BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10571
(240 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
pdb|4GNK|D Chain D, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
Length = 1235
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 118/153 (77%)
Query: 80 KPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKE 139
KP+ D+ T++ E A E+S LVNY++P+ F SFE A K+N+ +EMSSF E +A L +
Sbjct: 573 KPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTK 632
Query: 140 RPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFE 199
P+EFV YNK QLSR+YP GTR DSSN+MPQ+FWN GCQLVALN+QT+D+AMQLN G+FE
Sbjct: 633 SPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFE 692
Query: 200 YNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVL 232
YN R GYLLKPEFMRR D+ FDPF E + ++
Sbjct: 693 YNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIV 725
>pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its
Effector Phospholipase C Beta 3
Length = 885
Score = 207 bits (527), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 118/153 (77%)
Query: 80 KPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKE 139
KP+ D+ T++ E A E+S LVNY++P+ F SFE A K+N+ +EMSSF E +A L +
Sbjct: 571 KPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTK 630
Query: 140 RPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFE 199
P+EFV YNK QLSR+YP GTR DSSN+MPQ+FWN GCQLVALN+QT+D+AMQLN G+FE
Sbjct: 631 SPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFE 690
Query: 200 YNQRCGYLLKPEFMRRQDRRFDPFAESTYNNVL 232
YN R GYLLKPEFMRR D+ FDPF E + ++
Sbjct: 691 YNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIV 723
>pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21
pdb|3QR1|D Chain D, Crystal Structure Of L. Pealei Plc21
Length = 813
Score = 199 bits (507), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 112/135 (82%)
Query: 98 ISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYP 157
+SALVNY+QP+HF +FE A+KK+RHYEMSS E QA LK+ P +FV+YNK QL+R+YP
Sbjct: 514 MSALVNYIQPVHFTTFEQAQKKDRHYEMSSMVETQALNKLKDNPEDFVDYNKKQLTRIYP 573
Query: 158 AGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQD 217
GTR DSSN++PQ++WNAGCQLVALN+Q D+AM +N+G+FEYN GYLLKPEFMR+ D
Sbjct: 574 KGTRVDSSNYVPQIYWNAGCQLVALNFQCFDVAMCVNLGVFEYNGCSGYLLKPEFMRKLD 633
Query: 218 RRFDPFAESTYNNVL 232
+RFDPF EST + V+
Sbjct: 634 KRFDPFTESTVDGVV 648
>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21
Length = 816
Score = 199 bits (507), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 112/135 (82%)
Query: 98 ISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIEFVNYNKHQLSRVYP 157
+SALVNY+QP+HF +FE A+KK+RHYEMSS E QA LK+ P +FV+YNK Q++R+YP
Sbjct: 514 MSALVNYIQPVHFTTFEQAQKKDRHYEMSSMVETQALNKLKDNPEDFVDYNKKQITRIYP 573
Query: 158 AGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQRCGYLLKPEFMRRQD 217
GTR DSSN++PQ++WNAGCQLVALN+Q D+AM +N+G+FEYN GYLLKPEFMR+ D
Sbjct: 574 KGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLD 633
Query: 218 RRFDPFAESTYNNVL 232
+RFDPF EST + V+
Sbjct: 634 KRFDPFTESTVDGVV 648
>pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta
2
pdb|2ZKM|X Chain X, Crystal Structure Of Phospholipase C Beta 2
Length = 799
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 111/141 (78%)
Query: 84 DKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRHYEMSSFDEKQATILLKERPIE 143
D+ T+ E A E+S+LVNY+QP F+SFE + +KNR Y +SSF E +A LL + ++
Sbjct: 528 DEGTAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQ 587
Query: 144 FVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAMQLNMGIFEYNQR 203
FV+YNK Q+SR+YP GTR DSSN+MPQ+FWNAGCQ+VALN+QTMDL MQ NM +FE+N +
Sbjct: 588 FVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQ 647
Query: 204 CGYLLKPEFMRRQDRRFDPFA 224
GYLLK EFMRR D++F+PF+
Sbjct: 648 SGYLLKHEFMRRPDKQFNPFS 668
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 73 MKLQLEGKPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRH-YEMSSFDEK 131
++ Q++ KP DK+ E+S ++ Y + +HF F + + YEM+SF E
Sbjct: 341 VRSQVQHKPKEDKLKLV------PELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSES 394
Query: 132 QATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAM 191
+A LL+E FV +N LSR+YPAG R DSSN+ P WN GCQ+VALN+QT M
Sbjct: 395 RALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEM 454
Query: 192 QLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFA 224
+ +G F+ N CGY+LKP F+R + F+ A
Sbjct: 455 DVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRA 487
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
Length = 622
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 73 MKLQLEGKPSVDKVTSAKETEAGAEISALVNYVQPIHFISFENAEKKNRH-YEMSSFDEK 131
++ Q++ KP DK+ E+S ++ Y + +HF F + + YEM+SF E
Sbjct: 339 VRSQVQHKPKEDKLKLV------PELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSES 392
Query: 132 QATILLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALNYQTMDLAM 191
+A LL+E FV +N LSR+YPAG R DSSN+ P WN GCQ+VALN+QT M
Sbjct: 393 RALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEM 452
Query: 192 QLNMGIFEYNQRCGYLLKPEFMRRQDRRFDPFA 224
+ +G F+ N CGY+LKP F+R + F+ A
Sbjct: 453 DVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRA 485
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,166,934
Number of Sequences: 62578
Number of extensions: 212385
Number of successful extensions: 322
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 315
Number of HSP's gapped (non-prelim): 7
length of query: 240
length of database: 14,973,337
effective HSP length: 96
effective length of query: 144
effective length of database: 8,965,849
effective search space: 1291082256
effective search space used: 1291082256
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)