BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10572
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M GP G+V G++H+ EL + SI N+ K + LL GRVQ VV +G+ GY
Sbjct: 89 SGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPMLLSSGRVQLVVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 AEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M GP G+V G++H+ EL + SI N+ K + LL GRVQ VV +G+ GY
Sbjct: 89 SGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPMLLSSGRVQLVVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR +F +R PY + IGY A IS+PH+HA LELL D + GA+ LD+GSG
Sbjct: 32 MLATDRSHF-SRC--NPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG L+ C + M GP G+V G++H+ EL E SI N+ K + L+ GR++ +V +G+ G+
Sbjct: 89 SGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPSLITSGRIKLIVGDGRMGFT 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYT 175
EAPYD IHV + T+PQ LLDQL PGGR+++PVG Q L DKL DG T
Sbjct: 149 EEAPYDAIHVGAAAPTVPQALLDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGST 203
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAE---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRVQ VV +G+ GY
Sbjct: 89 SGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPTLLSSGRVQLVVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M G G+V G++H+ EL + S+ N+ K + LL GRVQ VV +G+ GY
Sbjct: 89 SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG +I
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SIKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRCHYAKY---NPYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC + M GP+G+V G++H+ EL + SI N+ K + LL GRV+ +V +G+ GY
Sbjct: 89 SGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDPTLLSSGRVKLIVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLEDG 201
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRVQ VV +G+ GY
Sbjct: 89 SGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPTLLSSGRVQLVVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ + PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---SNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRV+ VV +G+ GY
Sbjct: 89 SGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLVVGDGRMGYA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 167 bits (422), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M +DR F PY IGY A IS+PH+HA LELLKD ++PG LD+GSG
Sbjct: 35 METIDRALFVPEGFT-PYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSG 93
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDK-GNSELLDQGRVQFVVWNGKHGY 119
SGYLTAC A M GPEGR G+EH+ EL +S +N+++ + L+ G + F V +G+ G+
Sbjct: 94 SGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAAALMKDGSLSFHVSDGRLGW 153
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 177
APYD IHV + IP+ LL+QL PGGRMV+PVG Q+L +IDK ADG T V
Sbjct: 154 PDAAPYDAIHVGAAAPEIPRPLLEQLKPGGRMVIPVGT--YSQDLQVIDKSADGSTSV 209
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 167 bits (422), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ + PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---SNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRV+ VV +G+ G+
Sbjct: 89 SGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLVVGDGRMGFA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTV 180
EAPYD IHV + +PQ L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVKMKP 207
Query: 181 VRGVRTNPLYRDRFQQKKY 199
+ GV PL Q ++
Sbjct: 208 LMGVIYVPLTDKEKQWSRW 226
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 163 bits (412), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M VDR F T + Y IGY IS+PH+HA L+LL+ +KPG R+LD+GSG
Sbjct: 35 MEAVDRGVFVTDR-SSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSG 93
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNID-KGNSELLDQGRVQFVVWNGKHGY 119
+GYLTAC A M G EGR GVEH+ EL SS+KNI+ S L +G + V +G+ G+
Sbjct: 94 TGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAASPFLKEGSLAVHVGDGRQGW 153
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
APYD IHV + IP+ L+DQL PGGR+V+PVG F Q+L ++DK +DG
Sbjct: 154 AEFAPYDAIHVGAAAPEIPEALIDQLKPGGRLVIPVGNIF--QDLQVVDKNSDG 205
