RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10566
(604 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 116 bits (290), Expect = 2e-29
Identities = 54/317 (17%), Positives = 111/317 (35%), Gaps = 35/317 (11%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
L+ H V F P + + S+D T+ +WD + T +TL+GHT V ++
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDIS 66
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
+ L + +LW + ++ H + +++S S +G V
Sbjct: 67 FDHSGKLLASCSADMTIKLWDFQGFE---CIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 123
Query: 415 QFYQCDIEG-QVLDSWEGVRVNCLWCR--SDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
+++ + ++ G R R DG + + +R + L+E
Sbjct: 124 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 183
Query: 472 DHPVMSFTIDATDRLALLNVSTQG---------------------VHLWDLRDRILLRKF 510
V+ A + G + +WD+ + L
Sbjct: 184 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243
Query: 511 QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPV 570
G + + F+ S ++D + +W K + + TL+ H V+ + ++
Sbjct: 244 VGHDNW---VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 299
Query: 571 YHQMIASVSDDCTVRIW 587
+ + S D TV++W
Sbjct: 300 TAPYVVTGSVDQTVKVW 316
Score = 59.8 bits (143), Expect = 2e-10
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 281 DHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR 340
H+ + E++ K G L +GS+D T+ +WDV T
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS----TGMCL 240
Query: 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCS 399
TL GH V + + +L D L VW+ + ++ H +TS
Sbjct: 241 MTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWDYKNKRCMKTLNAHE--HFVTSLD 296
Query: 400 WNRDGTKFVCGG 411
+++ V G
Sbjct: 297 FHKTAPYVVTGS 308
Score = 57.1 bits (136), Expect = 2e-09
Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 28/190 (14%)
Query: 291 CETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGV 350
+ H + V + + DG +A+ S D TV +W V T + + L H V
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA----TKECKAELREHRHVV 188
Query: 351 AYLAWSPDSSHLLVVGPEDCHELW------------------VWNIET-ELLRVKLNHSP 391
++W+P+SS+ + +W++ T L + H
Sbjct: 189 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD- 247
Query: 392 EDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEG--VRVNCLWCRSDGKSVLA 448
+ + ++ G + D + + + + V L V+
Sbjct: 248 -NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 449 ADTHHRIRTY 458
++ +
Sbjct: 307 GSVDQTVKVW 316
Score = 50.5 bits (119), Expect = 2e-07
Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 9/225 (4%)
Query: 376 WNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVR- 433
W H +T ++ + V D E G + +G
Sbjct: 3 WIPRPPEKYALSGHR--SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 434 -VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVS 492
V + GK + + I+ ++F+ + +S + +++ S
Sbjct: 61 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120
Query: 493 TQGVH-LWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELP 551
+W+++ ++ F G + + G +AS S D V +W V +
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG---TLIASCSNDQTVRVWVVATKEC 177
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKS 596
A L H V C++W P S + + G S
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 222
Score = 44.0 bits (102), Expect = 3e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ LN H V F + TGS D TV +W+
Sbjct: 283 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 111 bits (277), Expect = 2e-27
Identities = 47/346 (13%), Positives = 100/346 (28%), Gaps = 13/346 (3%)
Query: 246 RLQTLLSQAVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVW 305
L L +A L+ D +L ++ +D + T + L H +++
Sbjct: 3 ELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPV---GRIQMRTRRTLRGHLAKIY 59
Query: 306 FCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV 365
+ D L + S+D +IIWD +T + + V A++P +++
Sbjct: 60 AMHWGTDSRLLVSASQDGKLIIWDS----YTTNKVHAIPLRSSWVMTCAYAPSGNYVACG 115
Query: 366 GPED---CHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE 422
G ++ + L + R H+ S + + +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ 175
Query: 423 GQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE-DHPVMSFTID 481
+ V L D + ++ + ++ + + +
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235
Query: 482 ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV 541
S I S + + +G +D
Sbjct: 236 PNGNA-FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294
Query: 542 YIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+W + L+GH VSC+ +A+ S D ++IW
Sbjct: 295 NVWDALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339
Score = 63.2 bits (152), Expect = 2e-11
Identities = 41/253 (16%), Positives = 76/253 (30%), Gaps = 42/253 (16%)
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTS 397
+ R+TL GH + + W DS LLV +D + + T + S + +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTNKVHAIPLRSS--WVMT 102
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRT 457
C++ G CGG+ +++ + + + L +
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 162
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517
L D Q+ T D
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGD------------------------------------ 186
Query: 518 FTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIAS 577
+ S + SG+ D +W V+ + T +GH ++ + + P A+
Sbjct: 187 --VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFAT 243
Query: 578 VSDDCTVRIWGPH 590
SDD T R++
Sbjct: 244 GSDDATCRLFDLR 256
Score = 45.1 bits (105), Expect = 1e-05
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ VL H + V + DG+ +ATGS D+ + IW+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 107 bits (268), Expect = 5e-26
Identities = 61/325 (18%), Positives = 103/325 (31%), Gaps = 37/325 (11%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTF--------------TCQHRKTLE 344
DH V KFS DG LATG + T ++ V + + +
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 345 GHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDG 404
L + + +SPD L + +W ++ ++ + SL
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 405 TKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLT 464
+ + + S E DGK + A +R ++ E
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 465 DSNLLQEDH--------PVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516
L ++ V S + + + V LW+L++ + G
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 517 QF---------TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAW 567
+ S N +++ SGS+D V W K P+ L GH +V VA
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358
Query: 568 NPV-----YHQMIASVSDDCTVRIW 587
+ + A+ S DC RIW
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIW 383
Score = 68.7 bits (166), Expect = 5e-13
Identities = 54/297 (18%), Positives = 94/297 (31%), Gaps = 19/297 (6%)
Query: 271 ESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV 330
V+ L D ++ T + FSPDG LATG++D + IWD+
Sbjct: 91 SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI 150
Query: 331 D---PVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKL 387
+ V H + + + S V + + E +
Sbjct: 151 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTV 210
Query: 388 NHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVL 447
SP D + + D V G + + V + DG+SV+
Sbjct: 211 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270
Query: 448 AADTHHRIRTYNFEHLTDSNL-------------LQEDHPVMSFTIDATDRLALLNVSTQ 494
+ ++ +N ++ + + + V+S D L +
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 495 GVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA---NQDFVASGSEDGKVYIWHVKR 548
GV WD + L QG ++ G + + A+GS D K IW K+
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 55.6 bits (132), Expect = 8e-09
Identities = 25/227 (11%), Positives = 59/227 (25%), Gaps = 21/227 (9%)
Query: 258 QKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA 317
+ + + + + + L+ DG +A
Sbjct: 162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 221
Query: 318 TGSKDTTVIIWDVDPVTFTCQ---HRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELW 374
GS D V +WD + + ++ GH V + ++ D ++ + +LW
