------------------~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~ 425 (604)
++..+ -|+..+- .++.-..+.. .....+.++.+.| +...++++..++.|...+-.|+.
T Consensus 134 g~~~g--gl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~t 210 (394)
T 3b7f_A 134 GTSPQ--GLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTD 210 (394)
T ss_dssp EEETT--EEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSS
T ss_pred EecCC--cEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCC
Confidence 55554 3544432 2221111110 1123578899988 34556666655655554434443
Q ss_pred eeeee---------------ceeEEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc--CC---CCeeEEEECCC-
Q psy10566 426 LDSWE---------------GVRVNCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ--ED---HPVMSFTIDAT- 483 (604)
Q Consensus 426 ~~~~~---------------~~~v~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~--~~---~~i~~~~~s~~- 483 (604)
..... +..+.++.+.+. ...++++...+ |...+-....-..+.. .. ..+.++.++|.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcceECCCCCCCCCccceEEEEECCCC
Confidence 33321 134788899886 45666666544 5444422221111111 11 33567888763
Q ss_pred CCEEEEEec-----------CCeEEEEecCC-CceeeEee-ccccc-eE--EE-EeeeCCC-CCcEEEEEeCCCcEEEEe
Q psy10566 484 DRLALLNVS-----------TQGVHLWDLRD-RILLRKFQ-GVTQG-QF--TI-HSCFGGA-NQDFVASGSEDGKVYIWH 545 (604)
Q Consensus 484 ~~~l~~~~~-----------dg~I~lwd~~~-~~~~~~~~-~~~~~-~~--~i-~~~~~~~-~~~~l~sgs~dg~I~iwd 545 (604)
...++++.. ++...+|...+ ++....+. +.... .+ .+ ..+..+| +...|+.++.++.|+.-
T Consensus 290 ~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S- 368 (394)
T 3b7f_A 290 PRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS- 368 (394)
T ss_dssp TTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-
T ss_pred CCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-
Confidence 344555532 23345555544 33333332 11110 00 00 1122223 33456667666666543
Q ss_pred CCCCcceEEeeCCCCCeeEEEEc
Q psy10566 546 VKRELPIATLSGHTRTVSCVAWN 568 (604)
Q Consensus 546 ~~~~~~~~~l~~h~~~V~~v~~s 568 (604)
...|+--..+..+-..+.+|+|.
T Consensus 369 ~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 369 ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SSTTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCCCceEcccCCCCeeEEEEe
Confidence 34455555555555567888775
No 354
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=91.27 E-value=11 Score=36.17 Aligned_cols=190 Identities=8% Similarity=0.023 Sum_probs=109.0
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCCc-----eeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECC---Cce
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVTF-----TCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE---TEL 382 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~~-----~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~---~~~ 382 (604)
++..++++.+.+|.|+--.+..... .+.....+... +.+..+........++..+..| .++-+... ...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G--~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEG--KLYLINAYEIKDSS 82 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTS--EEEEEEGGGSCC--
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCC--eEEEEEHHHCCCCC
Confidence 4566788899999999877652110 11111122322 3344544444555677777777 55555442 211
Q ss_pred EEE-------EecCCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcC--------CCeeeeee-ceeEEEEEEcCCC
Q psy10566 383 LRV-------KLNHSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIE--------GQVLDSWE-GVRVNCLWCRSDG 443 (604)
Q Consensus 383 ~~~-------~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~--------~~~~~~~~-~~~v~~l~~s~~g 443 (604)
... .+.......|.++...+ +..+++..+..|.++...+. |.....+. +..+..+....+.
T Consensus 83 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~ 162 (312)
T 1suu_A 83 RASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKD 162 (312)
T ss_dssp -----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTT
T ss_pred ccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCC
Confidence 000 11112234465554443 46788999999999988773 11111121 2345555555556
Q ss_pred CEEEEEeCCCeEEEEEcCCCccc-------cc--ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDS-------NL--LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~-------~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
..++..+.+|.+..+....-... .. +.....+.++....++..+++.+..|.....++..
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 77999999999999987652211 11 22345666766655667788889999988888754
No 355
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=89.52 E-value=14 Score=34.66 Aligned_cols=194 Identities=9% Similarity=-0.039 Sum_probs=112.2
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEE---EEeCCCCceeEeeEEeccCCCCeeEEEECC-CCCeEEEEeCCCceEEEEEE
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVII---WDVDPVTFTCQHRKTLEGHTLGVAYLAWSP-DSSHLLVVGPEDCHELWVWN 377 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~i---wd~~~~~~~~~~~~~l~~h~~~V~~l~~sp-d~~~l~s~~~d~~~~i~vwd 377 (604)
+.+..+.......+|+.-+..|.++- |++.. .....+ +. ....|..+.... +..+++.++.+| .++...
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~--~~~~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G--~iKr~~ 96 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQ--GSKVSL--KS-REEKIVGAFIREKFGNRLLLATKKG--YVKKIP 96 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHT--SEECCC--SS-TTCCEEEEEEGGGSCSEEEEEETTS--EEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCcc--Cccccc--CC-CCCEEEEEECCcCCCCEEEEEeCCC--EEEEEE
Confidence 45666655555556666677887654 44431 111112 43 345566664421 467899999998 788887
Q ss_pred CCCce----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-----CC-----eeeee-eceeEEEEEEcCC
Q psy10566 378 IETEL----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-----GQ-----VLDSW-EGVRVNCLWCRSD 442 (604)
Q Consensus 378 ~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-----~~-----~~~~~-~~~~v~~l~~s~~ 442 (604)
+..-. -...+.....+.+..+........++..+..|.+..+... ++ ..-.+ .+..+..+...++
T Consensus 97 l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~ 176 (276)
T 3no0_A 97 LAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNG 176 (276)
T ss_dssp GGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESS
T ss_pred HHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCC
Confidence 65421 1112222234566666666667789999999999888762 11 11111 2345666666666
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcccc-------cccCCCCeeEEEECCCCCEEEEEecCCeEEE--EecC
Q psy10566 443 GKSVLAADTHHRIRTYNFEHLTDSN-------LLQEDHPVMSFTIDATDRLALLNVSTQGVHL--WDLR 502 (604)
Q Consensus 443 g~~l~~~~~dg~I~i~d~~~~~~~~-------~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~l--wd~~ 502 (604)
+..++..+..|.++...+....... .+.....+..+.....+..++..+.+|.+.. ++..
T Consensus 177 ~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 177 EPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp CSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 7789999999999998875432211 1122344444433333445556666666655 6543
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.14 E-value=18 Score=35.62 Aligned_cols=181 Identities=8% Similarity=0.016 Sum_probs=89.8
Q ss_pred eEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECC--CCCeEEEEeCCC-ce-EEEEEECCCceEEEEecCC
Q psy10566 315 KLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSP--DSSHLLVVGPED-CH-ELWVWNIETELLRVKLNHS 390 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~sp--d~~~l~s~~~d~-~~-~i~vwd~~~~~~~~~~~~~ 390 (604)
.|..|+..| +.+++......+....... .....|.+|++.| .+... +++..+ .+ .|...+ ..+..-..+...
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~-~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERML-MAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEE-EEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEE-EEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 566676666 5555543211234333211 1245699999998 44444 444332 00 233322 223222222110
Q ss_pred -------------CCCCeEEEEEec-C-CCEEEEEecCCeEEEEEcCCCeeeeee---------------------ceeE
Q psy10566 391 -------------PEDSLTSCSWNR-D-GTKFVCGGIRGQFYQCDIEGQVLDSWE---------------------GVRV 434 (604)
Q Consensus 391 -------------~~~~v~~~~~~~-~-~~~l~s~~~dg~i~iwd~~~~~~~~~~---------------------~~~v 434 (604)
....|.++++.| + ...+.+++..+.|...+-.|+...... ...+
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 112477888887 2 566777776776666544454433321 1257
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEEcCCCccccccc-------------CCCCeeEEEECCC-CCEEEEEecCCeEEEE
Q psy10566 435 NCLWCRSD-GKSVLAADTHHRIRTYNFEHLTDSNLLQ-------------EDHPVMSFTIDAT-DRLALLNVSTQGVHLW 499 (604)
Q Consensus 435 ~~l~~s~~-g~~l~~~~~dg~I~i~d~~~~~~~~~~~-------------~~~~i~~~~~s~~-~~~l~~~~~dg~I~lw 499 (604)
.++.+.|. ...++++..++.|...+-....-..... ....+.++.++|. ...++++...+ |...
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 78999873 4556666555544443322211111100 0134788999986 35666666544 5444
Q ss_pred e
Q psy10566 500 D 500 (604)
Q Consensus 500 d 500 (604)
+
T Consensus 259 ~ 259 (394)
T 3b7f_A 259 D 259 (394)
T ss_dssp E
T ss_pred C
Confidence 3
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.05 E-value=15 Score=34.48 Aligned_cols=220 Identities=15% Similarity=0.103 Sum_probs=111.1
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCee
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVL 426 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~ 426 (604)
.|..|+.... +.+... ++ .|+.|-......+- ........|..++...... ++. . ||.|+.|-.. ++.-
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G--~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GG--KVLGWGANLNGQLT-MPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TT--EEEEEECCSSSTTS-CCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCC--eEEEEE-CC--EEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCC
Confidence 5667766543 233334 66 78888755421110 0111123566666554332 233 4 8999999763 2211
Q ss_pred ee-eeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCC
Q psy10566 427 DS-WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDR 504 (604)
Q Consensus 427 ~~-~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~ 504 (604)
.. .....|..++...+. .++.. +|.|+.|-....-.. ........|..++...+. .++-. +|.|+.|-....
T Consensus 96 ~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp CCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTT
T ss_pred CCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCC
Confidence 10 001256666665443 34445 899999986553221 111223557777665443 33333 799999976542
Q ss_pred ceeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcE
Q psy10566 505 ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584 (604)
Q Consensus 505 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I 584 (604)
..+..-......+..|.+ .. ...++. .||.|+.|-....-.+..-......|..|+.... ..++++ ||.|
T Consensus 170 gqlg~p~~~~~~v~~i~~---G~-~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-h~~al~---~g~v 239 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAG---GI-FHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW-YSLALK---NGKV 239 (282)
T ss_dssp STTSCCGGGGSSEEEEEE---CS-SEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS-CEEEEE---TTEE
T ss_pred CCCCCceecCCCeEEEEe---cC-CEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC-EEEEEE---CCEE
Confidence 221111111122333322 22 223444 5999999976643222111111245778877654 333333 9999
Q ss_pred EEECCCCCC
Q psy10566 585 RIWGPHLNT 593 (604)
Q Consensus 585 ~iW~~~~~~ 593 (604)
..|-.....
T Consensus 240 ~~wG~n~~g 248 (282)
T 3qhy_B 240 IAWGSSRTA 248 (282)
T ss_dssp EEESTTCCC
T ss_pred EEecCCCCc
Confidence 999876543
No 358
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=87.30 E-value=23 Score=34.67 Aligned_cols=192 Identities=10% Similarity=0.016 Sum_probs=109.9
Q ss_pred EcCCCCeEEEEECCCeEEEEEeCC-----CCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEE---ECCC
Q psy10566 309 FSPDGLKLATGSKDTTVIIWDVDP-----VTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVW---NIET 380 (604)
Q Consensus 309 fspdg~~lasgs~dg~i~iwd~~~-----~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vw---d~~~ 380 (604)
+-|+..++++.+.+|.|+--.+.. ..+.+.....++. .+.+..+........++..+..| .++-+ ++..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G--~~~~~~~~eip~ 79 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSG--KVFWLPVHQLPE 79 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTS--EEEEEEGGGSCB
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCC--eEEEEEHHHCcC
Confidence 346778899999999999765431 0111222233443 44555555555556677667776 44444 4322
Q ss_pred ------ceEEEEe-cCCCCCCeEEEEEec---CCCEEEEEecCCeEEEEEcC--------CCeeeee-eceeEEEEEEcC
Q psy10566 381 ------ELLRVKL-NHSPEDSLTSCSWNR---DGTKFVCGGIRGQFYQCDIE--------GQVLDSW-EGVRVNCLWCRS 441 (604)
Q Consensus 381 ------~~~~~~~-~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~--------~~~~~~~-~~~~v~~l~~s~ 441 (604)
|..+..+ .......|.++...+ ++.+++.++..|.++...++ |.....+ .+..+..+....
T Consensus 80 ~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~ 159 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTD 159 (370)
T ss_dssp CCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeC
Confidence 2221111 112345566655432 45689999999999988762 1111111 123444455555
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcccc---------cccCCCCeeEEEECC------------------------------
Q psy10566 442 DGKSVLAADTHHRIRTYNFEHLTDSN---------LLQEDHPVMSFTIDA------------------------------ 482 (604)
Q Consensus 442 ~g~~l~~~~~dg~I~i~d~~~~~~~~---------~~~~~~~i~~~~~s~------------------------------ 482 (604)
....++..+.+|.+..++...-.... .+.....|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~ 239 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVID 239 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC----------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccc
Confidence 66678889999998888865432111 122345566555544
Q ss_pred -----CCCEEEEEecCCeEEEEecCC
Q psy10566 483 -----TDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 483 -----~~~~l~~~~~dg~I~lwd~~~ 503 (604)
++..+++.+..|..+...+..