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 147 bits (370), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 107/170 (62%), Gaps = 3/170 (1%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M VDR +F R PY ++IGY A +S+PH+HA L+ L++ + GA+ LD+GSG
Sbjct: 32 MKSVDRGDFAPRA---PYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYE 120
SGYLT C+A M G G V G+EH+ +L E S KNI K +SE L++G V + +G+ G+
Sbjct: 89 SGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHHSEQLERGNVIIIEGDGRQGFA 148
Query: 121 REAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKL 170
+APY+ IHV + +P+ L DQL GGRM++PV + Q IDK+
Sbjct: 149 EKAPYNAIHVGAASKGVPKALTDQLAEGGRMMIPVEQVDGNQVFMQIDKI 198
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 121/187 (64%), Gaps = 9/187 (4%)
Query: 4 VDRKNFF-TRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARI-LDIGSGS 61
VDRK F + V PY + + IGY A IS+PH+HA ML+LL D+I + LDIGSGS
Sbjct: 77 VDRKLFLENKNVENPYYDEPKPIGYNATISAPHMHALMLDLLADRIPMSNGVALDIGSGS 136
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYER 121
GY+TACL ++ G GRV GVEH+ EL E SI++I + +S LLD R+QF+V +G G+ +
Sbjct: 137 GYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLLD--RIQFLVGDGIKGW-K 193
Query: 122 EAPYDIIHVSPSY--FTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTT 179
+ YDII++ + + ++L+DQL GGR+VMPVG+ L ++DK DG + +
Sbjct: 194 QLKYDIIYLGAAIESLQVARELIDQLKNGGRIVMPVGKSNDFHELMVVDKNEDGIVSIKS 253
Query: 180 --VVRGV 184
VVR V
Sbjct: 254 LGVVRFV 260
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M DRK++ R PY + IG G IS+PH+HA LE L+D +KPGARILD+GSG
Sbjct: 32 MKETDRKHYSPR---NPYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSG 88
Query: 61 SGYLTACL-----AYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNG 115
SGYLTAC A + R+ G+EH EL S N++ + +LD G++ V +G
Sbjct: 89 SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 148
Query: 116 KHGYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYT 175
+ GY APY+ IHV + P +L++QL GGR+++PVG Q + DK A+G
Sbjct: 149 RKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKV 208
Query: 176 IVTTVVRGVRTNPL 189
+T ++ GV PL
Sbjct: 209 EMTRLM-GVMYVPL 221
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 2 LRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
+ ++F+ + PY + IGYG IS+PH+HA L+ L+ ++PG LDIGSGS
Sbjct: 32 MNATSRSFYCPL--SPYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGS 89
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMELAESSIKNI------DKGNSELLDQGRVQFVVWNG 115
GYL A +A M P G V G+EH+ +L E+S KN+ D+ E+ + R+Q V +G
Sbjct: 90 GYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLKDINHDEVLMEMYKEKRLQINVGDG 149
Query: 116 KHGYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
+ G + +D IHV S +PQKL+DQL G++++P+G QN+ +I+K G
Sbjct: 150 RMGTSEDEKFDAIHVGASASELPQKLVDQLKSPGKILIPIGT--YSQNIYLIEKNEQG 205
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 8/174 (4%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSR-QIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
ML+V R F + + + S IG G IS+PH+ A M ELL + PG ++L++G+
Sbjct: 34 MLKVPRHEFVPEDLRDRAYVDSPLPIGRGQTISAPHMVAIMTELLDPR--PGHKVLEVGA 91
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A +A + P+GRV VE + ELA+ + N+ K + V+ +V +G GY
Sbjct: 92 GSGYHAAVVAELVKPDGRVITVERIPELADFARNNLKKTGYDRF----VKVLVGDGTKGY 147
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
EAPYD I V+ +P+ LL+QL PGG+MV+PVG+ Q L +++K DG
Sbjct: 148 PPEAPYDRILVTAGAPDVPESLLEQLKPGGKMVIPVGDRHM-QELWLVEKTEDG 200
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 9/159 (5%)
Query: 15 NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGP 74
NE Y IGYG IS+PH+ A M ELL ++ G ++L++G+G GY A A + G
Sbjct: 43 NEAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGDKVLEVGTGCGYHAAVTAEIVGK 100
Query: 75 EGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSY 134
G+V +E++ ELAE + + + L V+ +V +G GYE+EAPYD I+V+ +
Sbjct: 101 SGKVISIEYIPELAERA-----RAILKALGYDNVEVIVGDGSKGYEKEAPYDKIYVTAAA 155
Query: 135 FTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
IP+ L++QL P GRMV+PVG+ Q L I++K G
Sbjct: 156 PDIPKPLIEQLKPRGRMVIPVGDSV--QWLIIVEKDESG 192