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 375 ---------VWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIE-GQ 424
+D + S + ++ + G D + G
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 425 VLDSWEG--------VRVNCLWCRSDGKSVLAADTHHRIRTYNFEHL 463
L +G N + + R + ++ +
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 30.5 bits (67), Expect = 0.56
Identities = 18/145 (12%), Positives = 43/145 (29%), Gaps = 22/145 (15%)
Query: 474 PVMSFTIDATDRLALLNVSTQG-VHLWDLRDRILLRKFQGVTQG-QFTIHSCFGGANQDF 531
P +D+ L T L++ + + + + ++
Sbjct: 17 PPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY 76
Query: 532 VASGSEDGKVYIWHVKRELPIATLSG------------------HTRTVSCVAWNPVYHQ 573
+A+G + ++ V +A LS + V ++P +
Sbjct: 77 LATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGK 134
Query: 574 MIASVSDDCTVRIWGPHLNTNKSPH 598
+A+ ++D +RIW
Sbjct: 135 FLATGAEDRLIRIWDIENRKIVMIL 159
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 98.0 bits (242), Expect = 7e-23
Identities = 56/298 (18%), Positives = 98/298 (32%), Gaps = 17/298 (5%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349
++ +VL H D V C G ++ +GS D T+ +W T + +TL GHT G
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGG 59
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVC 409
V + + + E S C +
Sbjct: 60 VWSSQMRDNIII------SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 410 GGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLL 469
GQ L G + DG+ V++ ++ ++ E T + L
Sbjct: 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 173
Query: 470 QEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
Q H +++ + + +WD+ + G +
Sbjct: 174 Q-GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-----KD 227
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + SG+ D V IW +K + TL G + S V + + SDD TV++W
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
Score = 49.4 bits (116), Expect = 5e-07
Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 4/100 (4%)
Query: 499 WDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGH 558
W + + +G + +C + + SGS+D + +W + TL GH
Sbjct: 1 WRRGELKSPKVLKGHDDH---VITCLQ-FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH 56
Query: 559 TRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
T V ++ H
Sbjct: 57 TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 96
Score = 39.4 bits (90), Expect = 8e-04
Identities = 15/99 (15%), Positives = 27/99 (27%), Gaps = 7/99 (7%)
Query: 289 FPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQH---RKTLEG 345
+ + + + + T S D TV +WD+ T G
Sbjct: 246 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK--TGEFIRNLVTLESGG 303
Query: 346 HTLGVAYLAWSPDSSHLLVVGPEDCHE--LWVWNIETEL 382
V + S V E L V + + ++
Sbjct: 304 SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 342
Score = 38.6 bits (88), Expect = 0.002
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 258 QKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA 317
++ V S ++ ++ + L T E T VW + S L A
Sbjct: 262 AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCA 321
Query: 318 TGSKDTT----VIIWDVD 331
GS++ T +++ D D
Sbjct: 322 VGSRNGTEETKLLVLDFD 339
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 96.6 bits (238), Expect = 1e-22
Identities = 38/297 (12%), Positives = 77/297 (25%), Gaps = 17/297 (5%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
E + ++ H + +P L +GS D ++ W + H+ +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS---------SMHQDHSNLIV 50
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L S + + + + E + + + + + D
Sbjct: 51 SLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
S V + V + +
Sbjct: 111 GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 170
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
+L Q + R K ++ + +D
Sbjct: 171 SPSETYIAAGDVMG-KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229
Query: 532 VASGSEDGKVYIWHVKR-ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
VA+GS D ++I+ VKR I L+ H V+ + W + S D ++ W
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRW 284
Score = 48.8 bits (114), Expect = 9e-07
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 281 DHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR 340
+ ++ F ++ E + + +ATGS DT + I+ V +
Sbjct: 195 EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR---PMKII 251
Query: 341 KTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
K L H GV L W S+ LV D + WN+
Sbjct: 252 KALNAHKDGVNNLLWETPST--LVSSGADAC-IKRWNV 286
Score = 46.1 bits (107), Expect = 6e-06
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 551 PIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
+ T+SGH + ++ + NP + S S D + W ++ H
Sbjct: 5 VLKTISGHNKGITALTVNP-----LISGSYDGRIMEW--SSSSMHQDH 45
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 96.8 bits (239), Expect = 1e-22
Identities = 32/292 (10%), Positives = 76/292 (26%), Gaps = 10/292 (3%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDV-DPVTFTCQHRKTLEGHTLGVAYLAWSP 357
+H + V S + TG V +WD+ P + + + P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 358 DSSHLLVVGP--EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQ 415
D L+V G + + +L ++ G
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 416 FYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPV 475
+ + +C+ +DG + + +R+++ +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 476 MSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASG 535
S T + + + V + + + + + S + S
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 536 SEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+D + W I + +V + + I + S D ++
Sbjct: 284 GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISV-DDKYIVTGSGDKKATVY 333
Score = 52.5 bits (124), Expect = 6e-08
Identities = 16/95 (16%), Positives = 25/95 (26%), Gaps = 7/95 (7%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
L+ H V KF+ G + KD + W
Sbjct: 248 VEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP----YGASIFQS 303
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
+ V S D + +V G D V+ +
Sbjct: 304 -KESSSVLSCDISVDDKY-IVTGSGDKK-ATVYEV 335
Score = 39.4 bits (90), Expect = 0.001
Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 3/88 (3%)
Query: 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
FQG + Q D + + I TL H V V +
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISN 61
Query: 570 VYHQMIASVSDDCTVRIWGPHLNTNKSP 597
+ + + V++W NKSP
Sbjct: 62 -PTRHVYTGGKG-CVKVWDISHPGNKSP 87
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 96.8 bits (239), Expect = 2e-22
Identities = 32/324 (9%), Positives = 81/324 (25%), Gaps = 28/324 (8%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
Q+ D + K P L S D ++ ++ D ++L + +
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCN 63
Query: 355 WSPDSSHLLVVGPEDCHEL--------WVWNIETELLRVKLNHSPEDSLTSCSWNRDGTK 406
+ ++ + VG L + + + +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDS 466
R + + V+ ++ ++ + +++ + D
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183
Query: 467 NLLQEDHP-----------------VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRK 509
N E+ +ID + + + R
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243
Query: 510 FQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNP 569
T + ++S F+ + DG + W+++ I + S V
Sbjct: 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIAC 302
Query: 570 VYHQMIASVSDDCTVRIWGPHLNT 593
++ + D T + T
Sbjct: 303 -SDNILCLATSDDTFKTNAAIDQT 325
Score = 44.1 bits (102), Expect = 3e-05
Identities = 14/121 (11%), Positives = 30/121 (24%), Gaps = 5/121 (4%)
Query: 260 YHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATG 319
E ++ + + V +FSP L T
Sbjct: 210 ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269
Query: 320 SKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379
D + W++ T + K + + + L + +D + +
Sbjct: 270 GSDGIISCWNLQ----TRKKIKNFAKFNEDSV-VKIACSDNILCLATSDDTFKTNAAIDQ 324
Query: 380 T 380
T
Sbjct: 325 T 325
Score = 42.9 bits (99), Expect = 7e-05
Identities = 6/50 (12%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 552 IATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPHLAS 601