T Consensus 240 ~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 240 VADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp -------CEEEEEETTSEEEEEEGGG
T ss_pred cccccCCceEEEeeCCCCEEEEEHHH
Confidence 456788999999988887653
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.22 E-value=40 Score=36.33 Aligned_cols=232 Identities=8% Similarity=0.009 Sum_probs=117.6
Q ss_pred ECCCCCeEEEEeCCC---ceEEEEEECCCceEEEEecCC-CCC------CeEEEEEecCCCEEEEEe----------cCC
Q psy10566 355 WSPDSSHLLVVGPED---CHELWVWNIETELLRVKLNHS-PED------SLTSCSWNRDGTKFVCGG----------IRG 414 (604)
Q Consensus 355 ~spd~~~l~s~~~d~---~~~i~vwd~~~~~~~~~~~~~-~~~------~v~~~~~~~~~~~l~s~~----------~dg 414 (604)
++|++++++.+-+.+ -..++++|+.+++.+..-... .+. ....++|..+...+++.. ...
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 789988776653222 248999999999865321110 000 113458874444444321 124
Q ss_pred eEEEEEcCC-----Ceeeeeecee-EEEEEEcCCCCE-----EEEEeCC---CeEEEEEcCC--CcccccccCCCCeeEE
Q psy10566 415 QFYQCDIEG-----QVLDSWEGVR-VNCLWCRSDGKS-----VLAADTH---HRIRTYNFEH--LTDSNLLQEDHPVMSF 478 (604)
Q Consensus 415 ~i~iwd~~~-----~~~~~~~~~~-v~~l~~s~~g~~-----l~~~~~d---g~I~i~d~~~--~~~~~~~~~~~~i~~~ 478 (604)
.|+.|.+-. ..+..-.... ......++++++ +++.+.+ ..+.+.|... .+...+.... .. .+
T Consensus 217 ~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~ 294 (711)
T 4hvt_A 217 SLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS-DA-TL 294 (711)
T ss_dssp EEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT-TC-EE
T ss_pred EEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC-cc-eE
Confidence 688887621 2222211111 234556667662 4443322 3466666553 2211221111 11 12
Q ss_pred EECCCCCEEEEE----------ecCCeEEEEecCCCc-------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCc-
Q psy10566 479 TIDATDRLALLN----------VSTQGVHLWDLRDRI-------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK- 540 (604)
Q Consensus 479 ~~s~~~~~l~~~----------~~dg~I~lwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~- 540 (604)
..+.++.+++.. ...+.|...|+.++. ..+.+-.+... ..+..+.+.. +.++++...++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~-~~l~~~~~~~~~~ 372 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTAN-EVFNFISTTK-DRVFLATYDNVVA 372 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTT-EEEEEEEECS-SCEEEEEEETTEE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCC-CeEEEEEEEC-CEEEEEEEECCEE
Confidence 233455544432 245678889987642 22332222222 2343344433 467777777774
Q ss_pred -EEEEeCCCCc-ceEE-eeCC-CCCeeEEEEcCCCCcEEEEEeCC---CcEEEECCC
Q psy10566 541 -VYIWHVKREL-PIAT-LSGH-TRTVSCVAWNPVYHQMIASVSDD---CTVRIWGPH 590 (604)
Q Consensus 541 -I~iwd~~~~~-~~~~-l~~h-~~~V~~v~~sp~~~~~l~s~s~D---g~I~iW~~~ 590 (604)
|+++|..+++ .... +.-. .+.|..+..+++++.++++.+.. +.+..+++.
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 6777776664 2333 3222 35677777777756677666543 567777775
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.21 E-value=40 Score=36.33 Aligned_cols=235 Identities=11% Similarity=0.066 Sum_probs=114.3
Q ss_pred EEEEE-EcCCCCeEEEE-ECCC----eEEEEEeCCCCceeEeeE-Eec-cCCC------CeeEEEECCCCCeEEEEeCC-
Q psy10566 304 VWFCK-FSPDGLKLATG-SKDT----TVIIWDVDPVTFTCQHRK-TLE-GHTL------GVAYLAWSPDSSHLLVVGPE- 368 (604)
Q Consensus 304 V~~v~-fspdg~~lasg-s~dg----~i~iwd~~~~~~~~~~~~-~l~-~h~~------~V~~l~~spd~~~l~s~~~d- 368 (604)
...+. ++|++++++.+ |..| .++++|+. +.+.+. .+. .-.. ....++|..++ .++.+...
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~----t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~ 205 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLE----KKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLH 205 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETT----TTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCS
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECC----cCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCC
Confidence 34455 89999976654 3333 59999998 222221 111 0000 11344786443 44443211
Q ss_pred -------C-ceEEEEEECCCce--EEEEecCCCCCCeEEEEEecCCCE-----EEEEecC---CeEEEEEcC---CCeee
Q psy10566 369 -------D-CHELWVWNIETEL--LRVKLNHSPEDSLTSCSWNRDGTK-----FVCGGIR---GQFYQCDIE---GQVLD 427 (604)
Q Consensus 369 -------~-~~~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~-----l~s~~~d---g~i~iwd~~---~~~~~ 427 (604)
+ ..+|+.|.+.+.. -...+.......-.+...++++.+ +++.+.+ ..+.+.+.+ +....
T Consensus 206 ~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (711)
T 4hvt_A 206 KNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK 285 (711)
T ss_dssp TTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE
T ss_pred CCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE
Confidence 1 1279999887642 122222222222334555666663 4443322 355666664 33222
Q ss_pred eeeceeEEEEEEcCCCCEEEEE----------eCCCeEEEEEcCCCc-------c-cccccC--CCCeeEEEECCCCCEE
Q psy10566 428 SWEGVRVNCLWCRSDGKSVLAA----------DTHHRIRTYNFEHLT-------D-SNLLQE--DHPVMSFTIDATDRLA 487 (604)
Q Consensus 428 ~~~~~~v~~l~~s~~g~~l~~~----------~~dg~I~i~d~~~~~-------~-~~~~~~--~~~i~~~~~s~~~~~l 487 (604)
...... ..+....++..++.. ...+.|...|+.+.. . ..++.+ ...+..+.+..+ .++
T Consensus 286 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 286 INMPSD-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp CCSCTT-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred eecCCc-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 211111 112233344444422 246779999987642 1 112332 445778888865 566
Q ss_pred EEEecCCe--EEEEecCCCc-eeeE-eeccccceEEEEeeeCCCCC-cEEEEEeC---CCcEEEEeCC
Q psy10566 488 LLNVSTQG--VHLWDLRDRI-LLRK-FQGVTQGQFTIHSCFGGANQ-DFVASGSE---DGKVYIWHVK 547 (604)
Q Consensus 488 ~~~~~dg~--I~lwd~~~~~-~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~sgs~---dg~I~iwd~~ 547 (604)
++...++. +.++|+.++. .... +....... +.....++++ .++++.+. -+.++.+|..
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~--~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNA--IFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTC--EEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeE--EEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66666764 7778876664 2333 22221111 2222223444 45555543 3678888877
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.97 E-value=26 Score=39.33 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=28.4
Q ss_pred eeCCCCCcEEEEEeCCCcEEEEeCCCCcceEEee
Q psy10566 523 CFGGANQDFVASGSEDGKVYIWHVKRELPIATLS 556 (604)
Q Consensus 523 ~~~~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~ 556 (604)
+...++..++++-+.|+++|||++.+++++.+..
T Consensus 241 ~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 241 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 3344677899999999999999999999888753
No 362
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.83 E-value=51 Score=33.39 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=60.1
Q ss_pred CeeEEEECCCCC-eEEEEeCCCceEEEEEECCCce---EEEEecC--------CCCCCeEEEEEecC----CCEEEEEec
Q psy10566 349 GVAYLAWSPDSS-HLLVVGPEDCHELWVWNIETEL---LRVKLNH--------SPEDSLTSCSWNRD----GTKFVCGGI 412 (604)
Q Consensus 349 ~V~~l~~spd~~-~l~s~~~d~~~~i~vwd~~~~~---~~~~~~~--------~~~~~v~~~~~~~~----~~~l~s~~~ 412 (604)
....|+|.||+. .++++...+ .|++++..... .+..+.. ........++|+|+ +...++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G--~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEG--YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTT--EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCc--eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 467899999996 455666776 89999754321 1122211 11356789999996 444444332
Q ss_pred C------------CeEEEEEcCC-----------Ceeeeee----ceeEEEEEEcCCCCEEEEEeCC
Q psy10566 413 R------------GQFYQCDIEG-----------QVLDSWE----GVRVNCLWCRSDGKSVLAADTH 452 (604)
Q Consensus 413 d------------g~i~iwd~~~-----------~~~~~~~----~~~v~~l~~s~~g~~l~~~~~d 452 (604)
+ ..|.-|.++. +.+.... .|....+.|.|||...++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1444455421 1222221 3567889999999887776543
No 363
>2voi_B BH3-interacting domain death agonist P13; protein-protein complex, BCL-2, membrane, apoptosis, Pro-surviVal, mitochondrion, phosphoprotein; 2.1A {Mus musculus}
Probab=79.22 E-value=1.3 Score=26.18 Aligned_cols=19 Identities=32% Similarity=0.581 Sum_probs=16.3
Q ss_pred CCchHHHHHHHHHHHHHhc
Q psy10566 2 TRTDEDIVRLIGQYLRTIG 20 (604)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~ 20 (604)
+.++|+++|.|.-||-.+|
T Consensus 1 se~qe~~i~~ia~~la~ig 19 (34)
T 2voi_B 1 SESQEEIIHNIARHLAQIG 19 (34)
T ss_dssp --CHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHccchh
Confidence 3578999999999999999
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=78.65 E-value=43 Score=31.24 Aligned_cols=236 Identities=16% Similarity=0.081 Sum_probs=116.6
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeCCCCceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETEL 382 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~ 382 (604)
.|..++....- .++. . ||.|..|-......-..+. .....|..++...+.. +... ++ .|+.|-.....
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~----~~~~~i~~ia~G~~hs--~~l~-~G--~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPA----ATQSGVDAIAAGNYHS--LALK-DG--EVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCG----GGGSCCCEEEECSSEE--EEEE-TT--EEEEEECCTTS
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCc----cCCCCEEEEEeCCCEE--EEEE-CC--EEEEeeCCCCC
Confidence 46666655432 2333 4 8999999765221111110 1123567777654432 2223 66 78888765421
Q ss_pred EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCeeee-eeceeEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy10566 383 LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVLDS-WEGVRVNCLWCRSDGKSVLAADTHHRIRTYN 459 (604)
Q Consensus 383 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~-~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d 459 (604)
.+- ........|..++...+ +.+.-. +|.|+.|-.. ++.-.. .....|..++...... ++-. +|.|..|-
T Consensus 93 qlg-~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~--~~l~-~G~v~~wG 165 (282)
T 3qhy_B 93 QTT-VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA--LAVK-NGGVIAWG 165 (282)
T ss_dssp TTC-CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE--EEEE-TTEEEEEE
T ss_pred CCC-CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE--EEEE-CCEEEEec
Confidence 110 01011235777766544 333344 9999999763 332111 1122466666554433 2333 79999997
Q ss_pred cCCCccccc-ccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCceeeEeeccccceEEEEeeeCCCCCcEEEEEeCC
Q psy10566 460 FEHLTDSNL-LQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSED 538 (604)
Q Consensus 460 ~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~d 538 (604)
......... ......|..++...+...+ - .+|.|+.|-......+-.-......+..|.+ .... .++. . |
T Consensus 166 ~n~~gqlg~p~~~~~~v~~i~~G~~hs~a--l-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~---G~~h-~~al-~-~ 236 (282)
T 3qhy_B 166 DNYFGQTTVPAEAQSGVDDVAGGIFHSLA--L-KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS---GEWY-SLAL-K-N 236 (282)
T ss_dssp CCTTSTTSCCGGGGSSEEEEEECSSEEEE--E-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE---CSSC-EEEE-E-T
T ss_pred CCCCCCCCCceecCCCeEEEEecCCEEEE--E-ECCeEEEEECCCCCCCCCCcccCCCceEEEc---CCCE-EEEE-E-C
Confidence 665322111 1123567777765443333 3 5999999976542211110011122223322 2222 3333 3 9
Q ss_pred CcEEEEeCCCCcceEEeeCCCCCeeEEEEcCC
Q psy10566 539 GKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570 (604)
Q Consensus 539 g~I~iwd~~~~~~~~~l~~h~~~V~~v~~sp~ 570 (604)
|.|+.|-.....++.. ...|.+|+--..