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R+ F + Y + IG+G IS+PH+ A M +LL ++ G ++L++G
Sbjct: 22 MSRVPRELFVPEELRPMAYEDRPLPIGHGQTISAPHMVAMMCDLLD--LREGMKVLEVGG 79
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
G GY A +A + GP G VY VE + EL E + +N+++ V ++ +G GY
Sbjct: 80 GCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERARYR-----NVSMILGDGTLGY 134
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 172
+APYD I V+ S IP+ L +QL PGGRMV+PVG Q+L ++ K D
Sbjct: 135 SEQAPYDRISVAASAPDIPEPLKEQLRPGGRMVIPVGS--YSQDLLVVTKNHD 185
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 15/181 (8%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
MLRV R+ F + Y IG+G IS+PH+ A M E +KPG ++L++G+
Sbjct: 37 MLRVPRELFVPDELRHLAYEDTPLPIGHGQTISAPHMVAMMTEYAD--LKPGMKVLEVGA 94
Query: 60 GSGYLTACLAYMAGPE-------GRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVV 112
GSGY A +A + P G VY +E + ELAE + +N+++ RV +V
Sbjct: 95 GSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLERAGY----ADRVTVIV 150
Query: 113 WNGKHGYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 172
+G GY +APYD I V+ + IP L+DQL PGG+MV+P+G+ + Q+L ++ K D
Sbjct: 151 GDGSRGYPEKAPYDRIIVTAAAPDIPGPLIDQLKPGGKMVIPIGDRYL-QHLYVVVKTRD 209
Query: 173 G 173
G
Sbjct: 210 G 210
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Query: 1 MLRVDRKNFFTRVVNEP-YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R F Y + +IG+G IS+PH A M E+L+ + G ++L+IG+
Sbjct: 50 MFRVPRHRFVPEYEQRAAYTDRPLEIGHGQTISTPHTVALMCEILE--LSEGHKVLEIGT 107
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A +A + G G +Y VE + L N + N E + V ++ NG GY
Sbjct: 108 GSGYNAAVMAELVGKTGHIYSVERIEPLV-----NFARKNLEQMGYDNVTVLLENGSMGY 162
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
R APYD I V+ + TIP+ LL+QL PGG MV+PVG+ Q L + K ++G
Sbjct: 163 PRYAPYDRIAVTCAAPTIPKALLEQLKPGGIMVIPVGD--YSQELIRVKKDSNG 214
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 25 IGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGRVYGVEHV 84
IGYG IS+PH+ A M ELL ++ G R+L+IG+G GY A A + G G V VE +
Sbjct: 53 IGYGQTISAPHMVAIMCELLD--LREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERI 110
Query: 85 MELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSYFTIPQKLLDQ 144
ELAE I K N L V +V +G GYE APYD I+V+ S IP+ LL+Q
Sbjct: 111 PELAE-----IAKRNLSALGYENVVVIVGDGSLGYEPMAPYDKIYVTASAPDIPKPLLEQ 165
Query: 145 LVPGGRMVMPVGE 157
L GG+MV+P+GE
Sbjct: 166 LKIGGKMVIPIGE 178
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M +VDRK F + E Y IGYG IS+PH+ M E L+ +K G R+L+IG+
Sbjct: 19 MNKVDRKLFVPSELQESAYLDIPLPIGYGQTISAPHMVGMMCEYLE--LKDGDRVLEIGT 76
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A ++ + G G +Y +E + EL + + K I+ LL + +V +GK G
Sbjct: 77 GSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRIN-----LLGINNITIIVGDGKEGL 131
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTT 179
E AP+D I V+ IP+KL++QL G MV+PVG + Q L +I K G I+
Sbjct: 132 EEYAPFDKITVTCYAKHIPKKLIEQLKDNGIMVIPVGNEYV-QILKLIRK--SGEKIIEE 188
Query: 180 VVRGVRTNPL 189
+ VR P+
Sbjct: 189 DLTHVRFVPM 198
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y + IG+G IS+P + +ML+LL + PG ++LD+G+GSGY +A LA + P GR
Sbjct: 78 YEDRPLPIGHGQTISAPGVVGRMLQLLDPQ--PGEKVLDVGAGSGYQSALLAELVTPGGR 135
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSYFTI 137
VY VE + ELAE + +N++K + + V G + APY I V+ +
Sbjct: 136 VYAVERIPELAEYARENLEKTGYRGVVEVVVGDG----SKGLPQHAPYHRIKVAAAAPKP 191
Query: 138 PQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
P+ L++QL PGGRMV+P+G P Q LTII+K DG
Sbjct: 192 PKPLVEQLAPGGRMVIPIGTP-DLQILTIIEKTPDG 226
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M++V R+ F + Y IG G IS+PH+ A M+E +++ G ++L++G+
Sbjct: 27 MMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHMVAYMVE--AAELRRGDKVLEVGT 84
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A +A + GPEG VY +E + ELAE + + + L V +V +G GY
Sbjct: 85 GSGYHAAVMAELVGPEGHVYTIERIPELAERARERLKA-----LGYNNVTVLVGDGSKGY 139
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 176
APYD I V+ + +P+ LL QL GG MV+PV E Q L I K +GY I
Sbjct: 140 PPAAPYDKIIVTAAAKRVPEALLKQLKVGGIMVIPVEEEPGYQVLYKIIKTPEGYVI 196