+ +S + P ++ S D ++ ++ + L S
Sbjct: 4 VQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQS 52
Score = 34.4 bits (77), Expect = 0.031
Identities = 23/218 (10%), Positives = 55/218 (25%), Gaps = 15/218 (6%)
Query: 385 VKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ------VLDSWEGVRVNCL- 437
V++ +P+D ++ + + G + Q + + C
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 438 WCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVH 497
+ + + I + L + + L ++
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 498 LWDLRDR-----ILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552
+ + R ++ K + N + G + +V + +
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183
Query: 553 AT---LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
SG + VA P + A S D V +
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221
Score = 33.3 bits (74), Expect = 0.074
Identities = 7/48 (14%), Positives = 13/48 (27%), Gaps = 8/48 (16%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT 347
+E K + L + D T +T+E +
Sbjct: 291 KFNEDSVVKIACSDNILCLATSDDTFKTNAAID--------QTIELNA 330
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 92.4 bits (227), Expect = 3e-21
Identities = 37/296 (12%), Positives = 84/296 (28%), Gaps = 9/296 (3%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLA 354
QV H + S DG L + + + WD+ T R + H + +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS--TGISN-RVFPDVHATMITGIK 62
Query: 355 WSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
+ V + + + + N + + DG V +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANK-LSSQPLGLAVSADGDIAVAACYKH 121
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHP 474
+ + L +V D+ + + +++ +
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 181
Query: 475 VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVAS 534
+ S + ++ V + + + L T + + +A+
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 535 GSEDGKVYIWHVKRELPIATL---SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
GS D V +W++ + + + +V+ V W I S D ++ W
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFW 295
Score = 41.9 bits (96), Expect = 1e-04
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 284 CTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTL 343
F T H +V +SPD ++LATGS D +VI+W+++ +
Sbjct: 207 SVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN--KPSDHPIIIK 264
Query: 344 EGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
H + + + ++ G +D + + WN+
Sbjct: 265 GAHAMSSVNSVIWLNETTIVSAG-QDSN-IKFWNV 297
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 91.4 bits (225), Expect = 5e-21
Identities = 62/305 (20%), Positives = 106/305 (34%), Gaps = 27/305 (8%)
Query: 292 ETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ ++ V+ C D K+ +G +D T+ IWD + T + ++ L GHT V
Sbjct: 6 QRIHCRSETSKGVY-C-LQYDDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSVL 59
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L + +++ G D E+L ++H + T
Sbjct: 60 CLQYDE---RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 116
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
I + + G R D K +++A I+ +N L
Sbjct: 117 IAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN- 175
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
H + DRL + S + LWD+ LR +G + I
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN-----KR 230
Query: 532 VASGSEDGKVYIWHVKR---------ELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDC 582
+ SG+ DGK+ +W + L + TL H+ V + ++ I S S D
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDD 287
Query: 583 TVRIW 587
T+ IW
Sbjct: 288 TILIW 292
Score = 36.7 bits (83), Expect = 0.006
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWD 329
+ L +H V+ +F D ++ + S D T++IWD
Sbjct: 261 RTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 81.1 bits (198), Expect = 4e-17
Identities = 41/358 (11%), Positives = 76/358 (21%), Gaps = 77/358 (21%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
+ + ++ D ++A + V I++ L+ H V + W+PDS
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQC 419
+ ++ G + +W T + + W + KF G C
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISIC 122
Query: 420 DIEGQ----------------VLDSWEGVRVNCLWCRSDGKSVLAADT----------HH 453
E + VL L S
Sbjct: 123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT 182
Query: 454 RIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGV 513
+ V A V L D ++ +
Sbjct: 183 PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 242
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSG---------------- 557
T + VA+G D ++ + G
Sbjct: 243 TLPLLAVTFITES---SLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTAR 298
Query: 558 -------------------------HTRTVSCVAWNPVYH---QMIASVSDDCTVRIW 587
H +VS ++ + D + IW
Sbjct: 299 ERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 59.5 bits (142), Expect = 4e-10
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 528 NQDFVASGSEDGKVYIWHV--KRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
++ +A + +V+I+ + + + L H V+ V W P I + D
Sbjct: 18 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAY 76
Query: 586 IWGPHLNTNKSPH 598
+W T K
Sbjct: 77 VWTLKGRTWKPTL 89
Score = 34.1 bits (76), Expect = 0.043
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
A S +SC AWN IA ++ V I+
Sbjct: 1 AYHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIY 34
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 78.4 bits (191), Expect = 2e-16
Identities = 39/295 (13%), Positives = 76/295 (25%), Gaps = 23/295 (7%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
+P G K+ + T+V V + + H+ SP + G
Sbjct: 25 NTPAGDKIQYCN-GTSVYTVPVG----SLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDV 78
Query: 369 DCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDS 428
+ +T + + SW+ + + G + + S
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 429 WEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDH-------PVMSFTID 481
+ S N + + + V S +
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198
Query: 482 ATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGA----NQDFVASGSE 537
L + L++ D F+ + G + +AS S
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 258
Query: 538 DGKVYIWHVKRELPIATLSGHTR---TVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
D + IW+V T+ TR + W Q + S+S + + P
Sbjct: 259 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK---QALVSISANGFINFVNP 310
Score = 46.8 bits (109), Expect = 4e-06
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHT-L 348
+ + H V+ +SPDG K+A+ S D T+ IW+V T + KT+ T +
Sbjct: 227 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA----TLKVEKTIPVGTRI 282
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIE 379
L L+ + + N E
Sbjct: 283 EDQQLGIIWTKQALVSIS--ANGFINFVNPE 311
Score = 44.9 bits (104), Expect = 2e-05
Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
D + + VY V + H+ + +P AS VRIW
Sbjct: 30 DKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDT 87
Query: 590 HLNTNKSPH 598
T+
Sbjct: 88 TQTTHILKT 96
Score = 41.0 bits (94), Expect = 2e-04
Identities = 22/248 (8%), Positives = 50/248 (20%), Gaps = 18/248 (7%)
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
L +P + ++ + + + HS T + G G
Sbjct: 23 LGNTPAGDKIQYCNGTS---VYTVPVGSLTDTEIYTEHS--HQTTVAKTSPSGYYCASGD 77
Query: 412 IRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
+ G D + V + +
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT 137
Query: 472 DHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF 531
+ ++ A + + + + + + + + +
Sbjct: 138 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRY 197
Query: 532 VASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH------------QMIASVS 579
GS + N + IAS S
Sbjct: 198 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 257
Query: 580 DDCTVRIW 587
D T++IW
Sbjct: 258 ADKTIKIW 265
Score = 31.0 bits (68), Expect = 0.33
Identities = 10/105 (9%), Positives = 27/105 (25%), Gaps = 5/105 (4%)
Query: 488 LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKV--YIWH 545
+ + V+ + + + + + ASG G V +