T Consensus 237 g~v~~wG~n~~gq~~v----~~~v~~iaaG~~ 264 (282)
T 3qhy_B 237 GKVIAWGSSRTAPSSV----QSGVSSIEAGPN 264 (282)
T ss_dssp TEEEEESTTCCCCGGG----SSCEEEEEECSS
T ss_pred CEEEEecCCCCccccC----CCCcEEEEECcC
Confidence 9999997765433322 235666666554
No 365
>2kbw_B BH3-interacting domain death agonist; MCL-1, BID_BH3, complex, alternative splicing, apoptosis, CY developmental protein, differentiation, membrane; NMR {Homo sapiens}
Probab=78.36 E-value=1.6 Score=25.91 Aligned_cols=19 Identities=37% Similarity=0.672 Sum_probs=17.4
Q ss_pred CCchHHHHHHHHHHHHHhc
Q psy10566 2 TRTDEDIVRLIGQYLRTIG 20 (604)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~ 20 (604)
+.++|+|+|.|..||-.+|
T Consensus 5 se~qe~~i~~ia~qla~ig 23 (35)
T 2kbw_B 5 SESQEDIIRNIARHLAQVG 23 (35)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHccchh
Confidence 4678999999999999999
No 366
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=75.21 E-value=3.6 Score=30.23 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHhCCc
Q psy10566 87 EDIVRLIGQYLRTIGLDRTADLLMQESGCK 116 (604)
Q Consensus 87 ~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~ 116 (604)
.-+.-||-.||+-.||+-|+.+++-|+|..
T Consensus 19 rLi~~LVrEyLef~~l~~TlsVf~pEs~l~ 48 (82)
T 2d68_A 19 RLVASLVAEFLQFFNLDFTLAVFQPETSTL 48 (82)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCcchHHhhhhccCCC
Confidence 447789999999999999999999999986
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=70.65 E-value=74 Score=30.18 Aligned_cols=187 Identities=11% Similarity=0.055 Sum_probs=110.3
Q ss_pred CCCCeEEEEeCCCceEEEEEECCCce-------EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-------
Q psy10566 357 PDSSHLLVVGPEDCHELWVWNIETEL-------LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE------- 422 (604)
Q Consensus 357 pd~~~l~s~~~d~~~~i~vwd~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------- 422 (604)
|+..++++.+.+| .|+--.+..-. -...+.....+.+..+........++..+..|.++-+...
T Consensus 6 ~~e~~~v~~T~~G--~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKENIVVMLTKKG--FLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --CEEEEEEETTC--BEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCCCEEEEEeCCC--EEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 4566788888888 67776654321 1222222234556666666677788888999988877652
Q ss_pred ---CCe----eeeeeceeEEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCccc-------ccccCCCCeeEEEECCCCC
Q psy10566 423 ---GQV----LDSWEGVRVNCLWCRS---DGKSVLAADTHHRIRTYNFEHLTDS-------NLLQEDHPVMSFTIDATDR 485 (604)
Q Consensus 423 ---~~~----~~~~~~~~v~~l~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~-------~~~~~~~~i~~~~~s~~~~ 485 (604)
|.. +.--.+..+..+...+ +...++..+..|.++...+...... ..+.....+..+.....+.
T Consensus 84 ~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 84 ASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred cCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 111 1111233455554433 4678999999999999987553221 1122355666666655567
Q ss_pred EEEEEecCCeEEEEecCCCc-------eeeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCC
Q psy10566 486 LALLNVSTQGVHLWDLRDRI-------LLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVK 547 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~ 547 (604)
.++..+.+|.+..+....-. -++.+.-.. ....+.+... .++..+++.+..|..+..++.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v-~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSV-KENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEEC-TTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEE-CCCCeEEEEECCCceEEEEHH
Confidence 78899999998888875411 111111111 1112332233 345678888999999988875
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=69.64 E-value=80 Score=30.19 Aligned_cols=199 Identities=14% Similarity=0.016 Sum_probs=113.2
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEE---eCCC--CceeEeeE---EeccCCCCeeEE-EECC--CCCeEEEEeCCCc
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWD---VDPV--TFTCQHRK---TLEGHTLGVAYL-AWSP--DSSHLLVVGPEDC 370 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd---~~~~--~~~~~~~~---~l~~h~~~V~~l-~~sp--d~~~l~s~~~d~~ 370 (604)
+.+..+........|+.-+..|.++-.. +... ...+..+. .+.. ...|.++ ...+ +..+++.++..|
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G- 119 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNG- 119 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTS-
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCC-
Confidence 3454444444445555556677655443 3321 11222211 1222 3345544 4442 577899999998
Q ss_pred eEEEEEECCCce-----EEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCee----------eee-ece
Q psy10566 371 HELWVWNIETEL-----LRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQVL----------DSW-EGV 432 (604)
Q Consensus 371 ~~i~vwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~----------~~~-~~~ 432 (604)
.++...+..-. -...+.....+.+..+........++..+..|.+..+... .-.. -.+ .+.
T Consensus 120 -~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d 198 (327)
T 3uc1_A 120 -LVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDD 198 (327)
T ss_dssp -EEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTC
T ss_pred -EEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCC
Confidence 78887765422 1122222234566666666677789999999998887664 2111 011 223
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCccc-------cccc--C-CCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 433 RVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS-------NLLQ--E-DHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~-------~~~~--~-~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
.|..+...+++..++..+..|.++.-.+...... ..+. . ...+..+....+...++..+.+|.+.-++..
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 5777777777778999999999998887543221 1111 1 3345554444455567777777777777654
Q ss_pred C
Q psy10566 503 D 503 (604)
Q Consensus 503 ~ 503 (604)
.
T Consensus 279 ~ 279 (327)
T 3uc1_A 279 Q 279 (327)
T ss_dssp G
T ss_pred h
Confidence 3
No 369
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=68.65 E-value=2.6 Score=21.97 Aligned_cols=11 Identities=45% Similarity=0.890 Sum_probs=9.5
Q ss_pred HHHHHHHHHhc
Q psy10566 10 RLIGQYLRTIG 20 (604)
Q Consensus 10 ~~~~~~~~~~~ 20 (604)
-|+||.|++=|
T Consensus 4 ellgqwlkdgg 14 (26)
T 1rij_A 4 ELLGQWLKDGG 14 (26)
T ss_dssp HHHHHHHHTTG
T ss_pred HHHHHHHHcCC
Confidence 48999999877
No 370
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=65.15 E-value=94 Score=29.34 Aligned_cols=229 Identities=10% Similarity=0.079 Sum_probs=123.0
Q ss_pred CCCCeEEEEeCCCceEEEEEECCCceEEE-------EecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-------
Q psy10566 357 PDSSHLLVVGPEDCHELWVWNIETELLRV-------KLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE------- 422 (604)
Q Consensus 357 pd~~~l~s~~~d~~~~i~vwd~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------- 422 (604)
|+...+++.+.+| .|+--.+.+..... .+.....+.+..+........++..+..|.++-+...
T Consensus 1 ~~e~~~v~~T~~G--~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLSHQG--YVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEETTS--EEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEeCCC--EEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCC
Confidence 3456778888888 67766654422111 1111233456566666677788888889987776541
Q ss_pred ---CCeee---ee-eceeEEEEEEc---CCCCEEEEEeCCCeEEEEEcCCCccc-----c--cccCCCCeeEEEECCCCC
Q psy10566 423 ---GQVLD---SW-EGVRVNCLWCR---SDGKSVLAADTHHRIRTYNFEHLTDS-----N--LLQEDHPVMSFTIDATDR 485 (604)
Q Consensus 423 ---~~~~~---~~-~~~~v~~l~~s---~~g~~l~~~~~dg~I~i~d~~~~~~~-----~--~~~~~~~i~~~~~s~~~~ 485 (604)
|..+. .+ .+..|..+... .++.+++..+.+|.++...+...... . .+.....+..+.......
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGED 158 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTC
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCC
Confidence 22111 11 23345555442 35667999999999999987543211 1 112335566655555666
Q ss_pred EEEEEecCCeEEEEecCCCce-------eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC---------C
Q psy10566 486 LALLNVSTQGVHLWDLRDRIL-------LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR---------E 549 (604)
Q Consensus 486 ~l~~~~~dg~I~lwd~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~---------~ 549 (604)
.++..+.+|.+..++...-.. ++-+.-. .....+..... .++..+++.+..|.++-.++.. |
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~-~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVP-RGDGAILTATQNGYGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECC-CSSCEEEEEETTSEEEEECGGGSCCCCTTSCC
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEe-cCCCEEEEEEcCCceEEEEHHHhccCCCCCCC
Confidence 788888999888887643211 1111111 11122322222 3456788889999998887742 1
Q ss_pred cceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCC
Q psy10566 550 LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590 (604)
Q Consensus 550 ~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~ 590 (604)
.....+..-.+.+..+....+ ..-++..+.+|.+.-..++
T Consensus 237 ~~~~~~~~~~~~lv~~~~v~~-~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 237 VISIKVTERNGLVVGAVQVDD-CDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp EESSCCCTTTCSEEEEEEECT-TCEEEEEESSCCEEEEEGG
T ss_pred EEeeEecCCCCeEEEEEEeCC-CceEEEEcCCCcEEEEecc
Confidence 112223223345555444333 3344555667766555443
No 371
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=64.82 E-value=1.1e+02 Score=29.94 Aligned_cols=220 Identities=17% Similarity=0.251 Sum_probs=117.0
Q ss_pred CeEEEEeCCCceEEEEEECCCc-----------eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CCe-
Q psy10566 360 SHLLVVGPEDCHELWVWNIETE-----------LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQV- 425 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~- 425 (604)
...+....++ .|+.|-.... .....+.......+..++.+....+.+.-..||.|+.|-.. ++.
T Consensus 63 ~~~~~l~~~G--~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 63 QTLFAVTADG--KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp TEEEEEETTS--CEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CeEEEEcCCC--cEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 3455556666 6888854321 11222221223345556777667777788889999999652 110
Q ss_pred ------------eeeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcc-----------cccc--cCCCCeeEEEE
Q psy10566 426 ------------LDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTD-----------SNLL--QEDHPVMSFTI 480 (604)
Q Consensus 426 ------------~~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~-----------~~~~--~~~~~i~~~~~ 480 (604)
+..+.+..|..++.. ....++...+|.|+.|-....-. ...+ .....+..++.
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 111112245555443 45566677889999997543110 0001 12345667776
Q ss_pred CCCCCEEEEEecCCeEEEEecCCCc-----------eeeEeecccc-ceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 481 DATDRLALLNVSTQGVHLWDLRDRI-----------LLRKFQGVTQ-GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 481 s~~~~~l~~~~~dg~I~lwd~~~~~-----------~~~~~~~~~~-~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
.....+.++-..+|.|+.|-..... ....+..... .+..|.+ ...+.+.-..||.|+.|-...
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~-----G~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC-----GSQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEE-----ETTEEEEEETTSCEEEEECCG
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeC-----CCCEEEEEeCCCeEEEEeCCC
Confidence 5545677777889999999654311 0111111111 1222221 123445556899999997642
Q ss_pred C-c-------c---eEEeeC-CCCCeeEEEEcCCCCcEEEEEeCCCcEEEECCCC
Q psy10566 549 E-L-------P---IATLSG-HTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHL 591 (604)
Q Consensus 549 ~-~-------~---~~~l~~-h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~~~ 591 (604)
. + . ...+.. ....|..|+... ...+....||.|..|-...
T Consensus 294 ~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~---~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 294 YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS---LHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTCCEEEEECCT
T ss_pred CCCCCCCCCccccCCeEeccCCCCCEEEEEecc---CeEEEECCCCCEEEeeCCC
Confidence 1 1 0 111111 123577776653 3445557899999997654
No 372
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=63.94 E-value=1.1e+02 Score=29.77 Aligned_cols=144 Identities=12% Similarity=0.095 Sum_probs=90.7
Q ss_pred ECCCCCeEEEEeCCCceEEEEEECCC---------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC---
Q psy10566 355 WSPDSSHLLVVGPEDCHELWVWNIET---------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--- 422 (604)
Q Consensus 355 ~spd~~~l~s~~~d~~~~i~vwd~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--- 422 (604)
+-|+..++++.+.+| .|+--.+.. |..-..+. ..+.+..+........++..+..|.++-+...