>sp|A0LM89|PIMT2_SYNFM Protein-L-isoaspartate O-methyltransferase 2 OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=pcm2 PE=3 SV=1
Length = 247
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 13/177 (7%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQ--IGYGADISSPHIHAQMLELLKDKIKPGARILDIG 58
M RV R F Y ++R IGYG IS P+I A M +LLK + + +L++G
Sbjct: 65 MARVPRHEFVP-AAERAYAYENRPLPIGYGQTISQPYIVAVMTDLLK--VGSESTVLEVG 121
Query: 59 SGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHG 118
+GSGY A LA VY +E + LAE++ + + + L V+ +G HG
Sbjct: 122 TGSGYQAAILAEFVR---SVYSIEIIEALAETAAERLKR-----LGYDNVRVRTGDGYHG 173
Query: 119 YEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYT 175
++ AP+D I V+ + IP LLDQL PGGRM++PVG PF Q L +++K G T
Sbjct: 174 WKEHAPFDGIVVTAAAGHIPPPLLDQLKPGGRMIIPVGGPFFVQQLMLVEKDEQGRT 230
>sp|Q8PW90|PIMT_METMA Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pcm PE=3 SV=1
Length = 243
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 1 MLRVDRKNFFTRVVNEP-YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
MLRV R F Y +IG+G IS+PH+ A M E+L+ + G ++L+IG+
Sbjct: 55 MLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILE--LAEGHKVLEIGA 112
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A ++ + G G +Y VE V LA + KN+ + + V ++ NG GY
Sbjct: 113 GSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKEAGYK-----NVTVLLENGSMGY 167
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVG 156
APYD I V+ + IP+ LL+QL PGG MV+PVG
Sbjct: 168 PGYAPYDRIAVTCAAPNIPETLLEQLKPGGIMVIPVG 204
>sp|Q2YCR1|PIMT1_NITMU Protein-L-isoaspartate O-methyltransferase 1 OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=pcm1
PE=3 SV=1
Length = 236
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 12/190 (6%)
Query: 1 MLRVDRKNFFTRVVN-EPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M +V+R F ++ YR IG+G IS P I A+M ELLK +K ++L+IG+
Sbjct: 54 MEKVERHRFVPAWLSIFAYRNHPLPIGHGQTISQPLIVARMTELLK--LKKDDKVLEIGT 111
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A LA +A VY +E + L N G + L V+ + +G +G+
Sbjct: 112 GSGYQAAVLAEIAK---TVYTIEIIEPLG-----NEAAGRLQSLGYDNVKTRIGDGYYGW 163
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTT 179
AP+D I V+ + +P LL QL PGGRMV+P+G PF Q L +++K DG ++ T
Sbjct: 164 PEAAPFDAILVTAAASHVPPPLLKQLKPGGRMVVPLGAPFMTQYLMLVEKQPDG-SVTTH 222
Query: 180 VVRGVRTNPL 189
+ VR PL
Sbjct: 223 QIVPVRFVPL 232
>sp|Q57636|PIMT_METJA Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pcm PE=1 SV=1
Length = 215
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
+L+V R+ F + E Y +IGYG IS+ H+ M ELL +KPG ++L+IG+
Sbjct: 29 LLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGT 86
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
G GY A A + G +G V +E + ELAE + + + K L V +V +G GY
Sbjct: 87 GCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK-----LGYDNVIVIVGDGTLGY 141
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 176
E APYD I+ + + IP+ L+ QL GG+++MPVG Q L + +K D I
Sbjct: 142 EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRYL--QRLVLAEKRGDEIII 196
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKS-RQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
MLRV R F + I + +IG+G IS+PH+ A M +LL+ + G ++L+IG+
Sbjct: 66 MLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKVLEIGA 123
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A + + G G VY VE + L + + +N+ K E V ++ +G GY
Sbjct: 124 GSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYE-----NVTVLLDDGSMGY 178
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
+ APYD I V+ + IP+ LL+QL PGG M++PVG+ Q L I K +G
Sbjct: 179 SKCAPYDRIVVTCAAPDIPEPLLEQLKPGGIMIIPVGDYI--QELVRIKKDPEG 230
>sp|Q123X2|PIMT2_POLSJ Protein-L-isoaspartate O-methyltransferase 2 OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=pcm2 PE=3 SV=1
Length = 211
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y+ + IG+G IS P+I A M +L +++PG ++L++G+GSGY A +A++A
Sbjct: 47 YQNRPLPIGHGQTISQPYIVALMTDL--ARVEPGHKVLEVGTGSGYQAAVMAHLAR---A 101
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSYFTI 137