Sbjct: 32 IQYCNGTSVYTVPVGSLTDTEIYTEHSH---QTTVAKTSPSGYYCASGDVHGNVRIWDTT 88
Query: 546 VKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590
+ T+ + V ++W+ ++ A
Sbjct: 89 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 133
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 78.4 bits (191), Expect = 2e-16
Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 22/300 (7%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGH-TLGVAYLAWSPDSSHLLVVGP 367
+ P +A + + +D GH + V + +SP +
Sbjct: 25 YDPTTNAIAYPCGK-SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG 83
Query: 368 EDCHELWVWNIETELLRVKLNHSP-------EDSLTSCSWNRDGTKFVCGG------IRG 414
++ ++ VW + + + ++ SW+ +G + G
Sbjct: 84 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHP 474
+ + C +S + + Y S + H
Sbjct: 144 ISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK 203
Query: 475 VMSFTIDAT-----DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
SF D + S + + +D + L+ + + +
Sbjct: 204 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDS 263
Query: 530 DFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH--QMIASVSDDCTVRIW 587
A+ D + +W V + + + + V I S+S D T+ +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
Score = 71.1 bits (172), Expect = 5e-14
Identities = 27/272 (9%), Positives = 64/272 (23%), Gaps = 17/272 (6%)
Query: 292 ETTQVLNDHCDEVWFCKFSP--DGLKLATGSKDTTVIIWDVD----PVTFTCQHRKTLEG 345
Q V KFSP L +G + VI+W + + +
Sbjct: 54 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQV 113
Query: 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT 405
++ ++W + L VVG + + ++ +++ +
Sbjct: 114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 173
Query: 406 KFVCGGIRGQFYQCDIEGQVL-----------DSWEGVRVNCLWCRSDGKSVLAADTHHR 454
+ + G G V +
Sbjct: 174 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF 233
Query: 455 IRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVT 514
+ + + + + + +WD+ ++K+
Sbjct: 234 DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293
Query: 515 QGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546
Q + S S DG + + +
Sbjct: 294 QQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 48.8 bits (114), Expect = 8e-07
Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 3/97 (3%)
Query: 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK 341
K + + + F D K AT D T+ +WDV T C +
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT--TSKCVQKW 289
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNI 378
TL+ LG + + ++ D L + +
Sbjct: 290 TLDKQQLGNQQVGVVATGNGRIISLSLDGT-LNFYEL 325
Score = 38.4 bits (87), Expect = 0.002
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 514 TQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV--KRELPIATLSGH-TRTVSCVAWNPV 570
TQ FT H + + V + P+ +GH + V+ V ++P+
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 571 Y-HQMIASVSDDCTVRIWGPH 590
Q + S + V +WG
Sbjct: 75 KGSQYLCSGDESGKVIVWGWT 95
Score = 33.4 bits (74), Expect = 0.072
Identities = 21/259 (8%), Positives = 59/259 (22%), Gaps = 21/259 (8%)
Query: 350 VAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSC---SWNRDGTK 406
+L++ P ++ + + + + ++++ V S+ + S +
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 407 FVCGGIRGQFYQCDIEGQVLDSWEGV-----------RVNCLWCRSDGKSVLAADTHHRI 455
G G+ + V ++ + +G+ +
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 139
Query: 456 RTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVST-------QGVHLWDLRDRILLR 508
+ ++L + + + T + R
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 199
Query: 509 KFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568
+ + L A +
Sbjct: 200 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALS 259
Query: 569 PVYHQMIASVSDDCTVRIW 587
+ Q A+V D T+R+W
Sbjct: 260 WLDSQKFATVGADATIRVW 278
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 71.4 bits (173), Expect = 6e-14
Identities = 26/309 (8%), Positives = 71/309 (22%), Gaps = 29/309 (9%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDS 359
+ + + D + D T + E + V + +
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF---EENLGNVFAMGVDRNG 97
Query: 360 SHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWN-------RDGTKFVCGGI 412
+V + + + T + G +
Sbjct: 98 KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 157
Query: 413 RGQFYQCDIEGQVLDSWEGVR--VNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
+ D+EG+ + + +D K++ + + L S +
Sbjct: 158 MQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 217
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRI------------LLRKFQGVTQGQF 518
V+ + + L+ S + + R +
Sbjct: 218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277
Query: 519 TIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASV 578
G + E G + + VK ++ ++ + + + +
Sbjct: 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSA-DRKTVMVR 332
Query: 579 SDDCTVRIW 587
DD + +
Sbjct: 333 KDDGKIYTF 341
Score = 70.7 bits (171), Expect = 1e-13
Identities = 29/302 (9%), Positives = 56/302 (18%), Gaps = 31/302 (10%)
Query: 309 FSP-DGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367
FSP DG +A S+ I DV L + Y+ D+ + G
Sbjct: 10 FSPLDGDLIAFVSRGQ-AFIQDVS------GTYVLKVPEPLRIRYVRRGGDTKVAFIHGT 62
Query: 368 EDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427
+ L +++ T + N + +
Sbjct: 63 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 122
Query: 428 -----------SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVM 476
+ + I Y+ E E+
Sbjct: 123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDY 182
Query: 477 SFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-----------GVTQGQFTIHSCFG 525
+ DA + D + + S
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 526 GANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
A + + + I L S + +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA-AYYQGAPEKGVLL 301
Query: 586 IW 587
+
Sbjct: 302 KY 303
Score = 41.4 bits (95), Expect = 2e-04
Identities = 4/38 (10%), Positives = 15/38 (39%)
Query: 294 TQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVD 331
T+ + + + + + S D + D + + ++
Sbjct: 307 TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLE 344
Score = 35.6 bits (80), Expect = 0.014
Identities = 23/206 (11%), Positives = 56/206 (27%), Gaps = 13/206 (6%)
Query: 403 DGTKFVCGGIRGQFYQCDIE-GQVLDSWEGVRVNCLWCRSDGKSVLAA--DTHHRIRTYN 459
DG RGQ + D+ VL E +R+ + D K + Y+
Sbjct: 14 DGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 460 FEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQ-------G 512
+ + V + +D + A++ + DL +
Sbjct: 73 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 132
Query: 513 VTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH 572
T + +G + G ++++ ++ A + ++ +
Sbjct: 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAP--AFDADS 190
Query: 573 QMIASVSDDCTVRIWGPHLNTNKSPH 598
+ + +S +
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEV 216
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 70.7 bits (171), Expect = 8e-14
Identities = 40/358 (11%), Positives = 81/358 (22%), Gaps = 70/358 (19%)
Query: 290 PCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLG 349
P TT L H V C + + TG+ D + ++D + L GH G
Sbjct: 3 PQRTT--LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGG 55
Query: 350 VAYLAWSPDSSHLLVVGPEDCHE------------------------------------- 372
V L + L+ +
Sbjct: 56 VWALKY-AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 114
Query: 373 -----LWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLD 427
L VW + E + L + + + +
Sbjct: 115 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 174
Query: 428 SWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLA 487
+ L + H R Y+ + + + I +
Sbjct: 175 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 234
Query: 488 LLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ-----------------D 530
L+ L L G + + D
Sbjct: 235 LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD 294
Query: 531 FVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ + + I++++ +L A + + V + ++A+V D +
Sbjct: 295 NILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 350