T Consensus 3 lI~~e~~~v~lT~~G--yIKr~~l~~y~~~~r~g~g~~~~~lk--e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip 78 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAG--YAKRQPVSAYRAQRRGGRGRSAASTK--EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLP 78 (370)
T ss_dssp CCCCCCEEEEEESSC--EEEEEEHHHHHHTCCCCCCSEEEECS--CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSC
T ss_pred cccCCCEEEEEeCCC--EEEEeeHHHhhhhccCCCCceecccC--CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCc
Confidence 347778899999998 787755422 22222332 45667777777777888888999988776541
Q ss_pred -------CCeeee---e-eceeEEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCcccc-------cccCCCCeeEEEEC
Q psy10566 423 -------GQVLDS---W-EGVRVNCLWCRS---DGKSVLAADTHHRIRTYNFEHLTDSN-------LLQEDHPVMSFTID 481 (604)
Q Consensus 423 -------~~~~~~---~-~~~~v~~l~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~~-------~~~~~~~i~~~~~s 481 (604)
|..+.. + .+..|..+.... ++.+++.++..|.++...+....... .+.....+..+...
T Consensus 79 ~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~ 158 (370)
T 3l6v_A 79 EAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALT 158 (370)
T ss_dssp BCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEE
T ss_pred CCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEe
Confidence 211111 1 233555554432 45689999999999999875432211 12234555555555
Q ss_pred CCCCEEEEEecCCeEEEEecC
Q psy10566 482 ATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 482 ~~~~~l~~~~~dg~I~lwd~~ 502 (604)
.....++..+.+|.+..++..
T Consensus 159 ~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 159 DGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CSCCEEEEEETTSEEEEEEGG
T ss_pred CCCceEEEEeCCCeEEEEEcc
Confidence 566678888888988878754
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=63.79 E-value=1.1e+02 Score=29.80 Aligned_cols=223 Identities=16% Similarity=0.237 Sum_probs=116.0
Q ss_pred eEEEEECCCeEEEEEeCCC-------CceeEeeEEecc-CCCCeeEEEECCCCCeEEEEeCCCceEEEEEECCCc-----
Q psy10566 315 KLATGSKDTTVIIWDVDPV-------TFTCQHRKTLEG-HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETE----- 381 (604)
Q Consensus 315 ~lasgs~dg~i~iwd~~~~-------~~~~~~~~~l~~-h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~----- 381 (604)
..+.-..||.|..|-.... .........+.. ....+..++.+....+.++...++ .|+.|-....
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G--~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG--EVYSWGEAEDGKLGH 141 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTS--CEEEEECCGGGTTCS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCC--CEEEEeCCCCCcCCC
Confidence 4444467888888864411 001111122221 223455566766666777777787 7999964321
Q ss_pred ------eEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC--CC-------------eeeeeeceeEEEEEEc
Q psy10566 382 ------LLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--GQ-------------VLDSWEGVRVNCLWCR 440 (604)
Q Consensus 382 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~-------------~~~~~~~~~v~~l~~s 440 (604)
.....+.......|..++. .....++-..+|.|+.|-.. ++ .+..+.+.++..+++.
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 1112222112224555544 34566667789999999652 11 0111123357777776
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCccc-----------cccc--CCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCc--
Q psy10566 441 SDGKSVLAADTHHRIRTYNFEHLTDS-----------NLLQ--EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI-- 505 (604)
Q Consensus 441 ~~g~~l~~~~~dg~I~i~d~~~~~~~-----------~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~-- 505 (604)
......++...+|.|+.|-....-.. ..+. ....|..++.. ..+.++-..+|.|+.|-.....
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqL 297 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRL 297 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTT
T ss_pred CCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCC
Confidence 55567777889999999975431110 0011 12235555543 3455555788999999654311
Q ss_pred ---------eeeEeeccc-cceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC
Q psy10566 506 ---------LLRKFQGVT-QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKR 548 (604)
Q Consensus 506 ---------~~~~~~~~~-~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~ 548 (604)
....+.... ..+..|. ......+.-..||.|+.|=...
T Consensus 298 G~g~~~~~~~P~~v~~l~~~~v~~ia-----~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 298 GHGSDDHVRRPRQVQGLQGKKVIAIA-----TGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTCCEEEEE-----ECSSEEEEEETTCCEEEEECCT
T ss_pred CCCCCccccCCeEeccCCCCCEEEEE-----eccCeEEEECCCCCEEEeeCCC
Confidence 011111111 1122221 1223455557899999997764
No 374
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.88 E-value=1.8e+02 Score=32.55 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=33.5
Q ss_pred CCeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN 388 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~ 388 (604)
..|.+++..++..++++.+.|+ ++++|++.++.++....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~--~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDY--KLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTC--EEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCC--EEEEEECCCCCeEeeec
Confidence 3567888888889999999998 99999999999887653
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=59.05 E-value=29 Score=36.40 Aligned_cols=61 Identities=11% Similarity=0.115 Sum_probs=42.9
Q ss_pred eeEEEECCCCCeEEEEeCC----------CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10566 350 VAYLAWSPDSSHLLVVGPE----------DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410 (604)
Q Consensus 350 V~~l~~spd~~~l~s~~~d----------~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 410 (604)
.-.|+|+|.|.+++.-..+ +...+++.+..+++....+.......++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4578999999866654332 112577777778877666665566778899999988877654
No 376
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.28 E-value=56 Score=32.87 Aligned_cols=105 Identities=13% Similarity=0.104 Sum_probs=60.3
Q ss_pred ccCCCChHHHHHHHHH-HHhhcChHHHHHHHHH---HhCCccCCh-----hHHHHHHHHHcCChHHHHHHHhhhhhhcCC
Q psy10566 80 KTMTRTDEDIVRLIGQ-YLRTIGLDRTADLLMQ---ESGCKLDHP-----SAAKFRQHIMDGDWSKADHDLNDLEYLLDS 150 (604)
Q Consensus 80 ~~~~~~~~e~~~lI~q-~L~e~g~~~s~~~L~~---Es~~~~~~~-----~~~~l~~~i~~g~w~~~~~~l~~l~~~~~~ 150 (604)
.+++..|..+.+.+.. |.++..|.+|+..|++ |+.-..+.. -+.+.|-++..+||..|..++.+......+
T Consensus 130 iflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~ 209 (445)
T 4b4t_P 130 IFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFK 209 (445)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcc
Confidence 4566667777666666 5555669999877655 765433321 146678888999999999999876432111
Q ss_pred ccchhhhHHHHHHHHHHHHHhcCChhHHHHHHHh
Q psy10566 151 RGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRN 184 (604)
Q Consensus 151 ~~~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~ 184 (604)
..........++.+.-.-+...+++.+|...+..
T Consensus 210 ~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e 243 (445)
T 4b4t_P 210 NPKYESLKLEYYNLLVKISLHKREYLEVAQYLQE 243 (445)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1112222223333333333345555555544444
No 377
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=55.98 E-value=1.4e+02 Score=28.20 Aligned_cols=189 Identities=12% Similarity=0.068 Sum_probs=104.4
Q ss_pred CCCCeEEEEECCCeEEEEEeCCCC-----ceeEeeEEeccCCCCeeEEEECCCCCeEEEEeCCCceEEEEEE---CCC--
Q psy10566 311 PDGLKLATGSKDTTVIIWDVDPVT-----FTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN---IET-- 380 (604)
Q Consensus 311 pdg~~lasgs~dg~i~iwd~~~~~-----~~~~~~~~l~~h~~~V~~l~~spd~~~l~s~~~d~~~~i~vwd---~~~-- 380 (604)
|+..++++.+.+|.|+--.+.... +.+.....+..+ +.+..+........++..+..| .++-+. +..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G--~~~~~~~~elp~~~ 77 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRG--RVYSMKVYQLPEAT 77 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTS--EEEEEEGGGSCCCC
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCC--EEEEEEhhHCcCCC
Confidence 355678888999999876664110 001111122222 3344444444455666666666 444443 322
Q ss_pred ----ceEEEEe-cCCCCCCeEEEEEe---cCCCEEEEEecCCeEEEEEcC--------CCeeeee-eceeEEEEEEcCCC
Q psy10566 381 ----ELLRVKL-NHSPEDSLTSCSWN---RDGTKFVCGGIRGQFYQCDIE--------GQVLDSW-EGVRVNCLWCRSDG 443 (604)
Q Consensus 381 ----~~~~~~~-~~~~~~~v~~~~~~---~~~~~l~s~~~dg~i~iwd~~--------~~~~~~~-~~~~v~~l~~s~~g 443 (604)
|..+..+ .......|.++... .++.+++..+.+|.++-..+. |.....+ .+..+..+....+.
T Consensus 78 ~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~ 157 (307)
T 1zi0_A 78 RGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGE 157 (307)
T ss_dssp SSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTT
T ss_pred CCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCC
Confidence 2221111 11233456665443 356689999999999988763 1111111 22345555555556
Q ss_pred CEEEEEeCCCeEEEEEcCCCccc---------ccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 444 KSVLAADTHHRIRTYNFEHLTDS---------NLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 444 ~~l~~~~~dg~I~i~d~~~~~~~---------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
..++..+.+|.+..++...-... ..+.....|.++....++..+++.+..|.++-.++.
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 67888999999888887543221 112235567777666666778889999998888774
No 378
>2k9m_A RNA polymerase sigma factor RPON; core binding domain, transcription; NMR {Aquifex aeolicus}
Probab=55.02 E-value=16 Score=29.70 Aligned_cols=33 Identities=12% Similarity=0.311 Sum_probs=22.7
Q ss_pred CCChHHHHHHHHHHHhhcChH-HHHHHHHHHhCC
Q psy10566 83 TRTDEDIVRLIGQYLRTIGLD-RTADLLMQESGC 115 (604)
Q Consensus 83 ~~~~~e~~~lI~q~L~e~g~~-~s~~~L~~Es~~ 115 (604)
+-...++...|+..|.+.||- .+...+.++.|+
T Consensus 18 ~~~~~~ia~~iI~~LD~~GYL~~~l~eia~~l~~ 51 (130)
T 2k9m_A 18 EGKEQELALELLNYLNEKGFLSKSVEEISDVLRC 51 (130)
T ss_dssp CSHHHHHHHHHTTSBCTTSSBSSCHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHcCC
Confidence 334567888899999999985 345555555553
No 379
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=53.51 E-value=57 Score=33.92 Aligned_cols=63 Identities=11% Similarity=0.098 Sum_probs=39.9
Q ss_pred CCeeEEEECCCCCeEEEEeCC----------CceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10566 348 LGVAYLAWSPDSSHLLVVGPE----------DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410 (604)
Q Consensus 348 ~~V~~l~~spd~~~l~s~~~d----------~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 410 (604)
.....|+|.++|.+.+..... +...++.++..+++....+.......++.++|+||++.|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 345679999999877743221 111577777777776555442334557888888888777665
No 380
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=52.70 E-value=81 Score=24.67 Aligned_cols=100 Identities=10% Similarity=-0.035 Sum_probs=56.5
Q ss_pred HHHhhcChHHHHHHHHHHhCCccCChhHHHH--HHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHHHHHHhc
Q psy10566 95 QYLRTIGLDRTADLLMQESGCKLDHPSAAKF--RQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKYLEYLED 172 (604)
Q Consensus 95 q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l--~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~le~le~ 172 (604)
.|++...|.+|...+++=..+.-+.+.+-.. .-....|+|++|+..+...-.. .+. .. ..+-..=.-+...
T Consensus 22 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p~-~~-----~a~~~lg~~~~~~ 94 (126)
T 4gco_A 22 EYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRL-DSK-FI-----KGYIRKAACLVAM 94 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTT-CH-----HHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh-hhh-hh-----HHHHHHHHHHHHC
Confidence 3777778999999888754333233322221 3344679999999988754221 111 11 1111222233567
Q ss_pred CChhHHHHHHHhhcCCCCCChhhhhhhhh
Q psy10566 173 GRVLDALHVLRNELTPLNHNTAKVHELSS 201 (604)
Q Consensus 173 ~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ 201 (604)
++..+|+..+++-+.--+.+.+-...|..
T Consensus 95 ~~~~~A~~~~~~al~l~P~~~~a~~~l~~ 123 (126)
T 4gco_A 95 REWSKAQRAYEDALQVDPSNEEAREGVRN 123 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 88999999999865433444444444433
No 381
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=51.20 E-value=1.7e+02 Score=27.87 Aligned_cols=225 Identities=7% Similarity=-0.007 Sum_probs=122.6
Q ss_pred CeEEEEeCCCceEEEEEECCC-------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC----------
Q psy10566 360 SHLLVVGPEDCHELWVWNIET-------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE---------- 422 (604)
Q Consensus 360 ~~l~s~~~d~~~~i~vwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---------- 422 (604)
..+++.+.+| .|+--.+.+ +.-.........+.+..+........++.-+..|.++.....