VY +E + L + + + K L VQ + +G HG+E APYD I V+ + I
Sbjct: 102 VYTIEIIEPLGLQARQRLQK-----LGYDNVQVRLGDGYHGWEEHAPYDAILVTAAASHI 156
Query: 138 PQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGVRTNPLYRDR 193
P L+ QL GGRMV+PVG F Q L +++K DG T+ T + V PL R
Sbjct: 157 PPPLIRQLKAGGRMVIPVGAAFMVQQLMLVEKNRDG-TVSTRQILPVAFVPLTGQR 211
>sp|Q7NJY2|PIMT_GLOVI Protein-L-isoaspartate O-methyltransferase OS=Gloeobacter violaceus
(strain PCC 7421) GN=pcm PE=3 SV=2
Length = 205
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 1 MLRVDRKNF----FTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILD 56
M +V R F +TR+ Y + IG+ IS P I A M E +I PGA++L+
Sbjct: 20 MAKVPRHRFVPPPYTRLA---YEDRPLPIGHSQTISQPFIVAYMSE--AARITPGAKVLE 74
Query: 57 IGSGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGK 116
IG+GSGY A LA M VY VE V ELA+ + + +++ L V+ +G
Sbjct: 75 IGTGSGYQAAVLAEMGA---EVYTVEIVPELAKRAERTLEE-----LGYRSVRVRSGDGY 126
Query: 117 HGYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 176
G+ + AP+D I V+ + IPQ L+DQL GR+++PVG + Q +T++ + G I
Sbjct: 127 QGWPQHAPFDAIVVTAAPERIPQPLIDQLAVNGRLIVPVGTQTEDQRMTVLTRTPGG--I 184
Query: 177 VTTVVRGVRTNPLYRDRFQQ 196
V VR PL R++ Q+
Sbjct: 185 VEQKTFPVRFVPLTREKPQE 204
>sp|A3MY16|PIMT_PYRCJ Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1
Length = 207
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 15/162 (9%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQ-----IGYGADISSPHIHAQMLELLKDKIKPGARIL 55
ML+V R+ F T YR+ + + + GA IS+PH+ A M EL++ + PG +IL
Sbjct: 24 MLKVPREEFVT----PEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEPR--PGMKIL 77
Query: 56 DIGSGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNG 115
++G+GSGY A A +G+VY VE V ELA + +N+++ L G V+ +G
Sbjct: 78 EVGTGSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER----LGYLGVVEVYRGDG 133
Query: 116 KHGYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGE 157
+ G ER AP+D + V+ + IP+ L++QL GG MV+PV E
Sbjct: 134 RRGLERHAPFDAVLVTAAASEIPKALVEQLREGGVMVIPVEE 175
>sp|Q0KB67|PIMT1_CUPNH Protein-L-isoaspartate O-methyltransferase 1 OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=pcm1 PE=3 SV=1
Length = 259
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQ--IGYGADISSPHIHAQMLELLKDKIKPGARILDIG 58
M +V R F +P+ ++R IG+G IS P+I A M +L+ +KPG +L+IG
Sbjct: 77 MGQVPRHEFVPDA-QKPHAYENRPLPIGHGQTISQPYIVALMTDLMM--VKPGDTVLEIG 133
Query: 59 SGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHG 118
+GSGY A L +A VY +E + L + + + L +V V +G +G
Sbjct: 134 TGSGYQAAVLTGLAR---AVYTIEIIEPLGRHACDRLKR-----LAYRQVACKVGDGYYG 185
Query: 119 YEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVT 178
++ APYD I V+ + +P L+ QL PGGRMV+PVG F Q L +++K DG T+ T
Sbjct: 186 WDEHAPYDAIVVTAAASHVPPPLIRQLKPGGRMVIPVGAQFLTQYLLLVEKSEDG-TVST 244
Query: 179 TVVRGVRTNPL 189
+ VR PL
Sbjct: 245 RQILPVRFVPL 255
>sp|A7MTT6|PIMT_VIBHB Protein-L-isoaspartate O-methyltransferase OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=pcm PE=3 SV=1
Length = 208
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 3 RVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
R+ R++F ++ ++++ Y + IG G IS P+I A+M ELL +K + +L+IG+GS
Sbjct: 29 RLPRESFVSQAMMHQAYDNNALPIGQGQTISQPYIVAKMTELLD--LKSDSNVLEIGTGS 86
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYER 121
GY TA LA + VY VE + L + + + + LD V +G G+E
Sbjct: 87 GYQTAVLAQIVD---HVYSVERIKSLQWDAKRRLKQ-----LDIYNVSTKHGDGWLGWEA 138
Query: 122 EAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVV 181
+ P+D I V+ + ++PQ LL QL GG+M++PVGE + Q L I++ + Y ++TVV
Sbjct: 139 KGPFDAIIVTAAAESVPQALLSQLKEGGKMIIPVGE--EEQQLLKIERQGEQY--LSTVV 194
Query: 182 RGVRTNPL 189
VR PL
Sbjct: 195 EMVRFVPL 202
>sp|Q74CZ5|PIMT_GEOSL Protein-L-isoaspartate O-methyltransferase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=pcm PE=3 SV=2
Length = 207
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 1 MLRVDRKNFFTRVVN-EPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
ML+V R F + + Y IG IS P++ A M ELL+ +K ++L+IG+
Sbjct: 20 MLKVPRHVFVEEAMAAQAYSDTPLPIGEKQTISQPYMVALMTELLE--LKGKEKVLEIGT 77