Score = 48.4 bits (113), Expect = 1e-06
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 528 NQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
++V +G++D + ++ + + LSGH V + + ++ S S D TVR+W
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--GGILVSGSTDRTVRVW 79
Query: 588 GPH 590
Sbjct: 80 DIK 82
Score = 42.2 bits (97), Expect = 1e-04
Identities = 14/121 (11%), Positives = 33/121 (27%), Gaps = 7/121 (5%)
Query: 258 QKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLA 317
+ H VS D + + + H + F L
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 298
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHE-LWVW 376
+GS + I+++ + H + + + + L+ +D L +
Sbjct: 299 SGS-ENQFNIYNLR--SGKLVH-ANILKDADQIWSVNFKGK--TLVAAVEKDGQSFLEIL 352
Query: 377 N 377
+
Sbjct: 353 D 353
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 62.4 bits (150), Expect = 4e-11
Identities = 27/324 (8%), Positives = 66/324 (20%), Gaps = 54/324 (16%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPE 368
+ + + + DV + T + G +PD+ V+
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVA--SDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 369 DCHELWVWNIETELLRVKLNHSPEDSLTS-----CSWNRDGTKFVCGG------------ 411
+++ +++T N S + + DG +
Sbjct: 61 Y-GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 119
Query: 412 -------IRGQFYQCDIEGQVLDSWEGVRV---------------NCLWCRSDGKSVLAA 449
+ V + GK +A
Sbjct: 120 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVAL 179
Query: 450 DTHHRIRTYNFEHLTDSNLLQED------HPVMSFTIDATDRLALLNVSTQGVHLWDLRD 503
+ R + + G DL+
Sbjct: 180 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 239
Query: 504 RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVS 563
+ + G ++ + +K+ I + T
Sbjct: 240 GKTHTQEF--ADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYY 295
Query: 564 CVAWNPVYHQMIASVSDDCTVRIW 587
CVA++ + + ++
Sbjct: 296 CVAFDKK-GDKLYLGGTFNDLAVF 318
Score = 60.1 bits (144), Expect = 2e-10
Identities = 31/303 (10%), Positives = 65/303 (21%), Gaps = 50/303 (16%)
Query: 299 DHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDP--VTFTCQHRKTLEGHTLGVAYLAW 355
+PD + + D+D TF + A
Sbjct: 37 PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT-SCSWNRDGTKFVCGGIRG 414
SPD + + ++ L V ++ + G
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 415 QFYQCDIEGQVLDSWEGVRVNCLWCRS--------------------------------- 441
Y + +D G L R+
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 216
Query: 442 --DGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDA-TDRLALLNVSTQGVHL 498
D + AD + + + + D + FT + +
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAK 276
Query: 499 WDLRDRILLRKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555
+DL+ R L++ F D + G + +++ + +
Sbjct: 277 YDLKQRKLIKAANLDHTYYCVAFD-------KKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Query: 556 SGH 558
Sbjct: 330 KLP 332
Score = 39.7 bits (91), Expect = 8e-04
Identities = 9/53 (16%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVA 351
+ + F G KL G + +++ D T L G +
Sbjct: 289 NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD--TLEKVKNIKLPGGDMSTT 339
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 62.2 bits (149), Expect = 6e-11
Identities = 38/357 (10%), Positives = 84/357 (23%), Gaps = 65/357 (18%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDP--VTFTCQHRKTLEGHTLGV 350
T H +++ + S D + +WD + H G+
Sbjct: 6 TANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 351 AYLAWSPDSS------HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLT-------- 396
++ L+ +L + I E K+ D L
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFS-GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122
Query: 397 -SCSWNRDG-----TKFVCGGIRGQFYQCDIEGQVLDSWE-------------------- 430
+ W + V ++G Y +S
Sbjct: 123 WALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 182
Query: 431 -GVRVNCLWCRSDGKSVLAAD------THHRIRTYNFEHLTDSNLLQEDHPVMSFTIDAT 483
+ G + + + + +++ + + S
Sbjct: 183 PSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 484 DRLALLNVSTQGVHLWDLRD-------------RILLRKFQGVTQGQFTIHSCFGGANQD 530
L + + L + + G + S + +
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 531 FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIW 587
+ S DGK+ W VK + I TL+ H + + S+++ +
Sbjct: 303 TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVK 359
Score = 41.8 bits (96), Expect = 2e-04
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 9/59 (15%)
Query: 540 KVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
KV+I H + V+ S S D +++W L N++P
Sbjct: 1 KVFIATA------NAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPK 50
Score = 36.0 bits (81), Expect = 0.012
Identities = 16/178 (8%), Positives = 49/178 (27%), Gaps = 26/178 (14%)
Query: 437 LWCRSDGKSVLAADTHHR--IRTYNFEHLTDSNLLQEDHP----VMSFTIDATDRLALLN 490
+W + D + + H+ ++ D V + + +
Sbjct: 38 VWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT 97
Query: 491 VSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIW------ 544
+ + + +L + + + + + G YIW
Sbjct: 98 REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 157
Query: 545 ------------HVKRELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPH 590
++ + + + ++ + V + +IA+ ++ TV+I
Sbjct: 158 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE--RGLIATGFNNGTVQISELS 213
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 61.4 bits (147), Expect = 8e-11
Identities = 24/312 (7%), Positives = 62/312 (19%), Gaps = 49/312 (15%)
Query: 316 LATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWV 375
+ ++ +++ D + T+ +P + L
Sbjct: 4 ILAPARPDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-ESLVK 60
Query: 376 WNIET----ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQ------- 424
++ T + + SL + + DG + E Q
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 425 -------VLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMS 477
++ L DG + + L + +Q
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180
Query: 478 FTIDAT----------------------DRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ 515
D A G+ DL +
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET----GEMAMREV 236
Query: 516 GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYHQMI 575
+ N + + + +++ I + + V + +
Sbjct: 237 RIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVST-DGSTV 294
Query: 576 ASVSDDCTVRIW 587
+ +
Sbjct: 295 WLGGALGDLAAY 306
Score = 55.6 bits (132), Expect = 6e-09
Identities = 37/312 (11%), Positives = 76/312 (24%), Gaps = 44/312 (14%)
Query: 297 LNDHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAY-LA 354
+ D +P G AT +K +++ D+ + + + + A
Sbjct: 29 IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88
Query: 355 WSPDSSHLLVVGPEDCHELWV--------WNIETELLRVKLNHSPEDSLTSCSWNRDGTK 406
SPD L + EL + E L + +T +W RDG+K
Sbjct: 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148
Query: 407 FVCGGIRGQFYQCDIEGQV------------------------LDSWEGVRVNCLWCRSD 442
G + V +S + R D
Sbjct: 149 LYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD 208
Query: 443 GKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLR 502
+ T + E + V F+ + + +DL
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLE 268
Query: 503 DRILLRKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHT 559
+++ + + V G G + + + +
Sbjct: 269 KNASIKRVPLPHSYYSVNVS-------TDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321
Query: 560 RTVSCVAWNPVY 571
+A ++
Sbjct: 322 NASMSLASVRLF 333
Score = 40.6 bits (93), Expect = 4e-04
Identities = 7/60 (11%), Positives = 16/60 (26%)
Query: 299 DHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPD 358
+ S DG + G + +D + + Q + ++ D
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
Score = 38.6 bits (88), Expect = 0.002
Identities = 6/61 (9%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 529 QDFVASGSEDGKVYIWHVKRELPIATL--SGHTRTVSCVAWNPVYHQMIASVSDDCTVRI 586
+D++ + + K+ + ++ + + T P A+V+ ++
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 587 W 587
Sbjct: 61 I 61
Score = 35.6 bits (80), Expect = 0.014