T Consensus 4 ~v~v~ls~~G--yiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 4 DVVVTITETG--YAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp EEEEEEETTS--EEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred cEEEEEeCCC--EEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 3566777777 666554322 111122222234456666666677778888888877766541
Q ss_pred CCeeee---e-eceeEEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCcccc-------cccCCCCeeEEEECCCCCEEE
Q psy10566 423 GQVLDS---W-EGVRVNCLWCRS---DGKSVLAADTHHRIRTYNFEHLTDSN-------LLQEDHPVMSFTIDATDRLAL 488 (604)
Q Consensus 423 ~~~~~~---~-~~~~v~~l~~s~---~g~~l~~~~~dg~I~i~d~~~~~~~~-------~~~~~~~i~~~~~s~~~~~l~ 488 (604)
|..+.. + .+..|..+...+ +...++..+.+|.++...+....... .+.....+..+........++
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 121111 1 233555554433 57899999999999999876532211 122345566666656667888
Q ss_pred EEecCCeEEEEecC--CCce-------eeEeeccccceEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCCC-------cce
Q psy10566 489 LNVSTQGVHLWDLR--DRIL-------LRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRE-------LPI 552 (604)
Q Consensus 489 ~~~~dg~I~lwd~~--~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~~-------~~~ 552 (604)
..+..|.+..+... .-.. ++-+.- ......+..... +.+.+++..+..|.++.-.+..- +-+
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~-~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~ 239 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVV-REGTYLLVATSGGYAKRTAIEEYPVQGRGGKGV 239 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEEC-CTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEE-CCCCEEEEEeCCCcEEEEEHHHccccCcCCCcE
Confidence 89999998888766 2111 111111 111122333333 34568889999999988875421 112
Q ss_pred EE--eeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 553 AT--LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 553 ~~--l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
.. +..-.+.+..+..... ...++..+.+|.+.-+..
T Consensus 240 ~~~~l~~~~d~lv~~~~~~~-~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 240 LTVMYDRRRGRLVGALIVDD-DSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp ESSCCCTTTCSEEEEEEECT-TCEEEEEEGGGCEEEEEG
T ss_pred EEEEecCCCCeEEEEEEeCC-CccEEEEcCCCeEEEEeh
Confidence 22 2221334555444333 345555666776665644
No 382
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.70 E-value=28 Score=40.07 Aligned_cols=30 Identities=13% Similarity=0.069 Sum_probs=26.6
Q ss_pred CCCCcEEEEEeCCCcEEEEeCCCCcceEEe
Q psy10566 526 GANQDFVASGSEDGKVYIWHVKRELPIATL 555 (604)
Q Consensus 526 ~~~~~~l~sgs~dg~I~iwd~~~~~~~~~l 555 (604)
.++..++++-+.|+++|||++.+++++.+.
T Consensus 246 ~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 246 LSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp ETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred cCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 357789999999999999999999988875
No 383
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=46.49 E-value=3.2e+02 Score=29.69 Aligned_cols=150 Identities=8% Similarity=-0.018 Sum_probs=74.2
Q ss_pred CCcEEEEEEcCCC-CeEEEEECCCeEEEEEeCCCCceeEeeEEecc----CCCCeeEEEECCCC-CeEEEEeCCCc--eE
Q psy10566 301 CDEVWFCKFSPDG-LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG----HTLGVAYLAWSPDS-SHLLVVGPEDC--HE 372 (604)
Q Consensus 301 ~~~V~~v~fspdg-~~lasgs~dg~i~iwd~~~~~~~~~~~~~l~~----h~~~V~~l~~spd~-~~l~s~~~d~~--~~ 372 (604)
.+.|.+++++|.. ..+..++..+.|.. ..+...+++.+..... ....|.+|++.|.. ..++++..... ..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~r--S~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYR--WDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEE--EETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEE--ecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 4589999999963 45556666665544 3333445554322111 12469999999853 34444432210 00
Q ss_pred EEEEE-CCCceEEEEecCC--------CCCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCeeeeeec--------eeE
Q psy10566 373 LWVWN-IETELLRVKLNHS--------PEDSLTSCSWNRD-GTKFVCGGIRGQFYQCDIEGQVLDSWEG--------VRV 434 (604)
Q Consensus 373 i~vwd-~~~~~~~~~~~~~--------~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~v 434 (604)
-.||. .+.|+.-...... ....+..++++|. ...++.+...+.|..=+=.|+....... ..+
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTTCE
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCCCe
Confidence 22333 3334322222111 0113567888874 3456666544443321112343333221 346
Q ss_pred EEEEEcCC-CCEEEEEeCC
Q psy10566 435 NCLWCRSD-GKSVLAADTH 452 (604)
Q Consensus 435 ~~l~~s~~-g~~l~~~~~d 452 (604)
..+.+.|. +..++++..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 78888874 4566666554
No 384
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=45.63 E-value=31 Score=28.28 Aligned_cols=51 Identities=10% Similarity=0.287 Sum_probs=37.7
Q ss_pred chhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhc
Q psy10566 153 DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFM 203 (604)
Q Consensus 153 ~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll 203 (604)
.+..++|.++-+-||+++..|...+|..++.+.-.-.....+.+++|+.+.
T Consensus 29 EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~i~~L~~i~ 79 (138)
T 2j4b_A 29 DLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNKSEEIKQFESIY 79 (138)
T ss_dssp HHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--CHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhHHHHHHHHhcCC
Confidence 456788999999999999999999999999886332322255666665543
No 385
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=43.40 E-value=2e+02 Score=26.51 Aligned_cols=194 Identities=11% Similarity=0.042 Sum_probs=112.7
Q ss_pred CCCeEEEEEecCCCEEEEEecCCeEEEEEc----CC--CeeeeeeceeEEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCc
Q psy10566 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDI----EG--QVLDSWEGVRVNCLWCRS-DGKSVLAADTHHRIRTYNFEHLT 464 (604)
Q Consensus 392 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~----~~--~~~~~~~~~~v~~l~~s~-~g~~l~~~~~dg~I~i~d~~~~~ 464 (604)
.+.+..+.-.....+++..+..|.++-... .+ ..+ .-.+..|..+.... +...++..+.+|.++...+....
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~l-l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSL-KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCC-SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCccccc-CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 345666665666677888888887775443 11 112 11234566654422 56789999999999999876542
Q ss_pred ------ccccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCCCce-------eeEeeccccceEEEEeeeCCCCCcE
Q psy10566 465 ------DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRIL-------LRKFQGVTQGQFTIHSCFGGANQDF 531 (604)
Q Consensus 465 ------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~ 531 (604)
....+.....+..+........++..+..|.+..++...-.. +.-+.-. .....+..... .++.+
T Consensus 102 ~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~-~~~~~ 179 (276)
T 3no0_A 102 YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIW-NGEPY 179 (276)
T ss_dssp TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEE-SSCSE
T ss_pred hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEe-CCCCE
Confidence 111122345666666666777899999999988887643111 1111111 11112222222 44568
Q ss_pred EEEEeCCCcEEEEeCCC-------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEE--ECCC
Q psy10566 532 VASGSEDGKVYIWHVKR-------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRI--WGPH 590 (604)
Q Consensus 532 l~sgs~dg~I~iwd~~~-------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~i--W~~~ 590 (604)
++..+..|.++...+.. ++-+..+ ...+.+..+..... ...++..+.+|.+.. ++.+
T Consensus 180 ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~-~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 180 LLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE-EVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS-EEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC-CCEEEEEcCCCeEEEeeeCHH
Confidence 88899999999887642 2223333 23344555443333 345666777888776 6543
No 386
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=42.53 E-value=1.1e+02 Score=23.24 Aligned_cols=97 Identities=7% Similarity=-0.106 Sum_probs=59.2
Q ss_pred CChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHH--HHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHH
Q psy10566 84 RTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKF--RQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLI 161 (604)
Q Consensus 84 ~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l--~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~ 161 (604)
........+-..+++...|.+|...+++=....-+...+-.. .-....|+|++|...+...-.... . .. . .
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-~-~~-~----~ 86 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP-T-FI-K----G 86 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT-T-CH-H----H
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-C-ch-H----H
Confidence 345666667777788888999999998876654443332222 223467999999998886543221 1 11 1 1
Q ss_pred HHHHHHHHHhcCChhHHHHHHHhhcC
Q psy10566 162 LEQKYLEYLEDGRVLDALHVLRNELT 187 (604)
Q Consensus 162 ~~~~~le~le~~~~~~Al~~l~~~l~ 187 (604)
+-..-.-+...++..+|+..+++.+.
T Consensus 87 ~~~la~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 87 YTRKAAALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 11111223467889999999988543
No 387
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=39.82 E-value=1.3e+02 Score=23.35 Aligned_cols=91 Identities=4% Similarity=-0.015 Sum_probs=48.1
Q ss_pred HHhhcChHHHHHHHHHHhCCccCChhH-HHH-HHHHHcCChHHHHHHHhhhhhhcC-CccchhhhHHHHHHHHHHHHHhc
Q psy10566 96 YLRTIGLDRTADLLMQESGCKLDHPSA-AKF-RQHIMDGDWSKADHDLNDLEYLLD-SRGDLVEMKFLILEQKYLEYLED 172 (604)
Q Consensus 96 ~L~e~g~~~s~~~L~~Es~~~~~~~~~-~~l-~~~i~~g~w~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~le~le~ 172 (604)
+.+...|.+|...+++=..+.-+.... ..+ .-....|+|++|+..+...-...+ ..... ..+-..+-..=.-....
T Consensus 18 ~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~-~~~a~~~~~lg~~~~~~ 96 (127)
T 4gcn_A 18 AYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY-KLIAKAMSRAGNAFQKQ 96 (127)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh-HHHHHHHHHHHHHHHHc
Confidence 666677899998888753332222221 111 234567999999998774321111 00001 00111111111223456
Q ss_pred CChhHHHHHHHhhcC
Q psy10566 173 GRVLDALHVLRNELT 187 (604)
Q Consensus 173 ~~~~~Al~~l~~~l~ 187 (604)
+++.+|+..+++.|.
T Consensus 97 ~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 97 NDLSLAVQWFHRSLS 111 (127)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 889999999888653
No 388
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=39.53 E-value=46 Score=35.64 Aligned_cols=31 Identities=10% Similarity=0.199 Sum_probs=26.8
Q ss_pred CCCcEEEEEeCCCcEEEEeCCCCcceEEeeC
Q psy10566 527 ANQDFVASGSEDGKVYIWHVKRELPIATLSG 557 (604)
Q Consensus 527 ~~~~~l~sgs~dg~I~iwd~~~~~~~~~l~~ 557 (604)
.+..++++-+.|.++|+|++++++++.+..-
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3477999999999999999999998877654
No 389
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.28 E-value=1.3e+02 Score=23.32 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=57.6
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCC---hhH-HH-HHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHH
Q psy10566 85 TDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDH---PSA-AK-FRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKF 159 (604)
Q Consensus 85 ~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~---~~~-~~-l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~ 159 (604)
+......+-..++....|.+|...+++=....-+. ..+ .. -......|+|++|...+...-.... . .. ..
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~-~~-~~-- 101 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG-G-DV-KA-- 101 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS-C-CH-HH--
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc-c-CH-HH--
Confidence 44555666666777788999999998876554432 111 11 1334577999999998876533221 1 11 11
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHhhcC
Q psy10566 160 LILEQKYLEYLEDGRVLDALHVLRNELT 187 (604)
Q Consensus 160 ~~~~~~~le~le~~~~~~Al~~l~~~l~ 187 (604)
+-..-.-+...++..+|+..+++-+.
T Consensus 102 --~~~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 102 --LYRRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp --HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 11111223456888999999988644
No 390
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=38.68 E-value=1.5e+02 Score=27.37 Aligned_cols=53 Identities=13% Similarity=0.152 Sum_probs=25.6
Q ss_pred HHHHHHHH-HHhhcChHHHHHHHHHHhCCccCChhHH--HHHHHHHcCChHHHHHHHhhhh
Q psy10566 88 DIVRLIGQ-YLRTIGLDRTADLLMQESGCKLDHPSAA--KFRQHIMDGDWSKADHDLNDLE 145 (604)
Q Consensus 88 e~~~lI~q-~L~e~g~~~s~~~L~~Es~~~~~~~~~~--~l~~~i~~g~w~~~~~~l~~l~ 145 (604)
++..++.+ +++...+.+|...|++ + +.+... .-.-....|++++|+..+..+.
T Consensus 102 ~~~~~la~~~~~~g~~~~Al~~l~~----~-~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~ 157 (291)
T 3mkr_A 102 TFLLMAASIYFYDQNPDAALRTLHQ----G-DSLECMAMTVQILLKLDRLDLARKELKKMQ 157 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTT----C-CSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHhC----C-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34344433 3344456666666665 1 112111 1223345577777777666553
No 391
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.34 E-value=88 Score=35.92 Aligned_cols=38 Identities=11% Similarity=0.153 Sum_probs=32.2
Q ss_pred CeeEEEECCCCCeEEEEeCCCceEEEEEECCCceEEEEec
Q psy10566 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLN 388 (604)
Q Consensus 349 ~V~~l~~spd~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~ 388 (604)
.+.+++..++..++++.+.|+ ++++|++.++.++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~--~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDY--KLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTC--EEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCC--EEEEEECCCCCeEEeec
Confidence 456667778889999999998 99999999999887654
No 392
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=37.06 E-value=2.5e+02 Score=25.77 Aligned_cols=89 Identities=18% Similarity=0.131 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHhhcC-hHHHHHHHHHHh--CCccCChhHHHH--HHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHH
Q psy10566 86 DEDIVRLIGQYLRTIG-LDRTADLLMQES--GCKLDHPSAAKF--RQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFL 160 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g-~~~s~~~L~~Es--~~~~~~~~~~~l--~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~ 160 (604)
.-+.++++.+++...| +.++...|++-. ++.-+.+.+... .-....|++++|+..+.+ + ... ..