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY A LA MA RVY VE + LA + K +D L V + +G G+
Sbjct: 78 GSGYQAAILAVMAD---RVYTVERIRPLALRARKALDS-----LGLLNVNIKMSDGTVGW 129
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
E EAP+D I V+ IPQ+ +DQL PGGR+V+PVG F+ Q L + K DG
Sbjct: 130 EDEAPFDAIIVTAGAPDIPQQYIDQLKPGGRLVIPVGTQFE-QVLVRVVKQEDG 182
>sp|A2SF76|PIMT_METPP Protein-L-isoaspartate O-methyltransferase OS=Methylibium
petroleiphilum (strain PM1) GN=pcm PE=3 SV=1
Length = 269
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 13/193 (6%)
Query: 1 MLRVDRKNFF-TRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGAR--ILDI 57
M V R +F T + N+ Y S IG G IS P + A+M+EL+ GAR +L+I
Sbjct: 81 MRAVPRHSFVDTALANQAYEDTSLPIGLGQTISKPSVVARMIELMLALQPAGARPRLLEI 140
Query: 58 GSGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKH 117
GSG GY A LA +A +V +E + L + + +N+ L+ G ++ V +G+
Sbjct: 141 GSGCGYQAAVLAQLAR---QVVSIERLRPLYDKARENLAP-----LNFGNLRLVYGDGRI 192
Query: 118 GYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFK-GQNLTIIDKLADGYTI 176
G+ APYD I + IPQ +DQL PGGR+V P+ + GQ L +ID+ ADG +
Sbjct: 193 GHAPNAPYDGIIAAAGGEDIPQPWIDQLGPGGRLVAPMLDARSGGQVLVVIDRHADG-NL 251
Query: 177 VTTVVRGVRTNPL 189
V ++ VR PL
Sbjct: 252 VRSLHEAVRFVPL 264
>sp|A1RSC6|PIMT_PYRIL Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=pcm PE=3 SV=1
Length = 207
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 16/174 (9%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQ-----IGYGADISSPHIHAQMLELLKDKIKPGARIL 55
ML V R+ F V YR+ + + + + A IS+PH+ A M EL++ + PG +IL
Sbjct: 24 MLAVPREEF----VMPEYRMMAYEDRPLPLFFDATISAPHMVAMMCELVEPR--PGMKIL 77
Query: 56 DIGSGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNG 115
++G+GSGY A A +G+VY +E V ELA + +NI++ L G V+ +G
Sbjct: 78 EVGTGSGYQAAVCAEAIERKGKVYTIEIVKELAIYAAQNIER----LGYWGIVEVYHGDG 133
Query: 116 KHGYEREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDK 169
K G ER AP+D I V+ + TIP +L+ QL GG +V+P+ E GQ L I K
Sbjct: 134 KKGLERHAPFDAIIVTAAARTIPSELIKQLKDGGVLVIPIEEGV-GQVLYKITK 186
>sp|B4RZG8|PIMT_ALTMD Protein-L-isoaspartate O-methyltransferase OS=Alteromonas macleodii
(strain DSM 17117 / Deep ecotype) GN=pcm1 PE=3 SV=1
Length = 211
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 13/185 (7%)
Query: 6 RKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYL 64
R++F + ++ Y+ + IG G IS P+I A+M ELL D ++L+IG+GSGY
Sbjct: 33 RESFLPDALKHKAYQNTALPIGQGQTISQPYIVAKMTELLLDSPNKPEKVLEIGTGSGYQ 92
Query: 65 TACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAP 124
TA LA + +V+ VE + L + + +++ LD + +G G+ + P
Sbjct: 93 TAILAQLF---AKVFSVERIKTLQFQAKRRMNQ-----LDLHNIAMKHGDGWKGWASKGP 144
Query: 125 YDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGV 184
YD I V+ + ++PQ L DQL GGR+++PVG + Q+L ID++ + T+ + V
Sbjct: 145 YDAIIVTAAAASLPQDLCDQLKEGGRLIIPVGN--EQQSLLCIDRIEG--ELKTSTIESV 200
Query: 185 RTNPL 189
R PL
Sbjct: 201 RFVPL 205
>sp|B6YX51|PIMT_THEON Protein-L-isoaspartate O-methyltransferase OS=Thermococcus
onnurineus (strain NA1) GN=pcm PE=3 SV=1
Length = 220
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 13/160 (8%)
Query: 14 VNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAG 73
V+EP I G IS+PH+ A MLEL +++ G +LDIG+GSG+ A A +
Sbjct: 51 VDEPLPIPG-----GQTISAPHMVAIMLEL--AELEEGMNVLDIGTGSGWNAALAAELVK 103
Query: 74 PEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPS 133
+ VY VE + EL E + KN++K RV ++ +G G+ +APYD I V+
Sbjct: 104 TD--VYTVERIPELVEFARKNLEKAGY----ADRVHVIIGDGTKGFPPKAPYDRILVAAG 157
Query: 134 YFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
+P+ L++QL PGG++++PVG Q L + KL DG
Sbjct: 158 APNVPEPLVEQLKPGGKLIIPVGSYHLWQELYEVIKLKDG 197
>sp|Q7MHQ8|PIMT_VIBVY Protein-L-isoaspartate O-methyltransferase OS=Vibrio vulnificus
(strain YJ016) GN=pcm PE=3 SV=1
Length = 208
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 15/188 (7%)
Query: 3 RVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
RV R+ F ++ ++++ Y + IG G IS P+I A+M ELL+ +K +++L+IG+GS
Sbjct: 29 RVPRECFLSQAMMHQAYDNNALPIGQGQTISQPYIVAKMTELLR--LKRDSKVLEIGTGS 86
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYER 121
GY TA LA + VY VE + L + + + + LD V +G G+E