Identities = 8/108 (7%), Positives = 28/108 (25%), Gaps = 5/108 (4%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATL 555
+ + D + + G + + A+ ++ + + + +
Sbjct: 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI 72
Query: 556 SGHT-----RTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKSPH 598
T +++ A +P + S T + +
Sbjct: 73 DLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 59.1 bits (141), Expect = 4e-10
Identities = 25/290 (8%), Positives = 73/290 (25%), Gaps = 16/290 (5%)
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377
S+ + + DV + + T+ + SPD + + V +++ + +
Sbjct: 7 ANSESDNISVIDVT----SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHS-NDVSIID 60
Query: 378 IETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVR-VNC 436
T + + + S + V + + +
Sbjct: 61 TATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLG 120
Query: 437 LWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGV 496
L DGK + + + + D + + +
Sbjct: 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180
Query: 497 HLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKREL-PIATL 555
+ + + + + + +V + + A +
Sbjct: 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240
Query: 556 SGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP-------HLNTNKSPH 598
+ +A P ++ ++S TV + + K+P+
Sbjct: 241 PVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPY 289
Score = 31.8 bits (70), Expect = 0.19
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 299 DHCDEVWFCKFSPDGLKL-ATGSKDTTVIIWDVD 331
+ +PDG K+ S TV + D
Sbjct: 241 PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 58.1 bits (139), Expect = 9e-10
Identities = 25/289 (8%), Positives = 57/289 (19%), Gaps = 41/289 (14%)
Query: 292 ETTQVLNDHCDEVWFCK---FSPD---GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEG 345
+ + + G +L + + +D V+ E
Sbjct: 59 DHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKK----MLSEI 114
Query: 346 HTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGT 405
T A + P E L V + + + +
Sbjct: 115 DT--AACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNAS 172
Query: 406 KF----VCGGIRGQFYQCDIEG---QVLDSWEG--VRVNCLWCRSDGKSVLAADTHHRIR 456
++ + G D G W R G A
Sbjct: 173 RYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRY 232
Query: 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQG 516
TD + D ++ + ++ ++ + + +
Sbjct: 233 YVLMHKGTDGS-----------HKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVSIQ-- 279
Query: 517 QFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCV 565
+ F + V + + T S +
Sbjct: 280 -VS-----EDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
Score = 48.8 bits (115), Expect = 8e-07
Identities = 28/282 (9%), Positives = 58/282 (20%), Gaps = 52/282 (18%)
Query: 327 IWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVG--------PEDCHELWVWNI 378
++D D + ++G A +PD +V + + +
Sbjct: 2 VYDAD----AKKLLGQIDGGF--GPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDN 55
Query: 379 ETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLW 438
T ++ + + G+ +
Sbjct: 56 TTLDHAGEIVIP-----AKHAQHVPSPYNTAFSADGKRL--------------------Y 90
Query: 439 CRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHL 498
+ + + E T + DR L S + + +
Sbjct: 91 VANITPAASVTVIDAVSKKMLSEIDT--------AACVLAYPAGDDRFTALCESGKALTV 142
Query: 499 WDLRDRILLRKFQGVTQGQFTIHSCF--GGANQDFVASGSEDGKVYIWHVK--RELPIAT 554
+ ++ F + + G V +
Sbjct: 143 TLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKP 202
Query: 555 LSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGPHLNTNKS 596
S T W P Q A V H T+ S
Sbjct: 203 WSLLTDAERAEGWRPGGMQQTA-VQAKQNRYYVLMHKGTDGS 243
Score = 35.7 bits (81), Expect = 0.011
Identities = 7/110 (6%), Positives = 26/110 (23%), Gaps = 6/110 (5%)
Query: 496 VHLWDLRDRILLRKFQGVTQGQFTI---HSCFGGANQDFVASGSEDGKVYIWHVKRELPI 552
V + D + + + ++ A+ + + + +
Sbjct: 50 VEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKK 109
Query: 553 ATLSGHTRTVSCVAWNPVYHQMIASVSDDC-TVRIWGPHLNTNKSPHLAS 601
T +CV P ++ + + + ++
Sbjct: 110 ML--SEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSD 157
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 54.8 bits (130), Expect = 1e-08
Identities = 32/327 (9%), Positives = 74/327 (22%), Gaps = 55/327 (16%)
Query: 309 FSPDGLKL-----ATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLL 363
+PD ++ A + T + D + + ++G + + D S +
Sbjct: 9 PAPDARRVYVNDPAHFAAVTQQFVIDGE----AGRVIGMIDGGF--LPNPVVADDGSFIA 62
Query: 364 VVGPEDCH--------ELWVWNIETELLRVKLNHSPEDSLTS------------------ 397
+ V++ T L +
Sbjct: 63 HASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLF 122
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHH-RIR 456
++ V F + + DG A
Sbjct: 123 YQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 182
Query: 457 TYNFEHLTDSNLLQEDHPVMS------FTIDATDRLALLNVSTQGVHLWDLRD------- 503
+ E + +HP S T ++ +++S+ +
Sbjct: 183 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 242
Query: 504 --RILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRT 561
+Q V + +D + V + K +A
Sbjct: 243 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HE 301
Query: 562 VSCVAWNPV-YHQMIASVSDDCTVRIW 587
+ + + + A + D T+ I
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKTLYIH 328
Score = 50.2 bits (118), Expect = 3e-07
Identities = 35/305 (11%), Positives = 72/305 (23%), Gaps = 49/305 (16%)
Query: 309 FSPDGLKLAT----------GSKDTTVIIWDVDPVTFTC---QHRKTLEGHTLGVAYLAW 355
+ DG +A G + V ++D + T +
Sbjct: 54 VADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 113
Query: 356 SPDSSHLLVVGPEDCHELWVWNIETELLRVKLNH------SPEDSLTSCSWNRDGTKFVC 409
+PD LL + V ++E + + L+ P T RDG+
Sbjct: 114 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV 173
Query: 410 GGIRGQFYQC--------------------DIEGQVLDSWEGVRVNCLWCRSDGKSVLAA 449
+ G+++ +++ + S L A
Sbjct: 174 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
Query: 450 DTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQG--VHLWDLRDRILL 507
H + D+ T V + D + L
Sbjct: 234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 293
Query: 508 RKF---QGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSC 564
KF + + A + D +YI + + +++
Sbjct: 294 AKFEMGHEIDSINVS-----QDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQV 348
Query: 565 VAWNP 569
+
Sbjct: 349 ITTAD 353
Score = 37.1 bits (84), Expect = 0.005
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 299 DHCDEVWFCKFSPDG--LKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWS 356
+ E+ S D L A + D T+ I D + + + +++ G + +
Sbjct: 297 EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE----SGEELRSVNQLGHGPQVITTA 352
Query: 357 PD 358
Sbjct: 353 DM 354
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 53.3 bits (127), Expect = 4e-08
Identities = 33/304 (10%), Positives = 76/304 (25%), Gaps = 28/304 (9%)
Query: 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSS 360
V + S G L +D V + D+ T K +
Sbjct: 62 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDK 121
Query: 361 HLLVVGPEDCHELWVWNIET-ELLRVKLNH---------SPEDSLTSCSWNRDGTKFVC- 409
+ + + + ET E +++ PE + + + +F+
Sbjct: 122 YAIAGAYWPPQ-YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 180
Query: 410 ----GGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTH-HRIRTYNFEHLT 464
G I Y + + ++ + + A +++ + +
Sbjct: 181 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 240
Query: 465 DSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCF 524
+ A H+ D ++ +G + I F
Sbjct: 241 LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 300
Query: 525 GGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWNPVYH-QMIASVSDDCT 583
+ + Y++ ATL+ VA V+ + + D
Sbjct: 301 PALGGGSLFIKTHPNSQYLYVD------ATLNPEAEISGSVA---VFDIKAMTGDGSDPE 351
Query: 584 VRIW 587
+
Sbjct: 352 FKTL 355
Score = 44.4 bits (104), Expect = 3e-05
Identities = 39/294 (13%), Positives = 83/294 (28%), Gaps = 40/294 (13%)
Query: 310 SPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPED 369
+ L T + + D T+ + L+ V S +L V+G +
Sbjct: 29 DLENLFSVTLRDAGQIALIDGS--TYEIK--TVLDTGY-AVHISRLSASGRYLFVIGRDG 83
Query: 370 CHELWVWNIE--TELLRVKLNHSPEDSLTSCSWNRDGTK-FVCGGIRGQFYQCDIEGQVL 426