T Consensus 64 ~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~--~-----~~~-~~--- 132 (291)
T 3mkr_A 64 ELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ--G-----DSL-EC--- 132 (291)
T ss_dssp HHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT--C-----CSH-HH---
T ss_pred hHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC--C-----CCH-HH---
Confidence 3457788888888776 888888888743 322333333332 344577999999998876 1 111 11
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHhhc
Q psy10566 161 ILEQKYLEYLEDGRVLDALHVLRNEL 186 (604)
Q Consensus 161 ~~~~~~le~le~~~~~~Al~~l~~~l 186 (604)
+-....-++..|+..+|...+++.+
T Consensus 133 -~~~l~~~~~~~g~~~~A~~~l~~~~ 157 (291)
T 3mkr_A 133 -MAMTVQILLKLDRLDLARKELKKMQ 157 (291)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1111112345677778887777753
No 393
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=36.11 E-value=1.8e+02 Score=31.19 Aligned_cols=28 Identities=18% Similarity=0.263 Sum_probs=23.1
Q ss_pred CcEEEEEEcCCCCeEEEEECCCeEEEEEeC
Q psy10566 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331 (604)
Q Consensus 302 ~~V~~v~fspdg~~lasgs~dg~i~iwd~~ 331 (604)
..|.++.+. ..++++-+.|.++|+|++.
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~ 249 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLT 249 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETT
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcC
Confidence 456666553 6799999999999999998
No 394
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=36.08 E-value=1.7e+02 Score=26.85 Aligned_cols=107 Identities=10% Similarity=0.001 Sum_probs=58.9
Q ss_pred HHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHH--HHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHHH
Q psy10566 90 VRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAK--FRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKYL 167 (604)
Q Consensus 90 ~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~--l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l 167 (604)
+.+-..+++...+.+|...+++=....-+.+.+.. -.-.+..|++++|...+.++-..- +. .. ...-..-+
T Consensus 121 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~-p~----~~--~~~~~~~~ 193 (287)
T 3qou_A 121 AQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD-QD----TR--YQGLVAQI 193 (287)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG-CS----HH--HHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh-cc----hH--HHHHHHHH
Confidence 33444456667788888777775444434433322 234557799999999988763321 11 11 11112223
Q ss_pred HHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhhc
Q psy10566 168 EYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSFM 203 (604)
Q Consensus 168 e~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~ll 203 (604)
.+.+.++..+|+..+++.+.--+.+.+....|..++
T Consensus 194 ~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 194 ELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 445556666677777776543444555555555544
No 395
>2bid_A Protein (BID); programmed cell death, apoptosis regulation and amplification; NMR {Homo sapiens} SCOP: f.1.4.1
Probab=36.04 E-value=20 Score=30.28 Aligned_cols=19 Identities=37% Similarity=0.672 Sum_probs=17.5
Q ss_pred CCchHHHHHHHHHHHHHhc
Q psy10566 2 TRTDEDIVRLIGQYLRTIG 20 (604)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~ 20 (604)
+.++|||||-|..||-.+|
T Consensus 78 sE~qEeiir~IA~qLAqiG 96 (197)
T 2bid_A 78 SESQEDIIRNIARHLAQVG 96 (197)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHH
Confidence 4578999999999999999
No 396
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=35.64 E-value=2.9e+02 Score=26.12 Aligned_cols=198 Identities=10% Similarity=0.045 Sum_probs=105.0
Q ss_pred cEEEEEEcCCCCeEEEEECCCeEEEEEeC---CCC--ceeEeeE---EeccCCCCeeEE-EECC--CCCeEEEEeCCCce
Q psy10566 303 EVWFCKFSPDGLKLATGSKDTTVIIWDVD---PVT--FTCQHRK---TLEGHTLGVAYL-AWSP--DSSHLLVVGPEDCH 371 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~dg~i~iwd~~---~~~--~~~~~~~---~l~~h~~~V~~l-~~sp--d~~~l~s~~~d~~~ 371 (604)
.+..+........|+..+..|.+.-.... ... ..+.++. .+. ....|.++ ...+ ++.+++.++..|
T Consensus 40 ~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G-- 116 (323)
T 1wp5_A 40 RLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNG-- 116 (323)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTS--
T ss_pred EEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCC--
Confidence 34444444444556666778876655443 111 1222111 122 22345544 3432 256788899998
Q ss_pred EEEEEECCC------ceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcC-----CC-----eeeee-eceeE
Q psy10566 372 ELWVWNIET------ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-----GQ-----VLDSW-EGVRV 434 (604)
Q Consensus 372 ~i~vwd~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-----~~-----~~~~~-~~~~v 434 (604)
.++...+.. +.-...+.....+.+..+........++..+.+|.+..+..+ ++ ....+ .+..|
T Consensus 117 ~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~V 196 (323)
T 1wp5_A 117 MVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYI 196 (323)
T ss_dssp EEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCE
T ss_pred eEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEE
Confidence 788777642 112222222233566666666667788999999999888763 11 11111 22346
Q ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEEcCCCccc-------cc---cc-CCCCeeEEEECCCCCEEEEEecCCeEEEEecC
Q psy10566 435 NCLWCRSDGK-SVLAADTHHRIRTYNFEHLTDS-------NL---LQ-EDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502 (604)
Q Consensus 435 ~~l~~s~~g~-~l~~~~~dg~I~i~d~~~~~~~-------~~---~~-~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~ 502 (604)
.++...+++. .+++.+..|..+..++...... .. .. ....+..+....++..++..+..|.+..+.+.
T Consensus 197 v~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 197 VSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp EEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred EEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 6665444455 7888999999888887652111 11 11 12244433333334455566666666555554
Q ss_pred C
Q psy10566 503 D 503 (604)
Q Consensus 503 ~ 503 (604)
.
T Consensus 277 ~ 277 (323)
T 1wp5_A 277 D 277 (323)
T ss_dssp G
T ss_pred h
Confidence 3
No 397
>1kdl_A YOPD protein; yersinia, amphipathic alpha helix, beta turn, structural protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=34.13 E-value=22 Score=19.20 Aligned_cols=12 Identities=50% Similarity=0.966 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHH
Q psy10566 6 EDIVRLIGQYLR 17 (604)
Q Consensus 6 ~~~~~~~~~~~~ 17 (604)
.|+++||-||-.
T Consensus 5 kDvlql~qQy~q 16 (26)
T 1kdl_A 5 KDVLRLIEQYVS 16 (26)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 488899988854
No 398
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=33.88 E-value=2.7e+02 Score=25.27 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=57.0
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHH---H----H-HHHHHcCChHHHHHHHhhhhhhcCCccchhhhHH
Q psy10566 88 DIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAA---K----F-RQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKF 159 (604)
Q Consensus 88 e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~---~----l-~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~ 159 (604)
++...+..++....|.++...+++.....-..+... . + .-....|++++|+..+.+.-.......+. ....
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~-~~~~ 155 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV-YQNL 155 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT-THHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch-HHHH
Confidence 445667778888999999988886654322222111 1 1 11235579999999877542211111111 1123
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHhhc
Q psy10566 160 LILEQKYLEYLEDGRVLDALHVLRNEL 186 (604)
Q Consensus 160 ~~~~~~~le~le~~~~~~Al~~l~~~l 186 (604)
.++...-.-+.+.+++.+|+..+.+.+
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal 182 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQIL 182 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344444455567889999999988865
No 399
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=33.36 E-value=21 Score=26.23 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=28.5
Q ss_pred CCCChHHHHHHHHHHHhhcChHHHHHHHHHHhCCccC
Q psy10566 82 MTRTDEDIVRLIGQYLRTIGLDRTADLLMQESGCKLD 118 (604)
Q Consensus 82 ~~~~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~ 118 (604)
-..+..++.+-|+++|+++| .++..|.++.|++-.
T Consensus 11 ~d~~~~~~~~~IL~lL~~~g--~sa~eLAk~LgiSk~ 45 (82)
T 1oyi_A 11 DERSNAEIVCEAIKTIGIEG--ATAAQLTRQLNMEKR 45 (82)
T ss_dssp --CCSHHHHHHHHHHHSSST--EEHHHHHHHSSSCHH
T ss_pred cccchHHHHHHHHHHHHHcC--CCHHHHHHHHCcCHH
Confidence 34467789999999999999 899999999998653
No 400
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=33.35 E-value=3.7e+02 Score=26.59 Aligned_cols=98 Identities=11% Similarity=-0.006 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHhCC-----ccCChhHHHH-----HHHHHcCChHHHHHHHhhhh----hhcCCcc
Q psy10566 87 EDIVRLIGQYLRTIGLDRTADLLMQESGC-----KLDHPSAAKF-----RQHIMDGDWSKADHDLNDLE----YLLDSRG 152 (604)
Q Consensus 87 ~e~~~lI~q~L~e~g~~~s~~~L~~Es~~-----~~~~~~~~~l-----~~~i~~g~w~~~~~~l~~l~----~~~~~~~ 152 (604)
+++++.|.++-....|.++...+++-..+ .-+++.+... .-+...|+|++|+.+..+.- ..+.+.
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~- 366 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS- 366 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-
Confidence 45666777777777788887776665433 2345544332 22345799999999876432 122211
Q ss_pred chhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcC
Q psy10566 153 DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELT 187 (604)
Q Consensus 153 ~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~ 187 (604)
.......+.+-..+ +..+|++.+|+.++++.+.
T Consensus 367 -Hp~~a~~l~nLa~~-~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 367 -HPVRGVQVMKVGKL-QLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp -CHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred -ChHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHH
Confidence 12222223322222 2356888888888888543
No 401
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=33.07 E-value=32 Score=23.80 Aligned_cols=33 Identities=24% Similarity=0.103 Sum_probs=28.9
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHHHHhCCcc
Q psy10566 85 TDEDIVRLIGQYLRTIGLDRTADLLMQESGCKL 117 (604)
Q Consensus 85 ~~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~ 117 (604)
+|+.+.|||+--|.==||.+.|..|..+-+..-
T Consensus 15 ~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~ 47 (66)
T 2xz2_A 15 NREILYRLMISQLMYDGLEKFAMELSMLVKADQ 47 (66)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC
Confidence 589999999988888899999999999988544
No 402
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.75 E-value=1.2e+02 Score=31.69 Aligned_cols=62 Identities=23% Similarity=0.157 Sum_probs=37.4
Q ss_pred cEEEEEEcCCCCeEEEEECC----------CeEEEEEeCCCCceeEeeEEeccC-CCCeeEEEECCCCCeEEEEe
Q psy10566 303 EVWFCKFSPDGLKLATGSKD----------TTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVG 366 (604)
Q Consensus 303 ~V~~v~fspdg~~lasgs~d----------g~i~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~spd~~~l~s~~ 366 (604)
..--|+|+|.|.+++.-..+ +.-.+|-..+..+.. ...+.++ ...++.++|+||++.|++.-
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~--~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI--RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE--EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE--EEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 34668999999966543211 122445444333333 3334343 46899999999998877653
No 403
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=30.24 E-value=3.1e+02 Score=24.84 Aligned_cols=145 Identities=9% Similarity=0.013 Sum_probs=78.0
Q ss_pred EEEEEeCCCeEEEEEcCCCcc-cccccCCCCeeEEEECCCCCEEEEEecCCeEEEEecCC-------CceeeEeeccccc
Q psy10566 445 SVLAADTHHRIRTYNFEHLTD-SNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRD-------RILLRKFQGVTQG 516 (604)
Q Consensus 445 ~l~~~~~dg~I~i~d~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~I~lwd~~~-------~~~~~~~~~~~~~ 516 (604)
.+++.+.+|.|+--....... ...+.....+..+........++..+..|.++-+.... |.++...-.....
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 355666777776665544221 11123344555555555556677778888876665432 2222111111112
Q ss_pred eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-------CcceEEeeCCCCCeeEEEEcCCCCcEEEEEeCCCcEEEECC
Q psy10566 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589 (604)
Q Consensus 517 ~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-------~~~~~~l~~h~~~V~~v~~sp~~~~~l~s~s~Dg~I~iW~~ 589 (604)
...+..+.. .++.+++.++..|.++...+.. |.....+.. .+.+..+...+++...++..+.+|.+..+..