Sbjct: 87 GYQTAVLALLVE---HVYSVERIKSLQWDAKRRLKQ-----LDIYNVSTKHGDGWLGWEN 138
Query: 122 EAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVV 181
+ P+D I V+ + ++P LL QL GGRMV+PVG Q L +I++ D + V+ V+
Sbjct: 139 KGPFDAIIVTAAAESVPPVLLQQLNDGGRMVLPVGT--DEQQLILIERQKDQF--VSQVI 194
Query: 182 RGVRTNPL 189
V PL
Sbjct: 195 EAVNFVPL 202
>sp|Q8DC56|PIMT_VIBVU Protein-L-isoaspartate O-methyltransferase OS=Vibrio vulnificus
(strain CMCP6) GN=pcm PE=3 SV=1
Length = 208
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 15/188 (7%)
Query: 3 RVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
RV R+ F ++ ++++ Y + IG G IS P+I A+M ELL+ +K +++L+IG+GS
Sbjct: 29 RVPRECFLSQAMMHQAYDNNALPIGQGQTISQPYIVAKMTELLR--LKRDSKVLEIGTGS 86
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYER 121
GY TA LA + VY VE + L + + + + LD V +G G+E
Sbjct: 87 GYQTAVLALLVE---HVYSVERIKSLQWDAKRRLKQ-----LDIYNVSTKHGDGWLGWEN 138
Query: 122 EAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVV 181
+ P+D I V+ + ++P LL QL GGRMV+PVG Q L +I++ D + V+ V+
Sbjct: 139 KGPFDAIIVTAAAESVPPVLLQQLNDGGRMVLPVGT--DEQQLILIERQKDQF--VSQVI 194
Query: 182 RGVRTNPL 189
V PL
Sbjct: 195 EAVNFVPL 202
>sp|Q0VQD1|PIMT_ALCBS Protein-L-isoaspartate O-methyltransferase OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=pcm PE=3 SV=1
Length = 220
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 12/179 (6%)
Query: 13 VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMA 72
+ ++ Y + IG+G IS P + A+M ELL K KP ++L+IG+G GY TA LA
Sbjct: 50 LAHQAYDDTALPIGHGQTISQPWVVARMTELLIAKGKP-RKVLEIGTGCGYQTAVLAPFC 108
Query: 73 GPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSP 132
+Y VE + L + + K + + L +VQ +G G+ EAP+D I +
Sbjct: 109 D---ELYSVERIRPLQDLARKRLLQ-----LGLAKVQLKHADGGFGWTAEAPFDAILAAC 160
Query: 133 SYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGVRTNPLYR 191
+ IP+ LL QL GGR+VMPVG + Q LT++D+ DG + + VR P R
Sbjct: 161 ARVDIPEGLLSQLADGGRLVMPVGGD-RQQVLTVVDR--DGDQFRSQTLDSVRFVPFQR 216
>sp|Q87LQ6|PIMT_VIBPA Protein-L-isoaspartate O-methyltransferase OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=pcm PE=3 SV=1
Length = 208
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 15/185 (8%)
Query: 6 RKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYL 64
R++F ++ ++++ Y + IG G IS P+I A+M ELL+ ++ + +L+IG+GSGY
Sbjct: 32 RESFVSQAMMHQAYDNNALPIGQGQTISQPYIVARMTELLE--LQRASNVLEIGTGSGYQ 89
Query: 65 TACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAP 124
TA LA + VY VE + L + + + + LD V +G G+E + P
Sbjct: 90 TAVLAQIVD---HVYSVERIKSLQWEAKRRLKQ-----LDIYNVSTKHGDGWLGWETKGP 141
Query: 125 YDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGV 184
+D I V+ + IPQ LL QL GG+MV+PVG+ Q L I++ D Y ++TVV V
Sbjct: 142 FDAIIVTAAAEVIPQALLSQLKDGGKMVIPVGDA--EQQLLRIERKGDEY--LSTVVEMV 197
Query: 185 RTNPL 189
R PL
Sbjct: 198 RFVPL 202
>sp|Q8ZYN0|PIMT_PYRAE Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=pcm PE=3 SV=1
Length = 205
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
Query: 28 GADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGRVYGVEHVMEL 87
GA IS+PH+ A M EL++ + PG +IL++G+GSGY A A +GR+Y +E V EL
Sbjct: 52 GATISAPHMVAMMCELIEPR--PGMKILEVGTGSGYHAAVCAEAIEKKGRIYTIEIVKEL 109
Query: 88 AESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSYFTIPQKLLDQLVP 147
A + +N+++ L G V+ +GK G E+ AP+D I V+ + IP L+ QL
Sbjct: 110 AVFAAQNLER----LGYWGVVEVYHGDGKKGLEKHAPFDAIIVTAAADVIPPALIRQLKD 165
Query: 148 GGRMVMPVGEPFKGQNLTIIDKLAD 172
GG MV+PV E GQ L + K D
Sbjct: 166 GGVMVIPVEERL-GQVLYKVVKRGD 189
>sp|O26915|PIMT_METTH Protein-L-isoaspartate O-methyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pcm PE=3 SV=1
Length = 217
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 1 MLRVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R+ F ++ Y IG G IS+PH+ A + E+L ++PG ++L+IG+
Sbjct: 27 MERVPREEFVPEDEMHRAYMDMPLPIGEGQTISAPHMVAMIAEILD--LEPGMKVLEIGT 84
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
G GY A +A + GPEG +Y VE + L E + K + L + + +G G+
Sbjct: 85 GCGYNAAVIAEIIGPEGHLYTVERIGILYERARKKLRS-----LGYDNITVIHGDGSQGF 139