+ ++ T + +K+ TS + Q+ D
Sbjct: 84 KVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD-----G 138
Query: 427 DSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRL 486
++ E ++ + G + + H R + L P + T +
Sbjct: 139 ETLEPKKIQ----STRGMTYDEQEYHPEPRVA-------AILASHYRPEFIVNVKETGK- 186
Query: 487 ALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGKVYIWHV 546
+ L D D L+ + +F G+++ F+ + + K+ +
Sbjct: 187 ---------ILLVDYTDLNNLKTTEISA-ERFLHDGGLDGSHRYFITAANARNKLVVIDT 236
Query: 547 KRELPIATLSGHTRTVSCVAWNPVYH-----QMIASVSDDCTVRIWGPHLNTNK 595
K +A +T H S D +V + G +
Sbjct: 237 KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHP 290
Score = 28.6 bits (63), Expect = 2.7
Identities = 4/56 (7%), Positives = 11/56 (19%), Gaps = 7/56 (12%)
Query: 309 FSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLV 364
D + D + + V ++ D + +
Sbjct: 336 AVFDIKAMTGDGSDPEFKTLPI-------AEWAGITEGQPRVVQGEFNKDGTEVWF 384
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 51.9 bits (123), Expect = 1e-07
Identities = 27/293 (9%), Positives = 63/293 (21%), Gaps = 24/293 (8%)
Query: 302 DEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHR-KTLEGHTLGVAYLAWSPDSS 360
V + S G L +D + + D+ T K + +
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDR 121
Query: 361 HLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRGQFYQCD 420
+ + + + ET + ++ D +
Sbjct: 122 YTIAGAYWPPQ-FAIMDGETLEPKQIVSTRGM--------TVDTQTYHPEPRVAAIIASH 172
Query: 421 IEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTI 480
+ + + + L D ++ + + +
Sbjct: 173 EHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVA 232
Query: 481 DATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDFVASGSEDGK 540
+ + V R F G S G + + + ++
Sbjct: 233 VIDSK-DRRLSALVDVGKTPHPGRGA--NFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP 289
Query: 541 VYIWHVKRELPIATLSGHTRTVSCVAWNP------VYHQMIASVSDDCTVRIW 587
Y W EL G + +P V +V ++
Sbjct: 290 QYAWKKVAELQ-----GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 337
Score = 32.6 bits (73), Expect = 0.12
Identities = 16/142 (11%), Positives = 34/142 (23%), Gaps = 15/142 (10%)
Query: 254 AVDLQKYHCPYHNTKVDESLENVSLLVDHLCTKEEFPCETTQVLNDHCDEVWFCKFSPDG 313
+ + ++SL+ ++ + L F K P
Sbjct: 256 GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS 315
Query: 314 LKLA-------TGSKDTTVIIWDVD--PVTFTCQHRKTLEGHTLG---VAYLAWSPDSSH 361
L +V ++D+ + G V ++
Sbjct: 316 SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDE 375
Query: 362 LLVV---GPEDCHELWVWNIET 380
+ G D L V + +T
Sbjct: 376 VWFSVWNGKNDSSALVVVDDKT 397
Score = 29.5 bits (65), Expect = 1.2
Identities = 28/241 (11%), Positives = 69/241 (28%), Gaps = 30/241 (12%)
Query: 353 LAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPEDSLTSCSWNRDGTKFVCG 410
D +L V D ++ + + ++ + + ++ S S G +
Sbjct: 24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMS----ASGRYLLVI 79
Query: 411 GIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQ 470
G + D+ + E +V + + + F+ D +
Sbjct: 80 GRDARIDMIDL-----WAKEPTKV---------AEIKIGIEARSVESSKFKGYEDRYTIA 125
Query: 471 EDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQD 530
+ F I + L + + D Q + +
Sbjct: 126 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDT---------QTYHPEPRVAAIIASHEHPE 176
Query: 531 FVASGSEDGKVYIWHVK-RELPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVRIWGP 589
F+ + E GKV + + K + T G ++ W+ + + + ++ V +
Sbjct: 177 FIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDS 236
Query: 590 H 590
Sbjct: 237 K 237
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 49.4 bits (116), Expect = 6e-07
Identities = 26/305 (8%), Positives = 72/305 (23%), Gaps = 29/305 (9%)
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCH-ELWVW 376
+ + +W+++ + V + SPD +L V + +
Sbjct: 9 ASPESQQIHVWNLN--HEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
Query: 377 NIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG------IRGQFYQCDIEGQVLDSWE 430
+ L + SLT S + G G + G V
Sbjct: 67 APDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 126
Query: 431 GVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLN 490
+ D +++ + Q+ V + +
Sbjct: 127 LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP 186
Query: 491 VSTQGVHLWDLRDRILLRKFQ-----------------GVTQGQFTIHSCFGGANQDFVA 533
+ +L + + + + + ++ + A
Sbjct: 187 NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 246
Query: 534 SGSEDGKVYIWHVKRELPIATLSGHTRTVSC---VAWNPVYHQMIASVSDDCTVRIWGPH 590
+ ++ V + + + G T + + +IA+ + ++
Sbjct: 247 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306
Query: 591 LNTNK 595
Sbjct: 307 GEQGL 311
Score = 36.3 bits (82), Expect = 0.009
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 528 NQDFVASGSEDGKVYIWHVKRE--LPIATLSGHTRTVSCVAWNPVYHQMIASVSDDCTVR 585
Q + E ++++W++ E L + + V + +P + V + V
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 62
Query: 586 IW 587
+
Sbjct: 63 AY 64
Score = 33.3 bits (74), Expect = 0.080
Identities = 13/105 (12%), Positives = 26/105 (24%), Gaps = 9/105 (8%)
Query: 281 DHLCTKEEFPCETTQVLNDHCDEVWFCKFSPD-GLKLATGSKDTTVIIWDVDPVTFTCQH 339
H + + +PD A + + ++ V
Sbjct: 209 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG----S 264
Query: 340 RKTLEGHTLGVAY---LAWSPDSSHLLVVGPEDCHELWVWNIETE 381
+ EG +L+ G + H + V+ I E
Sbjct: 265 VLSKEGFQPTETQPRGFNVDHSGKYLIAAG-QKSHHISVYEIVGE 308
Score = 28.6 bits (62), Expect = 2.0
Identities = 5/34 (14%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 302 DEVWFCKFSPDGLKL-ATGSKDTTVIIWDVDPVT 334
+ G L A G K + ++++
Sbjct: 276 TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ 309
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 40.3 bits (93), Expect = 5e-04
Identities = 12/117 (10%), Positives = 30/117 (25%), Gaps = 22/117 (18%)
Query: 295 QVLNDHCDEVWFCKFSPDGLKLATGSKDTTVI-----------------IWDVDPVTFTC 337
++ + F G ++ K+T I V
Sbjct: 247 AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT 306
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIET--ELLRVKLNHSPE 392
+ + + + D + L +++ + + V+L+ PE
Sbjct: 307 SGPISNGHDSDAII---AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPE 360
Score = 33.8 bits (76), Expect = 0.054
Identities = 15/117 (12%), Positives = 28/117 (23%), Gaps = 20/117 (17%)
Query: 493 TQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQDF---------VASGSEDGKVYI 543
T + + L G + G F + G + DF A G V +
Sbjct: 45 TTENWVSCAGCGVTL----GHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100
Query: 544 WHVKRELPIATLSGHTRTVSC-------VAWNPVYHQMIASVSDDCTVRIWGPHLNT 593
+ LPIA + + ++ + +
Sbjct: 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 34.4 bits (77), Expect = 0.032
Identities = 18/155 (11%), Positives = 36/155 (23%), Gaps = 8/155 (5%)
Query: 297 LNDHCDEVWFCKFSPDGLKLA----TGSKDTTVIIWDVDPVTFTCQ----HRKTLEGHTL 348
+ + + +F PDG K+A GS T ++ + + G +
Sbjct: 36 IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRM 95
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFV 408
+ PD + ++ E + T +
Sbjct: 96 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIG 155
Query: 409 CGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDG 443
++ G W V D
Sbjct: 156 RNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 190
Score = 30.1 bits (66), Expect = 0.67
Identities = 34/283 (12%), Positives = 83/283 (29%), Gaps = 36/283 (12%)
Query: 309 FSPD--GLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVV- 365
+PD G ++ D +W+ D + + + + + + PD + +
Sbjct: 6 LNPDIHGDRIIFVCCDD---LWEHDLKS---GSTRKIVSNLGVINNARFFPDGRKIAIRV 59
Query: 366 ---GPEDCHELWVWNIETELLRVKLNH-----SPEDSLTSCSWNRDGTKFVCGGIRG--- 414
+ +L+ +N E ++ ++ DG +
Sbjct: 60 MRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFS 119
Query: 415 ---QFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRTYNFEHLTDSNLLQE 471
Y+ + +G + +DG+ V+ +T + T + E
Sbjct: 120 SMTCLYRVENDGINFVPLNLGPATHIL-FADGRRVIGRNTFELPHWKGYRGGTRGKIWIE 178
Query: 472 DHP--VMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQFTIHSCFGGANQ 529
+ +T + + V + + D+ + + S +
Sbjct: 179 VNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPR 238
Query: 530 DFVASG-----SEDGKVYIWHVK----RELPIATL-SGHTRTV 562