T Consensus 84 e~Iv~~~~~-~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 84 ATVDHMLME-SDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp CCEEEEECC-CTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CEEEEEEEe-CCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 223333322 3566788899999999988742 333333432 2345555454222456778888998887766
Q ss_pred CC
Q psy10566 590 HL 591 (604)
Q Consensus 590 ~~ 591 (604)
+.
T Consensus 162 ~e 163 (256)
T 1zvt_A 162 SD 163 (256)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 404
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=30.16 E-value=95 Score=25.90 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=36.3
Q ss_pred chhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCC-CChhhhhhhhhh
Q psy10566 153 DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLN-HNTAKVHELSSF 202 (604)
Q Consensus 153 ~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~-~~~~~~~~L~~l 202 (604)
.+..++|.++-+-||+|+..|...+|..++.+.-.-.. ...+.+++|+.+
T Consensus 48 EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~~i~~L~~i 98 (156)
T 2nxp_A 48 ELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSL 98 (156)
T ss_dssp HHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHhHHHHHHHHHHHhcC
Confidence 45678899999999999999999999999998522221 223445555444
No 405
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=30.10 E-value=4.2e+02 Score=26.75 Aligned_cols=94 Identities=12% Similarity=-0.011 Sum_probs=60.2
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHHH--HhCCccCChhHHH-HHHHHHcCChHHHHHHHhhhhh-hcCCccchhhhHHH
Q psy10566 85 TDEDIVRLIGQYLRTIGLDRTADLLMQ--ESGCKLDHPSAAK-FRQHIMDGDWSKADHDLNDLEY-LLDSRGDLVEMKFL 160 (604)
Q Consensus 85 ~~~e~~~lI~q~L~e~g~~~s~~~L~~--Es~~~~~~~~~~~-l~~~i~~g~w~~~~~~l~~l~~-~~~~~~~~~~~~~~ 160 (604)
+..=..-||--|.+...+.+|...|++ +.|+..+...... +......|++++|..++..+.. -+.|+ ...|.
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd----~~ty~ 179 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE----EPELA 179 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC----HHHHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC----HHHHH
Confidence 333345566667777778888888764 6678766555444 4556688999999999987743 22222 22232
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHhh
Q psy10566 161 ILEQKYLEYLEDGRVLDALHVLRNE 185 (604)
Q Consensus 161 ~~~~~~le~le~~~~~~Al~~l~~~ 185 (604)
.+- --+...|+..+|+.+|++.
T Consensus 180 ~Li---~~~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 180 ALL---KVSMDTKNADKVYKTLQRL 201 (501)
T ss_dssp HHH---HHHHHTTCHHHHHHHHHHH
T ss_pred HHH---HHHhhCCCHHHHHHHHHHH
Confidence 222 2234678889999998874
No 406
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=29.66 E-value=2.6e+02 Score=23.79 Aligned_cols=110 Identities=14% Similarity=0.098 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHH------------------HHHHHcCChHHHHHHHhhhhhh
Q psy10566 86 DEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKF------------------RQHIMDGDWSKADHDLNDLEYL 147 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l------------------~~~i~~g~w~~~~~~l~~l~~~ 147 (604)
-++++..-..++....|.+|...+++=....-+.+.+... .-....|++++|...+.+.-..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4566677777888888999999888754332222221111 2345679999999988765322
Q ss_pred cCCccchhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhhhhhhh
Q psy10566 148 LDSRGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVHELSSF 202 (604)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~l 202 (604)
- |. .. .. +-..-.-+...|+..+|+..+++-+.--+.+......|..+
T Consensus 84 ~-p~-~~-~~----~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~ 131 (208)
T 3urz_A 84 A-PN-NV-DC----LEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNY 131 (208)
T ss_dssp C-TT-CH-HH----HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred C-CC-CH-HH----HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 1 11 11 11 11111223467889999999998654334444444444433
No 407
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=28.90 E-value=1.5e+02 Score=26.18 Aligned_cols=71 Identities=13% Similarity=0.159 Sum_probs=42.2
Q ss_pred HHHHHHhhhhhhc-CCccchhhhHHHHHHHHHHHHHhcCChhHHHHHHHhhcCCCCCChhhhh-hhhhhccccc
Q psy10566 136 KADHDLNDLEYLL-DSRGDLVEMKFLILEQKYLEYLEDGRVLDALHVLRNELTPLNHNTAKVH-ELSSFMMCSG 207 (604)
Q Consensus 136 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~l~p~~~~~~~~~-~L~~ll~~~~ 207 (604)
.|+..++.++... .++.-.......+..|..+=.++++++.+|..+|.+.+.- ..+...++ .|..++.+.+
T Consensus 90 SAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~-~~s~~kLr~kL~~II~~Kd 162 (235)
T 3bu8_A 90 SAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSK-DPTTQKLRNDLLNIIREKN 162 (235)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTT-CGGGHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcC-CCCchHHHHHHHHHHhccC
Confidence 3444555443322 1223345556677778888889999999999999996543 22233333 4555555443
No 408
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=28.70 E-value=3.3e+02 Score=24.66 Aligned_cols=111 Identities=20% Similarity=0.206 Sum_probs=68.1
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcC--------CCee----eeeeceeEEEEEEcCCCCEEEEEeCCCeEEEEEc
Q psy10566 393 DSLTSCSWNRDGTKFVCGGIRGQFYQCDIE--------GQVL----DSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNF 460 (604)
Q Consensus 393 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~--------~~~~----~~~~~~~v~~l~~s~~g~~l~~~~~dg~I~i~d~ 460 (604)
+.+..+........++..+..|.++-+... |..+ .--.+..|..+....++..++.++..|.++...+
T Consensus 33 D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~ 112 (256)
T 1zvt_A 33 DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTF 112 (256)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEH
Confidence 445555555556677778888887766541 2111 1112335666644456777899999999999987
Q ss_pred CCCcc-------cccccCCCCeeEEEEC-CCCCEEEEEecCCeEEEEecCC
Q psy10566 461 EHLTD-------SNLLQEDHPVMSFTID-ATDRLALLNVSTQGVHLWDLRD 503 (604)
Q Consensus 461 ~~~~~-------~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~I~lwd~~~ 503 (604)
..... ...+.....+..+... ..+..++..+.+|.+..++...
T Consensus 113 ~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 113 NDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp GGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred HHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 54321 1112233455555555 3456788899999988888754
No 409
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=28.15 E-value=40 Score=25.15 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=17.2
Q ss_pred ccCCCChHHHHHHHHHHHhhc
Q psy10566 80 KTMTRTDEDIVRLIGQYLRTI 100 (604)
Q Consensus 80 ~~~~~~~~e~~~lI~q~L~e~ 100 (604)
..|+.+++++...|+|||+..
T Consensus 13 ~~~~~skKrLA~sIIdFL~~s 33 (92)
T 4asv_A 13 DMMSASKEEIAALIVNYFSSI 33 (92)
T ss_dssp -CCCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHh
Confidence 457778999999999999864
No 410
>3iz6_S 40S ribosomal protein S19 (S19E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=26.05 E-value=62 Score=26.56 Aligned_cols=24 Identities=25% Similarity=0.318 Sum_probs=18.9
Q ss_pred ccCCCChHHHHHHHHHHHhhcChH
Q psy10566 80 KTMTRTDEDIVRLIGQYLRTIGLD 103 (604)
Q Consensus 80 ~~~~~~~~e~~~lI~q~L~e~g~~ 103 (604)
..+..-..-|+|-|+|-|++.||-
T Consensus 93 ~h~~~asg~iiR~~LQqLE~~g~V 116 (146)
T 3iz6_S 93 PHFCKSSGAISRNILQQLQKMGII 116 (146)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTSE
T ss_pred CcccCCCcHHHHHHHHHHHHCCCe
Confidence 334445677999999999999984
No 411
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=25.67 E-value=1.8e+02 Score=26.79 Aligned_cols=54 Identities=20% Similarity=0.243 Sum_probs=39.7
Q ss_pred HHHHHhhcChHHHHHHHHHHhCCc-cCCh-hHHHHHHHHHcCChHHHHHHHhhhhh
Q psy10566 93 IGQYLRTIGLDRTADLLMQESGCK-LDHP-SAAKFRQHIMDGDWSKADHDLNDLEY 146 (604)
Q Consensus 93 I~q~L~e~g~~~s~~~L~~Es~~~-~~~~-~~~~l~~~i~~g~w~~~~~~l~~l~~ 146 (604)
+.+.|++..+.++...++.+-.-+ -|.. +..-|.=.-+.|+|+.|+..|+-+..
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~ 59 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIK 59 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 456889999999999999986532 2322 24445556688999999999986644
No 412
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=24.41 E-value=2e+02 Score=20.79 Aligned_cols=92 Identities=13% Similarity=-0.063 Sum_probs=53.3
Q ss_pred HHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHH-H-HHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHH
Q psy10566 89 IVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAA-K-FRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKY 166 (604)
Q Consensus 89 ~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~-~-l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 166 (604)
...+...++....|.+|...+++=....-+.+.+- . -.-....|+|++|...+...-.... . .. ..+...-
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~-~~-----~~~~~~a 79 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-D-WG-----KGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-T-CH-----HHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc-c-cH-----HHHHHHH
Confidence 44555557777788888888887544332233221 1 1334567999999998886533221 1 11 1111111
Q ss_pred HHHHhcCChhHHHHHHHhhcC
Q psy10566 167 LEYLEDGRVLDALHVLRNELT 187 (604)
Q Consensus 167 le~le~~~~~~Al~~l~~~l~ 187 (604)
.-+...++..+|+..+++.+.
T Consensus 80 ~~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 80 AALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHhhHHHHHHHHHHHHH
Confidence 223457888999999988654
No 413
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.32 E-value=5e+02 Score=25.22 Aligned_cols=186 Identities=8% Similarity=0.065 Sum_probs=97.6
Q ss_pred EEEEEECCCc--eEEEEecCC-----CCCCeEEEEEe---cC----CCEEEEEe-cCCeEEEEEcCC-CeeeeeeceeEE
Q psy10566 372 ELWVWNIETE--LLRVKLNHS-----PEDSLTSCSWN---RD----GTKFVCGG-IRGQFYQCDIEG-QVLDSWEGVRVN 435 (604)
Q Consensus 372 ~i~vwd~~~~--~~~~~~~~~-----~~~~v~~~~~~---~~----~~~l~s~~-~dg~i~iwd~~~-~~~~~~~~~~v~ 435 (604)
+|.+||+.++ +.++++... ....+..+.+. |+ +.++..+. ..+.|.++|+.. +..+..+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~---- 199 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHP---- 199 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECG----
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccC----
Confidence 7899999998 877776532 23457777777 22 23333333 356788888853 33333221
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCcccccccCCCCeeEEEECCC----CCEEEEEecCC-eEEEEe---cCCCcee
Q psy10566 436 CLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT----DRLALLNVSTQ-GVHLWD---LRDRILL 507 (604)
Q Consensus 436 ~l~~s~~g~~l~~~~~dg~I~i~d~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~~dg-~I~lwd---~~~~~~~ 507 (604)
.+.|+....+. -+|.-.-| ...+..++++|+ ++.|+.....+ .++-.. +++....
T Consensus 200 --~~~pd~~~~~~--i~G~~~~~-------------~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~ 262 (381)
T 3q6k_A 200 --TFKAERPTKFD--YGGKEYEF-------------KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGK 262 (381)
T ss_dssp --GGSCCSCEEEE--ETTEEEEE-------------CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCC
T ss_pred --CCccccCcceE--ECCEEeEe-------------ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchh
Confidence 13344111111 12221111 346889999998 77777766554 333333 2222211
Q ss_pred eE--eeccccc-eEEEEeeeCCCCCcEEEEEeCCCcEEEEeCCC-C---cceEEeeC--CCCCeeEEEEcCCCCcEEEEE
Q psy10566 508 RK--FQGVTQG-QFTIHSCFGGANQDFVASGSEDGKVYIWHVKR-E---LPIATLSG--HTRTVSCVAWNPVYHQMIASV 578 (604)
Q Consensus 508 ~~--~~~~~~~-~~~i~~~~~~~~~~~l~sgs~dg~I~iwd~~~-~---~~~~~l~~--h~~~V~~v~~sp~~~~~l~s~ 578 (604)
.. ..+..+. ...+....-+.+|.++++--+.+.|..|+..+ . .....+.. .-..+..+.+.++ +.+.+..