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKL-ADGY 174
EAPY I+V+ + IP L+ QL GG++++PVG Q L +I++ AD Y
Sbjct: 140 ADEAPYSRIYVTAAAPYIPDPLMKQLEIGGKLLIPVGSDKFYQELVLIERTSADDY 195
>sp|Q0W2W0|PIMT_UNCMA Protein-L-isoaspartate O-methyltransferase OS=Uncultured
methanogenic archaeon RC-I GN=pcm PE=3 SV=1
Length = 188
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 1 MLRVDRKNFFTRVVN-EPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R+ F V + Y IG+ IS+P + A M + L I+ G ++L+IG+
Sbjct: 1 MDRVPREEFVPEDVRPDAYYDTPLPIGHNQTISAPSMVAIMCQALD--IREGNKVLEIGT 58
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
G GY A +A +AG G VY VE + ELA+ + + + L V+ + +G G
Sbjct: 59 GLGYHAAVMAVLAGASGVVYTVERIPELADMARSVLSR-----LGFDNVKVFLRDGTEGL 113
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTT 179
APYD I V+ + +PQ L+DQL GR+V+PVG F Q L +++K G I+TT
Sbjct: 114 PDFAPYDRISVAAAAPDVPQPLVDQLKDPGRLVIPVGRYF--QQLMLVEK--KGGQIITT 169
Query: 180 VVRGVRTNPL 189
GV PL
Sbjct: 170 DKGGVAFVPL 179
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 14 VNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAG 73
V+EP I + G IS+PH+ A MLE+ +KPG +L++G+GSG+ A +A +
Sbjct: 52 VDEPLPIPA-----GQTISAPHMVAIMLEIAD--LKPGMNVLEVGTGSGWNAALIAEIV- 103
Query: 74 PEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPS 133
+G VY +E + EL E + +N+++ + V ++ +G G+ ++PYD I V+
Sbjct: 104 -KGDVYSIERIPELVEFAKRNLERAGVK-----NVHVILGDGSKGFPPKSPYDAIIVTAG 157
Query: 134 YFTIPQKLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
IP+ L++QL PGG++++PVG Q L + K DG
Sbjct: 158 APEIPKPLVEQLKPGGKLIIPVGSYHLWQELLEVIKREDG 197
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 25 IGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGRVYGVEHV 84
IGY IS+PH+ A M +LLK I G IL+IGSGSGY A +A +AG G+VY VE +
Sbjct: 43 IGYDQTISAPHMVAIMCDLLK--ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERI 100
Query: 85 MELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSYFTIPQKLLDQ 144
EL + + N+++ V V +G G APYD I V+ +P L +Q
Sbjct: 101 PELVDLARNNLERAG-----YSNVTVVHDDGSCGLPEHAPYDRIAVTSVAPEVPPPLREQ 155
Query: 145 LVPGGRMVMPVGEPFKGQNLTIIDKLADG 173
L G MV+PVG + Q L ++ K + G
Sbjct: 156 LSKNGIMVIPVGTQY--QTLVVVKKDSKG 182
>sp|A8FX24|PIMT2_SHESH Protein-L-isoaspartate O-methyltransferase 2 OS=Shewanella
sediminis (strain HAW-EB3) GN=pcm2 PE=3 SV=1
Length = 244
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 10/152 (6%)
Query: 25 IGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGRVYGVEHV 84
IG G IS P+I A M ELL+ + R+L+IG+GSGY A L+ +A V+ +E
Sbjct: 81 IGEGQTISQPYIVALMTELLE--LTGSERVLEIGTGSGYQAAVLSQVAK---EVFTIEIK 135
Query: 85 MELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGYEREAPYDIIHVSPSYFTIPQKLLDQ 144
+L + K +D L +Q +G G+ +EAP+D I ++ + +P LL Q
Sbjct: 136 EKLCTKAGKLLDS-----LGYTNIQARCGDGYFGWNKEAPFDAIMITAAVDHVPPPLLAQ 190
Query: 145 LVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 176
L GGR+V+P+G PF QNL ++ + D Y +
Sbjct: 191 LKDGGRLVLPLGNPFSYQNLVLVTRKGDDYRV 222
>sp|B8E0T1|PIMT_DICTD Protein-L-isoaspartate O-methyltransferase OS=Dictyoglomus turgidum
(strain Z-1310 / DSM 6724) GN=pcm PE=3 SV=1
Length = 220
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 1 MLRVDRKNFF-TRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
+L+V R F + ++ Y ++ IGY IS P+I A M E L +K ++L+IG+
Sbjct: 36 ILKVPRHIFVPSEYLDLAYENEALPIGYEQTISQPYIVALMTEALD--LKGDEKVLEIGT 93
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVVWNGKHGY 119
GSGY TA LA +A VY +E + EL+E + K I +LL V F V +G G+
Sbjct: 94 GSGYQTAILAELAK---EVYTIERIRELSEEAKKRI-----KLLGYSNVYFKVGDGTLGW 145
Query: 120 EREAPYDIIHVSPSYFTIPQKLLDQLVPGGRMVMPVG 156
E +PYD I V+ + + IP L +QL GG MV+P+G
Sbjct: 146 EEFSPYDRIIVTAASYDIPNPLKEQLKDGGVMVIPIG 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,678,889
Number of Sequences: 539616
Number of extensions: 3672856
Number of successful extensions: 13203
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 303
Number of HSP's that attempted gapping in prelim test: 11996
Number of HSP's gapped (non-prelim): 907
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)