G S+ G +YI++ ++ I L S R +
Sbjct: 239 HLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRII 281
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 33.7 bits (75), Expect = 0.056
Identities = 29/241 (12%), Positives = 60/241 (24%), Gaps = 11/241 (4%)
Query: 338 QHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTS 397
++ + + AWSPD S L V E + V+ S +
Sbjct: 29 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQVASFPRHNGA 87
Query: 398 CSWNRDGTKFVCGGIRGQFYQCDIEGQVLDSWEGVRVNCLWCRSDGKSVLAADTHHRIRT 457
+++ DG+K + + V + +
Sbjct: 88 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 147
Query: 458 YNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQGQ 517
+ N+ +++ + + V + + + K T G
Sbjct: 148 AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 207
Query: 518 FTIHSCFGGANQD---------FVASGSEDGKVYIWHVKRELPIATLSGHTRTVSCVAWN 568
+ S F + +S + + A L V AW+
Sbjct: 208 QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWS 266
Query: 569 P 569
P
Sbjct: 267 P 267
Score = 29.4 bits (64), Expect = 1.0
Identities = 9/114 (7%), Positives = 26/114 (22%), Gaps = 5/114 (4%)
Query: 282 HLCTKEEFPCETTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRK 341
+ ++ + S + S I D T Q
Sbjct: 152 QVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ--- 208
Query: 342 TLEGHTLGVAYLAWSPDSSHLLVVGPED-CHELWVWNIETELLRVKLNHSPEDS 394
+ T + +P+ + ++ + L + + + +
Sbjct: 209 -VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVK 261
>d1knza_ e.34.1.1 (A:) NSP3 homodimer {Simian 11 rotavirus [TaxId:
10923]}
Length = 157
Score = 29.5 bits (66), Expect = 0.56
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 16/70 (22%)
Query: 107 DLLMQESGCK---------LDHPSAAKFRQHIMDGDW-------SKADHDLNDLEYLLDS 150
D +M +SG K +D KF I + +W +K D D+N L +L S
Sbjct: 45 DFVMDDSGVKNNPIGKAITIDQALNNKFGSAIRNRNWLADTSRPAKLDEDVNKLRMMLSS 104
Query: 151 RGDLVEMKFL 160
+G +M+ L
Sbjct: 105 KGIDQKMRVL 114
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 29.9 bits (66), Expect = 0.83
Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 20/143 (13%)
Query: 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTL---GVAYLAWSPDSSHLLV 364
K+ D + + TV +W+V+ T +EG + SPD + L
Sbjct: 23 KWISDT-EFIYREQKGTVRLWNVE----TNTSTVLIEGKKIESLRAIRYEISPDREYALF 77
Query: 365 VGPEDCHELW---------VWNIET-ELLRVKLNHSPEDSLTSCSWNRDGTKFVCGGIRG 414
+ ++ + I + + L W G + +
Sbjct: 78 S--YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENN 135
Query: 415 QFYQCDIEGQVLDSWEGVRVNCL 437
+Y + Q + + +
Sbjct: 136 IYYCAHVGKQAIRVVSTGKEGVI 158
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 29.2 bits (64), Expect = 1.2
Identities = 22/271 (8%), Positives = 63/271 (23%), Gaps = 42/271 (15%)
Query: 354 AWSPDSSHLLVVGPEDC-----HELWVWNIET---ELLRVKLNHSPEDSLTSCSWNRDGT 405
+ + +V + E+ +++T ++ + C +RD
Sbjct: 24 VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN 83
Query: 406 KFVCGGIRGQFYQCDIEGQVLDSWEGV-------RVNCLWCRSDGKSVLAADT------- 451
+ +R +G + + N +G + A
Sbjct: 84 QLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143
Query: 452 -----------HHRIRTYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWD 500
+ T D+ + ++ R L V+
Sbjct: 144 YTRSMQEKFGSIYCFTTDGQMIQVDTAF--QFPNGIAVRHMNDGRPYQLIVAETPTKKLW 201
Query: 501 LRDRILLRKFQGVT-------QGQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIA 553
D K + + + + + + + ++ P
Sbjct: 202 SYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKM 261
Query: 554 TLSGHTRTVSCVAWNPVYHQMIASVSDDCTV 584
+ S + + P + + ++ V
Sbjct: 262 RIRCPFEKPSNLHFKPQTKTIFVTEHENNAV 292
>d1k7ba_ g.12.1.1 (A:) soluble Tva ectodomain, sTva47 {Quail
(Coturnix coturnix) [TaxId: 9091]}
Length = 42
Score = 24.9 bits (54), Expect = 4.8
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 284 CTKEEFPCETTQVLNDHC-DEVWFCKFSPD 312
C +F C + C + W C PD
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPD 31
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 27.4 bits (59), Expect = 5.0
Identities = 20/203 (9%), Positives = 53/203 (26%), Gaps = 22/203 (10%)
Query: 400 WNRDGTKFVCGGIRGQFYQCDIEGQVLDSW---EGVRVNCLWCRSDGKSVLAADTHHRIR 456
++R G F+ G ++ + E + + + DG +
Sbjct: 47 FDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKS 105
Query: 457 TYNFEHLTDSNLLQEDHPVMSFTIDATDRLALLNVSTQGVHLWDLRDRILLRKFQGVTQ- 515
T T++ ++ + + + + ++G + GV
Sbjct: 106 TGGIFAATENG---DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYV 162
Query: 516 -----------GQFTIHSCFGGANQDFVASGSEDGKVYIWHVKRELPIATLSGHTRTVSC 564
++ + + + V +E + + E T+ T+
Sbjct: 163 SPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY 222
Query: 565 VAWNPVYHQMIASVSDDCTVRIW 587
SDD ++
Sbjct: 223 YFTGHEGPDSCCIDSDD---NLY 242
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2
{Yeast (Pichia pastoris) [TaxId: 4922]}
Length = 127
Score = 26.3 bits (58), Expect = 6.2
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 26 DDGAPPPLKKSRASVQASGQED 47
D+ P + +R V E+
Sbjct: 71 DEDGDLPPRNARTVVYFGEGEE 92
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 27.2 bits (60), Expect = 6.5
Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 14/88 (15%)
Query: 302 DEVWFCKFSPDGLK-LATGSKDTTVIIWDVDPVTFTCQ----HRKTLEGHT---LGVAYL 353
SPDG +A G TV + +D + + R T+ LG +
Sbjct: 258 KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHT 317
Query: 354 AWSPDSSHLLVVGPEDCHELWV--WNIE 379
+ + + + V WNI
Sbjct: 318 TFDGRGNAYTTLF----IDSQVCKWNIA 341
Score = 26.8 bits (59), Expect = 8.2
Identities = 23/195 (11%), Positives = 48/195 (24%), Gaps = 43/195 (22%)
Query: 308 KFSPDGLKLATGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGP 367
G G V+ + + + + L SPD + + G
Sbjct: 224 AAVKAGNFKTIGDSKVPVVDGRGES-----EFTRYIPVPK-NPHGLNTSPDGKYFIANGK 277
Query: 368 EDCHELWVWNIETELLRVKLNHSPEDSLT----------SCSWNRDGTKFVCGGIRGQFY 417
+ V I+ + D++ +++ G + I Q
Sbjct: 278 LSPT-VSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQ-- 334
Query: 418 QCDIEGQVLDSWEGVRVNCLWCRSDGKSVLA-ADTHHRIRTYNFEHLTDSNLLQEDHPVM 476
+ W + + D Y H H +
Sbjct: 335 --------VCKWNIADAIKHYNGDRVNYIRQKLDVQ-----YQPGHN---------HASL 372
Query: 477 SFTIDATDR-LALLN 490
+ + DA + L +L+
Sbjct: 373 TESRDADGKWLVVLS 387
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 27.1 bits (59), Expect = 6.8
Identities = 12/97 (12%), Positives = 26/97 (26%), Gaps = 14/97 (14%)
Query: 300 HCDEVWFCKFSPDGLKLATGSKDT------TVIIWDVDPVT-----FTCQHRKTLEGHTL 348
C + G + S+ + + + T GH+
Sbjct: 253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN 312
Query: 349 GVAYLAWSPDSSHLLVVGPEDCHELWVWNIETELLRV 385
V+ P S + + + L ++ + E L
Sbjct: 313 AVS---PCPWSDEWMAITDDQEGWLEIYRWKDEFLHR 346
Score = 26.7 bits (58), Expect = 8.4
Identities = 7/89 (7%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Query: 318 TGSKDTTVIIWDVDPVTFTCQHRKTLEGHTLGVAYLAWSPDSSHLLVVGPEDCHELWVWN 377
T + +D + +T R + ++++ + + ++ +
Sbjct: 11 TPPGAIFTVQFDDEKLTCKLIKRTEIPQDE-PISWMTFDHERKNIYGAA-MKKWSSFAVK 68
Query: 378 IETELLRVKLNHSPEDSLTSCSWNRDGTK 406
TE++ +H + + +
Sbjct: 69 SPTEIVHE-ASHPIGGHPRANDADTNTRA 96
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 27.0 bits (58), Expect = 8.4
Identities = 11/129 (8%), Positives = 30/129 (23%), Gaps = 1/129 (0%)
Query: 293 TTQVLNDHCDEVWFCKFSPDGLKLATGSKDTTVIIWDVDPVTFTCQ-HRKTLEGHTLGVA 351
++ + SPDG + +++ L
Sbjct: 53 ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN 112
Query: 352 YLAWSPDSSHLLVVGPEDCHELWVWNIETELLRVKLNHSPEDSLTSCSWNRDGTKFVCGG 411
W S + ++++V ED + + + + V
Sbjct: 113 NTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172
Query: 412 IRGQFYQCD 420
++ +
Sbjct: 173 YSALWWSPN 181
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.423
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,333,552
Number of extensions: 110389
Number of successful extensions: 606
Number of sequences better than 10.0: 1
Number of HSP's gapped: 370
Number of HSP's successfully gapped: 124
Length of query: 604
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 513
Effective length of database: 1,158,166
Effective search space: 594139158
Effective search space used: 594139158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.3 bits)