T Consensus 263 ~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~-g~Lwv~s 341 (381)
T 3q6k_A 263 LNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSK-GGLWFMS 341 (381)
T ss_dssp CCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTT-SCEEEEE
T ss_pred hceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCC-CeEEEEE
Confidence 11 1222221 11222222135787788888889999999875 1 12233321 1235677888777 5555554
Q ss_pred e
Q psy10566 579 S 579 (604)
Q Consensus 579 s 579 (604)
+
T Consensus 342 n 342 (381)
T 3q6k_A 342 N 342 (381)
T ss_dssp C
T ss_pred C
Confidence 3
No 414
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=23.97 E-value=2.2e+02 Score=29.52 Aligned_cols=60 Identities=7% Similarity=0.085 Sum_probs=42.4
Q ss_pred eEEEEEEcCCCCEEEEEeCC------------CeEEEEEcCCCcccccccC--CCCeeEEEECCCCCEEEEEec
Q psy10566 433 RVNCLWCRSDGKSVLAADTH------------HRIRTYNFEHLTDSNLLQE--DHPVMSFTIDATDRLALLNVS 492 (604)
Q Consensus 433 ~v~~l~~s~~g~~l~~~~~d------------g~I~i~d~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~ 492 (604)
....++|.++|...++.+.. ..+..++..+++...+... ...++.++|+||++.|+++..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 46789999999877744321 2566667666665555432 457899999999999888754
No 415
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.55 E-value=5.4e+02 Score=24.98 Aligned_cols=180 Identities=9% Similarity=0.139 Sum_probs=93.0
Q ss_pred CcEEEEEEcCCCCeEE--EEEC-------------CCeEEEEEeCCCCceeEeeEEecc----CCCCeeEEEEC---CC-
Q psy10566 302 DEVWFCKFSPDGLKLA--TGSK-------------DTTVIIWDVDPVTFTCQHRKTLEG----HTLGVAYLAWS---PD- 358 (604)
Q Consensus 302 ~~V~~v~fspdg~~la--sgs~-------------dg~i~iwd~~~~~~~~~~~~~l~~----h~~~V~~l~~s---pd- 358 (604)
-.|..+...+++++=+ +|-. --.|.+||+.+...+......+.. ....+..+++. |+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 4677777777766322 2211 125888998832102222233321 13457777776 32
Q ss_pred --CCeEEEEeCCCceEEEEEECCCceEEEEecCCCCCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCeeeeeeceeEEE
Q psy10566 359 --SSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNC 436 (604)
Q Consensus 359 --~~~l~s~~~d~~~~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~v~~ 436 (604)
+..++..+..+..-|.|+|+.+++..+... . .|.|+....+ ..+| .... + ...+..
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~---~------~~~pd~~~~~--~i~G---------~~~~-~-~~Gi~g 224 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTH---P------TFKAERPTKF--DYGG---------KEYE-F-KAGIFG 224 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEEC---G------GGSCCSCEEE--EETT---------EEEE-E-CCCEEE
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEcc---C------CCccccCcce--EECC---------EEeE-e-ccCceE
Confidence 123333333222479999999998776542 1 1334311111 1112 1111 1 225778
Q ss_pred EEEcCC----CCEEEEEeCCC-eEEEEEc---CCC---cccccccCC---CCeeEEEEC-CCCCEEEEEecCCeEEEEec
Q psy10566 437 LWCRSD----GKSVLAADTHH-RIRTYNF---EHL---TDSNLLQED---HPVMSFTID-ATDRLALLNVSTQGVHLWDL 501 (604)
Q Consensus 437 l~~s~~----g~~l~~~~~dg-~I~i~d~---~~~---~~~~~~~~~---~~i~~~~~s-~~~~~l~~~~~dg~I~lwd~ 501 (604)
++++|+ ++.|......+ .+.-... +.. .....+... ......+++ .+|..+++--..+.|..|+.
T Consensus 225 IaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 225 ITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp EEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEET
T ss_pred EEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeC
Confidence 888887 67777665554 3333331 111 111222222 233456775 67777777778889999998
Q ss_pred CC
Q psy10566 502 RD 503 (604)
Q Consensus 502 ~~ 503 (604)
.+
T Consensus 305 ~~ 306 (381)
T 3q6k_A 305 QK 306 (381)
T ss_dssp TS
T ss_pred CC
Confidence 75
No 416
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=22.25 E-value=3.9e+02 Score=23.31 Aligned_cols=17 Identities=12% Similarity=0.137 Sum_probs=8.8
Q ss_pred HHHcCChHHHHHHHhhh
Q psy10566 128 HIMDGDWSKADHDLNDL 144 (604)
Q Consensus 128 ~i~~g~w~~~~~~l~~l 144 (604)
....|+|++|...+...
T Consensus 47 ~~~~~~~~~A~~~~~~a 63 (272)
T 3u4t_A 47 YYELAKYDLAQKDIETY 63 (272)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHH
Confidence 33455566555555533
No 417
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=21.74 E-value=2.5e+02 Score=20.81 Aligned_cols=98 Identities=10% Similarity=0.041 Sum_probs=51.7
Q ss_pred HHHHHHHHhhcChHHHHHHHHHHhCCccCChhHH--HHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHHH
Q psy10566 90 VRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAA--KFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKYL 167 (604)
Q Consensus 90 ~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~--~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l 167 (604)
..+-..++....|.+|...+++=....-+.+.+. .-.-....|+|++|...+...-................+-..-.
T Consensus 8 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 87 (131)
T 1elr_A 8 KELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGN 87 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHH
Confidence 3344446666778888888876544322222221 12334567999999998876533211100000000111222222
Q ss_pred HHHhcCChhHHHHHHHhhcC
Q psy10566 168 EYLEDGRVLDALHVLRNELT 187 (604)
Q Consensus 168 e~le~~~~~~Al~~l~~~l~ 187 (604)
-+...++..+|+..+++.+.
T Consensus 88 ~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 88 SYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHH
Confidence 23467889999999987543
No 418
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=21.02 E-value=85 Score=25.95 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=29.0
Q ss_pred chhhhHHHHHHHHHHHHHhcCChhHHHHHHHhh
Q psy10566 153 DLVEMKFLILEQKYLEYLEDGRVLDALHVLRNE 185 (604)
Q Consensus 153 ~~~~~~~~~~~~~~le~le~~~~~~Al~~l~~~ 185 (604)
.+..++|-++-+-||+|+..+ ..+|..++.+.
T Consensus 31 EL~~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f 62 (148)
T 2j49_A 31 ELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRF 62 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 466889999999999999999 99999999884
No 419
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=20.95 E-value=3.9e+02 Score=22.79 Aligned_cols=110 Identities=18% Similarity=0.092 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHH--HHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHHHHHHHH
Q psy10566 89 IVRLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKF--RQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFLILEQKY 166 (604)
Q Consensus 89 ~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l--~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 166 (604)
...+-..+++...|.+|...+++-....-+.+..... .-....|++++|+..+.+.-..- |.. . ... ..+-..+
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~-~-~a~-~~lg~~~ 83 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVART-PRY-L-GGY-MVLSEAY 83 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC-H-HHH-HHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCc-H-HHH-HHHHHHH
Confidence 4445555677778999999998876655544433222 33456899999999888653322 211 1 111 1111111
Q ss_pred HHH--------HhcCChhHHHHHHHhhcCCCCCChhhhhhhhhh
Q psy10566 167 LEY--------LEDGRVLDALHVLRNELTPLNHNTAKVHELSSF 202 (604)
Q Consensus 167 le~--------le~~~~~~Al~~l~~~l~p~~~~~~~~~~L~~l 202 (604)
... +..|+..+|+..+++-+.--+.+..-...|..+
T Consensus 84 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~ 127 (217)
T 2pl2_A 84 VALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLV 127 (217)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 111 112677888888888654333344434444433
No 420
>1sy9_B Cyclic-nucleotide-gated olfactory channel; helix-turn-helix, calcium-binding protein; NMR {Xenopus laevis}
Probab=20.88 E-value=38 Score=17.72 Aligned_cols=8 Identities=50% Similarity=0.862 Sum_probs=5.7
Q ss_pred HHHHHHHH
Q psy10566 7 DIVRLIGQ 14 (604)
Q Consensus 7 ~~~~~~~~ 14 (604)
-|+||+|-
T Consensus 9 ri~rlvgv 16 (26)
T 1sy9_B 9 RIARLVGV 16 (26)
T ss_pred HHHHHHHH
Confidence 47888774
No 421
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=20.84 E-value=3.7e+02 Score=29.83 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=37.6
Q ss_pred HHHHHHHhhcChHHHHHHHHHHhCCccCChhHHHHHHHHHc-------CChHHHHHHHhhhhhhcCCc
Q psy10566 91 RLIGQYLRTIGLDRTADLLMQESGCKLDHPSAAKFRQHIMD-------GDWSKADHDLNDLEYLLDSR 151 (604)
Q Consensus 91 ~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~~~~~l~~~i~~-------g~w~~~~~~l~~l~~~~~~~ 151 (604)
|++-.+++.+.|.+|.-.+ +|..+++.+.+.|.+ .+...++.++-..-..+.++
T Consensus 150 ~iv~~cl~hnae~~AvdLa-------lE~erLD~Le~~vd~~~~~~~~~n~~rvclYlls~v~~lv~p 210 (963)
T 4ady_A 150 RMIEKCLKASELKLALGIA-------LEGYRLDIIESALKSKLDQDSTSENVKIINYLLTLAITTVTN 210 (963)
T ss_dssp HHHHHHHHHTCHHHHHHHH-------HHTTCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHhCCCHHHHHHHH-------HHHhhHHHHHHHHHhhccccccccHHHHHHHHHHHhhccCCC
Confidence 3444578889999997555 446778888888876 67777887776665444433
No 422
>1reg_X T4 REGA; translational regulator protein; 1.90A {Enterobacteria phage T4} SCOP: d.58.27.1
Probab=20.69 E-value=92 Score=24.24 Aligned_cols=43 Identities=23% Similarity=0.050 Sum_probs=31.0
Q ss_pred chHHHHHH--HHHHHHHhcCCCCCCC----CCCCccccccccccccCcc
Q psy10566 4 TDEDIVRL--IGQYLRTIGLDGDSDD----GAPPPLKKSRASVQASGQE 46 (604)
Q Consensus 4 ~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 46 (604)
+++||.|- |.|.|++-||-...+. ..+|-..+|+-.-+.-|.|
T Consensus 64 s~eDi~Rrn~Ia~lL~~Wgli~iv~~~~~~~~~~~n~frVis~k~K~~W 112 (122)
T 1reg_X 64 TEEDEVRRDSIAWLLEDWGLIEIVPGQRTFMKDLTNNFRVISFKQKHEW 112 (122)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCEECSSCEECCCCCCSSCEECCTTTGGGS
T ss_pred CHHHHHHHHHHHHHHHhCCcEEEecCccccccCcccceEEEEeccccce
Confidence 68999995 9999999999888762 3555566666554444544
No 423
>3ct5_A Morphogenesis protein 1; cell WALL, hydrolase, infection, late protein; HET: NAG; 1.37A {Bacteriophage phi-29} PDB: 3csz_A* 3csr_A* 3ct0_A* 3ct1_A*
Probab=20.20 E-value=62 Score=27.17 Aligned_cols=32 Identities=22% Similarity=0.153 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHhhcChHHHHHH-----HHHHhCCcc
Q psy10566 86 DEDIVRLIGQYLRTIGLDRTADL-----LMQESGCKL 117 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g~~~s~~~-----L~~Es~~~~ 117 (604)
.++..+-|.+||...||...+.+ ++.|||+.-
T Consensus 14 ~~~~a~~i~~~l~~~G~s~~~aAGilGN~~~ESg~nP 50 (159)
T 3ct5_A 14 MKVNAQYILNYLSSNGWTKQAICGMLGNMQSESTINP 50 (159)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCc
Confidence 56678899999999999888766 999999644
No 424
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=20.12 E-value=4.1e+02 Score=22.74 Aligned_cols=106 Identities=8% Similarity=0.005 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHhCCccCCh---h--HHHHHHHHHcCChHHHHHHHhhhhhhcCCccchhhhHHH
Q psy10566 86 DEDIVRLIGQYLRTIGLDRTADLLMQESGCKLDHP---S--AAKFRQHIMDGDWSKADHDLNDLEYLLDSRGDLVEMKFL 160 (604)
Q Consensus 86 ~~e~~~lI~q~L~e~g~~~s~~~L~~Es~~~~~~~---~--~~~l~~~i~~g~w~~~~~~l~~l~~~~~~~~~~~~~~~~ 160 (604)
.+....+-..+++...|.+|...|++=....-+++ . ...-......|+|++|...+..+-...+.........|.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 44556667778888899999999987443222221 1 112234567899999999988764332222111122222
Q ss_pred HHHHHHHH---------------HHhcCChhHHHHHHHhhcCCCCCC
Q psy10566 161 ILEQKYLE---------------YLEDGRVLDALHVLRNELTPLNHN 192 (604)
Q Consensus 161 ~~~~~~le---------------~le~~~~~~Al~~l~~~l~p~~~~ 192 (604)
+ -..+.+ ..+.++..+|+..+++-+.-.+.+
T Consensus 84 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~ 129 (225)
T 2yhc_A 84 R-GLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS 129 (225)
T ss_dssp H-HHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTC
T ss_pred H-HHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC
Confidence 2 112221 123467788999999876544333
Done!